Citrus Sinensis ID: 024659

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260----
Protein Sequence
MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSSFLWLVP
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccEEEEEccccEEEEEEccccccccHHHHHHHHHHHHHccccccccEEcccccccEEEEEEEEcccccHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccEEEEccccccHHHHHccccccccccEEHHHHHHHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccEEcHHHHHHHHccccHHHHHHHcccccccEEEEEEcccccEEEEEEEccccccccHHHHHHHHHHHHHHcHcHHEEEEEEEccccEEEEEEEcccccHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccEEEEcccHHHEEcccccccHHcHccccEccccccEEEEccccccHHHHHcccccccccHHHHHHHHHHHHccccccccccHHHHHccc
Coil and Loop (DISEMBL)
mgcecsklsaccsgseygeaapeaqdveneekpgvdnvpvFCEYSIETLRTATSGFAMENIVsehgekapnvvykgkLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVaeympndtlAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHdlnayrivfdddvnprlscfglmknsrdgrsystnlaftppeylrtgrvtpesvMYSFGTLLLDLlsgkhippshvssflwlvp
Flexible Loop (DISEMBL)
mgcecsklsaccsgseyGEAAPEAQDveneekpgvdnVPVFCEYSIETLRTATSGFAMENIVSehgekapnvvyKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLmknsrdgrsystnlaftppeylrtgrvTPESVMYSFGTLLLDLLSGKHippshvssflwlvp
Low Complexity Region (SEG)
MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSSFLWLVP
Disordered region (IsUnstruct)
***********************************DNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSSFLWL**
Disordered Region (DISOPRED)
****************************************FCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSSFLWLVP
Disordered Region (DISEMBL)
********SACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSSFLWLVP
Disordered Region (DISPRO)
**************************************PVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSSFLWLVP
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSSFLWLVP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	264	2.2.26 [Sep-21-2011]
Q9FHD7	487	Probable serine/threonine	yes	no	0.969	0.525	0.796	1e-123
Q944A7	512	Probable serine/threonine	no	no	0.829	0.427	0.716	3e-95
Q7XJT7	465	Probable inactive recepto	no	no	0.882	0.501	0.462	5e-59
P43298	942	Probable receptor protein	no	no	0.765	0.214	0.377	7e-34
Q06548	410	Protein kinase APK1A, chl	no	no	0.924	0.595	0.333	1e-32
Q9SFT7	414	Serine/threonine-protein	no	no	0.848	0.541	0.369	3e-32
O49839	426	Protein kinase 2A, chloro	no	no	0.787	0.488	0.346	1e-31
O64784	821	G-type lectin S-receptor-	no	no	0.776	0.249	0.350	2e-31
O64778	807	G-type lectin S-receptor-	no	no	0.821	0.268	0.339	3e-31
O49840	426	Protein kinase 2B, chloro	no	no	0.787	0.488	0.342	4e-31

>sp|Q9FHD7|Y5126_ARATH Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1

 Score =  439 bits (1130), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 204/256 (79%), Positives = 229/256 (89%)

Query: 1   MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
           MGCE SKLSA C  SE G + P+   ++ E +   +++P F E+SIET+R ATSGFA EN
Sbjct: 1   MGCEVSKLSALCCVSESGRSNPDVTGLDEEGRGESNDLPQFREFSIETIRNATSGFAAEN 60

Query: 61  IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
           IVSEHGE+APNVVYKGKLENQ RIAVKRFNR +WPD+RQFLEEA+AVGQLRN R+ANLLG
Sbjct: 61  IVSEHGERAPNVVYKGKLENQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLG 120

Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
           CC E +ERLL+AE+MPN+TLAKHLFHWE+QPMKWAMRLRVALHIA+ALEYCTSK RALYH
Sbjct: 121 CCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYH 180

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
           DLNAYR++FDDD NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGT
Sbjct: 181 DLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240

Query: 241 LLLDLLSGKHIPPSHV 256
           LLLDLLSGKHIPPSH 
Sbjct: 241 LLLDLLSGKHIPPSHA 256

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q944A7|Y4523_ARATH Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1

 Score =  347 bits (891), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 157/219 (71%), Positives = 190/219 (86%)

Query: 38  VPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA 97
           +P F E+S   L+ AT+ F+ +NIVSE GEKAPN+VYKG+L+N+  IAVK+F + AWP+ 
Sbjct: 55  IPSFSEFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMAWPEP 114

Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR 157
           +QF EEA  VG+LR+ RLANL+G CC+GDERLLVAE+MPNDTLAKHLFHWE Q ++WAMR
Sbjct: 115 KQFAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMR 174

Query: 158 LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA 217
           LRV  +IAEAL+YC+++ R LYHDLNAYR++FD+D +PRLSCFGLMKNSRDG+SYSTNLA
Sbjct: 175 LRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLA 234

Query: 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV 256
           +TPPEYLR GRVTPESV YSFGT+LLDLLSGKHIPPSH 
Sbjct: 235 YTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHA 273

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q7XJT7|SSP_ARATH Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1

 Score =  228 bits (580), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 118/255 (46%), Positives = 165/255 (64%), Gaps = 22/255 (8%)

Query: 1   MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
           MGC C  LS     S          D  +E + G    P   ++S   L+TAT+ F+ EN
Sbjct: 1   MGC-CYSLS-----STVDPVQDHTTDASSEPRNGGGEDPPLTKFSFSALKTATNHFSPEN 54

Query: 61  IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
           IVS+   +  +VV+KG+L+N   +A+KRFN  AW D + FLEEA+ VG+LR++RL NL+G
Sbjct: 55  IVSD---QTSDVVFKGRLQNGGFVAIKRFNNMAWSDPKLFLEEAQRVGKLRHKRLVNLIG 111

Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
            CC+GD+R LVA++M NDTLAK LF  + Q M W++RLRVA  +AEAL+YC +   A Y+
Sbjct: 112 YCCDGDKRFLVADFMANDTLAKRLFQRKYQTMDWSIRLRVAYFVAEALDYCNTAGFASYN 171

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
           +L+AY+++FD+D +  LSCFGLMK   + +             + TG V PE+V+Y FGT
Sbjct: 172 NLSAYKVLFDEDGDACLSCFGLMKEINNDQ-------------ITTGSVNPENVIYRFGT 218

Query: 241 LLLDLLSGKHIPPSH 255
           +L++LLSGK IPPSH
Sbjct: 219 VLVNLLSGKQIPPSH 233

Probable inactive protein kinase that activates the YODA MAP kinase cascade, regulating the asymmetric first division, and thus embryo polarity. Acts as an adapter at the plasma membrane, possibly recruiting an activator.

Arabidopsis thaliana (taxid: 3702)

>sp|P43298|TMK1_ARATH Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=2 SV=1

 Score =  144 bits (363), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 82/217 (37%), Positives = 129/217 (59%), Gaps = 15/217 (6%)

Query: 45  SIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRS--AWPDARQFLE 102
           SI+ LR+ T+ F+ +NI+   G     VVYKG+L +  +IAVKR      A     +F  
Sbjct: 577 SIQVLRSVTNNFSSDNIL---GSGGFGVVYKGELHDGTKIAVKRMENGVIAGKGFAEFKS 633

Query: 103 EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMRLR 159
           E   + ++R+R L  LLG C +G+E+LLV EYMP  TL++HLF W     +P+ W  RL 
Sbjct: 634 EIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLT 693

Query: 160 VALHIAEALEYC--TSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-SYSTNL 216
           +AL +A  +EY    + +  ++ DL    I+  DD+  +++ FGL++ + +G+ S  T +
Sbjct: 694 LALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRI 753

Query: 217 AFT----PPEYLRTGRVTPESVMYSFGTLLLDLLSGK 249
           A T     PEY  TGRVT +  +YSFG +L++L++G+
Sbjct: 754 AGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGR 790

Probable receptor.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q06548|APK1A_ARATH Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1

 Score =  140 bits (352), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 133/270 (49%), Gaps = 26/270 (9%)

Query: 3   CECSKLSACCSGSEYGEAAPEAQDVENEEKPGVD----NVPVFCEYSIETLRTATSGFAM 58
            E S  S      + G    +A  V     P  +      P    +S   L++AT  F  
Sbjct: 11  AESSGASTKYDAKDIGSLGSKASSVSVRPSPRTEGEILQSPNLKSFSFAELKSATRNFRP 70

Query: 59  ENIVSEHGEKAPNVVYKGKLENQ----------FRIAVKRFNRSAWPDARQFLEEARAVG 108
           ++++   GE     V+KG ++ +            IAVK+ N+  W   +++L E   +G
Sbjct: 71  DSVL---GEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLG 127

Query: 109 QLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWET--QPMKWAMRLRVALHIAE 166
           Q  +R L  L+G C E + RLLV E+MP  +L  HLF      QP+ W +RL+VAL  A+
Sbjct: 128 QFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAK 187

Query: 167 ALEYCTSKE-RALYHDLNAYRIVFDDDVNPRLSCFGLMKNS--RDGRSYSTNL----AFT 219
            L +  S E R +Y D     I+ D + N +LS FGL K+    D    ST +     + 
Sbjct: 188 GLAFLHSSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYA 247

Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLLSGK 249
            PEYL TG +T +S +YSFG +LL+LLSG+
Sbjct: 248 APEYLATGHLTTKSDVYSFGVVLLELLSGR 277

Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SFT7|Y3707_ARATH Serine/threonine-protein kinase At3g07070 OS=Arabidopsis thaliana GN=At3g07070 PE=2 SV=1

 Score =  139 bits (349), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/238 (36%), Positives = 128/238 (53%), Gaps = 14/238 (5%)

Query: 25  QDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRI 84
           Q+  N+E   V N      +S   L TAT  F  E ++   GE     VYKGKLE    I
Sbjct: 48  QNKNNDEDKEVTNNIAAQTFSFRELATATKNFRQECLI---GEGGFGRVYKGKLEKTGMI 104

Query: 85  -AVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKH 143
            AVK+ +R+     ++F+ E   +  L ++ L NL+G C +GD+RLLV EYM   +L  H
Sbjct: 105 VAVKQLDRNGLQGNKEFIVEVLMLSLLHHKHLVNLIGYCADGDQRLLVYEYMSRGSLEDH 164

Query: 144 LFHW--ETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVNPRLSC 199
           L     +  P+ W  R+R+AL  A  LEY   K     +Y DL A  I+ D + N +LS 
Sbjct: 165 LLDLTPDQIPLDWDTRIRIALGAAMGLEYLHDKANPPVIYRDLKAANILLDGEFNAKLSD 224

Query: 200 FGLMKNS--RDGRSYSTNL----AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI 251
           FGL K     D +  S+ +     +  PEY RTG++T +S +YSFG +LL+L++G+ +
Sbjct: 225 FGLAKLGPVGDKQHVSSRVMGTYGYCAPEYQRTGQLTTKSDVYSFGVVLLELITGRRV 282

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O49839|APK2A_ARATH Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=2 SV=1

 Score =  136 bits (343), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 123/228 (53%), Gaps = 20/228 (8%)

Query: 39  PVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQ----------FRIAVKR 88
           P    ++   L+ AT  F  +N++   GE     V+KG ++              +AVK+
Sbjct: 69  PNLKAFTFNELKNATKNFRQDNLL---GEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQ 125

Query: 89  FNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE 148
                +   +++L E   +GQL +  L  L+G C EG+ RLLV E+MP  +L  HLF   
Sbjct: 126 LKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLFRRG 185

Query: 149 TQPMKWAMRLRVALHIAEALEYC-TSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN-- 205
            QP+ WA+R++VA+  A+ L +   +K + +Y D  A  I+ D D N +LS FGL K   
Sbjct: 186 AQPLTWAIRMKVAVGAAKGLTFLHEAKSQVIYRDFKAANILLDADFNAKLSDFGLAKAGP 245

Query: 206 SRDGRSYSTNL----AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK 249
           + D    ST +     +  PEY+ TGR+T +S +YSFG +LL+L+SG+
Sbjct: 246 TGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGR 293

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64784|Y1136_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61360 OS=Arabidopsis thaliana GN=At1g61360 PE=2 SV=1

 Score =  135 bits (341), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 122/217 (56%), Gaps = 12/217 (5%)

Query: 44  YSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEE 103
           + I  L+TAT+ F+   ++++ G+     VYKGKL++   IAVKR   S+     +F+ E
Sbjct: 486 FEIHDLQTATNNFS---VLNKLGQGGFGTVYKGKLQDGKEIAVKRLTSSSVQGTEEFMNE 542

Query: 104 ARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ-PMKWAMRLRVAL 162
            + + +L++R L  LLGCC +G+E+LLV EYM N +L   +F  + +  + WA R  +  
Sbjct: 543 IKLISKLQHRNLLRLLGCCIDGEEKLLVYEYMVNKSLDIFIFDLKKKLEIDWATRFNIIQ 602

Query: 163 HIAEALEYC--TSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK------NSRDGRSYST 214
            IA  L Y    S  R ++ DL    I+ D+ +NP++S FGL +      +     S   
Sbjct: 603 GIARGLLYLHRDSFLRVVHRDLKVSNILLDEKMNPKISDFGLARLFHGNQHQDSTGSVVG 662

Query: 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI 251
            L +  PEY  TG  + +S +YSFG L+L++++GK I
Sbjct: 663 TLGYMSPEYAWTGTFSEKSDIYSFGVLMLEIITGKEI 699

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64778|Y1142_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61420 OS=Arabidopsis thaliana GN=At1g61420 PE=2 SV=2

 Score =  135 bits (341), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/233 (33%), Positives = 131/233 (56%), Gaps = 16/233 (6%)

Query: 29  NEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKR 88
           N+ KP   +VP    + + T++TAT+ F++ N   + G+     VYKGKL++   IAVKR
Sbjct: 469 NDLKP--QDVPGLDFFDMHTIQTATNNFSISN---KLGQGGFGPVYKGKLQDGKEIAVKR 523

Query: 89  FNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE 148
            + S+     +F+ E   + +L+++ L  +LGCC EG+E+LL+ E+M N++L   LF   
Sbjct: 524 LSSSSGQGKEEFMNEIVLISKLQHKNLVRILGCCIEGEEKLLIYEFMLNNSLDTFLFDSR 583

Query: 149 TQ-PMKWAMRLRVALHIAEALEYC--TSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205
            +  + W  RL +   IA  + Y    S  + ++ DL    I+ D+ +NP++S FGL + 
Sbjct: 584 KRLEIDWPKRLDIIQGIARGIHYLHRDSHLKVIHRDLKVSNILLDEKMNPKISDFGLARM 643

Query: 206 SRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI 251
            + G  Y  N       L +  PEY  TG  + +S +YSFG L+L+++SG+ I
Sbjct: 644 YQ-GTEYQDNTRRVVGTLGYMAPEYAWTGMFSEKSDIYSFGVLMLEIISGEKI 695

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O49840|APK2B_ARATH Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1

 Score =  135 bits (339), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 123/228 (53%), Gaps = 20/228 (8%)

Query: 39  PVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQ----------FRIAVKR 88
           P    ++   L+ AT  F  ++++ E G      V+KG ++              +AVK+
Sbjct: 66  PNLKAFTFNELKNATRNFRPDSLLGEGGF---GYVFKGWIDGTTLTASKPGSGIVVAVKK 122

Query: 89  FNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE 148
                +   +++L E   +GQL +  L  L+G C EG+ RLLV E+MP  +L  HLF   
Sbjct: 123 LKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLFRRG 182

Query: 149 TQPMKWAMRLRVALHIAEALEYC-TSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN-- 205
            QP+ WA+R++VA+  A+ L +   +K + +Y D  A  I+ D + N +LS FGL K   
Sbjct: 183 AQPLTWAIRMKVAIGAAKGLTFLHDAKSQVIYRDFKAANILLDAEFNSKLSDFGLAKAGP 242

Query: 206 SRDGRSYSTNL----AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK 249
           + D    ST +     +  PEY+ TGR+T +S +YSFG +LL+LLSG+
Sbjct: 243 TGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGR 290

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	264
255537473	273	receptor protein kinase, putative [Ricin	0.973	0.941	0.856	1e-128
224071868	487	predicted protein [Populus trichocarpa]	0.984	0.533	0.830	1e-127
224058519	488	predicted protein [Populus trichocarpa]	0.984	0.532	0.807	1e-125
225454188	491	PREDICTED: probable serine/threonine-pro	0.984	0.529	0.815	1e-125
225426412	488	PREDICTED: probable serine/threonine-pro	0.984	0.532	0.819	1e-124
297805526	487	kinase family protein [Arabidopsis lyrat	0.969	0.525	0.800	1e-122
356520418	491	PREDICTED: probable serine/threonine-pro	0.965	0.519	0.807	1e-122
224127648	491	predicted protein [Populus trichocarpa]	0.965	0.519	0.803	1e-121
15237604	487	putative serine/threonine-protein kinase	0.969	0.525	0.796	1e-121
356504529	491	PREDICTED: probable serine/threonine-pro	0.965	0.519	0.796	1e-120

>gi|255537473|ref|XP_002509803.1| receptor protein kinase, putative [Ricinus communis] gi|223549702|gb|EEF51190.1| receptor protein kinase, putative [Ricinus communis]

 Score =  462 bits (1190), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 220/257 (85%), Positives = 238/257 (92%)

Query: 1   MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
           MGCECSKLSACC  SE+  + PE Q+  NEEK  VD++P F E++IETL+ ATSGFA+EN
Sbjct: 1   MGCECSKLSACCWSSEFDGSVPEDQNEGNEEKNEVDDLPAFREFTIETLKMATSGFAVEN 60

Query: 61  IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
           IVSEHGEKAPNVVYKGKLENQ RIAVKRFNRSAWPDARQFLEEARAVG LRN RLANLLG
Sbjct: 61  IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRSAWPDARQFLEEARAVGLLRNHRLANLLG 120

Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
           CCCEGDERLLVAE+MPNDTLAKHLFHWETQPMKWAMRLRVAL++A+ALEYCT K RALYH
Sbjct: 121 CCCEGDERLLVAEFMPNDTLAKHLFHWETQPMKWAMRLRVALYLAQALEYCTGKGRALYH 180

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
           DLNAYR++FDD+ NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESVMYSFGT
Sbjct: 181 DLNAYRVIFDDEGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240

Query: 241 LLLDLLSGKHIPPSHVS 257
           LLLDLLSGKHIPPSH+S
Sbjct: 241 LLLDLLSGKHIPPSHLS 257

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224071868|ref|XP_002303586.1| predicted protein [Populus trichocarpa] gi|222841018|gb|EEE78565.1| predicted protein [Populus trichocarpa]

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 216/260 (83%), Positives = 235/260 (90%)

Query: 1   MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
           MGCECSKLS CC  S+Y  + PE ++  NEEK  +D++P F EY+IETLR ATSGF++EN
Sbjct: 1   MGCECSKLSKCCWSSDYNGSVPEDRNEVNEEKSELDDLPAFREYNIETLRMATSGFSVEN 60

Query: 61  IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
           IVSEHGEKAPNVVYKGKLENQ R+AVKRFNRSAWPDARQFLEEARAVGQLRN RLANLLG
Sbjct: 61  IVSEHGEKAPNVVYKGKLENQRRVAVKRFNRSAWPDARQFLEEARAVGQLRNHRLANLLG 120

Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
           CC EGDERLLVAE+MPNDTLAKHLFHWET+PMKWAMRLRVALH+A+ALEYCTSK RALYH
Sbjct: 121 CCGEGDERLLVAEFMPNDTLAKHLFHWETKPMKWAMRLRVALHLAQALEYCTSKGRALYH 180

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
           DLNAYRIVFDD+ NPRLSCFGLMKN RDG+SYSTNLAFTPPEYLRTGRV PESV+YSFGT
Sbjct: 181 DLNAYRIVFDDEGNPRLSCFGLMKNRRDGKSYSTNLAFTPPEYLRTGRVIPESVIYSFGT 240

Query: 241 LLLDLLSGKHIPPSHVSSFL 260
           LLLDLLSGKHIPPSH    +
Sbjct: 241 LLLDLLSGKHIPPSHALDLI 260

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224058519|ref|XP_002299534.1| predicted protein [Populus trichocarpa] gi|222846792|gb|EEE84339.1| predicted protein [Populus trichocarpa]

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 210/260 (80%), Positives = 232/260 (89%)

Query: 1   MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
           MGCECSKL+ CC  S+Y  + PE  + + EE+  +D++P F EY+IETLR ATSGF++EN
Sbjct: 1   MGCECSKLTKCCWSSDYNGSVPEDHNEDKEERSELDDLPAFREYNIETLRMATSGFSVEN 60

Query: 61  IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
           IVSEHGEKAPNVVYKGKLENQ RI VKRFNRS+WPDARQFLEEAR VGQLRN RLANLLG
Sbjct: 61  IVSEHGEKAPNVVYKGKLENQRRIVVKRFNRSSWPDARQFLEEARTVGQLRNHRLANLLG 120

Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
           CCCEGDERLLV+E+MPNDTLAKHLFHWETQPMKWAMRLRVALH+A+ALEYC SK RALYH
Sbjct: 121 CCCEGDERLLVSEFMPNDTLAKHLFHWETQPMKWAMRLRVALHLAQALEYCASKGRALYH 180

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
           DLNAYR+VFDD+ NPRLSCFGLMKNS DG+SYSTNLAFTPPEYLRTGRVT ESV+YSFGT
Sbjct: 181 DLNAYRVVFDDEGNPRLSCFGLMKNSIDGKSYSTNLAFTPPEYLRTGRVTAESVIYSFGT 240

Query: 241 LLLDLLSGKHIPPSHVSSFL 260
           LLLDLLSGKHIPPSH    +
Sbjct: 241 LLLDLLSGKHIPPSHALDLI 260

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454188|ref|XP_002272416.1| PREDICTED: probable serine/threonine-protein kinase At5g41260 [Vitis vinifera] gi|297745267|emb|CBI40347.3| unnamed protein product [Vitis vinifera]

 Score =  452 bits (1164), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 212/260 (81%), Positives = 232/260 (89%)

Query: 1   MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
           MGC+CSKL+ CC  S++  +  EA DV+N EK  VD +PVFCEY+ E L+ ATSGFA+EN
Sbjct: 1   MGCQCSKLAPCCWDSQFKGSVLEAPDVDNGEKSEVDYLPVFCEYTFEQLKNATSGFAVEN 60

Query: 61  IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
           IVSEHGEKAPNVVYKGKLENQ RIAVKRFNR AWPDARQF EEARAVGQLRN RLANLLG
Sbjct: 61  IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRVAWPDARQFSEEARAVGQLRNHRLANLLG 120

Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
           CCCE +ERLLVAEYMPN+TLAKHLFHWETQPMKWAMRLRV LH+A+ALEYCT + RALYH
Sbjct: 121 CCCEDNERLLVAEYMPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTGRGRALYH 180

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
           DLNAYRI+FD+D NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGT
Sbjct: 181 DLNAYRILFDEDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240

Query: 241 LLLDLLSGKHIPPSHVSSFL 260
           LLLDLLSGKHIPPSH    +
Sbjct: 241 LLLDLLSGKHIPPSHALDLI 260

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426412|ref|XP_002270065.1| PREDICTED: probable serine/threonine-protein kinase At5g41260 [Vitis vinifera] gi|297742525|emb|CBI34674.3| unnamed protein product [Vitis vinifera]

 Score =  450 bits (1157), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 213/260 (81%), Positives = 228/260 (87%)

Query: 1   MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
           MGC+CSK   CC  SE      E   VENEE    D++P F EY+I+ LR ATSGFA EN
Sbjct: 1   MGCQCSKFWVCCWDSEQKGLVVEPPSVENEENSEADDLPAFHEYTIDQLRMATSGFAAEN 60

Query: 61  IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
           IVSEHGEKAPNVVYKGKLENQ RIAVKRFN+SAWPDARQFLEEAR+VGQLRN RLANLLG
Sbjct: 61  IVSEHGEKAPNVVYKGKLENQRRIAVKRFNKSAWPDARQFLEEARSVGQLRNHRLANLLG 120

Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
           CC EGDERLLVAE+MPNDTLAKHLFHWETQPMKWAMRLRVAL++A+ALEYCTSK RALYH
Sbjct: 121 CCSEGDERLLVAEFMPNDTLAKHLFHWETQPMKWAMRLRVALYLAQALEYCTSKGRALYH 180

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
           DLNAYRIVFDDD +PRLSCFG+MKNSRDG+SYSTNLAFTPPEYLRTGRVTPESVMYSFGT
Sbjct: 181 DLNAYRIVFDDDGDPRLSCFGMMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240

Query: 241 LLLDLLSGKHIPPSHVSSFL 260
           LLLDLLSGKHIPPSH    +
Sbjct: 241 LLLDLLSGKHIPPSHALDLI 260

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297805526|ref|XP_002870647.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297316483|gb|EFH46906.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 205/256 (80%), Positives = 230/256 (89%)

Query: 1   MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
           MGCE SKLSA C  SE G + P+   ++ E +   +++P F E+SIET+R ATSGFA EN
Sbjct: 1   MGCEVSKLSALCCVSESGRSNPDVTGLDEEGRGESNDLPQFREFSIETIRNATSGFAAEN 60

Query: 61  IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
           IVSEHGE+APNVVYKGKLENQ RIAVKRFNR +WPD+RQFLEEA+AVGQLRN R+ANLLG
Sbjct: 61  IVSEHGERAPNVVYKGKLENQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLG 120

Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
           CC EG+ERLL+AE+MPN+TLAKHLFHWE+QPMKWAMRLRVALHIA+ALEYCTSK RALYH
Sbjct: 121 CCYEGEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYH 180

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
           DLNAYR++FDDD NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGT
Sbjct: 181 DLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240

Query: 241 LLLDLLSGKHIPPSHV 256
           LLLDLLSGKHIPPSH 
Sbjct: 241 LLLDLLSGKHIPPSHA 256

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520418|ref|XP_003528859.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Glycine max]

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 206/255 (80%), Positives = 227/255 (89%)

Query: 1   MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
           MG +CS+L  CC  S+   +  E  D E E+   V N P F EY++E L+ ATSGFA+EN
Sbjct: 1   MGIQCSRLIPCCVDSQVKASVIETPDAEIEDSSEVSNWPTFREYTLEQLKNATSGFAVEN 60

Query: 61  IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
           IVSEHGEKAPNVVYKGKLENQ RIAVKRFNR+AWPDARQFLEEAR+VGQLRN+RLANLLG
Sbjct: 61  IVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDARQFLEEARSVGQLRNQRLANLLG 120

Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
           CCCEG+ERLLVAEYMPN+TLAKHLFHWETQPMKWAMRLRV LH+A+ALEYCTSK RALYH
Sbjct: 121 CCCEGEERLLVAEYMPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
           DLNAYR++FD+D NPRLS FGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGT
Sbjct: 181 DLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240

Query: 241 LLLDLLSGKHIPPSH 255
           LLLDLLSGKHIPPSH
Sbjct: 241 LLLDLLSGKHIPPSH 255

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127648|ref|XP_002320126.1| predicted protein [Populus trichocarpa] gi|222860899|gb|EEE98441.1| predicted protein [Populus trichocarpa]

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 205/255 (80%), Positives = 227/255 (89%)

Query: 1   MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
           MG +C+KL+ CC  S++  A  E   V NEEK  V+++P F E++ E L+ ATSGFA+EN
Sbjct: 1   MGSQCTKLTPCCLDSQFKAAVVEVPSVGNEEKSEVNDLPTFREFTFEQLKNATSGFAVEN 60

Query: 61  IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
           IVSEHGEKAPNVVYKGKLENQ RIAVKRFNR AWPDARQFLEEAR+VGQLRN RL NLLG
Sbjct: 61  IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDARQFLEEARSVGQLRNNRLVNLLG 120

Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
           CCCEGDERLLVAE+MPN+TLAKHLFHWETQP+KWAMRLRV LH+AEALEYCTSK RALYH
Sbjct: 121 CCCEGDERLLVAEFMPNETLAKHLFHWETQPIKWAMRLRVVLHLAEALEYCTSKGRALYH 180

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
           DLNAYRI+FD+D NP+LS FGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGT
Sbjct: 181 DLNAYRILFDEDGNPKLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240

Query: 241 LLLDLLSGKHIPPSH 255
           LLLD LSGKHIPPSH
Sbjct: 241 LLLDHLSGKHIPPSH 255

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15237604|ref|NP_198942.1| putative serine/threonine-protein kinase [Arabidopsis thaliana] gi|75333858|sp|Q9FHD7.1|Y5126_ARATH RecName: Full=Probable serine/threonine-protein kinase At5g41260 gi|10177770|dbj|BAB11102.1| protein kinase-like [Arabidopsis thaliana] gi|115311489|gb|ABI93925.1| At5g41260 [Arabidopsis thaliana] gi|332007275|gb|AED94658.1| putative serine/threonine-protein kinase [Arabidopsis thaliana]

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 204/256 (79%), Positives = 229/256 (89%)

Query: 1   MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
           MGCE SKLSA C  SE G + P+   ++ E +   +++P F E+SIET+R ATSGFA EN
Sbjct: 1   MGCEVSKLSALCCVSESGRSNPDVTGLDEEGRGESNDLPQFREFSIETIRNATSGFAAEN 60

Query: 61  IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
           IVSEHGE+APNVVYKGKLENQ RIAVKRFNR +WPD+RQFLEEA+AVGQLRN R+ANLLG
Sbjct: 61  IVSEHGERAPNVVYKGKLENQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLG 120

Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
           CC E +ERLL+AE+MPN+TLAKHLFHWE+QPMKWAMRLRVALHIA+ALEYCTSK RALYH
Sbjct: 121 CCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYH 180

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
           DLNAYR++FDDD NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGT
Sbjct: 181 DLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240

Query: 241 LLLDLLSGKHIPPSHV 256
           LLLDLLSGKHIPPSH 
Sbjct: 241 LLLDLLSGKHIPPSHA 256

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356504529|ref|XP_003521048.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Glycine max]

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 203/255 (79%), Positives = 226/255 (88%)

Query: 1   MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
           MG +CS+L  CC  S+   +  E  D E E+     N P F E+++E L+ ATSGFA+EN
Sbjct: 1   MGIQCSRLIPCCVDSQVKASVIETPDAEIEDSSEASNWPTFREFTLEQLKNATSGFAVEN 60

Query: 61  IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
           IVSEHGEKAPNVVYKGKLENQ RIAVKRFNR+AWPDARQFLEE+R+VGQLRN+RLANLLG
Sbjct: 61  IVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDARQFLEESRSVGQLRNQRLANLLG 120

Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
           CCCEG+ERLLVAEYMPN+TLAKHLFHWETQPMKWAMRLRV LH+A+ALEYCTSK RALYH
Sbjct: 121 CCCEGEERLLVAEYMPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
           DLNAYR++FD+D NPRLS FGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGT
Sbjct: 181 DLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240

Query: 241 LLLDLLSGKHIPPSH 255
           LLLDLLSGKHIPPSH
Sbjct: 241 LLLDLLSGKHIPPSH 255

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	264
TAIR|locus:2155115	487	BSK8 "brassinosteroid-signalin	0.965	0.523	0.8	1.6e-111
TAIR|locus:2031279	487	BSK7 "brassinosteroid-signalin	0.962	0.521	0.804	7e-109
TAIR|locus:2127118	489	BSK3 "brassinosteroid-signalin	0.962	0.519	0.772	1.3e-107
TAIR|locus:2154538	489	BSK5 "brassinosteroid-signalin	0.950	0.513	0.745	3e-101
TAIR|locus:2198160	483	BSK4 "brassinosteroid-signalin	0.954	0.521	0.725	5.6e-100
TAIR|locus:2084475	490	BSK6 "brassinosteroid-signalin	0.950	0.512	0.707	2.9e-96
TAIR|locus:2122058	512	BSK1 "brassinosteroid-signalin	0.840	0.433	0.711	1.8e-87
TAIR|locus:2142315	489	BSK2 "brassinosteroid-signalin	0.950	0.513	0.628	2.4e-85
TAIR|locus:2083499	477	BSK9 "brassinosteroid-signalin	0.863	0.477	0.671	5e-83
TAIR|locus:2150074	499	BSK10 "brassinosteroid-signali	0.962	0.509	0.611	5.2e-81

TAIR|locus:2155115 BSK8 "brassinosteroid-signaling kinase 8" [Arabidopsis thaliana (taxid:3702)]

 Score = 1101 (392.6 bits), Expect = 1.6e-111, P = 1.6e-111
 Identities = 204/255 (80%), Positives = 229/255 (89%)

Query:     1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
             MGCE SKLSA C  SE G + P+   ++ E +   +++P F E+SIET+R ATSGFA EN
Sbjct:     1 MGCEVSKLSALCCVSESGRSNPDVTGLDEEGRGESNDLPQFREFSIETIRNATSGFAAEN 60

Query:    61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
             IVSEHGE+APNVVYKGKLENQ RIAVKRFNR +WPD+RQFLEEA+AVGQLRN R+ANLLG
Sbjct:    61 IVSEHGERAPNVVYKGKLENQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLG 120

Query:   121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
             CC E +ERLL+AE+MPN+TLAKHLFHWE+QPMKWAMRLRVALHIA+ALEYCTSK RALYH
Sbjct:   121 CCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYH 180

Query:   181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
             DLNAYR++FDDD NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGT
Sbjct:   181 DLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240

Query:   241 LLLDLLSGKHIPPSH 255
             LLLDLLSGKHIPPSH
Sbjct:   241 LLLDLLSGKHIPPSH 255

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

TAIR|locus:2031279 BSK7 "brassinosteroid-signaling kinase 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 1076 (383.8 bits), Expect = 7.0e-109, P = 7.0e-109
 Identities = 206/256 (80%), Positives = 226/256 (88%)

Query:     1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDN-VPVFCEYSIETLRTATSGFAME 59
             MGCE SKL A C  S+  E +       +E++ G  N +P F E+SIETLR ATSGFA E
Sbjct:     1 MGCEVSKLCAFCCVSD-PEGSNHGVTGLDEDRRGEGNDLPQFREFSIETLRNATSGFATE 59

Query:    60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             NIVSEHGEKAPNVVYKGKL+NQ RIAVKRFNR AWPD+RQFLEEA+AVGQLRN R+ANLL
Sbjct:    60 NIVSEHGEKAPNVVYKGKLDNQRRIAVKRFNRKAWPDSRQFLEEAKAVGQLRNYRMANLL 119

Query:   120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
             GCC EG+ERLLVAE+MPN+TLAKHLFHWE+QPMKWAMRLRVALHIA+ALEYCT K RALY
Sbjct:   120 GCCYEGEERLLVAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTGKGRALY 179

Query:   180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFG 239
             HDLNAYR++FDDD NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESVMYS+G
Sbjct:   180 HDLNAYRVLFDDDSNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVMYSYG 239

Query:   240 TLLLDLLSGKHIPPSH 255
             TLLLDLLSGKHIPPSH
Sbjct:   240 TLLLDLLSGKHIPPSH 255

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2127118 BSK3 "brassinosteroid-signaling kinase 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
 Identities = 197/255 (77%), Positives = 224/255 (87%)

Query:     1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
             MG +CS LS CC  + +  A  EA DV+N E   + +VP F EY++E L+ ATSGFA+E 
Sbjct:     1 MGGQCSSLS-CCRNTSHKTAVLEAPDVDNGESSEITDVPNFREYTLEQLKAATSGFAVEY 59

Query:    61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
             IVSEHGEKAPNVVYKGKLENQ +IAVKRF R AWPD+RQFLEEAR+VGQLR+ R+ANLLG
Sbjct:    60 IVSEHGEKAPNVVYKGKLENQKKIAVKRFTRMAWPDSRQFLEEARSVGQLRSERMANLLG 119

Query:   121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
             CCCEGDERLLVAE+MPN+TLAKHLFHWETQPMKW MRLRV L++A+ALEYCTSK R LYH
Sbjct:   120 CCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWTMRLRVVLYLAQALEYCTSKGRTLYH 179

Query:   181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
             DLNAYR++FD++ NPRLS FGLMKNSRDG+SYSTNLAFTPPEYLRTGR+TPESV+YSFGT
Sbjct:   180 DLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITPESVIYSFGT 239

Query:   241 LLLDLLSGKHIPPSH 255
             LLLDLLSGKHIPPSH
Sbjct:   240 LLLDLLSGKHIPPSH 254

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0016020 "membrane" evidence=IDA

GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IMP

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2154538 BSK5 "brassinosteroid-signaling kinase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 1004 (358.5 bits), Expect = 3.0e-101, P = 3.0e-101
 Identities = 190/255 (74%), Positives = 217/255 (85%)

Query:     1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
             MG  CSKLS C   +       EA D++N    G D++P F E+S + LR AT GF+ ++
Sbjct:     1 MGPRCSKLSLCWWPTHLKSTHNEASDLDN----GTDDLPSFTEFSFDQLRAATCGFSTDS 56

Query:    61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
             IVSEHG KAPNVVYKG+LE+   IAVKRFNRSAWPD RQFLEEA+AVGQLRN RLANL+G
Sbjct:    57 IVSEHGVKAPNVVYKGRLEDDRWIAVKRFNRSAWPDTRQFLEEAKAVGQLRNERLANLIG 116

Query:   121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
              CCEGDERLLVAE+MP +TL+KHLFHW++QPMKW+MRLRVAL++A+ALEYC+SK RALYH
Sbjct:   117 FCCEGDERLLVAEFMPFETLSKHLFHWDSQPMKWSMRLRVALYLAQALEYCSSKGRALYH 176

Query:   181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
             DLNAYRI+FD D NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRV PESV+YSFGT
Sbjct:   177 DLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGT 236

Query:   241 LLLDLLSGKHIPPSH 255
             LLLDLLSGKHIPPSH
Sbjct:   237 LLLDLLSGKHIPPSH 251

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2198160 BSK4 "brassinosteroid-signaling kinase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 992 (354.3 bits), Expect = 5.6e-100, P = 5.6e-100
 Identities = 185/255 (72%), Positives = 218/255 (85%)

Query:     1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
             MG + SK+  CCS   +   A EA DVEN+E   V+ V  F EYS+E L+ ATS FA+EN
Sbjct:     1 MGGQSSKIGTCCS---HKTTALEAPDVENKENGEVNGVHSFREYSLEQLKIATSCFALEN 57

Query:    61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
             +VSEHGE APNVVY+GKLEN  +IA+KRF+ +AWPD RQFLEEAR VGQLR++R+ANLLG
Sbjct:    58 VVSEHGETAPNVVYQGKLENHMKIAIKRFSGTAWPDPRQFLEEARLVGQLRSKRMANLLG 117

Query:   121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
              CCEG ERLLVAE+MPN+TLAKHLFHW+T+PMKWAMRLRVAL+I+EALEYC++    LYH
Sbjct:   118 YCCEGGERLLVAEFMPNETLAKHLFHWDTEPMKWAMRLRVALYISEALEYCSNNGHTLYH 177

Query:   181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
             DLNAYR++FD++ NPRLS FGLMKNSRDG+SYSTNLAFTPPEYLRTGR+T ESV+YSFGT
Sbjct:   178 DLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITAESVIYSFGT 237

Query:   241 LLLDLLSGKHIPPSH 255
             LLLDLL+GKHIPPSH
Sbjct:   238 LLLDLLTGKHIPPSH 252

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2084475 BSK6 "brassinosteroid-signaling kinase 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 957 (341.9 bits), Expect = 2.9e-96, P = 2.9e-96
 Identities = 181/256 (70%), Positives = 214/256 (83%)

Query:     1 MGCECSKLSACCSGSEYGEAAP-EAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAME 59
             MG  CSK S C   S +  A+  E+ D+EN  K      P F E+ +E L++AT GF+ +
Sbjct:     1 MGARCSKFSFCLFPSHFKSASVLESPDIENGGKVW----PTFKEFKLEQLKSATGGFSSD 56

Query:    60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             NIVSEHGEKAPNVVY+G+L++   IAVKRFNR AW D RQFL+EA+AVG LR+ RLANL+
Sbjct:    57 NIVSEHGEKAPNVVYRGRLDDGRLIAVKRFNRLAWADHRQFLDEAKAVGSLRSDRLANLI 116

Query:   120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
             GCC EG+ERLLVAE+MP++TLAKHLFHWE  PMKWAMRLRVAL +A+ALEYC++K RALY
Sbjct:   117 GCCFEGEERLLVAEFMPHETLAKHLFHWENNPMKWAMRLRVALCLAQALEYCSNKGRALY 176

Query:   180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFG 239
             HDLNAYR++FD D NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV++SFG
Sbjct:   177 HDLNAYRVLFDKDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVFSFG 236

Query:   240 TLLLDLLSGKHIPPSH 255
             T+LLDL+SGKHIPPSH
Sbjct:   237 TVLLDLMSGKHIPPSH 252

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2122058 BSK1 "brassinosteroid-signaling kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
 Identities = 158/222 (71%), Positives = 191/222 (86%)

Query:    34 GVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSA 93
             G   +P F E+S   L+ AT+ F+ +NIVSE GEKAPN+VYKG+L+N+  IAVK+F + A
Sbjct:    51 GGGGIPSFSEFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMA 110

Query:    94 WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMK 153
             WP+ +QF EEA  VG+LR+ RLANL+G CC+GDERLLVAE+MPNDTLAKHLFHWE Q ++
Sbjct:   111 WPEPKQFAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIE 170

Query:   154 WAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS 213
             WAMRLRV  +IAEAL+YC+++ R LYHDLNAYR++FD+D +PRLSCFGLMKNSRDG+SYS
Sbjct:   171 WAMRLRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYS 230

Query:   214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH 255
             TNLA+TPPEYLR GRVTPESV YSFGT+LLDLLSGKHIPPSH
Sbjct:   231 TNLAYTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSH 272

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006499 "N-terminal protein myristoylation" evidence=RCA

TAIR|locus:2142315 BSK2 "brassinosteroid-signaling kinase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
 Identities = 161/256 (62%), Positives = 203/256 (79%)

Query:     1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDN-VPVFCEYSIETLRTATSGFAME 59
             MGC  SK +   S  +   +AP   +  N ++  VD  +  F E+ +  LR AT+GF+  
Sbjct:     1 MGCLHSKTANLPSSDD--PSAPNKPESVNGDQ--VDQEIQNFKEFELNELRKATNGFSPS 56

Query:    60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
              IVSE GEKAPNVVY+GKLE    +A+KRF+R +WPDA+QF+ EA  VG+LRN+R+ +L+
Sbjct:    57 CIVSEGGEKAPNVVYRGKLEGNHLVAIKRFSRQSWPDAQQFVVEATGVGKLRNKRIVSLI 116

Query:   120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
             GCC EGDERLLVAEYMPNDTL+KHLFHWE QP+ W MR+R+A +IAEAL+YC  + R +Y
Sbjct:   117 GCCAEGDERLLVAEYMPNDTLSKHLFHWEKQPLPWDMRVRIADYIAEALDYCNIENRKIY 176

Query:   180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFG 239
             HDLNAYRI+FD++ +PRLS FGLMKNSRDG+SYSTNLA+TPPE+LRTGRV PESV++S+G
Sbjct:   177 HDLNAYRILFDEEGDPRLSTFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIFSYG 236

Query:   240 TLLLDLLSGKHIPPSH 255
             T+LLDLLSGKHIPPSH
Sbjct:   237 TILLDLLSGKHIPPSH 252

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IDA

TAIR|locus:2083499 BSK9 "brassinosteroid-signaling kinase 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
 Identities = 153/228 (67%), Positives = 183/228 (80%)

Query:    28 ENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVK 87
             +N+E+      P F E+S+E LR AT GF+ +NIVSEH E+ PN+VYKG+L +  +IAVK
Sbjct:    13 DNKEEDEGSTCPNFLEFSLEQLRVATDGFSADNIVSEHNERVPNIVYKGQLNDGRKIAVK 72

Query:    88 RFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW 147
             RF R +WPD+ +F+EEA+AVG+ R+  +ANL+GCC EG ERLLVAEYMPN+TLAKHLFHW
Sbjct:    73 RFQRLSWPDSLEFIEEAQAVGRCRSEHMANLIGCCSEGHERLLVAEYMPNETLAKHLFHW 132

Query:   148 ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207
             E +PMKW MRLRVALH A ALEYC      LYHDLN YRI+FD   NPRLSCFGLMK SR
Sbjct:   133 EKRPMKWEMRLRVALHTATALEYCNDWGIDLYHDLNTYRILFDKVGNPRLSCFGLMKCSR 192

Query:   208 DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH 255
             +G+SYSTNLAF PPEYLR G V PESV +SFGTLLLDL+SG+HIPP+H
Sbjct:   193 EGKSYSTNLAFAPPEYLRLGTVIPESVTFSFGTLLLDLMSGRHIPPNH 240

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2150074 BSK10 "brassinosteroid-signaling kinase 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 813 (291.2 bits), Expect = 5.2e-81, P = 5.2e-81
 Identities = 159/260 (61%), Positives = 190/260 (73%)

Query:     1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDN----VP-VFCEYSIETLRTATSG 55
             MGC C K S   S S     +    D+EN  +   D+     P +F E+S+E LR AT G
Sbjct:     1 MGCICFK-SWRRSSSSPSITSTVIDDLENVREYDADDDGGHYPLIFREFSLEQLRIATDG 59

Query:    56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL 115
             F+  NIVSEH +  PN+VYKGKL +  RIAVKRF R +WPD  +F+ EA+AVG+LR+  +
Sbjct:    60 FSAGNIVSEHNDSVPNIVYKGKLGDGRRIAVKRFQRLSWPDPFEFINEAQAVGRLRSEHM 119

Query:   116 ANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
             ANL+GCCC+ +ERLLVAEYMPN TLAKHLFHWE +PMKW MRL+VALH A ALEYC  K 
Sbjct:   120 ANLIGCCCDDNERLLVAEYMPNGTLAKHLFHWEKRPMKWEMRLKVALHTARALEYCNDKG 179

Query:   176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVM 235
               LYHDLN YRI+FD    P+LSCFGLMKNS +G+ YSTNLAF PPEYLR G V  ESV 
Sbjct:   180 IDLYHDLNPYRIMFDKTGIPKLSCFGLMKNSHEGKIYSTNLAFAPPEYLRLGTVIAESVT 239

Query:   236 YSFGTLLLDLLSGKHIPPSH 255
             +SFGTLLLDL+SG+HIPP+H
Sbjct:   240 FSFGTLLLDLMSGRHIPPNH 259

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FHD7	Y5126_ARATH	2, ., 7, ., 1, 1, ., 1	0.7968	0.9696	0.5256	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_III1037 hypothetical protein (487 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	264
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-24
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	3e-19
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	3e-19
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	7e-18
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	4e-17
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	5e-17
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	3e-16
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-14
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	2e-13
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	2e-13
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	6e-13
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	1e-12
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	2e-12
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	4e-12
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	8e-12
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	8e-12
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	9e-12
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	2e-11
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	3e-11
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	6e-11
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	6e-11
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	1e-10
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	2e-10
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	3e-10
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	3e-10
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	1e-09
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	1e-09
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	1e-09
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-09
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-09
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	3e-09
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	4e-09
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	7e-09
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	1e-08
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	6e-08
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	8e-08
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	2e-07
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	3e-07
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	4e-07
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	5e-07
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	6e-07
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	7e-07
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	1e-06
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	2e-06
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	2e-06
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	3e-06
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	1e-05
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	2e-05
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	2e-05
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	2e-05
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	3e-05
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	3e-05
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	3e-05
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	4e-05
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	5e-05
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	5e-05
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	6e-05
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	6e-05
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	8e-05
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	8e-05
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	1e-04
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	1e-04
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	1e-04
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	1e-04
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	1e-04
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	2e-04
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	3e-04
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	4e-04
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	4e-04
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	4e-04
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	5e-04
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	6e-04
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	8e-04
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	9e-04
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	0.001
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	0.001
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	0.001
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	0.001
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	0.001
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	0.002
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	0.002
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	0.002
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	0.002
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	0.002

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 97.3 bits (243), Expect = 1e-24
 Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 12/183 (6%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERL 129
            VY  +  +   ++A+K   +       +  L E   + +L +  +  L G   + +   
Sbjct: 8   TVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLY 67

Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRI- 187
           LV EY    +L   L   E   +     LR+ L I E LEY  S    + H DL    I 
Sbjct: 68  LVMEYCEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENIL 124

Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYST----NLAFTPPEYLR-TGRVTPESVMYSFGTLL 242
           +  D+   +L+ FGL K     +S         A+  PE L   G  + +S ++S G +L
Sbjct: 125 LDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVIL 184

Query: 243 LDL 245
            +L
Sbjct: 185 YEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 84.0 bits (208), Expect = 3e-19
 Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 4/181 (2%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V  G    Q ++AVK     +   A+ FL EA  +  LR+  L  LLG   +G+   +V 
Sbjct: 22  VMLGDYRGQ-KVAVKCLKDDS-TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79

Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
           EYM   +L  +L       +  A +L  AL + E +EY   K   ++ DL A  ++  +D
Sbjct: 80  EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN-FVHRDLAARNVLVSED 138

Query: 193 VNPRLSCFGLMKNSRDGRSYST-NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI 251
           +  ++S FGL K +  G+      + +T PE LR  + + +S ++SFG LL ++ S   +
Sbjct: 139 LVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 198

Query: 252 P 252
           P
Sbjct: 199 P 199

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 83.8 bits (208), Expect = 3e-19
 Identities = 60/202 (29%), Positives = 93/202 (46%), Gaps = 22/202 (10%)

Query: 72  VVYKGKL-----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
            VYKG L       +  +AVK     A     + FL EAR + +L +  +  LLG C E 
Sbjct: 14  EVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE 73

Query: 126 DERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH- 180
           +  ++V EYMP     D L K+      + +  +  L  AL IA  +EY  SK     H 
Sbjct: 74  EPLMIVMEYMPGGDLLDYLRKN----RPKELSLSDLLSFALQIARGMEYLESKN--FIHR 127

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVM 235
           DL A   +  +++  ++S FGL ++  D   Y          +  PE L+ G+ T +S +
Sbjct: 128 DLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDV 187

Query: 236 YSFGTLLLDLLSGKHIPPSHVS 257
           +SFG LL ++ +    P   +S
Sbjct: 188 WSFGVLLWEIFTLGEEPYPGMS 209

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 80.3 bits (199), Expect = 7e-18
 Identities = 59/202 (29%), Positives = 91/202 (45%), Gaps = 23/202 (11%)

Query: 72  VVYKGKLE-----NQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
            VYKGKL+      +  +AVK     A     + FL EAR + +L +  +  LLG C E 
Sbjct: 14  EVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVKLLGVCTEE 73

Query: 126 DERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH- 180
           +   +V EYM        L K+        +  +  L  AL IA  +EY  SK     H 
Sbjct: 74  EPLYIVMEYMEGGDLLSYLRKN-----RPKLSLSDLLSFALQIARGMEYLESKN--FIHR 126

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVM 235
           DL A   +  +++  ++S FGL ++  D   Y          +  PE L+ G+ T +S +
Sbjct: 127 DLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGKFTSKSDV 186

Query: 236 YSFGTLLLDLLSGKHIPPSHVS 257
           +SFG LL ++ +    P   +S
Sbjct: 187 WSFGVLLWEIFTLGEQPYPGMS 208

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 78.0 bits (193), Expect = 4e-17
 Identities = 59/189 (31%), Positives = 88/189 (46%), Gaps = 19/189 (10%)

Query: 72  VVYKGKL----ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGD 126
            VYKGKL         +AVK     A  + R  FL+EAR + +L +  +  LLG C E +
Sbjct: 10  EVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEE 69

Query: 127 ERLLVAEYMPNDTLAKHL-------FHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
              LV EYM    L  +L          E   +     L  A+ IA+ +EY  SK + ++
Sbjct: 70  PLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK-KFVH 128

Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPES 233
            DL A   +  +D+  ++S FGL ++  D   Y         + +  PE L+ G  T +S
Sbjct: 129 RDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKS 188

Query: 234 VMYSFGTLL 242
            ++SFG LL
Sbjct: 189 DVWSFGVLL 197

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 77.9 bits (193), Expect = 5e-17
 Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 16/194 (8%)

Query: 72  VVYKGKL-----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
            VYKG L       + ++AVK     A  + R+ FLEEA  + +L +  +  LLG C +G
Sbjct: 14  EVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLGVCTQG 73

Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNA 184
           +   +V EYMP   L   L     + +     L++AL IA+ +EY  SK     H DL A
Sbjct: 74  EPLYIVTEYMPGGDLLDFL-RKHGEKLTLKDLLQMALQIAKGMEYLESKN--FVHRDLAA 130

Query: 185 YRIVFDDDVNPRLSCFGLMKN-SRDGRSYSTNLAFTP-----PEYLRTGRVTPESVMYSF 238
              +  +++  ++S FGL ++   D           P     PE L+ G+ T +S ++SF
Sbjct: 131 RNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSF 190

Query: 239 GTLLLDLLSGKHIP 252
           G LL ++ +    P
Sbjct: 191 GVLLWEIFTLGEQP 204

Length = 258

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 75.6 bits (186), Expect = 3e-16
 Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 11/188 (5%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VYKG L+    +AVK    +  PD ++ FL+EA  + Q  +  +  L+G C +     +V
Sbjct: 11  VYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIV 70

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E +P  +L   L   + + +     L+++L  A  +EY  SK   ++ DL A   +  +
Sbjct: 71  MELVPGGSLLTFLRKKKNR-LTVKKLLQMSLDAAAGMEYLESKN-CIHRDLAARNCLVGE 128

Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           +   ++S FG M    +G  Y+ +       + +T PE L  GR T ES ++S+G LL +
Sbjct: 129 NNVLKISDFG-MSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWE 187

Query: 245 LLSGKHIP 252
             S    P
Sbjct: 188 TFSLGDTP 195

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 71.1 bits (175), Expect = 1e-14
 Identities = 51/195 (26%), Positives = 78/195 (40%), Gaps = 13/195 (6%)

Query: 72  VVYKGKLEN-QFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
            VYK K +     +AVK   +        +    E R + +L +  +  L+    + D  
Sbjct: 14  TVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDKDHL 73

Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRI 187
            LV EY     L  +L      P+      ++AL I   LEY  S    + H DL    I
Sbjct: 74  YLVMEYCEGGDLFDYLS--RGGPLSEDEAKKIALQILRGLEYLHS--NGIIHRDLKPENI 129

Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGR-VTPESVMYSFGTLL 242
           + D++   +++ FGL K      S  T    TP    PE L  G    P+  ++S G +L
Sbjct: 130 LLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVIL 189

Query: 243 LDLLSGKHIPPSHVS 257
            +LL+GK        
Sbjct: 190 YELLTGKPPFSGENI 204

Length = 260

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 67.7 bits (165), Expect = 2e-13
 Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 6/183 (3%)

Query: 66  GEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG 125
           GE     V +G+   Q ++AVK  N      A+ FLEE   + +L ++ L  LLG     
Sbjct: 15  GEGEFGAVLQGEYTGQ-KVAVK--NIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILH- 70

Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
           +   +V E M    L   L       +     L+ +L +AE +EY  SK + ++ DL A 
Sbjct: 71  NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK-KLVHRDLAAR 129

Query: 186 RIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
            I+  +D   ++S FGL +  S    +    + +T PE L+  + + +S ++S+G LL +
Sbjct: 130 NILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWE 189

Query: 245 LLS 247
           + S
Sbjct: 190 VFS 192

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 67.9 bits (166), Expect = 2e-13
 Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 37/220 (16%)

Query: 61  IVSEHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNR 113
           +  E GE A   V+ G+  +      +  +AVK    +A  DAR+ F  EA  +   ++ 
Sbjct: 9   LKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHE 68

Query: 114 RLANLLGCCCEGDERLLVAEYMPNDTLAKHL------------FHWETQPMKWAMRLRVA 161
            +    G C EGD  ++V EYM +  L K L                   +  +  L++A
Sbjct: 69  NIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIA 128

Query: 162 LHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------ 215
           + IA  + Y  S +  ++ DL     +   D+  ++  FG+   SRD   Y+T+      
Sbjct: 129 VQIASGMVYLAS-QHFVHRDLATRNCLVGYDLVVKIGDFGM---SRD--VYTTDYYRVGG 182

Query: 216 -----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GK 249
                + + PPE +   + T ES ++SFG +L ++ + GK
Sbjct: 183 HTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGK 222

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 66.7 bits (163), Expect = 6e-13
 Identities = 46/184 (25%), Positives = 92/184 (50%), Gaps = 5/184 (2%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V++G  +N+ R+A+K          + F +E +A+ +LR++ L +L   C  G+   ++ 
Sbjct: 22  VWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT 81

Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
           E M   +L   L   E Q +  A  + +A  +AE + Y   +  +++ DL A  I+  +D
Sbjct: 82  ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ-NSIHRDLAARNILVGED 140

Query: 193 VNPRLSCFGLMKNSRDG--RSYSTNLAF--TPPEYLRTGRVTPESVMYSFGTLLLDLLSG 248
           +  +++ FGL +  ++    S    + +  T PE    G  + +S ++SFG LL ++ + 
Sbjct: 141 LVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTY 200

Query: 249 KHIP 252
             +P
Sbjct: 201 GQVP 204

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 65.8 bits (160), Expect = 1e-12
 Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 10/181 (5%)

Query: 74  YKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LVA 132
           Y+G      ++AVK     A   A+ FL EA  + QLR+  L  LLG   E    L +V 
Sbjct: 27  YRGN-----KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79

Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
           EYM   +L  +L       +     L+ +L + EA+EY  +    ++ DL A  ++  +D
Sbjct: 80  EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSED 138

Query: 193 VNPRLSCFGLMKNSRDGRSYST-NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI 251
              ++S FGL K +   +      + +T PE LR  + + +S ++SFG LL ++ S   +
Sbjct: 139 NVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 198

Query: 252 P 252
           P
Sbjct: 199 P 199

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 65.0 bits (158), Expect = 2e-12
 Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 8/181 (4%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+KG L+++  +AVK        + + +FL EAR + Q  +  +  L+G C +     +V
Sbjct: 11  VFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIV 70

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E +P       L   +   +K    ++ AL  A  + Y  SK   ++ DL A   +  +
Sbjct: 71  MELVPGGDFLSFL-RKKKDELKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGE 128

Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
           +   ++S FG+ +   DG   S+ L      +T PE L  GR + ES ++S+G LL +  
Sbjct: 129 NNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETF 188

Query: 247 S 247
           S
Sbjct: 189 S 189

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 64.4 bits (157), Expect = 4e-12
 Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 40/226 (17%)

Query: 56  FAMENI--VSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARA 106
             +  +  + E GE A   VYKG+L       +   +A+K    +A P  +Q F +EA  
Sbjct: 2   IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAEL 61

Query: 107 VGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF-------------HWETQPMK 153
           +  L++  +  LLG C +     ++ EY+ +  L + L                  +   
Sbjct: 62  MSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSL 121

Query: 154 WAMR-LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY 212
                L +A+ IA  +EY +S    ++ DL A   +  + +  ++S FGL   SRD   Y
Sbjct: 122 DCSDFLHIAIQIAAGMEYLSSHH-FVHRDLAARNCLVGEGLTVKISDFGL---SRDI--Y 175

Query: 213 STN-----------LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           S +           + + PPE +  G+ T ES ++SFG +L ++ S
Sbjct: 176 SADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFS 221

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 63.2 bits (154), Expect = 8e-12
 Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 12/198 (6%)

Query: 62  VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGC 121
           + E G     VV+ GK   +  +A+K     A  +   F+EEA+ + +L +  L  L G 
Sbjct: 9   LKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSE-DDFIEEAKVMMKLSHPNLVQLYGV 67

Query: 122 CCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALY 179
           C +     +V EYM N  L  +L     +  K      L +   + EA+EY  S    ++
Sbjct: 68  CTKQRPIFIVTEYMANGCLLNYL---RERKGKLGTEWLLDMCSDVCEAMEYLESNG-FIH 123

Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESV 234
            DL A   +  +D   ++S FGL +   D +  S+      + + PPE     R + +S 
Sbjct: 124 RDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSD 183

Query: 235 MYSFGTLLLDLLSGKHIP 252
           ++SFG L+ ++ S   +P
Sbjct: 184 VWSFGVLMWEVFSEGKMP 201

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 63.4 bits (154), Expect = 8e-12
 Identities = 49/190 (25%), Positives = 92/190 (48%), Gaps = 16/190 (8%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VV  GK   Q+ +A+K     +  +  +F+EEA+ + +L + +L  L G C +     +V
Sbjct: 19  VVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIV 77

Query: 132 AEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
            EYM N    + L +H   ++   +     L +   + E + Y  SK+  ++ DL A   
Sbjct: 78  TEYMSNGCLLNYLREHGKRFQPSQL-----LEMCKDVCEGMAYLESKQ-FIHRDLAARNC 131

Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYST-----NLAFTPPEYLRTGRVTPESVMYSFGTLL 242
           + DD    ++S FGL +   D    S+      + ++PPE L   + + +S +++FG L+
Sbjct: 132 LVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLM 191

Query: 243 LDLLSGKHIP 252
            ++ S   +P
Sbjct: 192 WEVYSLGKMP 201

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 62.9 bits (154), Expect = 9e-12
 Identities = 45/194 (23%), Positives = 73/194 (37%), Gaps = 24/194 (12%)

Query: 72  VVYKGK-LENQFRIAVKRFNRS-AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
            VY  +  +    +A+K   +     D  + L E + + +L++  +  L     + D+  
Sbjct: 14  KVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLY 73

Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN-AYR-- 186
           LV EY     L   L          A        I  ALEY         H     +R  
Sbjct: 74  LVMEYCEGGDLFDLLKKRGRLSEDEA--RFYLRQILSALEYL--------HSKGIVHRDL 123

Query: 187 ----IVFDDDVNPRLSCFGLMKNSRDGRSYSTN---LAFTPPEYLRTGRVTPESVMYSFG 239
               I+ D+D + +L+ FGL +    G   +T      +  PE L          ++S G
Sbjct: 124 KPENILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLG 183

Query: 240 TLLLDLLSGKHIPP 253
            +L +LL+GK  PP
Sbjct: 184 VILYELLTGK--PP 195

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 63.3 bits (154), Expect = 2e-11
 Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 26/210 (12%)

Query: 48  TLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARA 106
           T+    S    EN++S   + A    YKGK ++N  +  VK  N      + +  +    
Sbjct: 684 TINDILSSLKEENVISRGKKGAS---YKGKSIKNGMQFVVKEINDVNSIPSSEIAD---- 736

Query: 107 VGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE 166
           +G+L++  +  L+G C       L+ EY+    L++ L     + + W  R ++A+ IA+
Sbjct: 737 MGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVL-----RNLSWERRRKIAIGIAK 791

Query: 167 ALEY--CTSKERALYHDLNAYRIVFDDDVNPRLSCFGL-----MKNSRDGRSYSTNLAFT 219
           AL +  C      +  +L+  +I+ D    P L    L             S     A+ 
Sbjct: 792 ALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL-RLSLPGLLCTDTKCFISS-----AYV 845

Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLLSGK 249
            PE   T  +T +S +Y FG +L++LL+GK
Sbjct: 846 APETRETKDITEKSDIYGFGLILIELLTGK 875

Length = 968

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 61.6 bits (150), Expect = 3e-11
 Identities = 50/187 (26%), Positives = 93/187 (49%), Gaps = 11/187 (5%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V+ G      ++AVK   +        FL+EA+ + +LR+ +L  L   C E +   +V 
Sbjct: 22  VWMGTWNGTTKVAVKTL-KPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80

Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
           EYM   +L   L   E + ++    + +A  IAE + Y  S+   ++ DL A  I+  ++
Sbjct: 81  EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR-NYIHRDLAARNILVGEN 139

Query: 193 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +  +++ FGL +        +R+G  +   + +T PE    GR T +S ++SFG LL ++
Sbjct: 140 LVCKIADFGLARLIEDDEYTAREGAKFP--IKWTAPEAANYGRFTIKSDVWSFGILLTEI 197

Query: 246 LSGKHIP 252
           ++   +P
Sbjct: 198 VTYGRVP 204

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 60.6 bits (147), Expect = 6e-11
 Identities = 48/186 (25%), Positives = 90/186 (48%), Gaps = 8/186 (4%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VV+ GK   Q ++A+K  N  A  +   F+EEA+ + +L + +L  L G C +     +V
Sbjct: 19  VVHLGKWRAQIKVAIKAINEGAMSE-EDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIV 77

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M N  L  +L   + +  K  M L +   + E +EY   +   ++ DL A   +   
Sbjct: 78  TEFMENGCLLNYLRQRQGKLSK-DMLLSMCQDVCEGMEY-LERNSFIHRDLAARNCLVSS 135

Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
               ++S FG+ +   D    S++ A     ++PPE     + + +S ++SFG L+ ++ 
Sbjct: 136 TGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVF 195

Query: 247 SGKHIP 252
           +   +P
Sbjct: 196 TEGKMP 201

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 61.0 bits (148), Expect = 6e-11
 Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 14/188 (7%)

Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++A+K   + S  P+A  FL EA  + QL++ RL  L     + +   ++
Sbjct: 22  VWMGYYNGHTKVAIKSLKQGSMSPEA--FLAEANLMKQLQHPRLVRLYAVVTQ-EPIYII 78

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM N +L   L   E   +     + +A  IAE + +   K   ++ DL A  I+  +
Sbjct: 79  TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN-YIHRDLRAANILVSE 137

Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
            +  +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL +
Sbjct: 138 TLCCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTE 195

Query: 245 LLSGKHIP 252
           +++   IP
Sbjct: 196 IVTYGRIP 203

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 59.7 bits (144), Expect = 1e-10
 Identities = 45/187 (24%), Positives = 88/187 (47%), Gaps = 11/187 (5%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V+ G   N  ++AVK   +      + FLEEA  +  L++ +L  L     + +   ++ 
Sbjct: 22  VWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80

Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
           EYM   +L   L   E   +     +  +  IAE + Y   ++  ++ DL A  ++  + 
Sbjct: 81  EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAY-IERKNYIHRDLRAANVLVSES 139

Query: 193 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +  +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL ++
Sbjct: 140 LMCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGSFTIKSDVWSFGILLYEI 197

Query: 246 LSGKHIP 252
           ++   IP
Sbjct: 198 VTYGKIP 204

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 59.6 bits (144), Expect = 2e-10
 Identities = 53/194 (27%), Positives = 93/194 (47%), Gaps = 10/194 (5%)

Query: 73  VYKGKLE-NQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
           V+ G+L  +   +AVK    +  PD + +FL+EAR + Q  +  +  L+G C +     +
Sbjct: 11  VFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 70

Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
           V E +        L   E   +K    +++  + A  +EY  SK   ++ DL A   +  
Sbjct: 71  VMELVQGGDFLTFL-RTEGPRLKVKELIQMVENAAAGMEYLESKH-CIHRDLAARNCLVT 128

Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           +    ++S FG+ +   DG   ST       + +T PE L  GR + ES ++SFG LL +
Sbjct: 129 EKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWE 188

Query: 245 LLSGKHIPPSHVSS 258
             S   +P +++S+
Sbjct: 189 AFSLGAVPYANLSN 202

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 58.8 bits (142), Expect = 3e-10
 Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 12/198 (6%)

Query: 62  VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGC 121
           V E G     +V+ G    + ++A+K     A  +   F+EEA+ + +L + +L  L G 
Sbjct: 9   VQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSE-EDFIEEAQVMMKLSHPKLVQLYGV 67

Query: 122 CCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALY 179
           C E     LV E+M +  L+ +L     Q  K++    L + L + E + Y  S    ++
Sbjct: 68  CTERSPICLVFEFMEHGCLSDYL---RAQRGKFSQETLLGMCLDVCEGMAYLESSN-VIH 123

Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESV 234
            DL A   +  ++   ++S FG+ +   D +  S+      + ++ PE     + + +S 
Sbjct: 124 RDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSD 183

Query: 235 MYSFGTLLLDLLSGKHIP 252
           ++SFG L+ ++ S    P
Sbjct: 184 VWSFGVLMWEVFSEGKTP 201

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 58.8 bits (142), Expect = 3e-10
 Identities = 57/209 (27%), Positives = 94/209 (44%), Gaps = 22/209 (10%)

Query: 60  NIVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRN 112
            ++ E G+ +  +VY+G      K E + R+AVK  N SA    R +FL EA  +     
Sbjct: 9   TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 68

Query: 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW----ETQPMKWAMRLR----VALHI 164
             +  LLG   +G   L+V E M +  L  +L       E  P +    L+    +A  I
Sbjct: 69  HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 128

Query: 165 AEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAF 218
           A+ + Y  +K + ++ DL A   +   D   ++  FG+ ++       R G      + +
Sbjct: 129 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 187

Query: 219 TPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
             PE L+ G  T  S M+SFG +L ++ S
Sbjct: 188 MAPESLKDGVFTTSSDMWSFGVVLWEITS 216

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 57.4 bits (138), Expect = 1e-09
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 14/188 (7%)

Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 22  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 78

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 79  TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 137

Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 138 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 195

Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 196 LTTKGRVP 203

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 57.0 bits (137), Expect = 1e-09
 Identities = 49/188 (26%), Positives = 93/188 (49%), Gaps = 14/188 (7%)

Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++A+K     +  P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 22  VWMGTWNGTTKVAIKTLKPGTMMPEA--FLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIV 78

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M   +L   L   + + +K    + +A  IA+ + Y   +   ++ DL A  I+  D
Sbjct: 79  TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAY-IERMNYIHRDLRAANILVGD 137

Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 138 NLVCKIADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 195

Query: 245 LLSGKHIP 252
           L++   +P
Sbjct: 196 LVTKGRVP 203

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 56.9 bits (137), Expect = 1e-09
 Identities = 50/188 (26%), Positives = 90/188 (47%), Gaps = 14/188 (7%)

Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK        P++  FLEEA+ + +LR+ +L  L     E +   +V
Sbjct: 22  VWMGTWNGNTKVAVKTLKPGTMSPES--FLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIV 78

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L   E + +K    + +A  +A  + Y   +   ++ DL +  I+  D
Sbjct: 79  TEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAY-IERMNYIHRDLRSANILVGD 137

Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
            +  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 138 GLVCKIADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 195

Query: 245 LLSGKHIP 252
           L++   +P
Sbjct: 196 LVTKGRVP 203

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 57.1 bits (136), Expect = 2e-09
 Identities = 50/220 (22%), Positives = 82/220 (37%), Gaps = 22/220 (10%)

Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLR-NRRL 115
            I+ + GE +   VY  +  ++  +A+K   +          +FL E + +  L     +
Sbjct: 3   RILRKLGEGSFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNI 60

Query: 116 ANLLGCCCEGDERLLVAEYMPNDTLAKHL-FHWETQPMKWAMRLRVALHIAEALEYCTSK 174
             L     +     LV EY+   +L   L       P+  +  L +   I  ALEY  SK
Sbjct: 61  VKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK 120

Query: 175 ERALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSRDGRSYSTN----------LAFTPPEY 223
              ++ D+    I+ D D    +L  FGL K   D  S S+             +  PE 
Sbjct: 121 -GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEV 179

Query: 224 LR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSSFL 260
           L        +  S ++S G  L +LL+G        +S  
Sbjct: 180 LLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSA 219

Length = 384

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 56.6 bits (137), Expect = 2e-09
 Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 23/193 (11%)

Query: 73  VYKGKLENQF-----RIAVKRFNRSAWPDARQFLEEARAVGQLRN---RRLANLLGCCCE 124
           V   + +        ++AVK  N S     R   E  R +  LR      +    G C +
Sbjct: 20  VELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFE--REIEILRTLDHENIVKYKGVCEK 77

Query: 125 GDER--LLVAEYMPNDTLAKHL-FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHD 181
              R   L+ EY+P+ +L  +L  H +   +K    L  +  I + ++Y  S+ R ++ D
Sbjct: 78  PGGRSLRLIMEYLPSGSLRDYLQRHRDQINLK--RLLLFSSQICKGMDYLGSQ-RYIHRD 134

Query: 182 LNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTNLAFTP-----PEYLRTGRVTPESV 234
           L A  I+ + +   ++S FGL K         Y      +P     PE LRT + +  S 
Sbjct: 135 LAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASD 194

Query: 235 MYSFGTLLLDLLS 247
           ++SFG  L +L +
Sbjct: 195 VWSFGVTLYELFT 207

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 55.8 bits (135), Expect = 3e-09
 Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 20/196 (10%)

Query: 64  EHGEKAPNVVYKGKLENQFR----IAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANL 118
           E GE     V +G+L+   +    +A+K     +    R  FL EA  +GQ  +  +  L
Sbjct: 16  EFGE-----VCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRL 70

Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERAL 178
            G   +    +++ EYM N +L K L   + +       + +   IA  ++Y +  E   
Sbjct: 71  EGVVTKSRPVMIITEYMENGSLDKFLRENDGK-FTVGQLVGMLRGIASGMKYLS--EMNY 127

Query: 179 YH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-YSTN-----LAFTPPEYLRTGRVTP 231
            H DL A  I+ + ++  ++S FGL +   D  + Y+T      + +T PE +   + T 
Sbjct: 128 VHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTS 187

Query: 232 ESVMYSFGTLLLDLLS 247
            S ++SFG ++ +++S
Sbjct: 188 ASDVWSFGIVMWEVMS 203

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 55.5 bits (134), Expect = 4e-09
 Identities = 44/187 (23%), Positives = 91/187 (48%), Gaps = 11/187 (5%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V++G   N   +AVK   +    D + FL EA+ + +LR+ +L  L   C   +   +V 
Sbjct: 22  VWEGLWNNTTPVAVKTL-KPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80

Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
           E M   +L ++L     + +K    + +A  +A  + Y  + +  ++ DL A  ++  ++
Sbjct: 81  ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEA-QNYIHRDLAARNVLVGEN 139

Query: 193 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
              +++ FGL +        +R+G  +   + +T PE     R + +S ++SFG LL ++
Sbjct: 140 NICKVADFGLARVIKEDIYEAREGAKFP--IKWTAPEAALYNRFSIKSDVWSFGILLTEI 197

Query: 246 LSGKHIP 252
           ++   +P
Sbjct: 198 VTYGRMP 204

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 55.0 bits (132), Expect = 7e-09
 Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 22/203 (10%)

Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 13  ELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 72

Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHL--FHWETQ------PMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L     E +      P      +++A  IA+ +
Sbjct: 73  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGM 132

Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A   +  +D   ++  FG+ ++       R G      + +  PE
Sbjct: 133 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 191

Query: 223 YLRTGRVTPESVMYSFGTLLLDL 245
            L+ G  T  S ++SFG +L ++
Sbjct: 192 SLKDGVFTTYSDVWSFGVVLWEI 214

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 54.1 bits (130), Expect = 1e-08
 Identities = 45/209 (21%), Positives = 86/209 (41%), Gaps = 23/209 (11%)

Query: 66  GEKAPNVVYKGKLE----NQFRIAVK--RFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
           GE     V +G+L     +Q ++AVK  + +   + +  +FL EA  +    +  +  L+
Sbjct: 8   GEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLI 67

Query: 120 GCCCEGDER------LLVAEYMPNDTLAKHLFH--WETQPMKWA--MRLRVALHIAEALE 169
           G C E          +++  +M +  L   L +      P K      L+  + IA  +E
Sbjct: 68  GVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGME 127

Query: 170 YCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPP------EY 223
           Y +++   ++ DL A   +  +D+   ++ FGL K    G  Y        P      E 
Sbjct: 128 YLSNR-NFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIES 186

Query: 224 LRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
           L     T +S +++FG  + ++ +    P
Sbjct: 187 LADRVYTSKSDVWAFGVTMWEIATRGQTP 215

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 52.2 bits (125), Expect = 6e-08
 Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 14/174 (8%)

Query: 84  IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTL 140
           +AVK   R         + +E   +  L +  +    GCC E   +   L+ EY+P  +L
Sbjct: 36  VAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSL 95

Query: 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200
             +L       +  A  L  A  I E + Y  S+   ++ DL A  ++ D+D   ++  F
Sbjct: 96  RDYL---PKHKLNLAQLLLFAQQICEGMAYLHSQ-HYIHRDLAARNVLLDNDRLVKIGDF 151

Query: 201 GLMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           GL K   +G  Y        + + +   E L+  + +  S ++SFG  L +LL+
Sbjct: 152 GLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLT 205

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 51.8 bits (124), Expect = 8e-08
 Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 11/157 (7%)

Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR 157
           R FL EA  +GQ  +  +  L G    G+  ++V EYM N  L   L   E Q +  A +
Sbjct: 51  RGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLV--AGQ 108

Query: 158 LRVALH-IAEALEYCTSKERALYHD-LNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN 215
           L   L  +A  ++Y +  E    H  L A++++ + D+  ++S F  ++  +    Y+T 
Sbjct: 109 LMGMLPGLASGMKYLS--EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTM 166

Query: 216 -----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
                + +  PE ++    +  S ++SFG ++ +++S
Sbjct: 167 SGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMS 203

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 50.8 bits (121), Expect = 2e-07
 Identities = 45/191 (23%), Positives = 84/191 (43%), Gaps = 28/191 (14%)

Query: 79  ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
           +++  +AVK    ++    + F  EA  +  L++  +    G C EGD  ++V EYM + 
Sbjct: 33  QDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHG 92

Query: 139 TLAKHL--------FHWETQP---MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
            L K L           E      +  +  L +A  IA  + Y  S +  ++ DL     
Sbjct: 93  DLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS-QHFVHRDLATRNC 151

Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYSTN-----------LAFTPPEYLRTGRVTPESVMY 236
           +  +++  ++  FG+   SRD   YST+           + + PPE +   + T ES ++
Sbjct: 152 LVGENLLVKIGDFGM---SRD--VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVW 206

Query: 237 SFGTLLLDLLS 247
           S G +L ++ +
Sbjct: 207 SLGVVLWEIFT 217

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 50.2 bits (120), Expect = 3e-07
 Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 9/168 (5%)

Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKH 143
           +AVK           +FL+EA  + ++++  L  LLG C       ++ E+M    L  +
Sbjct: 34  VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 92

Query: 144 LFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203
           L     Q +   + L +A  I+ A+EY   K   ++ DL A   +  ++   +++ FGL 
Sbjct: 93  LRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 151

Query: 204 KNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 152 RLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 198

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 50.0 bits (119), Expect = 4e-07
 Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 18/181 (9%)

Query: 84  IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142
           +AVK         AR  FL+E + + +L+N  +  LLG C   D   ++ EYM N  L +
Sbjct: 47  VAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQ 106

Query: 143 HLFHWETQP----------MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
            L   E +           +  A  L +A+ IA  ++Y  S    ++ DL     +  + 
Sbjct: 107 FLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN-FVHRDLATRNCLVGNH 165

Query: 193 VNPRLSCFGLMKNSRDGRSYSTNLAFTPP------EYLRTGRVTPESVMYSFGTLLLDLL 246
              +++ FG+ +N   G  Y        P      E +  G+ T  S +++FG  L ++ 
Sbjct: 166 YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMF 225

Query: 247 S 247
           +
Sbjct: 226 T 226

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 49.4 bits (118), Expect = 5e-07
 Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 16/202 (7%)

Query: 72  VVYKGKL--ENQFRI--AVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
            VY G L   +  +I  AVK  NR +   +  QFL+E   +    +  + +LLG C   +
Sbjct: 10  CVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE 69

Query: 127 -ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
              L+V  YM +  L ++    ET        +   L +A+ +EY  SK + ++ DL A 
Sbjct: 70  GSPLVVLPYMKHGDL-RNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK-KFVHRDLAAR 127

Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYS 237
             + D+    +++ FGL ++  D   YS +        + +   E L+T + T +S ++S
Sbjct: 128 NCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWS 187

Query: 238 FGTLLLDLLSGKHIPPSHVSSF 259
           FG LL +L++    P   V SF
Sbjct: 188 FGVLLWELMTRGAPPYPDVDSF 209

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 49.2 bits (117), Expect = 6e-07
 Identities = 46/194 (23%), Positives = 84/194 (43%), Gaps = 31/194 (15%)

Query: 79  ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
           +++  +AVK          + F  EA  +  L++  +    G C +GD  ++V EYM + 
Sbjct: 33  KDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHG 92

Query: 139 TLAKHL--------FHWETQPMK------WAMRLRVALHIAEALEYCTSKERALYHDLNA 184
            L K L           + QP +       +  L +A  IA  + Y  S +  ++ DL  
Sbjct: 93  DLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS-QHFVHRDLAT 151

Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----------LAFTPPEYLRTGRVTPES 233
              +   ++  ++  FG+   SRD   YST+           + + PPE +   + T ES
Sbjct: 152 RNCLVGANLLVKIGDFGM---SRD--VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTES 206

Query: 234 VMYSFGTLLLDLLS 247
            ++SFG +L ++ +
Sbjct: 207 DVWSFGVILWEIFT 220

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 48.8 bits (116), Expect = 7e-07
 Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 23/198 (11%)

Query: 64  EHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANL 118
           E GE     V++G L+     +  +A+K          RQ FL EA  +GQ  +  +  L
Sbjct: 17  EFGE-----VFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRL 71

Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHL--FHWETQPMKWAMRLRVALHIAEALEYCTSKER 176
            G   +    +++ EYM N  L K+L     E    +    LR    IA  ++Y  S   
Sbjct: 72  EGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLR---GIAAGMKY-LSDMN 127

Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYSTN-----LAFTPPEYLRTGRV 229
            ++ DL A  I+ + ++  ++S FGL +   D    +Y+T+     + +T PE +   + 
Sbjct: 128 YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKF 187

Query: 230 TPESVMYSFGTLLLDLLS 247
           T  S ++SFG ++ +++S
Sbjct: 188 TSASDVWSFGIVMWEVMS 205

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 12/183 (6%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY  K   +  +AVK   +       ++FL EA  + QL +  +  L+G  C+G+  +LV
Sbjct: 15  VYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIG-VCKGEPLMLV 73

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E  P   L K+L   + + +  +    +A  +A  + Y  SK   ++ DL A  ++  +
Sbjct: 74  MELAPLGPLLKYLK--KRREIPVSDLKELAHQVAMGMAYLESK-HFVHRDLAARNVLLVN 130

Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
               ++S FG+ +    G  Y          L +  PE +  G+ + +S ++S+G  L +
Sbjct: 131 RHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWE 190

Query: 245 LLS 247
             S
Sbjct: 191 AFS 193

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 48.0 bits (114), Expect = 2e-06
 Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 25/188 (13%)

Query: 84  IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142
           +AVK     A  +AR  FL+E + + +L++  +  LLG C + D   ++ EYM N  L +
Sbjct: 49  VAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQ 108

Query: 143 HLFHWETQ-----------------PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
            L                        + ++  L VAL IA  ++Y +S    ++ DL   
Sbjct: 109 FLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN-FVHRDLATR 167

Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPP------EYLRTGRVTPESVMYSFG 239
             +  +++  +++ FG+ +N   G  Y        P      E +  G+ T  S +++FG
Sbjct: 168 NCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFG 227

Query: 240 TLLLDLLS 247
             L ++L 
Sbjct: 228 VTLWEILM 235

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 47.1 bits (113), Expect = 2e-06
 Identities = 45/133 (33%), Positives = 58/133 (43%), Gaps = 10/133 (7%)

Query: 126 DERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
           +E+L LV EY P   L  HL        + A R   A  I  ALEY  S    +Y DL  
Sbjct: 65  EEKLYLVLEYAPGGELFSHLSKEGRFSEERA-RFYAA-EIVLALEYLHSL-GIIYRDLKP 121

Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
             I+ D D + +L+ FGL K      S +     TP    PE L           +S G 
Sbjct: 122 ENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGV 181

Query: 241 LLLDLLSGKHIPP 253
           LL ++L+GK  PP
Sbjct: 182 LLYEMLTGK--PP 192

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 46.9 bits (111), Expect = 3e-06
 Identities = 57/215 (26%), Positives = 90/215 (41%), Gaps = 38/215 (17%)

Query: 64  EHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLA 116
           E GE A   V+  +  N      +  +AVK   + A   ARQ F  EA  +  L+++ + 
Sbjct: 12  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKAL-KEASESARQDFQREAELLTVLQHQHIV 70

Query: 117 NLLGCCCEGDERLLVAEYMPNDTL----------AKHLFHWETQP---MKWAMRLRVALH 163
              G C EG   L+V EYM +  L          AK L   E      +     L +A  
Sbjct: 71  RFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQ 130

Query: 164 IAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-------- 215
           IA  + Y  S    ++ DL     +    +  ++  FG+   SRD   YST+        
Sbjct: 131 IASGMVYLASLH-FVHRDLATRNCLVGQGLVVKIGDFGM---SRD--IYSTDYYRVGGRT 184

Query: 216 ---LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
              + + PPE +   + T ES ++SFG +L ++ +
Sbjct: 185 MLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFT 219

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 45.0 bits (106), Expect = 1e-05
 Identities = 38/166 (22%), Positives = 77/166 (46%), Gaps = 11/166 (6%)

Query: 100 FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLR 159
           FL EA  +  L++ +L  L     + +   ++ E+M   +L   L   E         + 
Sbjct: 48  FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 106

Query: 160 VALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK-------NSRDGRSY 212
            +  IAE + +   +   ++ DL A  I+    +  +++ FGL +        +R+G  +
Sbjct: 107 FSAQIAEGMAF-IEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 165

Query: 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS 258
              + +T PE +  G  T +S ++SFG LL+++++   IP   +S+
Sbjct: 166 P--IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN 209

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 44.5 bits (105), Expect = 2e-05
 Identities = 50/201 (24%), Positives = 97/201 (48%), Gaps = 27/201 (13%)

Query: 64  EHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLAN 117
           E GE     V +G+L+     +  +A+K   +S + +   R FL EA  +GQ  +  + +
Sbjct: 16  EFGE-----VCRGRLKLPGKREIFVAIKTL-KSGYTEKQRRDFLSEASIMGQFDHPNIIH 69

Query: 118 LLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWAMRLRVALHIAEALEYCTSKE 175
           L G   +    +++ E+M N  L   L   + Q   ++    LR    IA  ++Y  S+ 
Sbjct: 70  LEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLR---GIAAGMKY-LSEM 125

Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS---YSTNLA------FTPPEYLRT 226
             ++ DL A  I+ + ++  ++S FGL +   D  S   Y+++L       +T PE +  
Sbjct: 126 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAY 185

Query: 227 GRVTPESVMYSFGTLLLDLLS 247
            + T  S ++S+G ++ +++S
Sbjct: 186 RKFTSASDVWSYGIVMWEVMS 206

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 44.7 bits (105), Expect = 2e-05
 Identities = 38/174 (21%), Positives = 77/174 (44%), Gaps = 10/174 (5%)

Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKH 143
           +A+K+ N    P     + E   + +L+N  + N L     GDE  +V EY+   +L   
Sbjct: 47  VAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDV 106

Query: 144 LFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203
           +        + A   R  L   +ALE+  + +  ++ D+ +  ++   D + +L+ FG  
Sbjct: 107 VTETCMDEAQIAAVCRECL---QALEFLHANQ-VIHRDIKSDNVLLGMDGSVKLTDFGFC 162

Query: 204 KNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP 253
                 +S  + +  TP    PE +      P+  ++S G + ++++ G+  PP
Sbjct: 163 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE--PP 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 44.5 bits (105), Expect = 2e-05
 Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 15/170 (8%)

Query: 100 FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL-FHWETQPMKWAMRL 158
           F E A  + QL ++ L    G C  GDE ++V EY+   +L  +L  +     + W  +L
Sbjct: 46  FFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISW--KL 103

Query: 159 RVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST--- 214
            VA  +A AL +   +++ L H ++ A  ++   + + +      +K S  G S +    
Sbjct: 104 EVAKQLAWALHFL--EDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK 161

Query: 215 -----NLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHVSS 258
                 + + PPE +   + ++  +  +SFGT L ++ SG   P S + S
Sbjct: 162 EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS 211

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 43.8 bits (103), Expect = 3e-05
 Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 34/216 (15%)

Query: 62  VSEHGEKAPNVVYKGKL-----ENQFRIAVKRF----NRSAWPDARQFLEEARAVGQLRN 112
           + E GE A   +YKG L     ++   +A+K      N   W +   F +EA  + +L +
Sbjct: 10  MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGE---FQQEASLMAELHH 66

Query: 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW-----------ETQPMKWAMR---- 157
             +  LLG   +     ++ EY+    L + L              E   +K ++     
Sbjct: 67  PNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDF 126

Query: 158 LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-- 215
           L +A+ IA  +EY +S    ++ DL A  I+  + ++ ++S  GL +       Y     
Sbjct: 127 LHIAIQIAAGMEYLSS-HFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPK 185

Query: 216 ----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
               + + PPE +  G+ + +S ++SFG +L ++ S
Sbjct: 186 SLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFS 221

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 44.1 bits (104), Expect = 3e-05
 Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 18/191 (9%)

Query: 84  IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142
           +AVK     A  +AR  FL+E + + +L++  +  LL  C   D   ++ EYM N  L +
Sbjct: 49  VAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQ 108

Query: 143 HLFHWETQP---------MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 193
            L   E Q          + ++  + +A  IA  ++Y +S    ++ DL     +   + 
Sbjct: 109 FLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN-FVHRDLATRNCLVGKNY 167

Query: 194 NPRLSCFGLMKNSRDGRSYSTNLAFTPP------EYLRTGRVTPESVMYSFGTLLLDLLS 247
             +++ FG+ +N   G  Y        P      E +  G+ T  S +++FG  L ++L+
Sbjct: 168 TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILT 227

Query: 248 -GKHIPPSHVS 257
             K  P S +S
Sbjct: 228 LCKEQPYSQLS 238

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 30/113 (26%), Positives = 44/113 (38%), Gaps = 10/113 (8%)

Query: 158 LRVALHIAEALEYC----TSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS 213
            R+   +  AL  C          L+ DL    I  D + N +L  FGL K      S++
Sbjct: 108 WRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFA 167

Query: 214 TNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSSFLWL 262
                TP    PE L       +S ++S G L+ +L +    PP    + L L
Sbjct: 168 KTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALS--PPFTARNQLQL 218

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 43.7 bits (103), Expect = 4e-05
 Identities = 42/192 (21%), Positives = 83/192 (43%), Gaps = 8/192 (4%)

Query: 66  GEKAPNVVYKGKLENQFRI-AVKRFNRSAWPDARQ--FLEEARAVGQLRNRRLANLLGCC 122
           G+ +  VV+K   +   R+ A+K+ + S      +   ++EAR + +L +  +       
Sbjct: 9   GKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESF 68

Query: 123 CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL 182
            +  +  +V EY  N  L K L     +P+      R  + I   L +  SK + L+ D+
Sbjct: 69  LDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK-KILHRDI 127

Query: 183 NAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSF 238
            +  +  D   N ++   G+ K   D  +++  +  TP    PE         +S +++ 
Sbjct: 128 KSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWAL 187

Query: 239 GTLLLDLLSGKH 250
           G +L +  +GKH
Sbjct: 188 GVVLYECCTGKH 199

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 43.1 bits (102), Expect = 5e-05
 Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 9/155 (5%)

Query: 100 FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLR 159
           FL+EA  +  L +  L  L G        ++V E  P  +L   L          +    
Sbjct: 43  FLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCD 101

Query: 160 VALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN---- 215
            A+ IA  + Y  SK R ++ DL A  I+   D   ++  FGLM+       +       
Sbjct: 102 YAVQIANGMRYLESK-RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHL 160

Query: 216 ---LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
               A+  PE LRT   +  S ++ FG  L ++ +
Sbjct: 161 KVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFT 195

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 43.3 bits (102), Expect = 5e-05
 Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 33/208 (15%)

Query: 68  KAPNVVYKGKLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGD 126
           +AP ++     E    +AVK     A  D +  F  EA  + +  +  +  LLG C  G 
Sbjct: 25  RAPGLL---PYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81

Query: 127 ERLLVAEYMPNDTLAKHLFH----WETQ----------------PMKWAMRLRVALHIAE 166
              L+ EYM    L + L H     +                  P+    +L +A  +A 
Sbjct: 82  PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAA 141

Query: 167 ALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKN--SRDGRSYSTNLA----FT 219
            + Y +  ER   H DL     +  +++  +++ FGL +N  S D    S N A    + 
Sbjct: 142 GMAYLS--ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWM 199

Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           PPE +   R T ES ++++G +L ++ S
Sbjct: 200 PPESIFYNRYTTESDVWAYGVVLWEIFS 227

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 43.2 bits (102), Expect = 6e-05
 Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 41/200 (20%)

Query: 73  VYKG-----KLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
           VYKG       + +  +A+K       P A +  L+EA  +  + +  +  LLG C    
Sbjct: 23  VYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICL-SS 81

Query: 127 ERLLVAEYMP-----------NDTL-AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK 174
           +  L+ + MP            D + +++L +W  Q             IA+ + Y   +
Sbjct: 82  QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQ-------------IAKGMSYL--E 126

Query: 175 ERALYH-DLNAYRIVFDDDVNPRLSCFGLMKN-SRDGRSYSTNLAFTP-----PEYLRTG 227
           E+ L H DL A  ++     + +++ FGL K    D + Y       P      E +   
Sbjct: 127 EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHR 186

Query: 228 RVTPESVMYSFGTLLLDLLS 247
             T +S ++S+G  + +L++
Sbjct: 187 IYTHKSDVWSYGVTVWELMT 206

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 43.1 bits (101), Expect = 6e-05
 Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 17/195 (8%)

Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG         +  +A+K  N +  P A  +F++EA  +  + +  L  LL
Sbjct: 16  GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLL 75

Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
           G C     + LV + MP+  L  ++ H     +   + L   + IA+ + Y   +ER L 
Sbjct: 76  GVCLSPTIQ-LVTQLMPHGCLLDYV-HEHKDNIGSQLLLNWCVQIAKGMMYL--EERRLV 131

Query: 180 H-DLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYL-----RTGRVTPE 232
           H DL A  ++     + +++ FGL +    D + Y+ +    P +++        + T +
Sbjct: 132 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQ 191

Query: 233 SVMYSFGTLLLDLLS 247
           S ++S+G  + +L++
Sbjct: 192 SDVWSYGVTIWELMT 206

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 42.6 bits (100), Expect = 8e-05
 Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 17/161 (10%)

Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT----LAKHLFHWETQPMK 153
           R FL EA  +GQ  +  + +L G   +    ++V EYM N +    L KH   +    + 
Sbjct: 50  RDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLV 109

Query: 154 WAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RS 211
             +R      IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +
Sbjct: 110 GMLR-----GIASGMKY-LSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA 163

Query: 212 YSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           Y+T      + +T PE +   + T  S ++S+G ++ +++S
Sbjct: 164 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 204

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 43.1 bits (101), Expect = 8e-05
 Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 23/167 (13%)

Query: 101 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--- 157
           +E  + +G+ +N  + NLLG C +     ++ EY     L ++L       M ++     
Sbjct: 68  MEMMKMIGKHKN--IINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCK 125

Query: 158 -----------LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206
                      +  A  +A  +EY  S+ + ++ DL A  ++  +D   +++ FGL ++ 
Sbjct: 126 LPEEQLTFKDLVSCAYQVARGMEYLASQ-KCIHRDLAARNVLVTEDNVMKIADFGLARDV 184

Query: 207 RDGRSY--STN----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
            +   Y  +TN    + +  PE L     T +S ++SFG LL ++ +
Sbjct: 185 HNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 231

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 42.4 bits (99), Expect = 1e-04
 Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)

Query: 66  GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
           G+ A   VY    +     +A+++ N    P     + E   + + +N  + N L     
Sbjct: 29  GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88

Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
           GDE  +V EY+   +L   +        + A   R  L   +ALE+  S +  ++ D+ +
Sbjct: 89  GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRDIKS 144

Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
             I+   D + +L+ FG        +S  + +  TP    PE +      P+  ++S G 
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204

Query: 241 LLLDLLSGKHIPP 253
           + ++++ G+  PP
Sbjct: 205 MAIEMIEGE--PP 215

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 42.2 bits (99), Expect = 1e-04
 Identities = 46/208 (22%), Positives = 85/208 (40%), Gaps = 26/208 (12%)

Query: 73  VYKGKL-------ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCE 124
           VY+G             R+AVK   + A    + +FL+EA  +    +  +  LLG C  
Sbjct: 11  VYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL 70

Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAM-----RLRVALHIAEALEYCTSKERALY 179
            + + ++ E M    L  +L     +     +      L + L +A+   Y   +   ++
Sbjct: 71  NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVY-LEQMHFIH 129

Query: 180 HDLNAYRIV-----FDDDVNPRLSCFGLMKNSRDGRSYST------NLAFTPPEYLRTGR 228
            DL A   +     +D D   ++  FGL ++      Y         + +  PE L  G+
Sbjct: 130 RDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGK 189

Query: 229 VTPESVMYSFGTLLLDLLSGKHIP-PSH 255
            T +S ++SFG L+ ++L+    P P+ 
Sbjct: 190 FTTQSDVWSFGVLMWEILTLGQQPYPAL 217

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 42.4 bits (99), Expect = 1e-04
 Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)

Query: 66  GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
           G+ A   VY    +     +A+K+ N    P     + E   + + +N  + N L     
Sbjct: 28  GQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 87

Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
           GDE  +V EY+   +L   +        + A   R  L   +AL++  S +  ++ D+ +
Sbjct: 88  GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALDFLHSNQ-VIHRDIKS 143

Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
             I+   D + +L+ FG        +S  + +  TP    PE +      P+  ++S G 
Sbjct: 144 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 203

Query: 241 LLLDLLSGKHIPP 253
           + ++++ G+  PP
Sbjct: 204 MAIEMVEGE--PP 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 42.3 bits (99), Expect = 1e-04
 Identities = 45/212 (21%), Positives = 85/212 (40%), Gaps = 37/212 (17%)

Query: 84  IAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL-- 140
           +AVK    +A   + R  L E   + Q+ +  +  L G C +    LL+ EY    +L  
Sbjct: 33  VAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRS 92

Query: 141 --------------------AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
                               + +L + + + +     +  A  I+  ++Y    E  L H
Sbjct: 93  FLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA--EMKLVH 150

Query: 181 -DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPES 233
            DL A  ++  +    ++S FGL ++  +  SY         + +   E L     T +S
Sbjct: 151 RDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQS 210

Query: 234 VMYSFGTLLLDLLS-GKH----IPPSHVSSFL 260
            ++SFG LL ++++ G +    I P  + + L
Sbjct: 211 DVWSFGVLLWEIVTLGGNPYPGIAPERLFNLL 242

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 41.9 bits (98), Expect = 1e-04
 Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 28/211 (13%)

Query: 66  GEKAPNVVYKGKL---ENQFRIAVKRF-----NRSAWPDARQFLEEARAVGQLRNRRLAN 117
           GE     V +G+L   ++  ++AVK        RS   D   FL EA  + +  +  +  
Sbjct: 8   GEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMED---FLSEAVCMKEFDHPNVMR 64

Query: 118 LLGCCCEGDER------LLVAEYMPNDTLAKHLFHWE--TQP--MKWAMRLRVALHIAEA 167
           L+G C +  E       +++  +M +  L   L +      P  +   M ++    IA  
Sbjct: 65  LIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASG 124

Query: 168 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPP 221
           +EY +SK   ++ DL A   + ++++N  ++ FGL K        R GR     + +   
Sbjct: 125 MEYLSSK-SFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAI 183

Query: 222 EYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
           E L     T +S ++SFG  + ++ +    P
Sbjct: 184 ESLADRVYTTKSDVWSFGVTMWEIATRGQTP 214

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 20/176 (11%)

Query: 96  DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWA 155
           D+  F E A  + QL ++ L  L G C   DE ++V EY+    L   L H E   +   
Sbjct: 44  DSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFL-HREKNNVSLH 101

Query: 156 MRLRVALHIAEALEYCTSKE--------RALY---HDLNAYRIVFDDDVNPRLSCFGLMK 204
            +L VA  +A AL Y   K+        + +    + LN   + F    +P +    L +
Sbjct: 102 WKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSR 161

Query: 205 NSRDGRSYSTNLAFTPPEYLRTGRVTPESVM--YSFGTLLLDLLSGKHIPPSHVSS 258
             R  R       +  PE +R G+ +       +SFGT LL++ S    P S +SS
Sbjct: 162 EERVERI-----PWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS 212

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 41.2 bits (96), Expect = 3e-04
 Identities = 36/167 (21%), Positives = 78/167 (46%), Gaps = 23/167 (13%)

Query: 101 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL---------FHWET-- 149
           +E  + +G+ +N  + NLLG C +     ++ EY     L ++L         + ++   
Sbjct: 71  MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIAR 128

Query: 150 ---QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK-- 204
              + M +   +     +A  +EY  S ++ ++ DL A  ++  ++   +++ FGL +  
Sbjct: 129 VPDEQMTFKDLVSCTYQVARGMEYLAS-QKCIHRDLAARNVLVTENNVMKIADFGLARDV 187

Query: 205 NSRDGRSYSTN----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           N+ D    +TN    + +  PE L     T +S ++SFG L+ ++ +
Sbjct: 188 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 234

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 40.8 bits (95), Expect = 4e-04
 Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 14/177 (7%)

Query: 77  KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LVAEYM 135
           KLE + RI  KR   S   + +Q LE+        N R    L    E  + L LV   M
Sbjct: 32  KLEKK-RIK-KRKGESMALNEKQILEKV-------NSRFVVSLAYAYETKDALCLVLTLM 82

Query: 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 195
               L  H++H      +    +  A  I   LE    +ER +Y DL    I+ DD  + 
Sbjct: 83  NGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLED-LHQERIVYRDLKPENILLDDHGHI 141

Query: 196 RLSCFGLMKNSRDGRSYS---TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK 249
           R+S  GL  +  +G++       + +  PE ++  R T     ++ G LL ++++G+
Sbjct: 142 RISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 40.6 bits (96), Expect = 4e-04
 Identities = 41/133 (30%), Positives = 60/133 (45%), Gaps = 19/133 (14%)

Query: 130 LVAEYMPND---TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
           +V EYM +D    L      +    +K  M+      + E L+Y  S    L+ D+    
Sbjct: 77  MVFEYMDHDLTGLLDSPEVKFTESQIKCYMK-----QLLEGLQYLHSN-GILHRDIKGSN 130

Query: 187 IVFDDDVNPRLSCFGLMK--NSRDGRSYSTNLAFT----PPEYLRTG--RVTPESVMYSF 238
           I+ ++D   +L+ FGL +    R+   Y TN   T    PPE L  G  R  PE  M+S 
Sbjct: 131 ILINNDGVLKLADFGLARPYTKRNSADY-TNRVITLWYRPPELL-LGATRYGPEVDMWSV 188

Query: 239 GTLLLDLLSGKHI 251
           G +L +L  GK I
Sbjct: 189 GCILAELFLGKPI 201

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 34/215 (15%)

Query: 56  FAMENIV--SEHGEKAPNVVYKGKLEN------QFRIAVKRFN-RSAWPDARQFLEEARA 106
              E I    E G+ +  +VY+G  +       + R+A+K  N  ++  +  +FL EA  
Sbjct: 3   LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASV 62

Query: 107 VGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL--------FHWETQPMKWAMRL 158
           + +     +  LLG    G   L+V E M    L  +L         +    P      +
Sbjct: 63  MKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFI 122

Query: 159 RVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--- 215
           ++A  IA+ + Y  +K + ++ DL A   +  +D+  ++  FG+   +RD   Y T+   
Sbjct: 123 QMAAEIADGMAYLAAK-KFVHRDLAARNCMVAEDLTVKIGDFGM---TRD--IYETDYYR 176

Query: 216 --------LAFTPPEYLRTGRVTPESVMYSFGTLL 242
                   + +  PE L+ G  T +S ++SFG +L
Sbjct: 177 KGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVL 211

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 40.4 bits (94), Expect = 5e-04
 Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 23/167 (13%)

Query: 101 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL--------------FH 146
           +E  + +G+ +N  + NLLG C +     ++ EY     L ++L                
Sbjct: 74  MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQ 131

Query: 147 WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206
              + + +   +  A  +A  +EY  SK + ++ DL A  ++  +D   +++ FGL ++ 
Sbjct: 132 VPEEQLSFKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDI 190

Query: 207 R--DGRSYSTN----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
              D    +TN    + +  PE L     T +S ++SFG LL ++ +
Sbjct: 191 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 237

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 40.3 bits (94), Expect = 6e-04
 Identities = 43/193 (22%), Positives = 82/193 (42%), Gaps = 11/193 (5%)

Query: 66  GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
           G+ A   VY    +     +A+K+ N    P     + E   + + ++  + N L     
Sbjct: 28  GQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLV 87

Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
           GDE  +V EY+   +L   +   ET  M       V     +ALE+  S +  ++ D+ +
Sbjct: 88  GDELWVVMEYLAGGSLTDVVT--ETC-MDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKS 143

Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
             I+   D + +L+ FG        +S  + +  TP    PE +      P+  ++S G 
Sbjct: 144 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 203

Query: 241 LLLDLLSGKHIPP 253
           + ++++ G+  PP
Sbjct: 204 MAIEMVEGE--PP 214

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 39.5 bits (92), Expect = 8e-04
 Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 14/166 (8%)

Query: 110 LRNRRLANLL---GCCCEGDER--LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHI 164
           LRN    N++   G C E       L+ E++P+ +L ++L       +    +L+ A+ I
Sbjct: 60  LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPR-NKNKINLKQQLKYAVQI 118

Query: 165 AEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST-------NLA 217
            + ++Y  S++  ++ DL A  ++ + +   ++  FGL K     + Y T        + 
Sbjct: 119 CKGMDYLGSRQY-VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVF 177

Query: 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSSFLWLV 263
           +  PE L   +    S ++SFG  L +LL+      S ++ FL ++
Sbjct: 178 WYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMI 223

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 39.5 bits (92), Expect = 9e-04
 Identities = 45/195 (23%), Positives = 74/195 (37%), Gaps = 24/195 (12%)

Query: 83  RIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 141
           R+ VK    SA PD +  FL+E +   +L +  +   LG C E    LLV E+ P   L 
Sbjct: 24  RVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLK 83

Query: 142 KHL------FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 195
            +L           Q     +  R+A  +A  L +   +   ++ DL         D++ 
Sbjct: 84  NYLRSNRGMVAQMAQKD---VLQRMACEVASGLLW-LHQADFIHSDLALRNCQLTADLSV 139

Query: 196 RLSCFGLMKNSRDGRSYSTN------LAFTPPEY-------LRTGRVTPESVMYSFGTLL 242
           ++  +GL         Y T       L +  PE        L     T +S ++S G  +
Sbjct: 140 KIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTM 199

Query: 243 LDLLSGKHIPPSHVS 257
            +L +    P   +S
Sbjct: 200 WELFTAADQPYPDLS 214

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 39.1 bits (92), Expect = 0.001
 Identities = 40/189 (21%), Positives = 75/189 (39%), Gaps = 10/189 (5%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
            VYK +       +A+K     +     + + E + + + ++  +    G   + DE  +
Sbjct: 15  EVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWI 74

Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
           V E+    +L K L     Q +  +    V   + + LEY  S    ++ D+ A  I+  
Sbjct: 75  VMEFCSGGSL-KDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN-GIIHRDIKAANILLT 132

Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLL 246
            D   +L  FGL     D ++    +  TP    PE +       ++ ++S G   ++L 
Sbjct: 133 SDGEVKLIDFGLSAQLSDTKA-RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELA 191

Query: 247 SGKHIPPSH 255
            GK  PP  
Sbjct: 192 EGK--PPYS 198

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 44/200 (22%), Positives = 76/200 (38%), Gaps = 26/200 (13%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
           +VY  + L  Q RIA+K          +   EE      L++R +   LG   E     +
Sbjct: 23  IVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82

Query: 131 VAEYMPNDTLAKHL-FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN-AYRIV 188
             E +P  +L+  L   W          +     I E L+Y         HD    +R +
Sbjct: 83  FMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKY--------LHDNQIVHRDI 134

Query: 189 FDDDV--NP-----RLSCFGLMKN----SRDGRSYSTNLAFTPPEYLRTGR--VTPESVM 235
             D+V  N      ++S FG  K     +    +++  L +  PE +  G       + +
Sbjct: 135 KGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADI 194

Query: 236 YSFGTLLLDLLSGKHIPPSH 255
           +S G  ++++ +GK  PP  
Sbjct: 195 WSLGCTIVEMATGK--PPFI 212

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 4/123 (3%)

Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189
           LV   M    L  H+++        A  +  A  I   LE+   + R +Y DL    ++ 
Sbjct: 70  LVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEH-LHQRRIVYRDLKPENVLL 128

Query: 190 DDDVNPRLSCFGL---MKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
           DD  N R+S  GL   +K  +  +  +    +  PE L+          ++ G  L +++
Sbjct: 129 DDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMI 188

Query: 247 SGK 249
           +G+
Sbjct: 189 AGR 191

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 42/192 (21%), Positives = 74/192 (38%), Gaps = 32/192 (16%)

Query: 84  IAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142
           +AVK    S    D   FL EA  + +  ++ +  L+G   E   R ++ E M    L  
Sbjct: 39  VAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKS 98

Query: 143 HLFHWE---TQPMKWAMR--LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197
            L        +P    M+  L  A  +A+  +Y       ++ D+ A   +        L
Sbjct: 99  FLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN-HFIHRDIAARNCL--------L 149

Query: 198 SC-----------FGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGT 240
           +C           FG+ ++      Y         + + PPE    G  T ++ ++SFG 
Sbjct: 150 TCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGV 209

Query: 241 LLLDLLSGKHIP 252
           LL ++ S  ++P
Sbjct: 210 LLWEIFSLGYMP 221

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 39.0 bits (91), Expect = 0.001
 Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 23/199 (11%)

Query: 61  IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
           +V + G      +Y  K+  +  I  K          RQ LE  R     R   L  L  
Sbjct: 18  LVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVR-----RCPFLVTLH- 71

Query: 121 CCCEGDERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE---ALEYCTSKER 176
              + D +L L+ +Y+    L  HL+  E           V ++IAE   AL+    +  
Sbjct: 72  YAFQTDTKLHLILDYVNGGELFTHLYQREHFTES-----EVRVYIAEIVLALD-HLHQLG 125

Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMK-----NSRDGRSYSTNLAFTPPEYLRTGRVTP 231
            +Y D+    I+ D + +  L+ FGL K           S+   + +  PE +R G    
Sbjct: 126 IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGH 185

Query: 232 ESVM--YSFGTLLLDLLSG 248
           +  +  +S G L  +LL+G
Sbjct: 186 DKAVDWWSLGVLTFELLTG 204

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 38.7 bits (90), Expect = 0.002
 Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 13/164 (7%)

Query: 96  DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL-VAEYMPNDTLAKHLFHWETQPMKW 154
           D    + E R +   RN      L CC +  +RL  V E++    L   +FH +      
Sbjct: 38  DVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFD 94

Query: 155 AMRLRV-ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS-RDGRSY 212
             R R  A  I  AL +   K   +Y DL    ++ D + + +L+ FG+ K    +G++ 
Sbjct: 95  EARARFYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTT 153

Query: 213 STNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
           ST    TP    PE L+     P    ++ G LL ++L G H P
Sbjct: 154 ST-FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCG-HAP 195

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 19/177 (10%)

Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMP----N 137
           +AVK+   S     R F  E   +  L++  +    G C     R   LV EY+P     
Sbjct: 36  VAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLR 95

Query: 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197
           D L KH    + + +     L  A  I + +EY  SK R ++ DL    I+ + +   ++
Sbjct: 96  DYLQKHRERLDHRKL-----LLYASQICKGMEYLGSK-RYVHRDLATRNILVESENRVKI 149

Query: 198 SCFGLMKNSRDGRSYST-------NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
             FGL K     + Y          + +  PE L   + +  S ++SFG +L +L +
Sbjct: 150 GDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 206

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 9/180 (5%)

Query: 76  GKLENQFRIAVKRFNRSAWPDARQFL-EEARAVGQLRNR-RLANLLGCCCEGDERLLVAE 133
            K +   ++AVK    +A    R+ L  E + +  L N   + NLLG C  G   L++ E
Sbjct: 60  SKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITE 119

Query: 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 193
           Y     L   L       +     L  +  +A+ + +  SK   ++ DL A  ++     
Sbjct: 120 YCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNVLLTHGK 178

Query: 194 NPRLSCFGLMKNSRDGRSY-STNLAFTP-----PEYLRTGRVTPESVMYSFGTLLLDLLS 247
             ++  FGL ++  +  +Y     A  P     PE +     T ES ++S+G LL ++ S
Sbjct: 179 IVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFS 238

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 28/163 (17%)

Query: 103 EARAVGQLRNRRLANLLGCCCEGDERLL--VAEYMPNDTLAKHLFHWETQPMKWAMRLRV 160
           E R + ++ +  +  L     E D+R L  + EY+P   L  +L +        +  L  
Sbjct: 51  EKRVLKEVSHPFIIRLF--WTEHDQRFLYMLMEYVPGGELFSYLRNSGR--FSNSTGLFY 106

Query: 161 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP 220
           A  I  ALEY  SKE  +Y DL    I+ D + + +L+ FG  K  RD R+++  L  T 
Sbjct: 107 ASEIVCALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRD-RTWT--LCGT- 161

Query: 221 PEYLRTGRVTPESVM----------YSFGTLLLDLLSGKHIPP 253
           PEYL      PE +           ++ G L+ ++L G   PP
Sbjct: 162 PEYL-----APEVIQSKGHNKAVDWWALGILIYEMLVG--YPP 197

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 38.1 bits (89), Expect = 0.002
 Identities = 42/197 (21%), Positives = 80/197 (40%), Gaps = 13/197 (6%)

Query: 66  GEKAPNVVYKGK-LENQFRIAVKRFNR---SAWPDARQFLEEARAVGQLRNRRLANLLGC 121
           GE    VVYK +       +A+K+      S     +  L E + + +L +  +  LL  
Sbjct: 8   GEGTYGVVYKARDKLTGEIVAIKKIKLRFESEG-IPKTALREIKLLKELNHPNIIKLLDV 66

Query: 122 CCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHD 181
                +  LV E+M  DT    L     + +  ++       + + L +C      L+ D
Sbjct: 67  FRHKGDLYLVFEFM--DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFC-HSHGILHRD 123

Query: 182 LNAYRIVFDDDVNPRLSCFGLMKNSR-DGRSYSTNLA---FTPPEYLRTGRVTPESV-MY 236
           L    ++ + +   +L+ FGL ++     R Y+  +    +  PE L   +     V ++
Sbjct: 124 LKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIW 183

Query: 237 SFGTLLLDLLSGKHIPP 253
           S G +  +LLS + + P
Sbjct: 184 SVGCIFAELLSRRPLFP 200

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	264
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
PTZ00284	467	protein kinase; Provisional	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
KOG0696	683	consensus Serine/threonine protein kinase [Signal	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
KOG1152	772	consensus Signal transduction serine/threonine kin	100.0
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	100.0
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	100.0
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.98
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.98
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.97
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.97
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.97
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.97
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.97
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.97
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.97
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.97
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.96
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.96
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.96
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.95
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.95
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.94
PRK09188	365	serine/threonine protein kinase; Provisional	99.93
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.93
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.93
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.93
PLN00181	793	protein SPA1-RELATED; Provisional	99.92
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.91
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.91
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.9
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.9
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.9
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.89
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.87
PRK12274	218	serine/threonine protein kinase; Provisional	99.86
PRK10345	210	hypothetical protein; Provisional	99.86
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.84
smart00090	237	RIO RIO-like kinase.	99.84
PRK14879	211	serine/threonine protein kinase; Provisional	99.83
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.83
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.81
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.81
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.8
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.8
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.77
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.76
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.75
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.73
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.72
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.7
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.69
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.69
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.62
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.62
KOG1243	690	consensus Protein kinase [General function predict	99.59
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.53
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.51
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.45
KOG3087	229	consensus Serine/threonine protein kinase [General	99.42
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.41
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.39
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.36
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.29
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.27
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.24
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.23
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	99.13
COG0478	304	RIO-like serine/threonine protein kinase fused to	99.05
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.99
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.96
PRK09902	216	hypothetical protein; Provisional	98.93
COG4248	637	Uncharacterized protein with protein kinase and he	98.93
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.92
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.91
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.77
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.73
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.68
KOG1235	538	consensus Predicted unusual protein kinase [Genera	98.59
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.57
PF01636	239	APH: Phosphotransferase enzyme family This family	98.54
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	98.49
PLN02876	822	acyl-CoA dehydrogenase	98.47
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	98.43
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.36
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	98.31
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	98.22
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	98.18
PRK10593	297	hypothetical protein; Provisional	98.09
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	98.07
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.97
PRK05231	319	homoserine kinase; Provisional	97.85
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.84
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.83
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.83
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	97.81
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.79
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	97.71
PLN02756	418	S-methyl-5-thioribose kinase	97.7
KOG2270	520	consensus Serine/threonine protein kinase involved	97.7
KOG2268	465	consensus Serine/threonine protein kinase [Signal	97.69
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	97.46
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.39
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	97.37
PLN02236	344	choline kinase	97.32
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	97.26
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	97.15
PRK12396	409	5-methylribose kinase; Reviewed	97.02
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	96.97
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	96.82
COG2334	331	Putative homoserine kinase type II (protein kinase	96.8
PRK11768	325	serine/threonine protein kinase; Provisional	96.72
PTZ00384	383	choline kinase; Provisional	96.63
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	96.49
PRK06148	1013	hypothetical protein; Provisional	96.39
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	96.34
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	96.24
KOG1236	565	consensus Predicted unusual protein kinase [Genera	96.2
PF04655	253	APH_6_hur: Aminoglycoside/hydroxyurea antibiotic r	95.12
PRK10271	188	thiK thiamine kinase; Provisional	95.0

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-49  Score=325.94  Aligned_cols=198  Identities=20%  Similarity=0.314  Sum_probs=179.3

Q ss_pred             CccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCC--CChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      ..+|.+.++||.|+|++||+|+ ..++..||||.+.+.  .....+.+..|+.+|+.++|+|||.+++++..++.+++||
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM   88 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM   88 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence            4567788889999999999999 456899999999877  4455667889999999999999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC------CCeEEcccCCCccc
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD------VNPRLSCFGLMKNS  206 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~------~~~kl~dfg~~~~~  206 (264)
                      |||.||+|.++++  ..+.+++.+++.++.|++.||++||++ +|+||||||.|||++..      -.+||+|||+|+..
T Consensus        89 EyC~gGDLs~yi~--~~~~l~e~t~r~Fm~QLA~alq~L~~~-~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L  165 (429)
T KOG0595|consen   89 EYCNGGDLSDYIR--RRGRLPEATARHFMQQLASALQFLHEN-NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL  165 (429)
T ss_pred             EeCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence            9999999999997  445799999999999999999999999 99999999999999764      46899999999987


Q ss_pred             CCC---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       207 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .+.   ...+|++.|||||++..+.|+.|+|+||+|++||+|++|++||....
T Consensus       166 ~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t  218 (429)
T KOG0595|consen  166 QPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET  218 (429)
T ss_pred             CchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence            765   34589999999999999999999999999999999999999998543

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-47  Score=325.46  Aligned_cols=212  Identities=37%  Similarity=0.648  Sum_probs=189.6

Q ss_pred             cccccCHHHHHHHhCCCccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccc
Q 024659           40 VFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL  119 (264)
Q Consensus        40 ~~~~~~~~~~~~~~~~~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~  119 (264)
                      ..+.|++.++..+|++|+..+++   |+|+||.||+|..+++..||||++.........+|.+|++++.+++|||+++++
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~i---g~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~Ll  137 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLI---GEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLL  137 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcce---ecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEE
Confidence            67789999999999999999888   999999999999999899999988876643144599999999999999999999


Q ss_pred             eeeEeCC-cceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CceeeccCCCCeeeCCCCCeE
Q 024659          120 GCCCEGD-ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE--RALYHDLNAYRIVFDDDVNPR  196 (264)
Q Consensus       120 ~~~~~~~-~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~--~i~H~dl~~~Nil~~~~~~~k  196 (264)
                      |+|.+.+ +.+||+||+++|+|.+.+......+++|.++++|+.++|+||+|||+..  .|+|||||++|||+|+++++|
T Consensus       138 GyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK  217 (361)
T KOG1187|consen  138 GYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK  217 (361)
T ss_pred             EEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence            9999888 5999999999999999997533228899999999999999999999973  499999999999999999999


Q ss_pred             EcccCCCcccCC-CCcc----cccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          197 LSCFGLMKNSRD-GRSY----STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       197 l~dfg~~~~~~~-~~~~----~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      |+|||+++.... ....    .+|.+|+|||+...+..+.++||||||++|+|++||+++...
T Consensus       218 lsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~  280 (361)
T KOG1187|consen  218 LSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQ  280 (361)
T ss_pred             ccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCC
Confidence            999999976654 3222    789999999999999999999999999999999999977653

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-47  Score=310.05  Aligned_cols=200  Identities=21%  Similarity=0.258  Sum_probs=180.3

Q ss_pred             CCccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      +.+++++++.||+|+||+||.++ .+.++.+|+|++++..   ..+......|..+|.+++||.|++++-.|++...+|+
T Consensus        23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl  102 (357)
T KOG0598|consen   23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL  102 (357)
T ss_pred             ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence            34557888999999999999999 5568999999998653   2345678899999999999999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC---
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR---  207 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~---  207 (264)
                      |+||+.||.|...|.  ..+.+++..+..++..|+.||.|||++ ||+||||||+|||+|++|.++|+|||+++...   
T Consensus       103 Vld~~~GGeLf~hL~--~eg~F~E~~arfYlaEi~lAL~~LH~~-gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~  179 (357)
T KOG0598|consen  103 VLDYLNGGELFYHLQ--REGRFSEDRARFYLAEIVLALGYLHSK-GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG  179 (357)
T ss_pred             EEeccCCccHHHHHH--hcCCcchhHHHHHHHHHHHHHHHHHhC-CeeeccCCHHHeeecCCCcEEEeccccchhcccCC
Confidence            999999999999996  456799999999999999999999999 99999999999999999999999999998543   


Q ss_pred             -CCCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          208 -DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       208 -~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                       .....+||+.|||||++.+..|+..+|+||||+++|||++|.+||..+..
T Consensus       180 ~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~  230 (357)
T KOG0598|consen  180 DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV  230 (357)
T ss_pred             CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH
Confidence             23456899999999999999999999999999999999999999987664

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-46  Score=302.50  Aligned_cols=197  Identities=17%  Similarity=0.222  Sum_probs=177.0

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCc-ceEEEe
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE-RLLVAE  133 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-~~lv~e  133 (264)
                      ++.+.++.||.|+.|+||++.+ .+++.+|+|++.... ....+++.+|+++++..+|||||.++|.|..+.. ..|+||
T Consensus        79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE  158 (364)
T KOG0581|consen   79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME  158 (364)
T ss_pred             HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence            4567788999999999999995 568899999996553 3345679999999999999999999999999884 999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC--CCc
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRS  211 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~--~~~  211 (264)
                      ||++|||++++..  .+.+++.....++.++++||.|||+..+|+||||||+|||++..|.+||+|||.++...+  ...
T Consensus       159 YMDgGSLd~~~k~--~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~t  236 (364)
T KOG0581|consen  159 YMDGGSLDDILKR--VGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANT  236 (364)
T ss_pred             hcCCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhccc
Confidence            9999999999974  367999999999999999999999633999999999999999999999999999886544  356


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      +.||..|||||-+.+..|+.++||||||++++|+.+|+.|+...
T Consensus       237 fvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~  280 (364)
T KOG0581|consen  237 FVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPP  280 (364)
T ss_pred             ccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCc
Confidence            78999999999999999999999999999999999999998765

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=9.1e-48  Score=301.19  Aligned_cols=201  Identities=19%  Similarity=0.229  Sum_probs=177.1

Q ss_pred             CccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccce-eeEeCCc-ceE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLG-CCCEGDE-RLL  130 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~-~~~~~~~-~~l  130 (264)
                      ..+|+++++||.|.||.||++. ..+|..+|.|.++-..  ....+....|+.+|++|+||||+++++ .+.+++. ++|
T Consensus        18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni   97 (375)
T KOG0591|consen   18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI   97 (375)
T ss_pred             HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence            3457889999999999999999 7889999999998443  223456889999999999999999999 4555555 899


Q ss_pred             EEecCCCCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcC-CC--ceeeccCCCCeeeCCCCCeEEcccCCCcc
Q 024659          131 VAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSK-ER--ALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~-~~--i~H~dl~~~Nil~~~~~~~kl~dfg~~~~  205 (264)
                      +||+|.+|+|...+++.  ..+.+++..+++++.|++.||..+|.+ .+  ++||||||.||+++.+|.+||+|||+++.
T Consensus        98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~  177 (375)
T KOG0591|consen   98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF  177 (375)
T ss_pred             HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence            99999999999999754  456899999999999999999999993 14  89999999999999999999999999998


Q ss_pred             cCCC----CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          206 SRDG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       206 ~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ....    ....||+.||+||.+.+..|+.++||||+||++|||+.-++||.+..
T Consensus       178 l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n  232 (375)
T KOG0591|consen  178 LSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDN  232 (375)
T ss_pred             hcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCccccc
Confidence            7665    35689999999999999999999999999999999999999998763

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=9.4e-47  Score=308.88  Aligned_cols=200  Identities=19%  Similarity=0.254  Sum_probs=173.9

Q ss_pred             ccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCChh-------HHHHHHHHHHHhcCCCCCccccceeeEeCCcc
Q 024659           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD-------ARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  128 (264)
                      +-|.+.+.||+|+||.|-+|. ..+++.||+|.+++.....       .....+|+++|++|+||+|+++++++..++..
T Consensus       172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~  251 (475)
T KOG0615|consen  172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS  251 (475)
T ss_pred             ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence            446667789999999999999 6779999999998653222       23357999999999999999999999999999


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC---CCeEEcccCCCcc
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMKN  205 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~---~~~kl~dfg~~~~  205 (264)
                      |||+||+.||.|.+.+-  .+..+.+..-..++.|++.|+.|||++ ||+||||||+|||++.+   ..+||+|||+|+.
T Consensus       252 YmVlE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~avkYLH~~-GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~  328 (475)
T KOG0615|consen  252 YMVLEYVEGGELFDKVV--ANKYLREDLGKLLFKQLLTAVKYLHSQ-GIIHRDIKPENILLSNDAEDCLLKITDFGLAKV  328 (475)
T ss_pred             EEEEEEecCccHHHHHH--hccccccchhHHHHHHHHHHHHHHHHc-CcccccCCcceEEeccCCcceEEEecccchhhc
Confidence            99999999999999886  455678888899999999999999999 99999999999999765   7899999999998


Q ss_pred             cCCC---CcccccccccccccccCCC--CCC-ccceechHHHHHHHHhCCCCCCCCcccc
Q 024659          206 SRDG---RSYSTNLAFTPPEYLRTGR--VTP-ESVMYSFGTLLLDLLSGKHIPPSHVSSF  259 (264)
Q Consensus       206 ~~~~---~~~~~~~~y~aPE~~~~~~--~~~-~~DiwslG~~l~el~~g~~~~~~~~~~~  259 (264)
                      ....   .+.+||+.|.|||++.+..  +.+ ++|+||+||+||-+++|.+||+.+....
T Consensus       329 ~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~  388 (475)
T KOG0615|consen  329 SGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP  388 (475)
T ss_pred             cccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc
Confidence            7543   4678999999999998765  333 7899999999999999999999876653

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=7.6e-46  Score=310.31  Aligned_cols=197  Identities=23%  Similarity=0.281  Sum_probs=174.7

Q ss_pred             ccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeC--CcceEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLLV  131 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv  131 (264)
                      +.|+.+++||+|+||.||+++ ..+|+.||+|++....  .....-..+|+.+|++|.||||+++.+...+.  ..+|||
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV  196 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV  196 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence            568899999999999999999 6779999999998764  33455577999999999999999999999876  679999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC-
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-  210 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-  210 (264)
                      |||+++ +|.-++.. ..-.|++.++..++.|++.||.|+|.+ |++|||||.+|||||++|.+||+|||+|++..... 
T Consensus       197 FeYMdh-DL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~-gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~  273 (560)
T KOG0600|consen  197 FEYMDH-DLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSR-GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGS  273 (560)
T ss_pred             Eecccc-hhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhc-CeeeccccccceEEcCCCCEEeccccceeeccCCCC
Confidence            999988 58888753 455799999999999999999999999 99999999999999999999999999999765443 


Q ss_pred             ----cccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 ----SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 ----~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                          ....|.+|+|||.+.+.. |++..|+||.||||.||+.|+++|++..
T Consensus       274 ~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~t  324 (560)
T KOG0600|consen  274 APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRT  324 (560)
T ss_pred             cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCcc
Confidence                335689999999999876 9999999999999999999999998654

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-45  Score=309.41  Aligned_cols=195  Identities=29%  Similarity=0.434  Sum_probs=172.9

Q ss_pred             ccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChh--HHHHHHHHHHHhcCCCCCccccceeeEeCC-cceEEEecCCC
Q 024659           61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGD-ERLLVAEYMPN  137 (264)
Q Consensus        61 ~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~~~  137 (264)
                      +.+.+|.|+||+||++.+.+...||+|++.......  .+.|.+|+.+|.+++||||++++|+|..+. ..++||||+++
T Consensus        45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~  124 (362)
T KOG0192|consen   45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPG  124 (362)
T ss_pred             hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCC
Confidence            334479999999999999887669999998754322  458999999999999999999999998877 79999999999


Q ss_pred             CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-ceeeccCCCCeeeCCCC-CeEEcccCCCcccCC----CCc
Q 024659          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER-ALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRD----GRS  211 (264)
Q Consensus       138 ~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~-i~H~dl~~~Nil~~~~~-~~kl~dfg~~~~~~~----~~~  211 (264)
                      |+|.+++.......+++..++.|+.||++||.|||++ + ||||||||+|||++.++ ++||+|||+++....    ...
T Consensus       125 GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~-~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~  203 (362)
T KOG0192|consen  125 GSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE-GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTS  203 (362)
T ss_pred             CcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccC
Confidence            9999999754467899999999999999999999999 8 99999999999999997 999999999976543    223


Q ss_pred             cccccccccccccc--CCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          212 YSTNLAFTPPEYLR--TGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       212 ~~~~~~y~aPE~~~--~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ..||..|||||++.  ...++.++||||||+++|||+||+.||....
T Consensus       204 ~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~  250 (362)
T KOG0192|consen  204 VAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLA  250 (362)
T ss_pred             CCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCC
Confidence            57899999999999  5579999999999999999999999998654

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.3e-45  Score=315.50  Aligned_cols=196  Identities=17%  Similarity=0.218  Sum_probs=180.2

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCC---CChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      ..|+.-+.||+|+|+.+|.+++ +.|+.||+|++++.   .....+.+.+|+++.++|+|||||+++++|++.++.|||.
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            5577777789999999999996 88999999999873   3345677999999999999999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---  209 (264)
                      |+|..++|-.+++  ..+++++..++.++.||+.||.|||+. +|+|||||..|++++++.++||+|||+|......   
T Consensus        98 ELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~-~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Er  174 (592)
T KOG0575|consen   98 ELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSL-GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGER  174 (592)
T ss_pred             EecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhc-CceecccchhheeecCcCcEEecccceeeeecCcccc
Confidence            9999999999987  567899999999999999999999999 9999999999999999999999999999876643   


Q ss_pred             -CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 -~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                       .+.+||+.|.|||++.....+..+||||+||++|.|+.|++||...
T Consensus       175 k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk  221 (592)
T KOG0575|consen  175 KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK  221 (592)
T ss_pred             cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc
Confidence             3568999999999999888999999999999999999999999865

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-45  Score=289.61  Aligned_cols=199  Identities=18%  Similarity=0.220  Sum_probs=181.2

Q ss_pred             CccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCCh---hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      .++++.++.||.|+||.|.+++ ..+|..+|+|.+.+...-   +.+...+|-.+|+.+.||.++++++.+.+...+++|
T Consensus        43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv  122 (355)
T KOG0616|consen   43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV  122 (355)
T ss_pred             hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence            3457888999999999999999 567899999999876433   345578899999999999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-C
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-R  210 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-~  210 (264)
                      |||++||.|..+++  +.+.++++.++.++.||+.||.|||++ +|++|||||+|||+|.+|.+||.|||.|+..... -
T Consensus       123 meyv~GGElFS~Lr--k~~rF~e~~arFYAAeivlAleylH~~-~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~  199 (355)
T KOG0616|consen  123 MEYVPGGELFSYLR--KSGRFSEPHARFYAAEIVLALEYLHSL-DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTW  199 (355)
T ss_pred             EeccCCccHHHHHH--hcCCCCchhHHHHHHHHHHHHHHHHhc-CeeeccCChHHeeeccCCcEEEEeccceEEecCcEE
Confidence            99999999999997  556799999999999999999999999 9999999999999999999999999999876554 3


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                      ..+||+.|+|||.+....+...+|.||||+++|||+.|.+||..+..
T Consensus       200 TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~  246 (355)
T KOG0616|consen  200 TLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP  246 (355)
T ss_pred             EecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh
Confidence            45899999999999999999999999999999999999999987765

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=2.4e-45  Score=290.20  Aligned_cols=198  Identities=21%  Similarity=0.324  Sum_probs=173.4

Q ss_pred             ccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCC-hhH-HHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDA-RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~-~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      +.|+.++++|+|+||+||+++ .+.|+.||+|++..... ... +-..+|+++|++++|+|+|.++.+|.....+++|||
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE   81 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE   81 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence            347889999999999999999 56699999999986543 223 347899999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC-CC---
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR-DG---  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~-~~---  209 (264)
                      ||+. ++.+.+.+ ...+++...+..++.|++.|+.|+|++ +++||||||+||+|+.+|.+||+|||.|+... ++   
T Consensus        82 ~~dh-TvL~eLe~-~p~G~~~~~vk~~l~Q~l~ai~~cHk~-n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~Y  158 (396)
T KOG0593|consen   82 YCDH-TVLHELER-YPNGVPSELVKKYLYQLLKAIHFCHKN-NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNY  158 (396)
T ss_pred             ecch-HHHHHHHh-ccCCCCHHHHHHHHHHHHHHhhhhhhc-CeecccCChhheEEecCCcEEeccchhhHhhcCCcchh
Confidence            9987 45555543 556789999999999999999999999 99999999999999999999999999999776 33   


Q ss_pred             CcccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          210 RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                      ..+..|.+|+|||.+.+ ..|...+||||+||++.||++|++.+++.++
T Consensus       159 TDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SD  207 (396)
T KOG0593|consen  159 TDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSD  207 (396)
T ss_pred             hhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcch
Confidence            23567999999999987 5699999999999999999999999986653

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=3.2e-44  Score=279.02  Aligned_cols=197  Identities=23%  Similarity=0.299  Sum_probs=176.0

Q ss_pred             cccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCChh--HHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      .|..++.+|+|.||.||+|+ ..+|+.||+|+++..+..+  .....+|+..|+.++|+||+.++++|.+.+.+.||+||
T Consensus         3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf   82 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF   82 (318)
T ss_pred             hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence            57788889999999999999 5679999999998764332  34578999999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc---
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS---  211 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~---  211 (264)
                      ++. +|+..+++ +...++..++..++.++++|++|+|++ .|+||||||.|+|++.+|.+||+|||+++.......   
T Consensus        83 m~t-dLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~-~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~  159 (318)
T KOG0659|consen   83 MPT-DLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSK-WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQT  159 (318)
T ss_pred             ccc-cHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhh-hhhcccCCccceEEcCCCcEEeecccchhccCCCCcccc
Confidence            977 69999976 667888999999999999999999999 999999999999999999999999999997664432   


Q ss_pred             -ccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          212 -YSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       212 -~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                       ...|.+|+|||.+.+.. |+...||||.||++.||+-|.+.|++..+
T Consensus       160 ~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sD  207 (318)
T KOG0659|consen  160 HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSD  207 (318)
T ss_pred             cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCch
Confidence             25689999999998876 99999999999999999999999987654

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=1.8e-44  Score=304.24  Aligned_cols=205  Identities=16%  Similarity=0.149  Sum_probs=181.9

Q ss_pred             CCccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      ..+++++|+.||+|+||.||+++ .+.|..+|+|++++..   ..+...++.|-.+|...++++||+++-.|++...+||
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL  218 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL  218 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence            35778899999999999999999 5679999999999753   3345667889999999999999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC--
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--  208 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~--  208 (264)
                      ||||++||++..+|.  +...+++..+..++.+++.|+..+|+. |++||||||+|+|||..|.+||+||||+.-...  
T Consensus       219 iMEylPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~-gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~  295 (550)
T KOG0605|consen  219 IMEYLPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQL-GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKH  295 (550)
T ss_pred             EEEecCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHc-CcccccCChhheeecCCCCEeeccccccchhhhhh
Confidence            999999999999997  567899999999999999999999999 999999999999999999999999999751100  


Q ss_pred             -----------------------C--------------------------CcccccccccccccccCCCCCCccceechH
Q 024659          209 -----------------------G--------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFG  239 (264)
Q Consensus       209 -----------------------~--------------------------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG  239 (264)
                                             .                          -...||+.|+|||++.+..|+..+|+||||
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG  375 (550)
T KOG0605|consen  296 RIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLG  375 (550)
T ss_pred             hhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHH
Confidence                                   0                          013578999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCcccccee
Q 024659          240 TLLLDLLSGKHIPPSHVSSFLWL  262 (264)
Q Consensus       240 ~~l~el~~g~~~~~~~~~~~~~~  262 (264)
                      |++|||+.|.+||+++..+.+|+
T Consensus       376 ~ImyEmLvGyPPF~s~tp~~T~r  398 (550)
T KOG0605|consen  376 CIMYEMLVGYPPFCSETPQETYR  398 (550)
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHH
Confidence            99999999999999888776553

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-44  Score=303.79  Aligned_cols=196  Identities=30%  Similarity=0.468  Sum_probs=174.8

Q ss_pred             ccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCC
Q 024659           59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND  138 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  138 (264)
                      .+++++||+|.||.||.|.+++...||+|.++... -..+.|.+|+++|++|+|++|++++++|..+..++|||||++.|
T Consensus       208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G  286 (468)
T KOG0197|consen  208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG  286 (468)
T ss_pred             HHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence            46788999999999999999988899999998754 34567889999999999999999999999988999999999999


Q ss_pred             CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCcc-----c
Q 024659          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY-----S  213 (264)
Q Consensus       139 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~~-----~  213 (264)
                      +|.++|+...+..+...+.+.++.||+.|++||.++ ++|||||.+.||||+++..+||+|||+|+...+..-.     .
T Consensus       287 sLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~-~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~k  365 (468)
T KOG0197|consen  287 SLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK-NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGK  365 (468)
T ss_pred             cHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC-CccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCC
Confidence            999999876677899999999999999999999999 9999999999999999999999999999954433221     2


Q ss_pred             ccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       214 ~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      -...|.|||++..+.++.++|||||||+||||+|....++...
T Consensus       366 fPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~m  408 (468)
T KOG0197|consen  366 FPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGM  408 (468)
T ss_pred             CCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCC
Confidence            2478999999999999999999999999999999876665443

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=2e-44  Score=305.37  Aligned_cols=194  Identities=21%  Similarity=0.282  Sum_probs=176.0

Q ss_pred             cccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCCh--hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      .|.+.+.||+|+||.||||+ ..+.+.||+|.+.+....  +.+.+.+|+++++.++||||+.++++|++..++|+|.||
T Consensus         3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~   82 (808)
T KOG0597|consen    3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEY   82 (808)
T ss_pred             chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehh
Confidence            35566667999999999999 667889999999876433  456789999999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC----
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----  210 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~----  210 (264)
                      +.| +|..++.  .+..++++.+..++.+++.||+|||++ +|+|||+||.||+++.++.+|++|||+|+.+....    
T Consensus        83 a~g-~L~~il~--~d~~lpEe~v~~~a~~LVsaL~yLhs~-rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vlt  158 (808)
T KOG0597|consen   83 AVG-DLFTILE--QDGKLPEEQVRAIAYDLVSALYYLHSN-RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLT  158 (808)
T ss_pred             hhh-hHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhc-CcccccCCcceeeecCCCceeechhhhhhhcccCceeee
Confidence            977 8999996  567899999999999999999999999 99999999999999999999999999999766543    


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ...||+.|||||...++.|+..+|+||+||++||++.|++||...
T Consensus       159 sikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~  203 (808)
T KOG0597|consen  159 SIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR  203 (808)
T ss_pred             eccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH
Confidence            347899999999999999999999999999999999999999754

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-44  Score=299.75  Aligned_cols=196  Identities=18%  Similarity=0.265  Sum_probs=175.4

Q ss_pred             ccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCChhHHH--HHHHHHHHhcCC-CCCccccceeeEeCC-cceEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQ--FLEEARAVGQLR-NRRLANLLGCCCEGD-ERLLV  131 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~--~~~e~~~l~~l~-h~~i~~~~~~~~~~~-~~~lv  131 (264)
                      ++|.++++||.|+||.||+|+ ...++.||+|+++..-.. .++  -.+|+..|+++. ||||+++.+++.+.+ .+++|
T Consensus        10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s-~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV   88 (538)
T KOG0661|consen   10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV   88 (538)
T ss_pred             HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc-HHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence            468899999999999999999 778999999999865432 333  357999999998 999999999999887 89999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--  209 (264)
                      |||++. +|+++++++ ++.|++..++.|+.||++||+|+|.+ |++|||+||+|||+..+..+||+|||+|+.....  
T Consensus        89 fE~Md~-NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~-GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpP  165 (538)
T KOG0661|consen   89 FEFMDC-NLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKH-GFFHRDLKPENILISGNDVIKIADFGLAREVRSKPP  165 (538)
T ss_pred             HHhhhh-hHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhc-CcccccCChhheEecccceeEecccccccccccCCC
Confidence            999955 899999875 88999999999999999999999999 9999999999999999999999999999976554  


Q ss_pred             -Cccccccccccccccc-CCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 -RSYSTNLAFTPPEYLR-TGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 -~~~~~~~~y~aPE~~~-~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                       ..+..|.+|+|||++. +..|+.+.||||+||+++|+.+-+++|++..
T Consensus       166 YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~s  214 (538)
T KOG0661|consen  166 YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGAS  214 (538)
T ss_pred             cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCc
Confidence             4568899999999885 5569999999999999999999999998654

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=6.5e-43  Score=279.64  Aligned_cols=202  Identities=18%  Similarity=0.241  Sum_probs=176.2

Q ss_pred             HhCCCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChh--HHHHHHHHHHHhcCCCCCccccceeeEeC--C
Q 024659           52 ATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEG--D  126 (264)
Q Consensus        52 ~~~~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~  126 (264)
                      ..+..+.|+++.+|++|+||.||+|++ .+++.||+|+++......  .-...+|+.+|.+++||||+.+..+....  +
T Consensus        71 gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d  150 (419)
T KOG0663|consen   71 GCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMD  150 (419)
T ss_pred             CcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccc
Confidence            445567789999999999999999994 568999999998765322  23467899999999999999999988654  4


Q ss_pred             cceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCccc
Q 024659          127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (264)
Q Consensus       127 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~  206 (264)
                      .+||||||+++ +|..++.. -.++|...++..+..|+++|++|||.+ .|+|||||++|+|+++.|.+||+|||+|+..
T Consensus       151 ~iy~VMe~~Eh-DLksl~d~-m~q~F~~~evK~L~~QlL~glk~lH~~-wilHRDLK~SNLLm~~~G~lKiaDFGLAR~y  227 (419)
T KOG0663|consen  151 KIYIVMEYVEH-DLKSLMET-MKQPFLPGEVKTLMLQLLRGLKHLHDN-WILHRDLKTSNLLLSHKGILKIADFGLAREY  227 (419)
T ss_pred             eeeeeHHHHHh-hHHHHHHh-ccCCCchHHHHHHHHHHHHHHHHHhhc-eeEecccchhheeeccCCcEEecccchhhhh
Confidence            69999999988 59998864 447899999999999999999999999 9999999999999999999999999999987


Q ss_pred             CCC----CcccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          207 RDG----RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       207 ~~~----~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ..+    .....|.+|+|||.+.+.. |+...||||+||++.||++++++|++..
T Consensus       228 gsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~s  282 (419)
T KOG0663|consen  228 GSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKS  282 (419)
T ss_pred             cCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCc
Confidence            655    3346689999999999876 9999999999999999999999998654

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=5.8e-43  Score=295.29  Aligned_cols=200  Identities=21%  Similarity=0.238  Sum_probs=175.4

Q ss_pred             CccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l  130 (264)
                      -.++...+.||.|+|++|++++ ...++.+|+|++.+.-   ......+..|-++|.+| .||.|++++-.|++...+|+
T Consensus        72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF  151 (604)
T KOG0592|consen   72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF  151 (604)
T ss_pred             hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence            3456666778999999999999 5678999999997642   12234567788899999 79999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-  209 (264)
                      |+||+++|+|.++++  +.+.+++...+.++.+|+.||.|||+. |||||||||+|||+|.++.++|.|||.|+.+... 
T Consensus       152 vLe~A~nGdll~~i~--K~Gsfde~caR~YAAeIldAleylH~~-GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~  228 (604)
T KOG0592|consen  152 VLEYAPNGDLLDLIK--KYGSFDETCARFYAAEILDALEYLHSN-GIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQ  228 (604)
T ss_pred             EEEecCCCcHHHHHH--HhCcchHHHHHHHHHHHHHHHHHHHhc-CceeccCChhheeEcCCCcEEEeeccccccCChhh
Confidence            999999999999997  456799999999999999999999999 9999999999999999999999999999854321 


Q ss_pred             ----------------CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCccc
Q 024659          210 ----------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS  258 (264)
Q Consensus       210 ----------------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~~  258 (264)
                                      ..+.||..|.+||++.++..++.+|+|+|||+||+|+.|++||.+...-
T Consensus       229 ~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney  293 (604)
T KOG0592|consen  229 KSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY  293 (604)
T ss_pred             ccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH
Confidence                            2367899999999999999999999999999999999999999765443

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-42  Score=299.27  Aligned_cols=203  Identities=19%  Similarity=0.280  Sum_probs=178.3

Q ss_pred             CCCccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcc
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDER  128 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~  128 (264)
                      -+..++++++.||.|+||+|+++. ..+++.+|||.+++..   ..+.+..+.|-+++... +||.+++++..|++.+++
T Consensus       365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l  444 (694)
T KOG0694|consen  365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL  444 (694)
T ss_pred             ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence            345667899999999999999999 5568899999999763   33456677787777776 599999999999999999


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC-
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR-  207 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~-  207 (264)
                      ++||||+.||++..+.   ..+.+++..+..++..|+.||.|||++ ||||||||.+|||+|.+|.+||+|||+++..- 
T Consensus       445 ~fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~-~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~  520 (694)
T KOG0694|consen  445 FFVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHEN-GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMG  520 (694)
T ss_pred             EEEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhc-CceeeecchhheEEcccCcEEecccccccccCC
Confidence            9999999999854443   446799999999999999999999999 99999999999999999999999999998543 


Q ss_pred             ---CCCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCccccc
Q 024659          208 ---DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSSFL  260 (264)
Q Consensus       208 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~~~~  260 (264)
                         ...+.+||+.|+|||++.+..|+..+|+|||||++|||+.|++||+++..+.+
T Consensus       521 ~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~  576 (694)
T KOG0694|consen  521 QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEV  576 (694)
T ss_pred             CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence               34567899999999999999999999999999999999999999997776543

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-41  Score=289.66  Aligned_cols=198  Identities=21%  Similarity=0.247  Sum_probs=175.4

Q ss_pred             CccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCC----CC-hhHHHHHHHHHHHhcCC-CCCccccceeeEeCCcc
Q 024659           56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS----AW-PDARQFLEEARAVGQLR-NRRLANLLGCCCEGDER  128 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~----~~-~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~  128 (264)
                      ...|.+.+.||+|+||+|+.+. ...+..||+|.++..    .. ...+.+.+|+.+++.++ ||||+++++++......
T Consensus        16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~   95 (370)
T KOG0583|consen   16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKI   95 (370)
T ss_pred             cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeE
Confidence            4567888899999999999998 556899999987764    11 22345678999999999 99999999999999999


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC-CCeEEcccCCCcccC
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSR  207 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~-~~~kl~dfg~~~~~~  207 (264)
                      ++||||+.+|+|.+++.+  ...+.+..+..+++|++.|++|+|+. ||+||||||+||+++.+ +++||+|||++....
T Consensus        96 ~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~-gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~  172 (370)
T KOG0583|consen   96 YIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSR-GIVHRDLKPENILLDGNEGNLKLSDFGLSAISP  172 (370)
T ss_pred             EEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhC-CEeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence            999999999999999974  56788899999999999999999999 99999999999999999 999999999998762


Q ss_pred             ----CCCcccccccccccccccCCC-CC-CccceechHHHHHHHHhCCCCCCCCc
Q 024659          208 ----DGRSYSTNLAFTPPEYLRTGR-VT-PESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       208 ----~~~~~~~~~~y~aPE~~~~~~-~~-~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                          ......|++.|+|||++.+.. |+ .++||||+|++||.|++|..||....
T Consensus       173 ~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~  227 (370)
T KOG0583|consen  173 GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN  227 (370)
T ss_pred             CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc
Confidence                335678999999999999887 86 58999999999999999999998643

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-42  Score=292.22  Aligned_cols=195  Identities=18%  Similarity=0.310  Sum_probs=178.3

Q ss_pred             ccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      ..|....+||+|+.|.||.+. ..+++.||+|++........+-+.+|+.+|+..+|+|||++++.|...+.+|.||||+
T Consensus       273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym  352 (550)
T KOG0578|consen  273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM  352 (550)
T ss_pred             hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence            446777888999999999999 6678899999999877666677899999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----Cc
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS  211 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~~  211 (264)
                      ++|+|.+.+.   ...+++.++..|+++++.||.|||.+ ||+|||||.+|||++.+|.+||+|||++......    ..
T Consensus       353 ~ggsLTDvVt---~~~~~E~qIA~Icre~l~aL~fLH~~-gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~T  428 (550)
T KOG0578|consen  353 EGGSLTDVVT---KTRMTEGQIAAICREILQGLKFLHAR-GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRST  428 (550)
T ss_pred             CCCchhhhhh---cccccHHHHHHHHHHHHHHHHHHHhc-ceeeeccccceeEeccCCcEEEeeeeeeeccccccCcccc
Confidence            9999999984   44599999999999999999999999 9999999999999999999999999998766543    35


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..||+.|||||+.....|.++.||||||++++||+-|++||..+
T Consensus       429 mVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE  472 (550)
T KOG0578|consen  429 MVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNE  472 (550)
T ss_pred             ccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCC
Confidence            68999999999999999999999999999999999999999853

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-42  Score=282.01  Aligned_cols=194  Identities=22%  Similarity=0.311  Sum_probs=168.2

Q ss_pred             ccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCC--cceEEEecC
Q 024659           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD--ERLLVAEYM  135 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~  135 (264)
                      +...+.||+|+||.||++... +|...|+|.+........+.+.+|+.+|.+++|||||+++|......  .+++.|||+
T Consensus        19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~   98 (313)
T KOG0198|consen   19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYA   98 (313)
T ss_pred             hhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeecc
Confidence            455667799999999999954 48899999998765444677899999999999999999999854444  588999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC-CCCeEEcccCCCcccCC------
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSRD------  208 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~-~~~~kl~dfg~~~~~~~------  208 (264)
                      ++|+|.+++.+..+ .+++..++.+.+||+.||.|||++ |++|+||||+|||++. ++.+||+|||+++....      
T Consensus        99 ~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~-g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~  176 (313)
T KOG0198|consen   99 PGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSK-GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSD  176 (313)
T ss_pred             CCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhC-CEeccCcccceEEEeCCCCeEEeccCcccccccccccccc
Confidence            99999999976444 799999999999999999999999 9999999999999999 79999999999876542      


Q ss_pred             -CCcccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCC
Q 024659          209 -GRSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       209 -~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                       .....||+.|||||++..+. ..+.+|||||||++.||+||++|+..
T Consensus       177 ~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~  224 (313)
T KOG0198|consen  177 SELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSE  224 (313)
T ss_pred             ccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchh
Confidence             23467899999999999643 44599999999999999999888775

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=1.4e-41  Score=291.57  Aligned_cols=196  Identities=13%  Similarity=0.123  Sum_probs=171.5

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      +|++++.||+|+||+||++.. .+++.+|+|++....   ......+.+|+.++.+++|+||+++++.+.+....++|||
T Consensus         2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E   81 (363)
T cd05628           2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIME   81 (363)
T ss_pred             CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEc
Confidence            467888899999999999985 468899999997532   1223467889999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----  209 (264)
                      |+++++|.+++.  ....+++..+..++.|++.||.|||++ |++||||||+||+++.++.+||+|||+++.....    
T Consensus        82 ~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~-givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~  158 (363)
T cd05628          82 FLPGGDMMTLLM--KKDTLTEEETQFYIAETVLAIDSIHQL-GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE  158 (363)
T ss_pred             CCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence            999999999986  345789999999999999999999999 9999999999999999999999999998643211    


Q ss_pred             -----------------------------------CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          210 -----------------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       210 -----------------------------------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                                                         ....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~  238 (363)
T cd05628         159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS  238 (363)
T ss_pred             ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence                                               123578999999999988999999999999999999999999975


Q ss_pred             Cc
Q 024659          255 HV  256 (264)
Q Consensus       255 ~~  256 (264)
                      ..
T Consensus       239 ~~  240 (363)
T cd05628         239 ET  240 (363)
T ss_pred             CC
Confidence            43

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.6e-41  Score=274.93  Aligned_cols=200  Identities=17%  Similarity=0.212  Sum_probs=172.8

Q ss_pred             CccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCCh--hHHHHHHHHHHHhcCCCCC-ccccceeeEeCC-----
Q 024659           56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRR-LANLLGCCCEGD-----  126 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~-----  126 (264)
                      ...|..+++||+|+||+||+|+ ..+|+.||+|++......  -.....+|+.+++.++|+| |+++++++.+.+     
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~   89 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI   89 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence            3446677888999999999999 677899999999876432  2345789999999999999 999999998877     


Q ss_pred             -cceEEEecCCCCCHHHhhhcCCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCC
Q 024659          127 -ERLLVAEYMPNDTLAKHLFHWET--QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (264)
Q Consensus       127 -~~~lv~e~~~~~sL~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~  203 (264)
                       .+++|+||+.. +|..++.....  ..++...+..++.||+.||+|||++ +|+||||||.||+|+++|.+||+|||+|
T Consensus        90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~-~IlHRDLKPQNlLi~~~G~lKlaDFGlA  167 (323)
T KOG0594|consen   90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH-GILHRDLKPQNLLISSSGVLKLADFGLA  167 (323)
T ss_pred             ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC-CeecccCCcceEEECCCCcEeeeccchH
Confidence             78899999966 69999975432  4678889999999999999999999 9999999999999999999999999999


Q ss_pred             cccCCC----CcccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          204 KNSRDG----RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       204 ~~~~~~----~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                      +...-+    ....+|..|+|||++.+. .|+...||||+||+++||+++++.|++...
T Consensus       168 ra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se  226 (323)
T KOG0594|consen  168 RAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE  226 (323)
T ss_pred             HHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH
Confidence            865422    234678999999999987 499999999999999999999999987654

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=7.3e-42  Score=291.89  Aligned_cols=202  Identities=19%  Similarity=0.351  Sum_probs=173.3

Q ss_pred             CccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      +....+..+||+|.||+||+|.|.+  .||||.++....  +..+.|++|+.++++-+|.||+-+.|+|..+.. .||+.
T Consensus       391 ~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTq  467 (678)
T KOG0193|consen  391 PEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQ  467 (678)
T ss_pred             HHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeeh
Confidence            3445677789999999999999887  499999987643  446789999999999999999999999988776 99999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC------
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR------  207 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~------  207 (264)
                      +|+|.+|+.++.. ....|...+.+.|++||+.|+.|||.+ +|||+|||..||++.+++++||+|||++..-.      
T Consensus       468 wCeGsSLY~hlHv-~etkfdm~~~idIAqQiaqGM~YLHAK-~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~  545 (678)
T KOG0193|consen  468 WCEGSSLYTHLHV-QETKFDMNTTIDIAQQIAQGMDYLHAK-NIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQ  545 (678)
T ss_pred             hccCchhhhhccc-hhhhhhHHHHHHHHHHHHHhhhhhhhh-hhhhhhccccceEEccCCcEEEecccceeeeeeecccc
Confidence            9999999999964 446788999999999999999999999 99999999999999999999999999986422      


Q ss_pred             CCCcccccccccccccccCC---CCCCccceechHHHHHHHHhCCCCCCCCcc-cccee
Q 024659          208 DGRSYSTNLAFTPPEYLRTG---RVTPESVMYSFGTLLLDLLSGKHIPPSHVS-SFLWL  262 (264)
Q Consensus       208 ~~~~~~~~~~y~aPE~~~~~---~~~~~~DiwslG~~l~el~~g~~~~~~~~~-~~~~~  262 (264)
                      +-....+...|||||++..+   +|++++||||||+++|||++|.-|+..... .++|-
T Consensus       546 q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifm  604 (678)
T KOG0193|consen  546 QLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFM  604 (678)
T ss_pred             ccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEE
Confidence            12234567889999999643   599999999999999999999999984443 46664

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=1.9e-41  Score=292.39  Aligned_cols=196  Identities=18%  Similarity=0.183  Sum_probs=174.5

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC-C-----CCccccceeeEeCCcceE
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-N-----RRLANLLGCCCEGDERLL  130 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-----~~i~~~~~~~~~~~~~~l  130 (264)
                      .|++++.||+|+||.|.++.+ ..++.||||+++... ....+...|+.+|..|+ |     -|+|++++++...++.||
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci  265 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI  265 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence            568899999999999999995 569999999998754 34556778999999986 3     379999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC--CCeEEcccCCCcccCC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD--VNPRLSCFGLMKNSRD  208 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~--~~~kl~dfg~~~~~~~  208 (264)
                      |+|.+.. +|+++++....++++...++.++.||+.||.+||+. +|||+||||+|||+.+.  ..+||+|||.++...+
T Consensus       266 VfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l-~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q  343 (586)
T KOG0667|consen  266 VFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL-GIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ  343 (586)
T ss_pred             eehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCChhheeeccCCcCceeEEecccccccCC
Confidence            9999954 899999988888999999999999999999999999 99999999999999743  5799999999987655


Q ss_pred             C-CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 G-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 ~-~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      . -.+..+..|+|||++.+..|+.+.||||||||++||++|.++|+++.
T Consensus       344 ~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~n  392 (586)
T KOG0667|consen  344 RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDN  392 (586)
T ss_pred             cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCC
Confidence            4 35677899999999999999999999999999999999999998654

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=5.1e-41  Score=289.93  Aligned_cols=196  Identities=18%  Similarity=0.186  Sum_probs=170.6

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      .|++++.||+|+||+||++.+ .+++.+|+|++....   ......+.+|++++++++|+||+++++++.+.+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            467888999999999999994 568899999997542   2234568899999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC-----
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-----  208 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~-----  208 (264)
                      |+++++|.+++.  ....+++..+..++.||+.||.|||+. +|+||||||+||+++.++.++|+|||++.....     
T Consensus        82 ~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~~LH~~-givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~  158 (381)
T cd05626          82 YIPGGDMMSLLI--RMEVFPEVLARFYIAELTLAIESVHKM-GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSK  158 (381)
T ss_pred             cCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccc
Confidence            999999999986  344688889999999999999999999 999999999999999999999999998753210     


Q ss_pred             ----------------------------------------------CCcccccccccccccccCCCCCCccceechHHHH
Q 024659          209 ----------------------------------------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLL  242 (264)
Q Consensus       209 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l  242 (264)
                                                                    .....||..|+|||++.+..++.++|||||||++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il  238 (381)
T cd05626         159 YYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL  238 (381)
T ss_pred             cccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence                                                          0123578999999999988899999999999999


Q ss_pred             HHHHhCCCCCCCCc
Q 024659          243 LDLLSGKHIPPSHV  256 (264)
Q Consensus       243 ~el~~g~~~~~~~~  256 (264)
                      |||++|+.||....
T Consensus       239 ~elltG~~Pf~~~~  252 (381)
T cd05626         239 FEMLVGQPPFLAPT  252 (381)
T ss_pred             HHHHhCCCCCcCCC
Confidence            99999999997543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=6.8e-41  Score=274.73  Aligned_cols=207  Identities=19%  Similarity=0.210  Sum_probs=181.6

Q ss_pred             hCCCccccccccCCCCCCCeEEEEEeCC-CCEEEEEEeCCCCChh---HHHHHHHHHHHhcCCCCCccccceeeEeCCcc
Q 024659           53 TSGFAMENIVSEHGEKAPNVVYKGKLEN-QFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (264)
Q Consensus        53 ~~~~~~~~~l~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  128 (264)
                      .-+++.+++++.||.|.-|+||++.+.+ +..+|+|++.+.....   ..++..|-++|..++||.+..+|+.+..+...
T Consensus        73 ~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~  152 (459)
T KOG0610|consen   73 SLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYS  152 (459)
T ss_pred             ccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecccee
Confidence            3456778999999999999999999654 6899999999764333   44577899999999999999999999999999


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC-
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR-  207 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~-  207 (264)
                      |++||||+||+|..+..+..++.+++..++.++..++.||.|||-. |||+|||||+||||-++|.+.|+||.++.... 
T Consensus       153 cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml-GivYRDLKPENILvredGHIMLsDFDLS~~~~~  231 (459)
T KOG0610|consen  153 CLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML-GIVYRDLKPENILVREDGHIMLSDFDLSLRCPV  231 (459)
T ss_pred             EEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh-ceeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence            9999999999999998877788899999999999999999999999 99999999999999999999999999854110 


Q ss_pred             ---------------------------------C-C-------------------------CcccccccccccccccCCC
Q 024659          208 ---------------------------------D-G-------------------------RSYSTNLAFTPPEYLRTGR  228 (264)
Q Consensus       208 ---------------------------------~-~-------------------------~~~~~~~~y~aPE~~~~~~  228 (264)
                                                       . .                         ....||..|.|||++.+..
T Consensus       232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G  311 (459)
T KOG0610|consen  232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG  311 (459)
T ss_pred             CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence                                             0 0                         0125678899999999999


Q ss_pred             CCCccceechHHHHHHHHhCCCCCCCCccccc
Q 024659          229 VTPESVMYSFGTLLLDLLSGKHIPPSHVSSFL  260 (264)
Q Consensus       229 ~~~~~DiwslG~~l~el~~g~~~~~~~~~~~~  260 (264)
                      .+..+|+|+|||++|||++|..||.+...+.+
T Consensus       312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~T  343 (459)
T KOG0610|consen  312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKET  343 (459)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCcCCCCchhh
Confidence            99999999999999999999999987766543

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=5.6e-41  Score=289.84  Aligned_cols=196  Identities=18%  Similarity=0.193  Sum_probs=170.2

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      .|++++.||+|+||.||++.. .+++.+|+|.+....   ......+.+|++++++++|+||+++++.+.+.+..++|||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            467888999999999999994 568899999997542   2234567889999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC-----
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-----  208 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~-----  208 (264)
                      |+++++|.+++.+  ...+++..+..++.||+.||.|||++ +|+||||||+||+++.++.+||+|||++.....     
T Consensus        82 ~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~al~~lH~~-~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~  158 (382)
T cd05625          82 YIPGGDMMSLLIR--MGIFPEDLARFYIAELTCAVESVHKM-GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK  158 (382)
T ss_pred             CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEEeECCCCcccccccccc
Confidence            9999999998863  34688899999999999999999999 999999999999999999999999998742110     


Q ss_pred             ----------------------------------------------CCcccccccccccccccCCCCCCccceechHHHH
Q 024659          209 ----------------------------------------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLL  242 (264)
Q Consensus       209 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l  242 (264)
                                                                    .....+|+.|+|||++.+..++.++|||||||++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil  238 (382)
T cd05625         159 YYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL  238 (382)
T ss_pred             ccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHH
Confidence                                                          0113578899999999988899999999999999


Q ss_pred             HHHHhCCCCCCCCc
Q 024659          243 LDLLSGKHIPPSHV  256 (264)
Q Consensus       243 ~el~~g~~~~~~~~  256 (264)
                      |||++|++||....
T Consensus       239 ~elltG~~Pf~~~~  252 (382)
T cd05625         239 YEMLVGQPPFLAQT  252 (382)
T ss_pred             HHHHhCCCCCCCCC
Confidence            99999999997543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.8e-41  Score=289.75  Aligned_cols=196  Identities=17%  Similarity=0.128  Sum_probs=170.2

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      .|.+++.||.|+||.||++.. .+++.||+|++....   ......+.+|++++++++||||+++++++.+.+..++|||
T Consensus         2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E   81 (377)
T cd05629           2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME   81 (377)
T ss_pred             CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence            467888899999999999984 568899999986532   2234567889999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----  209 (264)
                      |+++++|.+++.  ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||+++.....    
T Consensus        82 ~~~gg~L~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~-givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~  158 (377)
T cd05629          82 FLPGGDLMTMLI--KYDTFSEDVTRFYMAECVLAIEAVHKL-GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA  158 (377)
T ss_pred             CCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence            999999999986  345688999999999999999999999 9999999999999999999999999998532110    


Q ss_pred             -----------------------------------------------CcccccccccccccccCCCCCCccceechHHHH
Q 024659          210 -----------------------------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLL  242 (264)
Q Consensus       210 -----------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l  242 (264)
                                                                     ....+|+.|+|||++.+..++.++|||||||++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil  238 (377)
T cd05629         159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM  238 (377)
T ss_pred             cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence                                                           013578899999999988899999999999999


Q ss_pred             HHHHhCCCCCCCCc
Q 024659          243 LDLLSGKHIPPSHV  256 (264)
Q Consensus       243 ~el~~g~~~~~~~~  256 (264)
                      |||++|..||....
T Consensus       239 ~elltG~~Pf~~~~  252 (377)
T cd05629         239 FECLIGWPPFCSEN  252 (377)
T ss_pred             hhhhcCCCCCCCCC
Confidence            99999999997543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=6.3e-41  Score=283.95  Aligned_cols=198  Identities=16%  Similarity=0.214  Sum_probs=174.8

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      ++.|++++.||+|+||.||++.+ .+++.||+|.+....   ....+.+.+|+.++++++||||+++++++...+..++|
T Consensus        17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   96 (329)
T PTZ00263         17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL   96 (329)
T ss_pred             chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence            45688889999999999999995 458899999997532   12345688999999999999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-C
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-R  210 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-~  210 (264)
                      |||+.+++|.+++..  ...+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++...... .
T Consensus        97 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~  173 (329)
T PTZ00263         97 LEFVVGGELFTHLRK--AGRFPNDVAKFYHAELVLAFEYLHSK-DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTF  173 (329)
T ss_pred             EcCCCCChHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcc
Confidence            999999999999863  45688889999999999999999999 9999999999999999999999999998865433 3


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ...+++.|+|||++.+..++.++|||||||++|+|++|..||....
T Consensus       174 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~  219 (329)
T PTZ00263        174 TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT  219 (329)
T ss_pred             eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC
Confidence            3568899999999998889999999999999999999999997543

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.1e-41  Score=288.89  Aligned_cols=196  Identities=16%  Similarity=0.162  Sum_probs=171.3

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      +|++++.||.|+||.||++.. .+++.||+|++....   ......+.+|++++..++|+||+++++++.+++..++|||
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (364)
T cd05599           2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME   81 (364)
T ss_pred             CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence            467888899999999999995 468899999997532   2234557889999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC---
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~---  210 (264)
                      |+++++|.+++..  ...+++..+..++.|++.||.|||++ +++||||||+||+++.++.++|+|||++.......   
T Consensus        82 ~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~  158 (364)
T cd05599          82 YLPGGDMMTLLMK--KDTFTEEETRFYIAETILAIDSIHKL-GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE  158 (364)
T ss_pred             CCCCcHHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence            9999999999863  44689999999999999999999999 99999999999999999999999999986432110   


Q ss_pred             ---------------------------------------cccccccccccccccCCCCCCccceechHHHHHHHHhCCCC
Q 024659          211 ---------------------------------------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI  251 (264)
Q Consensus       211 ---------------------------------------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~  251 (264)
                                                             ...||+.|+|||++.+..++.++|||||||++|||++|..|
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P  238 (364)
T cd05599         159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP  238 (364)
T ss_pred             ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence                                                   12478999999999988899999999999999999999999


Q ss_pred             CCCCc
Q 024659          252 PPSHV  256 (264)
Q Consensus       252 ~~~~~  256 (264)
                      |....
T Consensus       239 f~~~~  243 (364)
T cd05599         239 FCSDN  243 (364)
T ss_pred             CCCCC
Confidence            97543

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.6e-41  Score=280.11  Aligned_cols=196  Identities=19%  Similarity=0.224  Sum_probs=172.9

Q ss_pred             cccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCC---hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      .|++++.||+|+||.||++... +++.||+|.+.....   ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   81 (291)
T cd05612           2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME   81 (291)
T ss_pred             CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence            4677888999999999999954 688999999975321   234568889999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-Ccc
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY  212 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-~~~  212 (264)
                      |+++++|.+++.  ....+++..+..++.|++.||.|||++ |++||||||+||+++.++.+||+|||++...... ...
T Consensus        82 ~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~  158 (291)
T cd05612          82 YVPGGELFSYLR--NSGRFSNSTGLFYASEIVCALEYLHSK-EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTL  158 (291)
T ss_pred             CCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECCCCCEEEEecCcchhccCCcccc
Confidence            999999999986  345688999999999999999999999 9999999999999999999999999998765433 234


Q ss_pred             cccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       213 ~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .+++.|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus       159 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~  202 (291)
T cd05612         159 CGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDN  202 (291)
T ss_pred             cCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            68899999999998889999999999999999999999997543

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.9e-41  Score=277.34  Aligned_cols=202  Identities=17%  Similarity=0.216  Sum_probs=178.9

Q ss_pred             CCCccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      .+-+.|++...||.|.-++||+|+ ...+..||+|+++.+... +...+.+|+..+..++||||++++..|..+..+|+|
T Consensus        23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV  102 (516)
T KOG0582|consen   23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV  102 (516)
T ss_pred             CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence            344668888899999999999999 677899999999976433 357899999999999999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--  209 (264)
                      |+|+.+||+.++++..-..++.+..+..|++++++||.|||.+ |.||||||+.||||+.+|.+||+|||........  
T Consensus       103 mpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~-G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~  181 (516)
T KOG0582|consen  103 MPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN-GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD  181 (516)
T ss_pred             ehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc-CceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence            9999999999999876667899999999999999999999999 9999999999999999999999999975433221  


Q ss_pred             ------CcccccccccccccccCC--CCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 ------RSYSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ------~~~~~~~~y~aPE~~~~~--~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                            ....+++.|||||++..+  .|+.|+||||||++..||.+|..||..-.
T Consensus       182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~p  236 (516)
T KOG0582|consen  182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYP  236 (516)
T ss_pred             eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCC
Confidence                  445789999999997544  49999999999999999999999997544

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=9e-41  Score=283.96  Aligned_cols=200  Identities=18%  Similarity=0.222  Sum_probs=174.4

Q ss_pred             CCccccccccCCCCCCCeEEEEEeC-C-CCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcce
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKLE-N-QFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~~-~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  129 (264)
                      .+..|++++.||.|+||.||+|.+. . +..||+|.+....   ....+.+.+|+++++.++||||+++++++...+..+
T Consensus        28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~  107 (340)
T PTZ00426         28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY  107 (340)
T ss_pred             ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence            3456888899999999999999843 3 3689999986432   223456788999999999999999999999999999


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~  209 (264)
                      +||||+++++|.+++.  ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.++|+|||++......
T Consensus       108 lv~Ey~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~  184 (340)
T PTZ00426        108 LVLEFVIGGEFFTFLR--RNKRFPNDVGCFYAAQIVLIFEYLQSL-NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR  184 (340)
T ss_pred             EEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEccCCCHHHEEECCCCCEEEecCCCCeecCCC
Confidence            9999999999999986  345688999999999999999999999 9999999999999999999999999998865432


Q ss_pred             -CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       210 -~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                       ....+|+.|+|||++.+..++.++|||||||++|||++|..||.....
T Consensus       185 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~  233 (340)
T PTZ00426        185 TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP  233 (340)
T ss_pred             cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH
Confidence             345688999999999988899999999999999999999999976543

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=5.8e-41  Score=289.17  Aligned_cols=196  Identities=18%  Similarity=0.193  Sum_probs=170.6

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      .|++++.||+|+||.||++.. .+++.||+|.+....   ......+.+|++++++++|+||+++++.+.+.+..++|||
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E   81 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence            578899999999999999994 568899999997532   1234557889999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC-----
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-----  208 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~-----  208 (264)
                      |+++++|.+++.  ....+++..+..++.||+.||.|||++ +|+||||||+||+++.++.++|+|||++.....     
T Consensus        82 ~~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~  158 (376)
T cd05598          82 YIPGGDMMSLLI--RLGIFEEDLARFYIAELTCAIESVHKM-GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK  158 (376)
T ss_pred             CCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccc
Confidence            999999999986  345688889999999999999999999 999999999999999999999999998742210     


Q ss_pred             ------------------------------------------CCcccccccccccccccCCCCCCccceechHHHHHHHH
Q 024659          209 ------------------------------------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLL  246 (264)
Q Consensus       209 ------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~  246 (264)
                                                                .....||+.|+|||++.+..++.++|||||||++|||+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell  238 (376)
T cd05598         159 YYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML  238 (376)
T ss_pred             ccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehh
Confidence                                                      01235788999999999888999999999999999999


Q ss_pred             hCCCCCCCCc
Q 024659          247 SGKHIPPSHV  256 (264)
Q Consensus       247 ~g~~~~~~~~  256 (264)
                      +|+.||....
T Consensus       239 ~G~~Pf~~~~  248 (376)
T cd05598         239 VGQPPFLADT  248 (376)
T ss_pred             hCCCCCCCCC
Confidence            9999997544

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=1.9e-40  Score=275.66  Aligned_cols=197  Identities=19%  Similarity=0.231  Sum_probs=171.4

Q ss_pred             ccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCC---hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      |+.++.||+|+||.||++. ..+++.||+|.+.....   .....+.+|+.++.+++|++|+++++++...+..++|+||
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence            4566778999999999999 46789999999875432   2233577899999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---Cc
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RS  211 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---~~  211 (264)
                      +++++|.+.+.......+++..+..++.|++.||.|||++ +++||||||+||++++++.++|+|||++......   ..
T Consensus        82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~  160 (285)
T cd05631          82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE-RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRG  160 (285)
T ss_pred             cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecC
Confidence            9999999887643445689999999999999999999999 9999999999999999999999999998765432   23


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ..++..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       161 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~  205 (285)
T cd05631         161 RVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRK  205 (285)
T ss_pred             CCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCC
Confidence            467899999999998899999999999999999999999997543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=1.3e-40  Score=281.27  Aligned_cols=190  Identities=19%  Similarity=0.215  Sum_probs=167.2

Q ss_pred             cCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCC
Q 024659           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT  139 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~s  139 (264)
                      .||+|+||.||++.. .+++.+|+|++....   ......+.+|++++++++||||+++++++...+..++||||+++++
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~   81 (323)
T cd05571           2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE   81 (323)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence            469999999999995 568899999997532   2234567789999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----CCccccc
Q 024659          140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYSTN  215 (264)
Q Consensus       140 L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----~~~~~~~  215 (264)
                      |.+++.  ....+++..+..++.||+.||.|||+. |++||||||+||+++.++.+||+|||+++....    .....++
T Consensus        82 L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~-~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt  158 (323)
T cd05571          82 LFFHLS--RERVFSEDRARFYGAEIVSALGYLHSC-DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT  158 (323)
T ss_pred             HHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecC
Confidence            999886  345789999999999999999999999 999999999999999999999999999875322    2234688


Q ss_pred             ccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       216 ~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      +.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       159 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~  199 (323)
T cd05571         159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD  199 (323)
T ss_pred             ccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC
Confidence            99999999998889999999999999999999999997543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-40  Score=281.71  Aligned_cols=196  Identities=20%  Similarity=0.224  Sum_probs=173.6

Q ss_pred             cccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      .|++++.||+|+||.||++.+. +++.||+|++....   ......+.+|++++..++|+||+++++++...+..++|||
T Consensus         2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   81 (333)
T cd05600           2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME   81 (333)
T ss_pred             CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence            4778889999999999999964 58899999997542   2234567889999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC-CCcc
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-GRSY  212 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~-~~~~  212 (264)
                      |+++++|.+++.  ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++..... ....
T Consensus        82 ~~~g~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~  158 (333)
T cd05600          82 YVPGGDFRTLLN--NLGVLSEDHARFYMAEMFEAVDALHEL-GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSV  158 (333)
T ss_pred             CCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCc
Confidence            999999999986  345688999999999999999999999 999999999999999999999999999876543 3345


Q ss_pred             cccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       213 ~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .+++.|+|||++.+..++.++|||||||++|||++|..||....
T Consensus       159 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~  202 (333)
T cd05600         159 VGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGST  202 (333)
T ss_pred             ccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCC
Confidence            68899999999998899999999999999999999999997543

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.7e-41  Score=274.81  Aligned_cols=192  Identities=24%  Similarity=0.297  Sum_probs=162.6

Q ss_pred             cccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCC-----cceEEEe
Q 024659           60 NIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ERLLVAE  133 (264)
Q Consensus        60 ~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e  133 (264)
                      .-.+.+|.|+||.||+|. ...++.||+|++-....    .-.+|+++|+.++||||+++.-+|....     ...+|||
T Consensus        27 ~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVle  102 (364)
T KOG0658|consen   27 EAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLE  102 (364)
T ss_pred             EeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHH
Confidence            344556999999999999 45578999999875442    2347999999999999999999886532     3468999


Q ss_pred             cCCCCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC-CCeEEcccCCCcccCCC-
Q 024659          134 YMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~-~~~kl~dfg~~~~~~~~-  209 (264)
                      |++. +|.+++++-  .++.++.-.++-+..||++||.|||+. ||+||||||.|+|+|.+ |.+||+|||.|+....+ 
T Consensus       103 ymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~-~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e  180 (364)
T KOG0658|consen  103 YMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH-GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE  180 (364)
T ss_pred             hchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc-CcccCCCChheEEEcCCCCeEEeccCCcceeeccCC
Confidence            9976 799999742  356778778889999999999999998 99999999999999966 99999999999976543 


Q ss_pred             --CcccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          210 --RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                        ..+..|..|+|||.+.+.. |+.+.||||.||++.||+-|+++|++++.
T Consensus       181 pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~  231 (364)
T KOG0658|consen  181 PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSS  231 (364)
T ss_pred             CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCH
Confidence              4567789999999999876 99999999999999999999999997654

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=3.1e-40  Score=283.65  Aligned_cols=198  Identities=18%  Similarity=0.181  Sum_probs=171.3

Q ss_pred             CCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCC---CChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      ....|++++.||+|+||.||++.. .+++.+|+|.+...   .......+.+|+.+++.++||||+++++++.++...++
T Consensus        41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l  120 (370)
T cd05621          41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM  120 (370)
T ss_pred             CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence            346688899999999999999995 45889999998642   11233457789999999999999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-  209 (264)
                      ||||+++++|.+++..   ..+++..+..++.||+.||.|||++ +++||||||+||++++++.+||+|||++...... 
T Consensus       121 v~Ey~~gg~L~~~l~~---~~~~~~~~~~~~~qil~aL~~LH~~-~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~  196 (370)
T cd05621         121 VMEYMPGGDLVNLMSN---YDVPEKWAKFYTAEVVLALDAIHSM-GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG  196 (370)
T ss_pred             EEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEECCCCCEEEEecccceecccCC
Confidence            9999999999999853   3588899999999999999999999 9999999999999999999999999998765332 


Q ss_pred             ----CcccccccccccccccCCC----CCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 ----RSYSTNLAFTPPEYLRTGR----VTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ----~~~~~~~~y~aPE~~~~~~----~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                          ....+|+.|+|||++.+..    ++.++|+|||||++|||++|+.||....
T Consensus       197 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~  251 (370)
T cd05621         197 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS  251 (370)
T ss_pred             ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC
Confidence                2346899999999997543    7889999999999999999999997654

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-41  Score=286.87  Aligned_cols=198  Identities=21%  Similarity=0.358  Sum_probs=173.0

Q ss_pred             CCCccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      ..|+...-++=||.|+.|.||+|++.+. .||||+++.-.       ..++.-|++|+|+||+.+.|+|....-+|||||
T Consensus       121 iPFe~IsELeWlGSGaQGAVF~Grl~ne-tVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiME  192 (904)
T KOG4721|consen  121 IPFEEISELEWLGSGAQGAVFLGRLHNE-TVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIME  192 (904)
T ss_pred             CCHHHhhhhhhhccCcccceeeeeccCc-eehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeee
Confidence            3455444555679999999999998664 89999986432       247888999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---C
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---R  210 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---~  210 (264)
                      ||..|-|+..|+  .++.++......|..+|+.|++|||.+ .|||||||.-||||..+..+||+|||.++.....   .
T Consensus       193 fCa~GqL~~VLk--a~~~itp~llv~Wsk~IA~GM~YLH~h-KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkM  269 (904)
T KOG4721|consen  193 FCAQGQLYEVLK--AGRPITPSLLVDWSKGIAGGMNYLHLH-KIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKM  269 (904)
T ss_pred             ccccccHHHHHh--ccCccCHHHHHHHHHHhhhhhHHHHHh-hHhhhccCCCceEeeccceEEeccccchHhhhhhhhhh
Confidence            999999999997  567899999999999999999999999 9999999999999999999999999998765443   3


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc-ccccee
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV-SSFLWL  262 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~-~~~~~~  262 (264)
                      .+.||..|||||++...+.++|+|||||||+||||+||..|+.+-. +-++|-
T Consensus       270 SFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwG  322 (904)
T KOG4721|consen  270 SFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWG  322 (904)
T ss_pred             hhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEe
Confidence            4689999999999999999999999999999999999999997544 347764

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=1.2e-40  Score=285.63  Aligned_cols=196  Identities=13%  Similarity=0.134  Sum_probs=171.2

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      +|++++.||+|+||.||++.. .+++.+|+|.+....   ......+.+|+.++..++|++|+++++.+.+.+..++|||
T Consensus         2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E   81 (360)
T cd05627           2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME   81 (360)
T ss_pred             CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence            467788899999999999995 568899999997432   2234567889999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----  209 (264)
                      |+++++|.+++.  ....+++..+..++.|++.||.|||++ |++||||||+||+++.++.++|+|||++......    
T Consensus        82 ~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~~L~~lH~~-givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~  158 (360)
T cd05627          82 FLPGGDMMTLLM--KKDTLSEEATQFYIAETVLAIDAIHQL-GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE  158 (360)
T ss_pred             CCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence            999999999986  345689999999999999999999999 9999999999999999999999999997643211    


Q ss_pred             -----------------------------------CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          210 -----------------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       210 -----------------------------------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                                                         ....+|+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~  238 (360)
T cd05627         159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS  238 (360)
T ss_pred             cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence                                               123578999999999988999999999999999999999999975


Q ss_pred             Cc
Q 024659          255 HV  256 (264)
Q Consensus       255 ~~  256 (264)
                      ..
T Consensus       239 ~~  240 (360)
T cd05627         239 ET  240 (360)
T ss_pred             CC
Confidence            54

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-41  Score=280.43  Aligned_cols=203  Identities=16%  Similarity=0.269  Sum_probs=181.2

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      |+.+..||+|.||.||+|.+ ..++.||+|++..+... +.+++.+|+.+|.+++++||.++|+.+..+..++++|||+.
T Consensus        15 ~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~   94 (467)
T KOG0201|consen   15 YTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCG   94 (467)
T ss_pred             cccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhc
Confidence            55667789999999999995 55889999999976533 46789999999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----CCcc
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSY  212 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----~~~~  212 (264)
                      +|++.+.++  .+..+.+..+..++++++.|+.|||.. +.+|||||+.||++..+|.+||.|||.+.....    ..++
T Consensus        95 gGsv~~lL~--~~~~~~E~~i~~ilre~l~~l~ylH~~-~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tf  171 (467)
T KOG0201|consen   95 GGSVLDLLK--SGNILDEFEIAVILREVLKGLDYLHSE-KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTF  171 (467)
T ss_pred             Ccchhhhhc--cCCCCccceeeeehHHHHHHhhhhhhc-ceecccccccceeEeccCcEEEEecceeeeeechhhccccc
Confidence            999999996  334457788888999999999999999 999999999999999999999999999876543    3567


Q ss_pred             cccccccccccccCCCCCCccceechHHHHHHHHhCCCCCC-CCccccceecC
Q 024659          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP-SHVSSFLWLVP  264 (264)
Q Consensus       213 ~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~-~~~~~~~~~~p  264 (264)
                      .||+.|||||++....|+.++||||||++.+||.+|.+|++ .++..+++++|
T Consensus       172 vGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIp  224 (467)
T KOG0201|consen  172 VGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIP  224 (467)
T ss_pred             cccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEecc
Confidence            89999999999998889999999999999999999999997 66777888876

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6e-40  Score=276.03  Aligned_cols=189  Identities=19%  Similarity=0.208  Sum_probs=166.2

Q ss_pred             CCCCCCCeEEEEEe-CCCCEEEEEEeCCC---CChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCCH
Q 024659           65 HGEKAPNVVYKGKL-ENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL  140 (264)
Q Consensus        65 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL  140 (264)
                      ||+|+||.||++.+ .+++.||+|.+...   .......+.+|+.++++++||||+++++++...+..++||||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            59999999999995 45889999998753   223345678899999999999999999999999999999999999999


Q ss_pred             HHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----CCcccccc
Q 024659          141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYSTNL  216 (264)
Q Consensus       141 ~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----~~~~~~~~  216 (264)
                      .+++.  ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||+++....    .....+++
T Consensus        81 ~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  157 (312)
T cd05585          81 FHHLQ--REGRFDLSRARFYTAELLCALENLHKF-NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTP  157 (312)
T ss_pred             HHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCc
Confidence            99986  345689999999999999999999999 999999999999999999999999999875322    22346789


Q ss_pred             cccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       217 ~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       158 ~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~  197 (312)
T cd05585         158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN  197 (312)
T ss_pred             ccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC
Confidence            9999999998889999999999999999999999997543

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-40  Score=275.21  Aligned_cols=197  Identities=17%  Similarity=0.196  Sum_probs=168.0

Q ss_pred             CccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCCh--------------hHHHHHHHHHHHhcCCCCCccccce
Q 024659           56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--------------DARQFLEEARAVGQLRNRRLANLLG  120 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--------------~~~~~~~e~~~l~~l~h~~i~~~~~  120 (264)
                      ...|+++++||.|.||.|-+|+ ..+++.||+|++++....              ..+...+|+.+|++++|+|||+++.
T Consensus        96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE  175 (576)
T KOG0585|consen   96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE  175 (576)
T ss_pred             hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence            4668899999999999999999 456899999999753221              1357889999999999999999999


Q ss_pred             eeEeC--CcceEEEecCCCCCHHHhhhcCCCCC-CCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEE
Q 024659          121 CCCEG--DERLLVAEYMPNDTLAKHLFHWETQP-MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL  197 (264)
Q Consensus       121 ~~~~~--~~~~lv~e~~~~~sL~~~l~~~~~~~-~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl  197 (264)
                      +..++  +.+|||+|||..|.+...-   ...+ +.+.+++.++++++.||.|||.+ ||+||||||+|+|++++|++||
T Consensus       176 vLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Q-giiHRDIKPsNLLl~~~g~VKI  251 (576)
T KOG0585|consen  176 VLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQ-GIIHRDIKPSNLLLSSDGTVKI  251 (576)
T ss_pred             eecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhc-CeeccccchhheEEcCCCcEEe
Confidence            98764  5699999999888765432   4455 89999999999999999999999 9999999999999999999999


Q ss_pred             cccCCCcccCCC---------CcccccccccccccccCCC----CCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          198 SCFGLMKNSRDG---------RSYSTNLAFTPPEYLRTGR----VTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       198 ~dfg~~~~~~~~---------~~~~~~~~y~aPE~~~~~~----~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      +|||.+.....+         ....||+.|+|||.+.++.    -+.+.||||+||+||.|+.|+.||.++.
T Consensus       252 sDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~  323 (576)
T KOG0585|consen  252 SDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF  323 (576)
T ss_pred             eccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch
Confidence            999998755222         2357899999999998743    3568999999999999999999998764

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=8e-40  Score=277.06  Aligned_cols=189  Identities=19%  Similarity=0.241  Sum_probs=166.4

Q ss_pred             cCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCC
Q 024659           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT  139 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~s  139 (264)
                      .||+|+||.||++.. .+++.||+|.+....   ......+.+|+++++.++||||+++++++...+..++||||+++++
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~   81 (328)
T cd05593           2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE   81 (328)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence            469999999999995 568999999997542   2334567889999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----CCccccc
Q 024659          140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYSTN  215 (264)
Q Consensus       140 L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----~~~~~~~  215 (264)
                      |.+.+.  ....+++..+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||+++....    .....++
T Consensus        82 L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt  158 (328)
T cd05593          82 LFFHLS--RERVFSEDRTRFYGAEIVSALDYLHSG-KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGT  158 (328)
T ss_pred             HHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCC
Confidence            998885  345689999999999999999999999 999999999999999999999999999875322    1234578


Q ss_pred             ccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       216 ~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      +.|+|||++.+..++.++|||||||++|+|++|+.||...
T Consensus       159 ~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~  198 (328)
T cd05593         159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ  198 (328)
T ss_pred             cCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCC
Confidence            9999999999888999999999999999999999999654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=9.2e-41  Score=273.75  Aligned_cols=199  Identities=19%  Similarity=0.263  Sum_probs=179.9

Q ss_pred             ccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCCh---hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      -.|++.++||.|+||+|-++. ...|+.||+|.+++....   +.-.+++|++++..|.||||+.++.+|.+.+.+.|||
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM  132 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM  132 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence            357888999999999999999 577999999999876433   3446889999999999999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---  209 (264)
                      ||..+|.|++++.  ..+.+++..++.+++||..|+.|+|.+ +++|||||.+|||+|.++++||+|||++....+.   
T Consensus       133 EYaS~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCHkn-rVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfL  209 (668)
T KOG0611|consen  133 EYASGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCHKN-RVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFL  209 (668)
T ss_pred             EecCCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHhhc-cceecccchhheeecCCCCeeeeccchhhhhccccHH
Confidence            9999999999997  456799999999999999999999999 9999999999999999999999999998876554   


Q ss_pred             CcccccccccccccccCCCC-CCccceechHHHHHHHHhCCCCCCCCccc
Q 024659          210 RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHVSS  258 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~~~~-~~~~DiwslG~~l~el~~g~~~~~~~~~~  258 (264)
                      +.++|++.|.+||.+.+.+| .+.+|-||||++||.|+.|..||-+++-.
T Consensus       210 qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk  259 (668)
T KOG0611|consen  210 QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK  259 (668)
T ss_pred             HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH
Confidence            56789999999999999987 56899999999999999999999876543

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=6e-40  Score=277.30  Aligned_cols=190  Identities=18%  Similarity=0.227  Sum_probs=166.3

Q ss_pred             cCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCC
Q 024659           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT  139 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~s  139 (264)
                      .||+|+||.||++.. .++..||+|.+....   ......+.+|+++++.++||||+++++++...+..++||||+++++
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~   81 (323)
T cd05595           2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE   81 (323)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCc
Confidence            469999999999995 568899999997532   2234557789999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----CCccccc
Q 024659          140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYSTN  215 (264)
Q Consensus       140 L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----~~~~~~~  215 (264)
                      |..++.  ....+++..+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||++.....    .....++
T Consensus        82 L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt  158 (323)
T cd05595          82 LFFHLS--RERVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT  158 (323)
T ss_pred             HHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCC
Confidence            998886  345689999999999999999999999 999999999999999999999999999875322    1234678


Q ss_pred             ccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       216 ~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       159 ~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~  199 (323)
T cd05595         159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD  199 (323)
T ss_pred             cCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCC
Confidence            99999999998889999999999999999999999996543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=7.7e-41  Score=281.71  Aligned_cols=201  Identities=18%  Similarity=0.184  Sum_probs=182.1

Q ss_pred             ccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCCh--hHHHHHHHHHHHhcCCCCCccccceeeEeCCc-ceEEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDE-RLLVA  132 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-~~lv~  132 (264)
                      +.|..++.+|.|+||.++.++ ..+.+.+++|.+......  ..+...+|+.++.+++||||+.+.+.|..++. .+|+|
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            467888999999999999999 556789999999865433  34468899999999999999999999999888 99999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC--
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--  210 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~--  210 (264)
                      +|++||++.+.+.+.++..+++..+..|+.|++.|+.|||++ +|+|||||+.||++..++.++|+|||+++......  
T Consensus        84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~-~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~  162 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN-RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSL  162 (426)
T ss_pred             eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh-hhhcccchhhhhhccccCceeecchhhhhhcCCchhh
Confidence            999999999999876777899999999999999999999998 99999999999999999999999999999876654  


Q ss_pred             --cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCccc
Q 024659          211 --SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS  258 (264)
Q Consensus       211 --~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~~  258 (264)
                        ...||+.|++||.+.+.+|..++|||||||++|||++-+++|.+....
T Consensus       163 a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~  212 (426)
T KOG0589|consen  163 ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS  212 (426)
T ss_pred             hheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH
Confidence              457899999999999999999999999999999999999999876654

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=7.4e-40  Score=281.51  Aligned_cols=204  Identities=17%  Similarity=0.167  Sum_probs=173.6

Q ss_pred             HHHHhCCCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEe
Q 024659           49 LRTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCE  124 (264)
Q Consensus        49 ~~~~~~~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~  124 (264)
                      +.........|++++.||+|+||.||++.. .+++.+|+|.+....   ......+.+|+.+++.++||||+++++++..
T Consensus        35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~  114 (371)
T cd05622          35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  114 (371)
T ss_pred             HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence            333444456788999999999999999995 468899999986422   1223457789999999999999999999999


Q ss_pred             CCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCc
Q 024659          125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (264)
Q Consensus       125 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~  204 (264)
                      .+..++||||+++++|.+++..   ..++...+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||++.
T Consensus       115 ~~~~~lv~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NIll~~~~~ikL~DfG~a~  190 (371)
T cd05622         115 DRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDKSGHLKLADFGTCM  190 (371)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC-CEEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence            9999999999999999999853   3588888999999999999999999 99999999999999999999999999987


Q ss_pred             ccCCC-----CcccccccccccccccCCC----CCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          205 NSRDG-----RSYSTNLAFTPPEYLRTGR----VTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       205 ~~~~~-----~~~~~~~~y~aPE~~~~~~----~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .....     ....+|+.|+|||++....    ++.++|||||||++|||++|+.||....
T Consensus       191 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~  251 (371)
T cd05622         191 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS  251 (371)
T ss_pred             EcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCC
Confidence            65432     2346889999999987543    7889999999999999999999997654

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-40  Score=269.50  Aligned_cols=194  Identities=22%  Similarity=0.309  Sum_probs=169.4

Q ss_pred             ccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCC--CCChhHHHHHHHHHHHhcCCCCCccccceeeEe-----CCcceE
Q 024659           59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNR--SAWPDARQFLEEARAVGQLRNRRLANLLGCCCE-----GDERLL  130 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~l  130 (264)
                      |..++.||.|+||.|.++. ..+|+.||+|++..  .....+++..+|+.+|+.++|+||+.+++++..     -+..|+
T Consensus        24 y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYi  103 (359)
T KOG0660|consen   24 YVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYL  103 (359)
T ss_pred             ecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEE
Confidence            3447888999999999999 56689999999983  455567889999999999999999999999865     246899


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC--
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--  208 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~--  208 (264)
                      |+|+++. +|.+.++  .++.++...+..++.|+++||+|+|+. +++||||||+|++++.+..+||+|||+|+....  
T Consensus       104 V~elMet-DL~~iik--~~~~L~d~H~q~f~YQiLrgLKyiHSA-nViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~  179 (359)
T KOG0660|consen  104 VFELMET-DLHQIIK--SQQDLTDDHAQYFLYQILRGLKYIHSA-NVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFF  179 (359)
T ss_pred             ehhHHhh-HHHHHHH--cCccccHHHHHHHHHHHHHhcchhhcc-cccccccchhheeeccCCCEEeccccceeeccccC
Confidence            9999955 6999996  455699999999999999999999999 999999999999999999999999999997642  


Q ss_pred             ----CCcccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 ----GRSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 ----~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                          -..+..|.+|+|||.+.. ..|+...||||+||++.||++|+++|++..
T Consensus       180 ~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d  232 (359)
T KOG0660|consen  180 EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKD  232 (359)
T ss_pred             cccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCc
Confidence                134577999999998864 459999999999999999999999998654

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=6.2e-40  Score=281.94  Aligned_cols=200  Identities=17%  Similarity=0.166  Sum_probs=171.9

Q ss_pred             hCCCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcc
Q 024659           53 TSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (264)
Q Consensus        53 ~~~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  128 (264)
                      ......|++++.||+|+||.||++.. .+++.+|+|.+....   ......+.+|+.+++.++||||+++++++.+.+..
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~  118 (370)
T cd05596          39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL  118 (370)
T ss_pred             CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            33456788999999999999999995 468899999996431   22334577899999999999999999999999999


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      ++||||+++++|.+++..   ..++...+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus       119 ~lv~Ey~~gg~L~~~l~~---~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~  194 (370)
T cd05596         119 YMVMEYMPGGDLVNLMSN---YDIPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA  194 (370)
T ss_pred             EEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence            999999999999998853   3578888999999999999999999 999999999999999999999999999876433


Q ss_pred             C-----CcccccccccccccccCC----CCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 G-----RSYSTNLAFTPPEYLRTG----RVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 ~-----~~~~~~~~y~aPE~~~~~----~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .     ....+++.|+|||++.+.    .++.++|||||||++|||++|+.||....
T Consensus       195 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~  251 (370)
T cd05596         195 NGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS  251 (370)
T ss_pred             CCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC
Confidence            2     234678999999998653    37889999999999999999999997654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.6e-40  Score=280.85  Aligned_cols=196  Identities=20%  Similarity=0.203  Sum_probs=173.5

Q ss_pred             cccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      .|.+++.||+|+||.||++... +++.||+|++....   ......+.+|++++..++|+||+++++++.+.+..++|||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (350)
T cd05573           2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME   81 (350)
T ss_pred             CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence            4778889999999999999954 68899999997532   1334568889999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC---
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~---  210 (264)
                      |+++++|.+++..  ...+++..+..++.||+.||.|||+. |++||||||+||+++.++.++|+|||++.......   
T Consensus        82 ~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~-giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~  158 (350)
T cd05573          82 YMPGGDLMNLLIR--KDVFPEETARFYIAELVLALDSVHKL-GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE  158 (350)
T ss_pred             CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence            9999999999864  35789999999999999999999999 99999999999999999999999999987544322   


Q ss_pred             ------------------------------cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 ------------------------------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 ------------------------------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                                                    ...+++.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~  234 (350)
T cd05573         159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT  234 (350)
T ss_pred             ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence                                          3357899999999999999999999999999999999999997654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-39  Score=275.55  Aligned_cols=196  Identities=19%  Similarity=0.183  Sum_probs=169.4

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCC---CChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      +|++++.||+|+||.||++.. .+++.||+|.+.+.   .....+.+.+|+.++..++|+||+++++++.+.+..++|||
T Consensus         2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (331)
T cd05597           2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD   81 (331)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence            577888999999999999995 56889999999742   22234557889999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC---
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~---  210 (264)
                      |+++++|.+++.. ....+++..+..++.||+.||.|||++ +++||||||+||+++.++.++|+|||++.......   
T Consensus        82 ~~~g~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~  159 (331)
T cd05597          82 YYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVLAIDSVHQL-GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQ  159 (331)
T ss_pred             cCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcc
Confidence            9999999999864 345688999999999999999999999 99999999999999999999999999986543322   


Q ss_pred             --cccccccccccccccC-----CCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          211 --SYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       211 --~~~~~~~y~aPE~~~~-----~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                        ...+++.|+|||++..     ..++.++|||||||++|+|++|+.||...
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~  211 (331)
T cd05597         160 SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE  211 (331)
T ss_pred             ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC
Confidence              2357899999999863     34788999999999999999999999754

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=2.4e-39  Score=273.61  Aligned_cols=191  Identities=20%  Similarity=0.267  Sum_probs=165.4

Q ss_pred             ccCCCCCCCeEEEEEe----CCCCEEEEEEeCCCC----ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           63 SEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        63 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      +.||+|+||.||+++.    ..++.||+|.+....    ......+.+|+++++.++||||+++++++...+..++||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            5689999999999985    357899999987532    12234577899999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----C
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R  210 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~  210 (264)
                      +++++|.+++.  ....+.+..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||+++.....    .
T Consensus        82 ~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  158 (323)
T cd05584          82 LSGGELFMHLE--REGIFMEDTACFYLSEISLALEHLHQQ-GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTH  158 (323)
T ss_pred             CCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccc
Confidence            99999999886  344678888999999999999999999 9999999999999999999999999998743221    2


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ...+++.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~  204 (323)
T cd05584         159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN  204 (323)
T ss_pred             ccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC
Confidence            3457899999999998889999999999999999999999997543

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=1.7e-39  Score=275.44  Aligned_cols=196  Identities=18%  Similarity=0.165  Sum_probs=169.5

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      .|++++.||+|+||.||+++. .+++.+|+|.+....   ......+.+|..++..++|++|+++++++...+..++|||
T Consensus         2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~E   81 (331)
T cd05624           2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMD   81 (331)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence            577888999999999999995 467899999987521   2223457789999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC---
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~---  210 (264)
                      |+++++|.+++.. ....+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++.......   
T Consensus        82 y~~gg~L~~~l~~-~~~~l~~~~~~~~~~qi~~~L~~lH~~-~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~  159 (331)
T cd05624          82 YYVGGDLLTLLSK-FEDRLPEDMARFYIAEMVLAIHSIHQL-HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQ  159 (331)
T ss_pred             CCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCchHHEEEcCCCCEEEEeccceeeccCCCcee
Confidence            9999999999964 235688999999999999999999999 99999999999999999999999999987544322   


Q ss_pred             --cccccccccccccccC-----CCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          211 --SYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       211 --~~~~~~~y~aPE~~~~-----~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                        ...+++.|+|||++.+     +.++.++||||||+++|||++|+.||...
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~  211 (331)
T cd05624         160 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE  211 (331)
T ss_pred             eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCC
Confidence              2357899999999875     45788999999999999999999999754

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=3.9e-39  Score=273.25  Aligned_cols=197  Identities=19%  Similarity=0.238  Sum_probs=173.2

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      +.|++++.||+|+||.||++.+ .++..+|+|.+..... .....+.+|++++++++|+||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   84 (331)
T cd06649           5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH   84 (331)
T ss_pred             ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence            5678889999999999999995 4688999999986532 2345688999999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--Ccc
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSY  212 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--~~~  212 (264)
                      +++++|.+++..  ...+++..+..++.|++.||.|||++.+++|+||||+||+++.++.++|+|||++......  ...
T Consensus        85 ~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  162 (331)
T cd06649          85 MDGGSLDQVLKE--AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF  162 (331)
T ss_pred             CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccC
Confidence            999999999863  4468899999999999999999998636999999999999999999999999998754332  334


Q ss_pred             cccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       213 ~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      .++..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus       163 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~  205 (331)
T cd06649         163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPP  205 (331)
T ss_pred             CCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence            6789999999999888999999999999999999999999643

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=2.3e-39  Score=273.87  Aligned_cols=195  Identities=21%  Similarity=0.254  Sum_probs=167.9

Q ss_pred             ccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCC-CCccccceeeEeCCcceEEEe
Q 024659           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRN-RRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      |++++.||+|+||.||+|... +++.||+|++....   ....+.+..|.+++..+.| ++|+++++++...+..++|||
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (324)
T cd05587           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME   81 (324)
T ss_pred             ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEc
Confidence            678888999999999999954 57899999997532   2334567789999999976 468889999988889999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----C
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----G  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----~  209 (264)
                      |+++++|.+++.  ....+++..+..++.||+.||.|||++ +++||||||+||+++.++.++|+|||++.....    .
T Consensus        82 ~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~  158 (324)
T cd05587          82 YVNGGDLMYHIQ--QVGKFKEPHAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTT  158 (324)
T ss_pred             CCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCce
Confidence            999999999886  344688999999999999999999999 999999999999999999999999999864321    2


Q ss_pred             CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ....++..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~  205 (324)
T cd05587         159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED  205 (324)
T ss_pred             eeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC
Confidence            23457899999999998889999999999999999999999997544

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=2e-39  Score=269.87  Aligned_cols=198  Identities=18%  Similarity=0.273  Sum_probs=169.5

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      .+.|.+++.||.|+||.||++.. .++..||+|.+..... .....+.+|++++++++|+||+++++++...+..++|+|
T Consensus         4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (288)
T cd07871           4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE   83 (288)
T ss_pred             cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence            45688899999999999999995 4688999999975432 223467789999999999999999999998888999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----  209 (264)
                      |+++ +|.+++.. ....+++..+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||++......    
T Consensus        84 ~~~~-~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~  160 (288)
T cd07871          84 YLDS-DLKQYLDN-CGNLMSMHNVKIFMFQLLRGLSYCHKR-KILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTY  160 (288)
T ss_pred             CCCc-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccc
Confidence            9975 89988854 344678899999999999999999999 9999999999999999999999999998754322    


Q ss_pred             CcccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ....++..|+|||++.+ ..++.++|||||||++|+|++|++||....
T Consensus       161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~  208 (288)
T cd07871         161 SNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGST  208 (288)
T ss_pred             cCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            23456889999999876 458999999999999999999999997543

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=2.7e-39  Score=274.97  Aligned_cols=197  Identities=21%  Similarity=0.336  Sum_probs=165.1

Q ss_pred             cccccccCCCCCCCeEEEEEe------CCCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcC-CCCCccccceeeEeCC-cc
Q 024659           58 MENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGD-ER  128 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~-~~  128 (264)
                      .|++.+.||.|+||.||+|.+      ..+..||+|.+..... .....+.+|+.++.++ +||||+++++++...+ ..
T Consensus         8 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~   87 (338)
T cd05102           8 RLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPL   87 (338)
T ss_pred             HceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCce
Confidence            477888899999999999974      2356899999975432 2345688999999999 8999999999887644 57


Q ss_pred             eEEEecCCCCCHHHhhhcCC------------------------------------------------------------
Q 024659          129 LLVAEYMPNDTLAKHLFHWE------------------------------------------------------------  148 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~------------------------------------------------------------  148 (264)
                      +++|||+++|+|.+++....                                                            
T Consensus        88 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (338)
T cd05102          88 MVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLW  167 (338)
T ss_pred             EEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccc
Confidence            89999999999999886421                                                            


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC------cccccccccccc
Q 024659          149 TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPE  222 (264)
Q Consensus       149 ~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE  222 (264)
                      ...+++..+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||+++......      ...++..|+|||
T Consensus       168 ~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE  246 (338)
T cd05102         168 KSPLTMEDLICYSFQVARGMEFLASR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPE  246 (338)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHC-CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcH
Confidence            12477888899999999999999999 99999999999999999999999999987643221      223457899999


Q ss_pred             cccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          223 YLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       223 ~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      ++.+..++.++||||||+++|||++ |..||...
T Consensus       247 ~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~  280 (338)
T cd05102         247 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGV  280 (338)
T ss_pred             HhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCC
Confidence            9998889999999999999999997 88888754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=1.7e-39  Score=274.77  Aligned_cols=190  Identities=20%  Similarity=0.230  Sum_probs=165.8

Q ss_pred             cCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCC
Q 024659           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT  139 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~s  139 (264)
                      .||+|+||.||++.. .+++.||+|.+....   ......+.+|+++++.++|+||+++.+++...+..++||||+++++
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~   81 (325)
T cd05594           2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE   81 (325)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence            469999999999994 568899999997532   2234567789999999999999999999999999999999999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----CCcccc
Q 024659          140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST  214 (264)
Q Consensus       140 L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~-~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----~~~~~~  214 (264)
                      |..++.  ....+++..+..++.||+.||.|||+ . +++||||||+||+++.++.+||+|||+++....    .....+
T Consensus        82 L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~-~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g  158 (325)
T cd05594          82 LFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCG  158 (325)
T ss_pred             HHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhcC-CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccC
Confidence            998885  34578999999999999999999997 7 999999999999999999999999999875322    123468


Q ss_pred             cccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       215 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      +..|+|||++.+..++.++|||||||++|+|++|+.||....
T Consensus       159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~  200 (325)
T cd05594         159 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD  200 (325)
T ss_pred             CcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCC
Confidence            899999999998889999999999999999999999996543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=3.1e-39  Score=273.07  Aligned_cols=194  Identities=20%  Similarity=0.296  Sum_probs=165.8

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHH---HhcCCCCCccccceeeEeCCcceEE
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARA---VGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~---l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      |++++.||+|+||.||++.+ .+++.||+|.++...   ....+.+.+|.++   ++.++||||+++++++...+..++|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            45778899999999999995 568899999997532   1223456666554   4567899999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC---
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---  208 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~---  208 (264)
                      |||+++++|...+.   ...+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++.....   
T Consensus        81 ~E~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~  156 (324)
T cd05589          81 MEYAAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHEN-KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD  156 (324)
T ss_pred             EcCCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC
Confidence            99999999998874   34689999999999999999999999 999999999999999999999999999874322   


Q ss_pred             -CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 -GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 -~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                       .....+++.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~  205 (324)
T cd05589         157 RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDD  205 (324)
T ss_pred             cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCC
Confidence             223467899999999998889999999999999999999999997543

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=3.6e-39  Score=272.54  Aligned_cols=195  Identities=19%  Similarity=0.248  Sum_probs=167.6

Q ss_pred             ccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEEEe
Q 024659           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      |++++.||+|+||.||++... +++.+|+|.+....   ....+.+..|..++..+ +|++|+++++++...+..++|||
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (323)
T cd05616           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVME   81 (323)
T ss_pred             ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEc
Confidence            567888999999999999954 57899999987542   12234466777888777 58899999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----C
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----G  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----~  209 (264)
                      |+++++|.+.+.  ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++....    .
T Consensus        82 ~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~  158 (323)
T cd05616          82 YVNGGDLMYQIQ--QVGRFKEPHAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTT  158 (323)
T ss_pred             CCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCcc
Confidence            999999999886  335688999999999999999999999 999999999999999999999999999875321    2


Q ss_pred             CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ....+++.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~  205 (323)
T cd05616         159 KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED  205 (323)
T ss_pred             ccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCC
Confidence            23467899999999999899999999999999999999999997554

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=5e-39  Score=267.12  Aligned_cols=195  Identities=19%  Similarity=0.273  Sum_probs=169.0

Q ss_pred             cccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      .|++++.||+|+||.||++++. +++.+|+|++....  ....+.+.+|+++++.++|+||+++++++...+..++||||
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (287)
T cd07848           2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY   81 (287)
T ss_pred             CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence            4678888999999999999964 58899999987543  22345678899999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-----
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----  209 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-----  209 (264)
                      ++++.+..+..  ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++......     
T Consensus        82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~  158 (287)
T cd07848          82 VEKNMLELLEE--MPNGVPPEKVRSYIYQLIKAIHWCHKN-DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANY  158 (287)
T ss_pred             CCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccc
Confidence            99876665443  345688999999999999999999999 9999999999999999999999999998765332     


Q ss_pred             CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ....++..|+|||++.+..++.++|+|||||++|||++|++||...
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~  204 (287)
T cd07848         159 TEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGE  204 (287)
T ss_pred             cccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCC
Confidence            2245788999999999888999999999999999999999999754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=5.8e-39  Score=271.09  Aligned_cols=190  Identities=18%  Similarity=0.259  Sum_probs=164.6

Q ss_pred             cCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEEEecCCCC
Q 024659           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND  138 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~  138 (264)
                      .||+|+||.||++.. .+++.||+|++....   ....+.+..|.+++..+ +||||+++++++...+..++||||++++
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   81 (321)
T cd05591           2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG   81 (321)
T ss_pred             ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence            479999999999995 457899999997532   22344567788888866 7999999999999999999999999999


Q ss_pred             CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----CCcccc
Q 024659          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST  214 (264)
Q Consensus       139 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----~~~~~~  214 (264)
                      +|...+.  ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.++|+|||++.....    .....+
T Consensus        82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g  158 (321)
T cd05591          82 DLMFQIQ--RSRKFDEPRSRFYAAEVTLALMFLHRH-GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCG  158 (321)
T ss_pred             cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCCCEEEeecccceecccCCcccccccc
Confidence            9998886  345688999999999999999999999 999999999999999999999999999875322    223457


Q ss_pred             cccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       215 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      +..|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus       159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~  200 (321)
T cd05591         159 TPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN  200 (321)
T ss_pred             CccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC
Confidence            899999999998889999999999999999999999997554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=5.2e-39  Score=272.56  Aligned_cols=197  Identities=19%  Similarity=0.184  Sum_probs=168.7

Q ss_pred             cccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      +|++++.||+|+||.||++... .++.+|+|.+.+..   ......+.+|+.++..++|++|+++++.+.+.+..++|||
T Consensus         2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (332)
T cd05623           2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD   81 (332)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence            4678889999999999999954 57889999986421   1223447789999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----  209 (264)
                      |+++++|.+++.. ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++......    
T Consensus        82 y~~~g~L~~~l~~-~~~~l~~~~~~~~~~qi~~al~~lH~~-~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~  159 (332)
T cd05623          82 YYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVIAIDSVHQL-HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ  159 (332)
T ss_pred             ccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEECCCCCEEEeecchheecccCCcce
Confidence            9999999999964 245688999999999999999999999 9999999999999999999999999998654222    


Q ss_pred             -Cccccccccccccccc-----CCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 -RSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 -~~~~~~~~y~aPE~~~-----~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                       ....+++.|+|||++.     ...++.++|||||||++|||++|+.||....
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~  212 (332)
T cd05623         160 SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES  212 (332)
T ss_pred             ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC
Confidence             1246789999999986     3458899999999999999999999997543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-41  Score=266.34  Aligned_cols=202  Identities=17%  Similarity=0.282  Sum_probs=182.2

Q ss_pred             ccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCC
Q 024659           59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN  137 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  137 (264)
                      +.++++||+|+||.||++. .+.|..+|+|.++...  +.+++.+|+.++++++.++++++||.+.....+|||||||..
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA  112 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA  112 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence            4577889999999999999 5679999999998765  678899999999999999999999999999999999999999


Q ss_pred             CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----Cccc
Q 024659          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYS  213 (264)
Q Consensus       138 ~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~~~~  213 (264)
                      |++.+.++. .++++.+..+..+++..++||+|||.. .-+|||||+.|||++.+|.+||.|||.+....+.    ....
T Consensus       113 GSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~-~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVI  190 (502)
T KOG0574|consen  113 GSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDL-KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVI  190 (502)
T ss_pred             CcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHH-HHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccc
Confidence            999999965 677899999999999999999999999 9999999999999999999999999999876543    4567


Q ss_pred             ccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCC-CccccceecC
Q 024659          214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS-HVSSFLWLVP  264 (264)
Q Consensus       214 ~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~-~~~~~~~~~p  264 (264)
                      ||+-|||||++..-.|+.++||||||++..||.-|++|++. +...-++-+|
T Consensus       191 GTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIP  242 (502)
T KOG0574|consen  191 GTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIP  242 (502)
T ss_pred             cCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEecc
Confidence            89999999999999999999999999999999999999874 4444555444

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=5.6e-39  Score=269.01  Aligned_cols=196  Identities=19%  Similarity=0.243  Sum_probs=167.7

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      +.|+++++||.|+||.||++... +++.||+|.+...... ....+.+|+++++.++|+||+++++++......++||||
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY   84 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence            45788899999999999999954 6889999999754322 234577899999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----C
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R  210 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~  210 (264)
                      +. ++|.+++.. ....++...+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++......    .
T Consensus        85 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~  161 (303)
T cd07869          85 VH-TDLCQYMDK-HPGGLHPENVKLFLFQLLRGLSYIHQR-YILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYS  161 (303)
T ss_pred             CC-cCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCC
Confidence            96 578887754 345688899999999999999999999 9999999999999999999999999998653321    2


Q ss_pred             cccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ...++..|+|||++.+. .++.++|||||||++|+|++|..||...
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~  207 (303)
T cd07869         162 NEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGM  207 (303)
T ss_pred             CCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            34568899999998754 4888999999999999999999999753

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=6.4e-39  Score=271.67  Aligned_cols=187  Identities=17%  Similarity=0.244  Sum_probs=164.3

Q ss_pred             cCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEEEecCCCC
Q 024659           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND  138 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~  138 (264)
                      .||+|+||.||++.+ .+++.||+|.++...   ......+..|..++.++ +||||+++++++...+..++||||++++
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g   81 (329)
T cd05588           2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGG   81 (329)
T ss_pred             eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            469999999999995 568899999998542   22345577899999888 6999999999999999999999999999


Q ss_pred             CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----CCcccc
Q 024659          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST  214 (264)
Q Consensus       139 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----~~~~~~  214 (264)
                      +|.+++.  ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||+++....    .....+
T Consensus        82 ~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g  158 (329)
T cd05588          82 DLMFHMQ--RQRKLPEEHARFYSAEISLALNFLHER-GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCG  158 (329)
T ss_pred             CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccC
Confidence            9998885  345799999999999999999999999 999999999999999999999999999874221    223467


Q ss_pred             cccccccccccCCCCCCccceechHHHHHHHHhCCCCCC
Q 024659          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       215 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                      +..|+|||++.+..++.++|+|||||++|+|++|+.||.
T Consensus       159 t~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~  197 (329)
T cd05588         159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD  197 (329)
T ss_pred             CccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcc
Confidence            899999999998889999999999999999999999995

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=7.6e-39  Score=271.20  Aligned_cols=187  Identities=18%  Similarity=0.261  Sum_probs=163.6

Q ss_pred             cCCCCCCCeEEEEEe-CCCCEEEEEEeCCC---CChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEEEecCCCC
Q 024659           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRS---AWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND  138 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~  138 (264)
                      .||+|+||.||++.. .+++.+|+|.+...   .......+.+|+.++.++ +||||+++++++...+..++||||++++
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~   81 (329)
T cd05618           2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG   81 (329)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCC
Confidence            469999999999995 56789999999864   223345577888888776 7999999999999999999999999999


Q ss_pred             CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----CCcccc
Q 024659          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST  214 (264)
Q Consensus       139 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----~~~~~~  214 (264)
                      +|..++.  ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||+++....    .....+
T Consensus        82 ~L~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~g  158 (329)
T cd05618          82 DLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG  158 (329)
T ss_pred             CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccC
Confidence            9998875  345789999999999999999999999 999999999999999999999999999875322    223467


Q ss_pred             cccccccccccCCCCCCccceechHHHHHHHHhCCCCCC
Q 024659          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       215 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                      +..|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus       159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~  197 (329)
T cd05618         159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD  197 (329)
T ss_pred             CccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCc
Confidence            899999999998889999999999999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=4.1e-40  Score=291.38  Aligned_cols=197  Identities=27%  Similarity=0.369  Sum_probs=172.0

Q ss_pred             cccccccCCCCCCCeEEEEEeCC------CCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           58 MENIVSEHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      +...+.+||+|+||+||+|...+      ...||||.++..... ...+|++|++++..++|||||+++|+|..++..++
T Consensus       487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~M  566 (774)
T KOG1026|consen  487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCM  566 (774)
T ss_pred             heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEE
Confidence            35677889999999999998543      568999999987766 46689999999999999999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcC--------CCCC----CCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEc
Q 024659          131 VAEYMPNDTLAKHLFHW--------ETQP----MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLS  198 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~--------~~~~----~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~  198 (264)
                      |+||+..|+|.+||+..        .+..    ++..+.+.|+.||+.|+.||-++ .+|||||-++|+||.++..+||+
T Consensus       567 vFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~-~FVHRDLATRNCLVge~l~VKIs  645 (774)
T KOG1026|consen  567 VFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH-HFVHRDLATRNCLVGENLVVKIS  645 (774)
T ss_pred             EEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-cccccchhhhhceeccceEEEec
Confidence            99999999999999742        1223    77889999999999999999999 99999999999999999999999


Q ss_pred             ccCCCcccCCCCcc------cccccccccccccCCCCCCccceechHHHHHHHHhCCC-CCCCC
Q 024659          199 CFGLMKNSRDGRSY------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKH-IPPSH  255 (264)
Q Consensus       199 dfg~~~~~~~~~~~------~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~-~~~~~  255 (264)
                      |||+++.....+-+      .-..+|||||.+..++||.++|||||||+|||+++... |...-
T Consensus       646 DfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~gl  709 (774)
T KOG1026|consen  646 DFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGL  709 (774)
T ss_pred             ccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCccccc
Confidence            99999976655433      23589999999999999999999999999999998654 44433

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.1e-39  Score=265.53  Aligned_cols=197  Identities=19%  Similarity=0.231  Sum_probs=171.2

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh---hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      |++++.||+|+||.||++.. .+++.||+|.+......   ....+.+|+.+++.++|+||+++++.+..++..++||||
T Consensus         2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05605           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence            56777889999999999995 46889999999753221   223467899999999999999999999988999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC---c
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---S  211 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~---~  211 (264)
                      +++++|.+++.......+++..+..++.|++.||.|||++ +++|+||+|+||++++++.++|+|||++.......   .
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  160 (285)
T cd05605          82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE-RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRG  160 (285)
T ss_pred             cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcccc
Confidence            9999999888654445789999999999999999999999 99999999999999999999999999987654332   2


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ..++..|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~  205 (285)
T cd05605         161 RVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRK  205 (285)
T ss_pred             ccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCc
Confidence            357889999999998889999999999999999999999997643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=8.5e-39  Score=269.48  Aligned_cols=190  Identities=20%  Similarity=0.281  Sum_probs=162.4

Q ss_pred             cCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhc-CCCCCccccceeeEeCCcceEEEecCCCC
Q 024659           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQ-LRNRRLANLLGCCCEGDERLLVAEYMPND  138 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  138 (264)
                      .||+|+||.||++.. .+++.||+|.++...   ....+.+..|..++.. .+||||+++++++...+..++||||++++
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg   81 (316)
T cd05592           2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG   81 (316)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence            579999999999995 457899999997532   1223445566666665 48999999999999999999999999999


Q ss_pred             CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----CCcccc
Q 024659          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST  214 (264)
Q Consensus       139 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----~~~~~~  214 (264)
                      +|.+++..  ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.....    .....+
T Consensus        82 ~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~-~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~g  158 (316)
T cd05592          82 DLMFHIQS--SGRFDEARARFYAAEIICGLQFLHKK-GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCG  158 (316)
T ss_pred             cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccC
Confidence            99998863  44688999999999999999999999 999999999999999999999999999875322    223467


Q ss_pred             cccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       215 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      +..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~  200 (316)
T cd05592         159 TPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGED  200 (316)
T ss_pred             CccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCC
Confidence            899999999998889999999999999999999999997543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=7.2e-39  Score=271.71  Aligned_cols=193  Identities=19%  Similarity=0.224  Sum_probs=166.9

Q ss_pred             ccccccCCCCCCCeEEEEEe----CCCCEEEEEEeCCCC----ChhHHHHHHHHHHHhcCC-CCCccccceeeEeCCcce
Q 024659           59 ENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERL  129 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~  129 (264)
                      |++++.||+|+||.||++..    .+++.+|+|.+....    ....+.+.+|+.++..++ |++|+++++++...+..+
T Consensus         2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (332)
T cd05614           2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH   81 (332)
T ss_pred             ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence            67888899999999999885    357899999987432    223456788999999994 899999999999888999


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~  209 (264)
                      +||||+++++|.+++.  ....+++..+..++.||+.||.|||+. +++||||||+||+++.++.+||+|||+++.....
T Consensus        82 lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~  158 (332)
T cd05614          82 LILDYVSGGEMFTHLY--QRDNFSEDEVRFYSGEIILALEHLHKL-GIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE  158 (332)
T ss_pred             EEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCHHHeEECCCCCEEEeeCcCCcccccc
Confidence            9999999999999886  345689999999999999999999999 9999999999999999999999999998754322


Q ss_pred             -----CcccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCC
Q 024659          210 -----RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       210 -----~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                           ....++..|+|||++.+.. ++.++|||||||++|||++|+.||..
T Consensus       159 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~  209 (332)
T cd05614         159 EKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTL  209 (332)
T ss_pred             CCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCC
Confidence                 2346789999999998654 78899999999999999999999964

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=4.6e-39  Score=272.11  Aligned_cols=190  Identities=19%  Similarity=0.225  Sum_probs=162.9

Q ss_pred             cCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHH-HHhcCCCCCccccceeeEeCCcceEEEecCCCC
Q 024659           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEAR-AVGQLRNRRLANLLGCCCEGDERLLVAEYMPND  138 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  138 (264)
                      .||.|+||.||++.. .+++.+|+|++....   ......+..|.. +++.++||||+++++.+...+..++||||++++
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~   81 (325)
T cd05604           2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGG   81 (325)
T ss_pred             ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCC
Confidence            579999999999994 568899999997532   122334555554 567789999999999999999999999999999


Q ss_pred             CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----CCcccc
Q 024659          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST  214 (264)
Q Consensus       139 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----~~~~~~  214 (264)
                      +|...+.  ....+++..+..++.||+.||.|||++ |++||||||+||+++.++.+||+|||++.....    .....+
T Consensus        82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~-givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~g  158 (325)
T cd05604          82 ELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSI-NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCG  158 (325)
T ss_pred             CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccC
Confidence            9998885  445789999999999999999999999 999999999999999999999999999875322    223467


Q ss_pred             cccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       215 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      +..|+|||++.+..++.++|||||||++|||++|..||....
T Consensus       159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~  200 (325)
T cd05604         159 TPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD  200 (325)
T ss_pred             ChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC
Confidence            899999999999889999999999999999999999997654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=7.1e-39  Score=270.40  Aligned_cols=190  Identities=22%  Similarity=0.284  Sum_probs=164.7

Q ss_pred             cCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEEEecCCCC
Q 024659           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND  138 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~  138 (264)
                      .||+|+||.||++.. .+++.||+|.+....   ....+.+..|..++..+ +||||+++++++...+..++||||++++
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g   81 (320)
T cd05590           2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG   81 (320)
T ss_pred             eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence            469999999999995 468899999987532   22345567788888876 6999999999999999999999999999


Q ss_pred             CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----CCcccc
Q 024659          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST  214 (264)
Q Consensus       139 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----~~~~~~  214 (264)
                      +|.+++.  ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.++|+|||++.....    .....+
T Consensus        82 ~L~~~i~--~~~~l~~~~~~~~~~ql~~~L~~lH~~-~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~g  158 (320)
T cd05590          82 DLMFHIQ--KSRRFDEARARFYAAEITSALMFLHDK-GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCG  158 (320)
T ss_pred             hHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccccccc
Confidence            9999886  345689999999999999999999999 999999999999999999999999999875321    223467


Q ss_pred             cccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       215 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ++.|+|||++.+..++.++|||||||++|+|++|+.||....
T Consensus       159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~  200 (320)
T cd05590         159 TPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN  200 (320)
T ss_pred             CccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC
Confidence            899999999998889999999999999999999999997554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-39  Score=250.58  Aligned_cols=200  Identities=18%  Similarity=0.169  Sum_probs=175.6

Q ss_pred             CCCccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeC-----Cc
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG-----DE  127 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~  127 (264)
                      -|-++|.+.+++|+|+|+.||.+. ..++..+|+|++.....++.+..++|++..++++|||+++++++...+     ..
T Consensus        18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~   97 (302)
T KOG2345|consen   18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE   97 (302)
T ss_pred             EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence            345678999999999999999999 778889999999988878888999999999999999999999987543     34


Q ss_pred             ceEEEecCCCCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCC--ceeeccCCCCeeeCCCCCeEEcccCCC
Q 024659          128 RLLVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~~~--i~H~dl~~~Nil~~~~~~~kl~dfg~~  203 (264)
                      .||+++|+..|||.+.+...  ++..+++.+++.|+.++++||.+||+. .  +.||||||.||++.+.+.+++.|||.+
T Consensus        98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~  176 (302)
T KOG2345|consen   98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSA  176 (302)
T ss_pred             EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCc
Confidence            89999999999999998754  345789999999999999999999999 6  999999999999999999999999998


Q ss_pred             cccCCC-------------Cccccccccccccccc---CCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          204 KNSRDG-------------RSYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       204 ~~~~~~-------------~~~~~~~~y~aPE~~~---~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      +...-.             .....|..|+|||.+.   +...++++|||||||+||+|+.|..||..
T Consensus       177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~  243 (302)
T KOG2345|consen  177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFER  243 (302)
T ss_pred             cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchH
Confidence            764321             1235689999999884   44589999999999999999999999953

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=1.1e-38  Score=269.71  Aligned_cols=190  Identities=22%  Similarity=0.255  Sum_probs=162.4

Q ss_pred             cCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHH-HHhcCCCCCccccceeeEeCCcceEEEecCCCC
Q 024659           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEAR-AVGQLRNRRLANLLGCCCEGDERLLVAEYMPND  138 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  138 (264)
                      .||+|+||+||++.. .+++.||+|.+....   ......+..|.. +++.++||||+++++.+...+..++||||+.++
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g   81 (323)
T cd05575           2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGG   81 (323)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCC
Confidence            579999999999995 468899999997532   122334445544 567899999999999999999999999999999


Q ss_pred             CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----CCcccc
Q 024659          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST  214 (264)
Q Consensus       139 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----~~~~~~  214 (264)
                      +|..++.  ....+++..+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||++.....    .....+
T Consensus        82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (323)
T cd05575          82 ELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSL-NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCG  158 (323)
T ss_pred             CHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccC
Confidence            9999886  345788999999999999999999999 999999999999999999999999999875322    123457


Q ss_pred             cccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       215 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ++.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~  200 (323)
T cd05575         159 TPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD  200 (323)
T ss_pred             ChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC
Confidence            899999999998889999999999999999999999997643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=2.7e-39  Score=274.11  Aligned_cols=197  Identities=17%  Similarity=0.142  Sum_probs=170.5

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC---hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      .|++++.||+|+||.||++.. .+++.+|+|.++....   .....+.+|+.+++.++|+||+++++++...+..++|||
T Consensus         2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (330)
T cd05601           2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME   81 (330)
T ss_pred             CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence            467788899999999999995 5688999999985422   234457889999999999999999999999899999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC---
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~---  210 (264)
                      |+++++|.+++.. ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.......   
T Consensus        82 ~~~~~~L~~~l~~-~~~~l~~~~~~~~~~qi~~aL~~lH~~-~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~  159 (330)
T cd05601          82 YQPGGDLLSLLNR-YEDQFDEDMAQFYLAELVLAIHSVHQM-GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVN  159 (330)
T ss_pred             CCCCCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEcccCchHheEECCCCCEEeccCCCCeECCCCCcee
Confidence            9999999999964 335789999999999999999999999 99999999999999999999999999987654322   


Q ss_pred             --ccccccccccccccc------CCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 --SYSTNLAFTPPEYLR------TGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 --~~~~~~~y~aPE~~~------~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                        ...+++.|+|||++.      ...++.++|||||||++|||++|+.||....
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~  213 (330)
T cd05601         160 SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT  213 (330)
T ss_pred             eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC
Confidence              235789999999986      4457899999999999999999999997543

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=7.2e-39  Score=269.90  Aligned_cols=191  Identities=21%  Similarity=0.256  Sum_probs=164.1

Q ss_pred             cCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEEEecCCCC
Q 024659           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND  138 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~  138 (264)
                      .||+|+||.||++.+ .+++.||+|.+....   .........|..++... +|+||+++++++...+..++||||+.++
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g   81 (316)
T cd05620           2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGG   81 (316)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCC
Confidence            579999999999995 468899999997532   12334566777777754 8999999999999999999999999999


Q ss_pred             CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----CCcccc
Q 024659          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST  214 (264)
Q Consensus       139 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----~~~~~~  214 (264)
                      +|..++..  ...+++..+..++.|++.||.|||++ +++||||||+||+++.++.++|+|||+++....    .....+
T Consensus        82 ~L~~~i~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (316)
T cd05620          82 DLMFHIQD--KGRFDLYRATFYAAEIVCGLQFLHSK-GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCG  158 (316)
T ss_pred             cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCC
Confidence            99998863  45688999999999999999999999 999999999999999999999999999874321    233467


Q ss_pred             cccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       215 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                      +..|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus       159 t~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~  201 (316)
T cd05620         159 TPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE  201 (316)
T ss_pred             CcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH
Confidence            8999999999988999999999999999999999999975543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=1.2e-38  Score=269.25  Aligned_cols=190  Identities=21%  Similarity=0.236  Sum_probs=161.7

Q ss_pred             cCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC---hhHHHHHHHH-HHHhcCCCCCccccceeeEeCCcceEEEecCCCC
Q 024659           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEA-RAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND  138 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  138 (264)
                      .||+|+||.||++.. .+++.+|+|.+.....   .....+..|. .+++.++|+||+++++++.+.+..++||||++++
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~   81 (321)
T cd05603           2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG   81 (321)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence            579999999999995 5688999999875321   1223344454 4678899999999999999999999999999999


Q ss_pred             CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----CCcccc
Q 024659          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST  214 (264)
Q Consensus       139 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----~~~~~~  214 (264)
                      +|...+.  ....++...+..++.||+.||.|||+. +++||||||+||+++.++.+||+|||+++....    .....+
T Consensus        82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (321)
T cd05603          82 ELFFHLQ--RERCFLEPRARFYAAEVASAIGYLHSL-NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCG  158 (321)
T ss_pred             CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccC
Confidence            9998875  345688889999999999999999999 999999999999999999999999999875322    123457


Q ss_pred             cccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       215 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ++.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  200 (321)
T cd05603         159 TPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD  200 (321)
T ss_pred             CcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC
Confidence            899999999998889999999999999999999999997653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=1.3e-38  Score=269.31  Aligned_cols=190  Identities=21%  Similarity=0.241  Sum_probs=161.1

Q ss_pred             cCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC---hhHHHHHHHH-HHHhcCCCCCccccceeeEeCCcceEEEecCCCC
Q 024659           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEA-RAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND  138 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  138 (264)
                      .||+|+||.||++.+ .+++.+|+|++.....   .....+..|. .+++.++|+||+++++++...+..++||||++++
T Consensus         2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~   81 (325)
T cd05602           2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG   81 (325)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence            579999999999995 4578899999875321   1222334443 4567889999999999999999999999999999


Q ss_pred             CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----CCcccc
Q 024659          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST  214 (264)
Q Consensus       139 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----~~~~~~  214 (264)
                      +|.+++.  ....+....+..++.||+.||.|||++ |++||||||+||+++.++.++|+|||+++....    .....+
T Consensus        82 ~L~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~-giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~g  158 (325)
T cd05602          82 ELFYHLQ--RERCFLEPRARFYAAEIASALGYLHSL-NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCG  158 (325)
T ss_pred             cHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccC
Confidence            9999886  345678888999999999999999999 999999999999999999999999999875322    223467


Q ss_pred             cccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       215 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ++.|+|||++.+..++.++|||||||++|+|++|+.||....
T Consensus       159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  200 (325)
T cd05602         159 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN  200 (325)
T ss_pred             CccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC
Confidence            899999999998889999999999999999999999997543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=1.2e-38  Score=268.54  Aligned_cols=190  Identities=21%  Similarity=0.286  Sum_probs=163.4

Q ss_pred             cCCCCCCCeEEEEEeC-CCCEEEEEEeCCCC---ChhHHHHHHHHHHHhc-CCCCCccccceeeEeCCcceEEEecCCCC
Q 024659           64 EHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQ-LRNRRLANLLGCCCEGDERLLVAEYMPND  138 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  138 (264)
                      .||+|+||.||++.+. +++.||+|.+....   .........|..++.. ++||||+++++++.+.+..++||||++++
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g   81 (316)
T cd05619           2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGG   81 (316)
T ss_pred             eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence            5799999999999954 57899999997542   1233456667777776 48999999999999999999999999999


Q ss_pred             CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----CCcccc
Q 024659          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST  214 (264)
Q Consensus       139 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----~~~~~~  214 (264)
                      +|.+++..  ...+++.++..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++.....    .....+
T Consensus        82 ~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~LH~~-~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (316)
T cd05619          82 DLMFHIQS--CHKFDLPRATFYAAEIICGLQFLHSK-GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCG  158 (316)
T ss_pred             cHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecC
Confidence            99999863  35688999999999999999999999 999999999999999999999999999875322    223457


Q ss_pred             cccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       215 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      +..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~  200 (316)
T cd05619         159 TPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD  200 (316)
T ss_pred             CccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC
Confidence            899999999998889999999999999999999999997543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=1.4e-38  Score=269.46  Aligned_cols=188  Identities=20%  Similarity=0.267  Sum_probs=164.7

Q ss_pred             cCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEEEecCCCC
Q 024659           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND  138 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~  138 (264)
                      .||+|+||.||++.. .+++.+|+|++....   ....+.+.+|+.++.++ +|++|+++++++...+..++||||++++
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   81 (327)
T cd05617           2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGG   81 (327)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence            579999999999995 567899999998642   22345577899999888 5999999999999999999999999999


Q ss_pred             CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----CCcccc
Q 024659          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST  214 (264)
Q Consensus       139 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----~~~~~~  214 (264)
                      +|..++.  ....+++..+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||+++....    .....+
T Consensus        82 ~L~~~~~--~~~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (327)
T cd05617          82 DLMFHMQ--RQRKLPEEHARFYAAEICIALNFLHER-GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCG  158 (327)
T ss_pred             cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccC
Confidence            9998885  345699999999999999999999999 999999999999999999999999999875321    223467


Q ss_pred             cccccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       215 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      ++.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus       159 t~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~  198 (327)
T cd05617         159 TPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI  198 (327)
T ss_pred             CcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCc
Confidence            8999999999988999999999999999999999999953

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=2e-38  Score=269.07  Aligned_cols=197  Identities=18%  Similarity=0.249  Sum_probs=172.1

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      +.|+++++||.|+||.||++.+. ++..+|+|.+..... .....+.+|++++++++|+||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   84 (333)
T cd06650           5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH   84 (333)
T ss_pred             hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence            45788899999999999999954 688899998876532 2345688999999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--Ccc
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSY  212 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--~~~  212 (264)
                      +++++|.+++..  ...+++..+..++.|++.||.|||+..+++|+||||+||+++.++.+||+|||++......  ...
T Consensus        85 ~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~  162 (333)
T cd06650          85 MDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF  162 (333)
T ss_pred             CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccC
Confidence            999999999863  3468889999999999999999997537999999999999999999999999998754322  334


Q ss_pred             cccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       213 ~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      .++..|+|||++.+..++.++|+|||||++|+|++|+.||...
T Consensus       163 ~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~  205 (333)
T cd06650         163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP  205 (333)
T ss_pred             CCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence            6788999999999888999999999999999999999998643

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.5e-38  Score=281.72  Aligned_cols=198  Identities=18%  Similarity=0.199  Sum_probs=172.7

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CC-CCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-EN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      ..|.+.+.||.|++|.||++.. .+ +..||+|.+..........+.+|+.+++.++||||+++++++...+..++||||
T Consensus        67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~  146 (478)
T PTZ00267         67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY  146 (478)
T ss_pred             eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence            3478888899999999999984 33 678888887665544555678899999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---
Q 024659          135 MPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (264)
Q Consensus       135 ~~~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---  209 (264)
                      +++++|.+++...  ...++++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++.....   
T Consensus       147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~  225 (478)
T PTZ00267        147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR-KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL  225 (478)
T ss_pred             CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC-CEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc
Confidence            9999999887532  244688999999999999999999999 9999999999999999999999999999865432   


Q ss_pred             ---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 ---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                         ....+|+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus       226 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~  274 (478)
T PTZ00267        226 DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGP  274 (478)
T ss_pred             ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence               2345789999999999888999999999999999999999998754

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-39  Score=278.17  Aligned_cols=198  Identities=25%  Similarity=0.356  Sum_probs=169.4

Q ss_pred             ccccccccCCCCCCCeEEEEEeCC--C---CEEEEEEeCCC---CChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLEN--Q---FRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~--~---~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  128 (264)
                      ++-.+.++||+|+||.||+|.+..  +   ..||+|.....   ......++.+|++++++++|+||++++|++.....+
T Consensus       157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl  236 (474)
T KOG0194|consen  157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL  236 (474)
T ss_pred             cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc
Confidence            334456889999999999999532  2   23899999852   344567899999999999999999999999999999


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      ++|||+|.||+|.++|+. ....++..+...++.+.+.||+|||++ +++||||-++|+|++.++.+||+|||+++....
T Consensus       237 ~ivmEl~~gGsL~~~L~k-~~~~v~~~ek~~~~~~AA~Gl~YLh~k-~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~  314 (474)
T KOG0194|consen  237 MLVMELCNGGSLDDYLKK-NKKSLPTLEKLRFCYDAARGLEYLHSK-NCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQ  314 (474)
T ss_pred             EEEEEecCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHhHHHHHHHC-CCcchhHhHHHheecCCCeEEeCccccccCCcc
Confidence            999999999999999975 333699999999999999999999999 999999999999999999999999999876542


Q ss_pred             CCc----ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          209 GRS----YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       209 ~~~----~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      -..    ..-...|+|||.+....++.++|||||||++||+++ |..|+++-.
T Consensus       315 ~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~  367 (474)
T KOG0194|consen  315 YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMK  367 (474)
T ss_pred             eeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCC
Confidence            111    124588999999999999999999999999999999 677776543

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.2e-38  Score=270.67  Aligned_cols=193  Identities=20%  Similarity=0.299  Sum_probs=164.5

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCC--CChhHHHHHHHHHHHhcCCCCCccccceeeEeCC-----cceE
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ERLL  130 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~l  130 (264)
                      |++.+.||+|+||.||++.. .++..||+|++...  .......+.+|++++++++||||+++++++....     ..++
T Consensus         2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l   81 (338)
T cd07859           2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV   81 (338)
T ss_pred             eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence            67788899999999999995 56889999998753  2233456889999999999999999999886432     4799


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-  209 (264)
                      ||||+. ++|.+++.  ....+++..+..++.||+.||.|||+. +++||||||+||+++.++.+||+|||+++..... 
T Consensus        82 v~e~~~-~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~  157 (338)
T cd07859          82 VFELME-SDLHQVIK--ANDDLTPEHHQFFLYQLLRALKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLARVAFNDT  157 (338)
T ss_pred             EEecCC-CCHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCcEEEccCcccccccccc
Confidence            999995 57998886  344689999999999999999999999 9999999999999999999999999998754221 


Q ss_pred             ------CcccccccccccccccC--CCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 ------RSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 ------~~~~~~~~y~aPE~~~~--~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                            ....++..|+|||++.+  ..++.++|||||||++|||++|++||...
T Consensus       158 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~  211 (338)
T cd07859         158 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGK  211 (338)
T ss_pred             CccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence                  23467899999999875  56899999999999999999999999754

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=4.8e-39  Score=271.21  Aligned_cols=191  Identities=19%  Similarity=0.232  Sum_probs=166.7

Q ss_pred             ccCCCCCCCeEEEEEe----CCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           63 SEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        63 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      +.||+|+||.||++..    .+++.+|+|++.....  .....+.+|++++++++|+||+++++++..++..++||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5679999999999874    3578999999975432  223456789999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----Ccc
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSY  212 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~~~  212 (264)
                      +++|.+++.  ....+++..+..++.||+.||.|||+. +++||||||+||+++.++.++|+|||++......    ...
T Consensus        82 ~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~  158 (318)
T cd05582          82 GGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSL-GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF  158 (318)
T ss_pred             CCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecc
Confidence            999999885  345689999999999999999999999 9999999999999999999999999998754332    234


Q ss_pred             cccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       213 ~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .++..|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus       159 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~  202 (318)
T cd05582         159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD  202 (318)
T ss_pred             cCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCC
Confidence            57889999999998889999999999999999999999997543

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=1.5e-38  Score=268.81  Aligned_cols=195  Identities=18%  Similarity=0.245  Sum_probs=166.9

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCC-CCCccccceeeEeCCcceEEEe
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      ++.++.||+|+||.||++.. .+++.||+|.+....   ....+.+..|..++..+. |++|+++++++...+..++|||
T Consensus         2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (323)
T cd05615           2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME   81 (323)
T ss_pred             ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence            45667789999999999995 568899999997532   223455778888888886 5778889999988889999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----C
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----G  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----~  209 (264)
                      |+++++|.+++.  ....+++.++..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++.....    .
T Consensus        82 y~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~-~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~  158 (323)
T cd05615          82 YVNGGDLMYHIQ--QVGKFKEPQAVFYAAEISVGLFFLHRR-GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTT  158 (323)
T ss_pred             CCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCCCEEEeccccccccCCCCccc
Confidence            999999999886  345689999999999999999999999 999999999999999999999999999875322    2


Q ss_pred             CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ....++..|+|||++.+..++.++|+||||+++|||++|+.||....
T Consensus       159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~  205 (323)
T cd05615         159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGED  205 (323)
T ss_pred             cCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCC
Confidence            23457899999999998889999999999999999999999997654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=2.5e-38  Score=262.24  Aligned_cols=190  Identities=20%  Similarity=0.285  Sum_probs=165.0

Q ss_pred             CCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh---hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCCH
Q 024659           65 HGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL  140 (264)
Q Consensus        65 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL  140 (264)
                      ||+|+||+||++.+ .+++.+|+|.+......   ..+.+..|+++++.++|+||+++.+++......++||||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            59999999999995 46889999998754322   234567899999999999999999999988899999999999999


Q ss_pred             HHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----Ccccc
Q 024659          141 AKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYST  214 (264)
Q Consensus       141 ~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~  214 (264)
                      ...+...  ....+++..+..++.||+.||.|||++ +++||||||+||+++.++.++|+|||++......    ....+
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g  159 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR-RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAG  159 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCC
Confidence            8877432  335689999999999999999999999 9999999999999999999999999998754332    23467


Q ss_pred             cccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       215 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ++.|+|||++.+..++.++|+||||+++|||++|+.||...
T Consensus       160 ~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~  200 (280)
T cd05608         160 TPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRAR  200 (280)
T ss_pred             CcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence            88999999999989999999999999999999999999754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.7e-39  Score=249.29  Aligned_cols=198  Identities=21%  Similarity=0.280  Sum_probs=176.7

Q ss_pred             ccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCCh---hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      +++-+.||.|-||.||.|+ ..++..||+|++.+..-.   ....+.+|+++-..|+||||+++++++.+....|+++||
T Consensus        24 feigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEy  103 (281)
T KOG0580|consen   24 FEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEY  103 (281)
T ss_pred             ccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEe
Confidence            4566677999999999999 677889999999865422   235688999999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC--CCCcc
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--DGRSY  212 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~--~~~~~  212 (264)
                      .+.|+++..+.......+++.....++.|++.|+.|+|.+ +++||||||+|+|++..+.+|++|||-+-...  .....
T Consensus       104 a~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k-~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tl  182 (281)
T KOG0580|consen  104 APRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTL  182 (281)
T ss_pred             cCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC-CcccCCCCHHHhccCCCCCeeccCCCceeecCCCCceee
Confidence            9999999999876677789999999999999999999999 99999999999999999999999999765543  23456


Q ss_pred             cccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       213 ~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                      +||..|.+||+..+..++..+|+|++|++.||++.|.+||.+...
T Consensus       183 cgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~  227 (281)
T KOG0580|consen  183 CGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH  227 (281)
T ss_pred             ecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh
Confidence            899999999999999999999999999999999999999986553

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.2e-38  Score=272.78  Aligned_cols=189  Identities=16%  Similarity=0.151  Sum_probs=165.6

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      -..|.++++||.|+||.||++.+ ..++.||+|....      ..+.+|++++++++||||+++++++......++++|+
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~  164 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR  164 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence            35689999999999999999995 5688999997542      3467899999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC-----C
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-----G  209 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~-----~  209 (264)
                      +. ++|..++.  ....+++..++.++.||+.||.|||++ +|+||||||+||+++.++.++|+|||++.....     .
T Consensus       165 ~~-~~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~ylH~~-~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~  240 (391)
T PHA03212        165 YK-TDLYCYLA--AKRNIAICDILAIERSVLRAIQYLHEN-RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKY  240 (391)
T ss_pred             CC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHhEEEcCCCCEEEEeCCccccccccccccc
Confidence            85 57888875  345688999999999999999999999 999999999999999999999999999864322     1


Q ss_pred             CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      ....+|+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus       241 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~  285 (391)
T PHA03212        241 YGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFE  285 (391)
T ss_pred             ccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence            234689999999999988899999999999999999999987754

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=3.5e-38  Score=262.42  Aligned_cols=197  Identities=19%  Similarity=0.220  Sum_probs=164.1

Q ss_pred             cccccccCCCCCCCeEEEEEe--CCCCEEEEEEeCCCCCh--hHHHHHHHHHHHhcC---CCCCccccceeeEe-----C
Q 024659           58 MENIVSEHGEKAPNVVYKGKL--ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQL---RNRRLANLLGCCCE-----G  125 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l---~h~~i~~~~~~~~~-----~  125 (264)
                      .|++++.||+|+||.||++..  .++..||+|.+......  ....+.+|+.+++.+   +||||+++++++..     .
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            477888999999999999985  34678999998754322  233455677666655   69999999999853     3


Q ss_pred             CcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcc
Q 024659          126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (264)
Q Consensus       126 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~  205 (264)
                      ...++|+||+. ++|.+++.......+++..+..++.|++.||.|||++ +++||||||+||+++.++.++|+|||++..
T Consensus        82 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~-~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~  159 (290)
T cd07862          82 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLARI  159 (290)
T ss_pred             CcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEEcCCCCEEEccccceEe
Confidence            45889999996 5899988754556789999999999999999999999 999999999999999999999999999875


Q ss_pred             cCCC---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          206 SRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       206 ~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ....   ....++..|+|||++.+..++.++||||||+++|||++|++||....
T Consensus       160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~  213 (290)
T cd07862         160 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS  213 (290)
T ss_pred             ccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCC
Confidence            4432   23457889999999988889999999999999999999999997543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=5.6e-38  Score=259.76  Aligned_cols=190  Identities=17%  Similarity=0.253  Sum_probs=165.2

Q ss_pred             CCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC---hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCCH
Q 024659           65 HGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL  140 (264)
Q Consensus        65 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL  140 (264)
                      ||+|+||.||++.. .+++.+|+|++.....   .....+..|++++++++||||+++++++......++||||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            59999999999994 5688999999974321   1223456799999999999999999999999999999999999999


Q ss_pred             HHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC---ccccccc
Q 024659          141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---SYSTNLA  217 (264)
Q Consensus       141 ~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~---~~~~~~~  217 (264)
                      .+++.......+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++.......   ...++..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~  159 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSM-DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNG  159 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC-CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCC
Confidence            9888654555688999999999999999999999 99999999999999999999999999987654332   2457889


Q ss_pred             ccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       218 y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      |+|||++.+..++.++|+|||||++|||++|+.||...
T Consensus       160 y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~  197 (277)
T cd05607         160 YMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDH  197 (277)
T ss_pred             ccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCC
Confidence            99999999888999999999999999999999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=9.7e-39  Score=275.23  Aligned_cols=198  Identities=18%  Similarity=0.229  Sum_probs=177.4

Q ss_pred             CccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      -..+++-+.||.|+-|.|-+|+ ...|+.+|||.+.+..   ......+.+|+-+|+-+.|||++.+++++.+..++|+|
T Consensus        11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv   90 (786)
T KOG0588|consen   11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV   90 (786)
T ss_pred             ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence            3557788889999999999999 5679999999998762   12234578999999999999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--  209 (264)
                      .||+++|.|++++.  ..+++++..+.++++||+.|+.|+|.. +|+|||+||+|+|+|.++++||+|||+|.....+  
T Consensus        91 lEyv~gGELFdylv--~kG~l~e~eaa~ff~QIi~gv~yCH~~-~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gkl  167 (786)
T KOG0588|consen   91 LEYVPGGELFDYLV--RKGPLPEREAAHFFRQILDGVSYCHAF-NICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKL  167 (786)
T ss_pred             EEecCCchhHHHHH--hhCCCCCHHHHHHHHHHHHHHHHHhhh-cceeccCCchhhhhhcccCEeeeccceeecccCCcc
Confidence            99999999999997  567899999999999999999999999 9999999999999999999999999999876554  


Q ss_pred             -CcccccccccccccccCCCCC-CccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 -RSYSTNLAFTPPEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 -~~~~~~~~y~aPE~~~~~~~~-~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                       .+.+|++.|+|||++.+.+|. .++||||-||+||.|++|+.||-++.
T Consensus       168 LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdN  216 (786)
T KOG0588|consen  168 LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDN  216 (786)
T ss_pred             ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCcc
Confidence             456889999999999999985 58999999999999999999998543

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=2e-38  Score=271.10  Aligned_cols=193  Identities=17%  Similarity=0.188  Sum_probs=165.1

Q ss_pred             CCCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      ..+++++.++.||.|+||.||++.+ .+++.||+|.+...... ....+.+|+++++.++|+||+++++++...+..++|
T Consensus        71 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  150 (353)
T PLN00034         71 KSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVL  150 (353)
T ss_pred             CCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEE
Confidence            3456678889999999999999995 46889999999754322 345688999999999999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--  209 (264)
                      +||+.+++|.+..      ...+..+..++.||+.||.|||++ +++||||||+||++++++.+||+|||++......  
T Consensus       151 ~e~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~  223 (353)
T PLN00034        151 LEFMDGGSLEGTH------IADEQFLADVARQILSGIAYLHRR-HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD  223 (353)
T ss_pred             EecCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCCCCEEEcccccceecccccc
Confidence            9999999886532      355677889999999999999999 9999999999999999999999999998765432  


Q ss_pred             --CcccccccccccccccC-----CCCCCccceechHHHHHHHHhCCCCCC
Q 024659          210 --RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~~~-----~~~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                        ....++..|+|||++..     ...+.++|||||||++|||++|+.||.
T Consensus       224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~  274 (353)
T PLN00034        224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFG  274 (353)
T ss_pred             cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence              33467899999998743     224568999999999999999999997

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=7.6e-38  Score=256.50  Aligned_cols=198  Identities=24%  Similarity=0.371  Sum_probs=173.5

Q ss_pred             CccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      .+.++++++||+|+||.||++...++..||+|.+.... ...+.+.+|+.++++++|+||+++++.+...+..++++||+
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM   83 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence            45688999999999999999998888889999987644 34567889999999999999999999999888999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC-----
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----  210 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-----  210 (264)
                      ++++|.+++.......+++.++..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.......     
T Consensus        84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~-~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~  162 (261)
T cd05072          84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK-NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE  162 (261)
T ss_pred             CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhhEEecCCCcEEECCCccceecCCCceeccC
Confidence            999999998754456788899999999999999999999 99999999999999999999999999987654322     


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      ...++..|+|||++....++.++|+||||+++|+|++ |..||...
T Consensus       163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~  208 (261)
T cd05072         163 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGM  208 (261)
T ss_pred             CCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCC
Confidence            1234567999999988889999999999999999998 88888653

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=5.6e-38  Score=260.56  Aligned_cols=190  Identities=16%  Similarity=0.256  Sum_probs=163.7

Q ss_pred             cCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChh---HHHHHHHHHHHhcCCCCCccccceeeEe----CCcceEEEecCC
Q 024659           64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLLVAEYMP  136 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~  136 (264)
                      .+|+|+++.||+|.+ +++.||+|.+.......   .+.+.+|+.++++++||||+++++++.+    ....++|+||++
T Consensus        27 ~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~  105 (283)
T PHA02988         27 LIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCT  105 (283)
T ss_pred             EEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCC
Confidence            459999999999998 46699999998654333   4567899999999999999999999876    346789999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-Cccccc
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYSTN  215 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-~~~~~~  215 (264)
                      +|+|.+++..  .+.+++.....++.|++.||.+||+..+++||||||+||++++++.+||+|||+++..... ....++
T Consensus       106 ~g~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~  183 (283)
T PHA02988        106 RGYLREVLDK--EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNF  183 (283)
T ss_pred             CCcHHHHHhh--CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccccccccCc
Confidence            9999999963  4578899999999999999999998438899999999999999999999999998754432 234578


Q ss_pred             ccccccccccC--CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          216 LAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       216 ~~y~aPE~~~~--~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ..|+|||++.+  ..++.++||||||+++|||++|+.||....
T Consensus       184 ~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~  226 (283)
T PHA02988        184 MVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT  226 (283)
T ss_pred             ccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC
Confidence            89999999976  579999999999999999999999997543

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=3.9e-38  Score=265.65  Aligned_cols=190  Identities=19%  Similarity=0.281  Sum_probs=164.5

Q ss_pred             cCCCCCCCeEEEEEeC-CCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEEEecCCCC
Q 024659           64 EHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND  138 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~  138 (264)
                      .||.|+||.||++.+. +++.+|+|.+....   ......+.+|.+++..+ +||||+++++++...+..++||||++++
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~   81 (318)
T cd05570           2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGG   81 (318)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence            5799999999999954 57899999997532   22345567888888887 6999999999999999999999999999


Q ss_pred             CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----CCcccc
Q 024659          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST  214 (264)
Q Consensus       139 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----~~~~~~  214 (264)
                      +|...+.  ....+++..+..++.|++.||.|||++ +++|+||||+||++++++.++|+|||++.....    .....+
T Consensus        82 ~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (318)
T cd05570          82 DLMFHIQ--RSGRFDEPRARFYAAEIVLGLQFLHER-GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCG  158 (318)
T ss_pred             CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceec
Confidence            9998886  344789999999999999999999999 999999999999999999999999999864321    122357


Q ss_pred             cccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       215 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      +..|+|||++.+..++.++|+|||||++|+|++|+.||....
T Consensus       159 ~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~  200 (318)
T cd05570         159 TPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD  200 (318)
T ss_pred             CccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC
Confidence            899999999999899999999999999999999999997543

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=1.1e-37  Score=254.99  Aligned_cols=196  Identities=24%  Similarity=0.392  Sum_probs=169.8

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      +++++++.||+|+||.||++.+.++..+|+|.+.... .....+.+|++++++++||||+++++++...+..+++|||++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            4577888899999999999998888889999987543 234568889999999999999999999999899999999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc-----
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-----  211 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~-----  211 (264)
                      +++|.+++.. ....+++..+..++.|++.||.|||++ +++|+||+|+||+++.++.++|+|||.++.......     
T Consensus        83 ~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~  160 (256)
T cd05114          83 NGCLLNYLRQ-RQGKLSKDMLLSMCQDVCEGMEYLERN-SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSG  160 (256)
T ss_pred             CCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHC-CccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCC
Confidence            9999998864 223588999999999999999999999 999999999999999999999999999875433221     


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      ..++..|+|||++.+..++.++|+||||+++|||++ |+.||...
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~  205 (256)
T cd05114         161 AKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKK  205 (256)
T ss_pred             CCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCC
Confidence            233467999999988889999999999999999999 88888644

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=9.3e-38  Score=261.72  Aligned_cols=197  Identities=23%  Similarity=0.350  Sum_probs=165.1

Q ss_pred             ccccccccCCCCCCCeEEEEEeCC-----------------CCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCcccc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLEN-----------------QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANL  118 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~  118 (264)
                      ..|.+.++||+|+||.||++.+.+                 +..||+|.+...... ....+.+|++++.+++|+||+++
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~   84 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL   84 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence            356778889999999999997532                 346999999865433 34568899999999999999999


Q ss_pred             ceeeEeCCcceEEEecCCCCCHHHhhhcCC-----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeec
Q 024659          119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE-----------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHD  181 (264)
Q Consensus       119 ~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-----------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~d  181 (264)
                      ++++...+..+++|||+++++|.+++....                 ...+++..+..++.||+.||.|||+. +++|+|
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~ivH~d  163 (304)
T cd05096          85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL-NFVHRD  163 (304)
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC-CccccC
Confidence            999999889999999999999999885321                 12467788999999999999999999 999999


Q ss_pred             cCCCCeeeCCCCCeEEcccCCCcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHhC--CCCCC
Q 024659          182 LNAYRIVFDDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG--KHIPP  253 (264)
Q Consensus       182 l~~~Nil~~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g--~~~~~  253 (264)
                      |||+||+++.++.+||+|||+++......      ...++..|+|||++....++.++||||||+++|||+++  ..||.
T Consensus       164 lkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~  243 (304)
T cd05096         164 LATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYG  243 (304)
T ss_pred             cchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCC
Confidence            99999999999999999999987653322      22346789999999888899999999999999999874  45554


Q ss_pred             C
Q 024659          254 S  254 (264)
Q Consensus       254 ~  254 (264)
                      .
T Consensus       244 ~  244 (304)
T cd05096         244 E  244 (304)
T ss_pred             c
Confidence            3

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=9.3e-38  Score=256.91  Aligned_cols=198  Identities=19%  Similarity=0.313  Sum_probs=168.4

Q ss_pred             CccccccccCCCCCCCeEEEEEeC----CCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      ...+++.+.||+|+||.||+|.+.    .+..||+|.++.... .....+.+|+..+++++||||+++++++...+..++
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   83 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI   83 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence            345677888999999999999753    356899999986532 234568899999999999999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~  210 (264)
                      ||||+++++|.+++.. ....+++.+++.++.|++.||.|||+. +++|+||||+||+++.++.++++|||.+.......
T Consensus        84 v~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~i~~al~~lH~~-~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~  161 (266)
T cd05064          84 VTEYMSNGALDSFLRK-HEGQLVAGQLMGMLPGLASGMKYLSEM-GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA  161 (266)
T ss_pred             EEEeCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence            9999999999999864 335689999999999999999999999 99999999999999999999999999876432221


Q ss_pred             -----cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          211 -----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       211 -----~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                           ...++..|+|||.+.+..++.++||||||+++||+++ |+.||...
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~  212 (266)
T cd05064         162 IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDM  212 (266)
T ss_pred             hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcC
Confidence                 1233568999999998889999999999999999775 99888643

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=6.5e-38  Score=266.55  Aligned_cols=197  Identities=21%  Similarity=0.202  Sum_probs=176.6

Q ss_pred             cccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCCh---hHHHHHHHHHHHhcCC-CCCccccceeeEeCCcceEEE
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP---DARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      .|++.+.||.|.||.||++... +|+.+|+|.+.+....   ..+.+.+|+++|++++ ||||+.+++++.+....++||
T Consensus        36 ~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvm  115 (382)
T KOG0032|consen   36 KYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVM  115 (382)
T ss_pred             cEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEE
Confidence            3667778999999999999954 5999999999876543   3457899999999998 999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC----CCCeEEcccCCCcccCC
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD----DVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~----~~~~kl~dfg~~~~~~~  208 (264)
                      |++.||.|.+.+...   .+++..+..++.|++.+++|||+. |++||||||+|+|+..    ++.++++|||++.....
T Consensus       116 EL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~-gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~  191 (382)
T KOG0032|consen  116 ELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSL-GVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP  191 (382)
T ss_pred             EecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence            999999999999754   399999999999999999999999 9999999999999963    25799999999998776


Q ss_pred             C---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCccc
Q 024659          209 G---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS  258 (264)
Q Consensus       209 ~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~~  258 (264)
                      .   ....||+.|+|||++....|+..+||||+|+++|.|++|.+||..+...
T Consensus       192 ~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~  244 (382)
T KOG0032|consen  192 GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEF  244 (382)
T ss_pred             CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChh
Confidence            3   3457899999999999999999999999999999999999999987754

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=2.2e-37  Score=257.94  Aligned_cols=206  Identities=17%  Similarity=0.225  Sum_probs=177.2

Q ss_pred             HHHHHhCCCccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCC
Q 024659           48 TLRTATSGFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD  126 (264)
Q Consensus        48 ~~~~~~~~~~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~  126 (264)
                      ++.+.-...+.|+++++||.|+||.||++... ++..+++|.+........+.+.+|+.+++.++|+||+++++.+..++
T Consensus         3 ~~~~~~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   82 (292)
T cd06644           3 HVRRDLDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDG   82 (292)
T ss_pred             hhhcccCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC
Confidence            45555556677899999999999999999954 58899999998776666777889999999999999999999999999


Q ss_pred             cceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCccc
Q 024659          127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (264)
Q Consensus       127 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~  206 (264)
                      ..++||||+++++|..++.. ....+++..+..++.|++.++.+||+. +++|+||+|+||+++.++.++|+|||++...
T Consensus        83 ~~~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~  160 (292)
T cd06644          83 KLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVICRQMLEALQYLHSM-KIIHRDLKAGNVLLTLDGDIKLADFGVSAKN  160 (292)
T ss_pred             eEEEEEecCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhcC-CeeecCCCcceEEEcCCCCEEEccCccceec
Confidence            99999999999999887753 345689999999999999999999999 9999999999999999999999999987653


Q ss_pred             CCC----CcccccccccccccccC-----CCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          207 RDG----RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       207 ~~~----~~~~~~~~y~aPE~~~~-----~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ...    ....++..|+|||++.+     ..++.++|+||||+++|||++|..||...
T Consensus       161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~  218 (292)
T cd06644         161 VKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL  218 (292)
T ss_pred             cccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccc
Confidence            222    23456788999999853     34788999999999999999999998653

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-38  Score=288.57  Aligned_cols=200  Identities=27%  Similarity=0.420  Sum_probs=172.0

Q ss_pred             cccccccCCCCCCCeEEEEEeCC--CC----EEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           58 MENIVSEHGEKAPNVVYKGKLEN--QF----RIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~~--~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      .-++...||.|+||.||.|...+  +.    .||+|.+.+.. .++..+|.+|..++++++||||++++|+|.+....+|
T Consensus       693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i  772 (1025)
T KOG1095|consen  693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI  772 (1025)
T ss_pred             heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence            34566678999999999999543  32    48999998764 4456789999999999999999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcc
Q 024659          131 VAEYMPNDTLAKHLFHWE-----TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~-----~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~  205 (264)
                      ++|||++|+|..+|++.+     ...++....+.++.||++|++||+++ ++|||||.++|+|+++...+||+|||+|+.
T Consensus       773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~-~fvHRDLAaRNCLL~~~r~VKIaDFGlArD  851 (1025)
T KOG1095|consen  773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK-HFVHRDLAARNCLLDERRVVKIADFGLARD  851 (1025)
T ss_pred             EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC-CCcCcchhhhheeecccCcEEEcccchhHh
Confidence            999999999999998642     45678899999999999999999999 999999999999999999999999999995


Q ss_pred             cCCCCcc------cccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCccc
Q 024659          206 SRDGRSY------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS  258 (264)
Q Consensus       206 ~~~~~~~------~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~~  258 (264)
                      +.....+      .-...|||||.+.++.++.|+|||||||+|||++|...+++.+.++
T Consensus       852 iy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n  910 (1025)
T KOG1095|consen  852 IYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN  910 (1025)
T ss_pred             hhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcch
Confidence            4433221      2347899999999999999999999999999999987666655544

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=6.7e-38  Score=269.65  Aligned_cols=198  Identities=24%  Similarity=0.383  Sum_probs=166.8

Q ss_pred             cccccccCCCCCCCeEEEEEeC------CCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcC-CCCCccccceeeEeCCcce
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~  129 (264)
                      .+++.+.||+|+||.||++.+.      ++..||+|.+...... ..+.+.+|+++++.+ +|+||+++++++......+
T Consensus        39 ~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~  118 (374)
T cd05106          39 NLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVL  118 (374)
T ss_pred             HceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeE
Confidence            4677888999999999998742      2458999999865433 345688999999999 8999999999999999999


Q ss_pred             EEEecCCCCCHHHhhhcCC-------------------------------------------------------------
Q 024659          130 LVAEYMPNDTLAKHLFHWE-------------------------------------------------------------  148 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~-------------------------------------------------------------  148 (264)
                      +||||+++++|.+++....                                                             
T Consensus       119 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (374)
T cd05106         119 VITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSK  198 (374)
T ss_pred             EeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccccc
Confidence            9999999999999885311                                                             


Q ss_pred             -------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc------cccc
Q 024659          149 -------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS------YSTN  215 (264)
Q Consensus       149 -------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~------~~~~  215 (264)
                             ...+++.+++.++.||+.||.|||++ +++||||||+||++++++.++|+|||+++.......      ..++
T Consensus       199 ~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~  277 (374)
T cd05106         199 DEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK-NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLP  277 (374)
T ss_pred             chhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCc
Confidence                   12467888999999999999999999 999999999999999999999999999875433221      1234


Q ss_pred             ccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       216 ~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ..|+|||++.+..++.++||||||+++|||++ |+.||+...
T Consensus       278 ~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~  319 (374)
T cd05106         278 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGIL  319 (374)
T ss_pred             cceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccc
Confidence            67999999988889999999999999999997 999987543

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=1.5e-37  Score=258.17  Aligned_cols=197  Identities=20%  Similarity=0.254  Sum_probs=169.8

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh---hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      |+..+.||.|+||.||++.+ .+++.+|+|.+......   ....+.+|+.++++++|++++++++.+.+.+..++||||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            34556679999999999995 46889999998754322   223467899999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC---c
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---S  211 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~---~  211 (264)
                      +++++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......   .
T Consensus        82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  160 (285)
T cd05630          82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE-RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG  160 (285)
T ss_pred             cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccC
Confidence            9999999988654445689999999999999999999999 99999999999999999999999999987543322   2


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ..++..|+|||++.+..++.++|+||||+++|+|++|+.||....
T Consensus       161 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~  205 (285)
T cd05630         161 RVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK  205 (285)
T ss_pred             CCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCC
Confidence            367889999999998889999999999999999999999997543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=1.4e-37  Score=254.80  Aligned_cols=198  Identities=24%  Similarity=0.392  Sum_probs=175.3

Q ss_pred             cccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCC
Q 024659           58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN  137 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  137 (264)
                      +|.+++.||.|+||.||+|...++..+++|.+..........+.+|+++++.++|+||+++++++...+..+++|||+++
T Consensus         7 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   86 (261)
T cd05148           7 EFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEK   86 (261)
T ss_pred             HHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeeccc
Confidence            46778889999999999999877889999999877655667789999999999999999999999999999999999999


Q ss_pred             CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC----ccc
Q 024659          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----SYS  213 (264)
Q Consensus       138 ~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~----~~~  213 (264)
                      ++|.+++.......+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||.+.......    ...
T Consensus        87 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~  165 (261)
T cd05148          87 GSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ-NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKK  165 (261)
T ss_pred             CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccCcceEEEcCCceEEEccccchhhcCCccccccCCC
Confidence            9999999765556789999999999999999999999 99999999999999999999999999987654321    223


Q ss_pred             ccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       214 ~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ++..|+|||.+.+..++.++|+||||+++++|++ |+.||....
T Consensus       166 ~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~  209 (261)
T cd05148         166 IPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN  209 (261)
T ss_pred             CceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC
Confidence            4567999999988889999999999999999998 788886543

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=1.5e-37  Score=259.58  Aligned_cols=201  Identities=18%  Similarity=0.259  Sum_probs=176.8

Q ss_pred             HhCCCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           52 ATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        52 ~~~~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      .......|++++.||.|++|.||++.. .++..+++|.+........+.+.+|+.+++.++|+|++++++.+......++
T Consensus        15 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~l   94 (296)
T cd06654          15 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV   94 (296)
T ss_pred             cCCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEE
Confidence            344456688889999999999999994 5688999999987665666778899999999999999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-  209 (264)
                      |+||+++++|.+++.   ...+++.++..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++...... 
T Consensus        95 v~e~~~~~~L~~~~~---~~~~~~~~~~~i~~ql~~aL~~LH~~-gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~  170 (296)
T cd06654          95 VMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ  170 (296)
T ss_pred             eecccCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEcCCCCEEECccccchhccccc
Confidence            999999999999884   34578899999999999999999999 9999999999999999999999999988754332 


Q ss_pred             ---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                         ....++..|+|||.+.+..++.++|+||||+++|+|++|+.||....
T Consensus       171 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~  220 (296)
T cd06654         171 SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN  220 (296)
T ss_pred             cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Confidence               23356789999999998889999999999999999999999997543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=1.8e-37  Score=257.70  Aligned_cols=196  Identities=20%  Similarity=0.243  Sum_probs=169.3

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC---hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      |+..+.||.|+||+||++.+ .+++.+|+|.+.....   .....+.+|++++++++|+||+.+.+.+...+..++++||
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            34556679999999999995 5688999999875432   2234467899999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---Cc
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RS  211 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---~~  211 (264)
                      +++++|.+++.......+++..+..++.|++.||.|||+. +++||||+|+||++++++.++|+|||++......   ..
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~  160 (285)
T cd05632          82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE-NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRG  160 (285)
T ss_pred             ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccC
Confidence            9999999888654445799999999999999999999999 9999999999999999999999999988654322   23


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..++..|+|||++.+..++.++|+||||+++|+|++|..||...
T Consensus       161 ~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~  204 (285)
T cd05632         161 RVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGR  204 (285)
T ss_pred             CCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCC
Confidence            46789999999999888999999999999999999999999754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.9e-37  Score=253.13  Aligned_cols=198  Identities=22%  Similarity=0.355  Sum_probs=171.9

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      +.+++++.||.|++|.||++.+.+++.||+|.++... ...+.+.+|++++++++|+||+++++++...+..++++||++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   84 (261)
T cd05068           6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMK   84 (261)
T ss_pred             hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeeccc
Confidence            3467788899999999999998777899999997654 235668899999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc--c--
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS--Y--  212 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~--~--  212 (264)
                      +++|.+++.......+++..+..++.|++.|+.+||++ +++|+||+|+||+++.++.++|+|||++........  .  
T Consensus        85 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  163 (261)
T cd05068          85 YGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ-NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREG  163 (261)
T ss_pred             CCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCC
Confidence            99999999754445789999999999999999999999 999999999999999999999999999876543211  1  


Q ss_pred             -cccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          213 -STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       213 -~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                       ..+..|+|||++.+..++.++|+||||++++||++ |+.||.+..
T Consensus       164 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~  209 (261)
T cd05068         164 AKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT  209 (261)
T ss_pred             CcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC
Confidence             12357999999998889999999999999999999 888886543

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=1.4e-37  Score=261.27  Aligned_cols=198  Identities=18%  Similarity=0.284  Sum_probs=168.7

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      ...|.++++||+|+||.||++.. .++..+|+|.+...... ....+.+|++++++++|+||+++++++..++..++|||
T Consensus         5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   84 (309)
T cd07872           5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE   84 (309)
T ss_pred             CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence            35688899999999999999995 46788999998754322 23457789999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----  209 (264)
                      |+++ +|.+++.. ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++......    
T Consensus        85 ~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~  161 (309)
T cd07872          85 YLDK-DLKQYMDD-CGNIMSMHNVKIFLYQILRGLAYCHRR-KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTY  161 (309)
T ss_pred             CCCC-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEECccccceecCCCcccc
Confidence            9975 78887754 344578899999999999999999999 9999999999999999999999999998754322    


Q ss_pred             CcccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ....++..|+|||.+.+. .++.++||||||+++++|++|+.||....
T Consensus       162 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~  209 (309)
T cd07872         162 SNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGST  209 (309)
T ss_pred             ccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            223567899999998754 58899999999999999999999997543

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=1.4e-37  Score=285.33  Aligned_cols=199  Identities=19%  Similarity=0.198  Sum_probs=170.4

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCC---hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      ..|++++.||+|+||.||+|.+. .++.||+|++.....   ...+++.+|++++++++||||+++++++.+.+..+++|
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            45788889999999999999954 588999999975422   22456889999999999999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcCC---------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCC
Q 024659          133 EYMPNDTLAKHLFHWE---------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~---------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~  203 (264)
                      ||+++++|.+++....         ....++..++.++.||+.||.|||++ +++||||||+||+++.++.++|+|||++
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~-GIIHRDLKPeNILLd~dg~vKLiDFGLA  160 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK-GVLHRDLKPDNILLGLFGEVVILDWGAA  160 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC-CccccCCchheEEEcCCCCEEEEecCcc
Confidence            9999999999885311         12355677889999999999999999 9999999999999999999999999998


Q ss_pred             cccCC----------------------CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          204 KNSRD----------------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       204 ~~~~~----------------------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .....                      .....||+.|+|||++.+..++.++|||||||+++||++|+.||....
T Consensus       161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~  235 (932)
T PRK13184        161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKK  235 (932)
T ss_pred             eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcc
Confidence            75411                      012357899999999998899999999999999999999999996543

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=2.8e-37  Score=253.60  Aligned_cols=198  Identities=23%  Similarity=0.355  Sum_probs=171.1

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      .++.+.++||.|+||.||++.+ ..++.+++|.+.... .....+.+|++++++++|+||+++++++...+..++++||+
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM   84 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence            3466778889999999999995 458899999987543 34567889999999999999999999999889999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc----
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS----  211 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~----  211 (264)
                      ++++|.+++.......+++..++.++.|++.||.|||++ +++|+||||+||++++++.++|+|||++........    
T Consensus        85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~  163 (263)
T cd05052          85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA  163 (263)
T ss_pred             CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccCcceEEEcCCCcEEeCCCccccccccceeeccC
Confidence            999999998654455689999999999999999999999 999999999999999999999999999876543321    


Q ss_pred             -ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          212 -YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       212 -~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                       ...+..|+|||.+.+..++.++||||||+++|||++ |..||+...
T Consensus       164 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~  210 (263)
T cd05052         164 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID  210 (263)
T ss_pred             CCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC
Confidence             123467999999998889999999999999999998 888886543

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=1.6e-37  Score=259.54  Aligned_cols=204  Identities=18%  Similarity=0.261  Sum_probs=178.7

Q ss_pred             HHHHHhCCCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCC
Q 024659           48 TLRTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD  126 (264)
Q Consensus        48 ~~~~~~~~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~  126 (264)
                      ++....+....|.+++.||+|+||.||++.. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++..++
T Consensus        10 ~~~~~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~   89 (297)
T cd06656          10 SIVSVGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD   89 (297)
T ss_pred             hhcccCChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence            3444445557788999999999999999995 578899999998766555667889999999999999999999999999


Q ss_pred             cceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCccc
Q 024659          127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (264)
Q Consensus       127 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~  206 (264)
                      ..++|+||+++++|.+++.   ...+++.++..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++...
T Consensus        90 ~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~~-~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~  165 (297)
T cd06656          90 ELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALDFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQI  165 (297)
T ss_pred             EEEEeecccCCCCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEECcCccceEc
Confidence            9999999999999999884   34588899999999999999999999 9999999999999999999999999998754


Q ss_pred             CCC----CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          207 RDG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       207 ~~~----~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ...    ....++..|+|||.+.+..++.++|+||||+++|+|++|+.||...
T Consensus       166 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~  218 (297)
T cd06656         166 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNE  218 (297)
T ss_pred             cCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            332    2235678899999999888999999999999999999999999654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=1.7e-37  Score=267.29  Aligned_cols=197  Identities=23%  Similarity=0.343  Sum_probs=165.9

Q ss_pred             cccccccCCCCCCCeEEEEEe------CCCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcce
Q 024659           58 MENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~  129 (264)
                      ++++.+.||.|+||.||++.+      ..+..||+|+++... ....+.+.+|++++..+ +||||+++++++...+..+
T Consensus        36 ~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~  115 (375)
T cd05104          36 RLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTL  115 (375)
T ss_pred             HeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcce
Confidence            466778889999999999973      236689999997543 23345688999999999 8999999999999999999


Q ss_pred             EEEecCCCCCHHHhhhcCC-------------------------------------------------------------
Q 024659          130 LVAEYMPNDTLAKHLFHWE-------------------------------------------------------------  148 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~-------------------------------------------------------------  148 (264)
                      +||||+++|+|.+++....                                                             
T Consensus       116 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (375)
T cd05104         116 VITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYI  195 (375)
T ss_pred             eeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceec
Confidence            9999999999999885321                                                             


Q ss_pred             ------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc-----
Q 024659          149 ------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-----  211 (264)
Q Consensus       149 ------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~-----  211 (264)
                                  ...+++..+..++.||+.||.|||+. +++||||||+||+++.++.++|+|||++........     
T Consensus       196 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~  274 (375)
T cd05104         196 DQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK-NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKG  274 (375)
T ss_pred             ccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCchhhEEEECCCcEEEecCccceeccCcccccccC
Confidence                        12467888999999999999999999 999999999999999999999999999875543221     


Q ss_pred             -ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          212 -YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       212 -~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                       ..++..|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus       275 ~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~  320 (375)
T cd05104         275 NARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGM  320 (375)
T ss_pred             CCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCC
Confidence             223467999999998899999999999999999998 77777643

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=1.7e-37  Score=267.14  Aligned_cols=194  Identities=18%  Similarity=0.234  Sum_probs=165.6

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCC-----cceE
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ERLL  130 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~l  130 (264)
                      +++++.||+|+||.||++.+ .+++.||+|.+....  ......+.+|+++++.++|+||+++++++...+     ..++
T Consensus         2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l   81 (372)
T cd07853           2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYV   81 (372)
T ss_pred             CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEE
Confidence            56778889999999999995 568899999987542  233457889999999999999999999998766     6899


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-  209 (264)
                      |+||+.+ +|.+.+.  ....+++..+..++.||+.||.|||+. +++||||||+||+++.++.+||+|||++...... 
T Consensus        82 v~e~~~~-~l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~  157 (372)
T cd07853          82 VTELMQS-DLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSA-GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE  157 (372)
T ss_pred             Eeecccc-CHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChHHEEECCCCCEEeccccceeecccCc
Confidence            9999964 6888775  445789999999999999999999999 9999999999999999999999999998754322 


Q ss_pred             ----CcccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 ----RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ----~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                          ....++..|+|||++.+.. ++.++|||||||+++||++|+.||....
T Consensus       158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  209 (372)
T cd07853         158 SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQS  209 (372)
T ss_pred             cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCC
Confidence                2234678899999998754 7899999999999999999999997543

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-38  Score=273.72  Aligned_cols=195  Identities=22%  Similarity=0.256  Sum_probs=169.1

Q ss_pred             ccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeCC------cceEEEec
Q 024659           63 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD------ERLLVAEY  134 (264)
Q Consensus        63 ~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~  134 (264)
                      +.||+|+||.||+++ ...|+.||+|.++... ....+...+|+++|++++|+|||+++++-.+..      ...++|||
T Consensus        19 e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEy   98 (732)
T KOG4250|consen   19 ERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEY   98 (732)
T ss_pred             hhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEee
Confidence            356999999999999 7789999999998753 334566789999999999999999999865433      46799999


Q ss_pred             CCCCCHHHhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeC--CC--CCeEEcccCCCcccCCC
Q 024659          135 MPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD--DD--VNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~--~~--~~~kl~dfg~~~~~~~~  209 (264)
                      |.+|+|+..+++..+ .++++.+.+.++..+..||+|||++ ||+||||||.||++-  ++  -..||+|||.|+...+.
T Consensus        99 C~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn-~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~  177 (732)
T KOG4250|consen   99 CSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN-GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDN  177 (732)
T ss_pred             cCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCcEEEeecCCCceEEeeecccccccCCCC
Confidence            999999999987643 6899999999999999999999999 999999999999994  32  35899999999987765


Q ss_pred             C---cccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCCccc
Q 024659          210 R---SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS  258 (264)
Q Consensus       210 ~---~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~~~~  258 (264)
                      .   ...||..|.+||+... +.|+..+|.|||||++|+++||..||-++...
T Consensus       178 s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p  230 (732)
T KOG4250|consen  178 SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP  230 (732)
T ss_pred             CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc
Confidence            4   4578999999999985 77999999999999999999999999765543

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=3.3e-37  Score=253.56  Aligned_cols=196  Identities=17%  Similarity=0.187  Sum_probs=170.9

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      ..+|+++++||+|+||.||+|.. .+++.+|+|++..........+.+|+.++++++|+||+++++.+...+..++|+||
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~   87 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY   87 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence            45688899999999999999995 56889999999765544556688999999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----C
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R  210 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~  210 (264)
                      +++++|.+++.  ....+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++......    .
T Consensus        88 ~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~  164 (267)
T cd06646          88 CGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLAYLHSK-GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRK  164 (267)
T ss_pred             CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECCCCCEEECcCccceeecccccccC
Confidence            99999999885  345688999999999999999999999 9999999999999999999999999998754322    2


Q ss_pred             ccccccccccccccc---CCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          211 SYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~---~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      ...++..|+|||.+.   ...++.++|+||||++++||++|+.||..
T Consensus       165 ~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~  211 (267)
T cd06646         165 SFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFD  211 (267)
T ss_pred             ccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccc
Confidence            345678899999885   33478899999999999999999998853

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=3.3e-37  Score=255.16  Aligned_cols=198  Identities=24%  Similarity=0.376  Sum_probs=170.3

Q ss_pred             ccccccccCCCCCCCeEEEEEeC------CCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcce
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  129 (264)
                      ..|.+++.||+|+||.||++...      ++..||+|.+...... ..+.+.+|++++++++|+||+++++++......+
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            34678888999999999999853      2478999999876544 3467899999999999999999999999999999


Q ss_pred             EEEecCCCCCHHHhhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEE
Q 024659          130 LVAEYMPNDTLAKHLFHWE------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL  197 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl  197 (264)
                      ++|||+++++|.+++....            ...+++.++..++.|++.|+.+||++ +++|+||||+||+++.++.++|
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~-~i~h~dlkp~nili~~~~~~kl  163 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ-HFVHRDLATRNCLVGYDLVVKI  163 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC-CeeccccccceEEEcCCCeEEE
Confidence            9999999999999986421            23578889999999999999999999 9999999999999999999999


Q ss_pred             cccCCCcccCCC------CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          198 SCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       198 ~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      +|||++......      .....+..|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus       164 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~  228 (280)
T cd05049         164 GDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGL  228 (280)
T ss_pred             CCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCC
Confidence            999998754322      22234578999999998899999999999999999998 99888643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=3.8e-37  Score=251.88  Aligned_cols=195  Identities=26%  Similarity=0.401  Sum_probs=169.6

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      .++.+++.||+|+||.||++.+.++..+|+|.+.... .....+.+|+.++++++||||+++++++......+++|||+.
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS   82 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence            4578889999999999999998777779999987544 234668899999999999999999999988888999999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc-----
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-----  211 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~-----  211 (264)
                      +++|.+++.. ....+++.+++.++.|++.||.|||+. +++|+||+|+||+++.++.+||+|||.++.......     
T Consensus        83 ~~~l~~~i~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~  160 (256)
T cd05113          83 NGCLLNYLRE-HGKRFQPSQLLEMCKDVCEGMAYLESK-QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVG  160 (256)
T ss_pred             CCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCC
Confidence            9999999864 233689999999999999999999999 999999999999999999999999999875433221     


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPS  254 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~  254 (264)
                      ..++..|+|||++.+..++.++||||||+++|+|++ |..||..
T Consensus       161 ~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~  204 (256)
T cd05113         161 SKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYER  204 (256)
T ss_pred             CccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCc
Confidence            223467999999988889999999999999999998 8888754

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-38  Score=271.13  Aligned_cols=191  Identities=20%  Similarity=0.260  Sum_probs=171.3

Q ss_pred             cccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCCh---hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           60 NIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        60 ~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      .-+.+||-|+||.||-++ ..+.+.||+|++.-....   ...++.+|+..|++++|||++.+.|+|......|+|||||
T Consensus        29 ~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYC  108 (948)
T KOG0577|consen   29 SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYC  108 (948)
T ss_pred             HHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHH
Confidence            345678999999999999 456789999999754433   3567999999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCccccc
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN  215 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  215 (264)
                      -| |-.|++.- ..+++.+-.+..|+.+.+.||.|||+. +.||||||+.|||+++.|.+||+|||.|....+.+.+.||
T Consensus       109 lG-SAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLHS~-~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGT  185 (948)
T KOG0577|consen  109 LG-SASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSH-NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGT  185 (948)
T ss_pred             hc-cHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHHHh-hHHhhhccccceEecCCCeeeeccccchhhcCchhcccCC
Confidence            55 77777743 567899999999999999999999999 9999999999999999999999999999999999999999


Q ss_pred             cccccccccc---CCCCCCccceechHHHHHHHHhCCCCCC
Q 024659          216 LAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       216 ~~y~aPE~~~---~~~~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                      +.|||||++.   .+.|+.++||||||++..|+.-+++|..
T Consensus       186 PywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlF  226 (948)
T KOG0577|consen  186 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF  226 (948)
T ss_pred             ccccchhHheeccccccCCccceeeccchhhhhhhcCCCcc
Confidence            9999999984   5679999999999999999999998864

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7e-38  Score=265.44  Aligned_cols=189  Identities=19%  Similarity=0.209  Sum_probs=159.7

Q ss_pred             CCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC---hhHHHHHHHHHHHhcC---CCCCccccceeeEeCCcceEEEecCCC
Q 024659           65 HGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL---RNRRLANLLGCCCEGDERLLVAEYMPN  137 (264)
Q Consensus        65 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l---~h~~i~~~~~~~~~~~~~~lv~e~~~~  137 (264)
                      ||+|+||+||++.. .+++.||+|++.....   ........|..++..+   .||||+++++++...+..++||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            59999999999995 5688999999865321   1223344566666655   699999999999999999999999999


Q ss_pred             CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----CCccc
Q 024659          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYS  213 (264)
Q Consensus       138 ~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----~~~~~  213 (264)
                      ++|.+++.  ....+++..+..++.||+.||.|||++ +++||||||+||+++.++.++|+|||++.....    .....
T Consensus        81 g~L~~~l~--~~~~~~~~~~~~~~~qil~al~~LH~~-~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  157 (330)
T cd05586          81 GELFWHLQ--KEGRFSEDRAKFYIAELVLALEHLHKY-DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFC  157 (330)
T ss_pred             ChHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence            99998886  345689999999999999999999999 999999999999999999999999999875322    22346


Q ss_pred             ccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          214 TNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       214 ~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ++..|+|||++.+.. ++.++|||||||++|+|++|+.||....
T Consensus       158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~  201 (330)
T cd05586         158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED  201 (330)
T ss_pred             CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCC
Confidence            789999999997654 8999999999999999999999997654

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=4.6e-37  Score=254.90  Aligned_cols=199  Identities=23%  Similarity=0.381  Sum_probs=168.9

Q ss_pred             CccccccccCCCCCCCeEEEEEe-----CCCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcce
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  129 (264)
                      ++++++++.||+|+||.||+|..     ..+..+++|.+..... .....+.+|++++++++|+||+++++++......+
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~   83 (283)
T cd05090           4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC   83 (283)
T ss_pred             hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence            45678889999999999999984     2467899999975432 33456889999999999999999999999989999


Q ss_pred             EEEecCCCCCHHHhhhcCC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCC
Q 024659          130 LVAEYMPNDTLAKHLFHWE---------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN  194 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~---------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~  194 (264)
                      ++|||+++++|.+++....               ...+++.++..++.|++.||.|||++ +++|+||||+||++++++.
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~H~dlkp~nili~~~~~  162 (283)
T cd05090          84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH-FFVHKDLAARNILIGEQLH  162 (283)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc-CeehhccccceEEEcCCCc
Confidence            9999999999999885211               23477888999999999999999999 9999999999999999999


Q ss_pred             eEEcccCCCcccCCC------CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          195 PRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       195 ~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      ++|+|||+++.....      ....++..|+|||++.+..++.++|+||||++++||++ |..||...
T Consensus       163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~  230 (283)
T cd05090         163 VKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGF  230 (283)
T ss_pred             EEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCC
Confidence            999999998764322      12234567999999988889999999999999999998 88888654

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=5.9e-37  Score=250.28  Aligned_cols=197  Identities=20%  Similarity=0.258  Sum_probs=172.5

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCC--CChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      |.+.+.||+|++|.||++.. .+++.+++|.+...  .......+.+|++++++++|+||+++++++...+..++++||+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08529           2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYA   81 (256)
T ss_pred             ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeC
Confidence            55667789999999999995 56889999998753  2334567889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC----c
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S  211 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~----~  211 (264)
                      ++++|.+++.......+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.......    .
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~-~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~  160 (256)
T cd08529          82 ENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK-KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT  160 (256)
T ss_pred             CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhc
Confidence            999999999764456789999999999999999999999 99999999999999999999999999987654332    2


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ..++..|+|||+..+..++.++|+||||+++++|++|+.||....
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  205 (256)
T cd08529         161 IVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN  205 (256)
T ss_pred             cccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Confidence            356788999999998889999999999999999999999986543

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=4.1e-37  Score=259.24  Aligned_cols=197  Identities=20%  Similarity=0.287  Sum_probs=166.1

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCC----EEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQF----RIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      .+|++++.||+|+||.||+|.+ .++.    .||+|.+..... ...+++.+|+.+++.++|+||+++++++... ..++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            4477888899999999999985 3333    489999875432 3356788999999999999999999998764 5779


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~  210 (264)
                      +++|+++|+|.+++.. ....+++..++.++.||+.||.|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus        86 v~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~-~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~  163 (316)
T cd05108          86 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEER-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE  163 (316)
T ss_pred             eeecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHhc-CeeccccchhheEecCCCcEEEccccccccccCCC
Confidence            9999999999999864 344688899999999999999999999 99999999999999999999999999998654322


Q ss_pred             c------ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          211 S------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       211 ~------~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      .      ...+..|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus       164 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~  216 (316)
T cd05108         164 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP  216 (316)
T ss_pred             cceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC
Confidence            1      123567999999998889999999999999999997 888886543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=3.7e-37  Score=255.98  Aligned_cols=195  Identities=17%  Similarity=0.197  Sum_probs=162.8

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh--hHHHHHHHHHHHhcC---CCCCccccceeeEeC-----Cc
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQL---RNRRLANLLGCCCEG-----DE  127 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l---~h~~i~~~~~~~~~~-----~~  127 (264)
                      |++++.||+|+||.||++.+ .+++.||+|.+......  ....+.+|+++++.+   +|+||+++++++...     ..
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~   81 (288)
T cd07863           2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK   81 (288)
T ss_pred             ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence            67788899999999999995 56889999998754221  223455677666655   799999999988642     34


Q ss_pred             ceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      .++++||+.+ +|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++....
T Consensus        82 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~  159 (288)
T cd07863          82 VTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN-CIVHRDLKPENILVTSGGQVKLADFGLARIYS  159 (288)
T ss_pred             EEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEECccCcccccc
Confidence            7899999975 798888654455689999999999999999999999 99999999999999999999999999987654


Q ss_pred             CC---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          208 DG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       208 ~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..   ....++..|+|||++.+..++.++|||||||++|+|++|++||...
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~  210 (288)
T cd07863         160 CQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN  210 (288)
T ss_pred             CcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCC
Confidence            32   2345688899999999888999999999999999999999998654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=6e-37  Score=257.32  Aligned_cols=195  Identities=18%  Similarity=0.244  Sum_probs=170.0

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      .|++++.||+|+||.||++.. .++..+++|.+...... ....+.+|++++++++||||+++++.+..++..++++||+
T Consensus         2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~   81 (308)
T cd06615           2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM   81 (308)
T ss_pred             CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence            467888899999999999995 46788899998765322 3456889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC--CCccc
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSYS  213 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~--~~~~~  213 (264)
                      ++++|.+++..  ...+++..+..++.|++.||.|||+..+++|+||+|+||+++.++.++|+|||++.....  .....
T Consensus        82 ~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  159 (308)
T cd06615          82 DGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV  159 (308)
T ss_pred             CCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccccccCC
Confidence            99999999863  356889999999999999999999743899999999999999999999999999875433  23346


Q ss_pred             ccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       214 ~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      ++..|+|||.+.+..++.++|+||||+++++|++|+.||..
T Consensus       160 ~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~  200 (308)
T cd06615         160 GTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPP  200 (308)
T ss_pred             CCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence            78899999999888899999999999999999999999864

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=7.1e-37  Score=253.66  Aligned_cols=195  Identities=17%  Similarity=0.242  Sum_probs=170.0

Q ss_pred             ccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCC
Q 024659           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN  137 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  137 (264)
                      |+++++||+|+||.||++.+. ++..+++|.+........+.+.+|+++++.++|+|++++++.+...+..++++||+++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~   86 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   86 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence            567888999999999999965 5778899999776655667788999999999999999999999999999999999999


Q ss_pred             CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----CCccc
Q 024659          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYS  213 (264)
Q Consensus       138 ~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----~~~~~  213 (264)
                      ++|..++.. ...++++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.....    .....
T Consensus        87 ~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~-~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~  164 (282)
T cd06643          87 GAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHEN-KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI  164 (282)
T ss_pred             CcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCcccEEEccCCCEEEcccccccccccccccccccc
Confidence            999887753 345789999999999999999999999 999999999999999999999999999865432    23345


Q ss_pred             cccccccccccc-----CCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          214 TNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       214 ~~~~y~aPE~~~-----~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ++..|+|||++.     +..++.++|+|||||++|||++|++||...
T Consensus       165 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~  211 (282)
T cd06643         165 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHEL  211 (282)
T ss_pred             ccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCcccc
Confidence            788999999984     344788999999999999999999998654

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=8.9e-38  Score=277.46  Aligned_cols=197  Identities=16%  Similarity=0.147  Sum_probs=169.8

Q ss_pred             ccccccCCCCCCCeEEEEEeCCC-CEEEEEEeCCCCChhHHHHHHHHHHHhcCC-CCCccccce-eeEe---C---Ccce
Q 024659           59 ENIVSEHGEKAPNVVYKGKLENQ-FRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLG-CCCE---G---DERL  129 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~-~~~~---~---~~~~  129 (264)
                      .++.+-|.+|+|+.||++.+..+ ..+|+|++...+....+.+.+|++++++|+ |+|||.+++ ....   .   -.++
T Consensus        39 v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Evl  118 (738)
T KOG1989|consen   39 VTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVL  118 (738)
T ss_pred             EEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEE
Confidence            55667789999999999997665 999999999888777888999999999998 999999999 3322   1   2467


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~-~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      |.||||++++|-++++.+....|++..+++|+.|++.|+.+||.. ..|||||||.+||||+.++..||+|||.++....
T Consensus       119 lLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~  198 (738)
T KOG1989|consen  119 LLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKIL  198 (738)
T ss_pred             eehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccccC
Confidence            999999999999999866566699999999999999999999987 2499999999999999999999999999874322


Q ss_pred             CC-------------ccccccccccccccc---CCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          209 GR-------------SYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       209 ~~-------------~~~~~~~y~aPE~~~---~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..             ....|+.|+|||++.   +..+++|+|||+|||+||-|+++..||...
T Consensus       199 ~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~s  261 (738)
T KOG1989|consen  199 SPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEES  261 (738)
T ss_pred             CCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcC
Confidence            21             235689999999984   556999999999999999999999999865

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=3.9e-37  Score=253.12  Aligned_cols=195  Identities=16%  Similarity=0.187  Sum_probs=170.7

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      ..|.+++.||+|+||.||++.. .+++.+|+|.++.........+.+|+.+++.++||||+++++.+...+..++++||+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC   88 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence            3567778889999999999995 568899999998765555566888999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----Cc
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS  211 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~~  211 (264)
                      ++++|.+++.  ....+++.++..++.|++.|+.|||+. |++|+||+|+||+++.++.++|+|||++......    ..
T Consensus        89 ~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~  165 (267)
T cd06645          89 GGGSLQDIYH--VTGPLSESQIAYVSRETLQGLYYLHSK-GKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKS  165 (267)
T ss_pred             CCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEECcceeeeEccCccccccc
Confidence            9999999886  345689999999999999999999999 9999999999999999999999999998654322    33


Q ss_pred             cccccccccccccc---CCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          212 YSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       212 ~~~~~~y~aPE~~~---~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      ..++..|+|||++.   ...++.++|+|||||++|+|++|+.||..
T Consensus       166 ~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~  211 (267)
T cd06645         166 FIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFD  211 (267)
T ss_pred             ccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCccc
Confidence            46788999999974   44588899999999999999999998854

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=2.4e-37  Score=274.48  Aligned_cols=199  Identities=19%  Similarity=0.173  Sum_probs=169.7

Q ss_pred             ccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCC-------
Q 024659           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-------  126 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------  126 (264)
                      ..|.+.+.||+|+||+||++. ..+++.||+|.+....  ......+.+|+..+..++|+||+++...+....       
T Consensus        32 ~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~  111 (496)
T PTZ00283         32 KKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENV  111 (496)
T ss_pred             CCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccc
Confidence            467788889999999999998 4578999999997643  233456788999999999999999888765422       


Q ss_pred             -cceEEEecCCCCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCC
Q 024659          127 -ERLLVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (264)
Q Consensus       127 -~~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~  203 (264)
                       ..++||||+++++|.+++...  ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++
T Consensus       112 ~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~-~IiHrDLKP~NILl~~~~~vkL~DFGls  190 (496)
T PTZ00283        112 LMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK-HMIHRDIKSANILLCSNGLVKLGDFGFS  190 (496)
T ss_pred             eEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEeCCCCEEEEecccC
Confidence             267999999999999988642  245788999999999999999999999 9999999999999999999999999998


Q ss_pred             cccCC------CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          204 KNSRD------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       204 ~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      +....      .....+|+.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus       191 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~  249 (496)
T PTZ00283        191 KMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN  249 (496)
T ss_pred             eeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence            75432      233467899999999998889999999999999999999999997543

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=8.1e-37  Score=250.36  Aligned_cols=196  Identities=24%  Similarity=0.386  Sum_probs=170.3

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      +.|+++++||+|+||.||++...+++.+|+|.+..... ....+.+|+.++++++|+||+++++++. .+..++++||+.
T Consensus         6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~   83 (260)
T cd05067           6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYME   83 (260)
T ss_pred             HHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCC
Confidence            45788899999999999999988888999999986543 3467889999999999999999999864 567899999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC-----c
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S  211 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-----~  211 (264)
                      +++|.+++.......+++.++..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++.......     .
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~-~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~  162 (260)
T cd05067          84 NGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK-NYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREG  162 (260)
T ss_pred             CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccC
Confidence            99999998654556789999999999999999999999 99999999999999999999999999987654221     2


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      ..++..|+|||++....++.++||||||++++||++ |+.||...
T Consensus       163 ~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~  207 (260)
T cd05067         163 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGM  207 (260)
T ss_pred             CcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence            234568999999988889999999999999999999 89888644

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=6.6e-37  Score=253.56  Aligned_cols=190  Identities=17%  Similarity=0.217  Sum_probs=167.0

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      ++++++.||+|+||.||++.+ .+++.+|+|.+.... ......+.+|++++++++||||+++++.+...+..++++||+
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   81 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM   81 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence            356778899999999999994 568899999987553 233456889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--Cccc
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS  213 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--~~~~  213 (264)
                      ++++|..+.      .+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++......  ....
T Consensus        82 ~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~  154 (279)
T cd06619          82 DGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSL-KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYV  154 (279)
T ss_pred             CCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHC-CEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCC
Confidence            999886543      367888999999999999999999 9999999999999999999999999998754332  3346


Q ss_pred             ccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       214 ~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      ++..|+|||++.+..++.++|+||||+++|+|++|+.||..
T Consensus       155 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~  195 (279)
T cd06619         155 GTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQ  195 (279)
T ss_pred             CChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchh
Confidence            78899999999988899999999999999999999999864

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=5.9e-37  Score=254.11  Aligned_cols=198  Identities=26%  Similarity=0.437  Sum_probs=168.8

Q ss_pred             ccccccccCCCCCCCeEEEEEeCC------CCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcce
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  129 (264)
                      .++++++.||.|+||.||+|....      ...|++|.+...... ....+.+|++.+.+++|+||+++++++......+
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            457788899999999999998533      257999998755432 2456889999999999999999999999888899


Q ss_pred             EEEecCCCCCHHHhhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCe
Q 024659          130 LVAEYMPNDTLAKHLFHWET--------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP  195 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~--------------~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~  195 (264)
                      +++||+++++|.+++.....              ..+++..++.++.|++.||.|||++ +++|+||||+||++++++.+
T Consensus        85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~-~i~H~dlkp~Nil~~~~~~~  163 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH-HFVHRDLAARNCLVGEGLTV  163 (283)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccccceEEEcCCCcE
Confidence            99999999999999864311              4578889999999999999999999 99999999999999999999


Q ss_pred             EEcccCCCcccCCC------CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          196 RLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       196 kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      +|+|||++......      ....++..|+|||.+.+..++.++||||||+++|||++ |..||...
T Consensus       164 ~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~  230 (283)
T cd05048         164 KISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGF  230 (283)
T ss_pred             EECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCC
Confidence            99999998754322      12344678999999988889999999999999999998 99888653

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=6.2e-37  Score=268.61  Aligned_cols=194  Identities=20%  Similarity=0.258  Sum_probs=161.2

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeC--------Cc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG--------DE  127 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------~~  127 (264)
                      ..|.+++.||+|+||.||+|.. ..++.||+|++....    ....+|+.+++.++|+||+++++++...        ..
T Consensus        66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~  141 (440)
T PTZ00036         66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIF  141 (440)
T ss_pred             CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceE
Confidence            4588888999999999999995 568899999986533    2345799999999999999999886432        13


Q ss_pred             ceEEEecCCCCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC-CCeEEcccCCCc
Q 024659          128 RLLVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMK  204 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~-~~~kl~dfg~~~  204 (264)
                      +++||||+++ +|.+++...  ....+++..+..++.||+.||.|||+. +|+||||||+||+++.+ +.+||+|||+++
T Consensus       142 l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~-~IiHrDLKp~NILl~~~~~~vkL~DFGla~  219 (440)
T PTZ00036        142 LNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK-FICHRDLKPQNLLIDPNTHTLKLCDFGSAK  219 (440)
T ss_pred             EEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCcCHHHEEEcCCCCceeeeccccch
Confidence            6689999975 687766432  345789999999999999999999999 99999999999999966 579999999998


Q ss_pred             ccCCC---CcccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          205 NSRDG---RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       205 ~~~~~---~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .....   ....+++.|+|||++.+. .++.++|||||||++|||++|.+||....
T Consensus       220 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~  275 (440)
T PTZ00036        220 NLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQS  275 (440)
T ss_pred             hccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            65432   234678899999998765 58999999999999999999999997643

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=4.6e-38  Score=257.85  Aligned_cols=195  Identities=31%  Similarity=0.497  Sum_probs=165.0

Q ss_pred             cccccCCCCCCCeEEEEEeC-----CCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           60 NIVSEHGEKAPNVVYKGKLE-----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        60 ~~l~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      ++.+.||.|+||.||+|.+.     .+..|++|.+...... ..+.+.+|++.+++++||||+++++++...+..++|+|
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e   81 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME   81 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence            35567899999999999966     3678999999764333 36789999999999999999999999998788999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----  209 (264)
                      |+++++|.+++.......+++.++..|+.||+.||.|||++ +++|+||+++||++++++.+||+|||++......    
T Consensus        82 ~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~-~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~  160 (259)
T PF07714_consen   82 YCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN-NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYK  160 (259)
T ss_dssp             --TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT-TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEE
T ss_pred             ccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccc
Confidence            99999999999875467899999999999999999999999 9999999999999999999999999998866221    


Q ss_pred             --CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                        ........|+|||.+.+..++.++||||||+++|||++ |+.|+...
T Consensus       161 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~  209 (259)
T PF07714_consen  161 NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY  209 (259)
T ss_dssp             ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence              22345678999999998889999999999999999999 56776544

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.7e-37  Score=254.41  Aligned_cols=199  Identities=17%  Similarity=0.235  Sum_probs=173.8

Q ss_pred             CCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      ..+.|+++++||.|+||.||++.. .++..+|+|.+........+.+.+|++++++++|+||+++++.+..+...++|||
T Consensus         3 ~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (280)
T cd06611           3 PNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE   82 (280)
T ss_pred             chhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence            345688999999999999999995 4688999999987665566778899999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----  209 (264)
                      |+++++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......    
T Consensus        83 ~~~~~~L~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~  160 (280)
T cd06611          83 FCDGGALDSIMLE-LERGLTEPQIRYVCRQMLEALNFLHSH-KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKR  160 (280)
T ss_pred             ccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEECCCCCEEEccCccchhhccccccc
Confidence            9999999998864 345789999999999999999999999 9999999999999999999999999987654322    


Q ss_pred             Cccccccccccccccc-----CCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 RSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~-----~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ....++..|+|||.+.     ...++.++|+||||+++|+|++|+.||...
T Consensus       161 ~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~  211 (280)
T cd06611         161 DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHEL  211 (280)
T ss_pred             ceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccC
Confidence            2235678899999975     334788999999999999999999998653

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=5.5e-37  Score=262.85  Aligned_cols=195  Identities=17%  Similarity=0.216  Sum_probs=165.9

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCC------
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD------  126 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------  126 (264)
                      ...|++++.||+|+||.||++.+ ..++.||+|.+....  ......+.+|+.+++.++|+||+++++++....      
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   99 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ   99 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence            45688889999999999999995 558899999997542  233456789999999999999999999986543      


Q ss_pred             cceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCccc
Q 024659          127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (264)
Q Consensus       127 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~  206 (264)
                      ..++||||+.+ +|.+.+.    ..++...+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++...
T Consensus       100 ~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~-~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~  173 (359)
T cd07876         100 DVYLVMELMDA-NLCQVIH----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTA  173 (359)
T ss_pred             eeEEEEeCCCc-CHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCCCEEEecCCCcccc
Confidence            46899999976 5766653    2478888999999999999999999 9999999999999999999999999998754


Q ss_pred             CCC---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       207 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ...   ....++..|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus       174 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~  226 (359)
T cd07876         174 CTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTD  226 (359)
T ss_pred             ccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence            332   23467889999999998889999999999999999999999997543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=8.8e-37  Score=254.96  Aligned_cols=201  Identities=18%  Similarity=0.275  Sum_probs=176.3

Q ss_pred             HHhCCCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcce
Q 024659           51 TATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        51 ~~~~~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  129 (264)
                      ........|++++.||.|++|.||++.. .+++.|++|.+........+.+.+|+.+++.++|+||+++++.+...+..+
T Consensus        13 ~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   92 (296)
T cd06655          13 SIGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELF   92 (296)
T ss_pred             hcCCCcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEE
Confidence            3334445688889999999999999984 668899999998665555677889999999999999999999999999999


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~  209 (264)
                      +|+||+++++|..++.   ...+++.++..++.|++.|+.+||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus        93 lv~e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~-~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~  168 (296)
T cd06655          93 VVMEYLAGGSLTDVVT---ETCMDEAQIAAVCRECLQALEFLHAN-QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPE  168 (296)
T ss_pred             EEEEecCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEccCccchhcccc
Confidence            9999999999999884   34589999999999999999999999 9999999999999999999999999988754332


Q ss_pred             C----cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 R----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 ~----~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      .    ...++..|+|||.+.+..++.++|+||||+++|+|++|+.||...
T Consensus       169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~  218 (296)
T cd06655         169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNE  218 (296)
T ss_pred             cccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            2    235678899999999888999999999999999999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=6.9e-37  Score=250.26  Aligned_cols=196  Identities=27%  Similarity=0.397  Sum_probs=168.1

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      .++.+.+.||+|+||.||++.+.++..+|+|.+..... ....+.+|++++++++|+||+++++++...+..++++||++
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA   82 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence            34667788899999999999987777899999875432 33567889999999999999999999988889999999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc-----
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-----  211 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~-----  211 (264)
                      +++|.+++.. ....+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||+++.......     
T Consensus        83 ~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~  160 (256)
T cd05059          83 NGCLLNYLRE-RKGKLGTEWLLDMCSDVCEAMEYLESN-GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQG  160 (256)
T ss_pred             CCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC-CcccccccHhhEEECCCCcEEECCcccceecccccccccCC
Confidence            9999999864 234688999999999999999999999 999999999999999999999999999876543221     


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      ...+..|+|||.+.+..++.++|+||||+++|+|++ |..||...
T Consensus       161 ~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~  205 (256)
T cd05059         161 TKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERF  205 (256)
T ss_pred             CCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCC
Confidence            122357999999998889999999999999999999 77777543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=7.3e-37  Score=260.52  Aligned_cols=195  Identities=21%  Similarity=0.291  Sum_probs=166.0

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeC------C
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG------D  126 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~  126 (264)
                      .+.|.+++.||.|+||.||++.+ .+++.||+|.+.....  .....+.+|++++++++|+||+++++++...      .
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07878          14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN   93 (343)
T ss_pred             hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence            35678889999999999999995 5678999999975432  2345677899999999999999999987543      3


Q ss_pred             cceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCccc
Q 024659          127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (264)
Q Consensus       127 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~  206 (264)
                      ..+++++++ +++|.+++.   ...+++..+..++.||+.||.|||++ +++||||||+||++++++.+||+|||++...
T Consensus        94 ~~~~~~~~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~  168 (343)
T cd07878          94 EVYLVTNLM-GADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSA-GIIHRDLKPSNVAVNEDCELRILDFGLARQA  168 (343)
T ss_pred             cEEEEeecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CeecccCChhhEEECCCCCEEEcCCccceec
Confidence            468899987 678988874   34689999999999999999999999 9999999999999999999999999998865


Q ss_pred             CCC-CcccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          207 RDG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       207 ~~~-~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ... ....++..|+|||++.+ ..++.++|||||||++|+|++|+.||...
T Consensus       169 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  219 (343)
T cd07878         169 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGN  219 (343)
T ss_pred             CCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence            433 33467899999999977 45899999999999999999999999754

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=9.2e-37  Score=250.44  Aligned_cols=197  Identities=24%  Similarity=0.370  Sum_probs=168.0

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      ..|++.++||+|+||.||+|.+.+...||+|.+..... ..+.+.+|++++++++|+||+++++.+. ....+++|||++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~   83 (262)
T cd05071           6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMS   83 (262)
T ss_pred             HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCC
Confidence            34788899999999999999977766899999986432 3456889999999999999999999874 456899999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC-----c
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S  211 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-----~  211 (264)
                      +++|.+++.......+++..+..++.|++.||.+||+. +++|+||+|+||++++++.++|+|||.+.......     .
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~  162 (262)
T cd05071          84 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG  162 (262)
T ss_pred             CCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC-CccccccCcccEEEcCCCcEEeccCCceeeccccccccccC
Confidence            99999999753445678999999999999999999999 99999999999999999999999999987544322     1


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ..++..|+|||+..+..++.++|+||||+++|+|++ |..||....
T Consensus       163 ~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~  208 (262)
T cd05071         163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV  208 (262)
T ss_pred             CcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence            234567999999988889999999999999999999 777776543

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-38  Score=274.17  Aligned_cols=196  Identities=17%  Similarity=0.232  Sum_probs=175.8

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      -+-+++|++||.|+||.||++.. +.+...|-|++...+.+..+++.-|+++|..++||+|+++++.|...+.+||..||
T Consensus        31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF  110 (1187)
T KOG0579|consen   31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF  110 (1187)
T ss_pred             HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence            34478999999999999999994 44555678999888888899999999999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC----CCC
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR----DGR  210 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~----~~~  210 (264)
                      |+||.++.++.. -++.+++.++..++.|++.||.|||++ +|+|||||+.|||+.-+|.++|+|||.+....    ...
T Consensus       111 C~GGAVDaimlE-L~r~LtE~QIqvvc~q~ldALn~LHs~-~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRD  188 (1187)
T KOG0579|consen  111 CGGGAVDAIMLE-LGRVLTEDQIQVVCYQVLDALNWLHSQ-NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRD  188 (1187)
T ss_pred             cCCchHhHHHHH-hccccchHHHHHHHHHHHHHHHHHhhc-chhhhhccccceEEEecCcEeeecccccccchhHHhhhc
Confidence            999999887765 578899999999999999999999999 99999999999999999999999999865433    346


Q ss_pred             cccccccccccccc-----cCCCCCCccceechHHHHHHHHhCCCCCC
Q 024659          211 SYSTNLAFTPPEYL-----RTGRVTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       211 ~~~~~~~y~aPE~~-----~~~~~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                      .+.||+.|||||+.     .+.+|++++||||||++|.||..+.+|..
T Consensus       189 sFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHh  236 (1187)
T KOG0579|consen  189 SFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHH  236 (1187)
T ss_pred             cccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcc
Confidence            78999999999976     45679999999999999999999998865

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=1.1e-36  Score=249.57  Aligned_cols=196  Identities=25%  Similarity=0.394  Sum_probs=169.0

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      ++++++++||+|+||.||++...++..+|+|.+..... ..+.+.+|+.++++++|+|++++++++. ....+++|||++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~   83 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS   83 (260)
T ss_pred             HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence            35778889999999999999988888899999986543 3456889999999999999999999875 456899999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC-----c
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S  211 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-----~  211 (264)
                      +++|.+++.......+++.++..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++.......     .
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~  162 (260)
T cd05070          84 KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM-NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQG  162 (260)
T ss_pred             CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccC
Confidence            99999998654455689999999999999999999999 99999999999999999999999999987644322     1


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      ..++..|+|||.+.+..++.++|+||||+++++|++ |..||...
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~  207 (260)
T cd05070         163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGM  207 (260)
T ss_pred             CCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCC
Confidence            223467999999988889999999999999999999 78888653

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=6.8e-37  Score=256.14  Aligned_cols=199  Identities=18%  Similarity=0.280  Sum_probs=169.9

Q ss_pred             CCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      .++.|.++++||.|+||.||++.+ .+++.||+|.+..... .....+.+|+.++++++|+||+++++++...+..++|+
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~   83 (301)
T cd07873           4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF   83 (301)
T ss_pred             cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence            356788999999999999999995 4678999999875432 22345778999999999999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---  209 (264)
                      ||+++ +|.+++.. ....+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++......   
T Consensus        84 e~~~~-~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~  160 (301)
T cd07873          84 EYLDK-DLKQYLDD-CGNSINMHNVKLFLFQLLRGLNYCHRR-KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT  160 (301)
T ss_pred             ecccc-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCc
Confidence            99974 89888864 345688999999999999999999999 9999999999999999999999999998754322   


Q ss_pred             -CcccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 -RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 -~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                       ....++..|+|||++.+. .++.++||||||+++|+|++|++||....
T Consensus       161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~  209 (301)
T cd07873         161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGST  209 (301)
T ss_pred             ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence             223457889999998754 47889999999999999999999997543

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=8.8e-37  Score=264.40  Aligned_cols=190  Identities=17%  Similarity=0.183  Sum_probs=166.0

Q ss_pred             cccccccCCCCCCCeEEEEEeC---CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      .|++++.||.|+||.||++...   .+..|++|.+....     ...+|++++++++|+||+++++++......+++||+
T Consensus        93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~-----~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~  167 (392)
T PHA03207         93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK-----TPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPK  167 (392)
T ss_pred             ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc-----cHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehh
Confidence            4889999999999999999753   35788999886532     345799999999999999999999998999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC----
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----  210 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~----  210 (264)
                      +. ++|.+++.  ....+++..++.++.||+.||.|||++ +++||||||+||+++.++.++|+|||++.......    
T Consensus       168 ~~-~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~-givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~  243 (392)
T PHA03207        168 YK-CDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGR-GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQ  243 (392)
T ss_pred             cC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEcCCCCEEEccCccccccCccccccc
Confidence            85 57888884  456789999999999999999999999 99999999999999999999999999987543321    


Q ss_pred             --cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 --SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 --~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                        ...+|..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       244 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~  291 (392)
T PHA03207        244 CYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQ  291 (392)
T ss_pred             ccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence              3467899999999998889999999999999999999999997543

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=8.7e-37  Score=252.95  Aligned_cols=198  Identities=23%  Similarity=0.342  Sum_probs=169.7

Q ss_pred             CccccccccCCCCCCCeEEEEEeC------CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcce
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  129 (264)
                      +.++.+.++||+|+||.||++...      ++..+++|.+..........+.+|+++++.++|+||+++++++......+
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (280)
T cd05092           4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL   83 (280)
T ss_pred             hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence            445677889999999999999632      35688999988766556678999999999999999999999999888999


Q ss_pred             EEEecCCCCCHHHhhhcCCC-------------CCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeE
Q 024659          130 LVAEYMPNDTLAKHLFHWET-------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPR  196 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~-------------~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~k  196 (264)
                      +++||+++++|.+++.....             ..+++.++..++.|++.|+.|||+. +++|+||||+||++++++.++
T Consensus        84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-~i~H~dlkp~nil~~~~~~~k  162 (280)
T cd05092          84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL-HFVHRDLATRNCLVGQGLVVK  162 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC-CeecccccHhhEEEcCCCCEE
Confidence            99999999999999864221             2478899999999999999999999 999999999999999999999


Q ss_pred             EcccCCCcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCC
Q 024659          197 LSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPS  254 (264)
Q Consensus       197 l~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~  254 (264)
                      |+|||++.......      ...++..|+|||.+.+..++.++||||||+++|||++ |.+||..
T Consensus       163 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~  227 (280)
T cd05092         163 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQ  227 (280)
T ss_pred             ECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCcc
Confidence            99999987543221      2233578999999998889999999999999999998 8888754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=8e-37  Score=262.30  Aligned_cols=195  Identities=15%  Similarity=0.216  Sum_probs=166.5

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeC------C
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG------D  126 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~  126 (264)
                      ...|.+++.||+|+||.||++.+ ..++.||+|++....  ......+.+|+.+++.++|+||+++++++...      .
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~  102 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  102 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence            35678888999999999999995 458899999997542  23345678899999999999999999987543      3


Q ss_pred             cceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCccc
Q 024659          127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (264)
Q Consensus       127 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~  206 (264)
                      ..++||||+++ +|.+.+.    ..+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||+++..
T Consensus       103 ~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~  176 (364)
T cd07875         103 DVYIVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTA  176 (364)
T ss_pred             eEEEEEeCCCC-CHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhC-CeecCCCCHHHEEECCCCcEEEEeCCCcccc
Confidence            46999999966 6877764    2478889999999999999999999 9999999999999999999999999999765


Q ss_pred             CCC---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       207 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ...   ....++..|+|||++.+..++.++|||||||++|+|++|+.||....
T Consensus       177 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~  229 (364)
T cd07875         177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD  229 (364)
T ss_pred             CCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCC
Confidence            432   23467899999999999899999999999999999999999997543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.7e-36  Score=259.54  Aligned_cols=187  Identities=14%  Similarity=0.170  Sum_probs=161.9

Q ss_pred             cccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      .|++++.||+|+||.||++... .+..||+|......      ...|+.++++++|+||+++++++......++|+|++.
T Consensus        67 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~------~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  140 (357)
T PHA03209         67 GYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT------TLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS  140 (357)
T ss_pred             CcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc------cHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC
Confidence            4788899999999999999954 57789999754432      3468999999999999999999999999999999995


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---Cccc
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYS  213 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---~~~~  213 (264)
                       ++|.+++.. ....+++..+..++.||+.||.|||+. +++||||||+||+++.++.++|+|||++......   ....
T Consensus       141 -~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~  217 (357)
T PHA03209        141 -SDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQ-RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLA  217 (357)
T ss_pred             -CcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEEecCccccccccCccccccc
Confidence             578888754 445789999999999999999999999 9999999999999999999999999998754322   2346


Q ss_pred             ccccccccccccCCCCCCccceechHHHHHHHHhCCCCCC
Q 024659          214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       214 ~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                      ++..|+|||++.+..++.++|||||||++|||+++..++.
T Consensus       218 gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f  257 (357)
T PHA03209        218 GTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIF  257 (357)
T ss_pred             ccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccc
Confidence            7899999999998889999999999999999998765553

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=1.1e-36  Score=248.80  Aligned_cols=197  Identities=16%  Similarity=0.185  Sum_probs=172.7

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      |++++.||.|+||.||++.. .+++.+|+|.++... ....+.+.+|+.+++.++|+||+++++.+.+.+..++++||++
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   81 (255)
T cd08219           2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCD   81 (255)
T ss_pred             ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCC
Confidence            56778899999999999995 468899999986532 3345678889999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----Ccc
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSY  212 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~~~  212 (264)
                      +++|.+++.......++...+..++.|++.||.+||++ +++|+||+|+||++++++.++++|||++......    ...
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~  160 (255)
T cd08219          82 GGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK-RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTY  160 (255)
T ss_pred             CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCcceEEECCCCcEEEcccCcceeecccccccccc
Confidence            99999988654556688999999999999999999999 9999999999999999999999999998755432    234


Q ss_pred             cccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       213 ~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .++..|+|||++.+..++.++|+||||+++++|++|+.||....
T Consensus       161 ~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~  204 (255)
T cd08219         161 VGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS  204 (255)
T ss_pred             cCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCC
Confidence            57788999999988889999999999999999999999997543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=1.6e-36  Score=249.02  Aligned_cols=189  Identities=19%  Similarity=0.323  Sum_probs=161.0

Q ss_pred             cCCCCCCCeEEEEEeCC-------------CCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           64 EHGEKAPNVVYKGKLEN-------------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      .||+|+||.||+|....             ...+++|.+..........+.+|+.+++.++||||+++++++......++
T Consensus         2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l   81 (262)
T cd05077           2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM   81 (262)
T ss_pred             ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence            57999999999998532             23588998876654455678889999999999999999999998889999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCC-------eEEcccCCC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN-------PRLSCFGLM  203 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~-------~kl~dfg~~  203 (264)
                      ++||+++++|..++.. ....+++..++.++.||+.||.|||++ +++||||||+||+++.++.       ++++|||++
T Consensus        82 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~  159 (262)
T cd05077          82 VEEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDK-DLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIP  159 (262)
T ss_pred             EEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhC-CeECCCCCcccEEEecCCccCCCCceeEeCCCCCC
Confidence            9999999999988753 345689999999999999999999999 9999999999999986654       899999998


Q ss_pred             cccCCCCccccccccccccccc-CCCCCCccceechHHHHHHHH-hCCCCCCC
Q 024659          204 KNSRDGRSYSTNLAFTPPEYLR-TGRVTPESVMYSFGTLLLDLL-SGKHIPPS  254 (264)
Q Consensus       204 ~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~DiwslG~~l~el~-~g~~~~~~  254 (264)
                      ..........++..|+|||.+. +..++.++||||||+++|||+ +|..|+..
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~  212 (262)
T cd05077         160 ITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKD  212 (262)
T ss_pred             ccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence            7665555566788899999887 456899999999999999998 46776654

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-36  Score=249.20  Aligned_cols=194  Identities=19%  Similarity=0.231  Sum_probs=167.8

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC-----hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-----PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      |.+.+.||.|++|.||++.. .+++.+++|.+.....     .....+.+|++++++++|+||+++++++...+..++++
T Consensus         4 ~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~   83 (263)
T cd06625           4 WRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFM   83 (263)
T ss_pred             ccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEE
Confidence            45566779999999999995 5688999999875421     12346788999999999999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---  209 (264)
                      ||+++++|.+.+..  ...++...+..++.|++.||.+||+. +++|+||+|+||++++++.++|+|||++......   
T Consensus        84 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~  160 (263)
T cd06625          84 EYMPGGSVKDQLKA--YGALTETVTRKYTRQILEGVEYLHSN-MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSS  160 (263)
T ss_pred             EECCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeecccceeccccccc
Confidence            99999999998863  45688899999999999999999999 9999999999999999999999999998754321   


Q ss_pred             ----CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 ----~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                          ....++..|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~  210 (263)
T cd06625         161 GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEF  210 (263)
T ss_pred             cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCcccc
Confidence                2234667899999999888999999999999999999999998653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-36  Score=247.59  Aligned_cols=197  Identities=15%  Similarity=0.185  Sum_probs=173.4

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      +.|++.+.+|.|+||.||++.. .+++.+++|.+........+.+.+|++++++++|+||+++++.+...+..+++|||+
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~   82 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC   82 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence            3467788899999999999995 457889999998766556678999999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----Cc
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS  211 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~~  211 (264)
                      ++++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++......    ..
T Consensus        83 ~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~  160 (262)
T cd06613          83 GGGSLQDIYQV-TRGPLSELQIAYVCRETLKGLAYLHET-GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKS  160 (262)
T ss_pred             CCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCChhhEEECCCCCEEECccccchhhhhhhhcccc
Confidence            99999998864 335789999999999999999999999 9999999999999999999999999998754432    23


Q ss_pred             ccccccccccccccCC---CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTG---RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~---~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..++..|+|||.+...   .++.++|+||||+++++|++|+.||...
T Consensus       161 ~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~  207 (262)
T cd06613         161 FIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDL  207 (262)
T ss_pred             ccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence            4567889999999776   7899999999999999999999998654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=1.7e-36  Score=252.17  Aligned_cols=197  Identities=23%  Similarity=0.367  Sum_probs=168.8

Q ss_pred             cccccccCCCCCCCeEEEEEe------CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           58 MENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      .+.+.+.+|+|+||.||++..      .++..+|+|.+..........+.+|++++++++|+||+++++++...+..+++
T Consensus         6 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   85 (288)
T cd05093           6 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV   85 (288)
T ss_pred             HeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            466778889999999999984      23567899998876555566789999999999999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCC-----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEccc
Q 024659          132 AEYMPNDTLAKHLFHWE-----------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF  200 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~-----------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~df  200 (264)
                      +||+++++|.+++....           ...+++.++..++.|++.||.|||+. +++||||||+||++++++.++|+||
T Consensus        86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~-~i~H~dlkp~Nili~~~~~~kl~df  164 (288)
T cd05093          86 FEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNCLVGENLLVKIGDF  164 (288)
T ss_pred             EEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccCcceEEEccCCcEEeccC
Confidence            99999999999986321           13489999999999999999999999 9999999999999999999999999


Q ss_pred             CCCcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          201 GLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       201 g~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      |++.......      ...++..|+|||++.+..++.++|+||||+++++|++ |..||...
T Consensus       165 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~  226 (288)
T cd05093         165 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL  226 (288)
T ss_pred             CccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            9987543321      2233568999999998889999999999999999998 88887643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-36  Score=255.75  Aligned_cols=198  Identities=20%  Similarity=0.213  Sum_probs=172.3

Q ss_pred             cccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCCh---hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      .|++++.||.|++|.||++... +++.+|+|.+......   ..+.+.+|+++++.++|+||+++++.+......++|+|
T Consensus         2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   81 (316)
T cd05574           2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD   81 (316)
T ss_pred             ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence            4677788899999999999965 4889999999865433   34568889999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----  209 (264)
                      |+.+++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++......    
T Consensus        82 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~  160 (316)
T cd05574          82 YCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL-GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV  160 (316)
T ss_pred             ecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC-CeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence            99999999998754456789999999999999999999999 9999999999999999999999999987643211    


Q ss_pred             -----------------------------CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 -----------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 -----------------------------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                                                   ....++..|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~  236 (316)
T cd05574         161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN  236 (316)
T ss_pred             ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence                                         12246778999999998889999999999999999999999996543

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=1.3e-36  Score=253.06  Aligned_cols=196  Identities=20%  Similarity=0.272  Sum_probs=172.1

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      .|++++.||.|+||.||++.. .+++.+|+|.+....   ....+.+.+|++++++++|+||+++++++...+..++|+|
T Consensus         2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   81 (290)
T cd05580           2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME   81 (290)
T ss_pred             ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence            467888899999999999995 468899999987532   2234568889999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-Ccc
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY  212 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-~~~  212 (264)
                      |+++++|.+++..  ...++...+..++.|++.||.+||+. +++|+||+|+||+++.++.++|+|||++...... ...
T Consensus        82 ~~~~~~L~~~~~~--~~~l~~~~~~~~~~qil~~l~~lH~~-~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~  158 (290)
T cd05580          82 YVPGGELFSHLRK--SGRFPEPVARFYAAQVVLALEYLHSL-DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTL  158 (290)
T ss_pred             cCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCC
Confidence            9999999999863  35789999999999999999999999 9999999999999999999999999998765443 234


Q ss_pred             cccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       213 ~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .++..|+|||.+.+..++.++|+||||+++++|++|+.||....
T Consensus       159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  202 (290)
T cd05580         159 CGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN  202 (290)
T ss_pred             CCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence            57789999999988888999999999999999999999986543

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=1.8e-36  Score=249.04  Aligned_cols=199  Identities=16%  Similarity=0.173  Sum_probs=171.4

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      +.|++.+.||.|+||.||+++. .+++.||+|.+....   ......+.+|+++++.++||||+++++++...+..++++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            3567888899999999999994 568899999886432   223446788999999999999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC
Q 024659          133 EYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (264)
Q Consensus       133 e~~~~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~  210 (264)
                      ||+++++|.+++...  ....++...+..++.|++.||.|||++ +++|+||+|+||+++.++.++|+|||++.......
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~  160 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT  160 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCCHHHEEEcCCCCEEECccccceeccchh
Confidence            999999999888532  234578899999999999999999999 99999999999999999999999999987654322


Q ss_pred             ----cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 ----~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                          ...++..|+|||.+.+..++.++|+||||+++|||++|+.||....
T Consensus       161 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~  210 (267)
T cd08228         161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK  210 (267)
T ss_pred             HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccc
Confidence                3457788999999988889999999999999999999999986543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=1.6e-36  Score=255.59  Aligned_cols=191  Identities=15%  Similarity=0.222  Sum_probs=157.6

Q ss_pred             ccCCCCCCCeEEEEEeC---CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEe--CCcceEEEecCCC
Q 024659           63 SEHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLLVAEYMPN  137 (264)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~  137 (264)
                      .+||+|+||.||++...   +++.+|+|.+.....  ...+.+|++++++++||||+++++++..  ....++++||+.+
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~   84 (317)
T cd07868           7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH   84 (317)
T ss_pred             cccccCCCeEEEEEEEccCCCCceEEEEEECCCCC--cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC
Confidence            46899999999999854   467899999975432  3457789999999999999999999854  3467899999855


Q ss_pred             CCHHHhhhcC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeee----CCCCCeEEcccCCCccc
Q 024659          138 DTLAKHLFHW-------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF----DDDVNPRLSCFGLMKNS  206 (264)
Q Consensus       138 ~sL~~~l~~~-------~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~----~~~~~~kl~dfg~~~~~  206 (264)
                       +|.+++...       ....+++..+..++.||+.||.|||++ +++||||||+||++    +.++.+||+|||++...
T Consensus        85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~  162 (317)
T cd07868          85 -DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIADMGFARLF  162 (317)
T ss_pred             -CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC-CEEcCCCCHHHEEEecCCCCcCcEEEeecCceecc
Confidence             788877421       123578899999999999999999999 99999999999999    45678999999999764


Q ss_pred             CCC-------CcccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          207 RDG-------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       207 ~~~-------~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                      ...       ....+|+.|+|||++.+. .++.++||||+||++++|++|++||.....
T Consensus       163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~  221 (317)
T cd07868         163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE  221 (317)
T ss_pred             CCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcc
Confidence            322       234568899999999875 489999999999999999999999975443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.9e-38  Score=260.53  Aligned_cols=199  Identities=19%  Similarity=0.246  Sum_probs=175.6

Q ss_pred             CCCccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCC---hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcce
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  129 (264)
                      +.|..++++   |.|+||.|+-+. ...|+.+|+|++.+...   .......+|-++|.++..+.||.+--.|.+.+.++
T Consensus       185 n~F~~~Rvl---GkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LC  261 (591)
T KOG0986|consen  185 NTFRVYRVL---GKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALC  261 (591)
T ss_pred             cceeeeEEE---ecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceE
Confidence            446667776   999999999998 56689999988864321   12234678999999999999999999999999999


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~  209 (264)
                      +|+..+.||+|.-.|.+..+..++++.++.++.+|+.||.+||+. +||+||+||+|||+|++|.++|+|+|+|..+..+
T Consensus       262 lVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~-~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g  340 (591)
T KOG0986|consen  262 LVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR-RIVYRDLKPENILLDDHGHVRISDLGLAVEIPEG  340 (591)
T ss_pred             EEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc-ceeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence            999999999999888876677899999999999999999999999 9999999999999999999999999999877655


Q ss_pred             C---cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 R---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ~---~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .   ...||.+|||||++.+..|+...|+|||||+||||+.|+.||..+-
T Consensus       341 ~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~K  390 (591)
T KOG0986|consen  341 KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRK  390 (591)
T ss_pred             CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhh
Confidence            3   3478999999999999999999999999999999999999997543

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.3e-36  Score=247.64  Aligned_cols=198  Identities=26%  Similarity=0.418  Sum_probs=172.4

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      +.+.+.+.||.|+||.||++.+.+++.+++|.+.... ....++.+|+.++++++|+||+++++++......++++||++
T Consensus         6 ~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   84 (261)
T cd05034           6 ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMS   84 (261)
T ss_pred             hheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccC
Confidence            4567788899999999999998787889999998654 235678899999999999999999999988888999999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC-----c
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S  211 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-----~  211 (264)
                      +++|.+++.......+++.++..++.|++.|+.|||++ +++|+||+|+||+++.++.++|+|||++.......     .
T Consensus        85 ~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~-~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~  163 (261)
T cd05034          85 KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR-NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREG  163 (261)
T ss_pred             CCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcchheEEEcCCCCEEECccccceeccchhhhhhhc
Confidence            99999999754446789999999999999999999999 99999999999999999999999999987654221     1


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ...+..|+|||.+.+..++.++|+||||++++++++ |+.||....
T Consensus       164 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~  209 (261)
T cd05034         164 AKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT  209 (261)
T ss_pred             cCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            223467999999998889999999999999999998 888886543

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=1.3e-36  Score=263.10  Aligned_cols=198  Identities=21%  Similarity=0.305  Sum_probs=166.3

Q ss_pred             ccccccccCCCCCCCeEEEEEeCC------CCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCC-CCCccccceeeEeCCcc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWP-DARQFLEEARAVGQLR-NRRLANLLGCCCEGDER  128 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~  128 (264)
                      ..+.+.+.||.|+||.||+|.+..      +..||+|++...... ..+.+.+|++++.++. ||||+++++++...+..
T Consensus        37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~  116 (400)
T cd05105          37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPI  116 (400)
T ss_pred             cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCce
Confidence            356777889999999999998522      347999999765432 3456889999999996 99999999999998999


Q ss_pred             eEEEecCCCCCHHHhhhcCC------------------------------------------------------------
Q 024659          129 LLVAEYMPNDTLAKHLFHWE------------------------------------------------------------  148 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~------------------------------------------------------------  148 (264)
                      ++||||+++|+|.+++....                                                            
T Consensus       117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (400)
T cd05105         117 YIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKE  196 (400)
T ss_pred             EEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhh
Confidence            99999999999998875321                                                            


Q ss_pred             ----------------------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCC
Q 024659          149 ----------------------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN  194 (264)
Q Consensus       149 ----------------------------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~  194 (264)
                                                        ...+++..+..++.|++.||.|||++ +++|+||||+||+++.++.
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivH~dikp~Nill~~~~~  275 (400)
T cd05105         197 ASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK-NCVHRDLAARNVLLAQGKI  275 (400)
T ss_pred             hhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChHhEEEeCCCE
Confidence                                              12467788899999999999999999 9999999999999999999


Q ss_pred             eEEcccCCCcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          195 PRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       195 ~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      +||+|||+++......      ...++..|+|||.+.+..++.++||||||+++|||++ |..||...
T Consensus       276 ~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~  343 (400)
T cd05105         276 VKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGM  343 (400)
T ss_pred             EEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCccc
Confidence            9999999987543321      2234577999999998889999999999999999997 88888653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=8.4e-37  Score=261.34  Aligned_cols=195  Identities=16%  Similarity=0.212  Sum_probs=166.3

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeC------C
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG------D  126 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~  126 (264)
                      .+.|++++.||+|+||.||++.+ ..++.+|+|.+....  ......+.+|+.+++.++|+||+++++++...      .
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   95 (355)
T cd07874          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQ   95 (355)
T ss_pred             hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccc
Confidence            45688889999999999999985 458899999997543  22345678899999999999999999988643      2


Q ss_pred             cceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCccc
Q 024659          127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (264)
Q Consensus       127 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~  206 (264)
                      ..+++|||+++ +|.+.+.    ..+++..+..++.|++.||.|||+. |++||||||+||+++.++.+||+|||+++..
T Consensus        96 ~~~lv~e~~~~-~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDikp~Nill~~~~~~kl~Dfg~~~~~  169 (355)
T cd07874          96 DVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTA  169 (355)
T ss_pred             eeEEEhhhhcc-cHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHHEEECCCCCEEEeeCcccccC
Confidence            46899999976 5777663    2478889999999999999999999 9999999999999999999999999999765


Q ss_pred             CCC---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       207 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ...   ....++..|+|||++.+..++.++|||||||++|+|++|+.||....
T Consensus       170 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  222 (355)
T cd07874         170 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD  222 (355)
T ss_pred             CCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            432   23467899999999998889999999999999999999999997543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=2.8e-36  Score=246.50  Aligned_cols=196  Identities=18%  Similarity=0.182  Sum_probs=172.2

Q ss_pred             ccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      |+.++.||.|+||.||.+. ..+++.+++|.+....  ......+.+|++++++++|+||+++++++.+.+..++++||+
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~   81 (256)
T cd08221           2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYA   81 (256)
T ss_pred             ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEec
Confidence            5677888999999999998 4568899999987542  334566889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC----c
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S  211 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~----~  211 (264)
                      ++++|.+++.......+++.++..++.|++.++.|||+. +++|+||+|+||++++++.+||+|||++.......    .
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~  160 (256)
T cd08221          82 NGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA-GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET  160 (256)
T ss_pred             CCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCChHhEEEeCCCCEEECcCcceEEcccccccccc
Confidence            999999999754455688999999999999999999999 99999999999999999999999999987654332    3


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..++..|+|||++.+..++.++|+||||+++++|++|..||...
T Consensus       161 ~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~  204 (256)
T cd08221         161 VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDAT  204 (256)
T ss_pred             cCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCC
Confidence            45788999999998888999999999999999999999998653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.4e-38  Score=282.49  Aligned_cols=206  Identities=18%  Similarity=0.152  Sum_probs=179.0

Q ss_pred             HHHHHhCCCccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCC---CChhHHHHHHHHHHHhcCCCCCccccceeeE
Q 024659           48 TLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCC  123 (264)
Q Consensus        48 ~~~~~~~~~~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~  123 (264)
                      .+....-.-++|.+++.||+|+||.|..++ ...++.+|+|++++.   ...+..-|+.|-.+|..-..+-|+.+.-.|+
T Consensus        66 ~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ  145 (1317)
T KOG0612|consen   66 KVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ  145 (1317)
T ss_pred             HHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc
Confidence            344444455778899999999999999999 456889999999873   2234455889999999999999999999999


Q ss_pred             eCCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCC
Q 024659          124 EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (264)
Q Consensus       124 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~  203 (264)
                      +++++|+||||++||+|-.++.+  ...+++..++.++..|+.||.-+|+. |+|||||||+|||+|..|.+||+|||.+
T Consensus       146 D~~~LYlVMdY~pGGDlltLlSk--~~~~pE~~ArFY~aEiVlAldslH~m-gyVHRDiKPDNvLld~~GHikLADFGsC  222 (1317)
T KOG0612|consen  146 DERYLYLVMDYMPGGDLLTLLSK--FDRLPEDWARFYTAEIVLALDSLHSM-GYVHRDIKPDNVLLDKSGHIKLADFGSC  222 (1317)
T ss_pred             CccceEEEEecccCchHHHHHhh--cCCChHHHHHHHHHHHHHHHHHHHhc-cceeccCCcceeEecccCcEeeccchhH
Confidence            99999999999999999999964  23799999999999999999999999 9999999999999999999999999988


Q ss_pred             cccCC-C----Cccccccccccccccc----C-CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          204 KNSRD-G----RSYSTNLAFTPPEYLR----T-GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       204 ~~~~~-~----~~~~~~~~y~aPE~~~----~-~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      -.+.. +    ....|||-|.+||++.    + +.|.+.+|+||+||++|||+.|..||+.+.
T Consensus       223 lkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads  285 (1317)
T KOG0612|consen  223 LKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS  285 (1317)
T ss_pred             HhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH
Confidence            76653 2    3458999999999995    2 458999999999999999999999998654

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.7e-38  Score=271.81  Aligned_cols=187  Identities=20%  Similarity=0.315  Sum_probs=167.9

Q ss_pred             CCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCCHHHh
Q 024659           65 HGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKH  143 (264)
Q Consensus        65 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~  143 (264)
                      ||.|+||+||-|++ +++..+|+|.+........+.+.+|+.+.++|+|.||++++|.+..+..+-|.||-++||||.++
T Consensus       583 LGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsL  662 (1226)
T KOG4279|consen  583 LGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSL  662 (1226)
T ss_pred             eecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHH
Confidence            59999999999994 56788999999988777788899999999999999999999999888888899999999999999


Q ss_pred             hhcCCCCCC--CHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC-CCCeEEcccCCCccc----CCCCcccccc
Q 024659          144 LFHWETQPM--KWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNS----RDGRSYSTNL  216 (264)
Q Consensus       144 l~~~~~~~~--~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~-~~~~kl~dfg~~~~~----~~~~~~~~~~  216 (264)
                      ++. +=+++  ++.++-.+.+||+.||.|||++ .|||||||-+|+||+. .|.+||+|||.++..    .-...+.||.
T Consensus       663 Lrs-kWGPlKDNEstm~fYtkQILeGLkYLHen-~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTL  740 (1226)
T KOG4279|consen  663 LRS-KWGPLKDNESTMNFYTKQILEGLKYLHEN-KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTL  740 (1226)
T ss_pred             HHh-ccCCCccchhHHHHHHHHHHHHhhhhhhc-ceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccch
Confidence            974 33456  6888999999999999999999 9999999999999984 699999999987753    2235678999


Q ss_pred             cccccccccCCC--CCCccceechHHHHHHHHhCCCCCC
Q 024659          217 AFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       217 ~y~aPE~~~~~~--~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                      .|||||++..+.  |...+|||||||++.||.||++||.
T Consensus       741 QYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~  779 (1226)
T KOG4279|consen  741 QYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFV  779 (1226)
T ss_pred             hhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCee
Confidence            999999998765  8899999999999999999999995

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=2.8e-36  Score=251.25  Aligned_cols=198  Identities=23%  Similarity=0.361  Sum_probs=169.7

Q ss_pred             ccccccccCCCCCCCeEEEEEeC------CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      .++.+.+.||+|+||.||++...      ++..+++|.+........+.+.+|++.+++++|+||+++++++...+..++
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM   84 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence            44677788999999999999742      345688999876665555678899999999999999999999999899999


Q ss_pred             EEecCCCCCHHHhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeE
Q 024659          131 VAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPR  196 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~k  196 (264)
                      ||||+++++|.+++....              ...+++..++.++.||+.|+.|||++ +++|+||||+||+++.++.++
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~H~dlkp~Nil~~~~~~~~  163 (291)
T cd05094          85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ-HFVHRDLATRNCLVGANLLVK  163 (291)
T ss_pred             EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccCcceEEEccCCcEE
Confidence            999999999999986421              23478899999999999999999999 999999999999999999999


Q ss_pred             EcccCCCcccCCC------CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          197 LSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       197 l~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      |+|||++......      ....++..|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus       164 l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  229 (291)
T cd05094         164 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQL  229 (291)
T ss_pred             ECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            9999998754332      22334678999999998889999999999999999998 88887543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.2e-36  Score=263.96  Aligned_cols=187  Identities=18%  Similarity=0.167  Sum_probs=162.1

Q ss_pred             cccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      .|.+.+.||.|+||.||++.+. .++.||+|....      ..+.+|++++++++|+||+++++++......+++++++.
T Consensus       170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~  243 (461)
T PHA03211        170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR  243 (461)
T ss_pred             CeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC
Confidence            3778888999999999999964 478899996432      235689999999999999999999999999999999995


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC------C
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------R  210 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~------~  210 (264)
                       ++|.+++.. ....+++.+++.++.|++.||.|||++ +|+||||||+||+++.++.++|+|||+++.....      .
T Consensus       244 -~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~-gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~  320 (461)
T PHA03211        244 -SDLYTYLGA-RLRPLGLAQVTAVARQLLSAIDYIHGE-GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHY  320 (461)
T ss_pred             -CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CEEECcCCHHHEEECCCCCEEEcccCCceeccccccccccc
Confidence             578888754 334789999999999999999999999 9999999999999999999999999998754322      1


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCC
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                      ...+|..|+|||++.+..++.++|||||||++|||++|..++.
T Consensus       321 ~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf  363 (461)
T PHA03211        321 GIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLF  363 (461)
T ss_pred             ccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcc
Confidence            2357899999999998889999999999999999999886554

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=1.6e-36  Score=251.65  Aligned_cols=199  Identities=21%  Similarity=0.323  Sum_probs=167.7

Q ss_pred             CccccccccCCCCCCCeEEEEEeC------CCCEEEEEEeCCCCChh-HHHHHHHHHHHhcCCCCCccccceeeEeCCcc
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  128 (264)
                      ++.+.++++||.|+||.||+|...      .+..||+|++....... .+.+.+|+.++.+++|+||+++++++......
T Consensus         4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~   83 (283)
T cd05091           4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL   83 (283)
T ss_pred             HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence            455778889999999999999853      25789999998654332 45688899999999999999999999988899


Q ss_pred             eEEEecCCCCCHHHhhhcC--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCC
Q 024659          129 LLVAEYMPNDTLAKHLFHW--------------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN  194 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~--------------~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~  194 (264)
                      ++++||+.+++|.+++...              ....+++..+..++.|++.||.|||+. +++||||||+||++++++.
T Consensus        84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~-gi~H~dlkp~Nil~~~~~~  162 (283)
T cd05091          84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH-HVVHKDLATRNVLVFDKLN  162 (283)
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc-CccccccchhheEecCCCc
Confidence            9999999999999988421              123478888999999999999999999 9999999999999999999


Q ss_pred             eEEcccCCCcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          195 PRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       195 ~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      +||+|||+++......      ...+++.|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus       163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~  230 (283)
T cd05091         163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY  230 (283)
T ss_pred             eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC
Confidence            9999999987543322      2234578999999988889999999999999999998 77777543

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=1.7e-36  Score=257.50  Aligned_cols=196  Identities=21%  Similarity=0.335  Sum_probs=164.8

Q ss_pred             cccccccCCCCCCCeEEEEEeC------CCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcC-CCCCccccceeeEeC-Ccc
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEG-DER  128 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~-~~~  128 (264)
                      .|++++.||.|+||.||+|.+.      .++.||+|++..... ...+.+.+|++++.++ +|+||+++++++... ...
T Consensus         8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~   87 (337)
T cd05054           8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPL   87 (337)
T ss_pred             HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCE
Confidence            5788889999999999999742      246899999975432 2345678899999999 799999999988654 467


Q ss_pred             eEEEecCCCCCHHHhhhcCC-----------------------------------------------------------C
Q 024659          129 LLVAEYMPNDTLAKHLFHWE-----------------------------------------------------------T  149 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~-----------------------------------------------------------~  149 (264)
                      ++++||+++++|.+++....                                                           .
T Consensus        88 ~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (337)
T cd05054          88 MVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYK  167 (337)
T ss_pred             EEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhh
Confidence            89999999999999885321                                                           1


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC------ccccccccccccc
Q 024659          150 QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEY  223 (264)
Q Consensus       150 ~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~  223 (264)
                      ..+++..+..++.||+.||.|||++ +++||||||+||++++++.++|+|||++.......      ...++..|+|||+
T Consensus       168 ~~l~~~~~~~~~~qi~~aL~~lH~~-~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~  246 (337)
T cd05054         168 EPLTLEDLISYSFQVARGMEFLASR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPES  246 (337)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHH
Confidence            2678999999999999999999999 99999999999999999999999999987653221      2234568999999


Q ss_pred             ccCCCCCCccceechHHHHHHHHh-CCCCCCC
Q 024659          224 LRTGRVTPESVMYSFGTLLLDLLS-GKHIPPS  254 (264)
Q Consensus       224 ~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~  254 (264)
                      +.+..++.++|||||||+++||++ |..||..
T Consensus       247 ~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~  278 (337)
T cd05054         247 IFDKVYTTQSDVWSFGVLLWEIFSLGASPYPG  278 (337)
T ss_pred             hcCCCCCccccHHHHHHHHHHHHHcCCCCCCC
Confidence            999999999999999999999998 9888865

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=1.7e-36  Score=250.53  Aligned_cols=190  Identities=24%  Similarity=0.351  Sum_probs=159.9

Q ss_pred             cCCCCCCCeEEEEEeC-------------------------CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCcccc
Q 024659           64 EHGEKAPNVVYKGKLE-------------------------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANL  118 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~-------------------------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~  118 (264)
                      +||+|+||.||+|...                         ....|++|.+..........+.+|+.+++.++|+||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            5799999999999742                         124588998876554445678889999999999999999


Q ss_pred             ceeeEeCCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC-----
Q 024659          119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-----  193 (264)
Q Consensus       119 ~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~-----  193 (264)
                      ++++......++||||+++++|..++.. ....+++..+..++.|++.||.|||++ +++||||||+||+++..+     
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~dlkp~Nill~~~~~~~~~  159 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDK-NLVHGNVCAKNILLARLGLAEGT  159 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcC-CccCCCCCcccEEEeccCcccCc
Confidence            9999999999999999999999998864 345688999999999999999999999 999999999999997543     


Q ss_pred             --CeEEcccCCCcccCCCCcccccccccccccccC-CCCCCccceechHHHHHHHH-hCCCCCCCC
Q 024659          194 --NPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLL-SGKHIPPSH  255 (264)
Q Consensus       194 --~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~-~g~~~~~~~  255 (264)
                        .++++|||++..........++..|+|||.+.+ ..++.++||||||+++|||+ +|+.||...
T Consensus       160 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~  225 (274)
T cd05076         160 SPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKER  225 (274)
T ss_pred             cceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCcccc
Confidence              389999998765544444567788999998875 45899999999999999994 688887644

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=2.1e-36  Score=248.75  Aligned_cols=198  Identities=17%  Similarity=0.198  Sum_probs=171.5

Q ss_pred             ccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      +.|++.+.||.|+||.||++. ..++..+++|.+....   .....++.+|+.+++.++|+||+++++++...+..++++
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            456778889999999999999 4678899999886532   223456889999999999999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC
Q 024659          133 EYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (264)
Q Consensus       133 e~~~~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~  210 (264)
                      ||+++++|.+++...  ....+++.++..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT  160 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCCEEECcchhhhccccCC
Confidence            999999999988632  234688999999999999999999999 99999999999999999999999999887543322


Q ss_pred             ----cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       211 ----~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                          ...++..|+|||++.+..++.++|+||||+++|+|++|..||...
T Consensus       161 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  209 (267)
T cd08229         161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD  209 (267)
T ss_pred             cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccc
Confidence                235778899999998888999999999999999999999998643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-36  Score=249.34  Aligned_cols=193  Identities=15%  Similarity=0.235  Sum_probs=171.1

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      .|++++.||.|++|.||++.+ .++..+++|.+.... ......+.+|+++++.++|+||+++++.+..+...++++||+
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (274)
T cd06609           2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC   81 (274)
T ss_pred             hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence            467778889999999999995 468899999997653 334556889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----Cc
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS  211 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~~  211 (264)
                      ++++|.+++..   ..+++..+..++.|++.|+.+||+. +++|+||+|+||++++++.++|+|||+++.....    ..
T Consensus        82 ~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~  157 (274)
T cd06609          82 GGGSCLDLLKP---GKLDETYIAFILREVLLGLEYLHEE-GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNT  157 (274)
T ss_pred             CCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCCCEEEcccccceeeccccccccc
Confidence            99999999853   3789999999999999999999999 9999999999999999999999999998765433    23


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      ..++..|+|||++.+..++.++||||||+++|+|++|+.||..
T Consensus       158 ~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~  200 (274)
T cd06609         158 FVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSD  200 (274)
T ss_pred             ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            4567789999999988899999999999999999999999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.1e-37  Score=267.59  Aligned_cols=187  Identities=17%  Similarity=0.218  Sum_probs=162.7

Q ss_pred             cCCCCCCCeEEEEEeC-CCCEEEEEEeCC----CCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCc--ceEEEecCC
Q 024659           64 EHGEKAPNVVYKGKLE-NQFRIAVKRFNR----SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE--RLLVAEYMP  136 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~  136 (264)
                      .||+|+|-+||+|.+. .|..||.-.++.    ......+++..|+.+|+.|+|+||++++..|.+...  .-+|+|.+.
T Consensus        47 vLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~T  126 (632)
T KOG0584|consen   47 VLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFT  126 (632)
T ss_pred             hcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeeccc
Confidence            3599999999999964 477888655442    234456889999999999999999999999988665  778999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceeeccCCCCeeeCCC-CCeEEcccCCCcccCCCC--cc
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-ERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSRDGR--SY  212 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~-~~i~H~dl~~~Nil~~~~-~~~kl~dfg~~~~~~~~~--~~  212 (264)
                      +|+|+.+++  +.+.++...+..|++||++||.|||++ ..|+|||||.+||+|+.+ |.+||+|+|+|+......  ..
T Consensus       127 SGtLr~Y~k--k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksv  204 (632)
T KOG0584|consen  127 SGTLREYRK--KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSV  204 (632)
T ss_pred             CCcHHHHHH--HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcccccee
Confidence            999999997  455688889999999999999999987 469999999999999865 999999999998765543  35


Q ss_pred             cccccccccccccCCCCCCccceechHHHHHHHHhCCCCCC
Q 024659          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       213 ~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                      .||+.|||||+.. ..|++.+||||||++++||+|+..|++
T Consensus       205 IGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYs  244 (632)
T KOG0584|consen  205 IGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYS  244 (632)
T ss_pred             ccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChh
Confidence            7999999999987 779999999999999999999999885

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=3.4e-36  Score=245.49  Aligned_cols=189  Identities=26%  Similarity=0.384  Sum_probs=162.0

Q ss_pred             cCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCCHH
Q 024659           64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA  141 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~  141 (264)
                      .||+|+||.||++.+ .+++.+|+|.+..... .....+.+|++++++++|+||+++++++......++|+||+++++|.
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   81 (252)
T cd05084           2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL   81 (252)
T ss_pred             ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence            579999999999995 5688999998875432 23456889999999999999999999999999999999999999999


Q ss_pred             HhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc------cccc
Q 024659          142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS------YSTN  215 (264)
Q Consensus       142 ~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~------~~~~  215 (264)
                      +++.. ....+++..+..++.|++.||.|||++ +++|+||+|+||+++.++.++|+|||++........      ...+
T Consensus        82 ~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~  159 (252)
T cd05084          82 TFLRT-EGPRLKVKELIQMVENAAAGMEYLESK-HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIP  159 (252)
T ss_pred             HHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCc
Confidence            99863 334688999999999999999999999 999999999999999999999999999875432211      1223


Q ss_pred             ccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCC
Q 024659          216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPS  254 (264)
Q Consensus       216 ~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~  254 (264)
                      ..|+|||.+.+..++.++|+||||+++|||++ |..||..
T Consensus       160 ~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~  199 (252)
T cd05084         160 VKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYAN  199 (252)
T ss_pred             eeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccc
Confidence            56999999988889999999999999999998 7777653

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=2.1e-36  Score=256.04  Aligned_cols=193  Identities=15%  Similarity=0.119  Sum_probs=163.0

Q ss_pred             ccccCCCC--CCCeEEEEE-eCCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           61 IVSEHGEK--APNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        61 ~l~~lg~G--~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      +++.||.|  +|++||++. ..+++.||+|+++....  ...+.+.+|+++++.++||||+++++++..++..++|+||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            45677888  678999998 46789999999986532  22345778999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC-------
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-------  208 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~-------  208 (264)
                      ++++|.+++.......+++..++.++.|++.||.|||++ +++||||||+||+++.++.++++||+.......       
T Consensus        82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~  160 (327)
T cd08227          82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM-GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRV  160 (327)
T ss_pred             CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCChhhEEEecCCcEEEcccchhhccccccccccc
Confidence            999999998653445689999999999999999999999 999999999999999999999999986433211       


Q ss_pred             ----CCcccccccccccccccCC--CCCCccceechHHHHHHHHhCCCCCCC
Q 024659          209 ----GRSYSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       209 ----~~~~~~~~~y~aPE~~~~~--~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                          .....++..|+|||++.+.  .++.++|||||||+++||++|+.||..
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  212 (327)
T cd08227         161 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD  212 (327)
T ss_pred             cccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence                1112345779999999763  588999999999999999999999964

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-37  Score=248.08  Aligned_cols=201  Identities=18%  Similarity=0.216  Sum_probs=176.9

Q ss_pred             CccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCC---hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      ..++..++.||+|.||+|-+++ ...++.+|+|++++.-.   .+...-..|-++|+..+||.+..+.-.++..+.+|+|
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV  246 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV  246 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence            3445677888999999999999 67799999999987532   2233456788999999999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC----
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR----  207 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~----  207 (264)
                      |||..||.|.-.+.  ..+.+++...+.+...|+.||.|||++ +||+||||.+|.++|.+|.+||.|||+++..-    
T Consensus       247 MeyanGGeLf~HLs--rer~FsE~RtRFYGaEIvsAL~YLHs~-~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~  323 (516)
T KOG0690|consen  247 MEYANGGELFFHLS--RERVFSEDRTRFYGAEIVSALGYLHSR-NIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGD  323 (516)
T ss_pred             EEEccCceEeeehh--hhhcccchhhhhhhHHHHHHhhhhhhC-CeeeeechhhhheeccCCceEeeecccchhcccccc
Confidence            99999999998886  456799999999999999999999999 99999999999999999999999999998532    


Q ss_pred             CCCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcccc
Q 024659          208 DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSSF  259 (264)
Q Consensus       208 ~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~~~  259 (264)
                      .....+||+.|.|||++.+..|...+|+|.+|+++|||++|+.||++..-+.
T Consensus       324 t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~k  375 (516)
T KOG0690|consen  324 TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEK  375 (516)
T ss_pred             eeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhH
Confidence            2356789999999999999999999999999999999999999998766543

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=3.9e-36  Score=246.34  Aligned_cols=196  Identities=24%  Similarity=0.372  Sum_probs=167.5

Q ss_pred             cccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCC
Q 024659           58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN  137 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  137 (264)
                      ++++.++||.|++|.||++.+.++..+|+|.+.... ...+.+.+|++++++++|+|++++++++. .+..+++|||+++
T Consensus         7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~   84 (260)
T cd05069           7 SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGK   84 (260)
T ss_pred             HeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCC
Confidence            467778899999999999998777789999887543 23456888999999999999999999874 4568899999999


Q ss_pred             CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC-----cc
Q 024659          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----SY  212 (264)
Q Consensus       138 ~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-----~~  212 (264)
                      ++|.+++.......+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++.......     ..
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~  163 (260)
T cd05069          85 GSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM-NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGA  163 (260)
T ss_pred             CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCC
Confidence            9999999754445688999999999999999999999 99999999999999999999999999987543322     12


Q ss_pred             cccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       213 ~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      .++..|+|||...+..++.++|+||||+++|+|++ |..||....
T Consensus       164 ~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~  208 (260)
T cd05069         164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV  208 (260)
T ss_pred             ccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            34567999999988889999999999999999999 888886543

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=3.3e-36  Score=249.81  Aligned_cols=196  Identities=20%  Similarity=0.295  Sum_probs=168.4

Q ss_pred             cccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      .|++++.||+|++|.||++.+. +++.||+|++.....  ...+.+.+|+.++++++|+|++++++++......++++||
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~   81 (286)
T cd07847           2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY   81 (286)
T ss_pred             ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence            4677888999999999999964 588999999865431  2234578899999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC----
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----  210 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~----  210 (264)
                      +++++|..++.  ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.......    
T Consensus        82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~ql~~~l~~LH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  158 (286)
T cd07847          82 CDHTVLNELEK--NPRGVPEHLIKKIIWQTLQAVNFCHKH-NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYT  158 (286)
T ss_pred             cCccHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCChhhEEEcCCCcEEECccccceecCCCccccc
Confidence            99988887764  334689999999999999999999999 99999999999999999999999999987654432    


Q ss_pred             cccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ...++..|+|||++.+ ..++.++|+||||+++++|++|+.||....
T Consensus       159 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~  205 (286)
T cd07847         159 DYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKS  205 (286)
T ss_pred             CcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence            3356788999999876 447899999999999999999999987543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=4.9e-36  Score=248.39  Aligned_cols=196  Identities=20%  Similarity=0.268  Sum_probs=163.7

Q ss_pred             cccccccCCCCCCCeEEEEEeC-CCC----EEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-NQF----RIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      ++++++.||.|+||.||+|.+. ++.    .+++|.+..... ....++..|+..+.+++|+||+++++++. ....+++
T Consensus         8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i   86 (279)
T cd05111           8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLV   86 (279)
T ss_pred             hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEE
Confidence            4677888999999999999853 343    478888764432 22356778888999999999999999875 4457889


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC-
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-  210 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-  210 (264)
                      +||+++++|.+++.. ....+++..+..++.||+.||.|||++ +++|+||||+||++++++.+||+|||+++...... 
T Consensus        87 ~e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~  164 (279)
T cd05111          87 TQLSPLGSLLDHVRQ-HRDSLDPQRLLNWCVQIAKGMYYLEEH-RMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDK  164 (279)
T ss_pred             EEeCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC-CEeccccCcceEEEcCCCcEEEcCCccceeccCCCc
Confidence            999999999999964 345789999999999999999999999 99999999999999999999999999987543221 


Q ss_pred             -----cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          211 -----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       211 -----~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                           ...++..|+|||.+.+..++.++||||||+++||+++ |..||....
T Consensus       165 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~  216 (279)
T cd05111         165 KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMR  216 (279)
T ss_pred             ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence                 2235578999999988889999999999999999998 888886543

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=3.2e-36  Score=247.52  Aligned_cols=195  Identities=18%  Similarity=0.203  Sum_probs=165.5

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC-----ChhHHHHHHHHHHHhcCCCCCccccceeeEeC--Ccce
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-----WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL  129 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~  129 (264)
                      .|++.+.||+|+||.||++.. .++..|++|.+....     ....+.+.+|++++++++|+||+++++++.+.  ...+
T Consensus         3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (265)
T cd06652           3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLS   82 (265)
T ss_pred             cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEE
Confidence            356677789999999999995 558899999886421     12345688899999999999999999988663  4578


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC-
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-  208 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~-  208 (264)
                      +++||+++++|.+++..  ...+++..+..++.|++.||.+||+. +++|+||+|+||+++.++.++|+|||++..... 
T Consensus        83 ~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~  159 (265)
T cd06652          83 IFMEHMPGGSIKDQLKS--YGALTENVTRKYTRQILEGVSYLHSN-MIVHRDIKGANILRDSVGNVKLGDFGASKRLQTI  159 (265)
T ss_pred             EEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEecCCCCEEECcCccccccccc
Confidence            99999999999999863  34578888999999999999999999 999999999999999999999999999875432 


Q ss_pred             ------CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          209 ------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       209 ------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                            .....++..|+|||.+.+..++.++|+||||+++|||++|+.||...
T Consensus       160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~  212 (265)
T cd06652         160 CLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEF  212 (265)
T ss_pred             cccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCcc
Confidence                  12235678899999998888999999999999999999999998653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=4.7e-36  Score=249.04  Aligned_cols=193  Identities=20%  Similarity=0.326  Sum_probs=165.1

Q ss_pred             ccccccCCCCCCCeEEEEEe-----CCCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeC--CcceE
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLL  130 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~l  130 (264)
                      +++++.||+|+||.||++..     .++..||+|.+.... ......+.+|++++++++|+||+++++++...  ...++
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (284)
T cd05079           6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL   85 (284)
T ss_pred             hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEE
Confidence            56788899999999999974     347889999987653 23345788999999999999999999998775  56789


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~  210 (264)
                      ++||+++++|.+++.. ....+++..+..++.|++.||.|||++ |++|+||||+||+++.++.++|+|||++.......
T Consensus        86 v~e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~~i~~aL~~lH~~-gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~  163 (284)
T cd05079          86 IMEFLPSGSLKEYLPR-NKNKINLKQQLKYAVQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK  163 (284)
T ss_pred             EEEccCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccchheEEEcCCCCEEECCCccccccccCc
Confidence            9999999999999854 334689999999999999999999999 99999999999999999999999999987654321


Q ss_pred             -------cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCC
Q 024659          211 -------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       211 -------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                             ...++..|+|||++.+..++.++||||||++++||+++..++.
T Consensus       164 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~  213 (284)
T cd05079         164 EYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSES  213 (284)
T ss_pred             cceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCc
Confidence                   2344567999999988889999999999999999999876543

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=3.6e-36  Score=249.60  Aligned_cols=195  Identities=21%  Similarity=0.272  Sum_probs=166.4

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      |++++.||+|++|.||+|.. .++..||+|.+.....  .....+.+|+.++++++|+||+++++++..++..++|+||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (285)
T cd07861           2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFL   81 (285)
T ss_pred             ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecC
Confidence            67788899999999999995 4688999999875432  22456788999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----C
Q 024659          136 PNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R  210 (264)
Q Consensus       136 ~~~sL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~  210 (264)
                      . ++|.+++.... +..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......    .
T Consensus        82 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  159 (285)
T cd07861          82 S-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR-RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYT  159 (285)
T ss_pred             C-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCCHHHEEEcCCCcEEECcccceeecCCCccccc
Confidence            7 57888875433 35689999999999999999999999 9999999999999999999999999998754322    2


Q ss_pred             cccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ...++..|+|||.+.+. .++.++|+||||+++++|++|++||...
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~  205 (285)
T cd07861         160 HEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGD  205 (285)
T ss_pred             CCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence            23457889999988754 4788999999999999999999999754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=8.2e-36  Score=242.87  Aligned_cols=190  Identities=27%  Similarity=0.418  Sum_probs=164.5

Q ss_pred             cCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChh-HHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCCHHH
Q 024659           64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK  142 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~  142 (264)
                      .||+|+||.||++...++..+|+|.+....... ...+.+|++++++++|+||+++++++...+..++++||+++++|.+
T Consensus         2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   81 (250)
T cd05085           2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS   81 (250)
T ss_pred             ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence            469999999999998788899999987654333 3468899999999999999999999999889999999999999999


Q ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC-----ccccccc
Q 024659          143 HLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----SYSTNLA  217 (264)
Q Consensus       143 ~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~  217 (264)
                      ++.. ....+++..+..++.|++.+|.|+|+. +++|+||+|+||+++.++.++|+|||++.......     ....+..
T Consensus        82 ~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~  159 (250)
T cd05085          82 FLRK-KKDELKTKQLVKFALDAAAGMAYLESK-NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIK  159 (250)
T ss_pred             HHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCccc
Confidence            8864 334678999999999999999999999 99999999999999999999999999986543221     1233567


Q ss_pred             ccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       218 y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      |+|||++.+..++.++||||||+++|++++ |..||...
T Consensus       160 y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~  198 (250)
T cd05085         160 WTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGM  198 (250)
T ss_pred             ccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCC
Confidence            999999988889999999999999999998 88888643

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=3.8e-36  Score=251.92  Aligned_cols=199  Identities=23%  Similarity=0.321  Sum_probs=165.6

Q ss_pred             CCccccccccCCCCCCCeEEEEEeC-CCC--EEEEEEeCCCC-ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcce
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKLE-NQF--RIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~  129 (264)
                      .++++++.+.||+|+||.||+|.+. ++.  .+++|.+.... ......+.+|++++.++ +|+||+++++++...+..+
T Consensus         5 ~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~   84 (303)
T cd05088           5 EWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY   84 (303)
T ss_pred             chhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence            4566778888999999999999953 343  45777776432 23345688899999999 8999999999999999999


Q ss_pred             EEEecCCCCCHHHhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCe
Q 024659          130 LVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP  195 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~  195 (264)
                      +++||+++++|.+++....              ...+++.+++.++.|++.||.|||++ |++||||||+||+++.++.+
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-gi~H~dlkp~Nili~~~~~~  163 (303)
T cd05088          85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVA  163 (303)
T ss_pred             EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC-CccccccchheEEecCCCcE
Confidence            9999999999999986421              13578899999999999999999999 99999999999999999999


Q ss_pred             EEcccCCCcccCCC---CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCC
Q 024659          196 RLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPS  254 (264)
Q Consensus       196 kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~  254 (264)
                      +|+|||++......   .....+..|+|||++.+..++.++||||||++++||++ |..||..
T Consensus       164 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~  226 (303)
T cd05088         164 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG  226 (303)
T ss_pred             EeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCccc
Confidence            99999998643211   11223567999999988889999999999999999998 8888864

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=3.3e-36  Score=248.14  Aligned_cols=194  Identities=15%  Similarity=0.244  Sum_probs=165.0

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcC-CCCCccccceeeEeC------CcceE
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEG------DERLL  130 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~------~~~~l  130 (264)
                      |++++.||.|+||.||+|.. .+++.+|+|.+.... .....+.+|+.++.++ +|+||+++++++...      ...++
T Consensus         8 y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~i   86 (272)
T cd06637           8 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWL   86 (272)
T ss_pred             hhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEE
Confidence            45667789999999999995 568899999987654 3345688899999998 699999999998753      35789


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC--
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--  208 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~--  208 (264)
                      ++||+++++|.+++.......+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||++.....  
T Consensus        87 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~-~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~  165 (272)
T cd06637          87 VMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV  165 (272)
T ss_pred             EEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHEEECCCCCEEEccCCCceeccccc
Confidence            99999999999998754456789999999999999999999999 999999999999999999999999999875432  


Q ss_pred             --CCccccccccccccccc-----CCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          209 --GRSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       209 --~~~~~~~~~y~aPE~~~-----~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                        .....++..|+|||++.     +..++.++|+||||+++|||++|+.||..
T Consensus       166 ~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~  218 (272)
T cd06637         166 GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD  218 (272)
T ss_pred             ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence              22345678899999986     23578899999999999999999999854

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=6.3e-36  Score=249.86  Aligned_cols=199  Identities=21%  Similarity=0.296  Sum_probs=165.4

Q ss_pred             CccccccccCCCCCCCeEEEEEeCC-C--CEEEEEEeCCC-CChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLEN-Q--FRIAVKRFNRS-AWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~-~--~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l  130 (264)
                      ++.|.+.+.||+|+||.||++.+.+ +  ..+++|.+... .....+.+.+|++++.++ +||||+++++++...+..++
T Consensus         1 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l   80 (297)
T cd05089           1 WEDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI   80 (297)
T ss_pred             CccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence            3567788889999999999998643 3  34688888743 223456788999999999 79999999999998888999


Q ss_pred             EEecCCCCCHHHhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeE
Q 024659          131 VAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPR  196 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~k  196 (264)
                      ++||+++++|.+++....              ...+++..+..++.|++.||.|||+. +++|+||||+||++++++.+|
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~-~ivH~dlkp~Nill~~~~~~k  159 (297)
T cd05089          81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK-QFIHRDLAARNVLVGENLASK  159 (297)
T ss_pred             EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCcCCcceEEECCCCeEE
Confidence            999999999999986421              13578899999999999999999999 999999999999999999999


Q ss_pred             EcccCCCcccCCC---CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          197 LSCFGLMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       197 l~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      |+|||++......   .....+..|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus       160 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~  222 (297)
T cd05089         160 IADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGM  222 (297)
T ss_pred             ECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCC
Confidence            9999998643221   11122456999999988889999999999999999997 88888644

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=6.4e-36  Score=244.49  Aligned_cols=196  Identities=28%  Similarity=0.407  Sum_probs=167.0

Q ss_pred             CccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEe-CCcceEEEec
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLLVAEY  134 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~  134 (264)
                      ...+.+.+.||+|+||.||++... +..+++|.+....  ..+.+.+|+.++++++|+|++++++++.. .+..++++||
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~   81 (256)
T cd05082           5 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY   81 (256)
T ss_pred             HHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence            345778888999999999999865 5578999987543  34568899999999999999999997654 4568999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC-ccc
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-SYS  213 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~  213 (264)
                      +++++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||++++++.+||+|||++....... ...
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~  160 (256)
T cd05082          82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK  160 (256)
T ss_pred             CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeccccchheEEEcCCCcEEecCCccceeccccCCCCc
Confidence            9999999998754445688999999999999999999999 99999999999999999999999999987544322 233


Q ss_pred             ccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       214 ~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      .+..|+|||++.+..++.++||||||+++|+|++ |+.||...
T Consensus       161 ~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~  203 (256)
T cd05082         161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI  203 (256)
T ss_pred             cceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence            4567999999988889999999999999999997 88887643

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=3.1e-36  Score=250.13  Aligned_cols=199  Identities=19%  Similarity=0.249  Sum_probs=173.0

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      .++|++++.||+|+||+||++.. .+++.+|+|.+..... .....+.+|+++++.++|+||+++++.+...+..++|+|
T Consensus         4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (284)
T cd06620           4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME   83 (284)
T ss_pred             HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence            35678889999999999999995 4688999998875432 334678899999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC--CCc
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRS  211 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~--~~~  211 (264)
                      |+++++|.+++..  ...+++..+..++.+++.+|.|||+..+++|+||+|+||++++++.++|+|||++.....  ...
T Consensus        84 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~  161 (284)
T cd06620          84 FMDCGSLDRIYKK--GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADT  161 (284)
T ss_pred             cCCCCCHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCc
Confidence            9999999998863  456899999999999999999999743899999999999999999999999998765422  223


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ..++..|+|||++.+..++.++|+|||||++++|++|+.||....
T Consensus       162 ~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~  206 (284)
T cd06620         162 FVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSN  206 (284)
T ss_pred             cccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccc
Confidence            467889999999988889999999999999999999999997543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=5.4e-37  Score=250.96  Aligned_cols=194  Identities=25%  Similarity=0.389  Sum_probs=170.7

Q ss_pred             ccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChhHH--HHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDAR--QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~--~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      |++++.||+|+||+||++... +++.+|+|.+.........  ...+|+.++++++|+||+++++++......+++||++
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            567889999999999999954 5678999999987644433  2456999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCccc----CCCCc
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS----RDGRS  211 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~----~~~~~  211 (264)
                      .+++|.+++.  ....+++..+..++.|++.||.+||+. +++|+||||+||++++++.++|+|||.+...    .....
T Consensus        81 ~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~-~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~  157 (260)
T PF00069_consen   81 PGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSK-GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNP  157 (260)
T ss_dssp             TTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHT-TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSS
T ss_pred             cccccccccc--ccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccc
Confidence            9999999996  456789999999999999999999999 9999999999999999999999999998642    22234


Q ss_pred             cccccccccccccc-CCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          212 YSTNLAFTPPEYLR-TGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       212 ~~~~~~y~aPE~~~-~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..++..|+|||++. +..++.++|+||||+++++|++|..|+...
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~  202 (260)
T PF00069_consen  158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES  202 (260)
T ss_dssp             SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccc
Confidence            56788999999998 778999999999999999999999999865

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=5.7e-36  Score=248.33  Aligned_cols=192  Identities=24%  Similarity=0.331  Sum_probs=163.4

Q ss_pred             cccccCCCCCCCeEEEEEe-----CCCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeC--CcceEE
Q 024659           60 NIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLLV  131 (264)
Q Consensus        60 ~~l~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv  131 (264)
                      .+++.||+|+||+||++..     .++..||+|.+..... .....+.+|++++++++|+||+++++++...  ...+++
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (283)
T cd05080           7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI   86 (283)
T ss_pred             eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence            6778899999999987652     3577899999986542 2345688999999999999999999988653  357899


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC-
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-  210 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-  210 (264)
                      |||+.+++|.+++..   ..+++.++..++.|++.||.|||++ +++|+||||+||++++++.++|+|||++....... 
T Consensus        87 ~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~  162 (283)
T cd05080          87 MEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE  162 (283)
T ss_pred             ecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccChheEEEcCCCcEEEeecccccccCCcch
Confidence            999999999999853   3589999999999999999999999 99999999999999999999999999987654322 


Q ss_pred             ------cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          211 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       211 ------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                            ...++..|+|||.+.+..++.++||||||++++||++|..|+...
T Consensus       163 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~  213 (283)
T cd05080         163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSP  213 (283)
T ss_pred             hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCC
Confidence                  123456799999998888999999999999999999999887543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=1.7e-36  Score=268.15  Aligned_cols=195  Identities=17%  Similarity=0.178  Sum_probs=159.5

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCC------CCccccceeeEeC-Ccc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN------RRLANLLGCCCEG-DER  128 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~-~~~  128 (264)
                      ..|++++.||.|+||+||++.+ ..++.||+|+++... ........|+++++.++|      .+++++++++... .+.
T Consensus       129 ~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~  207 (467)
T PTZ00284        129 QRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM  207 (467)
T ss_pred             CcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence            4578888999999999999995 557899999997532 223345567777776654      4588888888654 468


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceeeccCCCCeeeCCCC--------------
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDV--------------  193 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~-~~~i~H~dl~~~Nil~~~~~--------------  193 (264)
                      ++|++++ +++|.+++.  ....+++..+..++.||+.||.|||+ . ||+||||||+|||++.++              
T Consensus       208 ~iv~~~~-g~~l~~~l~--~~~~l~~~~~~~i~~qi~~aL~yLH~~~-gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~  283 (467)
T PTZ00284        208 CIVMPKY-GPCLLDWIM--KHGPFSHRHLAQIIFQTGVALDYFHTEL-HLMHTDLKPENILMETSDTVVDPVTNRALPPD  283 (467)
T ss_pred             EEEEecc-CCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcC-CeecCCCCHHHEEEecCCcccccccccccCCC
Confidence            8999988 667888886  34578999999999999999999997 6 999999999999998665              


Q ss_pred             --CeEEcccCCCcccCC-CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          194 --NPRLSCFGLMKNSRD-GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       194 --~~kl~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                        .+||+|||.+..... .....+|..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       284 ~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~  349 (467)
T PTZ00284        284 PCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHD  349 (467)
T ss_pred             CceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence              499999998764332 234578999999999999999999999999999999999999997544

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.5e-37  Score=257.66  Aligned_cols=197  Identities=18%  Similarity=0.279  Sum_probs=173.9

Q ss_pred             ccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCChh--HHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      |.+-+.||+|.|.+|-+++ .-.|..||||++.+..-..  ...+.+|++.++-++||||+++|.+......+|||.|.-
T Consensus        20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELG   99 (864)
T KOG4717|consen   20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELG   99 (864)
T ss_pred             ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEec
Confidence            4455678999999999998 5678999999999764333  346889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC-CCeEEcccCCCcccCCCC---c
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSRDGR---S  211 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~-~~~kl~dfg~~~~~~~~~---~  211 (264)
                      .+|+|++++.+ ...++.+..+.+++.||+.|+.|+|+. ++|||||||+||++.+. |.+||.|||.+..+.++.   .
T Consensus       100 D~GDl~DyImK-He~Gl~E~La~kYF~QI~~AI~YCHqL-HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~T  177 (864)
T KOG4717|consen  100 DGGDLFDYIMK-HEEGLNEDLAKKYFAQIVHAISYCHQL-HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTT  177 (864)
T ss_pred             CCchHHHHHHh-hhccccHHHHHHHHHHHHHHHHHHhhh-hhhcccCCcceeEEeeecCceEeeeccccccCCCcchhhc
Confidence            99999999975 556899999999999999999999999 99999999999998755 999999999988776654   4


Q ss_pred             ccccccccccccccCCCCC-CccceechHHHHHHHHhCCCCCCCCcc
Q 024659          212 YSTNLAFTPPEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~-~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                      .+|+..|.|||++.+..|+ +.+||||||++||-|++|++||....+
T Consensus       178 sCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAND  224 (864)
T KOG4717|consen  178 SCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAND  224 (864)
T ss_pred             ccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccc
Confidence            5788999999999999986 589999999999999999999975443

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=5.5e-36  Score=244.78  Aligned_cols=196  Identities=14%  Similarity=0.153  Sum_probs=169.1

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEe-CCcceEEEec
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLLVAEY  134 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~  134 (264)
                      |++++.||.|++|.||++.. .+++.+++|.+.....  ...+.+.+|++++++++|+|++++++.+.. ....++++||
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~   81 (257)
T cd08223           2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF   81 (257)
T ss_pred             ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence            67888899999999999995 4578999999875432  334568889999999999999999988764 3457899999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----C
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R  210 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~  210 (264)
                      +++++|.+++.......+++.++..++.|++.|+.+||++ +++|+||+|+||+++.++.++|+|||++......    .
T Consensus        82 ~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~-~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~  160 (257)
T cd08223          82 CEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK-HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAS  160 (257)
T ss_pred             cCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCchhEEEecCCcEEEecccceEEecccCCccc
Confidence            9999999998754456789999999999999999999999 9999999999999999999999999998755332    2


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ...+++.|+|||++.+..++.++|+||||+++++|++|+.||...
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~  205 (257)
T cd08223         161 TLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAK  205 (257)
T ss_pred             cccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence            335678899999999888999999999999999999999998643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=7.7e-36  Score=245.34  Aligned_cols=195  Identities=23%  Similarity=0.348  Sum_probs=167.0

Q ss_pred             cccccccCCCCCCCeEEEEEeCC----CCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           58 MENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      .+++.+.||.|+||.||+|.+..    ...||+|.++..... ....+.+|+.++++++|+||+++++.+...+..++++
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~   84 (266)
T cd05033           5 YVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIIT   84 (266)
T ss_pred             HceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEE
Confidence            45677788999999999998642    458999998765433 3456888999999999999999999999888999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC--
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--  210 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~--  210 (264)
                      ||+++++|.+++.. ....+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||++.......  
T Consensus        85 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~Lh~~-~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~  162 (266)
T cd05033          85 EYMENGSLDKFLRE-NDGKFTVGQLVGMLRGIASGMKYLSEM-NYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEAT  162 (266)
T ss_pred             EcCCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcCCCCEEECccchhhcccccccc
Confidence            99999999999864 334689999999999999999999999 99999999999999999999999999988654211  


Q ss_pred             ----cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCC
Q 024659          211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPS  254 (264)
Q Consensus       211 ----~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~  254 (264)
                          ....+..|+|||.+.+..++.++||||||+++|+|++ |..||..
T Consensus       163 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~  211 (266)
T cd05033         163 YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWD  211 (266)
T ss_pred             eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCC
Confidence                1123467999999998889999999999999999998 8888754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=4.3e-36  Score=249.35  Aligned_cols=198  Identities=17%  Similarity=0.245  Sum_probs=168.8

Q ss_pred             cccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      +|++++.||+|+||.||++.+. .+..+|+|.+.... ......+.+|++++++++|+||+++++.+...+..++|+||+
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM   81 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence            5788899999999999999964 68899999887542 233457889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--Ccc
Q 024659          136 PNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSY  212 (264)
Q Consensus       136 ~~~sL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--~~~  212 (264)
                      ++++|..++.... ...+++..+..++.|++.||.|||+..+++|+||+|+||+++.++.++|+|||++......  ...
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  161 (286)
T cd06622          82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTN  161 (286)
T ss_pred             CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccC
Confidence            9999998886421 2368999999999999999999996338999999999999999999999999998754322  233


Q ss_pred             cccccccccccccCCC------CCCccceechHHHHHHHHhCCCCCCCC
Q 024659          213 STNLAFTPPEYLRTGR------VTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       213 ~~~~~y~aPE~~~~~~------~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      .++..|+|||.+.+..      ++.++|+||||+++|+|++|+.||...
T Consensus       162 ~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~  210 (286)
T cd06622         162 IGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPE  210 (286)
T ss_pred             CCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCc
Confidence            5677899999986543      578999999999999999999998643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=5.3e-36  Score=248.59  Aligned_cols=194  Identities=23%  Similarity=0.345  Sum_probs=165.7

Q ss_pred             cccccccCCCCCCCeEEEEEe-----CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEe--CCcceE
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLL  130 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l  130 (264)
                      .+++++.||+|+||.||++..     .++..|++|.+........+.+.+|++++++++|+||+++++++..  ....++
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l   84 (284)
T cd05081           5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL   84 (284)
T ss_pred             cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEE
Confidence            467888899999999999974     2478999999987665556778999999999999999999998754  346789


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~  210 (264)
                      |+||+++++|.+++.. ....+++..+..++.|++.||.|||+. |++|+||||+||++++++.++|+|||++.......
T Consensus        85 v~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~aL~~LH~~-~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~  162 (284)
T cd05081          85 VMEYLPYGSLRDYLQK-HRERLDHRKLLLYASQICKGMEYLGSK-RYVHRDLATRNILVESENRVKIGDFGLTKVLPQDK  162 (284)
T ss_pred             EEEecCCCCHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCHhhEEECCCCeEEECCCcccccccCCC
Confidence            9999999999999853 234588999999999999999999999 99999999999999999999999999988654332


Q ss_pred             cc-------cccccccccccccCCCCCCccceechHHHHHHHHhCCCCCC
Q 024659          211 SY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       211 ~~-------~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                      ..       ..+..|+|||++.+..++.++|+||||++++||++|..++.
T Consensus       163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~  212 (284)
T cd05081         163 EYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSC  212 (284)
T ss_pred             cceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCC
Confidence            21       12345999999988889999999999999999999877654

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=2.5e-36  Score=251.75  Aligned_cols=190  Identities=17%  Similarity=0.273  Sum_probs=167.4

Q ss_pred             cccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCCH
Q 024659           62 VSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL  140 (264)
Q Consensus        62 l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL  140 (264)
                      ...||+|+||.||++.. .++..||+|.+........+.+.+|+..++.++|+||+++++.+...+..++++||+++++|
T Consensus        27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L  106 (292)
T cd06658          27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL  106 (292)
T ss_pred             hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence            35679999999999995 56889999999766555566788999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----Ccccccc
Q 024659          141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTNL  216 (264)
Q Consensus       141 ~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~  216 (264)
                      .+++.   ...+++..+..++.||+.||.|||++ +++|+||+|+||++++++.++|+|||++......    ....++.
T Consensus       107 ~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~  182 (292)
T cd06658         107 TDIVT---HTRMNEEQIATVCLSVLRALSYLHNQ-GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTP  182 (292)
T ss_pred             HHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCc
Confidence            99874   33588999999999999999999999 9999999999999999999999999998654322    2245678


Q ss_pred             cccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       217 ~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      .|+|||.+.+..++.++|+||||++++||++|+.||...
T Consensus       183 ~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~  221 (292)
T cd06658         183 YWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNE  221 (292)
T ss_pred             cccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            899999998888999999999999999999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=6.5e-36  Score=244.44  Aligned_cols=189  Identities=25%  Similarity=0.354  Sum_probs=164.6

Q ss_pred             cCCCCCCCeEEEEEeCC--C--CEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCC
Q 024659           64 EHGEKAPNVVYKGKLEN--Q--FRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND  138 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  138 (264)
                      .||+|++|.||++.+.+  +  ..+|+|.+..... ...+.+.+|++.+++++|+||+++++.+.. ...++++||++++
T Consensus         2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~   80 (257)
T cd05040           2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLG   80 (257)
T ss_pred             cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCC
Confidence            57999999999998643  2  3689999987765 456678999999999999999999999987 8899999999999


Q ss_pred             CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC-------c
Q 024659          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-------S  211 (264)
Q Consensus       139 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-------~  211 (264)
                      +|.+++.......+++..+..++.|++.||.|||++ +++|+||+|+||+++.++.+||+|||++.......       .
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  159 (257)
T cd05040          81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK-RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEH  159 (257)
T ss_pred             cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC-CccccccCcccEEEecCCEEEeccccccccccccccceecccC
Confidence            999999753325689999999999999999999999 99999999999999999999999999987654321       2


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPS  254 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~  254 (264)
                      ..++..|+|||++.+..++.++||||||++++||++ |+.||..
T Consensus       160 ~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~  203 (257)
T cd05040         160 LKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAG  203 (257)
T ss_pred             CCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence            345678999999998889999999999999999998 9988853

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=2.9e-36  Score=251.96  Aligned_cols=190  Identities=16%  Similarity=0.245  Sum_probs=167.4

Q ss_pred             cccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCCH
Q 024659           62 VSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL  140 (264)
Q Consensus        62 l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL  140 (264)
                      ..+||.|+||.||++.. .+++.||+|.+........+.+.+|+..++.++||||+++++.+..++..++++||+++++|
T Consensus        26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L  105 (297)
T cd06659          26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL  105 (297)
T ss_pred             hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence            34679999999999995 46889999999765545556788999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----Ccccccc
Q 024659          141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTNL  216 (264)
Q Consensus       141 ~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~  216 (264)
                      ..++.   ...+++..+..++.|++.||.+||+. +++|+||+|+||+++.++.++|+|||++......    ....++.
T Consensus       106 ~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~  181 (297)
T cd06659         106 TDIVS---QTRLNEEQIATVCESVLQALCYLHSQ-GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTP  181 (297)
T ss_pred             HHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCc
Confidence            98874   34688999999999999999999999 9999999999999999999999999998654322    2345778


Q ss_pred             cccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       217 ~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      .|+|||++.+..++.++|+||||++++||++|+.||...
T Consensus       182 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~  220 (297)
T cd06659         182 YWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSD  220 (297)
T ss_pred             cccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            999999999888999999999999999999999998643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=7.1e-36  Score=244.16  Aligned_cols=196  Identities=29%  Similarity=0.428  Sum_probs=171.0

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      ..+++.+.||.|+||.||++... ++.||+|.+..... ..+++.+|+.++++++|+||+++++++...+..++++||++
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   83 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA   83 (256)
T ss_pred             hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence            34677788899999999999865 56899999986653 45678899999999999999999999988889999999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc-cccc
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-YSTN  215 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~  215 (264)
                      +++|.+++.......+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||.+........ ...+
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~-~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~  162 (256)
T cd05039          84 KGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK-NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLP  162 (256)
T ss_pred             CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccchhcccceEEEeCCCCEEEcccccccccccccccCCCc
Confidence            99999999754445789999999999999999999999 999999999999999999999999999886643322 2335


Q ss_pred             ccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       216 ~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      ..|+|||++....++.++|+||||+++++|++ |..||...
T Consensus       163 ~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~  203 (256)
T cd05039         163 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI  203 (256)
T ss_pred             ccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence            67999999988889999999999999999997 88887654

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=4.9e-36  Score=246.80  Aligned_cols=200  Identities=19%  Similarity=0.270  Sum_probs=169.2

Q ss_pred             HHHhCCCccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcc
Q 024659           50 RTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (264)
Q Consensus        50 ~~~~~~~~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  128 (264)
                      +.++++++....   ||+|+||.||++. ..++..|++|.+........+.+.+|+.++++++|+||+++++++..++..
T Consensus         4 ~~~~~~~~~~~~---lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   80 (268)
T cd06624           4 EYEYDENGERVV---LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFF   80 (268)
T ss_pred             ccccccCCceEE---EecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEE
Confidence            344556655544   5999999999999 456788999999877666677899999999999999999999999999999


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCC--CHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC-CCCeEEcccCCCcc
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPM--KWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKN  205 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~--~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~-~~~~kl~dfg~~~~  205 (264)
                      ++++||+++++|.+++... ...+  +...+..++.|++.||.|||++ +++|+||+|+||+++. ++.++|+|||++..
T Consensus        81 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~  158 (268)
T cd06624          81 KIFMEQVPGGSLSALLRSK-WGPLKDNEQTIIFYTKQILEGLKYLHDN-QIVHRDIKGDNVLVNTYSGVVKISDFGTSKR  158 (268)
T ss_pred             EEEEecCCCCCHHHHHHHh-cccCCCcHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence            9999999999999998642 2344  7888899999999999999999 9999999999999986 67999999999865


Q ss_pred             cCCC----CcccccccccccccccCCC--CCCccceechHHHHHHHHhCCCCCCC
Q 024659          206 SRDG----RSYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       206 ~~~~----~~~~~~~~y~aPE~~~~~~--~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      ....    ....++..|+|||++....  ++.++|+||||+++|+|++|+.||..
T Consensus       159 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~  213 (268)
T cd06624         159 LAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIE  213 (268)
T ss_pred             cccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCcc
Confidence            4321    2235678999999987644  78899999999999999999999864

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=5.7e-36  Score=247.60  Aligned_cols=197  Identities=22%  Similarity=0.368  Sum_probs=164.8

Q ss_pred             cccccccCCCCCCCeEEEEEeC------CCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      .|++.++||+|+||.||++.+.      .+..||+|.+..... ....++.+|+.+++.++|+||+++++++......++
T Consensus         7 ~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~l   86 (277)
T cd05062           7 KITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV   86 (277)
T ss_pred             HceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEE
Confidence            3667788899999999998753      246799999865432 334568899999999999999999999988889999


Q ss_pred             EEecCCCCCHHHhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCC
Q 024659          131 VAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL  202 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~--------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~  202 (264)
                      |+||+++++|.+++....        ...+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||+
T Consensus        87 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~~vH~dlkp~Nil~~~~~~~~l~dfg~  165 (277)
T cd05062          87 IMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGM  165 (277)
T ss_pred             EEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCcchheEEEcCCCCEEECCCCC
Confidence            999999999999986421        12356788999999999999999999 999999999999999999999999999


Q ss_pred             CcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          203 MKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       203 ~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      +.......      ...++..|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~  225 (277)
T cd05062         166 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGM  225 (277)
T ss_pred             ccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence            87543221      2234678999999998889999999999999999999 67777543

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=5.1e-36  Score=251.58  Aligned_cols=199  Identities=22%  Similarity=0.328  Sum_probs=167.3

Q ss_pred             ccccccccCCCCCCCeEEEEEeC--------CCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGD  126 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~  126 (264)
                      +.|.+.++||+|+||.||++...        ....+|+|.+.... ......+.+|+++++++ +|+||+++++++...+
T Consensus        18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   97 (307)
T cd05098          18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   97 (307)
T ss_pred             HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence            35788889999999999999752        23469999998653 23455688899999999 7999999999999999


Q ss_pred             cceEEEecCCCCCHHHhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC
Q 024659          127 ERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD  192 (264)
Q Consensus       127 ~~~lv~e~~~~~sL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~  192 (264)
                      ..++|+||+++++|.+++....              ...+++.+++.++.|++.||.|||+. +++|+||||+||+++.+
T Consensus        98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~-gi~H~dlkp~Nill~~~  176 (307)
T cd05098          98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTED  176 (307)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC-CcccccccHHheEEcCC
Confidence            9999999999999999996432              13478899999999999999999999 99999999999999999


Q ss_pred             CCeEEcccCCCcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          193 VNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       193 ~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      +.++|+|||++.......      ....+..|+|||++.+..++.++|+||||+++|||++ |..||....
T Consensus       177 ~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~  247 (307)
T cd05098         177 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP  247 (307)
T ss_pred             CcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC
Confidence            999999999987543221      1123467999999988889999999999999999998 777776443

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=7.3e-36  Score=245.86  Aligned_cols=197  Identities=22%  Similarity=0.348  Sum_probs=167.0

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CC---CEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQ---FRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      ..+++.+.||.|+||.||+|.+. ++   ..|++|.+.... ......+..|+.++++++||||+++++++......+++
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   83 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII   83 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence            34677888999999999999954 33   369999987653 33456789999999999999999999999988899999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS  211 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~  211 (264)
                      +||+++++|.+++.. ....+++.+++.++.|++.||.|||++ +++|+||+|+||+++.++.++|+|||++........
T Consensus        84 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~l~~al~~lH~~-g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~  161 (269)
T cd05065          84 TEFMENGALDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLSEM-NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS  161 (269)
T ss_pred             EecCCCCcHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence            999999999999864 345688999999999999999999999 999999999999999999999999999875433211


Q ss_pred             ---c----c--ccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          212 ---Y----S--TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       212 ---~----~--~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                         .    .  .+..|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~  215 (269)
T cd05065         162 DPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM  215 (269)
T ss_pred             ccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCC
Confidence               1    1  1347999999998889999999999999999886 88888643

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=9.3e-36  Score=244.13  Aligned_cols=196  Identities=21%  Similarity=0.346  Sum_probs=168.5

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      ..+.+.++||+|+||.||++.+.++..+++|.+.... ...+.+.+|++++++++|+||+++++.+.. ...++++||++
T Consensus         6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~   83 (260)
T cd05073           6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMA   83 (260)
T ss_pred             cceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCC
Confidence            3467888899999999999998777789999887543 234678899999999999999999999877 77899999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC-----c
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S  211 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-----~  211 (264)
                      +++|.+++.......+++.++..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||.+.......     .
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~  162 (260)
T cd05073          84 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG  162 (260)
T ss_pred             CCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC-CccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccC
Confidence            99999999754455678889999999999999999999 99999999999999999999999999987543321     1


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      ..++..|+|||++....++.++|+||||++++++++ |..||...
T Consensus       163 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~  207 (260)
T cd05073         163 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM  207 (260)
T ss_pred             CcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCC
Confidence            223467999999988889999999999999999999 88888654

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=5.7e-36  Score=250.76  Aligned_cols=198  Identities=21%  Similarity=0.323  Sum_probs=168.7

Q ss_pred             ccccccccCCCCCCCeEEEEEeC------CCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDER  128 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~  128 (264)
                      +++.+.+.||+|+||.||++...      .+..+|+|.+..... ...+.+.+|+++++++ +|+||+++++.+...+..
T Consensus        35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~  114 (302)
T cd05055          35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI  114 (302)
T ss_pred             HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence            34677788899999999999741      245799999876532 3345688999999999 799999999999998999


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      ++++||+++++|.+++.......+++.++..++.|++.||.|||++ +++|+||||+||+++.++.++++|||++.....
T Consensus       115 ~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~  193 (302)
T cd05055         115 LVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNVLLTHGKIVKICDFGLARDIMN  193 (302)
T ss_pred             EEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeehhhhccceEEEcCCCeEEECCCcccccccC
Confidence            9999999999999998653444589999999999999999999999 999999999999999999999999999875433


Q ss_pred             CC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          209 GR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       209 ~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      ..      ...++..|+|||.+.+..++.++||||||+++|||++ |..||...
T Consensus       194 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~  247 (302)
T cd05055         194 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGM  247 (302)
T ss_pred             CCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCC
Confidence            22      1234577999999998889999999999999999998 88887643

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=7.1e-36  Score=243.87  Aligned_cols=193  Identities=16%  Similarity=0.241  Sum_probs=171.3

Q ss_pred             cccccccCCCCCCCeEEEEEeCC-CCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           58 MENIVSEHGEKAPNVVYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      .|++.+.||.|+||.||++...+ +..+++|.+.....  .+.+.+|++++++++|+||+++++.+......++++||++
T Consensus         4 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   81 (256)
T cd06612           4 VFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG   81 (256)
T ss_pred             cchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence            46777888999999999999654 78999999876532  5678999999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC----cc
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----SY  212 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~----~~  212 (264)
                      +++|.+++.. ....+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++.......    ..
T Consensus        82 ~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~~l~~lh~~-~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~  159 (256)
T cd06612          82 AGSVSDIMKI-TNKTLTEEEIAAILYQTLKGLEYLHSN-KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTV  159 (256)
T ss_pred             CCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEECCCCcEEEcccccchhcccCccccccc
Confidence            9999999854 346789999999999999999999999 99999999999999999999999999987654332    23


Q ss_pred             cccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       213 ~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      .++..|+|||++.+..++.++||||||+++++|++|+.||..
T Consensus       160 ~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~  201 (256)
T cd06612         160 IGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSD  201 (256)
T ss_pred             cCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            467889999999888899999999999999999999999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=1e-35  Score=246.36  Aligned_cols=195  Identities=21%  Similarity=0.295  Sum_probs=164.0

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCC----EEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQF----RIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      ++++++.||.|+||+||+|.+ .++.    .||+|.+...... ....+.+|+.++..+.|+||+++++++.. ...+++
T Consensus         8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~   86 (279)
T cd05109           8 ELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLV   86 (279)
T ss_pred             heeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEE
Confidence            467788899999999999984 4443    4899998764332 34568889999999999999999999865 457899


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS  211 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~  211 (264)
                      ++|+++++|.+++.. ....+++..++.++.|++.||.|||++ +++|+||||+||++++++.+||+|||+++.......
T Consensus        87 ~~~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~-~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~  164 (279)
T cd05109          87 TQLMPYGCLLDYVRE-NKDRIGSQDLLNWCVQIAKGMSYLEEV-RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET  164 (279)
T ss_pred             EEcCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccccceEEEcCCCcEEECCCCceeecccccc
Confidence            999999999999864 344689999999999999999999999 999999999999999999999999999876543221


Q ss_pred             ------ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          212 ------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       212 ------~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                            ...+..|+|||.+.+..++.++||||||+++|||++ |..||...
T Consensus       165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~  215 (279)
T cd05109         165 EYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGI  215 (279)
T ss_pred             eeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence                  233567999999988889999999999999999998 88887643

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=1.9e-36  Score=248.01  Aligned_cols=187  Identities=23%  Similarity=0.359  Sum_probs=161.0

Q ss_pred             cCCCCCCCeEEEEEeCC--------CCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           64 EHGEKAPNVVYKGKLEN--------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      .||.|+||.||+|....        ...+++|.+........+.+.+|+.+++.++|+|++++++++..+...++||||+
T Consensus         2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~   81 (258)
T cd05078           2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV   81 (258)
T ss_pred             CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence            57999999999998532        2348888887655455667889999999999999999999999988999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCC--------eEEcccCCCcccC
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN--------PRLSCFGLMKNSR  207 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~--------~kl~dfg~~~~~~  207 (264)
                      ++++|.+++.. ....+++..++.++.||+.||.|||++ +++||||||+||+++.++.        ++++|||++....
T Consensus        82 ~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~  159 (258)
T cd05078          82 KFGSLDTYLKK-NKNLINISWKLEVAKQLAWALHFLEDK-GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL  159 (258)
T ss_pred             CCCcHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCccceEEEecccccccCCCceEEecccccccccC
Confidence            99999999864 334688999999999999999999999 9999999999999987654        6999999987766


Q ss_pred             CCCcccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCC
Q 024659          208 DGRSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIP  252 (264)
Q Consensus       208 ~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~  252 (264)
                      ......++..|+|||++.+. .++.++||||||+++|||++|..++
T Consensus       160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~  205 (258)
T cd05078         160 PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKP  205 (258)
T ss_pred             CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence            65566778899999999864 4799999999999999999996444

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=1.1e-35  Score=244.26  Aligned_cols=197  Identities=19%  Similarity=0.198  Sum_probs=171.1

Q ss_pred             cccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCC---CChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      .|.+.+.||+|+||.||++... +++.+++|.++..   .......+.+|++++++++|+|++++++.+...+..++++|
T Consensus         3 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   82 (267)
T cd08224           3 NFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLE   82 (267)
T ss_pred             ceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEe
Confidence            4677788899999999999965 7889999988642   22235578899999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--
Q 024659          134 YMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--  209 (264)
                      |+++++|.+++...  ....+++.++..++.|++.||.+||+. +++|+||+|+||+++.++.++|+|||++......  
T Consensus        83 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~  161 (267)
T cd08224          83 LADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK-RIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT  161 (267)
T ss_pred             cCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC-CEecCCcChhhEEECCCCcEEEeccceeeeccCCCc
Confidence            99999999988642  235688999999999999999999999 9999999999999999999999999998754332  


Q ss_pred             --CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                        ....++..|+|||.+.+..++.++|+||||+++|+|++|+.||...
T Consensus       162 ~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  209 (267)
T cd08224         162 AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD  209 (267)
T ss_pred             ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccC
Confidence              2245678899999998888999999999999999999999998654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=5.9e-37  Score=260.86  Aligned_cols=198  Identities=22%  Similarity=0.356  Sum_probs=173.3

Q ss_pred             ccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChh-HHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCC
Q 024659           59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN  137 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  137 (264)
                      ..+.++||+|-||.|.++..+++..||+|.++...-.. ..+|.+|+++|.+|+||||++++++|..++.+++|+||++.
T Consensus       540 L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEn  619 (807)
T KOG1094|consen  540 LRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMEN  619 (807)
T ss_pred             eehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhc
Confidence            45778899999999999999998999999999875444 47899999999999999999999999999999999999999


Q ss_pred             CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCccc----
Q 024659          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS----  213 (264)
Q Consensus       138 ~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~~~----  213 (264)
                      |+|.+++..............+|+.||+.|++||.+. ++|||||.+.|+|++.++++||+|||+++....+..+.    
T Consensus       620 GDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~-nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr  698 (807)
T KOG1094|consen  620 GDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL-NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGR  698 (807)
T ss_pred             CcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh-chhhccccccceeecCcccEEecCcccccccccCCceeeecc
Confidence            9999999754333344556678999999999999999 99999999999999999999999999999776665443    


Q ss_pred             --ccccccccccccCCCCCCccceechHHHHHHHH--hCCCCCCCCcc
Q 024659          214 --TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLL--SGKHIPPSHVS  257 (264)
Q Consensus       214 --~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~--~g~~~~~~~~~  257 (264)
                        -..+|||+|.+.-++++.++|+|+||+++||++  +.+.|++.-.+
T Consensus       699 ~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~  746 (807)
T KOG1094|consen  699 AVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD  746 (807)
T ss_pred             eeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH
Confidence              248999999999999999999999999999974  56777765443

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=4.7e-36  Score=250.21  Aligned_cols=197  Identities=18%  Similarity=0.265  Sum_probs=172.6

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      ...|.+++.||+|+||.||++.. .++..+++|.+........+.+.+|+.++++++|||++++++.+...+..++|+||
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~   97 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY   97 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence            45678888999999999999984 56789999998765545566788999999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC----
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----  210 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~----  210 (264)
                      +++++|.+++..   ..+++..+..++.|++.||.|||++ +++|+||+|+||+++.++.++|+|||++.......    
T Consensus        98 ~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~-gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~  173 (293)
T cd06647          98 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS  173 (293)
T ss_pred             CCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC-CEeeccCCHHHEEEcCCCCEEEccCcceecccccccccc
Confidence            999999999853   3578889999999999999999999 99999999999999999999999999876543322    


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ...++..|+|||.+....++.++|+||||+++|++++|+.||....
T Consensus       174 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~  219 (293)
T cd06647         174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN  219 (293)
T ss_pred             cccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            2356778999999988889999999999999999999999997543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=1.1e-35  Score=249.61  Aligned_cols=197  Identities=19%  Similarity=0.230  Sum_probs=169.4

Q ss_pred             CCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC---hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      ....|.+++.||.|+||.||++.. .+++.||+|.+.....   .....+.+|+++++.++|+||+++.+++...+..++
T Consensus        13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~l   92 (307)
T cd06607          13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWL   92 (307)
T ss_pred             cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEE
Confidence            334577778899999999999995 4688999999864332   233568899999999999999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~  210 (264)
                      |+||+.+ ++.+++.. ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus        93 v~e~~~g-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~L~~LH~~-~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~  169 (307)
T cd06607          93 VMEYCLG-SASDILEV-HKKPLQEVEIAAICHGALQGLAYLHSH-ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPAN  169 (307)
T ss_pred             EHHhhCC-CHHHHHHH-cccCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcccEEECCCCCEEEeecCcceecCCCC
Confidence            9999975 67776643 345689999999999999999999999 99999999999999999999999999988766666


Q ss_pred             ccccccccccccccc---CCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          211 SYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~---~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      ...++..|+|||++.   ...++.++||||||+++|||++|+.||..
T Consensus       170 ~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~  216 (307)
T cd06607         170 SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN  216 (307)
T ss_pred             CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCC
Confidence            667888999999874   34588999999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-35  Score=243.12  Aligned_cols=191  Identities=32%  Similarity=0.489  Sum_probs=167.9

Q ss_pred             cCCCCCCCeEEEEEeC-C---CCEEEEEEeCCCCChh-HHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCC
Q 024659           64 EHGEKAPNVVYKGKLE-N---QFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND  138 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  138 (264)
                      .||.|+||.||++... .   +..+++|.+....... .+.+.+|++.++.++|+|++++++++......++++||++++
T Consensus         2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   81 (262)
T cd00192           2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGG   81 (262)
T ss_pred             ccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCC
Confidence            5799999999999954 3   7899999998765333 567889999999999999999999999988999999999999


Q ss_pred             CHHHhhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--
Q 024659          139 TLAKHLFHWE-------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (264)
Q Consensus       139 sL~~~l~~~~-------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--  209 (264)
                      +|.+++....       ...+++..+..++.|++.||.+||++ +++|+||+|+||+++.++.++|+|||.+......  
T Consensus        82 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~  160 (262)
T cd00192          82 DLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK-KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY  160 (262)
T ss_pred             cHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC-CcccCccCcceEEECCCCcEEEcccccccccccccc
Confidence            9999997531       36789999999999999999999999 9999999999999999999999999998866543  


Q ss_pred             ----CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          210 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       210 ----~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                          ....++..|+|||.+....++.++||||||+++++|++ |..||...
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~  211 (262)
T cd00192         161 YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGL  211 (262)
T ss_pred             cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCC
Confidence                23355788999999988889999999999999999999 58888654

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=6.5e-36  Score=244.51  Aligned_cols=187  Identities=26%  Similarity=0.375  Sum_probs=159.8

Q ss_pred             cCCCCCCCeEEEEEeCCCC-----------EEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           64 EHGEKAPNVVYKGKLENQF-----------RIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      .||+|+||.||++.+.+..           .+++|.+...... ...+.+|+.++++++|+||+++++++.. ...++|+
T Consensus         2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~   79 (259)
T cd05037           2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE   79 (259)
T ss_pred             cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence            5799999999999965432           5778877655433 5678899999999999999999999987 7789999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC-------CeEEcccCCCcc
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-------NPRLSCFGLMKN  205 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~-------~~kl~dfg~~~~  205 (264)
                      ||+++++|.+++.. ....+++..+..++.||+.||.|||+. +++|+||||+||+++.++       .++|+|||++..
T Consensus        80 e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~  157 (259)
T cd05037          80 EYVKFGPLDVFLHR-EKNNVSLHWKLDVAKQLASALHYLEDK-KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT  157 (259)
T ss_pred             EcCCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhhC-CeecccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence            99999999999864 233688999999999999999999999 999999999999999877       799999999987


Q ss_pred             cCCCCcccccccccccccccCC--CCCCccceechHHHHHHHHhC-CCCCCC
Q 024659          206 SRDGRSYSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSG-KHIPPS  254 (264)
Q Consensus       206 ~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DiwslG~~l~el~~g-~~~~~~  254 (264)
                      ........++..|+|||++.+.  .++.++|+||||+++++|++| ..|+..
T Consensus       158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~  209 (259)
T cd05037         158 VLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLST  209 (259)
T ss_pred             cccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCccc
Confidence            6655555667889999999876  689999999999999999995 555543

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=1.1e-35  Score=243.29  Aligned_cols=188  Identities=21%  Similarity=0.294  Sum_probs=160.2

Q ss_pred             cCCCCCCCeEEEEEe---CCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCC
Q 024659           64 EHGEKAPNVVYKGKL---ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND  138 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  138 (264)
                      +||+|+||.||+|.+   .++..+|+|.+.....  ...+.+.+|+.+++.++|+||+++++++. .+..++++||++++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            579999999999964   3467899999875432  23456889999999999999999999875 45678999999999


Q ss_pred             CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc-------
Q 024659          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-------  211 (264)
Q Consensus       139 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~-------  211 (264)
                      +|.+++.  ....+++..+..++.|++.||.+||++ +++|+||||.||+++.++.++|+|||++........       
T Consensus        81 ~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  157 (257)
T cd05116          81 PLNKFLQ--KNKHVTEKNITELVHQVSMGMKYLEET-NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTH  157 (257)
T ss_pred             cHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCC
Confidence            9999986  334688999999999999999999999 999999999999999999999999999876533221       


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      ..++..|+|||.+....++.++|+||||+++|||++ |+.||...
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~  202 (257)
T cd05116         158 GKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGM  202 (257)
T ss_pred             CCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence            122468999999988889999999999999999998 89888654

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=4.8e-36  Score=248.03  Aligned_cols=192  Identities=17%  Similarity=0.283  Sum_probs=168.3

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      |..++.||+|+||.||+|.+ .++..||+|.+.... ....+.+.+|++++++++|+||+++++.+...+..++|+||++
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG   85 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence            55667789999999999985 457889999987543 2345578899999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC----cc
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----SY  212 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~----~~  212 (264)
                      +++|.+++.   ...+++..+..++.|++.|+.|||++ +++|+||+|+||++++++.++|+|||++.......    ..
T Consensus        86 ~~~L~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~-~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~  161 (277)
T cd06642          86 GGSALDLLK---PGPLEETYIATILREILKGLDYLHSE-RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF  161 (277)
T ss_pred             CCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcC-CeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcc
Confidence            999999884   35688999999999999999999999 99999999999999999999999999987654322    23


Q ss_pred             cccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       213 ~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      .++..|+|||++.+..++.++|+||||++++||++|+.|+..
T Consensus       162 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~  203 (277)
T cd06642         162 VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSD  203 (277)
T ss_pred             cCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcc
Confidence            467889999999988899999999999999999999999864

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=1.1e-35  Score=243.50  Aligned_cols=189  Identities=21%  Similarity=0.315  Sum_probs=159.9

Q ss_pred             cCCCCCCCeEEEEEeC---CCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCC
Q 024659           64 EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT  139 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~s  139 (264)
                      +||+|+||.||+|.+.   .+..||+|.+...... ..+.+.+|+.++++++|+||+++++++. ....++|+||+++++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence            4799999999999753   3567999999765432 3456889999999999999999999875 457899999999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc-------c
Q 024659          140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-------Y  212 (264)
Q Consensus       140 L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~-------~  212 (264)
                      |.+++.. ....+++..++.++.|++.||.|||++ +++|+||||+||+++.++.++|+|||++........       .
T Consensus        81 L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  158 (257)
T cd05115          81 LNKFLSG-KKDEITVSNVVELMHQVSMGMKYLEGK-NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG  158 (257)
T ss_pred             HHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhc-CeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence            9998864 345789999999999999999999999 999999999999999999999999999875432211       1


Q ss_pred             cccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       213 ~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      .++..|+|||++....++.++||||||+++||+++ |+.||...
T Consensus       159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~  202 (257)
T cd05115         159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKM  202 (257)
T ss_pred             CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcC
Confidence            22467999999988889999999999999999996 88888643

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=8.7e-36  Score=245.01  Aligned_cols=194  Identities=20%  Similarity=0.303  Sum_probs=167.0

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChh---------HHHHHHHHHHHhcCCCCCccccceeeEeCCcc
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD---------ARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  128 (264)
                      +.+.+.||.|++|.||+|.. .++..+|+|.+.......         .+.+.+|+.++++++|+||+++++++...+..
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            34556779999999999985 457899999887543221         24578899999999999999999999999999


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      ++++||+++++|.+++..  ...+++..+..++.|++.||.+||+. +++|+||+|+||+++.++.++|+|||.++....
T Consensus        82 ~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lH~~-~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~  158 (267)
T cd06628          82 NIFLEYVPGGSVAALLNN--YGAFEETLVRNFVRQILKGLNYLHNR-GIIHRDIKGANILVDNKGGIKISDFGISKKLEA  158 (267)
T ss_pred             EEEEEecCCCCHHHHHHh--ccCccHHHHHHHHHHHHHHHHHHHhc-CcccccCCHHHEEEcCCCCEEecccCCCccccc
Confidence            999999999999999963  35688899999999999999999999 999999999999999999999999999875542


Q ss_pred             C----------CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          209 G----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       209 ~----------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      .          ....++..|+|||.+.+..++.++|+||||+++++|++|+.||...
T Consensus       159 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  215 (267)
T cd06628         159 NSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDC  215 (267)
T ss_pred             ccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCc
Confidence            1          1234678899999999888999999999999999999999998653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=7.2e-36  Score=247.78  Aligned_cols=195  Identities=23%  Similarity=0.312  Sum_probs=169.5

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      |++.+.||.|++|.||++.+ .++..|++|++....  ......+.+|+.++++++|+||+++++++......++|+||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   81 (286)
T cd07832           2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM   81 (286)
T ss_pred             ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence            67788899999999999995 568899999997654  233467889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC-----
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----  210 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-----  210 (264)
                       +++|.+++.. ....+++.++..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.......     
T Consensus        82 -~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~  158 (286)
T cd07832          82 -PSDLSEVLRD-EERPLPEAQVKSYMRMLLKGVAYMHAN-GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYS  158 (286)
T ss_pred             -CCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccc
Confidence             9999998864 346789999999999999999999999 99999999999999999999999999987654332     


Q ss_pred             cccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ...++..|+|||++.+.. ++.++||||||++++||++|.++|....
T Consensus       159 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~  205 (286)
T cd07832         159 HQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEN  205 (286)
T ss_pred             cccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCC
Confidence            345678899999987654 6889999999999999999988776543

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=9.9e-36  Score=248.03  Aligned_cols=197  Identities=23%  Similarity=0.333  Sum_probs=167.1

Q ss_pred             cccccccCCCCCCCeEEEEEeC------CCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcce
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~  129 (264)
                      .+++++.||+|+||.||++...      ....+|+|.+.... ......+.+|+++++++ +|+||+++++++......+
T Consensus        13 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~   92 (293)
T cd05053          13 RLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLY   92 (293)
T ss_pred             HeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeE
Confidence            3667788899999999999853      23689999988643 23345688999999999 7999999999999988999


Q ss_pred             EEEecCCCCCHHHhhhcC--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCe
Q 024659          130 LVAEYMPNDTLAKHLFHW--------------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP  195 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~--------------~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~  195 (264)
                      ++|||+++++|.+++...              ....+++..++.++.|++.||.|||++ +++|+||||+||++++++.+
T Consensus        93 li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivH~dlkp~Nil~~~~~~~  171 (293)
T cd05053          93 VVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK-KCIHRDLAARNVLVTEDHVM  171 (293)
T ss_pred             EEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC-CccccccceeeEEEcCCCeE
Confidence            999999999999998532              234678899999999999999999999 99999999999999999999


Q ss_pred             EEcccCCCcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          196 RLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       196 kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      +|+|||+++......      ...++..|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus       172 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~  238 (293)
T cd05053         172 KIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI  238 (293)
T ss_pred             EeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCC
Confidence            999999987654322      1223467999999988889999999999999999997 88887654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=1.9e-37  Score=246.39  Aligned_cols=200  Identities=16%  Similarity=0.203  Sum_probs=169.6

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CC----CCEEEEEEeCCCCCh--hHHHHHHHHHHHhcCCCCCccccceeeEe-CCcc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-EN----QFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCE-GDER  128 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~----~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~  128 (264)
                      ..|+.++.||+|+||.||++.. +.    .+.+|+|.+..+...  -....-+|+.+++.++|+|++.+..++.. +...
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v  103 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV  103 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence            4588999999999999999963 22    347899999865322  23567789999999999999999999877 7789


Q ss_pred             eEEEecCCCCCHHHhhhcC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC----CCeEEcccC
Q 024659          129 LLVAEYMPNDTLAKHLFHW---ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD----VNPRLSCFG  201 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~----~~~kl~dfg  201 (264)
                      ++++||.++ +|.+.++..   ..+.++...+..|+.||+.|++|||++ =++||||||.||++..+    |.+||+|||
T Consensus       104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N-WvlHRDLKPaNIlvmgdgperG~VKIaDlG  181 (438)
T KOG0666|consen  104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN-WVLHRDLKPANILVMGDGPERGRVKIADLG  181 (438)
T ss_pred             EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh-heeeccCCcceEEEeccCCccCeeEeeccc
Confidence            999999988 599888632   345788899999999999999999999 79999999999999765    999999999


Q ss_pred             CCcccCCC-------CcccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCCccc
Q 024659          202 LMKNSRDG-------RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHVSS  258 (264)
Q Consensus       202 ~~~~~~~~-------~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~~~~  258 (264)
                      +++...++       .....|..|+|||.+.+.. ||...||||.||++.||++-+++|.+...+
T Consensus       182 laR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k  246 (438)
T KOG0666|consen  182 LARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEK  246 (438)
T ss_pred             HHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhh
Confidence            99976544       3345689999999999887 999999999999999999999999765443

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=7.2e-36  Score=245.93  Aligned_cols=192  Identities=22%  Similarity=0.288  Sum_probs=156.6

Q ss_pred             ccCCCCCCCeEEEEEeCC---CCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCC
Q 024659           63 SEHGEKAPNVVYKGKLEN---QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND  138 (264)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  138 (264)
                      ++||+|+||.||+|...+   ...+++|.+..... .....+.+|++.++.++|+||+++++.+.+....++||||++++
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG   80 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence            367999999999997433   45788888765432 22446788999999999999999999999989999999999999


Q ss_pred             CHHHhhhcCCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC------
Q 024659          139 TLAKHLFHWET---QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------  209 (264)
Q Consensus       139 sL~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~------  209 (264)
                      +|.+++.....   ...++.....++.||+.||.|||+. +++||||||+||+++.++.+||+|||++......      
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~  159 (269)
T cd05042          81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA-DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITK  159 (269)
T ss_pred             cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc-CEecccccHhheEecCCCcEEEeccccccccccchheecc
Confidence            99999865321   2346778889999999999999999 9999999999999999999999999998653222      


Q ss_pred             CcccccccccccccccC-------CCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          210 RSYSTNLAFTPPEYLRT-------GRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~-------~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      ....++..|+|||++..       ..++.++||||||+++|||++ |..||...
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~  213 (269)
T cd05042         160 DCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDL  213 (269)
T ss_pred             CCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcC
Confidence            12234567999998743       346889999999999999999 66666543

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-35  Score=241.65  Aligned_cols=189  Identities=29%  Similarity=0.447  Sum_probs=164.4

Q ss_pred             cCCCCCCCeEEEEEeCCCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCCHHH
Q 024659           64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK  142 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~  142 (264)
                      .||+|+||.||++.+.+++.|++|.+...... ....+.+|++++++++|+||+++++++......++++||+++++|.+
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~   81 (251)
T cd05041           2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLT   81 (251)
T ss_pred             ccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHH
Confidence            57999999999999766899999998865543 45678899999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc------ccccc
Q 024659          143 HLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS------YSTNL  216 (264)
Q Consensus       143 ~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~------~~~~~  216 (264)
                      ++.. ....+++..+..++.+++.++.|||++ +++|+||+|+||+++.++.++|+|||++........      ...+.
T Consensus        82 ~l~~-~~~~~~~~~~~~~~~~~~~~l~~lH~~-~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~  159 (251)
T cd05041          82 FLRK-KKNRLTVKKLLQMSLDAAAGMEYLESK-NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPI  159 (251)
T ss_pred             HHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCccee
Confidence            9864 344678899999999999999999999 999999999999999999999999999875542211      12246


Q ss_pred             cccccccccCCCCCCccceechHHHHHHHHh-CCCCCCC
Q 024659          217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPS  254 (264)
Q Consensus       217 ~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~  254 (264)
                      .|+|||.+.++.++.++|+||||++++||++ |..||..
T Consensus       160 ~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~  198 (251)
T cd05041         160 KWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPG  198 (251)
T ss_pred             ccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCcc
Confidence            7999999988889999999999999999999 6777654

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=4.9e-36  Score=276.43  Aligned_cols=201  Identities=17%  Similarity=0.237  Sum_probs=167.2

Q ss_pred             CCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeC--Ccce
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL  129 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~  129 (264)
                      .+..|.+++.||.|+||.||++.+ ..+..+|+|.+....  ......+..|+.++++++||||+++++++...  ..++
T Consensus        11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly   90 (1021)
T PTZ00266         11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY   90 (1021)
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence            356789999999999999999995 457789999987543  22345688999999999999999999988653  4589


Q ss_pred             EEEecCCCCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCC------CceeeccCCCCeeeCC----------
Q 024659          130 LVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKE------RALYHDLNAYRIVFDD----------  191 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~~------~i~H~dl~~~Nil~~~----------  191 (264)
                      |||||+++++|.+++...  ....+++..++.|+.||+.||.|||+..      +|+|+||||+||||+.          
T Consensus        91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~  170 (1021)
T PTZ00266         91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA  170 (1021)
T ss_pred             EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence            999999999999988642  2356899999999999999999999841      5999999999999964          


Q ss_pred             -------CCCeEEcccCCCcccCCC---CcccccccccccccccC--CCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          192 -------DVNPRLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       192 -------~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~--~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                             .+.+||+|||++......   ....+++.|+|||++.+  ..++.++|||||||+||||++|+.||...
T Consensus       171 ~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~  246 (1021)
T PTZ00266        171 QANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA  246 (1021)
T ss_pred             cccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence                   245899999998765432   23467899999999864  34889999999999999999999999643

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=9.6e-36  Score=243.28  Aligned_cols=196  Identities=16%  Similarity=0.173  Sum_probs=171.3

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCC--CChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      |++++.||+|+||.+|++.. .+++.+++|.+...  .......+.+|++++++++|+||+++++++...+..++|+||+
T Consensus         2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08218           2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYC   81 (256)
T ss_pred             ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecC
Confidence            66788899999999999994 56889999998753  2233457889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC----c
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S  211 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~----~  211 (264)
                      .+++|.+.+.......+++.++..++.|++.|+.+||+. +++|+||+|+||+++.++.++|+|||++.......    .
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~  160 (256)
T cd08218          82 EGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELART  160 (256)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhh
Confidence            999999988654445678999999999999999999999 99999999999999999999999999987654332    2


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..++..|+|||++.+..++.++|+||||+++++|++|+.||...
T Consensus       161 ~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~  204 (256)
T cd08218         161 CIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG  204 (256)
T ss_pred             ccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC
Confidence            34678899999999888999999999999999999999998643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=9.8e-36  Score=249.62  Aligned_cols=196  Identities=17%  Similarity=0.159  Sum_probs=168.6

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC---hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      .|++++.||+|+||.||++.. ..++.|++|.+.....   .....+.+|+++++.++|+||+++++.+...+..++|+|
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   81 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME   81 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence            467788899999999999995 4578999999876532   234567889999999999999999999998889999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC-----
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-----  208 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~-----  208 (264)
                      |+++++|.+++..  ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||+++....     
T Consensus        82 ~~~g~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~  158 (305)
T cd05609          82 YVEGGDCATLLKN--IGALPVDMARMYFAETVLALEYLHNY-GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN  158 (305)
T ss_pred             cCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc
Confidence            9999999999963  35688999999999999999999999 999999999999999999999999998763110     


Q ss_pred             --------------CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 --------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 --------------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                                    .....++..|+|||.+....++.++|+||||+++|||++|..||.+..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~  220 (305)
T cd05609         159 LYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT  220 (305)
T ss_pred             ccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                          011245678999999988889999999999999999999999997543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=5.9e-36  Score=250.80  Aligned_cols=198  Identities=20%  Similarity=0.332  Sum_probs=166.0

Q ss_pred             ccccccccCCCCCCCeEEEEEeC--------CCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGD  126 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~  126 (264)
                      ..+.+.+.||+|+||.||++...        ++..+|+|.+.... ......+.+|+.+++.+ +|+||+++++++....
T Consensus        15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~   94 (304)
T cd05101          15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG   94 (304)
T ss_pred             HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCC
Confidence            34667788899999999999741        24578999987543 23456788999999999 8999999999999988


Q ss_pred             cceEEEecCCCCCHHHhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC
Q 024659          127 ERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD  192 (264)
Q Consensus       127 ~~~lv~e~~~~~sL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~  192 (264)
                      ..+++|||+++++|.+++....              ...+++.++..++.||+.||.|||++ |++|+||||+||+++.+
T Consensus        95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-givH~dlkp~Nili~~~  173 (304)
T cd05101          95 PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ-KCIHRDLAARNVLVTEN  173 (304)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC-CeeecccccceEEEcCC
Confidence            9999999999999999986421              23577888999999999999999999 99999999999999999


Q ss_pred             CCeEEcccCCCcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          193 VNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       193 ~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      +.++|+|||+++......      ...++..|+|||++.+..++.++||||||+++|+|++ |..||...
T Consensus       174 ~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~  243 (304)
T cd05101         174 NVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI  243 (304)
T ss_pred             CcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence            999999999987654321      1234567999999988889999999999999999998 67777543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=7.7e-36  Score=245.15  Aligned_cols=193  Identities=18%  Similarity=0.247  Sum_probs=167.8

Q ss_pred             ccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCC------hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW------PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      |.+.+.||.|+||.||++...+++.+|+|.+.....      .....+.+|++.+++++|+||+++++++...+..++++
T Consensus         2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   81 (265)
T cd06631           2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM   81 (265)
T ss_pred             ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence            456677899999999999988888999999875321      11345788999999999999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----  208 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----  208 (264)
                      ||+++++|.+++.+  ...+++..+..++.|++.||.+||+. +++|+||+|+||+++.++.++|+|||++.....    
T Consensus        82 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~  158 (265)
T cd06631          82 EFVPGGSISSILNR--FGPLPEPVFCKYTKQILDGVAYLHNN-CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH  158 (265)
T ss_pred             ecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc
Confidence            99999999999863  34688999999999999999999999 999999999999999999999999998865321    


Q ss_pred             ------CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          209 ------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       209 ------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                            .....++..|+|||++.+..++.++|+||||+++++|++|+.||..
T Consensus       159 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~  210 (265)
T cd06631         159 GTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLAS  210 (265)
T ss_pred             ccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCcccc
Confidence                  1123567889999999988899999999999999999999999864

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-35  Score=245.70  Aligned_cols=198  Identities=23%  Similarity=0.384  Sum_probs=167.9

Q ss_pred             ccccccccCCCCCCCeEEEEEeCC------CCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcce
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  129 (264)
                      +.+.+++.||.|+||.||++.+.+      +..+++|.+..... .....+.+|+++++.++|+||+++++++......+
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   85 (277)
T cd05032           6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL   85 (277)
T ss_pred             HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence            456788899999999999998542      46899999875532 33456889999999999999999999999999999


Q ss_pred             EEEecCCCCCHHHhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccC
Q 024659          130 LVAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG  201 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~--------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg  201 (264)
                      +++||+++++|.+++....        ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||
T Consensus        86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~di~p~nill~~~~~~kl~dfg  164 (277)
T cd05032          86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK-KFVHRDLAARNCMVAEDLTVKIGDFG  164 (277)
T ss_pred             EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccChheEEEcCCCCEEECCcc
Confidence            9999999999999986422        12467889999999999999999999 99999999999999999999999999


Q ss_pred             CCcccCCC------CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          202 LMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       202 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      +++.....      ....++..|+|||.+.+..++.++||||||+++||+++ |+.||...
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  225 (277)
T cd05032         165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGL  225 (277)
T ss_pred             cchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccC
Confidence            98754332      12234678999999988889999999999999999998 88887643

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=6.5e-36  Score=251.82  Aligned_cols=190  Identities=15%  Similarity=0.225  Sum_probs=156.5

Q ss_pred             cCCCCCCCeEEEEEeC---CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEe--CCcceEEEecCCCC
Q 024659           64 EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLLVAEYMPND  138 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~  138 (264)
                      +||+|+||.||++...   .+..+|+|.+.....  ...+.+|++++++++|+||+++++++..  ....++++||+.+ 
T Consensus         8 ~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-   84 (317)
T cd07867           8 KVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI--SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH-   84 (317)
T ss_pred             EeccCCCeeEEEEEecCCCccceEEEEEecCCCC--cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-
Confidence            5799999999999954   357899999876442  3457789999999999999999998854  4567899999865 


Q ss_pred             CHHHhhhcC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeee----CCCCCeEEcccCCCcccC
Q 024659          139 TLAKHLFHW-------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF----DDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       139 sL~~~l~~~-------~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~----~~~~~~kl~dfg~~~~~~  207 (264)
                      +|.+++...       ....+++..+..++.|++.||.|||+. +++||||||+||++    +.++.+||+|||+++...
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~  163 (317)
T cd07867          85 DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN  163 (317)
T ss_pred             cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC-CEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccC
Confidence            687776421       123578889999999999999999999 99999999999999    456789999999997653


Q ss_pred             CC-------CcccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          208 DG-------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       208 ~~-------~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                      ..       ....++..|+|||++.+. .++.++||||||+++|||++|++||.....
T Consensus       164 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~  221 (317)
T cd07867         164 SPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE  221 (317)
T ss_pred             CCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccc
Confidence            32       223567889999999764 489999999999999999999999975443

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=7.2e-36  Score=248.62  Aligned_cols=197  Identities=18%  Similarity=0.290  Sum_probs=167.3

Q ss_pred             CccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      .+.|++++.||.|++|.||++... +++.||+|.+...... ....+.+|++++++++|+||+++++++...+..++|+|
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE   83 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence            356788889999999999999954 6889999998754322 22446789999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----  209 (264)
                      |+++ +|.+++.. ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......    
T Consensus        84 ~~~~-~L~~~~~~-~~~~~~~~~~~~~~~ql~~al~~lH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~  160 (291)
T cd07844          84 YLDT-DLKQYMDD-CGGGLSMHNVRLFLFQLLRGLAYCHQR-RVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTY  160 (291)
T ss_pred             cCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecccCCHHHEEEcCCCCEEECccccccccCCCCccc
Confidence            9975 89988864 334788999999999999999999999 9999999999999999999999999998653321    


Q ss_pred             CcccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ....++..|+|||++.+. .++.++||||||+++|+|++|+.||...
T Consensus       161 ~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~  207 (291)
T cd07844         161 SNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGS  207 (291)
T ss_pred             cccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            222457789999998764 4889999999999999999999998644

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=1.1e-35  Score=245.93  Aligned_cols=194  Identities=16%  Similarity=0.272  Sum_probs=169.9

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      .|..+++||.|+||.||+|.+ .++..+|+|.+.... ......+.+|+.+++++.|+||+++++.+...+..++|+||+
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence            366778899999999999995 458899999987553 234567889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC----c
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S  211 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~----~  211 (264)
                      ++++|.+++.   ...+++.++..++.|++.|+.+||+. +++|+||+|+||+++.++.++++|||++.......    .
T Consensus        85 ~~~~L~~~i~---~~~l~~~~~~~~~~~l~~~l~~lh~~-~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  160 (277)
T cd06640          85 GGGSALDLLR---AGPFDEFQIATMLKEILKGLDYLHSE-KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT  160 (277)
T ss_pred             CCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CccCcCCChhhEEEcCCCCEEEcccccceeccCCcccccc
Confidence            9999999885   34688889999999999999999999 99999999999999999999999999987544322    2


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..++..|+|||++.+..++.++|+||||+++|||++|+.||...
T Consensus       161 ~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~  204 (277)
T cd06640         161 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDM  204 (277)
T ss_pred             ccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCc
Confidence            34677899999998888999999999999999999999998643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=1.5e-35  Score=244.05  Aligned_cols=200  Identities=17%  Similarity=0.166  Sum_probs=165.4

Q ss_pred             HHHHHHhCCCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcC-CCCCccccceeeEe
Q 024659           47 ETLRTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCE  124 (264)
Q Consensus        47 ~~~~~~~~~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~  124 (264)
                      .++....+++...+.++ +|+|+||.||++.. .++..+|+|.+........     |+.....+ +|+||+++++.+..
T Consensus         7 ~~~~~~~~~~~~~~~~~-lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~   80 (267)
T PHA03390          7 SELVQFLKNCEIVKKLK-LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTT   80 (267)
T ss_pred             HHHHHHHHhhcccccee-ecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEec
Confidence            33443444444444443 59999999999994 5688899999876432222     22222222 69999999999999


Q ss_pred             CCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC-CeEEcccCCC
Q 024659          125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLM  203 (264)
Q Consensus       125 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~-~~kl~dfg~~  203 (264)
                      .+..++||||+++++|.+++..  ...+++..+..++.|++.||.+||+. +++|+||+|+||+++.++ .++|+|||++
T Consensus        81 ~~~~~iv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~~l~dfg~~  157 (267)
T PHA03390         81 LKGHVLIMDYIKDGDLFDLLKK--EGKLSEAEVKKIIRQLVEALNDLHKH-NIIHNDIKLENVLYDRAKDRIYLCDYGLC  157 (267)
T ss_pred             CCeeEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence            9999999999999999999863  34789999999999999999999999 999999999999999888 9999999998


Q ss_pred             cccCCCCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          204 KNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       204 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..........++..|+|||++.+..++.++|+||||+++++|++|+.||...
T Consensus       158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~  209 (267)
T PHA03390        158 KIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKED  209 (267)
T ss_pred             eecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence            8776666677889999999999888999999999999999999999999744

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=2e-35  Score=243.38  Aligned_cols=195  Identities=22%  Similarity=0.367  Sum_probs=163.1

Q ss_pred             cccccCCCCCCCeEEEEEeCC----CCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCCc------
Q 024659           60 NIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE------  127 (264)
Q Consensus        60 ~~l~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~------  127 (264)
                      .+.+.||+|+||.||+|.+..    +..+|+|.+.....  .....+.+|++.++.++|+||+++++++.....      
T Consensus         2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   81 (273)
T cd05035           2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK   81 (273)
T ss_pred             ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence            466778999999999998532    36899999986432  334578899999999999999999998866443      


Q ss_pred             ceEEEecCCCCCHHHhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCC
Q 024659          128 RLLVAEYMPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~----~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~  203 (264)
                      .++++||+++++|..++...    ....+++..+..++.|++.||.|||+. +++|+||||+||++++++.+||+|||++
T Consensus        82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~dfg~~  160 (273)
T cd05035          82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR-NFIHRDLAARNCMLREDMTVCVADFGLS  160 (273)
T ss_pred             cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC-CeeccccchheEEECCCCeEEECCccce
Confidence            78999999999999887432    224688999999999999999999999 9999999999999999999999999998


Q ss_pred             cccCCCCc------ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          204 KNSRDGRS------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       204 ~~~~~~~~------~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      +.......      ...+..|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~  219 (273)
T cd05035         161 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGV  219 (273)
T ss_pred             eeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence            76543321      233567999999988889999999999999999999 77777543

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=1.1e-35  Score=242.75  Aligned_cols=195  Identities=27%  Similarity=0.402  Sum_probs=166.7

Q ss_pred             CccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      +..|++.+.||.|+||.||++.. .++.+|+|.+....  ..+.+.+|+.++++++|+|++++++++.. +..++++||+
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~v~e~~   80 (254)
T cd05083           5 LQKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELM   80 (254)
T ss_pred             HHHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC-CCcEEEEECC
Confidence            35577888899999999999875 45689999987543  34568899999999999999999999865 4579999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-Ccccc
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYST  214 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-~~~~~  214 (264)
                      ++++|.+++.......+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||++...... .....
T Consensus        81 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~  159 (254)
T cd05083          81 SKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK-KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKL  159 (254)
T ss_pred             CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCC
Confidence            999999999754445688999999999999999999999 9999999999999999999999999998764432 22234


Q ss_pred             cccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       215 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      +..|+|||++.+..++.++|+||||+++++|++ |..||...
T Consensus       160 ~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~  201 (254)
T cd05083         160 PVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKM  201 (254)
T ss_pred             CceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccC
Confidence            567999999988889999999999999999997 88887644

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=1e-36  Score=225.27  Aligned_cols=195  Identities=19%  Similarity=0.278  Sum_probs=169.8

Q ss_pred             ccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      |...++||+|.||+||+++ ++.++.||+|+++...  ..-.....+|+-+|+.++|.||++++++...++.+.+|+|||
T Consensus         4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c   83 (292)
T KOG0662|consen    4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC   83 (292)
T ss_pred             hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh
Confidence            4566788999999999999 7789999999998653  222456889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----Cc
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS  211 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~~  211 (264)
                      .. .|..+... .+..++.+.++.++.|+++||.++|+. +++|||+||.|.+|+.+|.+|+.|||+++-..-+    ..
T Consensus        84 dq-dlkkyfds-lng~~d~~~~rsfmlqllrgl~fchsh-nvlhrdlkpqnllin~ngelkladfglarafgipvrcysa  160 (292)
T KOG0662|consen   84 DQ-DLKKYFDS-LNGDLDPEIVRSFMLQLLRGLGFCHSH-NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSA  160 (292)
T ss_pred             hH-HHHHHHHh-cCCcCCHHHHHHHHHHHHhhhhhhhhh-hhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeec
Confidence            65 69888865 567889999999999999999999999 9999999999999999999999999999865543    23


Q ss_pred             ccccccccccccccCCC-CCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          212 YSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ...|..|++|.++.+.+ |+...|+||-||++.|+.. |.++|++..
T Consensus       161 evvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~d  207 (292)
T KOG0662|consen  161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND  207 (292)
T ss_pred             eeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCc
Confidence            46689999999999887 8999999999999999965 567777543

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=1.5e-35  Score=245.17  Aligned_cols=197  Identities=21%  Similarity=0.330  Sum_probs=165.4

Q ss_pred             cccccccCCCCCCCeEEEEEeC------CCCEEEEEEeCCCCChh-HHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      .+.+++.||+|++|.||++.+.      .+..|++|.+....... ...+.+|+.++++++|+||+++++++.+....++
T Consensus         7 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   86 (277)
T cd05036           7 SITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFI   86 (277)
T ss_pred             HcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEE
Confidence            3667788899999999999964      35688999887554332 3468889999999999999999999998888999


Q ss_pred             EEecCCCCCHHHhhhcCCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC---CeEEcccCC
Q 024659          131 VAEYMPNDTLAKHLFHWET-----QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSCFGL  202 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~-----~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~---~~kl~dfg~  202 (264)
                      ++||+++++|.+++.....     ..+++..+..++.||+.||.|||++ +++|+||+|+||+++.++   .++|+|||+
T Consensus        87 v~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~nil~~~~~~~~~~kl~dfg~  165 (277)
T cd05036          87 LLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN-HFIHRDIAARNCLLTCKGPGRVAKIADFGM  165 (277)
T ss_pred             EEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccchheEEEeccCCCcceEeccCcc
Confidence            9999999999999864321     2578999999999999999999999 999999999999998654   699999999


Q ss_pred             CcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          203 MKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       203 ~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      ++......      ....+..|+|||++.+..++.++|||||||++|||++ |..||...
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~  225 (277)
T cd05036         166 ARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGR  225 (277)
T ss_pred             ccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCC
Confidence            87653221      1223467999999998889999999999999999997 88888654

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=2.5e-35  Score=242.79  Aligned_cols=191  Identities=25%  Similarity=0.286  Sum_probs=158.5

Q ss_pred             cCCCCCCCeEEEEEeCC---CCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCC
Q 024659           64 EHGEKAPNVVYKGKLEN---QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT  139 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~s  139 (264)
                      .||+|+||.||+|.+.+   +..+++|.+..... .....+.+|+.++++++|+||+++++.+.+....++||||+++++
T Consensus         2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05087           2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD   81 (269)
T ss_pred             cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence            57999999999998543   45789998876543 233468889999999999999999999998888999999999999


Q ss_pred             HHHhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC------C
Q 024659          140 LAKHLFHWE---TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------R  210 (264)
Q Consensus       140 L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~------~  210 (264)
                      |.+++....   ....++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||++......      .
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~  160 (269)
T cd05087          82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN-NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPD  160 (269)
T ss_pred             HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC-CEeccccCcceEEEcCCCcEEECCccccccccCcceeecCC
Confidence            999986422   22456778889999999999999999 9999999999999999999999999998654322      1


Q ss_pred             cccccccccccccccCC-------CCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          211 SYSTNLAFTPPEYLRTG-------RVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~-------~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      ...++..|+|||++.+.       .++.++|+||||+++|||++ |+.||...
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~  213 (269)
T cd05087         161 QLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHL  213 (269)
T ss_pred             CcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCC
Confidence            23456789999998642       35789999999999999996 99888643

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=1.6e-35  Score=243.71  Aligned_cols=197  Identities=22%  Similarity=0.331  Sum_probs=167.1

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-C---CCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-N---QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      ..+++.+.||+|+||.||+|.+. +   +..+|+|.+..... ...+.+.+|+.++++++||||+++++++...+..+++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            34667788899999999999853 2   34789999876432 2345788999999999999999999999988999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS  211 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~  211 (264)
                      |||+++++|.+++.. ....+++.++..++.|++.|+.+||+. +++|+||||+||+++.++.++|+|||++........
T Consensus        84 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd05066          84 TEYMENGSLDAFLRK-HDGQFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE  161 (267)
T ss_pred             EEcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeehhhchhcEEECCCCeEEeCCCCcccccccccc
Confidence            999999999999864 334688999999999999999999999 999999999999999999999999999876543221


Q ss_pred             -------ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          212 -------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       212 -------~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                             ...+..|+|||++.+..++.++|+||||++++|+++ |..||...
T Consensus       162 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~  213 (267)
T cd05066         162 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEM  213 (267)
T ss_pred             eeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccC
Confidence                   112457999999998889999999999999999886 99888643

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=4.6e-36  Score=266.90  Aligned_cols=195  Identities=18%  Similarity=0.203  Sum_probs=155.7

Q ss_pred             CccccccccCCCCCCCeEEEEEeCC--CCEEEEE------------------EeCCCCChhHHHHHHHHHHHhcCCCCCc
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLEN--QFRIAVK------------------RFNRSAWPDARQFLEEARAVGQLRNRRL  115 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~--~~~vavK------------------~~~~~~~~~~~~~~~e~~~l~~l~h~~i  115 (264)
                      ...|+++++||+|+||+||++....  +...+.|                  .+.. .......+.+|++++++++|+||
T Consensus       147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~Ei~il~~l~HpnI  225 (501)
T PHA03210        147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKA-GSRAAIQLENEILALGRLNHENI  225 (501)
T ss_pred             hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhc-chHHHHHHHHHHHHHHhCCCCCc
Confidence            3568999999999999999987432  2222222                  1111 11223457899999999999999


Q ss_pred             cccceeeEeCCcceEEEecCCCCCHHHhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC
Q 024659          116 ANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD  192 (264)
Q Consensus       116 ~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~  192 (264)
                      +++++++...+..+++++++.+ +|.+++....   ........+..++.||+.||.|||++ +|+||||||+|||++.+
T Consensus       226 v~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~-gIiHrDLKP~NILl~~~  303 (501)
T PHA03210        226 LKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK-KLIHRDIKLENIFLNCD  303 (501)
T ss_pred             CcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCC
Confidence            9999999999999999999855 6777764321   11233566788999999999999999 99999999999999999


Q ss_pred             CCeEEcccCCCcccCCCC-----cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCC
Q 024659          193 VNPRLSCFGLMKNSRDGR-----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       193 ~~~kl~dfg~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                      +.+||+|||++.......     ...++..|+|||++.+..++.++|||||||++|||++|..++.
T Consensus       304 ~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~  369 (501)
T PHA03210        304 GKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPI  369 (501)
T ss_pred             CCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCc
Confidence            999999999997654322     2468899999999999899999999999999999999986554

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=1.7e-35  Score=243.30  Aligned_cols=194  Identities=19%  Similarity=0.226  Sum_probs=164.7

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC-----ChhHHHHHHHHHHHhcCCCCCccccceeeEeC--CcceE
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-----WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLL  130 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~l  130 (264)
                      |+..+.||+|+||.||++.. .++..+++|.+....     ......+.+|+.++++++|+||+++++++...  ...++
T Consensus         4 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   83 (266)
T cd06651           4 WRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTI   83 (266)
T ss_pred             ccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEE
Confidence            45566779999999999995 558899999986432     12345688899999999999999999988653  56789


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-  209 (264)
                      ++||+++++|.+++..  ...+++.....++.|++.||.+||+. +++|+||+|+||+++.++.++|+|||++...... 
T Consensus        84 ~~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~LH~~-~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~  160 (266)
T cd06651          84 FMEYMPGGSVKDQLKA--YGALTESVTRKYTRQILEGMSYLHSN-MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC  160 (266)
T ss_pred             EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEECCCCCEEEccCCCcccccccc
Confidence            9999999999999863  34588899999999999999999999 9999999999999999999999999998754321 


Q ss_pred             ------CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 ------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 ------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                            ....++..|+|||.+.+..++.++|+||||+++|||++|+.||...
T Consensus       161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~  212 (266)
T cd06651         161 MSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEY  212 (266)
T ss_pred             ccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCcccc
Confidence                  1234678899999999888999999999999999999999998643

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=1.3e-35  Score=247.07  Aligned_cols=197  Identities=21%  Similarity=0.301  Sum_probs=166.0

Q ss_pred             ccccccCCCCCCCeEEEEEeC------CCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           59 ENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      +++.+.||+|+||.||+|...      ....+++|.+..... .....+.+|+.+++.++||||+++++.+...+..+++
T Consensus         2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   81 (290)
T cd05045           2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI   81 (290)
T ss_pred             ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence            456778899999999999853      235788998876543 2345688999999999999999999999998999999


Q ss_pred             EecCCCCCHHHhhhcCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeee
Q 024659          132 AEYMPNDTLAKHLFHWE----------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF  189 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~----------------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~  189 (264)
                      +||+.+++|.+++....                      ...+++.+++.++.|++.||.|||+. +++|+||+|+||++
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~ivH~dikp~nill  160 (290)
T cd05045          82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM-KLVHRDLAARNVLV  160 (290)
T ss_pred             EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC-CeehhhhhhheEEE
Confidence            99999999999875321                      13578889999999999999999999 99999999999999


Q ss_pred             CCCCCeEEcccCCCcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          190 DDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       190 ~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ++++.++|+|||+++......      ...++..|+|||++.+..++.++||||||++++||++ |..||....
T Consensus       161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~  234 (290)
T cd05045         161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA  234 (290)
T ss_pred             cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC
Confidence            999999999999987543221      1234568999999988889999999999999999998 888886543

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=6e-36  Score=248.18  Aligned_cols=193  Identities=19%  Similarity=0.249  Sum_probs=164.3

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh--hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      |++++.||.|+||.||++.. .+|+.+++|.++.....  ....+.+|++++++++|+||+++++++.+....++++||+
T Consensus         2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (284)
T cd07839           2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC   81 (284)
T ss_pred             ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence            56778899999999999995 46889999999754321  2345778999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----Cc
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS  211 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~~  211 (264)
                      .+ +|.+++.. ....+++..++.++.||+.||.|||+. +++|+||+|+||+++.++.++|+|||++......    ..
T Consensus        82 ~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~-~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  158 (284)
T cd07839          82 DQ-DLKKYFDS-CNGDIDPEIVKSFMFQLLKGLAFCHSH-NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSA  158 (284)
T ss_pred             CC-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCC
Confidence            75 78887754 345689999999999999999999999 9999999999999999999999999998754332    22


Q ss_pred             ccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      ..++..|+|||++.+.. ++.++||||||+++|+|++|+.|+..
T Consensus       159 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~  202 (284)
T cd07839         159 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP  202 (284)
T ss_pred             CccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcC
Confidence            34578899999987654 78999999999999999999988643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=1.9e-35  Score=241.54  Aligned_cols=196  Identities=23%  Similarity=0.381  Sum_probs=168.8

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      +++++.+.||.|+||.||++.+.++..+++|.+..... ....+.+|++++++++|+|++++++++......++++||+.
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME   82 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence            45677888999999999999977677899999875432 34568899999999999999999999988889999999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC-----c
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S  211 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-----~  211 (264)
                      +++|.+++.. ....+++..+..++.|++.++.+||+. +++|+||+|+||+++.++.++|+|||++.......     .
T Consensus        83 ~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~  160 (256)
T cd05112          83 HGCLSDYLRA-QRGKFSQETLLGMCLDVCEGMAYLESS-NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTG  160 (256)
T ss_pred             CCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHC-CccccccccceEEEcCCCeEEECCCcceeecccCcccccCC
Confidence            9999998864 334678999999999999999999999 99999999999999999999999999887543221     1


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      ...+..|+|||++.++.++.++|+||||+++|||++ |..||...
T Consensus       161 ~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~  205 (256)
T cd05112         161 TKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENR  205 (256)
T ss_pred             CccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcC
Confidence            233568999999988889999999999999999998 88888643

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=8.9e-36  Score=243.83  Aligned_cols=195  Identities=21%  Similarity=0.217  Sum_probs=172.1

Q ss_pred             ccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCC---hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      |++++.||.|+||.||++.+. ++..+++|.+.....   ...+.+.+|++++++++||||+++++.+...+..++|+||
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   81 (258)
T cd05578           2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDL   81 (258)
T ss_pred             ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeC
Confidence            567788899999999999965 588999999975432   2356788999999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---Cc
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RS  211 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---~~  211 (264)
                      +.+++|.+++..  ...+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++......   ..
T Consensus        82 ~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~  158 (258)
T cd05578          82 LLGGDLRYHLSQ--KVKFSEEQVKFWICEIVLALEYLHSK-GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTS  158 (258)
T ss_pred             CCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccc
Confidence            999999999863  35788999999999999999999999 9999999999999999999999999998765443   33


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ..++..|+|||.+.+..++.++|+||||+++|+|++|..||....
T Consensus       159 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~  203 (258)
T cd05578         159 TSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHS  203 (258)
T ss_pred             cCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCC
Confidence            456788999999988889999999999999999999999987654

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=6.3e-37  Score=239.61  Aligned_cols=200  Identities=19%  Similarity=0.247  Sum_probs=170.5

Q ss_pred             ccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCC-CChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEEEe
Q 024659           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS-AWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      .+.+.++.||.|+-|.|++.+ ...|..+|||.++.. +.++.+++...+.++.+. +.|+|++.+|+|..+...++.||
T Consensus        92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe  171 (391)
T KOG0983|consen   92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME  171 (391)
T ss_pred             HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence            445678889999999999999 556889999999865 445566788888877666 48999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC---
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~---  210 (264)
                      .+.. -++.++++ ..+++++..+-++...+++||.||.++++++|||+||+|||+|+.|++||+|||++....+..   
T Consensus       172 lMs~-C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAht  249 (391)
T KOG0983|consen  172 LMST-CAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHT  249 (391)
T ss_pred             HHHH-HHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccccc
Confidence            8855 37776654 566899999999999999999999999899999999999999999999999999988765443   


Q ss_pred             cccccccccccccccCC---CCCCccceechHHHHHHHHhCCCCCCCCccc
Q 024659          211 SYSTNLAFTPPEYLRTG---RVTPESVMYSFGTLLLDLLSGKHIPPSHVSS  258 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~---~~~~~~DiwslG~~l~el~~g~~~~~~~~~~  258 (264)
                      ...|.+.|||||-+.-.   .|+.++||||||++|+||.||+.||.....+
T Consensus       250 rsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td  300 (391)
T KOG0983|consen  250 RSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD  300 (391)
T ss_pred             cccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc
Confidence            34677899999998643   4899999999999999999999999875554

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=2.1e-35  Score=242.80  Aligned_cols=193  Identities=18%  Similarity=0.256  Sum_probs=165.9

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC------hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW------PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      |+..+.||+|++|.||++.. .+++.+|+|.+.....      ...+.+.+|+.++++++|+||+++++++.+.+..++|
T Consensus         2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v   81 (268)
T cd06630           2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLF   81 (268)
T ss_pred             ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEE
Confidence            34455679999999999994 6688999999875331      1245688999999999999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC-CeEEcccCCCcccCCC-
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~-~~kl~dfg~~~~~~~~-  209 (264)
                      +||+++++|.+++..  ...+++..+..++.|++.||.+||++ +++|+||+|+||+++.++ .++|+|||.+...... 
T Consensus        82 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~al~~LH~~-~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~  158 (268)
T cd06630          82 VEWMAGGSVSHLLSK--YGAFKEAVIINYTEQLLRGLSYLHEN-QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKG  158 (268)
T ss_pred             EeccCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEEccccccccccccc
Confidence            999999999999863  45688999999999999999999999 999999999999998775 6999999998754432 


Q ss_pred             -------CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          210 -------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       210 -------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                             ....++..|+|||.+.+..++.++|+||||+++++|++|..||..
T Consensus       159 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~  210 (268)
T cd06630         159 TGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNA  210 (268)
T ss_pred             ccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence                   123467789999999888899999999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=3.3e-35  Score=239.95  Aligned_cols=196  Identities=18%  Similarity=0.197  Sum_probs=170.3

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      |++++.||+|++|.||++.. .+++.+++|.+....  ......+.+|+++++.++|+|++++++.+...+..++|+||+
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08220           2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYA   81 (256)
T ss_pred             ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecC
Confidence            56778889999999999995 568899999987643  233567889999999999999999999998888999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC-CCeEEcccCCCcccCCC---Cc
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSRDG---RS  211 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~-~~~kl~dfg~~~~~~~~---~~  211 (264)
                      ++++|.+++.......+++..+..++.|++.++.+||++ +++|+||+|+||+++++ +.++|+|||.+......   ..
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~  160 (256)
T cd08220          82 PGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK-LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYT  160 (256)
T ss_pred             CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccc
Confidence            999999999754455689999999999999999999999 99999999999999855 56899999998765432   22


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..++..|+|||.+.+..++.++|+||||+++++|++|+.||...
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~  204 (256)
T cd08220         161 VVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAA  204 (256)
T ss_pred             cccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccC
Confidence            45678899999999888999999999999999999999998653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=2.8e-35  Score=245.60  Aligned_cols=197  Identities=22%  Similarity=0.323  Sum_probs=167.0

Q ss_pred             ccccccccCCCCCCCeEEEEEeCC-----------------CCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCcccc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLEN-----------------QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANL  118 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~  118 (264)
                      ..|+++++||+|+||.||++...+                 +..||+|.+..... .....+.+|++++++++|+||+++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~   84 (296)
T cd05051           5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL   84 (296)
T ss_pred             hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence            357888999999999999988542                 24689999886543 335578899999999999999999


Q ss_pred             ceeeEeCCcceEEEecCCCCCHHHhhhcCC---------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeee
Q 024659          119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF  189 (264)
Q Consensus       119 ~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~  189 (264)
                      ++++......++++||+++++|.+++....         ...+++..++.++.|++.||.|||+. +++|+||||+||++
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~-~i~H~dlkp~Nili  163 (296)
T cd05051          85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL-NFVHRDLATRNCLV  163 (296)
T ss_pred             EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc-Cccccccchhceee
Confidence            999999899999999999999999986432         12688999999999999999999999 99999999999999


Q ss_pred             CCCCCeEEcccCCCcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh--CCCCCCC
Q 024659          190 DDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS--GKHIPPS  254 (264)
Q Consensus       190 ~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~--g~~~~~~  254 (264)
                      +.++.++|+|||++.......      ...++..|+|||++.+..++.++||||||+++|||++  +..||..
T Consensus       164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~  236 (296)
T cd05051         164 GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEH  236 (296)
T ss_pred             cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCC
Confidence            999999999999987543321      2234678999999988889999999999999999998  5566643

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=3.5e-35  Score=247.24  Aligned_cols=197  Identities=22%  Similarity=0.345  Sum_probs=165.3

Q ss_pred             cccccccCCCCCCCeEEEEEeC--------CCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCc
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDE  127 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~  127 (264)
                      .+.+.+.||+|+||.||++...        ....+|+|.+.... ......+.+|+++++++ +|+||+++++++...+.
T Consensus        13 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~   92 (314)
T cd05099          13 RLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGP   92 (314)
T ss_pred             HeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCc
Confidence            4667888999999999999742        24578999987543 23345688999999999 69999999999998888


Q ss_pred             ceEEEecCCCCCHHHhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC
Q 024659          128 RLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV  193 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~  193 (264)
                      .++++||+++++|.+++....              ...+++.++..++.|++.||.|||+. |++|+||||+||++++++
T Consensus        93 ~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~-gi~H~dlkp~Nill~~~~  171 (314)
T cd05099          93 LYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR-RCIHRDLAARNVLVTEDN  171 (314)
T ss_pred             eEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC-CeeeccccceeEEEcCCC
Confidence            999999999999999986422              23578889999999999999999999 999999999999999999


Q ss_pred             CeEEcccCCCcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          194 NPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       194 ~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      .+||+|||+++......      ...++..|+|||++.+..++.++||||||+++|+|++ |..||...
T Consensus       172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~  240 (314)
T cd05099         172 VMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGI  240 (314)
T ss_pred             cEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCC
Confidence            99999999997654321      1123357999999988889999999999999999999 77777543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=3.4e-35  Score=240.95  Aligned_cols=194  Identities=19%  Similarity=0.261  Sum_probs=170.0

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh--hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      |.+.+.||.|+||.||++.. .++..+++|.++.....  ....+.+|++++++++|+||+++++.+...+..++++||+
T Consensus         2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (264)
T cd06626           2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC   81 (264)
T ss_pred             ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence            56778889999999999995 46889999999866543  5667899999999999999999999998889999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC-----
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----  210 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-----  210 (264)
                      ++++|.+++..  ...+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||++.......     
T Consensus        82 ~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~-~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~  158 (264)
T cd06626          82 SGGTLEELLEH--GRILDEHVIRVYTLQLLEGLAYLHSH-GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGE  158 (264)
T ss_pred             CCCcHHHHHhh--cCCCChHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccc
Confidence            99999999863  34578889999999999999999999 99999999999999999999999999987654322     


Q ss_pred             ---cccccccccccccccCCC---CCCccceechHHHHHHHHhCCCCCCCC
Q 024659          211 ---SYSTNLAFTPPEYLRTGR---VTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       211 ---~~~~~~~y~aPE~~~~~~---~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                         ...++..|+|||++.+..   ++.++||||||++++++++|+.||...
T Consensus       159 ~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~  209 (264)
T cd06626         159 EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSEL  209 (264)
T ss_pred             cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCC
Confidence               234578899999998766   889999999999999999999999643

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=2e-35  Score=246.60  Aligned_cols=197  Identities=22%  Similarity=0.330  Sum_probs=164.8

Q ss_pred             ccccccccCCCCCCCeEEEEEeCC---------------CCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccce
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLEN---------------QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLG  120 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~  120 (264)
                      .+|++.++||+|+||.||++...+               ...||+|.++..... ....+.+|++++++++|+|++++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            357888899999999999987532               235899999865322 3456889999999999999999999


Q ss_pred             eeEeCCcceEEEecCCCCCHHHhhhcCC----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeC
Q 024659          121 CCCEGDERLLVAEYMPNDTLAKHLFHWE----------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD  190 (264)
Q Consensus       121 ~~~~~~~~~lv~e~~~~~sL~~~l~~~~----------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~  190 (264)
                      ++...+..++||||+++++|.+++....          ...+++..++.++.|++.||.|||+. +++|+||||+||+++
T Consensus        85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~H~dlkp~Nill~  163 (295)
T cd05097          85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL-NFVHRDLATRNCLVG  163 (295)
T ss_pred             EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc-CeeccccChhhEEEc
Confidence            9999999999999999999999885321          12367888999999999999999999 999999999999999


Q ss_pred             CCCCeEEcccCCCcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh--CCCCCCC
Q 024659          191 DDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS--GKHIPPS  254 (264)
Q Consensus       191 ~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~--g~~~~~~  254 (264)
                      +++.+||+|||++.......      ...++..|+|||++.+..++.++|+||||+++++|++  +..||..
T Consensus       164 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~  235 (295)
T cd05097         164 NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSL  235 (295)
T ss_pred             CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence            99999999999987543321      1233568999999988889999999999999999998  4556653

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.1e-35  Score=242.74  Aligned_cols=196  Identities=20%  Similarity=0.298  Sum_probs=166.6

Q ss_pred             cccccccCCCCCCCeEEEEEeC-CC----CEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-NQ----FRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-~~----~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      ++++++.||+|+||.||+|.+. ++    ..+++|.+...... ....+.+|+..+++++|+||+++++++.. ...+++
T Consensus         8 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v   86 (279)
T cd05057           8 ELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLI   86 (279)
T ss_pred             HcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEE
Confidence            4677888999999999999853 33    25899988766432 34578899999999999999999999976 788999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS  211 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~  211 (264)
                      +||+++++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++........
T Consensus        87 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~-~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~  164 (279)
T cd05057          87 TQLMPLGCLLDYVRN-HKDNIGSQYLLNWCVQIAKGMSYLEEK-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK  164 (279)
T ss_pred             EecCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhC-CEEecccCcceEEEcCCCeEEECCCcccccccCccc
Confidence            999999999999864 334689999999999999999999999 999999999999999999999999999876543322


Q ss_pred             ------ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          212 ------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       212 ------~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                            ...+..|+|||.+....++.++|+||||++++|+++ |+.||....
T Consensus       165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~  216 (279)
T cd05057         165 EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIP  216 (279)
T ss_pred             ceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCC
Confidence                  112467999999988889999999999999999998 999886543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=3.1e-35  Score=241.96  Aligned_cols=195  Identities=22%  Similarity=0.317  Sum_probs=165.1

Q ss_pred             ccccccCCCCCCCeEEEEEeC-CC---CEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           59 ENIVSEHGEKAPNVVYKGKLE-NQ---FRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      ++..+.||+|+||.||++.+. ++   ..+++|.+.... ....+.+.+|++++++++|+|++++.+++...+..+++||
T Consensus         7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (268)
T cd05063           7 ITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITE   86 (268)
T ss_pred             ceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEE
Confidence            445667799999999999964 33   378999987653 2335568899999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc--
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS--  211 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~--  211 (264)
                      |+++++|.+++.. ....+++.++..++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||++........  
T Consensus        87 ~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~  164 (268)
T cd05063          87 YMENGALDKYLRD-HDGEFSSYQLVGMLRGIAAGMKYLSDM-NYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGT  164 (268)
T ss_pred             cCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhhEEEcCCCcEEECCCccceecccccccc
Confidence            9999999999864 345689999999999999999999999 999999999999999999999999999875432211  


Q ss_pred             -----ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          212 -----YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       212 -----~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                           ...+..|+|||++....++.++||||||+++|||++ |+.||...
T Consensus       165 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~  214 (268)
T cd05063         165 YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDM  214 (268)
T ss_pred             eeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcC
Confidence                 112356999999988889999999999999999997 99888543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.5e-35  Score=241.44  Aligned_cols=191  Identities=17%  Similarity=0.160  Sum_probs=163.1

Q ss_pred             ccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh---hHHHHHHHHHH-HhcCCCCCccccceeeEeCCcceEEEecCCC
Q 024659           63 SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARA-VGQLRNRRLANLLGCCCEGDERLLVAEYMPN  137 (264)
Q Consensus        63 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~-l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  137 (264)
                      +.||.|+||.||+|.. .+++.||+|.+......   ....+..|... ....+|+|++++++++...+..++|+||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            5679999999999995 55889999998754321   12233444444 4455899999999999998999999999999


Q ss_pred             CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCccccccc
Q 024659          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA  217 (264)
Q Consensus       138 ~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  217 (264)
                      ++|.+++..  ...+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++..........++..
T Consensus        82 ~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  158 (260)
T cd05611          82 GDCASLIKT--LGGLPEDWAKQYIAEVVLGVEDLHQR-GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPD  158 (260)
T ss_pred             CCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcC
Confidence            999999863  35688999999999999999999999 999999999999999999999999999887655556678889


Q ss_pred             ccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       218 y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      |+|||.+.+..++.++|+||||+++|+|++|..||....
T Consensus       159 y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~  197 (260)
T cd05611         159 YLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET  197 (260)
T ss_pred             ccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCC
Confidence            999999988888999999999999999999999986543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=3.9e-35  Score=241.79  Aligned_cols=194  Identities=23%  Similarity=0.364  Sum_probs=160.6

Q ss_pred             ccccCCCCCCCeEEEEEeCC-C--CEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeC------Ccce
Q 024659           61 IVSEHGEKAPNVVYKGKLEN-Q--FRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG------DERL  129 (264)
Q Consensus        61 ~l~~lg~G~~g~Vy~~~~~~-~--~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~~  129 (264)
                      +.+.||+|+||.||+|.+.+ +  ..+|+|.+....  ....+.+.+|+++++.++|+||+++++++...      ...+
T Consensus         3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   82 (272)
T cd05075           3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPV   82 (272)
T ss_pred             cccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcE
Confidence            44678999999999999654 3  268999887542  33456788999999999999999999987532      2468


Q ss_pred             EEEecCCCCCHHHhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcc
Q 024659          130 LVAEYMPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~----~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~  205 (264)
                      +++||+++++|.+++...    ....+++..+..++.|++.||.|||++ +++||||||+||++++++.++|+|||+++.
T Consensus        83 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  161 (272)
T cd05075          83 VILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK-SFIHRDLAARNCMLNENMNVCVADFGLSKK  161 (272)
T ss_pred             EEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhheEEcCCCCEEECCCCcccc
Confidence            999999999999887421    234578999999999999999999999 999999999999999999999999999886


Q ss_pred             cCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          206 SRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       206 ~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      .....      ...++..|+|||+..+..++.++||||||+++|||++ |+.||...
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~  218 (272)
T cd05075         162 IYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGV  218 (272)
T ss_pred             cCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence            54322      2234578999999998889999999999999999999 78887643

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=4.6e-35  Score=243.24  Aligned_cols=196  Identities=18%  Similarity=0.272  Sum_probs=171.4

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      ..|+....+|+|.+|.||++.+. ++..+++|.+..... ..+.+.+|++.++.++|+|++++++.+...+..++++||+
T Consensus        19 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   97 (286)
T cd06614          19 ELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYM   97 (286)
T ss_pred             ccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEecc
Confidence            34566677899999999999965 678999999986553 4567889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----Cc
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS  211 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~~  211 (264)
                      ++++|.+++.... ..+++..+..++.|++.||.+||+. |++|+||+|+||+++.++.++|+|||++......    ..
T Consensus        98 ~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~-gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~  175 (286)
T cd06614          98 DGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQ-NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNS  175 (286)
T ss_pred             CCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhcc
Confidence            9999999997422 3789999999999999999999999 9999999999999999999999999987654332    22


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..++..|+|||.+.+..++.++|+||||+++|+|++|+.||...
T Consensus       176 ~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~  219 (286)
T cd06614         176 VVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLRE  219 (286)
T ss_pred             ccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCC
Confidence            34678899999998888999999999999999999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=3e-35  Score=244.72  Aligned_cols=197  Identities=25%  Similarity=0.393  Sum_probs=164.3

Q ss_pred             ccccccccCCCCCCCeEEEEEeC------CCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcce
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  129 (264)
                      +.|++++.||+|+||.||+|...      .+..||+|.+..... .....+.+|+.+++.++|+||+++++++...+..+
T Consensus         6 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   85 (288)
T cd05061           6 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL   85 (288)
T ss_pred             HHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcE
Confidence            45778889999999999999743      245899999875432 23345788999999999999999999999888999


Q ss_pred             EEEecCCCCCHHHhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccC
Q 024659          130 LVAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG  201 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~--------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg  201 (264)
                      ++|||+++++|.+++....        ....++..+..++.|++.||.|||++ +++|+||||+||++++++.++|+|||
T Consensus        86 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dikp~nili~~~~~~~L~Dfg  164 (288)
T cd05061          86 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFG  164 (288)
T ss_pred             EEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcCCCCChheEEEcCCCcEEECcCC
Confidence            9999999999999996421        12345678889999999999999999 99999999999999999999999999


Q ss_pred             CCcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCC
Q 024659          202 LMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPS  254 (264)
Q Consensus       202 ~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~  254 (264)
                      +++......      ...++..|+|||.+.+..++.++|+||||++++||++ |..||..
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~  224 (288)
T cd05061         165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG  224 (288)
T ss_pred             ccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCC
Confidence            987543221      1233567999999998889999999999999999998 6777754

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=3.9e-35  Score=240.82  Aligned_cols=197  Identities=20%  Similarity=0.289  Sum_probs=171.2

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      .|++.+.||.|+||.||++.. .++..+++|++.... ......+.+|++.++.++|+|++++++.+...+..++++|++
T Consensus         2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~   81 (267)
T cd06610           2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL   81 (267)
T ss_pred             cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence            467788899999999999994 568899999997543 234567899999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC----
Q 024659          136 PNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----  210 (264)
Q Consensus       136 ~~~sL~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~----  210 (264)
                      ++++|.+++..... ..+++..+..++.|++.|+.+||+. +++|+||+|+||++++++.++|+|||++.......    
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~-~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~  160 (267)
T cd06610          82 SGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN-GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR  160 (267)
T ss_pred             CCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc
Confidence            99999999864322 5689999999999999999999999 99999999999999999999999999987544322    


Q ss_pred             ----cccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          211 ----SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       211 ----~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                          ...++..|+|||++... .++.++|+||||+++++|++|+.||...
T Consensus       161 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~  210 (267)
T cd06610         161 KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKY  210 (267)
T ss_pred             cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCcccc
Confidence                22467889999999877 6899999999999999999999998643

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=2.2e-35  Score=255.41  Aligned_cols=196  Identities=21%  Similarity=0.343  Sum_probs=164.8

Q ss_pred             cccccccCCCCCCCeEEEEEeC------CCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCC-CCCccccceeeEeCCcce
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLR-NRRLANLLGCCCEGDERL  129 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~  129 (264)
                      .+.+.+.||+|+||.||++++.      .++.||+|+++..... ..+.+.+|+.++.++. |+||+++++++......+
T Consensus        38 ~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~  117 (401)
T cd05107          38 NLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIY  117 (401)
T ss_pred             HeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcE
Confidence            3567788999999999999853      2468999999865322 2456889999999997 999999999999988999


Q ss_pred             EEEecCCCCCHHHhhhcCCC------------------------------------------------------------
Q 024659          130 LVAEYMPNDTLAKHLFHWET------------------------------------------------------------  149 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~------------------------------------------------------------  149 (264)
                      +|+||+.+|+|.+++.....                                                            
T Consensus       118 iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (401)
T cd05107         118 IITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKG  197 (401)
T ss_pred             EEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchh
Confidence            99999999999999864211                                                            


Q ss_pred             ------------------------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC
Q 024659          150 ------------------------------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV  193 (264)
Q Consensus       150 ------------------------------------~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~  193 (264)
                                                          ..+++..+..++.|++.||.|||+. +++|+||||+||++++++
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrdlkp~NiLl~~~~  276 (401)
T cd05107         198 TVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK-NCVHRDLAARNVLICEGK  276 (401)
T ss_pred             hhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CcCcccCCcceEEEeCCC
Confidence                                                2356677889999999999999999 999999999999999999


Q ss_pred             CeEEcccCCCcccCCC------CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCC
Q 024659          194 NPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPS  254 (264)
Q Consensus       194 ~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~  254 (264)
                      .++|+|||+++.....      ....++..|+|||.+.+..++.++||||||++++||++ |+.||..
T Consensus       277 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~  344 (401)
T cd05107         277 LVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPE  344 (401)
T ss_pred             EEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCC
Confidence            9999999998754221      12245678999999988889999999999999999998 7888754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=2.4e-35  Score=246.24  Aligned_cols=195  Identities=22%  Similarity=0.229  Sum_probs=165.9

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh-----hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-----DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      |++++.||.|++|.||+|.. .+++.|++|.+......     ....+.+|++++++++|+||+++++++.+.+..++|+
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF   81 (298)
T ss_pred             ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence            55677889999999999995 46889999999765422     2345678999999999999999999999988999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC--
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--  210 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~--  210 (264)
                      ||+ +++|.+++.. ....+++..+..++.||+.||.|||++ +++|+||+|+||+++.++.++|+|||++.......  
T Consensus        82 e~~-~~~L~~~i~~-~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~  158 (298)
T cd07841          82 EFM-ETDLEKVIKD-KSIVLTPADIKSYMLMTLRGLEYLHSN-WILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK  158 (298)
T ss_pred             ccc-CCCHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCChhhEEEcCCCCEEEccceeeeeccCCCcc
Confidence            999 8899999864 223689999999999999999999999 99999999999999999999999999987654332  


Q ss_pred             --cccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 --SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 --~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                        ....+..|+|||.+.+. .++.++|+||||++++||++|.++|....
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~  207 (298)
T cd07841         159 MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDS  207 (298)
T ss_pred             ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCc
Confidence              22346789999998654 57889999999999999999987776443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=2.3e-35  Score=245.65  Aligned_cols=196  Identities=19%  Similarity=0.225  Sum_probs=165.0

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChh-HHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      ..|.+++.||+|+||.||++.. .++..+++|.+....... ...+.+|+++++.++|+||+++++++...+..++|+||
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEY   84 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEec
Confidence            4577888899999999999985 568899999997543222 34577899999999999999999999988899999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----C
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R  210 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~  210 (264)
                      +. ++|.+.+.. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++.....    .
T Consensus        85 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  161 (291)
T cd07870          85 MH-TDLAQYMIQ-HPGGLHPYNVRLFMFQLLRGLAYIHGQ-HILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYS  161 (291)
T ss_pred             cc-CCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCC
Confidence            96 577776643 234577888899999999999999999 9999999999999999999999999998754322    2


Q ss_pred             cccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ...++..|+|||++.+. .++.++|+||||+++++|++|..||...
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~  207 (291)
T cd07870         162 SEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGV  207 (291)
T ss_pred             CccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCc
Confidence            23457889999998764 4788999999999999999999998643

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=1.3e-35  Score=246.30  Aligned_cols=196  Identities=20%  Similarity=0.279  Sum_probs=167.5

Q ss_pred             cccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCCh--hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      .|++++.||.|+||.||++.+. +++.+|+|.+......  ..+.+.+|+++++.++|+||+++++++...+..++++||
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   81 (286)
T cd07846           2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF   81 (286)
T ss_pred             ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence            4678888999999999999964 5889999998654322  245678899999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----C
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R  210 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~  210 (264)
                      +++++|..+..  ....+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++......    .
T Consensus        82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~  158 (286)
T cd07846          82 VDHTVLDDLEK--YPNGLDESRVRKYLFQILRGIEFCHSH-NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYT  158 (286)
T ss_pred             CCccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccC
Confidence            99988887764  334589999999999999999999999 9999999999999999999999999998754332    2


Q ss_pred             cccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ...++..|+|||++.+. .++.++||||||++++||++|++||....
T Consensus       159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~  205 (286)
T cd07846         159 DYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDS  205 (286)
T ss_pred             cccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCc
Confidence            23467889999998754 47889999999999999999998886543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=3.3e-35  Score=243.08  Aligned_cols=190  Identities=19%  Similarity=0.268  Sum_probs=164.5

Q ss_pred             CCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC---hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCCH
Q 024659           65 HGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL  140 (264)
Q Consensus        65 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL  140 (264)
                      ||+|+||+||++.. .+++.+++|.+.....   .....+.+|++++++++|+||+++++++...+..++|+||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            58999999999984 5688999999875321   2234567899999999999999999999988999999999999999


Q ss_pred             HHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---Cccccccc
Q 024659          141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYSTNLA  217 (264)
Q Consensus       141 ~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~  217 (264)
                      .+++.......+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||.+......   ....++..
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  159 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR-RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPG  159 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCC
Confidence            9998754445789999999999999999999999 9999999999999999999999999988754322   22345678


Q ss_pred             ccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       218 y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      |+|||++.+..++.++|+||||+++++|++|+.||...
T Consensus       160 y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  197 (277)
T cd05577         160 YMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQR  197 (277)
T ss_pred             cCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCC
Confidence            99999998888999999999999999999999998654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=3.8e-35  Score=244.98  Aligned_cols=196  Identities=21%  Similarity=0.329  Sum_probs=164.5

Q ss_pred             cccccccCCCCCCCeEEEEEeC-----------------CCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccc
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-----------------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLL  119 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~  119 (264)
                      .|++.+.||+|+||.||++...                 +...+|+|.+...... ....+.+|+++++.++|+||++++
T Consensus         6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~   85 (296)
T cd05095           6 RLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLL   85 (296)
T ss_pred             hceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEE
Confidence            4678888999999999998532                 2446899999765322 345788999999999999999999


Q ss_pred             eeeEeCCcceEEEecCCCCCHHHhhhcCC---------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeC
Q 024659          120 GCCCEGDERLLVAEYMPNDTLAKHLFHWE---------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD  190 (264)
Q Consensus       120 ~~~~~~~~~~lv~e~~~~~sL~~~l~~~~---------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~  190 (264)
                      +++...+..++++||+++++|.+++....         ...+++.++..++.|++.||.|||+. +++|+||||+||+++
T Consensus        86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dlkp~Nili~  164 (296)
T cd05095          86 AVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL-NFVHRDLATRNCLVG  164 (296)
T ss_pred             EEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC-CeecccCChheEEEc
Confidence            99999999999999999999999886422         12467788999999999999999999 999999999999999


Q ss_pred             CCCCeEEcccCCCcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh--CCCCCCC
Q 024659          191 DDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS--GKHIPPS  254 (264)
Q Consensus       191 ~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~--g~~~~~~  254 (264)
                      .++.++|+|||++.......      ....+..|++||....+.++.++|+||||+++|||++  |..||..
T Consensus       165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~  236 (296)
T cd05095         165 KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQ  236 (296)
T ss_pred             CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccc
Confidence            99999999999987543322      1223567999999888889999999999999999998  6667654

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=2.3e-35  Score=244.72  Aligned_cols=195  Identities=18%  Similarity=0.279  Sum_probs=167.0

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      |+.++.||.|++|.||++.. .++..+++|.+.....  .....+.+|++++++++|+||+++++++.+.+..++++||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (284)
T cd07860           2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL   81 (284)
T ss_pred             ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeecc
Confidence            56778889999999999985 4688999999875432  22346889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----Cc
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS  211 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~~  211 (264)
                      . ++|..++.......+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......    ..
T Consensus        82 ~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~-~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~  159 (284)
T cd07860          82 H-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH  159 (284)
T ss_pred             c-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEEeeccchhhcccCcccccc
Confidence            6 5798888654556789999999999999999999999 9999999999999999999999999998754332    12


Q ss_pred             ccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..++..|+|||++.+.. ++.++|+||||+++|+|++|+.||...
T Consensus       160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~  204 (284)
T cd07860         160 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD  204 (284)
T ss_pred             ccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence            34567899999887655 688999999999999999999998654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.2e-35  Score=240.76  Aligned_cols=195  Identities=18%  Similarity=0.219  Sum_probs=165.9

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCC-----CChhHHHHHHHHHHHhcCCCCCccccceeeEeC--Ccce
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS-----AWPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL  129 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~  129 (264)
                      .|.+.+.||+|+||.||++.+ .+++.+++|.+...     .......+.+|++++++++|+||+++++.+.+.  ...+
T Consensus         3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (264)
T cd06653           3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLS   82 (264)
T ss_pred             ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEE
Confidence            356677789999999999995 56889999987532     122345688999999999999999999998764  4578


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~  209 (264)
                      +++||+++++|.+++..  ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus        83 ~v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~-~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~  159 (264)
T cd06653          83 IFVEYMPGGSIKDQLKA--YGALTENVTRRYTRQILQGVSYLHSN-MIVHRDIKGANILRDSAGNVKLGDFGASKRIQTI  159 (264)
T ss_pred             EEEEeCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCEEECccccccccccc
Confidence            99999999999998863  34578889999999999999999999 9999999999999999999999999998754321


Q ss_pred             -------CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 -------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 -------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                             ....++..|+|||++.+..++.++|+||||+++++|++|+.||...
T Consensus       160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  212 (264)
T cd06653         160 CMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEY  212 (264)
T ss_pred             cccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCcc
Confidence                   1235678899999999888999999999999999999999998643

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-35  Score=236.72  Aligned_cols=191  Identities=20%  Similarity=0.208  Sum_probs=166.9

Q ss_pred             cCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC-CCCccccceeeEeCCcceEEEecCCCCCHH
Q 024659           64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMPNDTLA  141 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~  141 (264)
                      .||+|+|+.|-.+. ..++..+|||++.+.......++.+|++++.+.+ |+||+.++++|.++..+|+|||-+.||+|.
T Consensus        85 ~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplL  164 (463)
T KOG0607|consen   85 LLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLL  164 (463)
T ss_pred             HhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHH
Confidence            36999999999988 7889999999999987777788999999999996 999999999999999999999999999999


Q ss_pred             HhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC---CCeEEcccCCCcccCCC---------
Q 024659          142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMKNSRDG---------  209 (264)
Q Consensus       142 ~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~---~~~kl~dfg~~~~~~~~---------  209 (264)
                      ..+.  +...+++..+..+.++|+.||.+||.+ ||.||||||+|||-..-   .-+||+||.+..-.+..         
T Consensus       165 shI~--~~~~F~E~EAs~vvkdia~aLdFlH~k-gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP  241 (463)
T KOG0607|consen  165 SHIQ--KRKHFNEREASRVVKDIASALDFLHTK-GIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTP  241 (463)
T ss_pred             HHHH--HhhhccHHHHHHHHHHHHHHHHHHhhc-CcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCc
Confidence            9886  456799999999999999999999999 99999999999999643   34899999987533211         


Q ss_pred             --Cccccccccccccccc---CC--CCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          210 --RSYSTNLAFTPPEYLR---TG--RVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~~---~~--~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                        ....|+..|||||+..   +.  .|+.++|.||||++||-|++|.+||.++..
T Consensus       242 ~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg  296 (463)
T KOG0607|consen  242 ELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCG  296 (463)
T ss_pred             cccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccC
Confidence              2346778899999863   32  389999999999999999999999987754

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=3.8e-35  Score=239.72  Aligned_cols=194  Identities=20%  Similarity=0.232  Sum_probs=168.0

Q ss_pred             ccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCC-----ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA-----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      |...+.||+|++|.||+|... ++..+++|.+....     ....+.+.+|+++++.++|+||+++++++......++++
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL   81 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence            344566799999999999965 78899999986543     123456889999999999999999999999888999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---  209 (264)
                      ||+++++|.+++..  ...+++..+..++.|++.|+.+||+. +++|+||+|+||+++.++.+||+|||++......   
T Consensus        82 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~  158 (258)
T cd06632          82 ELVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHDR-NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFA  158 (258)
T ss_pred             EecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEccCccceeccccccc
Confidence            99999999999863  34688999999999999999999999 9999999999999999999999999998754432   


Q ss_pred             CcccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ....++..|++||.+.... ++.++|+||||+++++|++|+.||...
T Consensus       159 ~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~  205 (258)
T cd06632         159 KSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQL  205 (258)
T ss_pred             cccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccC
Confidence            2345678899999998776 899999999999999999999998654

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=9.7e-38  Score=240.69  Aligned_cols=197  Identities=21%  Similarity=0.267  Sum_probs=171.1

Q ss_pred             ccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCC--CChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      |.+-+.||+|+|+.|++.. ...|+.+|+|.++..  ...+.+++.+|+++-+.|+||||+++.+.+......++|+|++
T Consensus        13 y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m   92 (355)
T KOG0033|consen   13 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV   92 (355)
T ss_pred             hhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecc
Confidence            5555677999999999988 567889999988754  3335778999999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC---CCCeEEcccCCCcccCCCC--
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRDGR--  210 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~---~~~~kl~dfg~~~~~~~~~--  210 (264)
                      .|+.|..-+-.  ...+++..+...++||+.+|.|+|.+ +|+|||+||+|+++..   ..-+||+|||++.....+.  
T Consensus        93 ~G~dl~~eIV~--R~~ySEa~aSH~~rQiLeal~yCH~n-~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~  169 (355)
T KOG0033|consen   93 TGGELFEDIVA--REFYSEADASHCIQQILEALAYCHSN-GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAW  169 (355)
T ss_pred             cchHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhc-CceeccCChhheeeeeccCCCceeecccceEEEeCCcccc
Confidence            99999866642  24567888999999999999999999 9999999999999963   3459999999998776443  


Q ss_pred             -cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCccc
Q 024659          211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS  258 (264)
Q Consensus       211 -~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~~  258 (264)
                       ...||+.|+|||++...+|+..+|||+-|++||-++.|.+||+++..+
T Consensus       170 ~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~  218 (355)
T KOG0033|consen  170 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH  218 (355)
T ss_pred             ccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH
Confidence             357899999999999999999999999999999999999999985543

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=4.4e-35  Score=241.36  Aligned_cols=196  Identities=22%  Similarity=0.281  Sum_probs=165.0

Q ss_pred             cccccccCCCCCCCeEEEEEeCC----CCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           58 MENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      .+.+.+.||.|+||.||+|.+.+    ...|++|...... ....+.+.+|+.++++++|+||+++++++.. ...++++
T Consensus         7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~   85 (270)
T cd05056           7 DITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVM   85 (270)
T ss_pred             hceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEE
Confidence            35667788999999999998533    3568999887654 3345678899999999999999999998864 5678999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc-
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-  211 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~-  211 (264)
                      ||+++++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++........ 
T Consensus        86 e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~-~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~  163 (270)
T cd05056          86 ELAPLGELRSYLQV-NKYSLDLASLILYSYQLSTALAYLESK-RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYY  163 (270)
T ss_pred             EcCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccChheEEEecCCCeEEccCceeeecccccce
Confidence            99999999999964 334689999999999999999999999 999999999999999999999999999875443321 


Q ss_pred             ----ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          212 ----YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       212 ----~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                          ...+..|+|||.+....++.++||||||++++|+++ |..||....
T Consensus       164 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~  213 (270)
T cd05056         164 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVK  213 (270)
T ss_pred             ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCC
Confidence                123457999999988889999999999999999986 999886543

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=4.7e-35  Score=240.01  Aligned_cols=195  Identities=18%  Similarity=0.259  Sum_probs=173.0

Q ss_pred             cccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      .+++++.||.|++|.||++... +++.+++|.+..... .....+.+|++.+.+++|+|++++++.+...+..++++||+
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM   81 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence            3567788899999999999965 589999999987654 34567899999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC----
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----  210 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~-~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~----  210 (264)
                      ++++|.+++..  ...+++..+..++.|++.|+.+||+ . +++|+||+|+||+++.++.++|+|||.+.......    
T Consensus        82 ~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~-~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~  158 (264)
T cd06623          82 DGGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLHTKR-HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCN  158 (264)
T ss_pred             CCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhccC-CCccCCCCHHHEEECCCCCEEEccCccceecccCCCccc
Confidence            99999999963  3678999999999999999999999 9 99999999999999999999999999987654332    


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ...++..|+|||.+.+..++.++|+||||+++|+|++|+.||...
T Consensus       159 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~  203 (264)
T cd06623         159 TFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPP  203 (264)
T ss_pred             ceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence            235678899999998888999999999999999999999998655

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=3.1e-35  Score=244.31  Aligned_cols=192  Identities=17%  Similarity=0.273  Sum_probs=167.9

Q ss_pred             cccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCC
Q 024659           60 NIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND  138 (264)
Q Consensus        60 ~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  138 (264)
                      ...+.||.|++|.||++.. .+++.+++|.+........+.+.+|+.+++.++|+|++++++++...+..++++||++++
T Consensus        22 ~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~  101 (285)
T cd06648          22 DNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGG  101 (285)
T ss_pred             hcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCC
Confidence            3345679999999999994 568899999987655445566889999999999999999999999999999999999999


Q ss_pred             CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----Ccccc
Q 024659          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYST  214 (264)
Q Consensus       139 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~  214 (264)
                      +|.+++..   ..+++..+..++.|++.|+.+||++ +++|+||+|+||+++.++.++|+|||.+......    ....+
T Consensus       102 ~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~  177 (285)
T cd06648         102 ALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQ-GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVG  177 (285)
T ss_pred             CHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccC
Confidence            99999853   4688899999999999999999999 9999999999999999999999999987654322    22357


Q ss_pred             cccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       215 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      +..|+|||.+.+..++.++|+||||+++++|++|+.||...
T Consensus       178 ~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~  218 (285)
T cd06648         178 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNE  218 (285)
T ss_pred             CccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCC
Confidence            78899999998888999999999999999999999998653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=3.7e-35  Score=250.03  Aligned_cols=197  Identities=20%  Similarity=0.318  Sum_probs=163.5

Q ss_pred             ccccccccCCCCCCCeEEEEEe------CCCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcC-CCCCccccceeeEeC-Cc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEG-DE  127 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~-~~  127 (264)
                      ++|++.+.||.|+||.||+|.+      .+++.||+|.++.... .....+.+|+.++.++ +|+||+++++++... ..
T Consensus         7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~   86 (343)
T cd05103           7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP   86 (343)
T ss_pred             hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence            3578888999999999999973      3467899999976432 2345688999999999 689999999988654 45


Q ss_pred             ceEEEecCCCCCHHHhhhcCC-----------------------------------------------------------
Q 024659          128 RLLVAEYMPNDTLAKHLFHWE-----------------------------------------------------------  148 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~~-----------------------------------------------------------  148 (264)
                      .++++||+++++|.+++....                                                           
T Consensus        87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (343)
T cd05103          87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA  166 (343)
T ss_pred             eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence            789999999999999885321                                                           


Q ss_pred             ------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC------cccccc
Q 024659          149 ------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR------SYSTNL  216 (264)
Q Consensus       149 ------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~------~~~~~~  216 (264)
                            ...+++..+..++.|++.||.|||++ +++||||||+||+++.++.++|+|||++.......      ...++.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~  245 (343)
T cd05103         167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPL  245 (343)
T ss_pred             hhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCc
Confidence                  12367788899999999999999999 99999999999999999999999999987643221      123356


Q ss_pred             cccccccccCCCCCCccceechHHHHHHHHh-CCCCCCC
Q 024659          217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPS  254 (264)
Q Consensus       217 ~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~  254 (264)
                      .|+|||.+.+..++.++||||||+++|+|++ |..|+..
T Consensus       246 ~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~  284 (343)
T cd05103         246 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG  284 (343)
T ss_pred             ceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence            7999999988889999999999999999997 8888754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=2.9e-35  Score=244.43  Aligned_cols=195  Identities=21%  Similarity=0.293  Sum_probs=168.1

Q ss_pred             cccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      .|++++.||+|+||.||++... +++.|++|.++...  ....+.+.+|++++++++|+||+++++++...+..++++||
T Consensus         2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   81 (288)
T cd07833           2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY   81 (288)
T ss_pred             ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence            4678888999999999999954 57899999987542  22346788999999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC----
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----  210 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~----  210 (264)
                      ++++.+..+..  ....+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++.......    
T Consensus        82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~  158 (288)
T cd07833          82 VERTLLELLEA--SPGGLPPDAVRSYIWQLLQAIAYCHSH-NIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPL  158 (288)
T ss_pred             CCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccc
Confidence            98876665554  345689999999999999999999999 99999999999999999999999999987654432    


Q ss_pred             -cccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          211 -SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       211 -~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                       ...++..|+|||++.+. .++.++|+||||+++|+|++|++||...
T Consensus       159 ~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~  205 (288)
T cd07833         159 TDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGD  205 (288)
T ss_pred             cCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence             34557889999999888 7899999999999999999999988643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=8e-35  Score=245.39  Aligned_cols=194  Identities=17%  Similarity=0.229  Sum_probs=167.6

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC---hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      +..++.||+|+||.||++.. .++..+|+|.+.....   .....+.+|++++++++|+|++++++++...+..++|+||
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  106 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY  106 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence            45667789999999999995 5688999999875422   2345688899999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCcccc
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST  214 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~  214 (264)
                      +.+ +|.+.+.. ....+++.++..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++..........+
T Consensus       107 ~~g-~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~-~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~  183 (317)
T cd06635         107 CLG-SASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSH-NMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVG  183 (317)
T ss_pred             CCC-CHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcccEEECCCCCEEEecCCCccccCCcccccC
Confidence            975 77777643 345689999999999999999999999 999999999999999999999999999887666666678


Q ss_pred             ccccccccccc---CCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          215 NLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       215 ~~~y~aPE~~~---~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      +..|+|||++.   .+.++.++|+||||++++||++|+.||...
T Consensus       184 ~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~  227 (317)
T cd06635         184 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM  227 (317)
T ss_pred             CccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCc
Confidence            88999999974   345889999999999999999999998654

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=6.4e-35  Score=239.21  Aligned_cols=187  Identities=27%  Similarity=0.420  Sum_probs=155.1

Q ss_pred             cCCCCCCCeEEEEEeC----CCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEe-CCcceEEEecCCC
Q 024659           64 EHGEKAPNVVYKGKLE----NQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLLVAEYMPN  137 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~  137 (264)
                      .||+|+||.||+|.+.    ....+|+|.+.... ....+.+.+|+.+++.++||||+++++++.. ++..++++||+.+
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~   81 (262)
T cd05058           2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH   81 (262)
T ss_pred             cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence            4699999999999853    24578999986433 3345678899999999999999999998764 4567899999999


Q ss_pred             CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--------
Q 024659          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--------  209 (264)
Q Consensus       138 ~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--------  209 (264)
                      ++|.+++.. .....++..+..++.|++.||.|||+. +++|+||+|+||++++++.+||+|||++......        
T Consensus        82 ~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~  159 (262)
T cd05058          82 GDLRNFIRS-ETHNPTVKDLIGFGLQVAKGMEYLASK-KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNH  159 (262)
T ss_pred             CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccCcceEEEcCCCcEEECCccccccccCCcceeeccc
Confidence            999999864 233467778889999999999999999 9999999999999999999999999998754321        


Q ss_pred             CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCC
Q 024659          210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP  252 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~  252 (264)
                      ....++..|+|||.+.+..++.++||||||+++|||++|+.|+
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~  202 (262)
T cd05058         160 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP  202 (262)
T ss_pred             ccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCC
Confidence            1223456799999998888999999999999999999965443

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=6.1e-35  Score=241.75  Aligned_cols=198  Identities=19%  Similarity=0.251  Sum_probs=167.1

Q ss_pred             ccccccccCCCCCCCeEEEEEeCC-----CCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEe-CCcce
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLEN-----QFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERL  129 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~  129 (264)
                      +.|.+.+.||+|+||.||+|.+.+     +..|++|.+.... ......+.+|+.++++++|+||+++++++.. ....+
T Consensus         6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~   85 (280)
T cd05043           6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPF   85 (280)
T ss_pred             hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCE
Confidence            345667778999999999999655     6789999887543 2335568899999999999999999998776 46788


Q ss_pred             EEEecCCCCCHHHhhhcCCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCC
Q 024659          130 LVAEYMPNDTLAKHLFHWET------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~------~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~  203 (264)
                      ++++|+++++|.+++.....      ..+++.++..++.|++.||.|||+. +++|+||+|+||++++++.+||+|||++
T Consensus        86 ~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~i~H~di~p~nil~~~~~~~kl~d~g~~  164 (280)
T cd05043          86 VLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR-GVIHKDIAARNCVIDEELQVKITDNALS  164 (280)
T ss_pred             EEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccCHhhEEEcCCCcEEECCCCCc
Confidence            99999999999999864321      4688999999999999999999999 9999999999999999999999999998


Q ss_pred             cccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          204 KNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       204 ~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      +......      ...++..|+|||++.+..++.++||||||+++||+++ |+.||...
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~  223 (280)
T cd05043         165 RDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEI  223 (280)
T ss_pred             ccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcC
Confidence            7543321      2334667999999988889999999999999999999 88888643

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=3.8e-35  Score=243.20  Aligned_cols=197  Identities=15%  Similarity=0.237  Sum_probs=165.9

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcC-CCCCccccceeeEe------CCcc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCE------GDER  128 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~------~~~~  128 (264)
                      ..|++++.+|.|+||.||++.. .+++.+|+|.+.... .....+..|+.+++++ +|+||+++++++..      .+..
T Consensus        16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   94 (282)
T cd06636          16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQL   94 (282)
T ss_pred             hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEE
Confidence            3456677789999999999995 568899999987643 2345678899999998 69999999999853      3567


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      +++|||+++++|.+++.......+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus        95 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~  173 (282)
T cd06636          95 WLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH-KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR  173 (282)
T ss_pred             EEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEeeCcchhhhhc
Confidence            9999999999999998754556688888999999999999999999 999999999999999999999999999875432


Q ss_pred             ----CCccccccccccccccc-----CCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          209 ----GRSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       209 ----~~~~~~~~~y~aPE~~~-----~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                          .....++..|+|||.+.     ...++.++|+||||+++|||++|..||...
T Consensus       174 ~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~  229 (282)
T cd06636         174 TVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDM  229 (282)
T ss_pred             cccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCcccc
Confidence                22345778899999885     345888999999999999999999998643

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=6e-36  Score=253.36  Aligned_cols=195  Identities=16%  Similarity=0.164  Sum_probs=164.9

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCC--CChhHHHHHHHHHHHhcCC-CCCccccceeeEeCCcceEEEe
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      ..|+++++||.|+.+.||++...+...+|+|++...  .......|.+|+..|.+|+ |.+|++++++-..+..+|||||
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE  440 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME  440 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence            568999999999999999999877777887776543  3344677999999999996 8999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----  209 (264)
                      |-+ .+|..+|+........| .++.+..|++.++.++|+. ||||.||||.|+|+- .|.+||+|||+|..+...    
T Consensus       441 ~Gd-~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~-gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI  516 (677)
T KOG0596|consen  441 CGD-IDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQH-GIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSI  516 (677)
T ss_pred             ccc-ccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHh-ceeecCCCcccEEEE-eeeEEeeeechhcccCccccce
Confidence            864 47999997533333334 7889999999999999999 999999999999986 679999999999876654    


Q ss_pred             --CcccccccccccccccCC-----------CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 --RSYSTNLAFTPPEYLRTG-----------RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~~~~-----------~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                        ....||+.||+||.+...           +.++++|||||||+||+|+.|++||..-
T Consensus       517 ~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~  575 (677)
T KOG0596|consen  517 VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI  575 (677)
T ss_pred             eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH
Confidence              345899999999998532           2678999999999999999999999653

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=3.6e-35  Score=243.24  Aligned_cols=198  Identities=23%  Similarity=0.344  Sum_probs=169.6

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-----CCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEe--CCcc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCE--GDER  128 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~  128 (264)
                      ..+++++.||+|+||.||++.+.     .++.+|+|.+...... ....+.+|++.++.++|+||+++++++..  ....
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            34677888999999999999853     3689999999876543 45678999999999999999999999877  5578


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      ++++||+++++|.+++.. ....+++..+..++.|++.||.|||++ +++|+||+|+||+++.++.++|+|||++.....
T Consensus        84 ~lv~e~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  161 (284)
T cd05038          84 RLIMEYLPSGSLRDYLQR-HRDQINLKRLLLFSSQICKGMDYLGSQ-RYIHRDLAARNILVESEDLVKISDFGLAKVLPE  161 (284)
T ss_pred             EEEEecCCCCCHHHHHHh-CccccCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence            999999999999999964 333589999999999999999999999 999999999999999999999999999886553


Q ss_pred             CCc-------ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 GRS-------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 ~~~-------~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ...       ...+..|+|||.+.+..++.++|+||||++++||++|..|+....
T Consensus       162 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~  216 (284)
T cd05038         162 DKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPP  216 (284)
T ss_pred             CCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCccccc
Confidence            211       223456999999988889999999999999999999999886543

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=4.8e-35  Score=244.04  Aligned_cols=189  Identities=17%  Similarity=0.274  Sum_probs=166.3

Q ss_pred             ccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCCHH
Q 024659           63 SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA  141 (264)
Q Consensus        63 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~  141 (264)
                      ..||+|+||.||++.. .+++.||+|.+..........+.+|+.+++.++|+|++++++.+...+..++++||+++++|.
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  105 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT  105 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence            4579999999999985 578899999987655445567889999999999999999999999999999999999999999


Q ss_pred             HhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----Cccccccc
Q 024659          142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTNLA  217 (264)
Q Consensus       142 ~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~  217 (264)
                      +++.   ...+++..+..++.|++.++.|||+. +++|+||+|+||+++.++.++|+|||++......    ....++..
T Consensus       106 ~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~-givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  181 (292)
T cd06657         106 DIVT---HTRMNEEQIAAVCLAVLKALSVLHAQ-GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPY  181 (292)
T ss_pred             HHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCcc
Confidence            9874   34588999999999999999999999 9999999999999999999999999987654322    22456788


Q ss_pred             ccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       218 y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      |+|||.+.+..++.++|+||||+++++|++|..||...
T Consensus       182 y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~  219 (292)
T cd06657         182 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE  219 (292)
T ss_pred             ccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            99999998888999999999999999999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=4.2e-35  Score=242.06  Aligned_cols=197  Identities=19%  Similarity=0.294  Sum_probs=167.5

Q ss_pred             ccccccccCCCCCCCeEEEEEeC------CCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcce
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  129 (264)
                      +.+.+++.||.|+||.||+++..      +.+.+++|.+...... ....+.+|++++++++|+||+++++++...+..+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            45678888999999999999853      2467999998765543 3567899999999999999999999998888899


Q ss_pred             EEEecCCCCCHHHhhhcCCC-------CCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCC
Q 024659          130 LVAEYMPNDTLAKHLFHWET-------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL  202 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~-------~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~  202 (264)
                      +++||+++++|.+++.....       ..+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++++|||+
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~-~i~H~dlkp~Nili~~~~~~~l~~~~~  163 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA-RFVHRDLAARNCLVSSQREVKVSLLSL  163 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc-CcccCcCccceEEEeCCCcEEEccccc
Confidence            99999999999999864331       1689999999999999999999999 999999999999999999999999999


Q ss_pred             CcccCCC-----CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCC
Q 024659          203 MKNSRDG-----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPS  254 (264)
Q Consensus       203 ~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~  254 (264)
                      +......     ....++..|+|||.+.+..++.++||||||+++++|++ |..||..
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~  221 (275)
T cd05046         164 SKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYG  221 (275)
T ss_pred             ccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence            7643221     22244567999999988888999999999999999999 6677753

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=8.8e-35  Score=239.67  Aligned_cols=190  Identities=24%  Similarity=0.337  Sum_probs=159.1

Q ss_pred             cCCCCCCCeEEEEEeCC-CC--EEEEEEeCCCC-ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEEEecCCCC
Q 024659           64 EHGEKAPNVVYKGKLEN-QF--RIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND  138 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~  138 (264)
                      .||+|+||.||++.+.+ +.  .+++|.+.... ....+.+.+|++++.++ +||||+++++++...+..+++|||++++
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~   81 (270)
T cd05047           2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG   81 (270)
T ss_pred             cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence            46999999999999643 43  56888887533 23456788999999999 7999999999999988999999999999


Q ss_pred             CHHHhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCc
Q 024659          139 TLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (264)
Q Consensus       139 sL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~  204 (264)
                      +|.+++....              ...+++.++..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++.
T Consensus        82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~-~i~H~dikp~nili~~~~~~kl~dfgl~~  160 (270)
T cd05047          82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVAKIADFGLSR  160 (270)
T ss_pred             cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccccceEEEcCCCeEEECCCCCcc
Confidence            9999986421              12478899999999999999999999 99999999999999999999999999985


Q ss_pred             ccCCC---CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCC
Q 024659          205 NSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPS  254 (264)
Q Consensus       205 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~  254 (264)
                      .....   .....+..|+|||++....++.++|+||||++++||++ |..||..
T Consensus       161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~  214 (270)
T cd05047         161 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG  214 (270)
T ss_pred             ccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccc
Confidence            32211   11223467999999988889999999999999999997 8888854

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=7.7e-35  Score=237.82  Aligned_cols=194  Identities=30%  Similarity=0.483  Sum_probs=167.2

Q ss_pred             cccccCCCCCCCeEEEEEeCC-----CCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           60 NIVSEHGEKAPNVVYKGKLEN-----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        60 ~~l~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      ++++.||.|+||.||++.+.+     +..+|+|.+...... ....+.+|++.++.++|+||+++++++.+.+..++++|
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            356778999999999999654     378999999766533 45678899999999999999999999999899999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc--
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS--  211 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~--  211 (264)
                      |+++++|.+++.......+++.++..++.|++.||.+||+. +++|+||+|+||+++.++.++|+|||++........  
T Consensus        82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~-~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~  160 (258)
T smart00219       82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK-NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYK  160 (258)
T ss_pred             ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC-CeeecccccceEEEccCCeEEEcccCCceecccccccc
Confidence            99999999998643332389999999999999999999999 999999999999999999999999999876543311  


Q ss_pred             ---ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCC
Q 024659          212 ---YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPS  254 (264)
Q Consensus       212 ---~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~  254 (264)
                         ..++..|+|||.+.+..++.++|+||||+++++|++ |.+||..
T Consensus       161 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~  207 (258)
T smart00219      161 KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPG  207 (258)
T ss_pred             cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Confidence               225678999999988889999999999999999998 6777754

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=8.2e-35  Score=238.64  Aligned_cols=189  Identities=17%  Similarity=0.202  Sum_probs=166.4

Q ss_pred             CCCCCCCeEEEEEeC-CCCEEEEEEeCCCCC---hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCCH
Q 024659           65 HGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL  140 (264)
Q Consensus        65 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL  140 (264)
                      ||.|++|.||++... .++.+++|.+.....   ...+.+.+|+.+++.++|+||+++++.+.+++..++++||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            589999999999965 478999999975432   2345688999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---Cccccccc
Q 024659          141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYSTNLA  217 (264)
Q Consensus       141 ~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~  217 (264)
                      .+++..  ...++...+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......   ....++..
T Consensus        81 ~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lH~~-~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~  157 (262)
T cd05572          81 WTILRD--RGLFDEYTARFYIACVVLAFEYLHNR-GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPE  157 (262)
T ss_pred             HHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcC
Confidence            999863  34688999999999999999999999 9999999999999999999999999998865443   23456788


Q ss_pred             ccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       218 y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      |++||.+.+..++.++|+||||+++|+|++|..||....
T Consensus       158 ~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  196 (262)
T cd05572         158 YVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDD  196 (262)
T ss_pred             ccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCC
Confidence            999999988889999999999999999999999997554

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=4.1e-35  Score=244.40  Aligned_cols=197  Identities=17%  Similarity=0.241  Sum_probs=167.2

Q ss_pred             CccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChh--HHHHHHHHHHHhcCCCCCccccceeeEeC--CcceE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLL  130 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~l  130 (264)
                      ...|++++.||.|.||.||+|.+. +++.+++|.++......  ...+.+|+.++++++|+||+++++++...  +..++
T Consensus         4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l   83 (293)
T cd07843           4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM   83 (293)
T ss_pred             hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence            456778888999999999999965 58899999997543222  23467899999999999999999998877  78999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-  209 (264)
                      ++||+.+ +|.+++.. ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++...... 
T Consensus        84 v~e~~~~-~L~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~-~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~  160 (293)
T cd07843          84 VMEYVEH-DLKSLMET-MKQPFLQSEVKCLMLQLLSGVAHLHDN-WILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL  160 (293)
T ss_pred             EehhcCc-CHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence            9999975 89988864 334689999999999999999999999 9999999999999999999999999998765443 


Q ss_pred             ---CcccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 ---RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 ---~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                         ....++..|+|||.+.+.. ++.++|+||||+++++|++|.+||...
T Consensus       161 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~  210 (293)
T cd07843         161 KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGK  210 (293)
T ss_pred             cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence               2234577899999987654 688999999999999999999998643

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=6.1e-35  Score=244.61  Aligned_cols=194  Identities=22%  Similarity=0.341  Sum_probs=162.3

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCC----EEEEEEeCCCCChh-HHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQF----RIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      ++.++.||+|+||.||++.+ .++.    .+|+|.+....... ...+.+|+.+++.++|+||+++++++... ..++++
T Consensus         9 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~   87 (303)
T cd05110           9 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVT   87 (303)
T ss_pred             ceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceeee
Confidence            45677889999999999985 3443    57889887654322 34688999999999999999999998654 567899


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC--
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--  210 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~--  210 (264)
                      +|+++++|.+++.. ....+++..+..++.|++.||.|||++ +++|+||||+||++++++.+||+|||+++......  
T Consensus        88 e~~~~g~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~  165 (303)
T cd05110          88 QLMPHGCLLDYVHE-HKDNIGSQLLLNWCVQIAKGMMYLEER-RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE  165 (303)
T ss_pred             hhcCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHhhc-CeeccccccceeeecCCCceEEccccccccccCcccc
Confidence            99999999999864 344688999999999999999999999 99999999999999999999999999987644321  


Q ss_pred             ----cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       211 ----~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                          ...++..|+|||++.+..++.++||||||+++|||++ |+.||...
T Consensus       166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~  215 (303)
T cd05110         166 YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI  215 (303)
T ss_pred             cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence                1234568999999988889999999999999999997 88888654

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=1.2e-34  Score=238.64  Aligned_cols=189  Identities=20%  Similarity=0.257  Sum_probs=154.5

Q ss_pred             cCCCCCCCeEEEEEeCC---CCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCC
Q 024659           64 EHGEKAPNVVYKGKLEN---QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT  139 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~s  139 (264)
                      +||+|+||.||++...+   ...+++|.+..... ...+.+.+|+..++.++||||+++++.+......+++|||+++++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            57999999999997433   23566777765432 345678999999999999999999999999889999999999999


Q ss_pred             HHHhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC------CCc
Q 024659          140 LAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD------GRS  211 (264)
Q Consensus       140 L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~------~~~  211 (264)
                      |.+++....  ....+...+..++.||+.||.|||+. +++|+||||+||+++.++.++|+|||++.....      ...
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~  160 (268)
T cd05086          82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH-NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDD  160 (268)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC-CeeccCCccceEEEcCCccEEecccccccccCcchhhhcccC
Confidence            999986432  23456777889999999999999999 999999999999999999999999998754221      223


Q ss_pred             ccccccccccccccC-------CCCCCccceechHHHHHHHHhC-CCCCC
Q 024659          212 YSTNLAFTPPEYLRT-------GRVTPESVMYSFGTLLLDLLSG-KHIPP  253 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~-------~~~~~~~DiwslG~~l~el~~g-~~~~~  253 (264)
                      ..++..|+|||++..       ..++.++||||||+++|||+++ ..||.
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~  210 (268)
T cd05086         161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYS  210 (268)
T ss_pred             CcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCC
Confidence            456788999998753       2357899999999999999975 45554

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.2e-35  Score=237.77  Aligned_cols=189  Identities=25%  Similarity=0.388  Sum_probs=160.6

Q ss_pred             ccCCCCCCCeEEEEEeCC----CCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCC
Q 024659           63 SEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN  137 (264)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  137 (264)
                      ++||+|+||.||+|.+..    +..+|+|.+...... ..+.+.+|+++++.++|+||+++++++. .+..++++||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            367999999999997432    268999999866542 3456889999999999999999999875 5568999999999


Q ss_pred             CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCcc-----
Q 024659          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY-----  212 (264)
Q Consensus       138 ~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~~-----  212 (264)
                      ++|.+++..  ...+++..+..++.|++.||.+||+. +++|+||+|+||+++.++.++|+|||++.........     
T Consensus        80 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lh~~-~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~  156 (257)
T cd05060          80 GPLLKYLKK--RREIPVSDLKELAHQVAMGMAYLESK-HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATT  156 (257)
T ss_pred             CcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhc-CeeccCcccceEEEcCCCcEEeccccccceeecCCccccccc
Confidence            999999963  33689999999999999999999999 9999999999999999999999999998755333221     


Q ss_pred             --cccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          213 --STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       213 --~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                        .++..|+|||.+.+..++.++||||||+++|+|++ |..||...
T Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~  202 (257)
T cd05060         157 AGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEM  202 (257)
T ss_pred             CccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccC
Confidence              12357999999988889999999999999999998 88888543

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=5.5e-35  Score=243.03  Aligned_cols=197  Identities=23%  Similarity=0.389  Sum_probs=166.6

Q ss_pred             ccccccccCCCCCCCeEEEEEeC------CCCEEEEEEeCCCCChh-HHHHHHHHHHHhcCCCCCccccceeeEeCCcce
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  129 (264)
                      ++++++++||.|+||.||++...      ++..+|+|.+....... ...+.+|+.++++++|+||+++++++......+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~   84 (288)
T cd05050           5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMC   84 (288)
T ss_pred             HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccE
Confidence            45778889999999999999853      46789999987654332 456888999999999999999999999888999


Q ss_pred             EEEecCCCCCHHHhhhcCC--------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeee
Q 024659          130 LVAEYMPNDTLAKHLFHWE--------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF  189 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~--------------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~  189 (264)
                      +++||+++++|.+++....                    ...+++..++.++.|++.||.|||++ +++|+||+|+||++
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~-~i~H~dl~p~nil~  163 (288)
T cd05050          85 LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER-KFVHRDLATRNCLV  163 (288)
T ss_pred             EEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC-CeecccccHhheEe
Confidence            9999999999999986321                    12467888999999999999999999 99999999999999


Q ss_pred             CCCCCeEEcccCCCcccCCC------CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCC
Q 024659          190 DDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPS  254 (264)
Q Consensus       190 ~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~  254 (264)
                      +.++.++|+|||++......      .....+..|+|||.+.+..++.++||||||+++|||++ |..||..
T Consensus       164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~  235 (288)
T cd05050         164 GENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYG  235 (288)
T ss_pred             cCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence            99999999999998754322      12233567999999988889999999999999999997 7777753

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=7.1e-35  Score=247.45  Aligned_cols=197  Identities=21%  Similarity=0.337  Sum_probs=165.6

Q ss_pred             cccccccCCCCCCCeEEEEEeCC--------CCEEEEEEeCCCC-ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCc
Q 024659           58 MENIVSEHGEKAPNVVYKGKLEN--------QFRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDE  127 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~  127 (264)
                      .|++.+.||+|+||.||++...+        ...+|+|.+.... ......+.+|+++++++ +|+||+++++++...+.
T Consensus        13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~   92 (334)
T cd05100          13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP   92 (334)
T ss_pred             HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCc
Confidence            36788899999999999997421        2368999887543 23456788999999999 79999999999998889


Q ss_pred             ceEEEecCCCCCHHHhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC
Q 024659          128 RLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV  193 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~  193 (264)
                      .++++||+++++|.+++....              ...+++.++..++.|++.||.|||++ +++|+||||+||+++.++
T Consensus        93 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-givH~dlkp~Nill~~~~  171 (334)
T cd05100          93 LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ-KCIHRDLAARNVLVTEDN  171 (334)
T ss_pred             eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC-CeeccccccceEEEcCCC
Confidence            999999999999999986421              23477888999999999999999999 999999999999999999


Q ss_pred             CeEEcccCCCcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          194 NPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       194 ~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      .++|+|||+++......      ...++..|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus       172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~  240 (334)
T cd05100         172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI  240 (334)
T ss_pred             cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCC
Confidence            99999999987554321      1223467999999998889999999999999999998 77777644

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=1.2e-34  Score=235.53  Aligned_cols=195  Identities=19%  Similarity=0.265  Sum_probs=174.3

Q ss_pred             ccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCC
Q 024659           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN  137 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  137 (264)
                      |.+.+.||+|++|.||++... +++.+++|++..........+.+|++.+++++|+|++++++.+......++++||+++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~   81 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG   81 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence            566778899999999999965 6889999999876654567789999999999999999999999998999999999999


Q ss_pred             CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---Ccccc
Q 024659          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYST  214 (264)
Q Consensus       138 ~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---~~~~~  214 (264)
                      ++|.+++.. ....+++..+..++.|++.++.+||+. +++|+||+|+||++++++.++|+|||.+......   ....+
T Consensus        82 ~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~-~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~  159 (253)
T cd05122          82 GSLKDLLKS-TNQTLTESQIAYVCKELLKGLEYLHSN-GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVG  159 (253)
T ss_pred             CcHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHhhcC-CEecCCCCHHHEEEccCCeEEEeeccccccccccccccceec
Confidence            999999864 225789999999999999999999998 9999999999999999999999999998776554   34567


Q ss_pred             cccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       215 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      +..|+|||.+.+..++.++|+||||+++++|++|+.||...
T Consensus       160 ~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  200 (253)
T cd05122         160 TPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSEL  200 (253)
T ss_pred             CCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence            78899999998888999999999999999999999998755

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=7.2e-35  Score=240.26  Aligned_cols=193  Identities=20%  Similarity=0.228  Sum_probs=165.1

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh----------hHHHHHHHHHHHhcCCCCCccccceeeEeCCc
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP----------DARQFLEEARAVGQLRNRRLANLLGCCCEGDE  127 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~----------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~  127 (264)
                      |.+.+.||.|+||.||+|.. .+++.+|+|.+......          ..+.+.+|+.++++++|+|++++++++...+.
T Consensus         3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   82 (272)
T cd06629           3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY   82 (272)
T ss_pred             eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence            45566789999999999984 56889999988642111          12457789999999999999999999999899


Q ss_pred             ceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      .++|+||+++++|.+++..  ...+++..+..++.|++.||.+||++ +++|+||+|+||+++.++.++|+|||++....
T Consensus        83 ~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~  159 (272)
T cd06629          83 LSIFLEYVPGGSIGSCLRT--YGRFEEQLVRFFTEQVLEGLAYLHSK-GILHRDLKADNLLVDADGICKISDFGISKKSD  159 (272)
T ss_pred             eEEEEecCCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhC-CeeecCCChhhEEEcCCCeEEEeecccccccc
Confidence            9999999999999999864  35688999999999999999999999 99999999999999999999999999987543


Q ss_pred             CC------CcccccccccccccccCCC--CCCccceechHHHHHHHHhCCCCCCC
Q 024659          208 DG------RSYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       208 ~~------~~~~~~~~y~aPE~~~~~~--~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      ..      ....++..|+|||.+....  ++.++|+||||++++++++|..||..
T Consensus       160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~  214 (272)
T cd06629         160 DIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSD  214 (272)
T ss_pred             ccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcC
Confidence            22      1235678899999987654  88999999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.7e-36  Score=236.14  Aligned_cols=200  Identities=20%  Similarity=0.216  Sum_probs=169.7

Q ss_pred             hCCCccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCC----Chh----HHHHHHHHHHHhcCC-CCCccccceee
Q 024659           53 TSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA----WPD----ARQFLEEARAVGQLR-NRRLANLLGCC  122 (264)
Q Consensus        53 ~~~~~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~----~~~----~~~~~~e~~~l~~l~-h~~i~~~~~~~  122 (264)
                      ...|..|+--+.+|.|..++|-+.. ..++..+|+|++....    .+.    .+.-.+|+.+|+++. ||+|+++.+++
T Consensus        13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y   92 (411)
T KOG0599|consen   13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY   92 (411)
T ss_pred             hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence            3444555555566999988888887 5668889999886421    111    234578999999995 99999999999


Q ss_pred             EeCCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCC
Q 024659          123 CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL  202 (264)
Q Consensus       123 ~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~  202 (264)
                      +.+...++|+|.++.|.|.|++.  ..-.+++...+.|++|++.|+.|||.+ +|+||||||+|||++++.+++|+|||.
T Consensus        93 es~sF~FlVFdl~prGELFDyLt--s~VtlSEK~tR~iMrqlfegVeylHa~-~IVHRDLKpENILlddn~~i~isDFGF  169 (411)
T KOG0599|consen   93 ESDAFVFLVFDLMPRGELFDYLT--SKVTLSEKETRRIMRQLFEGVEYLHAR-NIVHRDLKPENILLDDNMNIKISDFGF  169 (411)
T ss_pred             cCcchhhhhhhhcccchHHHHhh--hheeecHHHHHHHHHHHHHHHHHHHHh-hhhhcccChhheeeccccceEEeccce
Confidence            99999999999999999999996  445688999999999999999999999 999999999999999999999999999


Q ss_pred             CcccCCCC---ccccccccccccccc------CCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          203 MKNSRDGR---SYSTNLAFTPPEYLR------TGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       203 ~~~~~~~~---~~~~~~~y~aPE~~~------~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ++....+.   ..+||++|.|||.+.      ...|+...|+||.|+++|.++.|-+||...
T Consensus       170 a~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR  231 (411)
T KOG0599|consen  170 ACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR  231 (411)
T ss_pred             eeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH
Confidence            99877764   458999999999884      224888899999999999999999999743

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=8.1e-35  Score=241.22  Aligned_cols=196  Identities=19%  Similarity=0.237  Sum_probs=162.3

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC-hhHHHHHHHHHH-HhcCCCCCccccceeeEeCCcceEEEec
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARA-VGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~-l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      +|++++.||+|+||.||++.+ .+++.||+|++..... .....+..|+.. ++.++|+||+++++++...+..++++||
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~   81 (283)
T cd06617           2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV   81 (283)
T ss_pred             CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence            467788899999999999995 4689999999976532 233445556654 6667899999999999998999999999


Q ss_pred             CCCCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC--
Q 024659          135 MPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--  210 (264)
Q Consensus       135 ~~~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~--  210 (264)
                      ++ ++|.+++...  ....+++..++.++.|++.||.|||++.+++|+||||+||+++.++.+||+|||++.......  
T Consensus        82 ~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~  160 (283)
T cd06617          82 MD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAK  160 (283)
T ss_pred             hc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence            96 5788877542  235689999999999999999999985489999999999999999999999999987654322  


Q ss_pred             -cccccccccccccccC----CCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          211 -SYSTNLAFTPPEYLRT----GRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       211 -~~~~~~~y~aPE~~~~----~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                       ...++..|+|||.+.+    ..++.++|+||||+++|+|++|+.||..
T Consensus       161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  209 (283)
T cd06617         161 TIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDS  209 (283)
T ss_pred             ccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCc
Confidence             2356788999998865    3468899999999999999999999864

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=7e-35  Score=243.10  Aligned_cols=197  Identities=20%  Similarity=0.262  Sum_probs=165.4

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      +.|+++++||.|.+|.||++.+ .+++.+|+|.+.....  .....+.+|++++++++|+||+++++++...+..++|+|
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            4578888999999999999995 4688999999875432  223567889999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC-CCCeEEcccCCCcccCCC---
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSRDG---  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~-~~~~kl~dfg~~~~~~~~---  209 (264)
                      |+++ +|.+.+.......+++..+..++.||+.||.|||++ +++|+||+|+||+++. ++.+||+|||++......   
T Consensus        82 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~  159 (294)
T PLN00009         82 YLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH-RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT  159 (294)
T ss_pred             cccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCcceEEEECCCCEEEEcccccccccCCCccc
Confidence            9964 788877543444567888899999999999999999 9999999999999985 567999999998754322   


Q ss_pred             -CcccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 -RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 -~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                       ....++..|+|||++.+. .++.++||||||+++|+|++|.+||...
T Consensus       160 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~  207 (294)
T PLN00009        160 FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGD  207 (294)
T ss_pred             cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence             223457889999998764 4789999999999999999999998644

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.8e-35  Score=253.56  Aligned_cols=203  Identities=20%  Similarity=0.302  Sum_probs=178.6

Q ss_pred             hCCCccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCCh--hHHHHHHHHHHHhcCCCCCccccceeeEeCCcce
Q 024659           53 TSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        53 ~~~~~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  129 (264)
                      .+.+.-|.++++||.|.|++|.+++ ...+..||+|.+++..-.  ..+.+.+|+++++.+.||||++++.+......++
T Consensus        52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ly  131 (596)
T KOG0586|consen   52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLY  131 (596)
T ss_pred             cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeE
Confidence            4455668899999999999999999 456889999999876432  2355889999999999999999999999999999


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~  209 (264)
                      +||||+.++.+++++.+  ...+.+..+..+..|+..|++|+|++ +|+|||||++|++++.+.++||+|||++......
T Consensus       132 lV~eya~~ge~~~yl~~--~gr~~e~~ar~~F~q~vsaveYcH~k-~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~  208 (596)
T KOG0586|consen  132 LVMEYASGGELFDYLVK--HGRMKEKEARAKFRQIVSAVEYCHSK-NIVHRDLKAENILLDENMNIKIADFGFSTFFDYG  208 (596)
T ss_pred             EEEEeccCchhHHHHHh--cccchhhhhhhhhHHHHHHHHHHhhc-ceeccccchhhcccccccceeeeccccceeeccc
Confidence            99999999999999974  33455588889999999999999999 9999999999999999999999999999876543


Q ss_pred             ---CcccccccccccccccCCCC-CCccceechHHHHHHHHhCCCCCCCCccc
Q 024659          210 ---RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHVSS  258 (264)
Q Consensus       210 ---~~~~~~~~y~aPE~~~~~~~-~~~~DiwslG~~l~el~~g~~~~~~~~~~  258 (264)
                         +...|++.|+|||++.+..+ .+.+|+||+|++||.|+.|..||....-.
T Consensus       209 ~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk  261 (596)
T KOG0586|consen  209 LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK  261 (596)
T ss_pred             ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc
Confidence               56789999999999998886 56999999999999999999999865543

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.9e-35  Score=240.32  Aligned_cols=193  Identities=18%  Similarity=0.263  Sum_probs=166.9

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCC---CCCccccceeeEeCCcceEEEe
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLR---NRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      |+.++.||.|+||.||+|.+ .+++.+++|.+.... ......+.+|+.++++++   |+|++++++++......++++|
T Consensus         3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e   82 (277)
T cd06917           3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME   82 (277)
T ss_pred             hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence            55677889999999999995 568899999987643 334556888999999986   9999999999998889999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----  209 (264)
                      |+++++|.+++..   ..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......    
T Consensus        83 ~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~-~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~  158 (277)
T cd06917          83 YAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKV-GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKR  158 (277)
T ss_pred             cCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcccc
Confidence            9999999998853   3688999999999999999999999 9999999999999999999999999998765432    


Q ss_pred             CcccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ....++..|+|||++.++ .++.++|+||||+++|+|++|..||...
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~  205 (277)
T cd06917         159 STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDV  205 (277)
T ss_pred             ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCC
Confidence            223567889999998754 4789999999999999999999998643

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=8.7e-35  Score=240.57  Aligned_cols=192  Identities=16%  Similarity=0.268  Sum_probs=168.0

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      |.++++||.|+||.||++.. .++..+|+|.+..... .....+.+|+..+.+++|+||+++++++...+..++|+||++
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG   85 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence            55777889999999999985 5688999999875432 234568899999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC----cc
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----SY  212 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~----~~  212 (264)
                      +++|.+++.   ...+++..+..++.|++.++.+||+. +++|+||+|+||+++.++.++|+|||++.......    ..
T Consensus        86 ~~~l~~~i~---~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~  161 (277)
T cd06641          86 GGSALDLLE---PGPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF  161 (277)
T ss_pred             CCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHccC-CeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccc
Confidence            999999884   34688999999999999999999999 99999999999999999999999999987544321    23


Q ss_pred             cccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       213 ~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      .++..|+|||.+.+..++.++|+||||+++++|++|..||..
T Consensus       162 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~  203 (277)
T cd06641         162 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSE  203 (277)
T ss_pred             cCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCc
Confidence            567889999999888899999999999999999999999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-36  Score=245.57  Aligned_cols=198  Identities=15%  Similarity=0.152  Sum_probs=170.8

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC--CC----CccccceeeEeCCcce
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLR--NR----RLANLLGCCCEGDERL  129 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--h~----~i~~~~~~~~~~~~~~  129 (264)
                      ..|++++.+|+|+||.|-.+++. .+..||+|+++... .-.+..+-|+++|+++.  .|    -++.+.+++.-.++.+
T Consensus        89 ~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiC  167 (415)
T KOG0671|consen   89 NRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHIC  167 (415)
T ss_pred             cceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceE
Confidence            45889999999999999999954 47899999998544 22345677999999993  23    2788888898899999


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC------------------
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD------------------  191 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~------------------  191 (264)
                      ||+|.+ |.|+++++.++...+++..+++.|+.|++.++.+||+. +++|.||||+|||+.+                  
T Consensus       168 ivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~-kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~  245 (415)
T KOG0671|consen  168 IVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL-KLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRP  245 (415)
T ss_pred             EEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc-ceeecCCChheEEEeccceEEEeccCCccceecc
Confidence            999988 66899999877778999999999999999999999999 9999999999999921                  


Q ss_pred             --CCCeEEcccCCCcccCCCC-cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          192 --DVNPRLSCFGLMKNSRDGR-SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       192 --~~~~kl~dfg~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                        +..++|+|||.|+...... ....|..|+|||++.+-.|+.++||||+||+|.|+++|..+|+.+.+
T Consensus       246 ~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen  314 (415)
T KOG0671|consen  246 LKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHEN  314 (415)
T ss_pred             CCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCc
Confidence              2348999999999876654 44679999999999999999999999999999999999999998774

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=4e-35  Score=240.71  Aligned_cols=196  Identities=18%  Similarity=0.259  Sum_probs=171.4

Q ss_pred             cccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      +++.++.||.|++|.||++... +++.+++|.+..... .....+.+|++.+++++|+||+++++.+...+..++++||+
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM   81 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence            3567778899999999999964 688999999886543 33456889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--Ccc
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSY  212 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~-~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--~~~  212 (264)
                      ++++|.+++... ...++...+..++.|++.|+.+||+ . +++|+||+|+||++++++.++|+|||.+......  ...
T Consensus        82 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~-~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~  159 (265)
T cd06605          82 DGGSLDKILKEV-QGRIPERILGKIAVAVLKGLTYLHEKH-KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTF  159 (265)
T ss_pred             CCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHcCCC-CeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcc
Confidence            999999998642 2678899999999999999999999 8 9999999999999999999999999998654322  225


Q ss_pred             cccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       213 ~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      .++..|+|||.+.+..++.++|+||||+++++|++|+.||...
T Consensus       160 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~  202 (265)
T cd06605         160 VGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPE  202 (265)
T ss_pred             cCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence            6778899999998888999999999999999999999998654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=6.2e-36  Score=236.59  Aligned_cols=189  Identities=17%  Similarity=0.182  Sum_probs=165.6

Q ss_pred             cCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcC-CCCCccccceeeEeC----CcceEEEecCCC
Q 024659           64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEG----DERLLVAEYMPN  137 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~----~~~~lv~e~~~~  137 (264)
                      .||-|-.|.|-.+. ...|+.+|+|++.     +....++|+++.-.. .|+|||.++++|.+.    ..+.+|||.++|
T Consensus        69 vLG~GinGkV~~C~~k~T~ekfALKvL~-----Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meG  143 (400)
T KOG0604|consen   69 VLGAGINGKVVQCVHKRTQEKFALKVLL-----DSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEG  143 (400)
T ss_pred             hhccccCCceEEEEeccchhhhHHHHHh-----cCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccc
Confidence            46999999999988 5668999999986     345678899987776 599999999998652    346789999999


Q ss_pred             CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC---CCCeEEcccCCCcccCCC---Cc
Q 024659          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRDG---RS  211 (264)
Q Consensus       138 ~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~---~~~~kl~dfg~~~~~~~~---~~  211 (264)
                      |.|...+.....+++++.++..|++||+.|+.|||+. +|.||||||+|+|...   +..+||+|||.|+.....   ..
T Consensus       144 GeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~-nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~T  222 (400)
T KOG0604|consen  144 GELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM-NIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMT  222 (400)
T ss_pred             hHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc-chhhccCChhheeeecCCCCcceEecccccccccCCCccccC
Confidence            9999999887778999999999999999999999999 9999999999999963   567999999999876533   34


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCccc
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS  258 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~~  258 (264)
                      ..-|+.|.|||++...+|+..+|+||+||++|-|++|.+||++....
T Consensus       223 Pc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~  269 (400)
T KOG0604|consen  223 PCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL  269 (400)
T ss_pred             CcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc
Confidence            46689999999999899999999999999999999999999987653

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=1.1e-34  Score=240.24  Aligned_cols=188  Identities=19%  Similarity=0.198  Sum_probs=155.9

Q ss_pred             CCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh---hHHHHHHHHHH---HhcCCCCCccccceeeEeCCcceEEEecCCC
Q 024659           65 HGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARA---VGQLRNRRLANLLGCCCEGDERLLVAEYMPN  137 (264)
Q Consensus        65 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~---l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  137 (264)
                      ||+|+||.||++.. .+++.+|+|.+......   ....+.+|..+   +....|++|+.+++.+...+..++||||+++
T Consensus         2 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (279)
T cd05633           2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNG   81 (279)
T ss_pred             cccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCC
Confidence            69999999999995 55889999998754221   12223344433   3344799999999999988899999999999


Q ss_pred             CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--Cccccc
Q 024659          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYSTN  215 (264)
Q Consensus       138 ~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--~~~~~~  215 (264)
                      ++|.+++.  ....+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++......  ....++
T Consensus        82 ~~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~-~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  158 (279)
T cd05633          82 GDLHYHLS--QHGVFSEKEMRFYATEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT  158 (279)
T ss_pred             CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCC
Confidence            99999886  345689999999999999999999999 9999999999999999999999999998654322  234678


Q ss_pred             ccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          216 LAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       216 ~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..|+|||.+.. ..++.++|+||||+++++|++|..||...
T Consensus       159 ~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~  199 (279)
T cd05633         159 HGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQH  199 (279)
T ss_pred             cCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCC
Confidence            99999999864 45899999999999999999999999643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=1.4e-34  Score=240.87  Aligned_cols=197  Identities=15%  Similarity=0.149  Sum_probs=165.1

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcC-CCCCccccceeeEeC-----Ccce
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEG-----DERL  129 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~-----~~~~  129 (264)
                      +.|.+++.||+|+||.||++.. .+++.+|+|.+.... .....+.+|+.+++++ +|+|++++++++...     ...+
T Consensus        22 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~  100 (291)
T cd06639          22 DTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLW  100 (291)
T ss_pred             CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeE
Confidence            4466777889999999999995 568899999987543 2245677899999999 799999999998754     3579


Q ss_pred             EEEecCCCCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          130 LVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      +|+||+++++|.+++...  ....+++..++.++.|++.||.+||+. +++|+||+|+||+++.++.++|+|||++....
T Consensus       101 lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~  179 (291)
T cd06639         101 LVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN-RIIHRDVKGNNILLTTEGGVKLVDFGVSAQLT  179 (291)
T ss_pred             EEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEEcCCCCEEEeecccchhcc
Confidence            999999999999987532  345688999999999999999999999 99999999999999999999999999987543


Q ss_pred             CC----CcccccccccccccccCC-----CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          208 DG----RSYSTNLAFTPPEYLRTG-----RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       208 ~~----~~~~~~~~y~aPE~~~~~-----~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..    ....++..|+|||.+...     .++.++|+||||+++|||++|+.||...
T Consensus       180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~  236 (291)
T cd06639         180 STRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDM  236 (291)
T ss_pred             cccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCC
Confidence            22    234567889999998643     3688999999999999999999998653

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=8.6e-35  Score=241.15  Aligned_cols=195  Identities=19%  Similarity=0.265  Sum_probs=166.1

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      |++++.||.|++|.||++.+ .++..|++|++.....  .....+.+|++.+++++|+|++++++++.+.+..++++||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            45677889999999999995 4689999999875432  22356788999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----Cc
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS  211 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~~  211 (264)
                      + ++|.+++.......+++..+..++.|++.||.|||++ +++|+||+|+||+++.++.++|+|||++......    ..
T Consensus        81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~-~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~  158 (283)
T cd07835          81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH-RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTH  158 (283)
T ss_pred             C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCc
Confidence            5 5899988643434689999999999999999999999 9999999999999999999999999998754322    12


Q ss_pred             ccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..++..|+|||++.+. .++.++|+||||+++|+|++|++||...
T Consensus       159 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~  203 (283)
T cd07835         159 EVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGD  203 (283)
T ss_pred             cccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            2447889999988765 4788999999999999999999998654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=1.1e-34  Score=240.96  Aligned_cols=197  Identities=15%  Similarity=0.177  Sum_probs=164.2

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcC-CCCCccccceeeE-----eCCcce
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCC-----EGDERL  129 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~-----~~~~~~  129 (264)
                      ..|++++.||+|+||.||++.. .+++.+|+|.+.... .....+.+|+.+++++ +|+||+++++++.     .++..+
T Consensus        18 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~   96 (286)
T cd06638          18 DTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLW   96 (286)
T ss_pred             cceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEE
Confidence            3456788889999999999985 557899999886533 2235677899999999 6999999999874     345689


Q ss_pred             EEEecCCCCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          130 LVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      +||||+++++|.+++...  ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++....
T Consensus        97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~  175 (286)
T cd06638          97 LVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN-KTIHRDVKGNNILLTTEGGVKLVDFGVSAQLT  175 (286)
T ss_pred             EEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC-CccccCCCHHhEEECCCCCEEEccCCceeecc
Confidence            999999999999987532  335688899999999999999999999 99999999999999999999999999987543


Q ss_pred             CC----CcccccccccccccccC-----CCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          208 DG----RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       208 ~~----~~~~~~~~y~aPE~~~~-----~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..    ....++..|+|||++..     ..++.++||||||+++|||++|+.||...
T Consensus       176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~  232 (286)
T cd06638         176 STRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADL  232 (286)
T ss_pred             cCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCC
Confidence            32    23357889999999853     34788999999999999999999998643

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=2.5e-34  Score=238.03  Aligned_cols=188  Identities=20%  Similarity=0.216  Sum_probs=157.2

Q ss_pred             CCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh---hHHHHHHHH---HHHhcCCCCCccccceeeEeCCcceEEEecCCC
Q 024659           65 HGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEA---RAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN  137 (264)
Q Consensus        65 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~---~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  137 (264)
                      ||+|+||.||++.. .+++.||+|.+......   ....+..|.   +.++...|++|+++.+.+...+..++|+||+.+
T Consensus         2 ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g   81 (278)
T cd05606           2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG   81 (278)
T ss_pred             cccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCC
Confidence            69999999999995 55889999998754321   111233333   344456799999999999998999999999999


Q ss_pred             CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC--CCccccc
Q 024659          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSYSTN  215 (264)
Q Consensus       138 ~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~--~~~~~~~  215 (264)
                      ++|.+++.  ....+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++.....  .....++
T Consensus        82 ~~L~~~l~--~~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~  158 (278)
T cd05606          82 GDLHYHLS--QHGVFSEAEMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT  158 (278)
T ss_pred             CcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCC
Confidence            99998886  345689999999999999999999999 999999999999999999999999999875432  2234678


Q ss_pred             ccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          216 LAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       216 ~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..|+|||++.++ .++.++|+||+|+++++|++|+.||...
T Consensus       159 ~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~  199 (278)
T cd05606         159 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH  199 (278)
T ss_pred             cCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCC
Confidence            899999999755 5899999999999999999999999755

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-34  Score=237.68  Aligned_cols=197  Identities=16%  Similarity=0.226  Sum_probs=167.4

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcC-CCCCccccceeeEeCC------cc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGD------ER  128 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~------~~  128 (264)
                      +.|++++.||+|++|.||++.. .+++.+++|.+..... ..+.+.+|+++++++ .|+||+++++++....      ..
T Consensus         6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~   84 (275)
T cd06608           6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL   84 (275)
T ss_pred             hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence            5577888899999999999996 4578899999876543 346788999999999 6999999999997644      37


Q ss_pred             eEEEecCCCCCHHHhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCccc
Q 024659          129 LLVAEYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~  206 (264)
                      ++++||+++++|.+++....  +..+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++...
T Consensus        85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~-~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~  163 (275)
T cd06608          85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN-KVIHRDIKGQNILLTKNAEVKLVDFGVSAQL  163 (275)
T ss_pred             EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHHHEEEccCCeEEECCCccceec
Confidence            99999999999999886433  46789999999999999999999999 9999999999999999999999999998654


Q ss_pred             CCC----CcccccccccccccccC-----CCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          207 RDG----RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       207 ~~~----~~~~~~~~y~aPE~~~~-----~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ...    ....++..|+|||++..     ..++.++||||||+++++|++|+.||...
T Consensus       164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  221 (275)
T cd06608         164 DSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDM  221 (275)
T ss_pred             ccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCcccc
Confidence            322    23456788999998753     23788999999999999999999999643

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-34  Score=240.54  Aligned_cols=195  Identities=23%  Similarity=0.285  Sum_probs=166.8

Q ss_pred             ccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeC--CcceEEEe
Q 024659           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLLVAE  133 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e  133 (264)
                      |+++++||.|++|.||++... +++.+|+|.+....  ......+.+|++++++++|+|++++++++...  ...++|+|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            457788999999999999954 58899999998763  33345688899999999999999999999887  78999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC---
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~---  210 (264)
                      |+++ +|.+++.. ....+++..+..++.|++.||.+||+. +++|+||+|+||++++++.++|+|||++.......   
T Consensus        81 ~~~~-~l~~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~-~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~  157 (287)
T cd07840          81 YMDH-DLTGLLDS-PEVKFTESQIKCYMKQLLEGLQYLHSN-GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSAD  157 (287)
T ss_pred             cccc-cHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCcHHHeEEcCCCCEEEccccceeeccCCCccc
Confidence            9975 79888854 235789999999999999999999999 99999999999999999999999999987654432   


Q ss_pred             --cccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 --SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 --~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                        ...++..|+|||.+.+. .++.++||||||++++||++|+.||....
T Consensus       158 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~  206 (287)
T cd07840         158 YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGST  206 (287)
T ss_pred             ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence              23456789999987654 47899999999999999999999986543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=1.5e-34  Score=247.18  Aligned_cols=193  Identities=16%  Similarity=0.231  Sum_probs=164.8

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCC--CChhHHHHHHHHHHHhcCCCCCccccceeeEeC------Cc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEG------DE  127 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~  127 (264)
                      ..|++++.||+|+||.||++.. .+++.||+|.+...  .......+.+|+.++++++|+||+++++++...      ..
T Consensus        16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   95 (353)
T cd07850          16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQD   95 (353)
T ss_pred             cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCc
Confidence            4577888899999999999995 56889999998753  223345677899999999999999999988643      34


Q ss_pred             ceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      .++|+||+.+ +|.+.+..    .++...+..++.|++.||.|||+. |++|+||||+||+++.++.++|+|||++....
T Consensus        96 ~~lv~e~~~~-~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~-gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~  169 (353)
T cd07850          96 VYLVMELMDA-NLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  169 (353)
T ss_pred             EEEEEeccCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEECCCCCEEEccCccceeCC
Confidence            6899999965 78887742    288889999999999999999999 99999999999999999999999999987654


Q ss_pred             CC---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          208 DG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       208 ~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..   ....++..|+|||.+.+..++.++||||||+++++|++|+.||...
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~  220 (353)
T cd07850         170 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGT  220 (353)
T ss_pred             CCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCC
Confidence            32   2235678899999999888999999999999999999999999754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=2.1e-34  Score=239.52  Aligned_cols=197  Identities=17%  Similarity=0.213  Sum_probs=168.6

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeC--CcceEEEe
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLLVAE  133 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e  133 (264)
                      .++.+++||.|++|.||++.+ .+++.+|+|.+..... .....+.+|++++++++|+||+++++++...  +..++|||
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e   81 (287)
T cd06621           2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME   81 (287)
T ss_pred             ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence            456778889999999999996 4588999999886533 3345688999999999999999999998653  36899999


Q ss_pred             cCCCCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--
Q 024659          134 YMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--  209 (264)
                      |+++++|.+++...  ....++...+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......  
T Consensus        82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~-~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~  160 (287)
T cd06621          82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR-KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA  160 (287)
T ss_pred             ecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEecCCeEEEeecccccccccccc
Confidence            99999999876532  345678899999999999999999999 9999999999999999999999999998754322  


Q ss_pred             CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ....++..|+|||.+.+..++.++|+||||+++|+|++|+.||...
T Consensus       161 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  206 (287)
T cd06621         161 GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPE  206 (287)
T ss_pred             ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence            2345678899999999888999999999999999999999998755

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=7.6e-35  Score=239.67  Aligned_cols=191  Identities=24%  Similarity=0.387  Sum_probs=161.3

Q ss_pred             cCCCCCCCeEEEEEeCC-------CCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           64 EHGEKAPNVVYKGKLEN-------QFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      .||.|+||.||++...+       +..+++|.+.... ......+.+|+++++.++|+||+++++++......++++||+
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM   81 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence            46999999999998543       2578999886543 234567889999999999999999999999888999999999


Q ss_pred             CCCCHHHhhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC-----CeEEcccCCCcc
Q 024659          136 PNDTLAKHLFHWE-----TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-----NPRLSCFGLMKN  205 (264)
Q Consensus       136 ~~~sL~~~l~~~~-----~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~-----~~kl~dfg~~~~  205 (264)
                      ++++|.+++....     ...+++.++..++.|++.||.|||+. +++|+||+|+||+++.++     .++++|||++..
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~  160 (269)
T cd05044          82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM-HFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD  160 (269)
T ss_pred             CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC-CcccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence            9999999986421     23478899999999999999999999 999999999999999877     899999999875


Q ss_pred             cCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          206 SRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       206 ~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      .....      ....+..|+|||++.+..++.++||||||+++|||++ |+.||...
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~  217 (269)
T cd05044         161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPAL  217 (269)
T ss_pred             cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCccc
Confidence            43221      2234578999999998889999999999999999998 88888643

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=1.7e-34  Score=240.29  Aligned_cols=192  Identities=19%  Similarity=0.253  Sum_probs=164.9

Q ss_pred             ccccccCCCCCCCeEEEEEe----CCCCEEEEEEeCCCCC----hhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcce
Q 024659           59 ENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAW----PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~  129 (264)
                      |++.+.||.|+||.||++..    .++..||+|++.....    ...+.+.+|+++++++ +|+||+++++.+..+...+
T Consensus         2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~   81 (290)
T cd05613           2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH   81 (290)
T ss_pred             ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence            56778889999999999985    3688999999875321    2345678899999999 5899999999998888899


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~  209 (264)
                      +|+||+++++|.+++..  ...+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus        82 lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~  158 (290)
T cd05613          82 LILDYINGGELFTHLSQ--RERFKEQEVQIYSGEIVLALEHLHKL-GIIYRDIKLENILLDSNGHVVLTDFGLSKEFHED  158 (290)
T ss_pred             EEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence            99999999999999863  45688899999999999999999999 9999999999999999999999999998754332


Q ss_pred             C-----cccccccccccccccCC--CCCCccceechHHHHHHHHhCCCCCC
Q 024659          210 R-----SYSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       210 ~-----~~~~~~~y~aPE~~~~~--~~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                      .     ...++..|+|||.+...  .++.++||||||+++|+|++|..||.
T Consensus       159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~  209 (290)
T cd05613         159 EVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFT  209 (290)
T ss_pred             cccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCC
Confidence            1     23467889999998754  47889999999999999999999985

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=1.8e-34  Score=236.37  Aligned_cols=196  Identities=19%  Similarity=0.250  Sum_probs=168.7

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEe--CCcceEEEe
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLLVAE  133 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e  133 (264)
                      |++++.||.|+||.||++.. .++..+++|.+....  ....+.+.+|++++++++|+||+++++.+..  ....++++|
T Consensus         2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e   81 (265)
T cd08217           2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME   81 (265)
T ss_pred             ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence            66788899999999999984 567899999987543  2334568889999999999999999998754  345789999


Q ss_pred             cCCCCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHh-----cCCCceeeccCCCCeeeCCCCCeEEcccCCCccc
Q 024659          134 YMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCT-----SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (264)
Q Consensus       134 ~~~~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh-----~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~  206 (264)
                      |+++++|.+++...  ....+++..++.++.|++.||.+||     +. +++|+||+|+||++++++.++|+|||++...
T Consensus        82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~-~i~h~dl~p~nili~~~~~~kl~d~g~~~~~  160 (265)
T cd08217          82 YCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN-TVLHRDLKPANIFLDANNNVKLGDFGLAKIL  160 (265)
T ss_pred             hccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC-cceecCCCHHHEEEecCCCEEEecccccccc
Confidence            99999999998643  2457899999999999999999999     88 9999999999999999999999999998865


Q ss_pred             CCCC----cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          207 RDGR----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       207 ~~~~----~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ....    ...++..|+|||++.+..++.++|+||||+++++|++|+.||...
T Consensus       161 ~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  213 (265)
T cd08217         161 GHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTAR  213 (265)
T ss_pred             cCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCc
Confidence            4432    345788999999999888999999999999999999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=1.4e-34  Score=242.97  Aligned_cols=198  Identities=21%  Similarity=0.266  Sum_probs=165.7

Q ss_pred             CCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChh--HHHHHHHHHHHhcCCCCCccccceeeEeC--Ccce
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL  129 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~  129 (264)
                      ..+.|++++.||.|+||.||++.+ .+++.||+|.+.......  ...+.+|+.++++++|+||+++++++...  +..+
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF   84 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence            456688888999999999999995 458899999987543221  23466899999999999999999998754  4579


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~  209 (264)
                      +|+||+.+ +|.+++.. ....+++.++..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus        85 lv~e~~~~-~l~~~l~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~  161 (309)
T cd07845          85 LVMEYCEQ-DLASLLDN-MPTPFSESQVKCLMLQLLRGLQYLHEN-FIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP  161 (309)
T ss_pred             EEEecCCC-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence            99999965 78888764 335789999999999999999999999 9999999999999999999999999998765432


Q ss_pred             C----cccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 R----SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 ~----~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      .    ....+..|+|||.+.+. .++.++|+||||+++|||++|++||...
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~  212 (309)
T cd07845         162 AKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGK  212 (309)
T ss_pred             cCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence            1    12346779999998764 4789999999999999999999998644

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=2.1e-34  Score=241.73  Aligned_cols=198  Identities=20%  Similarity=0.262  Sum_probs=164.1

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh--hHHHHHHHHHHHhcCCCCCccccceeeEeCCc-----
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDE-----  127 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-----  127 (264)
                      .+.|+++++||+|+||.||++.. .+++.||+|.+......  ....+.+|++++++++||||+++++++.....     
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   90 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY   90 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence            45678889999999999999995 46889999998654322  23346789999999999999999999876543     


Q ss_pred             ---ceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCc
Q 024659          128 ---RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (264)
Q Consensus       128 ---~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~  204 (264)
                         .++|+||+.+ +|.+.+.. ....+++.++..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.
T Consensus        91 ~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~  167 (310)
T cd07865          91 KGSFYLVFEFCEH-DLAGLLSN-KNVKFTLSEIKKVMKMLLNGLYYIHRN-KILHRDMKAANILITKDGILKLADFGLAR  167 (310)
T ss_pred             CceEEEEEcCCCc-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEECCCCcEEECcCCCcc
Confidence               4999999965 78887753 334689999999999999999999999 99999999999999999999999999987


Q ss_pred             ccCCCC--------cccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          205 NSRDGR--------SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       205 ~~~~~~--------~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ......        ...++..|+|||.+.+.. ++.++|+||||++++||++|.+||....
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~  228 (310)
T cd07865         168 AFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNT  228 (310)
T ss_pred             cccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence            543221        224567899999987654 7889999999999999999999886543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=1.9e-34  Score=235.62  Aligned_cols=196  Identities=16%  Similarity=0.237  Sum_probs=168.8

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      |.+.+.||.|+||.||++.. .++..+|+|.+....  ....+.+.+|+++++.++|+||+++++.+......++++||+
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   81 (257)
T cd08225           2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYC   81 (257)
T ss_pred             ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecC
Confidence            45677789999999999995 457899999987542  123456789999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC-CeEEcccCCCcccCCCC----
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRDGR----  210 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~-~~kl~dfg~~~~~~~~~----  210 (264)
                      ++++|.+++.......+++..+..++.|++.||.|||+. +++|+||+|+||++++++ .++|+|||.+.......    
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~  160 (257)
T cd08225          82 DGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR-KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAY  160 (257)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEEcCCCCeEEecccccchhccCCccccc
Confidence            999999998654445678999999999999999999999 999999999999999875 57999999987654332    


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ...++..|+|||++.+..++.++|+||||+++++|++|+.||...
T Consensus       161 ~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  205 (257)
T cd08225         161 TCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN  205 (257)
T ss_pred             ccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence            234678899999998888999999999999999999999998643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-34  Score=243.40  Aligned_cols=197  Identities=17%  Similarity=0.199  Sum_probs=165.2

Q ss_pred             ccccccCCCCCCCeEEEEEeC---CCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeC--CcceE
Q 024659           59 ENIVSEHGEKAPNVVYKGKLE---NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLL  130 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~l  130 (264)
                      |.++++||+|+||.||+|...   .+..+|+|.+....   ....+.+.+|+.++.+++||||+++++++...  ...++
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   81 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL   81 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence            567788999999999999954   47899999998733   33345678899999999999999999999887  77999


Q ss_pred             EEecCCCCCHHHhhhcC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC----CCCeEEcccCCC
Q 024659          131 VAEYMPNDTLAKHLFHW---ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD----DVNPRLSCFGLM  203 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~----~~~~kl~dfg~~  203 (264)
                      |+||+++ +|.+.+...   ....++...++.++.|++.||.|||++ +++|+||+|+||+++.    ++.+||+|||++
T Consensus        82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~  159 (316)
T cd07842          82 LFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN-WVLHRDLKPANILVMGEGPERGVVKIGDLGLA  159 (316)
T ss_pred             EEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC-CEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence            9999975 677766422   123688999999999999999999999 9999999999999998    899999999998


Q ss_pred             cccCCCC-------cccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          204 KNSRDGR-------SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       204 ~~~~~~~-------~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                      .......       ...++..|+|||++.+. .++.++||||||+++++|++|++||.....
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~  221 (316)
T cd07842         160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREA  221 (316)
T ss_pred             cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcc
Confidence            7643321       23457889999988764 478999999999999999999999975543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=4.6e-34  Score=240.40  Aligned_cols=194  Identities=19%  Similarity=0.236  Sum_probs=166.6

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC---hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      +..+++||.|+||.||+|.. .++..+++|.+.....   .....+.+|+++++.++|+|++++++++.+.+..++++||
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            44556789999999999995 5688999999875432   2335678899999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCcccc
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST  214 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~  214 (264)
                      +.+ ++.+++.. ....+++.++..++.|++.++.|||+. |++|+||+|+||+++.++.++|+|||++..........+
T Consensus       103 ~~~-~l~~~l~~-~~~~l~~~~~~~~~~qi~~al~~LH~~-gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~  179 (313)
T cd06633         103 CLG-SASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSH-NMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVG  179 (313)
T ss_pred             CCC-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccc
Confidence            965 68777753 345689999999999999999999999 999999999999999999999999999876655556677


Q ss_pred             ccccccccccc---CCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          215 NLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       215 ~~~y~aPE~~~---~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      +..|+|||++.   ...++.++|+||||+++++|++|..||...
T Consensus       180 ~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~  223 (313)
T cd06633         180 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM  223 (313)
T ss_pred             cccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            88999999984   355888999999999999999999998654

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-34  Score=245.85  Aligned_cols=194  Identities=19%  Similarity=0.280  Sum_probs=163.0

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeC-----Ccce
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEG-----DERL  129 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~  129 (264)
                      +.|++++.||+|+||.||++.+ .+++.||+|.+.... ......+.+|+.++++++|+||+++++++...     ...+
T Consensus         5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   84 (336)
T cd07849           5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVY   84 (336)
T ss_pred             cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEE
Confidence            3477888899999999999984 568899999987532 23345678899999999999999999987643     3478


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~  209 (264)
                      +++||+.+ +|.+.+.   ...+++..+..++.|++.||.+||+. +++|+||||+||+++.++.++|+|||++......
T Consensus        85 lv~e~~~~-~l~~~~~---~~~l~~~~~~~i~~ql~~aL~~LH~~-~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~  159 (336)
T cd07849          85 IVQELMET-DLYKLIK---TQHLSNDHIQYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTNCDLKICDFGLARIADPE  159 (336)
T ss_pred             EEehhccc-CHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence            99999965 7887773   45689999999999999999999999 9999999999999999999999999998754322


Q ss_pred             -------CcccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 -------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 -------~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                             ....++..|+|||.+.+ ..++.++||||||+++++|++|++||...
T Consensus       160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~  213 (336)
T cd07849         160 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGK  213 (336)
T ss_pred             ccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence                   12356788999998765 45899999999999999999999999653

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=2.2e-34  Score=235.87  Aligned_cols=188  Identities=21%  Similarity=0.226  Sum_probs=164.5

Q ss_pred             CCCCCCCeEEEEEeC-CCCEEEEEEeCCCCC---hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCCH
Q 024659           65 HGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL  140 (264)
Q Consensus        65 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL  140 (264)
                      ||.|+||.||++.+. +++.+++|.+.....   ...+.+.+|++++++++|+||+++++.+......++++||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            589999999999975 488999999976543   3345688899999999999999999999988999999999999999


Q ss_pred             HHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-----------
Q 024659          141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----------  209 (264)
Q Consensus       141 ~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-----------  209 (264)
                      .+++.+  ...+++..+..++.|++.||.+||+. +++|+||+|+||++++++.++|+|||++......           
T Consensus        81 ~~~l~~--~~~~~~~~~~~i~~qi~~~L~~lH~~-~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  157 (265)
T cd05579          81 ASLLEN--VGSLDEDVARIYIAEIVLALEYLHSN-GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE  157 (265)
T ss_pred             HHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHc-CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccc
Confidence            999864  23689999999999999999999999 9999999999999999999999999997754322           


Q ss_pred             -CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 -~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                       ....++..|+|||......++.++|+||||++++++++|..||...
T Consensus       158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~  204 (265)
T cd05579         158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGE  204 (265)
T ss_pred             ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence             1234567899999998888999999999999999999999998644

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=2.9e-34  Score=236.25  Aligned_cols=197  Identities=19%  Similarity=0.281  Sum_probs=166.2

Q ss_pred             ccccccCCCCCCCeEEEEEeCC--CCEEEEEEeCCCC----------ChhHHHHHHHHHHHhc-CCCCCccccceeeEeC
Q 024659           59 ENIVSEHGEKAPNVVYKGKLEN--QFRIAVKRFNRSA----------WPDARQFLEEARAVGQ-LRNRRLANLLGCCCEG  125 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~  125 (264)
                      |++++.||.|+||.||++.+..  ++.+|+|.+....          .....++.+|+.++.+ ++|+||+++++++...
T Consensus         2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   81 (269)
T cd08528           2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN   81 (269)
T ss_pred             chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence            5667788999999999999654  7889999886422          1223456778888765 7999999999999999


Q ss_pred             CcceEEEecCCCCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCC
Q 024659          126 DERLLVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (264)
Q Consensus       126 ~~~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~  203 (264)
                      +..++++||+++++|.+++...  ....+++..++.++.|++.||.+||+..+++|+||+|+||+++.++.++|+|||.+
T Consensus        82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~  161 (269)
T cd08528          82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLA  161 (269)
T ss_pred             CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccce
Confidence            9999999999999999887432  34568899999999999999999996328999999999999999999999999998


Q ss_pred             cccCCC---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          204 KNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       204 ~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ......   ....++..|+|||++.+..++.++|+||||+++|+|++|+.||...
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~  216 (269)
T cd08528         162 KQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYST  216 (269)
T ss_pred             eecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCccccc
Confidence            765443   2345678899999999888999999999999999999999998643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=3.7e-34  Score=237.03  Aligned_cols=193  Identities=19%  Similarity=0.231  Sum_probs=161.1

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCC-CCCccccceeeEeC--CcceEEEe
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLR-NRRLANLLGCCCEG--DERLLVAE  133 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~--~~~~lv~e  133 (264)
                      |+++++||+|+||.||++.. .+++.+|+|.+..... .......+|+..+.++. |+|++++++++.+.  +..++|+|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            45778899999999999994 5688999999876421 22233457888899885 99999999999887  78999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---C
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---R  210 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---~  210 (264)
                      |+.+ +|.+.+.. ....+++..+..++.|++.||.|||+. +++|+||+|+||+++. +.++|+|||++......   .
T Consensus        81 ~~~~-~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~-~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~  156 (282)
T cd07831          81 LMDM-NLYELIKG-RKRPLPEKRVKSYMYQLLKSLDHMHRN-GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYT  156 (282)
T ss_pred             cCCc-cHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CceecccCHHHEEEcC-CCeEEEecccccccccCCCcC
Confidence            9975 78887754 235689999999999999999999999 9999999999999999 99999999998765332   2


Q ss_pred             cccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          211 SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ...++..|+|||++.. ..++.++|+|||||+++||++|.+||...
T Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~  202 (282)
T cd07831         157 EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGT  202 (282)
T ss_pred             CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCC
Confidence            3356788999997654 45788999999999999999999999654

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=2.3e-34  Score=238.58  Aligned_cols=196  Identities=18%  Similarity=0.289  Sum_probs=167.0

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      |+++++||.|++|.||++.. .++..||+|.+...... ....+.+|++++++++|+||+++++++...+..++|+||++
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   81 (284)
T cd07836           2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD   81 (284)
T ss_pred             ceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC
Confidence            56788899999999999996 46889999999865432 24567789999999999999999999999999999999997


Q ss_pred             CCCHHHhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----Cc
Q 024659          137 NDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS  211 (264)
Q Consensus       137 ~~sL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~~  211 (264)
                      + +|.+++.... ...+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++......    ..
T Consensus        82 ~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~  159 (284)
T cd07836          82 K-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN-RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSN  159 (284)
T ss_pred             c-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccccc
Confidence            5 7888875422 34689999999999999999999999 9999999999999999999999999998754322    22


Q ss_pred             ccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          212 YSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ..++..|++||++.+. .++.++|+||||+++++|++|+.||....
T Consensus       160 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~  205 (284)
T cd07836         160 EVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTN  205 (284)
T ss_pred             ccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            3457889999998664 47889999999999999999999987543

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.6e-35  Score=252.16  Aligned_cols=197  Identities=19%  Similarity=0.221  Sum_probs=170.1

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC---hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      +.+..|+.||-|+||.|-++.. +....+|+|.+.+...   ........|..+|..-+.+-||++|-.|++.+.+|+||
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM  708 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM  708 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence            5567899999999999999984 5567889999986542   22344677899999999999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC---C-
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR---D-  208 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~---~-  208 (264)
                      +|++||++-.+|-  ...-|.+..++.++..+.+|+.++|.. |+|||||||+|||||.+|.+||.|||+++-+.   + 
T Consensus       709 dYIPGGDmMSLLI--rmgIFeE~LARFYIAEltcAiesVHkm-GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHds  785 (1034)
T KOG0608|consen  709 DYIPGGDMMSLLI--RMGIFEEDLARFYIAELTCAIESVHKM-GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS  785 (1034)
T ss_pred             eccCCccHHHHHH--HhccCHHHHHHHHHHHHHHHHHHHHhc-cceecccCccceEEccCCceeeeeccccccceecccc
Confidence            9999999988875  345678888999999999999999999 99999999999999999999999999986210   0 


Q ss_pred             -----C-------------------------------------CcccccccccccccccCCCCCCccceechHHHHHHHH
Q 024659          209 -----G-------------------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLL  246 (264)
Q Consensus       209 -----~-------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~  246 (264)
                           +                                     ....||..|+|||++....++..+|+||.|++||||+
T Consensus       786 kYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~  865 (1034)
T KOG0608|consen  786 KYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEML  865 (1034)
T ss_pred             ccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHh
Confidence                 0                                     0235789999999999999999999999999999999


Q ss_pred             hCCCCCCCCc
Q 024659          247 SGKHIPPSHV  256 (264)
Q Consensus       247 ~g~~~~~~~~  256 (264)
                      .|++||-...
T Consensus       866 ~g~~pf~~~t  875 (1034)
T KOG0608|consen  866 VGQPPFLADT  875 (1034)
T ss_pred             hCCCCccCCC
Confidence            9999996544

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.6e-34  Score=232.19  Aligned_cols=194  Identities=19%  Similarity=0.264  Sum_probs=171.4

Q ss_pred             ccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      |.+.+.||+|++|.||++... +++.+++|.+.....  .....+.+|++++.+++|+|++++++++...+..++++||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (254)
T cd06627           2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA   81 (254)
T ss_pred             ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence            566778899999999999854 578999999987654  34567899999999999999999999999989999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc----
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS----  211 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~----  211 (264)
                      ++++|.+++..  ...+++..+..++.|++.++.+||++ +++|+||+|+||+++.++.++|+|||.+........    
T Consensus        82 ~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~  158 (254)
T cd06627          82 ENGSLRQIIKK--FGPFPESLVAVYVYQVLQGLAYLHEQ-GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDAS  158 (254)
T ss_pred             CCCcHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccc
Confidence            99999999864  35789999999999999999999999 999999999999999999999999999886554332    


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..++..|+|||...+..++.++|+||||+++++|++|..||...
T Consensus       159 ~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~  202 (254)
T cd06627         159 VVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDL  202 (254)
T ss_pred             cccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCc
Confidence            45678899999998777899999999999999999999998643

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-35  Score=252.81  Aligned_cols=194  Identities=22%  Similarity=0.346  Sum_probs=172.2

Q ss_pred             ccccccCCCCCCCeEEEEEeCC-CCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCC
Q 024659           59 ENIVSEHGEKAPNVVYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN  137 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  137 (264)
                      ..+-.+||-|.||.||.|.|.. ...||||.++... -..++|..|+.+++.++|||+++++|+|.....+|||+||+..
T Consensus       269 ItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~y  347 (1157)
T KOG4278|consen  269 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCY  347 (1157)
T ss_pred             eeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccC
Confidence            3455688999999999999765 5789999998655 3568899999999999999999999999999999999999999


Q ss_pred             CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCcc--cc-
Q 024659          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--ST-  214 (264)
Q Consensus       138 ~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~~--~~-  214 (264)
                      |+|.++|++.....++.-..+.|+.||..|+.||..+ ++|||||.+.|.|+.++..+|+.|||+++++......  .| 
T Consensus       348 GNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk-nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGA  426 (1157)
T KOG4278|consen  348 GNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGA  426 (1157)
T ss_pred             ccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh-hhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCc
Confidence            9999999987777888888999999999999999999 9999999999999999999999999999987654332  22 


Q ss_pred             --cccccccccccCCCCCCccceechHHHHHHHHhCCC-CCCC
Q 024659          215 --NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKH-IPPS  254 (264)
Q Consensus       215 --~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~-~~~~  254 (264)
                        .+.|.|||.+..+.++.++|||+||++|||+.|... |+++
T Consensus       427 KFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG  469 (1157)
T KOG4278|consen  427 KFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG  469 (1157)
T ss_pred             cCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCC
Confidence              478999999999999999999999999999988664 4443

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=4.7e-34  Score=239.80  Aligned_cols=193  Identities=19%  Similarity=0.232  Sum_probs=166.3

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCC---CChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      |..++.||.|+||.||+|.. .++..+++|.+...   ......++.+|+++++.++|+|++++.+++......++|+||
T Consensus        17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   96 (308)
T cd06634          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY   96 (308)
T ss_pred             HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence            55677889999999999995 46788999998643   222345678899999999999999999999999899999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCcccc
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST  214 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~  214 (264)
                      +. +++.+.+.. ....+++.++..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++..........+
T Consensus        97 ~~-~~l~~~~~~-~~~~l~~~~~~~~~~~l~~~l~~LH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~  173 (308)
T cd06634          97 CL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVG  173 (308)
T ss_pred             cC-CCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHhEEECCCCcEEECCcccceeecCcccccC
Confidence            96 578777643 345688999999999999999999999 999999999999999999999999999887666666678


Q ss_pred             ccccccccccc---CCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          215 NLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       215 ~~~y~aPE~~~---~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      +..|+|||.+.   ...++.++||||||+++|+|++|..||..
T Consensus       174 ~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~  216 (308)
T cd06634         174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN  216 (308)
T ss_pred             CccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcc
Confidence            88999999975   34578899999999999999999998864

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-34  Score=238.27  Aligned_cols=195  Identities=20%  Similarity=0.284  Sum_probs=168.2

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh--hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      |++++.||.|++|.||++.. .+++.+++|.+......  ....+.+|++++++++|+||+++++++..++..++++||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            45677889999999999995 46889999998765432  3456888999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC----c
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S  211 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~----~  211 (264)
                      ++ +|.+++.. ....+++..+..++.|++.||.+||+. +++|+||+|+||+++.++.++|+|||.+.......    .
T Consensus        81 ~~-~l~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~  157 (283)
T cd05118          81 DT-DLYKLIKD-RQRGLPESLIKSYLYQLLQGLAFCHSH-GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTH  157 (283)
T ss_pred             CC-CHHHHHHh-hcccCCHHHHHHHHHHHHHHHHHHHHC-CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccC
Confidence            76 78888764 335789999999999999999999999 99999999999999999999999999987654432    2


Q ss_pred             ccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          212 YSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ..++..|+|||.+.+. .++.++|+||||+++++|++|+.||+...
T Consensus       158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~  203 (283)
T cd05118         158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKS  203 (283)
T ss_pred             ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence            3466789999999876 68999999999999999999999986543

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=4e-34  Score=238.49  Aligned_cols=196  Identities=16%  Similarity=0.188  Sum_probs=162.6

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh--hHHHHHHHHHHHhcCC-CCCccccceeeEeCCc-----c
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLR-NRRLANLLGCCCEGDE-----R  128 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~-----~  128 (264)
                      .|++.+.||+|+||.||++.+ .+++.||+|.+......  ....+.+|+.+++++. |+||+++++++.....     .
T Consensus         2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~   81 (295)
T cd07837           2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL   81 (295)
T ss_pred             CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence            366777889999999999995 46889999998754322  2356788999999995 6999999999877655     7


Q ss_pred             eEEEecCCCCCHHHhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC-CCCeEEcccCCCc
Q 024659          129 LLVAEYMPNDTLAKHLFHWE---TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMK  204 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~-~~~~kl~dfg~~~  204 (264)
                      ++++||+++ +|.+++....   ...+++..+..++.||+.||.|||++ +++|+||+|+||+++. ++.++|+|||++.
T Consensus        82 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~-~i~H~dl~~~nil~~~~~~~~kl~dfg~~~  159 (295)
T cd07837          82 YLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH-GVMHRDLKPQNLLVDKQKGLLKIADLGLGR  159 (295)
T ss_pred             EEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChHHEEEecCCCeEEEeecccce
Confidence            999999986 7888875422   34689999999999999999999999 9999999999999998 8999999999987


Q ss_pred             ccCCC----CcccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          205 NSRDG----RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       205 ~~~~~----~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      .....    ....+++.|+|||++.+. .++.++|+||||+++|+|++|..||...
T Consensus       160 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~  215 (295)
T cd07837         160 AFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGD  215 (295)
T ss_pred             ecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCC
Confidence            54322    222456789999988754 4789999999999999999999998653

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=2.1e-34  Score=239.52  Aligned_cols=196  Identities=19%  Similarity=0.217  Sum_probs=162.5

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCC-CCCccccceeeEeCCcceEEEecC
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      ++.++.||.|+||.||++.. .+++.+|+|.+..... .....+.+|+..+.++. |+||+++++++..++..++++||+
T Consensus         6 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~   85 (288)
T cd06616           6 LKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELM   85 (288)
T ss_pred             hHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecc
Confidence            44566789999999999995 4588999999976532 33456888999999996 999999999999888899999998


Q ss_pred             CCCCHHHhhh---cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---
Q 024659          136 PNDTLAKHLF---HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (264)
Q Consensus       136 ~~~sL~~~l~---~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---  209 (264)
                      .. ++.++..   ......+++..+..++.|++.||+|||+..+++||||||+||+++.++.++|+|||++......   
T Consensus        86 ~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~  164 (288)
T cd06616          86 DI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAK  164 (288)
T ss_pred             cC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCcc
Confidence            64 5655432   2234678999999999999999999997448999999999999999999999999998754332   


Q ss_pred             CcccccccccccccccCC---CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 RSYSTNLAFTPPEYLRTG---RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~~---~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ....++..|+|||++.+.   .++.++||||||+++++|++|+.||...
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~  213 (288)
T cd06616         165 TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKW  213 (288)
T ss_pred             ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhc
Confidence            233567889999999876   5899999999999999999999998643

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=4.1e-34  Score=238.61  Aligned_cols=195  Identities=12%  Similarity=0.055  Sum_probs=151.3

Q ss_pred             ccccccccCCCCCCCeEEEEEeCC----CCEEEEEEeCCCCChhH-H----------HHHHHHHHHhcCCCCCcccccee
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWPDA-R----------QFLEEARAVGQLRNRRLANLLGC  121 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~-~----------~~~~e~~~l~~l~h~~i~~~~~~  121 (264)
                      ..|++.+.||+|+||.||+|.+.+    +..+++|.......... +          ....++..+..++|+++++++++
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~   91 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC   91 (294)
T ss_pred             CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence            457888899999999999999544    45666666443322111 1          12233445667789999999998


Q ss_pred             eEeCC----cceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEE
Q 024659          122 CCEGD----ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL  197 (264)
Q Consensus       122 ~~~~~----~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl  197 (264)
                      +....    ..+++++++.. ++.+.+..  ....++..+..++.|++.||.|||+. +++||||||+||+++.++.++|
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiHrDiKp~Nill~~~~~~~l  167 (294)
T PHA02882         92 GSFKRCRMYYRFILLEKLVE-NTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEH-GISHGDIKPENIMVDGNNRGYI  167 (294)
T ss_pred             eeEecCCceEEEEEEehhcc-CHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCcEEE
Confidence            76543    24677887643 67766642  23457888899999999999999999 9999999999999999999999


Q ss_pred             cccCCCcccCC-----------CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          198 SCFGLMKNSRD-----------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       198 ~dfg~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      +|||+++....           .....+|+.|+|||+..+..++.++|||||||+++||++|+.||...
T Consensus       168 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~  236 (294)
T PHA02882        168 IDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGF  236 (294)
T ss_pred             EEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCcc
Confidence            99999875421           12235789999999999888999999999999999999999999755

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=5.1e-34  Score=242.50  Aligned_cols=194  Identities=19%  Similarity=0.292  Sum_probs=164.3

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCC--CChhHHHHHHHHHHHhcCCCCCccccceeeEeC-----Ccce
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEG-----DERL  129 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~  129 (264)
                      .|.+++.||.|+||.||++.. .+++.||+|.+...  .......+.+|+.+++.++|+||+++++++...     ...+
T Consensus         6 ~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~   85 (337)
T cd07858           6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVY   85 (337)
T ss_pred             ceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEE
Confidence            467788889999999999994 56889999998754  222345677899999999999999999988653     3479


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~  209 (264)
                      +++||+. ++|.+++.  ....+++..+..++.|++.||.|||++ +++|+||+|+||+++.++.++|+|||++......
T Consensus        86 lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~-~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~  161 (337)
T cd07858          86 IVYELMD-TDLHQIIR--SSQTLSDDHCQYFLYQLLRGLKYIHSA-NVLHRDLKPSNLLLNANCDLKICDFGLARTTSEK  161 (337)
T ss_pred             EEEeCCC-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence            9999996 57988886  345689999999999999999999999 9999999999999999999999999998765433


Q ss_pred             ----CcccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 ----RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 ----~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                          ....++..|+|||.+.. ..++.++|+||||+++++|++|++||...
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~  212 (337)
T cd07858         162 GDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGK  212 (337)
T ss_pred             cccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCC
Confidence                23356788999998865 45889999999999999999999999653

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.8e-34  Score=243.26  Aligned_cols=194  Identities=22%  Similarity=0.332  Sum_probs=168.1

Q ss_pred             ccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCC-----cceE
Q 024659           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ERLL  130 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~l  130 (264)
                      |.+.+.||.|++|.||++... .++.+++|.+....  ....+.+.+|+++++.++|+||+++.+++....     ..++
T Consensus         2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l   81 (330)
T cd07834           2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI   81 (330)
T ss_pred             ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence            567788899999999999964 48899999998643  334567889999999999999999999987765     7899


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~  210 (264)
                      +++|+++ +|.+++.  ....+++..+..++.|++.||.+||+. |++|+||||+||+++.++.++|+|||++.......
T Consensus        82 v~e~~~~-~l~~~l~--~~~~l~~~~~~~i~~~l~~~l~~LH~~-gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~  157 (330)
T cd07834          82 VTELMET-DLHKVIK--SPQPLTDDHIQYFLYQILRGLKYLHSA-NVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDE  157 (330)
T ss_pred             Eecchhh-hHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEcccCceEeecccc
Confidence            9999975 7988886  334789999999999999999999999 99999999999999999999999999988654432


Q ss_pred             -------cccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 -------SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 -------~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                             ...++..|+|||++.+. .++.++|+||||+++++|++|.+||....
T Consensus       158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~  211 (330)
T cd07834         158 DEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRD  211 (330)
T ss_pred             cccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCC
Confidence                   23467889999999887 78999999999999999999999997543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=3.7e-34  Score=243.04  Aligned_cols=194  Identities=17%  Similarity=0.272  Sum_probs=163.3

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEe----CCcceE
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLL  130 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~l  130 (264)
                      .|++.+.||.|++|.||++.. .++..||+|++....  ......+.+|+.++++++|+||+++++++..    ....++
T Consensus         6 ~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l   85 (334)
T cd07855           6 RYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYV   85 (334)
T ss_pred             ceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEE
Confidence            456777889999999999994 568899999987643  2334567789999999999999999998753    346789


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-  209 (264)
                      |+||+. ++|.+++.  ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++...... 
T Consensus        86 v~e~~~-~~l~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~  161 (334)
T cd07855          86 VMDLME-SDLHHIIH--SDQPLTEEHIRYFLYQLLRGLKYIHSA-NVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSP  161 (334)
T ss_pred             EEehhh-hhHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCcEEecccccceeecccC
Confidence            999995 58998885  344589999999999999999999999 9999999999999999999999999998754322 


Q ss_pred             -------CcccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 -------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 -------~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                             ....++..|+|||.+.+ ..++.++||||||+++|||++|+.||...
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~  215 (334)
T cd07855         162 TEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGK  215 (334)
T ss_pred             cCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCC
Confidence                   12356788999999866 45889999999999999999999999654

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=1.1e-33  Score=230.67  Aligned_cols=196  Identities=18%  Similarity=0.237  Sum_probs=172.1

Q ss_pred             ccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      |.+++.||.|+||.||++... ++..+++|++.....  .....+.+|+++++.++|+|++++.+.+......++++||+
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~   81 (258)
T cd08215           2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYA   81 (258)
T ss_pred             ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEec
Confidence            567778899999999999954 588999999986543  44567889999999999999999999999889999999999


Q ss_pred             CCCCHHHhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC---
Q 024659          136 PNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (264)
Q Consensus       136 ~~~sL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~---  210 (264)
                      ++++|.+++....  ...+++..+..++.+++.||.+||+. +++|+||+|+||++++++.++|+|||.+.......   
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~-~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~  160 (258)
T cd08215          82 DGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR-KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLA  160 (258)
T ss_pred             CCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC-CEecccCChHHeEEcCCCcEEECCccceeecccCccee
Confidence            9999999987532  46789999999999999999999999 99999999999999999999999999987654432   


Q ss_pred             -cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       211 -~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                       ...++..|+|||...+..++.++|+||+|+++++|++|+.||...
T Consensus       161 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~  206 (258)
T cd08215         161 KTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGE  206 (258)
T ss_pred             cceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCC
Confidence             235678899999998888999999999999999999999998543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1e-33  Score=241.42  Aligned_cols=203  Identities=20%  Similarity=0.292  Sum_probs=166.3

Q ss_pred             CHHHHHHHhCCCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCcccccee
Q 024659           45 SIETLRTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGC  121 (264)
Q Consensus        45 ~~~~~~~~~~~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~  121 (264)
                      ...++...++   .|.+++.||+|+||.||++.. .+++.||+|++....  ....+.+.+|++++++++|+||++++++
T Consensus         8 ~~~~~~~~~~---~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~   84 (345)
T cd07877           8 LNKTIWEVPE---RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV   84 (345)
T ss_pred             HHHHHhhccC---ceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeee
Confidence            3444544444   456777889999999999984 568899999997542  2234567889999999999999999998


Q ss_pred             eEeC------CcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCe
Q 024659          122 CCEG------DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP  195 (264)
Q Consensus       122 ~~~~------~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~  195 (264)
                      +...      ...+++++++ +++|.+++.   ...+++..+..++.|++.||.|||+. +++|+||+|+||++++++.+
T Consensus        85 ~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~~~~~  159 (345)
T cd07877          85 FTPARSLEEFNDVYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCEL  159 (345)
T ss_pred             eeecccccccccEEEEehhc-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChHHEEEcCCCCE
Confidence            8643      3367788776 778988874   34589999999999999999999999 99999999999999999999


Q ss_pred             EEcccCCCcccCCCC-cccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          196 RLSCFGLMKNSRDGR-SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       196 kl~dfg~~~~~~~~~-~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      +|+|||++....... ...++..|+|||.+.+ ..++.++||||||+++++|++|+.||...
T Consensus       160 kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~  221 (345)
T cd07877         160 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT  221 (345)
T ss_pred             EEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            999999987654332 3456788999999876 45888999999999999999999998643

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.2e-36  Score=251.11  Aligned_cols=201  Identities=17%  Similarity=0.193  Sum_probs=179.3

Q ss_pred             CCCccccccccCCCCCCCeEEEEEeCCCC-EEEEEEeCCC---CChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcce
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGKLENQF-RIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~~~~~~-~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  129 (264)
                      -.+++.+++..||-|+||.|=++..++.. .+|+|++++.   ...+.+.+..|-.+|...+.+.|+++|..|.+....|
T Consensus       417 v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvY  496 (732)
T KOG0614|consen  417 VKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVY  496 (732)
T ss_pred             cchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhh
Confidence            34566788999999999999999966543 4888888764   3334566888999999999999999999999999999


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~  209 (264)
                      +.||-|-||.|+..++  ..+.|...+...++.-++.|+.|||++ ||++|||||+|.+++.+|-+||.|||.|+....+
T Consensus       497 mLmEaClGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k-~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g  573 (732)
T KOG0614|consen  497 MLMEACLGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRK-GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG  573 (732)
T ss_pred             hhHHhhcCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhc-CceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence            9999999999999997  556788999999999999999999999 9999999999999999999999999999987765


Q ss_pred             C---cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          210 R---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       210 ~---~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                      .   +++||+.|.|||++.+...+..+|.||||++++||++|.+||++.+.
T Consensus       574 ~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dp  624 (732)
T KOG0614|consen  574 RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDP  624 (732)
T ss_pred             CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCch
Confidence            4   46899999999999999999999999999999999999999986543

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=4.5e-34  Score=236.11  Aligned_cols=196  Identities=21%  Similarity=0.245  Sum_probs=170.0

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCC-CCCccccceeeEeCCcceEEE
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      .|.+.+.||.|+||.||++.. .+++.+++|.+....   ......+.+|++++++++ |+||+++++++...+..+++|
T Consensus         2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~   81 (280)
T cd05581           2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL   81 (280)
T ss_pred             CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence            467788899999999999995 468899999987532   222456788999999998 999999999999889999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC--
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--  210 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~--  210 (264)
                      |++.+++|.+++..  ...+++..+..++.|++.||.+||+. +++|+||+|+||+++.++.++|+|||++.......  
T Consensus        82 e~~~~~~L~~~l~~--~~~l~~~~~~~i~~ql~~~l~~Lh~~-~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~  158 (280)
T cd05581          82 EYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLALEYLHSK-GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP  158 (280)
T ss_pred             cCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence            99999999999963  34799999999999999999999999 99999999999999999999999999987543322  


Q ss_pred             ----------------------cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 ----------------------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 ----------------------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                                            ...++..|+|||......++.++|+||||++++++++|+.||....
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~  226 (280)
T cd05581         159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN  226 (280)
T ss_pred             ccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc
Confidence                                  1235678999999988889999999999999999999999987543

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=100.00  E-value=5.6e-35  Score=220.11  Aligned_cols=194  Identities=18%  Similarity=0.213  Sum_probs=165.2

Q ss_pred             cccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCC-CChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEEEecCC
Q 024659           60 NIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS-AWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        60 ~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      ..+.+||.|++|.|-+.+ ..+|...|+|++... +.+...+..+|+.+..+. .+|.++.++|........+|.||.+.
T Consensus        49 ~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~  128 (282)
T KOG0984|consen   49 VGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMD  128 (282)
T ss_pred             hhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhh
Confidence            456688999999999999 577999999999864 334456677888887666 69999999999999999999999995


Q ss_pred             CCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc---
Q 024659          137 NDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS---  211 (264)
Q Consensus       137 ~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~---  211 (264)
                      . ||..+-++.  .+..+++..+-+|+..+..||.|||++..++|||+||+|||++.+|.+|++|||++....+.-.   
T Consensus       129 t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~  207 (282)
T KOG0984|consen  129 T-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTM  207 (282)
T ss_pred             h-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHH
Confidence            5 788776543  5678899999999999999999999998999999999999999999999999999876555422   


Q ss_pred             ccccccccccccccCC----CCCCccceechHHHHHHHHhCCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTG----RVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~----~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      ..|...|+|||.+...    .|+.++||||||+++.||.+++.|+..
T Consensus       208 daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~  254 (282)
T KOG0984|consen  208 DAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES  254 (282)
T ss_pred             hcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence            3567889999988532    489999999999999999999998764

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=9.3e-34  Score=234.87  Aligned_cols=195  Identities=17%  Similarity=0.301  Sum_probs=165.4

Q ss_pred             ccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCC-CCCccccceeeEeCCcceEEEecC
Q 024659           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      |.+++.||.|++|.||+|... +++.|++|++...... ......+|+..+++++ |+|++++++++...+..++||||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            456778899999999999964 5788999998754321 2223457899999999 999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---Ccc
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSY  212 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---~~~  212 (264)
                       +++|.+.+.......+++..+..++.|++.+|.|||++ +++|+||+|+||+++.++.++|+|||++......   ...
T Consensus        81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~-~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~  158 (283)
T cd07830          81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH-GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDY  158 (283)
T ss_pred             -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCC
Confidence             77899988653445789999999999999999999999 9999999999999999999999999998765433   223


Q ss_pred             cccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          213 STNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       213 ~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      .++..|+|||++.+. .++.++|+||||++++||++|++||+..
T Consensus       159 ~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~  202 (283)
T cd07830         159 VSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGS  202 (283)
T ss_pred             CCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCC
Confidence            567889999988644 4789999999999999999999998643

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=1.5e-33  Score=232.48  Aligned_cols=195  Identities=20%  Similarity=0.318  Sum_probs=160.0

Q ss_pred             cccccCCCCCCCeEEEEEeC----CCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCC------c
Q 024659           60 NIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD------E  127 (264)
Q Consensus        60 ~~l~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~  127 (264)
                      .+.+.||+|+||.||+|.+.    .++.+|+|.+....  ....+.+.+|++++++++||||+++++++....      .
T Consensus         2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   81 (273)
T cd05074           2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPI   81 (273)
T ss_pred             cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccc
Confidence            45667899999999999853    36789999987643  233556889999999999999999999886532      2


Q ss_pred             ceEEEecCCCCCHHHhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCC
Q 024659          128 RLLVAEYMPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~----~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~  203 (264)
                      .+++++|+.+++|.+++...    ....++...+..++.|++.||.|||++ +++|+||||+||+++.++.++|+|||++
T Consensus        82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~nili~~~~~~kl~dfg~~  160 (273)
T cd05074          82 PMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK-NFIHRDLAARNCMLNENMTVCVADFGLS  160 (273)
T ss_pred             eEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccchhhEEEcCCCCEEECccccc
Confidence            36888999999998876421    122578889999999999999999999 9999999999999999999999999998


Q ss_pred             cccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          204 KNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       204 ~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      +......      ...++..|++||.+.+..++.++||||||+++|+|++ |++||...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~  219 (273)
T cd05074         161 KKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGV  219 (273)
T ss_pred             ccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCC
Confidence            7653321      2234567999999988889999999999999999999 77877543

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.1e-33  Score=241.07  Aligned_cols=194  Identities=18%  Similarity=0.266  Sum_probs=164.7

Q ss_pred             ccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCC------c
Q 024659           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGD------E  127 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~  127 (264)
                      +.|.+++.||.|+||.||++. ..++..||+|.+.....  .....+.+|++++++++|+||+++++++....      .
T Consensus        15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   94 (343)
T cd07880          15 DRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHD   94 (343)
T ss_pred             cceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccce
Confidence            457788899999999999998 45688999999865322  22346789999999999999999999986543      3


Q ss_pred             ceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      .++|++|+ +++|.+++.   ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++....
T Consensus        95 ~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~-gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~  169 (343)
T cd07880          95 FYLVMPFM-GTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAA-GIIHRDLKPGNLAVNEDCELKILDFGLARQTD  169 (343)
T ss_pred             EEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeecccccccc
Confidence            58999998 668988874   34689999999999999999999999 99999999999999999999999999987654


Q ss_pred             CC-CcccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          208 DG-RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       208 ~~-~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      .. ....++..|+|||++.+. .++.++|+||||++++++++|+.||...
T Consensus       170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~  219 (343)
T cd07880         170 SEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGH  219 (343)
T ss_pred             cCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            33 234567889999998763 4888999999999999999999999754

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=7.9e-34  Score=238.88  Aligned_cols=186  Identities=19%  Similarity=0.171  Sum_probs=157.1

Q ss_pred             CCCeEEEEE-eCCCCEEEEEEeCCC--CChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCCHHHhhh
Q 024659           69 APNVVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF  145 (264)
Q Consensus        69 ~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~  145 (264)
                      +++.||.+. ..+++.+|+|++...  .......+.+|+++++.++|+||+++++++...+..++++||+++++|.+++.
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~   91 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK   91 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence            445566665 336889999999764  33445678999999999999999999999999999999999999999999997


Q ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-----------Ccccc
Q 024659          146 HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----------RSYST  214 (264)
Q Consensus       146 ~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-----------~~~~~  214 (264)
                      ......+++..+..++.|++.||.|||++ +++|+||+|+||+++.++.++++|||.+......           ....+
T Consensus        92 ~~~~~~~~~~~~~~~~~~l~~~L~~LH~~-~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (314)
T cd08216          92 THFPEGLPELAIAFILKDVLNALDYIHSK-GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVK  170 (314)
T ss_pred             HhcccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccc
Confidence            54455688999999999999999999999 9999999999999999999999999987643211           22345


Q ss_pred             cccccccccccCC--CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          215 NLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       215 ~~~y~aPE~~~~~--~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      +..|+|||++...  .++.++|+||||++++||++|+.||...
T Consensus       171 ~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~  213 (314)
T cd08216         171 NLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDM  213 (314)
T ss_pred             cccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Confidence            6789999998764  4889999999999999999999999754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=7e-34  Score=240.77  Aligned_cols=189  Identities=15%  Similarity=0.153  Sum_probs=158.5

Q ss_pred             CCCCCCeEEEEEe-CCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCCHHH
Q 024659           66 GEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK  142 (264)
Q Consensus        66 g~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~  142 (264)
                      |.|+|++||++.+ ..++.||+|.+.....  ...+.+.+|+.+++.++|+||+++++++..++..++++||+.+++|.+
T Consensus         9 g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~   88 (328)
T cd08226           9 GFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANS   88 (328)
T ss_pred             cccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHH
Confidence            4449999999995 5789999999875432  234668889999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC-----------CCc
Q 024659          143 HLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-----------GRS  211 (264)
Q Consensus       143 ~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~-----------~~~  211 (264)
                      ++.......+++..+..++.|++.||.|||+. +++||||||+||+++.++.++++||+.+.....           ...
T Consensus        89 ~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (328)
T cd08226          89 LLKTYFPEGMSEALIGNILFGALRGLNYLHQN-GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQF  167 (328)
T ss_pred             HHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccccccccc
Confidence            98754445688999999999999999999999 999999999999999999999999975432111           011


Q ss_pred             ccccccccccccccCC--CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~--~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..++..|+|||++.+.  .++.++||||||++++||++|+.||...
T Consensus       168 ~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~  213 (328)
T cd08226         168 STSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDM  213 (328)
T ss_pred             ccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence            1235679999999764  4789999999999999999999999654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=1.4e-33  Score=230.05  Aligned_cols=195  Identities=19%  Similarity=0.193  Sum_probs=171.1

Q ss_pred             ccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeC--CcceEEEe
Q 024659           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLLVAE  133 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e  133 (264)
                      |.+.+.||+|++|.||++... ++..+++|.+.....  ...+.+.+|++.+++++|+||+++++.+...  ...++++|
T Consensus         2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   81 (260)
T cd06606           2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE   81 (260)
T ss_pred             ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence            445567899999999999965 688999999976543  3456788999999999999999999999887  78999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC---
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~---  210 (264)
                      |+++++|.+++..  ...+++..+..++.|++.+|.|||+. +++|+||+|+||+++.++.++|+|||.+.......   
T Consensus        82 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~-~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~  158 (260)
T cd06606          82 YVSGGSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHSN-GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGE  158 (260)
T ss_pred             ecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEcCCCCEEEcccccEEecccccccc
Confidence            9999999999864  23789999999999999999999999 99999999999999999999999999987654432   


Q ss_pred             ---cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 ---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 ---~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                         ...++..|+|||.+.+...+.++|+||||+++++|++|..||....
T Consensus       159 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~  207 (260)
T cd06606         159 GTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG  207 (260)
T ss_pred             cccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence               3456788999999988889999999999999999999999986543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-35  Score=242.50  Aligned_cols=201  Identities=20%  Similarity=0.254  Sum_probs=171.1

Q ss_pred             ccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      ++++.+..||.|+||.|.++. ....+.+|+|++++.-   ..+.+--+.|-++|.-. +-|.++.+..++++-+.+|+|
T Consensus       349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV  428 (683)
T KOG0696|consen  349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV  428 (683)
T ss_pred             cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence            346778888999999999998 4557899999998652   12233345566666655 468899999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC----
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR----  207 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~----  207 (264)
                      |||+.||+|--.+.  .-..+.++.+..++..|+.||-+||++ ||++||||.+||++|.+|.+||.|||+++..-    
T Consensus       429 MEyvnGGDLMyhiQ--Q~GkFKEp~AvFYAaEiaigLFFLh~k-gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~  505 (683)
T KOG0696|consen  429 MEYVNGGDLMYHIQ--QVGKFKEPVAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGV  505 (683)
T ss_pred             EEEecCchhhhHHH--HhcccCCchhhhhhHHHHHHhhhhhcC-CeeeeeccccceEeccCCceEeeecccccccccCCc
Confidence            99999999977664  345688889999999999999999999 99999999999999999999999999998532    


Q ss_pred             CCCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCccccc
Q 024659          208 DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSSFL  260 (264)
Q Consensus       208 ~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~~~~  260 (264)
                      ......||+.|+|||++..++|..++|+||+|++||||+.|++||.+++.+.+
T Consensus       506 TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~el  558 (683)
T KOG0696|consen  506 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL  558 (683)
T ss_pred             ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence            23456899999999999999999999999999999999999999998876644

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=6.8e-34  Score=241.71  Aligned_cols=193  Identities=23%  Similarity=0.328  Sum_probs=161.8

Q ss_pred             cccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCC--CChhHHHHHHHHHHHhcC-CCCCccccceeeEeC--CcceEE
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRS--AWPDARQFLEEARAVGQL-RNRRLANLLGCCCEG--DERLLV  131 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~--~~~~lv  131 (264)
                      .|++.+.||.|+||.||+|.+. ++..+|+|++...  .......+.+|+.+++++ +|+||+++++++...  ...++|
T Consensus         8 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv   87 (337)
T cd07852           8 KYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLV   87 (337)
T ss_pred             HHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEE
Confidence            4667778899999999999964 5789999988643  223345677899999999 999999999998653  357999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC-
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-  210 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-  210 (264)
                      +||+++ +|..++..   ..+++..+..++.|++.||.|||++ |++|+||+|+||+++.++.++|+|||++....... 
T Consensus        88 ~e~~~~-~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~-~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~  162 (337)
T cd07852          88 FEYMET-DLHAVIRA---NILEDVHKRYIMYQLLKALKYIHSG-NVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEE  162 (337)
T ss_pred             eccccc-CHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCcEEEeeccchhccccccc
Confidence            999975 89988853   2688889999999999999999999 99999999999999999999999999987543321 


Q ss_pred             --------cccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          211 --------SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       211 --------~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                              ...++..|+|||.+.+. .++.++|+||||+++|+|++|+.||...
T Consensus       163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~  216 (337)
T cd07852         163 NPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGT  216 (337)
T ss_pred             cccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCC
Confidence                    23467889999988654 4788999999999999999999998643

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-33  Score=233.42  Aligned_cols=195  Identities=21%  Similarity=0.221  Sum_probs=163.1

Q ss_pred             ccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCCh--hHHHHHHHHHHHhcC---CCCCccccceeeEeCCc-----
Q 024659           59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP--DARQFLEEARAVGQL---RNRRLANLLGCCCEGDE-----  127 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l---~h~~i~~~~~~~~~~~~-----  127 (264)
                      |++++.||.|+||.||++.+. +++.+|+|.+......  ....+.+|+.+++++   +|+|++++++++...+.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            456678899999999999965 4889999999754322  123456677766655   69999999999988766     


Q ss_pred             ceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      .++++||+.+ +|.+++.......+++..+..++.|++.||.+||+. +++|+||+|+||+++.++.++|+|||++....
T Consensus        81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~-~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~  158 (287)
T cd07838          81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH-RIVHRDLKPQNILVTSDGQVKIADFGLARIYS  158 (287)
T ss_pred             eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence            8999999975 798888653444689999999999999999999999 99999999999999999999999999987654


Q ss_pred             CCC---cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          208 DGR---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       208 ~~~---~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ...   ...++..|+|||++.+..++.++|+||||+++++|++|.+||...
T Consensus       159 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~  209 (287)
T cd07838         159 FEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGT  209 (287)
T ss_pred             CCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCC
Confidence            332   234577899999999888999999999999999999999888654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=5.6e-34  Score=242.71  Aligned_cols=194  Identities=18%  Similarity=0.255  Sum_probs=162.5

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeC----------
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG----------  125 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----------  125 (264)
                      ..|.+++.||.|+||.||++.. .+++.||+|.+........+.+.+|++++++++|+||+++++++...          
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS   84 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence            4577888899999999999995 56889999999776655567788999999999999999999876543          


Q ss_pred             ----CcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeC-CCCCeEEccc
Q 024659          126 ----DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCF  200 (264)
Q Consensus       126 ----~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~-~~~~~kl~df  200 (264)
                          ...++++||+. ++|.+++.   ...+++..+..++.||+.||.|||+. |++|+||||+||+++ +++.++++||
T Consensus        85 ~~~~~~~~lv~e~~~-~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~-givH~dikp~Nili~~~~~~~kl~df  159 (342)
T cd07854          85 LTELNSVYIVQEYME-TDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSA-NVLHRDLKPANVFINTEDLVLKIGDF  159 (342)
T ss_pred             ccccceEEEEeeccc-ccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEcCCCceEEECCc
Confidence                34689999997 48988874   34688999999999999999999999 999999999999998 4567999999


Q ss_pred             CCCcccCCC-------CcccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          201 GLMKNSRDG-------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       201 g~~~~~~~~-------~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      |++......       ....++..|+|||.+.. ..++.++|||||||++|+|++|+.||...
T Consensus       160 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~  222 (342)
T cd07854         160 GLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGA  222 (342)
T ss_pred             ccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            998754322       11245778999998754 45788999999999999999999999643

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=9.4e-34  Score=237.05  Aligned_cols=195  Identities=24%  Similarity=0.293  Sum_probs=162.9

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCC-------
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGD-------  126 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-------  126 (264)
                      +.|++.+.||.|+||.||+|.+. +++.||+|.++....  .....+.+|++++++++|||++++++++....       
T Consensus         7 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~   86 (302)
T cd07864           7 DKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKK   86 (302)
T ss_pred             hhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccc
Confidence            44667788899999999999964 588999999975432  22345778999999999999999999987654       


Q ss_pred             ---cceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCC
Q 024659          127 ---ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (264)
Q Consensus       127 ---~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~  203 (264)
                         ..++++||+++ ++...+.. ....+++..+..++.|++.||.|||+. +++|+||+|+||++++++.+||+|||++
T Consensus        87 ~~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~i~H~dl~p~nili~~~~~~kl~dfg~~  163 (302)
T cd07864          87 DKGAFYLVFEYMDH-DLMGLLES-GLVHFSEDHIKSFMKQLLEGLNYCHKK-NFLHRDIKCSNILLNNKGQIKLADFGLA  163 (302)
T ss_pred             cCCcEEEEEcccCc-cHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCcEEeCccccc
Confidence               68999999976 67777753 244689999999999999999999999 9999999999999999999999999998


Q ss_pred             cccCCCC-----cccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCC
Q 024659          204 KNSRDGR-----SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       204 ~~~~~~~-----~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      .......     ....+..|+|||.+.+. .++.++||||||+++++|++|++||..
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~  220 (302)
T cd07864         164 RLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQA  220 (302)
T ss_pred             ccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence            7654322     12346789999988654 478899999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=2e-35  Score=258.61  Aligned_cols=191  Identities=23%  Similarity=0.351  Sum_probs=166.6

Q ss_pred             ccccCCCCCCCeEEEEEeCC----CCEEEEEEeCCCCChh-HHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           61 IVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        61 ~l~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      +-+.||.|.||.|++|+++-    ...||+|.++....+. ..+|..|+.++-+++||||+++.|+........||+|||
T Consensus       633 Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyM  712 (996)
T KOG0196|consen  633 IEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYM  712 (996)
T ss_pred             EEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhh
Confidence            44457999999999999642    4689999999765443 456999999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc-ccc
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-YST  214 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~  214 (264)
                      ++|+|+.+|+. +...|+..+...|++.|+.|++||-+. ++|||||.+.|||++.+..+|++|||+++...+... ...
T Consensus       713 ENGsLDsFLR~-~DGqftviQLVgMLrGIAsGMkYLsdm-~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~yt  790 (996)
T KOG0196|consen  713 ENGSLDSFLRQ-NDGQFTVIQLVGMLRGIASGMKYLSDM-NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYT  790 (996)
T ss_pred             hCCcHHHHHhh-cCCceEeehHHHHHHHHHHHhHHHhhc-CchhhhhhhhheeeccceEEEeccccceeecccCCCcccc
Confidence            99999999987 445599999999999999999999999 999999999999999999999999999997654432 111


Q ss_pred             ------cccccccccccCCCCCCccceechHHHHHHHHh-CCCCCC
Q 024659          215 ------NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPP  253 (264)
Q Consensus       215 ------~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~  253 (264)
                            ..+|.|||.+...+++..+||||||+++||+++ |..|+.
T Consensus       791 t~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYW  836 (996)
T KOG0196|consen  791 TLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW  836 (996)
T ss_pred             ccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccc
Confidence                  378999999999999999999999999999765 556654

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=7.5e-35  Score=245.81  Aligned_cols=190  Identities=23%  Similarity=0.259  Sum_probs=165.8

Q ss_pred             cCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCCh--hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCCH
Q 024659           64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL  140 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL  140 (264)
                      .||.|.||+||-|+ ..+|+.||+|.+.+....  ....+++|+.+|+++.||.|+.+.-.|++.+..+.|||-+.|.=|
T Consensus       571 vLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GDML  650 (888)
T KOG4236|consen  571 VLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGDML  650 (888)
T ss_pred             hccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcchHH
Confidence            46999999999999 567999999999875322  235688999999999999999999999999999999999966544


Q ss_pred             HHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC---CCeEEcccCCCcccCCC---Ccccc
Q 024659          141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMKNSRDG---RSYST  214 (264)
Q Consensus       141 ~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~---~~~kl~dfg~~~~~~~~---~~~~~  214 (264)
                      +-++ ......+++..-..++.||+.||+|||.+ +|+|+||||+|||+...   -.+||+|||.|+.+...   ....|
T Consensus       651 EMIL-SsEkgRL~er~TkFlvtQIL~ALr~LH~k-nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVG  728 (888)
T KOG4236|consen  651 EMIL-SSEKGRLPERITKFLVTQILVALRYLHFK-NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVG  728 (888)
T ss_pred             HHHH-HhhcccchHHHHHHHHHHHHHHHHHhhhc-ceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcC
Confidence            4444 44667788888899999999999999999 99999999999999754   56999999999987653   45689


Q ss_pred             cccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       215 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      |+.|.|||++....|...-|+||+|+++|--++|-.||..+
T Consensus       729 TPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd  769 (888)
T KOG4236|consen  729 TPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED  769 (888)
T ss_pred             CccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc
Confidence            99999999999999999999999999999999999998643

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6.5e-36  Score=273.43  Aligned_cols=194  Identities=17%  Similarity=0.193  Sum_probs=167.9

Q ss_pred             ccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCC
Q 024659           61 IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN  137 (264)
Q Consensus        61 ~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  137 (264)
                      .-..||.|.||.||.+. .++|+..|+|.+.....  .....+.+|+.++..+.|||+++++|+-.+.+..+|.||||.+
T Consensus      1239 rg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~ 1318 (1509)
T KOG4645|consen 1239 RGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEG 1318 (1509)
T ss_pred             cccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhcc
Confidence            33457999999999999 67799999999875432  2234578899999999999999999999999999999999999


Q ss_pred             CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--------
Q 024659          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--------  209 (264)
Q Consensus       138 ~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--------  209 (264)
                      |+|.+.+.  .++..++.....+..|++.|+.|||+. |||||||||.||+++.+|.+|++|||.|......        
T Consensus      1319 GsLa~ll~--~gri~dE~vt~vyt~qll~gla~LH~~-gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el 1395 (1509)
T KOG4645|consen 1319 GSLASLLE--HGRIEDEMVTRVYTKQLLEGLAYLHEH-GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGEL 1395 (1509)
T ss_pred             CcHHHHHH--hcchhhhhHHHHHHHHHHHHHHHHHhc-CceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHH
Confidence            99999997  445577777788999999999999999 9999999999999999999999999999866543        


Q ss_pred             CcccccccccccccccCCC---CCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          210 RSYSTNLAFTPPEYLRTGR---VTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~~~---~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                      +...||+.|||||++.+..   ...++|||||||+++||+||+.|.+.-..
T Consensus      1396 ~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn 1446 (1509)
T KOG4645|consen 1396 QSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN 1446 (1509)
T ss_pred             HhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc
Confidence            2457899999999997654   56789999999999999999999875544

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=1.2e-33  Score=230.60  Aligned_cols=197  Identities=16%  Similarity=0.225  Sum_probs=170.7

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      |++++.||.|+||.||++.. .+++.+++|.+....  .....++.+|++++++++|+||+++.+++......++++||+
T Consensus         2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (256)
T cd08530           2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYA   81 (256)
T ss_pred             ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhc
Confidence            56778889999999999984 567899999987543  233456788999999999999999999999889999999999


Q ss_pred             CCCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--Cc
Q 024659          136 PNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RS  211 (264)
Q Consensus       136 ~~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--~~  211 (264)
                      ++++|.+++.+.  ....+++..+..++.|++.||.+||+. +++|+||+|+||++++++.++|+|||++......  ..
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~-~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~  160 (256)
T cd08530          82 PFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ-KILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKT  160 (256)
T ss_pred             CCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCcceEEEecCCcEEEeeccchhhhccCCccc
Confidence            999999988642  235688999999999999999999999 9999999999999999999999999998765443  22


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ..++..|++||.+.+..++.++|+||||+++++|++|+.||....
T Consensus       161 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~  205 (256)
T cd08530         161 QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARS  205 (256)
T ss_pred             ccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            356788999999998889999999999999999999999986543

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=1e-33  Score=240.43  Aligned_cols=195  Identities=20%  Similarity=0.197  Sum_probs=162.3

Q ss_pred             ccccc-ccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChh--------------HHHHHHHHHHHhcCCCCCcccccee
Q 024659           58 MENIV-SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD--------------ARQFLEEARAVGQLRNRRLANLLGC  121 (264)
Q Consensus        58 ~~~~l-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--------------~~~~~~e~~~l~~l~h~~i~~~~~~  121 (264)
                      .|..+ +.||.|+||.||++.+ .+++.||+|.+.......              ...+.+|++++++++|+||++++++
T Consensus         9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   88 (335)
T PTZ00024          9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV   88 (335)
T ss_pred             chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence            34444 4589999999999995 468899999987543221              1246789999999999999999999


Q ss_pred             eEeCCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccC
Q 024659          122 CCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG  201 (264)
Q Consensus       122 ~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg  201 (264)
                      +...+..++++||+. ++|.+++.  ....++...+..++.|++.||.+||+. +++|+||+|+||+++.++.++|+|||
T Consensus        89 ~~~~~~~~lv~e~~~-~~l~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~-~i~H~dl~~~nill~~~~~~kl~dfg  164 (335)
T PTZ00024         89 YVEGDFINLVMDIMA-SDLKKVVD--RKIRLTESQVKCILLQILNGLNVLHKW-YFMHRDLSPANIFINSKGICKIADFG  164 (335)
T ss_pred             EecCCcEEEEEeccc-cCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeecccccHHHeEECCCCCEEECCcc
Confidence            999999999999996 58999886  344688999999999999999999999 99999999999999999999999999


Q ss_pred             CCcccCCC------------------CcccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          202 LMKNSRDG------------------RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       202 ~~~~~~~~------------------~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ++......                  ....++..|+|||.+.+.. ++.++|+||||+++++|++|++||....
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~  238 (335)
T PTZ00024        165 LARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGEN  238 (335)
T ss_pred             ceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            98754310                  1123467899999987654 6889999999999999999999987543

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=1.2e-33  Score=237.13  Aligned_cols=197  Identities=19%  Similarity=0.266  Sum_probs=161.9

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh--hHHHHHHHHHHHhcCCCCCccccceeeEeCC------
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGD------  126 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------  126 (264)
                      .+.|.+++.||.|+||.||++.. .+++.+++|.+......  ....+.+|+++++.++|+||+++++++....      
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            45678888999999999999995 46889999998654322  2345678999999999999999999875433      


Q ss_pred             --cceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCc
Q 024659          127 --ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (264)
Q Consensus       127 --~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~  204 (264)
                        ..+++++|+.+ +|...+.. ....+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++.
T Consensus        87 ~~~~~lv~~~~~~-~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~  163 (311)
T cd07866          87 RGSVYMVTPYMDH-DLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHEN-HILHRDIKAANILIDNQGILKIADFGLAR  163 (311)
T ss_pred             CceEEEEEecCCc-CHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEECcCccch
Confidence              36899999865 57776643 345789999999999999999999999 99999999999999999999999999987


Q ss_pred             ccCCCC---------------cccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          205 NSRDGR---------------SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       205 ~~~~~~---------------~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ......               ...++..|+|||.+.+. .++.++||||||++++||++|++||...
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~  230 (311)
T cd07866         164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGK  230 (311)
T ss_pred             hccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCC
Confidence            543221               11346779999988654 4789999999999999999999998643

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2e-33  Score=239.35  Aligned_cols=194  Identities=18%  Similarity=0.256  Sum_probs=162.1

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCC------
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD------  126 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------  126 (264)
                      ...|.+++.||+|+||.||+|.. .+++.||+|.+....  ......+.+|++++++++|+||+++++++....      
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~   93 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ   93 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence            34577788889999999999995 568899999987532  122345788999999999999999999986543      


Q ss_pred             cceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCccc
Q 024659          127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (264)
Q Consensus       127 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~  206 (264)
                      ..++++||+.. +|..+.    ...+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++|+|||++...
T Consensus        94 ~~~lv~e~~~~-~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~-~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~  167 (342)
T cd07879          94 DFYLVMPYMQT-DLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSA-GIIHRDLKPGNLAVNEDCELKILDFGLARHA  167 (342)
T ss_pred             eEEEEeccccc-CHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEeeCCCCcCC
Confidence            35899999864 677654    23588999999999999999999999 9999999999999999999999999998764


Q ss_pred             CCC-CcccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          207 RDG-RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       207 ~~~-~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ... ....++..|+|||.+.+. .++.++|+||||++++||++|+.||...
T Consensus       168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~  218 (342)
T cd07879         168 DAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK  218 (342)
T ss_pred             CCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence            332 234567889999998764 5888999999999999999999999754

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-33  Score=233.12  Aligned_cols=193  Identities=23%  Similarity=0.313  Sum_probs=166.2

Q ss_pred             cccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           60 NIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        60 ~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      ++++.||+|.+|.||++... +++.+++|.+....  ....+.+.+|+.++++++|+|++++++++......++|+||++
T Consensus         2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   81 (282)
T cd07829           2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD   81 (282)
T ss_pred             eeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC
Confidence            45677899999999999954 58899999998753  2334567889999999999999999999999899999999997


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC----cc
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----SY  212 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~----~~  212 (264)
                      + +|.+++... ...+++..+..++.|++.||.+||+. +++|+||+|+||++++++.++|+|||.+.......    ..
T Consensus        82 ~-~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~  158 (282)
T cd07829          82 M-DLKKYLDKR-PGPLSPNLIKSIMYQLLRGLAYCHSH-RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHE  158 (282)
T ss_pred             c-CHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCcc
Confidence            4 899998642 24689999999999999999999999 99999999999999999999999999987654332    22


Q ss_pred             cccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          213 STNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       213 ~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..+..|+|||.+.+. .++.++|+||||++++||++|++||...
T Consensus       159 ~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~  202 (282)
T cd07829         159 VVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGD  202 (282)
T ss_pred             ccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCc
Confidence            346779999999776 6899999999999999999999888654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.6e-33  Score=227.94  Aligned_cols=189  Identities=23%  Similarity=0.259  Sum_probs=166.0

Q ss_pred             CCCCCCCeEEEEEeC-CCCEEEEEEeCCCCCh---hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCCH
Q 024659           65 HGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL  140 (264)
Q Consensus        65 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL  140 (264)
                      ||.|+||.||++... +++.+++|.+......   ....+.+|++++++++|+||+++++.+..++..+++|||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            589999999999964 5889999998765322   345788999999999999999999999999999999999999999


Q ss_pred             HHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----Ccccccc
Q 024659          141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTNL  216 (264)
Q Consensus       141 ~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~  216 (264)
                      .+++..  ...+++..+..++.|++.|+.+||+. +++|+||+|+||+++.++.++|+|||++......    ....++.
T Consensus        81 ~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lh~~-~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~  157 (250)
T cd05123          81 FSHLSK--EGRFSEERARFYAAEIVLALEYLHSL-GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTP  157 (250)
T ss_pred             HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCc
Confidence            999863  34689999999999999999999998 9999999999999999999999999998765432    2345678


Q ss_pred             cccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       217 ~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .|++||...+..++.++|+||||++++++++|+.||....
T Consensus       158 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~  197 (250)
T cd05123         158 EYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAED  197 (250)
T ss_pred             cccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence            8999999988889999999999999999999999996543

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=100.00  E-value=5.6e-36  Score=233.36  Aligned_cols=194  Identities=18%  Similarity=0.212  Sum_probs=163.4

Q ss_pred             cccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEEEecCC
Q 024659           60 NIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        60 ~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      +-+++||.|+||+|+|-. .+.|+..|||+++.... .+..++..|.+...+- ..|||++++|.+......||.||.+.
T Consensus        67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd  146 (361)
T KOG1006|consen   67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD  146 (361)
T ss_pred             HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh
Confidence            345678999999999999 56799999999987654 4567788888876666 68999999999999999999999995


Q ss_pred             CCCHHHhhh---cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---C
Q 024659          137 NDTLAKHLF---HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---R  210 (264)
Q Consensus       137 ~~sL~~~l~---~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---~  210 (264)
                      - ||+.+.+   ......+++.-+-.|..-+++||.||-....|+|||+||+|||++..|.+||+|||++......   .
T Consensus       147 ~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT  225 (361)
T KOG1006|consen  147 I-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKT  225 (361)
T ss_pred             h-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhh
Confidence            4 6765543   3345678898888999999999999988779999999999999999999999999998765443   2


Q ss_pred             cccccccccccccccC--CCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          211 SYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~--~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      ...|...|||||-+..  ..|+.++|+||||++|+|+.||+.|...
T Consensus       226 ~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~  271 (361)
T KOG1006|consen  226 VDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRK  271 (361)
T ss_pred             hccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcch
Confidence            3467788999999863  3489999999999999999999988754

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=3e-33  Score=236.88  Aligned_cols=193  Identities=19%  Similarity=0.281  Sum_probs=162.9

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEe-CCcceEEEe
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLLVAE  133 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e  133 (264)
                      .|.+++.||.|+||.||++.. .+++.+|+|++....  ....+.+.+|++++++++||||+++.+++.. ....++++|
T Consensus        11 ~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e   90 (328)
T cd07856          11 RYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTE   90 (328)
T ss_pred             ceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEee
Confidence            366778889999999999984 578899999886532  2234567889999999999999999999876 457889999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-Ccc
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY  212 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-~~~  212 (264)
                      |+ +++|.+++.   ...++...+..++.|++.||.|||++ +++|+||+|+||++++++.++|+|||++...... ...
T Consensus        91 ~~-~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~-~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~  165 (328)
T cd07856          91 LL-GTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSA-GVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGY  165 (328)
T ss_pred             hh-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEeECCCCCEEeCccccccccCCCcCCC
Confidence            98 558988874   34578888899999999999999999 9999999999999999999999999998754332 234


Q ss_pred             cccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          213 STNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       213 ~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      .++..|+|||.+.+ ..++.++|+||||+++++|++|++||+..
T Consensus       166 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~  209 (328)
T cd07856         166 VSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGK  209 (328)
T ss_pred             cccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            56788999998866 45899999999999999999999999654

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3e-34  Score=239.12  Aligned_cols=189  Identities=21%  Similarity=0.322  Sum_probs=158.1

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhc--CCCCCccccceeeEeCC----cceE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQ--LRNRRLANLLGCCCEGD----ERLL  130 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~~i~~~~~~~~~~~----~~~l  130 (264)
                      ...++++.+|+|.||.||+|.+.+ +.||||+++...   .+.+.+|-++..-  ++|+||+++++.-....    .++|
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~~-~~VAVKifp~~~---kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL  285 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLDN-RLVAVKIFPEQE---KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL  285 (534)
T ss_pred             CchhhHHHhhcCccceeehhhccC-ceeEEEecCHHH---HHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence            345677788999999999999876 599999998643   4556666666554  58999999999876655    7899


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC--------CCceeeccCCCCeeeCCCCCeEEcccCC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK--------ERALYHDLNAYRIVFDDDVNPRLSCFGL  202 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~--------~~i~H~dl~~~Nil~~~~~~~kl~dfg~  202 (264)
                      |++|.+.|+|.++|.   ...++|....+|+..+++||+|||+.        ..|+|||||+.||||.++++..|+|||+
T Consensus       286 Vt~fh~kGsL~dyL~---~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL  362 (534)
T KOG3653|consen  286 VTEFHPKGSLCDYLK---ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL  362 (534)
T ss_pred             EeeeccCCcHHHHHH---hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence            999999999999994   45699999999999999999999974        3599999999999999999999999999


Q ss_pred             CcccCCC------CcccccccccccccccCCC-CC-----CccceechHHHHHHHHhCCCCC
Q 024659          203 MKNSRDG------RSYSTNLAFTPPEYLRTGR-VT-----PESVMYSFGTLLLDLLSGKHIP  252 (264)
Q Consensus       203 ~~~~~~~------~~~~~~~~y~aPE~~~~~~-~~-----~~~DiwslG~~l~el~~g~~~~  252 (264)
                      |......      ....||.+|||||++.+.. +.     .+.||||+|.+||||+++=.-+
T Consensus       363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~  424 (534)
T KOG3653|consen  363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDA  424 (534)
T ss_pred             eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence            9866533      2357899999999998764 33     3699999999999999875433

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=2.2e-33  Score=233.35  Aligned_cols=193  Identities=20%  Similarity=0.243  Sum_probs=164.6

Q ss_pred             ccccccCCCCCCCeEEEEEe----CCCCEEEEEEeCCCC----ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcce
Q 024659           59 ENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSA----WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~  129 (264)
                      |++.+.||.|++|.||++..    .++..+|+|.+....    ....+.+.+|++++.++ +|+||+++.+.+......+
T Consensus         2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~   81 (288)
T cd05583           2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH   81 (288)
T ss_pred             ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence            56778889999999999884    246789999987532    12235578899999999 5999999999998888999


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~  209 (264)
                      +|+||+++++|.+++..  ...+++..+..++.|++.+|.+||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus        82 lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~-~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  158 (288)
T cd05583          82 LILDYVNGGELFTHLYQ--REHFTESEVRVYIAEIVLALDHLHQL-GIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE  158 (288)
T ss_pred             EEEecCCCCcHHHHHhh--cCCcCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence            99999999999998853  35688899999999999999999999 9999999999999999999999999998754332


Q ss_pred             C-----cccccccccccccccCCC--CCCccceechHHHHHHHHhCCCCCCC
Q 024659          210 R-----SYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       210 ~-----~~~~~~~y~aPE~~~~~~--~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      .     ...++..|+|||.+.+..  .+.++|+||||+++++|++|..||..
T Consensus       159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~  210 (288)
T cd05583         159 EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTV  210 (288)
T ss_pred             cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCccc
Confidence            2     234678999999987665  78899999999999999999999853

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=3.5e-33  Score=233.17  Aligned_cols=198  Identities=20%  Similarity=0.278  Sum_probs=163.6

Q ss_pred             CCccccccccCCCCCCCeEEEEEeCC-CCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCC-CCCccccceeeEeCCcceEE
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKLEN-QFRIAVKRFNRSAW-PDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv  131 (264)
                      .++.+.+++.||+|++|.||++.+.+ ++.+|+|.+..... .....+..|+..+.+.. |+||+++++++......+++
T Consensus        13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v   92 (296)
T cd06618          13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC   92 (296)
T ss_pred             CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence            34567888899999999999999764 88999999976432 23345666777666664 99999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC-
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-  210 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-  210 (264)
                      +||+.+ +|.+++.. ....+++..+..++.|++.|+.|||+..+++|+||+|+||++++++.++|+|||++....... 
T Consensus        93 ~e~~~~-~l~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~  170 (296)
T cd06618          93 MELMST-CLDKLLKR-IQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA  170 (296)
T ss_pred             eeccCc-CHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc
Confidence            999854 67777654 334788999999999999999999973399999999999999999999999999987544322 


Q ss_pred             --cccccccccccccccCCC----CCCccceechHHHHHHHHhCCCCCCC
Q 024659          211 --SYSTNLAFTPPEYLRTGR----VTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       211 --~~~~~~~y~aPE~~~~~~----~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                        ...++..|+|||++.+..    ++.++|+||||+++|+|++|+.||..
T Consensus       171 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~  220 (296)
T cd06618         171 KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKN  220 (296)
T ss_pred             ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCc
Confidence              234567899999987553    78899999999999999999999865

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-34  Score=245.01  Aligned_cols=202  Identities=15%  Similarity=0.176  Sum_probs=172.9

Q ss_pred             HHHhCCCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChh-----HH---HHHHHHHHHhcCC---CCCccc
Q 024659           50 RTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD-----AR---QFLEEARAVGQLR---NRRLAN  117 (264)
Q Consensus        50 ~~~~~~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~---~~~~e~~~l~~l~---h~~i~~  117 (264)
                      +....+|++|..++.+|.|+||.|+.+.+ .+...|++|.+.++..-.     .+   .+-.|+++|..++   |+||++
T Consensus       554 e~~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlK  633 (772)
T KOG1152|consen  554 EKEYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILK  633 (772)
T ss_pred             eeeecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhh
Confidence            34456789999999999999999999995 456788999997653211     11   1346899999986   999999


Q ss_pred             cceeeEeCCcceEEEecC-CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeE
Q 024659          118 LLGCCCEGDERLLVAEYM-PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPR  196 (264)
Q Consensus       118 ~~~~~~~~~~~~lv~e~~-~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~k  196 (264)
                      ++++|++++.++|++|.- ++-+|.+++.  -...+++..+..|.+|++.|+++||+. ||+|||||-+|+.++.+|-+|
T Consensus       634 lLdfFEddd~yyl~te~hg~gIDLFd~IE--~kp~m~E~eAk~IFkQV~agi~hlh~~-~ivhrdikdenvivd~~g~~k  710 (772)
T KOG1152|consen  634 LLDFFEDDDYYYLETEVHGEGIDLFDFIE--FKPRMDEPEAKLIFKQVVAGIKHLHDQ-GIVHRDIKDENVIVDSNGFVK  710 (772)
T ss_pred             hhheeecCCeeEEEecCCCCCcchhhhhh--ccCccchHHHHHHHHHHHhcccccccc-CceecccccccEEEecCCeEE
Confidence            999999999999999965 4568889986  455789999999999999999999999 999999999999999999999


Q ss_pred             EcccCCCcccCCC--CcccccccccccccccCCCC-CCccceechHHHHHHHHhCCCCCCC
Q 024659          197 LSCFGLMKNSRDG--RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       197 l~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~~~-~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      |+|||.+...+.+  ..+.||..|+|||++.+.+| ....|||++|++||.++....|+++
T Consensus       711 lidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  711 LIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             EeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence            9999998765544  56799999999999999887 4579999999999999999999864

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=100.00  E-value=1.1e-34  Score=221.88  Aligned_cols=208  Identities=19%  Similarity=0.244  Sum_probs=179.5

Q ss_pred             cccCHHHHHHHhCCCccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC-CCCccccc
Q 024659           42 CEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLL  119 (264)
Q Consensus        42 ~~~~~~~~~~~~~~~~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~  119 (264)
                      .-|+.+.......+-++|++++++|.|-++.||.|. ..+.+.+++|.+++..   ...+.+|+.+|..|. ||||++++
T Consensus        23 eYWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~   99 (338)
T KOG0668|consen   23 EYWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLL   99 (338)
T ss_pred             hhcchhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehh
Confidence            356666666677788899999999999999999999 6778899999998644   456889999999998 99999999


Q ss_pred             eeeEeCC--cceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC-CCCeE
Q 024659          120 GCCCEGD--ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPR  196 (264)
Q Consensus       120 ~~~~~~~--~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~-~~~~k  196 (264)
                      ++..++.  ...+|+||+.+.++..+.     +.++...+..++.++++||.|+|+. ||+|||+||.|++||. ...++
T Consensus       100 DiV~Dp~SktpaLiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~-GImHRDVKPhNvmIdh~~rkLr  173 (338)
T KOG0668|consen  100 DIVKDPESKTPSLIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSM-GIMHRDVKPHNVMIDHELRKLR  173 (338)
T ss_pred             hhhcCccccCchhHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhc-CcccccCCcceeeechhhceee
Confidence            9997754  578999999888777655     2477788999999999999999999 9999999999999995 47899


Q ss_pred             EcccCCCcccCCCCccc---ccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCCccc
Q 024659          197 LSCFGLMKNSRDGRSYS---TNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHVSS  258 (264)
Q Consensus       197 l~dfg~~~~~~~~~~~~---~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~~~~  258 (264)
                      |+|+|+|.+..++..++   .+..|..||.+.+-. |+.+-|+|||||+|..|+..+.||....++
T Consensus       174 lIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN  239 (338)
T KOG0668|consen  174 LIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN  239 (338)
T ss_pred             eeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCC
Confidence            99999999988887664   467789999997655 899999999999999999999999865554

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=5.9e-33  Score=235.49  Aligned_cols=193  Identities=20%  Similarity=0.268  Sum_probs=159.7

Q ss_pred             ccccccCCCCCCCeEEEEEeC-C--CCEEEEEEeCCCC--ChhHHHHHHHHHHHhcC-CCCCccccceeeEeC----Ccc
Q 024659           59 ENIVSEHGEKAPNVVYKGKLE-N--QFRIAVKRFNRSA--WPDARQFLEEARAVGQL-RNRRLANLLGCCCEG----DER  128 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~-~--~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~----~~~  128 (264)
                      |++.+.||+|+||.||++... .  +..+|+|++....  ....+.+.+|+++++++ .|+||+++++.+...    ...
T Consensus         2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~   81 (332)
T cd07857           2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL   81 (332)
T ss_pred             ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence            567778899999999999953 4  7899999987532  22245678899999999 599999999875432    346


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      +++++|+. ++|.+.+.  ....+++..+..++.||+.||.|||++ |++|+||||+||+++.++.++|+|||++.....
T Consensus        82 ~~~~e~~~-~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~-givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~  157 (332)
T cd07857          82 YLYEELME-ADLHQIIR--SGQPLTDAHFQSFIYQILCGLKYIHSA-NVLHRDLKPGNLLVNADCELKICDFGLARGFSE  157 (332)
T ss_pred             EEEEeccc-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHeEEcCCCCEEeCcCCCceeccc
Confidence            78888885 58998885  345789999999999999999999999 999999999999999999999999999875432


Q ss_pred             C--------CcccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          209 G--------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       209 ~--------~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      .        ....++..|+|||.+.+ ..++.++|+||||+++++|++|++||...
T Consensus       158 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~  213 (332)
T cd07857         158 NPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGK  213 (332)
T ss_pred             ccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCC
Confidence            1        12356788999998865 45899999999999999999999998653

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.7e-33  Score=238.57  Aligned_cols=195  Identities=20%  Similarity=0.273  Sum_probs=165.4

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCc-----
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE-----  127 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-----  127 (264)
                      .+.|.+++.||.|++|.||++.. .++..||+|.+....  ......+.+|+.++++++|+|++++.+++...+.     
T Consensus        14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   93 (343)
T cd07851          14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ   93 (343)
T ss_pred             cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence            34577888999999999999996 457899999987532  2234567789999999999999999998865544     


Q ss_pred             -ceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCccc
Q 024659          128 -RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (264)
Q Consensus       128 -~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~  206 (264)
                       .++|+||+ +++|.+++.   ...+++..+..++.|++.||.+||+. |++|+||+|+||+++.++.++|+|||++...
T Consensus        94 ~~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~~~~ql~~aL~~LH~~-gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~  168 (343)
T cd07851          94 DVYLVTHLM-GADLNNIVK---CQKLSDDHIQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNEDCELKILDFGLARHT  168 (343)
T ss_pred             cEEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCCEEEccccccccc
Confidence             89999998 568999885   34689999999999999999999999 9999999999999999999999999998765


Q ss_pred             CCC-CcccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          207 RDG-RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       207 ~~~-~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ... ....++..|+|||.+.+. .++.++||||||+++++|++|+.||...
T Consensus       169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~  219 (343)
T cd07851         169 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGS  219 (343)
T ss_pred             cccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence            432 334567889999998654 5788999999999999999999998644

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6.1e-34  Score=246.87  Aligned_cols=190  Identities=23%  Similarity=0.353  Sum_probs=165.7

Q ss_pred             ccccCCCCCCCeEEEEEeCC----CCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           61 IVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        61 ~l~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      +.++||+|.||+|++|.|..    ...||||++...... ...+|.+|+.++.+|+|+|++++||+..+ ....+|+|.+
T Consensus       114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa  192 (1039)
T KOG0199|consen  114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA  192 (1039)
T ss_pred             HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence            45567999999999999753    356799999876544 56789999999999999999999999987 5678999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCcc---
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY---  212 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~~---  212 (264)
                      +.|||.+.|++.....+.....-.++.||+.|+.||..+ ++|||||...|+++.....+||+|||+.+-.......   
T Consensus       193 plGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk-rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm  271 (1039)
T KOG0199|consen  193 PLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK-RLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVM  271 (1039)
T ss_pred             ccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh-hhhhhhhhhhhheecccceeeeecccceeccCCCCcceEe
Confidence            999999999875566777888899999999999999999 9999999999999999999999999999876554332   


Q ss_pred             ----cccccccccccccCCCCCCccceechHHHHHHHHhCCCCC
Q 024659          213 ----STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP  252 (264)
Q Consensus       213 ----~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~  252 (264)
                          .....|.|||.+...+++.++|+|+|||++|||+++..-+
T Consensus       272 ~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEeP  315 (1039)
T KOG0199|consen  272 APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEP  315 (1039)
T ss_pred             cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCC
Confidence                2347799999999999999999999999999999986543

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=5.9e-33  Score=265.29  Aligned_cols=182  Identities=26%  Similarity=0.416  Sum_probs=156.5

Q ss_pred             cccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCCH
Q 024659           62 VSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL  140 (264)
Q Consensus        62 l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL  140 (264)
                      ...||+|+||.||+|.. .++..||+|++......    ...|++.+++++||||+++++++.+.+..++||||+++++|
T Consensus       695 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L  770 (968)
T PLN00113        695 ENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNL  770 (968)
T ss_pred             ccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcH
Confidence            34569999999999995 67889999998754322    22468889999999999999999999999999999999999


Q ss_pred             HHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHh---cCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCccccccc
Q 024659          141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCT---SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA  217 (264)
Q Consensus       141 ~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh---~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  217 (264)
                      .+++.     .++|..+..++.|++.|++|||   +. +++||||||+||+++.++..++. ++............++..
T Consensus       771 ~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~-~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~t~~  843 (968)
T PLN00113        771 SEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSP-AVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISSA  843 (968)
T ss_pred             HHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCC-CeecCCCCHHhEEECCCCceEEE-eccccccccCCCcccccc
Confidence            99985     3889999999999999999999   66 89999999999999988887775 665544333344467899


Q ss_pred             ccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       218 y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      |+|||++.+..++.++|||||||++|||++|+.||..
T Consensus       844 y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~  880 (968)
T PLN00113        844 YVAPETRETKDITEKSDIYGFGLILIELLTGKSPADA  880 (968)
T ss_pred             ccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCc
Confidence            9999999988899999999999999999999999853

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=100.00  E-value=4.5e-33  Score=225.29  Aligned_cols=180  Identities=19%  Similarity=0.207  Sum_probs=153.5

Q ss_pred             CCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCCHHHhhhc
Q 024659           68 KAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFH  146 (264)
Q Consensus        68 G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~  146 (264)
                      |.++.||++.+ .+++.+|+|.+....     ...+|...+....||||+++++++.+.+..+++|||+++++|.+++..
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            88999999995 568899999997643     123445555566799999999999999999999999999999998863


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-Cccccccccccccccc
Q 024659          147 WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLR  225 (264)
Q Consensus       147 ~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~  225 (264)
                        ...+++..+..++.|++.||.|||++ +++|+||||+||+++.++.++++|||.+...... ....++..|+|||...
T Consensus        79 --~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~  155 (237)
T cd05576          79 --FLNIPEECVKRWAAEMVVALDALHRE-GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGG  155 (237)
T ss_pred             --hcCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccC
Confidence              34689999999999999999999999 9999999999999999999999999987654332 2334567799999998


Q ss_pred             CCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          226 TGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       226 ~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      +..+++++|+||+|++++||++|..|+...
T Consensus       156 ~~~~~~~~DvwslG~il~el~~g~~~~~~~  185 (237)
T cd05576         156 ISEETEACDWWSLGAILFELLTGKTLVECH  185 (237)
T ss_pred             CCCCCchhhHHHHHHHHHHHHHCcchhhcC
Confidence            888999999999999999999999876544

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2e-35  Score=228.87  Aligned_cols=199  Identities=18%  Similarity=0.262  Sum_probs=166.2

Q ss_pred             ccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeC--------
Q 024659           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG--------  125 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------  125 (264)
                      +.|+.+.++|+|.||.||+++ .+.++.||+|++-.++.  .-.....+|+.+|..++|+|++.++.+|...        
T Consensus        17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r   96 (376)
T KOG0669|consen   17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR   96 (376)
T ss_pred             hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence            346677889999999999999 56688899887754321  2245678899999999999999999998542        


Q ss_pred             CcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcc
Q 024659          126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (264)
Q Consensus       126 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~  205 (264)
                      ..+++||.+|++ +|.-++.+ ....++..++..++.++..||.|+|+. .|+|||+|+.|+||+.+|.+||+|||+++.
T Consensus        97 ~t~ylVf~~ceh-DLaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iHr~-kilHRDmKaaNvLIt~dgilklADFGlar~  173 (376)
T KOG0669|consen   97 ATFYLVFDFCEH-DLAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIHRN-KILHRDMKAANVLITKDGILKLADFGLARA  173 (376)
T ss_pred             ceeeeeHHHhhh-hHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHh-hHHhhcccHhhEEEcCCceEEeeccccccc
Confidence            247999999988 58888854 445788999999999999999999999 999999999999999999999999999964


Q ss_pred             cCCCC--------cccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCCccc
Q 024659          206 SRDGR--------SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHVSS  258 (264)
Q Consensus       206 ~~~~~--------~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~~~~  258 (264)
                      .....        ....|..|++||.+.+.. ++++.|||+-||++.||++|.+++..+...
T Consensus       174 fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteq  235 (376)
T KOG0669|consen  174 FSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQ  235 (376)
T ss_pred             eecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHH
Confidence            43221        224489999999998765 999999999999999999999999876543

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=4.8e-33  Score=238.80  Aligned_cols=191  Identities=25%  Similarity=0.374  Sum_probs=165.8

Q ss_pred             ccccCCCCCCCeEEEEEeCC-----CCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           61 IVSEHGEKAPNVVYKGKLEN-----QFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        61 ~l~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      +-..||.|-||.||+|...+     .-.||+|..+... ..+.+.|..|+.++++++||||++++|+|.+ ...|||||.
T Consensus       393 l~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmEL  471 (974)
T KOG4257|consen  393 LKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVMEL  471 (974)
T ss_pred             HHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEec
Confidence            33467999999999998543     3457889988754 4456789999999999999999999999964 578999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCcccc
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST  214 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~  214 (264)
                      ++.|.|+.++.. +...++..+...++.||+.||.|||++ ++|||||..+|||+.....+||+|||+++...+...+..
T Consensus       472 ~~~GELr~yLq~-nk~sL~l~tL~ly~~Qi~talaYLeSk-rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYka  549 (974)
T KOG4257|consen  472 APLGELREYLQQ-NKDSLPLRTLTLYCYQICTALAYLESK-RFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKA  549 (974)
T ss_pred             ccchhHHHHHHh-ccccchHHHHHHHHHHHHHHHHHHHhh-chhhhhhhhhheeecCcceeeecccchhhhccccchhhc
Confidence            999999999975 456788889999999999999999999 999999999999999999999999999998776654433


Q ss_pred             -----cccccccccccCCCCCCccceechHHHHHHHH-hCCCCCCC
Q 024659          215 -----NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLL-SGKHIPPS  254 (264)
Q Consensus       215 -----~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~-~g~~~~~~  254 (264)
                           ...|||||.+.-..++..+|||-||+++||++ .|..||..
T Consensus       550 S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqg  595 (974)
T KOG4257|consen  550 SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQG  595 (974)
T ss_pred             cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccc
Confidence                 46799999999899999999999999999985 57788864

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.1e-33  Score=246.29  Aligned_cols=205  Identities=16%  Similarity=0.260  Sum_probs=176.2

Q ss_pred             cccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcC-CCCCccccceeeEe-----CCcceE
Q 024659           58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCE-----GDERLL  130 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-----~~~~~l  130 (264)
                      .++++..||.|.+|.||+++ .++++..|+|+...... ..+++..|.++|+.+ .|||++.+++++.-     ++.+||
T Consensus        20 ~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWL   98 (953)
T KOG0587|consen   20 IFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWL   98 (953)
T ss_pred             ccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEE
Confidence            35566677999999999999 77788999999887653 346678899999998 59999999999864     567999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-  209 (264)
                      |||||.+||..|+++...+..+.|..+..|++.++.|+.+||.+ .++|||||-.|||++.++.+||.|||++...... 
T Consensus        99 VMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n-kviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~  177 (953)
T KOG0587|consen   99 VMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN-KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTV  177 (953)
T ss_pred             EeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc-ceeeecccCceEEEeccCcEEEeeeeeeeeeeccc
Confidence            99999999999999887788899999999999999999999999 9999999999999999999999999998765443 


Q ss_pred             ---CcccccccccccccccCC-----CCCCccceechHHHHHHHHhCCCCCC-CCccccceecC
Q 024659          210 ---RSYSTNLAFTPPEYLRTG-----RVTPESVMYSFGTLLLDLLSGKHIPP-SHVSSFLWLVP  264 (264)
Q Consensus       210 ---~~~~~~~~y~aPE~~~~~-----~~~~~~DiwslG~~l~el~~g~~~~~-~~~~~~~~~~p  264 (264)
                         ....||+.|||||++.-.     .|+..+|+||||++..||--|.+|+. -+....++.+|
T Consensus       178 grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~Ip  241 (953)
T KOG0587|consen  178 GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP  241 (953)
T ss_pred             ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCC
Confidence               455789999999999532     37889999999999999999999987 45555555554

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.5e-33  Score=240.66  Aligned_cols=197  Identities=19%  Similarity=0.226  Sum_probs=166.4

Q ss_pred             CCCccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEE
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      ..+..|++..++|.|+|+.|-.+. ..+++..++|++.....    ...+|+.++... +|+||+++.+++.++.+.++|
T Consensus       319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v  394 (612)
T KOG0603|consen  319 PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLV  394 (612)
T ss_pred             CcchhhccccccCCCCccceeeeeccccccchhheecccccc----ccccccchhhhhcCCCcceeecceecCCceeeee
Confidence            346778888899999999999888 55678899999987632    233567665555 699999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeee-CCCCCeEEcccCCCcccCCCC
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF-DDDVNPRLSCFGLMKNSRDGR  210 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~-~~~~~~kl~dfg~~~~~~~~~  210 (264)
                      ||.+.++-+.+.+..  . +.....+..|+.+|+.++.|||++ |++||||||+|||+ ++.+.++|+|||.++......
T Consensus       395 ~e~l~g~ell~ri~~--~-~~~~~e~~~w~~~lv~Av~~LH~~-gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~  470 (612)
T KOG0603|consen  395 MELLDGGELLRRIRS--K-PEFCSEASQWAAELVSAVDYLHEQ-GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSC  470 (612)
T ss_pred             ehhccccHHHHHHHh--c-chhHHHHHHHHHHHHHHHHHHHhc-CeeecCCChhheeecCCCCcEEEEEechhhhCchhh
Confidence            999999888777752  2 222267778999999999999999 99999999999999 588999999999998766552


Q ss_pred             -cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCccc
Q 024659          211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS  258 (264)
Q Consensus       211 -~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~~  258 (264)
                       ...-|..|.|||++....+++.+|+||||++||+|++|+.||.++...
T Consensus       471 ~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~  519 (612)
T KOG0603|consen  471 DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG  519 (612)
T ss_pred             cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch
Confidence             335578899999999889999999999999999999999999887765

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=1.8e-32  Score=224.44  Aligned_cols=195  Identities=16%  Similarity=0.203  Sum_probs=161.1

Q ss_pred             ccccccCCCCCCCeEEEEEeCC-CCEEEEEEeCC---C--CChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           59 ENIVSEHGEKAPNVVYKGKLEN-QFRIAVKRFNR---S--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~---~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      |.+.+.||.|+||.||++.+.. +..+++|.++.   .  .......+..|+.++++++||||+++++.+.+....++++
T Consensus         2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (260)
T cd08222           2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIIT   81 (260)
T ss_pred             ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEE
Confidence            5677889999999999998543 34455555442   1  1223345677899999999999999999999888999999


Q ss_pred             ecCCCCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-
Q 024659          133 EYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       133 e~~~~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-  209 (264)
                      ||+++++|.+++...  ....+++..++.++.|++.|+.|||+. +++|+||+|+||++++ +.++|+|||.+...... 
T Consensus        82 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~  159 (260)
T cd08222          82 EYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR-RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC  159 (260)
T ss_pred             EeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc-CccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence            999999999887532  345789999999999999999999999 9999999999999975 56999999988754332 


Q ss_pred             ---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 ---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                         ....++..|+|||.+.+..++.++|+||||+++++|++|..||...
T Consensus       160 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~  208 (260)
T cd08222         160 DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ  208 (260)
T ss_pred             ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence               2335678899999998888999999999999999999999998643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-33  Score=233.07  Aligned_cols=199  Identities=22%  Similarity=0.264  Sum_probs=167.9

Q ss_pred             ccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCC-CChh------HHHHHHHHHHHhcCCCCCccccceeeEeC-Cc
Q 024659           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS-AWPD------ARQFLEEARAVGQLRNRRLANLLGCCCEG-DE  127 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~-~~~~------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~  127 (264)
                      +.|-++..||.|+|+.||++. +..+++||+|+-... +|.+      .+...+|.++.+.|+||.||++|+++.-+ +.
T Consensus       463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds  542 (775)
T KOG1151|consen  463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS  542 (775)
T ss_pred             HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence            456788899999999999999 667889999987643 2222      23467899999999999999999999654 56


Q ss_pred             ceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCceeeccCCCCeeeCC---CCCeEEcccCCC
Q 024659          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-ERALYHDLNAYRIVFDD---DVNPRLSCFGLM  203 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~-~~i~H~dl~~~Nil~~~---~~~~kl~dfg~~  203 (264)
                      +|-|.|||+|.+|+-+|+  ..+.+++..++.|+.||+.||.||.+. ..|+|-||||.|||+.+   .|.+||.|||++
T Consensus       543 FCTVLEYceGNDLDFYLK--QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLS  620 (775)
T KOG1151|consen  543 FCTVLEYCEGNDLDFYLK--QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLS  620 (775)
T ss_pred             ceeeeeecCCCchhHHHH--hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchh
Confidence            788999999999999997  566789999999999999999999876 47999999999999954   488999999999


Q ss_pred             cccCCCC-----------cccccccccccccccCC----CCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          204 KNSRDGR-----------SYSTNLAFTPPEYLRTG----RVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       204 ~~~~~~~-----------~~~~~~~y~aPE~~~~~----~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                      +.+....           ...||.+|.+||.+.-+    +.+.++||||+||++|.++.|+.||-.+.+
T Consensus       621 KIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs  689 (775)
T KOG1151|consen  621 KIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS  689 (775)
T ss_pred             hhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh
Confidence            8765432           23678999999988543    378899999999999999999999986654

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=2.7e-32  Score=249.91  Aligned_cols=146  Identities=21%  Similarity=0.220  Sum_probs=129.8

Q ss_pred             CccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCC---hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      +..|.++++||.|+||.||++.+. .++.||+|++.....   .....+..|+.++..++|+||+++++++...+..++|
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV   82 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV   82 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence            456888999999999999999965 688999999975432   2235688899999999999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCc
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~  204 (264)
                      |||+.+++|.+++..  ...+++..++.++.||+.||.|||.. +|+||||||+|||++.++.++|+|||+++
T Consensus        83 mEy~~g~~L~~li~~--~~~l~~~~~~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          83 MEYLIGGDVKSLLHI--YGYFDEEMAVKYISEVALALDYLHRH-GIIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             EeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            999999999999863  34688899999999999999999999 99999999999999999999999999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-34  Score=224.56  Aligned_cols=188  Identities=19%  Similarity=0.268  Sum_probs=160.8

Q ss_pred             ccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCC-----cceEEEec
Q 024659           63 SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ERLLVAEY  134 (264)
Q Consensus        63 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~  134 (264)
                      +.||.|+||+||.+.+ .+|+.|++|++....  -...+++.+|+.+|..++|.|++..+++.+-.+     .+|.++|.
T Consensus        59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TEL  138 (449)
T KOG0664|consen   59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTEL  138 (449)
T ss_pred             CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHH
Confidence            4569999999999995 569999999987542  233567899999999999999999999876543     25678888


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCcc--
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--  212 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~~--  212 (264)
                      +.. +|...+-  ..+.++...+.-++.||++||+|||+. +|+||||||.|.+++.+..+||+|||+++........  
T Consensus       139 mQS-DLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA-~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hM  214 (449)
T KOG0664|consen  139 MQS-DLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTA-NILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNM  214 (449)
T ss_pred             HHh-hhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhc-chhhccCCCccEEeccCceEEecccccccccchhhhhhh
Confidence            855 5888775  567899999999999999999999999 9999999999999999999999999999976655443  


Q ss_pred             ---cccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCC
Q 024659          213 ---STNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       213 ---~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                         ..|..|+|||.+.+.. |+...||||+||++.|++.++.+|..
T Consensus       215 TqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQA  260 (449)
T KOG0664|consen  215 THEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQA  260 (449)
T ss_pred             HHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhc
Confidence               3468899999999876 99999999999999999999988864

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=8.2e-33  Score=252.00  Aligned_cols=190  Identities=19%  Similarity=0.203  Sum_probs=152.8

Q ss_pred             ccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeC---------
Q 024659           57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEG---------  125 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---------  125 (264)
                      .+++.++.||+|+||.||+++ .-||..+|+|+++... ......+.+|+..|.+|.||||++++..|.+.         
T Consensus       479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei  558 (1351)
T KOG1035|consen  479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEI  558 (1351)
T ss_pred             hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccc
Confidence            445566667999999999999 6789999999998764 22345688999999999999999987644110         


Q ss_pred             --------------------------------------------------------------------------------
Q 024659          126 --------------------------------------------------------------------------------  125 (264)
Q Consensus       126 --------------------------------------------------------------------------------  125 (264)
                                                                                                      
T Consensus       559 ~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~  638 (1351)
T KOG1035|consen  559 VASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEG  638 (1351)
T ss_pred             cccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCC
Confidence                                                                                            


Q ss_pred             ------------------------------CcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 024659          126 ------------------------------DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE  175 (264)
Q Consensus       126 ------------------------------~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~  175 (264)
                                                    ..+||-||||+..+++++++++.. .-.....++++++|+.||.|+|++ 
T Consensus       639 ~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~-~~~~d~~wrLFreIlEGLaYIH~~-  716 (1351)
T KOG1035|consen  639 SVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHF-NSQRDEAWRLFREILEGLAYIHDQ-  716 (1351)
T ss_pred             ccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhccc-chhhHHHHHHHHHHHHHHHHHHhC-
Confidence                                          013677899988877777754221 114567889999999999999999 


Q ss_pred             CceeeccCCCCeeeCCCCCeEEcccCCCcccC----------------------CCCcccccccccccccccCCC---CC
Q 024659          176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR----------------------DGRSYSTNLAFTPPEYLRTGR---VT  230 (264)
Q Consensus       176 ~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~----------------------~~~~~~~~~~y~aPE~~~~~~---~~  230 (264)
                      |+|||||||.||+++++..+||+|||+|+...                      ......||..|+|||++.+..   |+
T Consensus       717 giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn  796 (1351)
T KOG1035|consen  717 GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYN  796 (1351)
T ss_pred             ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccccc
Confidence            99999999999999999999999999998621                      012346789999999997654   99


Q ss_pred             CccceechHHHHHHHHhC
Q 024659          231 PESVMYSFGTLLLDLLSG  248 (264)
Q Consensus       231 ~~~DiwslG~~l~el~~g  248 (264)
                      .|+||||||++++||+.-
T Consensus       797 ~KiDmYSLGIVlFEM~yP  814 (1351)
T KOG1035|consen  797 SKIDMYSLGIVLFEMLYP  814 (1351)
T ss_pred             chhhhHHHHHHHHHHhcc
Confidence            999999999999999864

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-32  Score=228.32  Aligned_cols=182  Identities=19%  Similarity=0.274  Sum_probs=151.3

Q ss_pred             ccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhc--CCCCCccccceeeEeCC----cceEEE
Q 024659           59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQ--LRNRRLANLLGCCCEGD----ERLLVA  132 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~~i~~~~~~~~~~~----~~~lv~  132 (264)
                      ..+++.||+|.||.||+|.+.+. .||||++....   .+...+|.++.+.  |+|+||+.+++.-..++    ++|||+
T Consensus       213 I~L~e~IGkGRyGEVwrG~wrGe-~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvT  288 (513)
T KOG2052|consen  213 IVLQEIIGKGRFGEVWRGRWRGE-DVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVT  288 (513)
T ss_pred             eEEEEEecCccccceeeccccCC-ceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEee
Confidence            46778899999999999998654 89999998654   2345677777766  49999999999864433    589999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC-------CCceeeccCCCCeeeCCCCCeEEcccCCCcc
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-------ERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~-------~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~  205 (264)
                      +|.+.|||+|+|.   ...++....++++..++.||.+||..       ..|.|||||+.|||+..++...|+|+|+|-.
T Consensus       289 dYHe~GSL~DyL~---r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~  365 (513)
T KOG2052|consen  289 DYHEHGSLYDYLN---RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR  365 (513)
T ss_pred             ecccCCcHHHHHh---hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEE
Confidence            9999999999995   35689999999999999999999963       4699999999999999999999999999865


Q ss_pred             cCC--------CCcccccccccccccccCCC----C-CC-ccceechHHHHHHHHh
Q 024659          206 SRD--------GRSYSTNLAFTPPEYLRTGR----V-TP-ESVMYSFGTLLLDLLS  247 (264)
Q Consensus       206 ~~~--------~~~~~~~~~y~aPE~~~~~~----~-~~-~~DiwslG~~l~el~~  247 (264)
                      ...        .+...||.+|||||++.+..    + +. .+||||||.++||+.-
T Consensus       366 h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiar  421 (513)
T KOG2052|consen  366 HDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIAR  421 (513)
T ss_pred             ecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHH
Confidence            432        24458899999999997543    2 22 5999999999999864

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=8.2e-33  Score=222.51  Aligned_cols=195  Identities=17%  Similarity=0.240  Sum_probs=170.5

Q ss_pred             CccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l  130 (264)
                      ..++.++..||.|+|.+|..++ ....+.+|+|+++++.   .++......|-.+..+- .||.++.+..++++...+++
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff  328 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF  328 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence            4567788889999999999999 4567789999998653   33455566776666665 58999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC---
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR---  207 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~---  207 (264)
                      |.||++||+|--.+.  ..+.++++.++.+...|..||.|||+. ||++||||.+|+++|..|.+||.|+|+++..-   
T Consensus       329 vieyv~ggdlmfhmq--rqrklpeeharfys~ei~lal~flh~r-giiyrdlkldnvlldaeghikltdygmcke~l~~g  405 (593)
T KOG0695|consen  329 VIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEICLALNFLHER-GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPG  405 (593)
T ss_pred             EEEEecCcceeeehh--hhhcCcHHHhhhhhHHHHHHHHHHhhc-CeeeeeccccceEEccCCceeecccchhhcCCCCC
Confidence            999999999876664  456899999999999999999999999 99999999999999999999999999988542   


Q ss_pred             -CCCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCC
Q 024659          208 -DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       208 -~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                       ....+.||+.|.|||.+.+..|....|+|+||++++||+.|+.||.
T Consensus       406 d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfd  452 (593)
T KOG0695|consen  406 DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD  452 (593)
T ss_pred             cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcc
Confidence             2345689999999999999999999999999999999999999994

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.98  E-value=1.9e-31  Score=213.18  Aligned_cols=193  Identities=23%  Similarity=0.260  Sum_probs=169.2

Q ss_pred             cccccCCCCCCCeEEEEEeCC-CCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCC
Q 024659           60 NIVSEHGEKAPNVVYKGKLEN-QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN  137 (264)
Q Consensus        60 ~~l~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  137 (264)
                      .+...||.|++|.||++...+ ++.+++|.+...... ..+.+.+|++.+++++|+|++++++.+......++++|++++
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~   81 (225)
T smart00221        2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEG   81 (225)
T ss_pred             ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCC
Confidence            345677999999999999655 889999999876654 567789999999999999999999999888899999999999


Q ss_pred             CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-----Ccc
Q 024659          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----RSY  212 (264)
Q Consensus       138 ~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-----~~~  212 (264)
                      ++|.+++.... ..+++..+..++.+++.++.+||+. +++|+|++|.||+++.++.++|+|||.+......     ...
T Consensus        82 ~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~  159 (225)
T smart00221       82 GDLFDYLRKKG-GKLSEEEARFYLRQILEALEYLHSL-GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTV  159 (225)
T ss_pred             CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccce
Confidence            99999986422 1288999999999999999999999 9999999999999999999999999998866544     344


Q ss_pred             cccccccccccc-cCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          213 STNLAFTPPEYL-RTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       213 ~~~~~y~aPE~~-~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      .++..|++||.+ ....++.++|+|+||+++++|++|+.||..
T Consensus       160 ~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      160 KGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             eccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            567789999998 666688899999999999999999999966

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.97  E-value=1.5e-32  Score=231.33  Aligned_cols=199  Identities=16%  Similarity=0.160  Sum_probs=170.8

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCC------CCccccceeeEeCCcce
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN------RRLANLLGCCCEGDERL  129 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h------~~i~~~~~~~~~~~~~~  129 (264)
                      +.|.+.+-.|+|-|++|-+|.+. .+..||||++..+. .-.+.-..|+++|++|..      -|+++++-.|.+.+++|
T Consensus       432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLC  510 (752)
T KOG0670|consen  432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLC  510 (752)
T ss_pred             ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeE
Confidence            55888999999999999999954 47899999998754 223445679999999953      48999999999999999


Q ss_pred             EEEecCCCCCHHHhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC-CCeEEcccCCCcccC
Q 024659          130 LVAEYMPNDTLAKHLFHW-ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSR  207 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~-~~~kl~dfg~~~~~~  207 (264)
                      ||||.+ ..+|.++|+.- .+-++...++..++.|++.||..|-.- |++|.||||+|||+++. ..+||||||.|....
T Consensus       511 lVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c-~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~  588 (752)
T KOG0670|consen  511 LVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC-GVLHADIKPDNILVNESKNILKLCDFGSASFAS  588 (752)
T ss_pred             EEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc-CeeecccCccceEeccCcceeeeccCccccccc
Confidence            999988 56899999753 345678889999999999999999888 99999999999999976 679999999988654


Q ss_pred             CC--CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCccc
Q 024659          208 DG--RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS  258 (264)
Q Consensus       208 ~~--~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~~  258 (264)
                      ..  ..+..+.-|.|||++.+-.|+...|+||+||+||||+||+.+|++...+
T Consensus       589 eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN  641 (752)
T KOG0670|consen  589 ENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNN  641 (752)
T ss_pred             cccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcH
Confidence            43  3346677899999999999999999999999999999999999977654

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=6.2e-31  Score=220.10  Aligned_cols=131  Identities=16%  Similarity=0.188  Sum_probs=114.6

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC-----C---CCccccceeeEe---
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-----N---RRLANLLGCCCE---  124 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h---~~i~~~~~~~~~---  124 (264)
                      .+|.++++||-|.|++||++++ .+.+.||+|+.+... ...+....|+.+|++++     |   .+||++++.|..   
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp  156 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP  156 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence            4688999999999999999995 557899999987644 34567888999999984     2   359999999965   


Q ss_pred             -CCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeee
Q 024659          125 -GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF  189 (264)
Q Consensus       125 -~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~  189 (264)
                       +.++++|+|++ |.+|..++.....++++...++.|++||+.||.|||++.||+|.||||+|||+
T Consensus       157 NG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl  221 (590)
T KOG1290|consen  157 NGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLL  221 (590)
T ss_pred             CCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeee
Confidence             45799999998 66899999876778999999999999999999999999999999999999999

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=4.6e-32  Score=238.75  Aligned_cols=193  Identities=22%  Similarity=0.297  Sum_probs=165.2

Q ss_pred             cccccCCCCCCCeEEEEEe-CC----CCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           60 NIVSEHGEKAPNVVYKGKL-EN----QFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        60 ~~l~~lg~G~~g~Vy~~~~-~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      +..+.||+|+||+||+|.+ ..    +-+||+|++.... .+...++..|+-.|.+++|||+++++++|.... .-||++
T Consensus       699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq  777 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ  777 (1177)
T ss_pred             hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence            4556789999999999985 33    4567899887654 334567999999999999999999999998765 778999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCcc-
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY-  212 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~~-  212 (264)
                      |++.|+|.++++. ...++..+..+.|+.||++||.|||.+ +++||||-++|||+..-..+|+.|||+++........ 
T Consensus       778 ~mP~G~LlDyvr~-hr~~igsq~lLnw~~QIAkgM~YLe~q-rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey  855 (1177)
T KOG1025|consen  778 LMPLGCLLDYVRE-HRDNIGSQDLLNWCYQIAKGMKYLEEQ-RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY  855 (1177)
T ss_pred             hcccchHHHHHHH-hhccccHHHHHHHHHHHHHHHHHHHhc-chhhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence            9999999999976 566888899999999999999999999 9999999999999999999999999999976554332 


Q ss_pred             -----cccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          213 -----STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       213 -----~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                           ...+.|+|-|.+....++.++|||||||++||++| |..|...-
T Consensus       856 ~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi  904 (1177)
T KOG1025|consen  856 SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGI  904 (1177)
T ss_pred             cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCC
Confidence                 23477999999999999999999999999999876 55665443

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=9.8e-31  Score=236.65  Aligned_cols=192  Identities=24%  Similarity=0.348  Sum_probs=164.3

Q ss_pred             ccCCCCCCCeEEEEEeC--------CCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEEE
Q 024659           63 SEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      +.+|.|+||.|++|...        ....||+|.++... ..+.+.+..|+++++.+ +|+||+.++|+|......++|.
T Consensus       302 ~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~  381 (609)
T KOG0200|consen  302 KYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIV  381 (609)
T ss_pred             ceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEE
Confidence            36799999999999843        14578999998653 34456799999999999 6999999999999988999999


Q ss_pred             ecCCCCCHHHhhhcCC------C--------CCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEc
Q 024659          133 EYMPNDTLAKHLFHWE------T--------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLS  198 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~------~--------~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~  198 (264)
                      ||+..|+|.+++++..      .        ..++....+.++.||+.|++||++. +++||||-++|||+.++..+|++
T Consensus       382 Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~-~~vHRDLAaRNVLi~~~~~~kIa  460 (609)
T KOG0200|consen  382 EYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV-PCVHRDLAARNVLITKNKVIKIA  460 (609)
T ss_pred             EeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC-CccchhhhhhhEEecCCCEEEEc
Confidence            9999999999997533      0        2388889999999999999999999 99999999999999999999999


Q ss_pred             ccCCCcccCCCCccc-------ccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          199 CFGLMKNSRDGRSYS-------TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       199 dfg~~~~~~~~~~~~-------~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      |||+++.......+.       -...|||||.+....|+.++||||||++||||++...+++..
T Consensus       461 DFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~  524 (609)
T KOG0200|consen  461 DFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPG  524 (609)
T ss_pred             cccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCC
Confidence            999998654433321       235699999999989999999999999999999987666554

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.97  E-value=2.4e-30  Score=227.27  Aligned_cols=195  Identities=16%  Similarity=0.181  Sum_probs=146.7

Q ss_pred             ccccccccCCCCCCCeEEEEEe-----------------CCCCEEEEEEeCCCCChhHHHH--------------HHHHH
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-----------------ENQFRIAVKRFNRSAWPDARQF--------------LEEAR  105 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~~~--------------~~e~~  105 (264)
                      +.|.+.++||+|+||+||+|.+                 ..++.||+|++........+++              ..|+.
T Consensus       145 d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~  224 (507)
T PLN03224        145 DDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAY  224 (507)
T ss_pred             cCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHH
Confidence            4567788889999999999964                 2356899999976443222222              34666


Q ss_pred             HHhcCCCCCc-----cccceeeEe--------CCcceEEEecCCCCCHHHhhhcCC----------------------CC
Q 024659          106 AVGQLRNRRL-----ANLLGCCCE--------GDERLLVAEYMPNDTLAKHLFHWE----------------------TQ  150 (264)
Q Consensus       106 ~l~~l~h~~i-----~~~~~~~~~--------~~~~~lv~e~~~~~sL~~~l~~~~----------------------~~  150 (264)
                      ++.+++|.++     ++++++|..        ....++|+||+++++|.+++....                      ..
T Consensus       225 ~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~  304 (507)
T PLN03224        225 MCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQD  304 (507)
T ss_pred             HHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccc
Confidence            7777766543     667777643        345799999999999999885311                      11


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc-----cccccccccccccc
Q 024659          151 PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-----YSTNLAFTPPEYLR  225 (264)
Q Consensus       151 ~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~y~aPE~~~  225 (264)
                      .+++..+..++.|++.+|.|||+. +++||||||+||+++.++.++|+|||++........     ...++.|+|||.+.
T Consensus       305 ~~~~~~~~~i~~ql~~aL~~lH~~-~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~  383 (507)
T PLN03224        305 KRDINVIKGVMRQVLTGLRKLHRI-GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELV  383 (507)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhc
Confidence            235677889999999999999999 999999999999999999999999999875433221     12368899999885


Q ss_pred             CCC--------------------C--CCccceechHHHHHHHHhCCC-CC
Q 024659          226 TGR--------------------V--TPESVMYSFGTLLLDLLSGKH-IP  252 (264)
Q Consensus       226 ~~~--------------------~--~~~~DiwslG~~l~el~~g~~-~~  252 (264)
                      ...                    +  ..+.|+||+||++++|++|.. |+
T Consensus       384 ~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~  433 (507)
T PLN03224        384 MPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPV  433 (507)
T ss_pred             CCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCc
Confidence            432                    1  124799999999999999985 44

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.97  E-value=3.2e-30  Score=208.02  Aligned_cols=183  Identities=23%  Similarity=0.319  Sum_probs=162.6

Q ss_pred             CCCeEEEEEeC-CCCEEEEEEeCCCCChh-HHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCCHHHhhhc
Q 024659           69 APNVVYKGKLE-NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFH  146 (264)
Q Consensus        69 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~  146 (264)
                      +||.||++... +++.+++|.+....... .+.+.+|++.+++++|+|++++++.+......++++||+++++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            47899999965 48899999998765444 67899999999999999999999999988899999999999999999863


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---Cccccccccccccc
Q 024659          147 WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYSTNLAFTPPEY  223 (264)
Q Consensus       147 ~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~  223 (264)
                        ...+++..+..++.+++.++.+||+. +++|+||+|+||++++++.++++|||.+......   ....++..|++||.
T Consensus        81 --~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~  157 (244)
T smart00220       81 --RGRLSEDEARFYARQILSALEYLHSN-GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEV  157 (244)
T ss_pred             --ccCCCHHHHHHHHHHHHHHHHHHHHc-CeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHH
Confidence              22388999999999999999999999 9999999999999999999999999998865543   34456788999999


Q ss_pred             ccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          224 LRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       224 ~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      ..+..++.++|+||||+++++|++|..||..
T Consensus       158 ~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~  188 (244)
T smart00220      158 LLGKGYGKAVDVWSLGVILYELLTGKPPFPG  188 (244)
T ss_pred             HccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            9888899999999999999999999999865

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.97  E-value=3.9e-30  Score=230.73  Aligned_cols=194  Identities=19%  Similarity=0.182  Sum_probs=137.6

Q ss_pred             CCccccccccCCCCCCCeEEEEEe-CC----CCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCcccccee------eE
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKL-EN----QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGC------CC  123 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~-~~----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~------~~  123 (264)
                      ..+.|.+.+.||+|+||.||+|.+ .+    +..||+|++......  +...++  .++...+.++..+...      ..
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence            346688889999999999999995 44    689999998653321  111111  1222222222222221      23


Q ss_pred             eCCcceEEEecCCCCCHHHhhhcCCCC------------------CCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCC
Q 024659          124 EGDERLLVAEYMPNDTLAKHLFHWETQ------------------PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY  185 (264)
Q Consensus       124 ~~~~~~lv~e~~~~~sL~~~l~~~~~~------------------~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~  185 (264)
                      .....++|+||+++++|.+++......                  ......+..++.|++.||.|||+. +|+||||||+
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~-gIiHRDLKP~  284 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST-GIVHRDVKPQ  284 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC-CEEeCcCCHH
Confidence            456789999999999999988642110                  011234667999999999999999 9999999999


Q ss_pred             CeeeCC-CCCeEEcccCCCcccCCC-----CcccccccccccccccCCC----------------------CCCccceec
Q 024659          186 RIVFDD-DVNPRLSCFGLMKNSRDG-----RSYSTNLAFTPPEYLRTGR----------------------VTPESVMYS  237 (264)
Q Consensus       186 Nil~~~-~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~----------------------~~~~~Diws  237 (264)
                      |||++. ++.+||+|||+++.....     ....+++.|+|||.+....                      ++.++||||
T Consensus       285 NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS  364 (566)
T PLN03225        285 NIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS  364 (566)
T ss_pred             HEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence            999986 589999999999754322     3456788999999663222                      334569999


Q ss_pred             hHHHHHHHHhCCCCCC
Q 024659          238 FGTLLLDLLSGKHIPP  253 (264)
Q Consensus       238 lG~~l~el~~g~~~~~  253 (264)
                      |||+||||+++..++.
T Consensus       365 lGviL~el~~~~~~~~  380 (566)
T PLN03225        365 AGLIFLQMAFPNLRSD  380 (566)
T ss_pred             HHHHHHHHHhCcCCCc
Confidence            9999999998765543

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.97  E-value=9.1e-31  Score=204.91  Aligned_cols=191  Identities=21%  Similarity=0.282  Sum_probs=158.0

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcC-CCCCcccccee-eEeCCcceEEEec
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGC-CCEGDERLLVAEY  134 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~-~~~~~~~~lv~e~  134 (264)
                      .|++.+.+|+|.||.+.++++ .++..+++|-++... ....+|.+|...--.| .|.||+.-|++ |++.+.+++++||
T Consensus        25 ~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~  103 (378)
T KOG1345|consen   25 VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF  103 (378)
T ss_pred             hhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence            477888899999999999994 567899999998765 3456799998887777 48999988887 5566778899999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeC--CCCCeEEcccCCCcccCCCCc-
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD--DDVNPRLSCFGLMKNSRDGRS-  211 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~--~~~~~kl~dfg~~~~~~~~~~-  211 (264)
                      ++.|+|..-+   ...++-+.....++.|++.||.|||++ ++||||||.+||||-  +..++||+|||+.+....... 
T Consensus       104 aP~gdL~snv---~~~GigE~~~K~v~~ql~SAi~fMHsk-nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~  179 (378)
T KOG1345|consen  104 APRGDLRSNV---EAAGIGEANTKKVFAQLLSAIEFMHSK-NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKY  179 (378)
T ss_pred             Cccchhhhhc---CcccccHHHHHHHHHHHHHHHHHhhcc-chhhcccccceEEEecCCccEEEeeecccccccCceehh
Confidence            9999999877   456788888899999999999999999 999999999999994  335899999999875444332 


Q ss_pred             ccccccccccccccCC---C--CCCccceechHHHHHHHHhCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTG---R--VTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~---~--~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                      ...+..|.+||.+...   .  ..+.+|+|.||++++.+++|..|..
T Consensus       180 ~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQ  226 (378)
T KOG1345|consen  180 LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQ  226 (378)
T ss_pred             hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcch
Confidence            2345678899977432   2  6788999999999999999999875

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.96  E-value=8.1e-30  Score=203.52  Aligned_cols=192  Identities=17%  Similarity=0.240  Sum_probs=159.2

Q ss_pred             cccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCC--CChhHHHHHHHHHHHhcCCCCCccccceeeEeC------Ccc
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEG------DER  128 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~  128 (264)
                      +|.-++.+|.|+- .|-.+.+. .++.||+|+....  +....++..+|...+..+.|+||++++.++.-.      ...
T Consensus        18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~   96 (369)
T KOG0665|consen   18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV   96 (369)
T ss_pred             eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence            3556667788886 45445432 3778999987644  344567788999999999999999999998543      247


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      |+|||++.. +|...+.    ..++-.++..++.|+++|++|||+. ||+||||||+||++..++.+||.|||++.....
T Consensus        97 y~v~e~m~~-nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~-~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~  170 (369)
T KOG0665|consen   97 YLVMELMDA-NLCQVIL----MELDHETISYILYQMLCGIKHLHSA-GIIHRDLKPSNIVVNSDCTLKILDFGLARTEDT  170 (369)
T ss_pred             HHHHHhhhh-HHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhc-ceeecccCcccceecchhheeeccchhhcccCc
Confidence            899999944 7888774    3467788999999999999999999 999999999999999999999999999986544


Q ss_pred             C---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 G---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 ~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .   ..+..+..|.|||++.+-.+.+.+||||+||++.||++|...|++..
T Consensus       171 ~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d  221 (369)
T KOG0665|consen  171 DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKD  221 (369)
T ss_pred             ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCch
Confidence            3   44567889999999998889999999999999999999999998554

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.96  E-value=1.1e-29  Score=209.30  Aligned_cols=195  Identities=21%  Similarity=0.260  Sum_probs=167.7

Q ss_pred             ccccccccCCCCCCCeEEEEEe-C---CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC-CCCccccceeeEeCCcceEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-E---NQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv  131 (264)
                      ..|..+.+||+|+|++||++.+ .   ..+.||+|.+...+  ...++.+|+++|..+. +.||+++.+++..++...+|
T Consensus        36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~iv  113 (418)
T KOG1167|consen   36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIV  113 (418)
T ss_pred             hhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEE
Confidence            4477888899999999999984 3   47899999998765  3456889999999995 89999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC-CCeEEcccCCCccc----
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNS----  206 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~-~~~kl~dfg~~~~~----  206 (264)
                      +||+++....++.++     ++...+..+++.++.||.++|.+ ||+||||||+|++.+.. +.-.|.|||+|...    
T Consensus       114 lp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~-GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~  187 (418)
T KOG1167|consen  114 LPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKN-GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQ  187 (418)
T ss_pred             ecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhcc-CccccCCCccccccccccCCceEEechhHHHHHhhh
Confidence            999999999998863     77889999999999999999999 99999999999999954 88999999998610    


Q ss_pred             -------------CC--C-----------------------------CcccccccccccccccCCC-CCCccceechHHH
Q 024659          207 -------------RD--G-----------------------------RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTL  241 (264)
Q Consensus       207 -------------~~--~-----------------------------~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~  241 (264)
                                   .+  +                             ....||++|+|||++.... .+++.||||.|++
T Consensus       188 ~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI  267 (418)
T KOG1167|consen  188 QTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVI  267 (418)
T ss_pred             hhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccce
Confidence                         00  0                             0124689999999998766 7899999999999


Q ss_pred             HHHHHhCCCCCCCCcccc
Q 024659          242 LLDLLSGKHIPPSHVSSF  259 (264)
Q Consensus       242 l~el~~g~~~~~~~~~~~  259 (264)
                      ++.++++..||....++.
T Consensus       268 ~Lslls~~~PFf~a~dd~  285 (418)
T KOG1167|consen  268 LLSLLSRRYPFFKAKDDA  285 (418)
T ss_pred             eehhhccccccccCcccc
Confidence            999999999998666553

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.96  E-value=5.4e-30  Score=221.39  Aligned_cols=197  Identities=17%  Similarity=0.192  Sum_probs=175.4

Q ss_pred             CCCccccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      +.-++|++++++|.|+||.|||++ ...++..|+|.++.....+..-+.+|+-+++..+|+||+.+++.+......|+.|
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicM   91 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICM   91 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEE
Confidence            455678999999999999999999 5668999999999877667777889999999999999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC----C
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR----D  208 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~----~  208 (264)
                      |||.+|+|.+...  -..++++.++..+++..+.|++|||++ +-+|||||-.||++++.|.+|+.|||.+..+.    .
T Consensus        92 EycgggslQdiy~--~TgplselqiayvcRetl~gl~ylhs~-gk~hRdiKGanilltd~gDvklaDfgvsaqitati~K  168 (829)
T KOG0576|consen   92 EYCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLKYLHSQ-GKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAK  168 (829)
T ss_pred             EecCCCcccceee--ecccchhHHHHHHHhhhhccchhhhcC-CcccccccccceeecccCceeecccCchhhhhhhhhh
Confidence            9999999998764  456889999999999999999999999 99999999999999999999999999976543    3


Q ss_pred             CCccccccccccccccc---CCCCCCccceechHHHHHHHHhCCCCCC
Q 024659          209 GRSYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       209 ~~~~~~~~~y~aPE~~~---~~~~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                      ...+.||+.|||||+..   .+.|...+|||++|++..|+---++|-.
T Consensus       169 rksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplf  216 (829)
T KOG0576|consen  169 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLF  216 (829)
T ss_pred             hhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCccc
Confidence            45678999999999874   4569999999999999999988876644

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.95  E-value=2.9e-27  Score=186.36  Aligned_cols=179  Identities=25%  Similarity=0.341  Sum_probs=156.9

Q ss_pred             CCCCCCCeEEEEEeCC-CCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCCHHH
Q 024659           65 HGEKAPNVVYKGKLEN-QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK  142 (264)
Q Consensus        65 lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~  142 (264)
                      ||.|.+|.||++...+ ++.+++|.+...... ....+.+|++.++.++|++++++++++......++++|++++++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            5899999999999654 889999999876543 34568899999999999999999999998889999999999899999


Q ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC-CCCeEEcccCCCcccCCC----Cccccccc
Q 024659          143 HLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSRDG----RSYSTNLA  217 (264)
Q Consensus       143 ~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~-~~~~kl~dfg~~~~~~~~----~~~~~~~~  217 (264)
                      ++... ...++...+..++.+++.++.+||+. +++|+||+|.||+++. ++.++|+|||.+......    ........
T Consensus        81 ~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~-~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~  158 (215)
T cd00180          81 LLKEN-EGKLSEDEILRILLQILEGLEYLHSN-GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPA  158 (215)
T ss_pred             HHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCC
Confidence            98642 24688999999999999999999999 9999999999999999 899999999998765543    33456788


Q ss_pred             ccccccccCC-CCCCccceechHHHHHHH
Q 024659          218 FTPPEYLRTG-RVTPESVMYSFGTLLLDL  245 (264)
Q Consensus       218 y~aPE~~~~~-~~~~~~DiwslG~~l~el  245 (264)
                      |++||..... ..+.++|+|++|+++++|
T Consensus       159 ~~~pe~~~~~~~~~~~~D~~~lg~~~~~l  187 (215)
T cd00180         159 YMAPEVLLGKGYYSEKSDIWSLGVILYEL  187 (215)
T ss_pred             ccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence            9999999877 788999999999999887

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.95  E-value=4.7e-29  Score=220.29  Aligned_cols=191  Identities=22%  Similarity=0.262  Sum_probs=152.7

Q ss_pred             CccccccccCCCCCCC-eEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEEEe
Q 024659           56 FAMENIVSEHGEKAPN-VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      |...+++   |.|+.| .||+|..++. .||||++-...   ..-+.+|+..|+.- +||||+++++.-.+....||..|
T Consensus       511 ~~~~eil---G~Gs~Gt~Vf~G~ye~R-~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE  583 (903)
T KOG1027|consen  511 FSPKEIL---GYGSNGTVVFRGVYEGR-EVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE  583 (903)
T ss_pred             eccHHHc---ccCCCCcEEEEEeeCCc-eehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence            4445555   666654 5899987654 99999987543   23467899999998 49999999999999999999999


Q ss_pred             cCCCCCHHHhhhcC-CCCCCCH-HHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC---C--CCeEEcccCCCccc
Q 024659          134 YMPNDTLAKHLFHW-ETQPMKW-AMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---D--VNPRLSCFGLMKNS  206 (264)
Q Consensus       134 ~~~~~sL~~~l~~~-~~~~~~~-~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~---~--~~~kl~dfg~~~~~  206 (264)
                      .|. .+|.+++... ....... ...+..+.|++.||++||+. +||||||||.||||+.   +  ..++|+|||+++..
T Consensus       584 LC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl-~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl  661 (903)
T KOG1027|consen  584 LCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL-KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL  661 (903)
T ss_pred             Hhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc-ccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence            994 5899999642 1111111 34577899999999999998 9999999999999975   3  56999999999875


Q ss_pred             CCC-------CcccccccccccccccCCCCCCccceechHHHHHHHHhC-CCCCCCC
Q 024659          207 RDG-------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG-KHIPPSH  255 (264)
Q Consensus       207 ~~~-------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g-~~~~~~~  255 (264)
                      ..+       ....||-+|+|||++....-+..+||+||||++|+.++| .+||-..
T Consensus       662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~  718 (903)
T KOG1027|consen  662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDS  718 (903)
T ss_pred             CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCch
Confidence            443       334678999999999988888899999999999999998 6788643

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.94  E-value=6.8e-27  Score=191.53  Aligned_cols=194  Identities=19%  Similarity=0.228  Sum_probs=159.6

Q ss_pred             cccccCCCCCCCeEEEEEeC------CCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeC-CcceEE
Q 024659           60 NIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEG-DERLLV  131 (264)
Q Consensus        60 ~~l~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~lv  131 (264)
                      ++...+-+|.||.||.|.+.      +.+.|.+|.++....+ +...+..|.-.+..+.|||++.+.+++.+. ...+.+
T Consensus       287 ~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~  366 (563)
T KOG1024|consen  287 RLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVL  366 (563)
T ss_pred             echhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEE
Confidence            34445578999999999653      3456778888755422 345678899999999999999999998764 457888


Q ss_pred             EecCCCCCHHHhhh-----cC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcc
Q 024659          132 AEYMPNDTLAKHLF-----HW-ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (264)
Q Consensus       132 ~e~~~~~sL~~~l~-----~~-~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~  205 (264)
                      +.+..-|+|..++.     +. ..+.++-.+...++.|++.|+.|||+. +++|.||.++|.+||+...+||+|-.+++.
T Consensus       367 y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~-~ViHkDiAaRNCvIdd~LqVkltDsaLSRD  445 (563)
T KOG1024|consen  367 YPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH-GVIHKDIAARNCVIDDQLQVKLTDSALSRD  445 (563)
T ss_pred             EeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc-CcccchhhhhcceehhheeEEeccchhccc
Confidence            89998899999997     22 235667778899999999999999999 999999999999999999999999998886


Q ss_pred             cCC------CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          206 SRD------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       206 ~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      .-+      ++..+....||+||.+....|+..+|+||||+++|||+|-...+..
T Consensus       446 LFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~Pya  500 (563)
T KOG1024|consen  446 LFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYA  500 (563)
T ss_pred             cCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCcc
Confidence            543      3445667899999999999999999999999999999986654443

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.93  E-value=9e-26  Score=190.82  Aligned_cols=166  Identities=14%  Similarity=0.004  Sum_probs=125.5

Q ss_pred             cccccccCCCCCCCeEEEEEeC--CCCEEEEEEeCCCC-----ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE--NQFRIAVKRFNRSA-----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      .|.+.+.||+|+||+||++.+.  +++.+|+|++....     ....+.+.+|+++|++++|+|+++.+..   .+..++
T Consensus        19 ~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~~~L   95 (365)
T PRK09188         19 RFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGKDGL   95 (365)
T ss_pred             CceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCCcEE
Confidence            3667777899999999999853  57778999876431     1124568899999999999998853322   245799


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecc-CCCCeeeCCCCCeEEcccCCCcccCCC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL-NAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl-~~~Nil~~~~~~~kl~dfg~~~~~~~~  209 (264)
                      ||||+++++|... .  .   ..   ...++.|++.+|.|||+. |++|||| ||+||+++.++.++|+|||+++.....
T Consensus        96 VmE~~~G~~L~~~-~--~---~~---~~~~~~~i~~aL~~lH~~-gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~  165 (365)
T PRK09188         96 VRGWTEGVPLHLA-R--P---HG---DPAWFRSAHRALRDLHRA-GITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRR  165 (365)
T ss_pred             EEEccCCCCHHHh-C--c---cc---hHHHHHHHHHHHHHHHHC-CCeeCCCCCcceEEEcCCCCEEEEECccceecccC
Confidence            9999999999632 1  1   11   146789999999999999 9999999 999999999999999999999855432


Q ss_pred             C------------cccccccccccccccCCC------CCCcccee
Q 024659          210 R------------SYSTNLAFTPPEYLRTGR------VTPESVMY  236 (264)
Q Consensus       210 ~------------~~~~~~~y~aPE~~~~~~------~~~~~Diw  236 (264)
                      .            ...++..|+|||++....      .+..+|-|
T Consensus       166 ~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW  210 (365)
T PRK09188        166 GALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW  210 (365)
T ss_pred             cchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence            1            234567799999985432      33446665

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.93  E-value=1.1e-25  Score=189.92  Aligned_cols=194  Identities=18%  Similarity=0.127  Sum_probs=161.1

Q ss_pred             cccccccCCCCCCCeEEEEEeCCC--CEEEEEEeCCCCChhHHHHHHHHHHHhcCCC----CCccccceee-EeCCcceE
Q 024659           58 MENIVSEHGEKAPNVVYKGKLENQ--FRIAVKRFNRSAWPDARQFLEEARAVGQLRN----RRLANLLGCC-CEGDERLL  130 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~~i~~~~~~~-~~~~~~~l  130 (264)
                      .|.+.++||+|+||.||.+.....  ..+|+|............+..|..++..+..    +++..+++.. ......++
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            688999999999999999996553  4789998876543332357778888888862    6888888888 46667899


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC-----CCeEEcccCCCcc
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-----VNPRLSCFGLMKN  205 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~-----~~~kl~dfg~~~~  205 (264)
                      ||+.+ |.+|.++......+.++..++..++.|++.+|.++|+. |++||||||.|+++...     ..+.|.|||+++.
T Consensus        99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~-G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~  176 (322)
T KOG1164|consen   99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK-GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARR  176 (322)
T ss_pred             EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc-CcccCCcCHHHeeecCCCCcccceEEEEecCCCcc
Confidence            99987 77999988654557899999999999999999999999 99999999999999854     4699999999982


Q ss_pred             cC----------CC----CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCC
Q 024659          206 SR----------DG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       206 ~~----------~~----~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                      ..          ..    ....||..|+++.+..+...+++.|+||++.++.|++.|..|..
T Consensus       177 ~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~  238 (322)
T KOG1164|consen  177 FKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWE  238 (322)
T ss_pred             ccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCc
Confidence            11          11    12348999999999999999999999999999999999996653

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.93  E-value=7.9e-26  Score=174.60  Aligned_cols=192  Identities=18%  Similarity=0.165  Sum_probs=163.4

Q ss_pred             cccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCC-CCccccceeeEeCCcceEEEecC
Q 024659           58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN-RRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      .|.++++||.|+||.+|.|. ..+|+.||+|.-.....  ...+.-|..+.+.|++ ..|..+..+..+...-.+||+.+
T Consensus        16 ky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL   93 (341)
T KOG1163|consen   16 KYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL   93 (341)
T ss_pred             ceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc
Confidence            48899999999999999999 78899999999875442  2346678888888875 67888888888888889999988


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC---CCCeEEcccCCCcccCCC---
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRDG---  209 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~---~~~~kl~dfg~~~~~~~~---  209 (264)
                       |.||++++.- ..+.++..+++-++-|++.-+.|+|.+ +++||||||+|+|..-   ...+.++|||+++...+.   
T Consensus        94 -GPsLEdLfnf-C~R~ftmkTvLMLaDQml~RiEyvH~r-~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~  170 (341)
T KOG1163|consen   94 -GPSLEDLFNF-CSRRFTMKTVLMLADQMLSRIEYVHLR-NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTR  170 (341)
T ss_pred             -CccHHHHHHH-HhhhhhHHhHHHHHHHHHHHHHHHHhh-ccccccCCccceeeccccccceEEEEeccchhhhcccccc
Confidence             7799998854 667899999999999999999999999 9999999999999963   356999999999865432   


Q ss_pred             --------CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          210 --------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       210 --------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                              ....||.+|++-....+...+.+.|+-|+|.+|.++--|..|..+
T Consensus       171 ~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQg  223 (341)
T KOG1163|consen  171 QHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQG  223 (341)
T ss_pred             ccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccc
Confidence                    345788999998888888899999999999999999888887653

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.93  E-value=2.3e-25  Score=179.24  Aligned_cols=191  Identities=19%  Similarity=0.236  Sum_probs=167.0

Q ss_pred             ccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC-CCCccccceeeEeCCcceEEEecCC
Q 024659           59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      |.+-++||+|+||.++.|. +-+++.||+|.-+..+  ++..++.|.+..+.|. .++|..++-+...+.+-.||+|.+ 
T Consensus        30 yrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-  106 (449)
T KOG1165|consen   30 YRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-  106 (449)
T ss_pred             ceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-
Confidence            5677889999999999999 7788999999987654  4556778888888885 689999998888888889999988 


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC-----CCeEEcccCCCcccCCC--
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-----VNPRLSCFGLMKNSRDG--  209 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~-----~~~kl~dfg~~~~~~~~--  209 (264)
                      |.||+|++ +++++.|+..++..++.|++.-++++|++ .+|+|||||+|+||..-     ..+.++|||+|+...++  
T Consensus       107 GPSLEDLF-D~CgR~FSvKTV~miA~Qmi~rie~vH~k-~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~T  184 (449)
T KOG1165|consen  107 GPSLEDLF-DLCGRRFSVKTVAMIAKQMITRIEYVHEK-DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKT  184 (449)
T ss_pred             CcCHHHHH-HHhcCcccHHhHHHHHHHHHHHHHHHHhc-ceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccc
Confidence            77999987 56889999999999999999999999999 99999999999999643     45899999999976544  


Q ss_pred             ---------CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          210 ---------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       210 ---------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                               ....||.+||+=....+.+.+.+.|+-|||-++++.+-|..|..+
T Consensus       185 kqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQG  238 (449)
T KOG1165|consen  185 KQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG  238 (449)
T ss_pred             cccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccc
Confidence                     234789999999988999999999999999999999999988754

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.92  E-value=9.2e-26  Score=211.27  Aligned_cols=139  Identities=17%  Similarity=0.160  Sum_probs=109.5

Q ss_pred             CCccccceee-------EeCCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCC
Q 024659          113 RRLANLLGCC-------CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY  185 (264)
Q Consensus       113 ~~i~~~~~~~-------~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~  185 (264)
                      +||.++++.+       .+...+.+++|++ +++|.+++.. ....+++..++.++.||+.||.|||++ ||+||||||+
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-gIvHrDlKP~  109 (793)
T PLN00181         33 DYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN-PDRSVDAFECFHVFRQIVEIVNAAHSQ-GIVVHNVRPS  109 (793)
T ss_pred             HHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc-ccccccHHHHHHHHHHHHHHHHHHHhC-CeeeccCCch
Confidence            4677777766       2223466778877 5589999964 345689999999999999999999999 9999999999


Q ss_pred             CeeeCC-------------------CCCeEEcccCCCcccCCC--------------------CcccccccccccccccC
Q 024659          186 RIVFDD-------------------DVNPRLSCFGLMKNSRDG--------------------RSYSTNLAFTPPEYLRT  226 (264)
Q Consensus       186 Nil~~~-------------------~~~~kl~dfg~~~~~~~~--------------------~~~~~~~~y~aPE~~~~  226 (264)
                      ||||+.                   ++.+|++|||+++.....                    ....+|+.|+|||++.+
T Consensus       110 NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~  189 (793)
T PLN00181        110 CFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNG  189 (793)
T ss_pred             hEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhcc
Confidence            999954                   455667777776532110                    01246778999999998


Q ss_pred             CCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          227 GRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       227 ~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      ..++.++|||||||+||||++|.+|+..
T Consensus       190 ~~~~~~sDVwSlGviL~ELl~~~~~~~~  217 (793)
T PLN00181        190 SSSNCASDVYRLGVLLFELFCPVSSREE  217 (793)
T ss_pred             CCCCchhhhhhHHHHHHHHhhCCCchhh
Confidence            8999999999999999999999887753

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.91  E-value=2.4e-24  Score=167.90  Aligned_cols=140  Identities=16%  Similarity=0.157  Sum_probs=109.3

Q ss_pred             cccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCCh--h-------H-----------------HHHHHHHHHHhcCCCCCc
Q 024659           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--D-------A-----------------RQFLEEARAVGQLRNRRL  115 (264)
Q Consensus        62 l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~-------~-----------------~~~~~e~~~l~~l~h~~i  115 (264)
                      .+.||+|++|.||+|...+|+.||+|+++.....  .       .                 ....+|++.+.++.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            4578999999999999778999999999754211  0       0                 112358999999988877


Q ss_pred             cccceeeEeCCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCceeeccCCCCeeeCCCCC
Q 024659          116 ANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC-TSKERALYHDLNAYRIVFDDDVN  194 (264)
Q Consensus       116 ~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l-h~~~~i~H~dl~~~Nil~~~~~~  194 (264)
                      .....+..  ...+|||||++++++.....  ....++...+..++.|++.+|.++ |+. |++||||||+||+++ ++.
T Consensus        82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~l~H~~-giiHrDlkP~NIli~-~~~  155 (190)
T cd05147          82 PCPEPILL--KSHVLVMEFIGDDGWAAPRL--KDAPLSESKARELYLQVIQIMRILYQDC-RLVHADLSEYNLLYH-DGK  155 (190)
T ss_pred             CCCcEEEe--cCCEEEEEEeCCCCCcchhh--hcCCCCHHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEE-CCc
Confidence            54443322  23489999999877655432  345788899999999999999999 688 999999999999998 478


Q ss_pred             eEEcccCCCcccC
Q 024659          195 PRLSCFGLMKNSR  207 (264)
Q Consensus       195 ~kl~dfg~~~~~~  207 (264)
                      ++|+|||++....
T Consensus       156 v~LiDFG~a~~~~  168 (190)
T cd05147         156 LYIIDVSQSVEHD  168 (190)
T ss_pred             EEEEEccccccCC
Confidence            9999999987543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.91  E-value=3.3e-24  Score=169.48  Aligned_cols=168  Identities=11%  Similarity=0.043  Sum_probs=129.0

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHH---H------HHHHHHHHhcCCCCCccccceeeEeC--
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDAR---Q------FLEEARAVGQLRNRRLANLLGCCCEG--  125 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~---~------~~~e~~~l~~l~h~~i~~~~~~~~~~--  125 (264)
                      ..|+.++.+|.|+||.||+... ++..+|+|.+.+.......   .      +.+|++.+.++.|++|..+.+++...  
T Consensus        31 ~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~  109 (232)
T PRK10359         31 YNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAER  109 (232)
T ss_pred             CceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccc
Confidence            3477888889999999999766 4558999999865332222   2      57899999999999999999886543  


Q ss_pred             ------CcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcc
Q 024659          126 ------DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSC  199 (264)
Q Consensus       126 ------~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~d  199 (264)
                            +..+++|||++|.+|.++..      ++.    ....+++.++..+|+. |++|+|++|+||+++.++ ++|+|
T Consensus       110 ~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~-gi~H~Dikp~Nili~~~g-i~liD  177 (232)
T PRK10359        110 KTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQH-GMVSGDPHKGNFIVSKNG-LRIID  177 (232)
T ss_pred             ccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHc-CCccCCCChHHEEEeCCC-EEEEE
Confidence                  35789999999999988642      332    2456999999999999 999999999999999888 99999


Q ss_pred             cCCCcccCCCCcccccccccccccccCCCCCCccceechHHHHHHH
Q 024659          200 FGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL  245 (264)
Q Consensus       200 fg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el  245 (264)
                      ||...........        ..+.....+..++|+||||+++.-+
T Consensus       178 fg~~~~~~e~~a~--------d~~vler~y~~~~di~~lg~~~~~~  215 (232)
T PRK10359        178 LSGKRCTAQRKAK--------DRIDLERHYGIKNEIKDLGYYLLIY  215 (232)
T ss_pred             CCCcccccchhhH--------HHHHHHhHhcccccccceeEeehHH
Confidence            9987654322111        1133344566789999999987654

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.90  E-value=8.6e-23  Score=171.14  Aligned_cols=195  Identities=24%  Similarity=0.301  Sum_probs=165.4

Q ss_pred             ccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCCh---hHHHHHHHHHHHhcCCCC-CccccceeeEeCCcceEEEec
Q 024659           59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNR-RLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~-~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      |.+.+.||.|+|+.||++...  ..+++|.+......   ....+.+|+..+..+.|+ +++++.+.+......++++++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   79 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY   79 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence            456778899999999999977  68899999865433   356788999999999988 799999999777778999999


Q ss_pred             CCCCCHHHhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC-CeEEcccCCCcccCC----
Q 024659          135 MPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRD----  208 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~-~~kl~dfg~~~~~~~----  208 (264)
                      +.++++.+++..... ..+.......+..|++.++.++|+. +++|||+||+||+++..+ .+++.|||.+.....    
T Consensus        80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~-~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~  158 (384)
T COG0515          80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK-GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST  158 (384)
T ss_pred             CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence            999999977753211 2688899999999999999999999 999999999999999888 799999999874432    


Q ss_pred             ------CCcccccccccccccccC---CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 ------GRSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 ------~~~~~~~~~y~aPE~~~~---~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                            .....++..|++||.+.+   ...+...|+||+|++++++++|..||....
T Consensus       159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~  215 (384)
T COG0515         159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEK  215 (384)
T ss_pred             ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence                  244577899999999987   568889999999999999999999976544

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.90  E-value=1.2e-24  Score=170.95  Aligned_cols=199  Identities=22%  Similarity=0.315  Sum_probs=163.2

Q ss_pred             CccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCCh--hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      +++.+++-+|.+...|..|+|+++++ .++.|++......  -.++|..|.-.|+-+.||||+.+++.|..+.++.+|..
T Consensus       189 ~~~lnl~tkl~e~hsgelwrgrwqgn-divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq  267 (448)
T KOG0195|consen  189 VSSLNLITKLAESHSGELWRGRWQGN-DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQ  267 (448)
T ss_pred             hhhhhhhhhhccCCCcccccccccCc-chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeee
Confidence            45567788889999999999999876 6677777654322  24578899999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceee-ccCCCCeeeCCCCCeEEcccCCCcccCCCCcc
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY  212 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~-dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~~  212 (264)
                      |++.+||+..+....+--.+-.++.+++.++++|+.|||+...++-+ -|++..+++|++.+.+|+ .+-+++.-+....
T Consensus       268 ~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris-mad~kfsfqe~gr  346 (448)
T KOG0195|consen  268 YMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS-MADTKFSFQEVGR  346 (448)
T ss_pred             eccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee-cccceeeeecccc
Confidence            99999999999765555667789999999999999999998555555 799999999999888775 2334444444445


Q ss_pred             cccccccccccccCCC---CCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          213 STNLAFTPPEYLRTGR---VTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       213 ~~~~~y~aPE~~~~~~---~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .-.+.|++||.+...+   --+.+|+|||++++||+.|+..||+.-.
T Consensus       347 ~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadls  393 (448)
T KOG0195|consen  347 AYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLS  393 (448)
T ss_pred             ccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCC
Confidence            5568999999998665   3457999999999999999999997643

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.90  E-value=5.7e-23  Score=160.56  Aligned_cols=141  Identities=15%  Similarity=0.148  Sum_probs=111.4

Q ss_pred             cccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCCh---------------------h-----HHHHHHHHHHHhcCCCCCc
Q 024659           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP---------------------D-----ARQFLEEARAVGQLRNRRL  115 (264)
Q Consensus        62 l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------------------~-----~~~~~~e~~~l~~l~h~~i  115 (264)
                      .+.||+|++|.||+|.+.+|+.||+|+++.....                     .     ...+..|.+.+.++.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            4678999999999999778999999999865211                     0     1123578999999999987


Q ss_pred             cccceeeEeCCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceeeccCCCCeeeCCCCC
Q 024659          116 ANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVN  194 (264)
Q Consensus       116 ~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~-~~~i~H~dl~~~Nil~~~~~~  194 (264)
                      .....+...  ..++||||++++++.....  ....++......++.|++.++.++|+ . |++||||||+||+++ ++.
T Consensus        82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l--~~~~~~~~~~~~i~~~l~~~l~~lH~~~-givHrDlkP~NIll~-~~~  155 (190)
T cd05145          82 PVPEPILLK--KNVLVMEFIGDDGSPAPRL--KDVPLEEEEAEELYEQVVEQMRRLYQEA-GLVHGDLSEYNILYH-DGK  155 (190)
T ss_pred             CCceEEEec--CCEEEEEEecCCCchhhhh--hhccCCHHHHHHHHHHHHHHHHHHHHhC-CEecCCCChhhEEEE-CCC
Confidence            655554433  3489999998875543321  23457778899999999999999999 8 999999999999999 889


Q ss_pred             eEEcccCCCcccCC
Q 024659          195 PRLSCFGLMKNSRD  208 (264)
Q Consensus       195 ~kl~dfg~~~~~~~  208 (264)
                      ++|+|||++.....
T Consensus       156 ~~liDFG~a~~~~~  169 (190)
T cd05145         156 PYIIDVSQAVELDH  169 (190)
T ss_pred             EEEEEcccceecCC
Confidence            99999999986544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.89  E-value=2.8e-23  Score=160.28  Aligned_cols=107  Identities=20%  Similarity=0.153  Sum_probs=94.7

Q ss_pred             CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCccccccc
Q 024659          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA  217 (264)
Q Consensus       138 ~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  217 (264)
                      |+|.+++.. .+..+++.+++.++.|++.||.|||+. +      ||+||+++.++.+++  ||++....... ..+++.
T Consensus         1 GsL~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~-~------kp~Nil~~~~~~~~~--fG~~~~~~~~~-~~g~~~   69 (176)
T smart00750        1 VSLADILEV-RGRPLNEEEIWAVCLQCLRALRELHRQ-A------KSGNILLTWDGLLKL--DGSVAFKTPEQ-SRVDPY   69 (176)
T ss_pred             CcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhc-C------CcccEeEcCccceee--ccceEeecccc-CCCccc
Confidence            589998864 356799999999999999999999999 6      999999999999999  99987654433 367899


Q ss_pred             ccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       218 y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      |+|||++.+..++.++|||||||++|||++|+.||...
T Consensus        70 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~  107 (176)
T smart00750       70 FMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEE  107 (176)
T ss_pred             ccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCcccc
Confidence            99999999999999999999999999999999998643

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.87  E-value=5.4e-22  Score=182.36  Aligned_cols=190  Identities=17%  Similarity=0.115  Sum_probs=153.0

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC---CCCccccceeeEeCCcceEEEe
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR---NRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      ..+.|-+++|+|+||+||+|...+|+.||+|.-.+.+.-+.   .--.+++.+|+   -+.|..+...+.-.+.-++|++
T Consensus       698 ~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEf---YI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~e  774 (974)
T KOG1166|consen  698 EKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEF---YICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSE  774 (974)
T ss_pred             eeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceee---eehHHHHHhhchhhhcchHHHHHHHccCCcceeeee
Confidence            34667778999999999999987899999999887653321   11123333343   3455666666666777889999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeC-------CCCCeEEcccCCCccc
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-------DDVNPRLSCFGLMKNS  206 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~-------~~~~~kl~dfg~~~~~  206 (264)
                      |.+.|||.++++  ..+.+++..+..++.|+++.+.+||.. +|||+||||+|.+|.       +...++|+|||.+-.+
T Consensus       775 y~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~-~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm  851 (974)
T KOG1166|consen  775 YSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAM-GIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDM  851 (974)
T ss_pred             ccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhc-ceecccCCcceeEeecccCCCCcccceEEEecccceee
Confidence            999999999997  667899999999999999999999999 999999999999993       2356999999987543


Q ss_pred             ---CCCCc---ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCC
Q 024659          207 ---RDGRS---YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP  252 (264)
Q Consensus       207 ---~~~~~---~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~  252 (264)
                         .+...   ..+|-.+-.+|+..+..|++++|.|.|+.+++.|+.|+..-
T Consensus       852 ~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q  903 (974)
T KOG1166|consen  852 KLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME  903 (974)
T ss_pred             eEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH
Confidence               33322   24577889999999999999999999999999999998654

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.86  E-value=3.1e-21  Score=149.65  Aligned_cols=179  Identities=15%  Similarity=0.094  Sum_probs=132.9

Q ss_pred             cccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhH----HHHHHHHHHHhcCC-CCCccccceeeEeCCcceEEEecCC
Q 024659           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA----RQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        62 l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      ...|+.|.||+||.+.. .+..++.+.+....+-..    ..+.+|+++|++|. ++++.+++++    +..+++|+|+.
T Consensus         7 ~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~   81 (218)
T PRK12274          7 NEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLA   81 (218)
T ss_pred             ceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeec
Confidence            34569999999997766 556888777776554211    24789999999996 5788888886    34689999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecc-CCCCeeeCCCCCeEEcccCCCcccCCCCcc---
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL-NAYRIVFDDDVNPRLSCFGLMKNSRDGRSY---  212 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl-~~~Nil~~~~~~~kl~dfg~~~~~~~~~~~---  212 (264)
                      |.+|.+.+.   .      ....+..|++.+|.++|+. |++|||| ||+||+++.++.++|+|||++.........   
T Consensus        82 G~~L~~~~~---~------~~~~~~~qi~~~L~~lH~~-GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~  151 (218)
T PRK12274         82 GAAMYQRPP---R------GDLAYFRAARRLLQQLHRC-GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRL  151 (218)
T ss_pred             CccHHhhhh---h------hhHHHHHHHHHHHHHHHHC-cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHH
Confidence            999875431   1      1135778999999999999 9999999 799999999999999999999854433210   


Q ss_pred             --------------cccccccccccccCC-CCC-CccceechHHHHHHHHhCCCCCCCC
Q 024659          213 --------------STNLAFTPPEYLRTG-RVT-PESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       213 --------------~~~~~y~aPE~~~~~-~~~-~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                                    ..++.|++|+...-- ..+ ...+.++.|.-+|.++|+..++.++
T Consensus       152 L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~  210 (218)
T PRK12274        152 LAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED  210 (218)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence                          113444555433221 233 4578889999999999999887654

>PRK10345 hypothetical protein; Provisional

Probab=99.86  E-value=5.3e-21  Score=150.57  Aligned_cols=134  Identities=16%  Similarity=0.164  Sum_probs=104.2

Q ss_pred             ccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcC-----CCCCccccceeeEeCC---c-ceEEEe
Q 024659           63 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-----RNRRLANLLGCCCEGD---E-RLLVAE  133 (264)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-----~h~~i~~~~~~~~~~~---~-~~lv~e  133 (264)
                      ..||+|+||.||. ...++.. ++|++........+.+.+|+.+++.+     +||||+++++++.++.   . +.+|+|
T Consensus         8 ~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e   85 (210)
T PRK10345          8 SPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIAD   85 (210)
T ss_pred             ceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEec
Confidence            3569999999996 2223433 79988876545567799999999999     5799999999998863   3 337899


Q ss_pred             c--CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHH-HHHhcCCCceeeccCCCCeeeCC----CCCeEEcc-cCCCc
Q 024659          134 Y--MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEAL-EYCTSKERALYHDLNAYRIVFDD----DVNPRLSC-FGLMK  204 (264)
Q Consensus       134 ~--~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l-~~lh~~~~i~H~dl~~~Nil~~~----~~~~kl~d-fg~~~  204 (264)
                      |  +.+++|.+++.+   ..+++.  ..++.|++.++ .|||++ +|+||||||+||+++.    +..++|+| ||...
T Consensus        86 ~~G~~~~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~-~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~  158 (210)
T PRK10345         86 FDGKPSITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDN-RIVTMELKPQNILCQRISESEVIPVVCDNIGEST  158 (210)
T ss_pred             CCCCcchhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEeccCCCCCcEEEEECCCCcc
Confidence            9  557999999964   235554  35678888887 999999 9999999999999973    34799999 55443

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.84  E-value=2.7e-22  Score=173.66  Aligned_cols=186  Identities=16%  Similarity=0.159  Sum_probs=158.6

Q ss_pred             CCCCCCCeEEEEEe----CCCCEEEEEEeCCCCChh--HHHHHHHHHHHhcCC-CCCccccceeeEeCCcceEEEecCCC
Q 024659           65 HGEKAPNVVYKGKL----ENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMPN  137 (264)
Q Consensus        65 lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~  137 (264)
                      +|+|+||.|++++.    +.+..+++|..++.....  ......|..++..++ ||.++++...++.+...+++.++..+
T Consensus         2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg   81 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG   81 (612)
T ss_pred             CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence            58999999998763    336778888887643222  124556788888887 99999999999999999999999999


Q ss_pred             CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCccccccc
Q 024659          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA  217 (264)
Q Consensus       138 ~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  217 (264)
                      +.|...+.  ....+++.....+...++-++.++|+. +++|+|+|++||+++.+|.+++.|||+.+..-.....+||..
T Consensus        82 g~lft~l~--~~~~f~~~~~~~~~aelaLald~lh~l-~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~e  158 (612)
T KOG0603|consen   82 GDLFTRLS--KEVMFDELDVAFYLAELALALDHLHKL-GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYE  158 (612)
T ss_pred             chhhhccc--cCCchHHHHHHHHHHHHHHHHhhcchh-HHHHhcccccceeecccCccccCCchhhhHhHhhhhcccchh
Confidence            88887765  445677788888999999999999999 999999999999999999999999999987766666699999


Q ss_pred             ccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       218 y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      |||||++.  ......|.||||++.+||++|-.||..+
T Consensus       159 ymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~  194 (612)
T KOG0603|consen  159 YRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGD  194 (612)
T ss_pred             hhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchH
Confidence            99999998  6677899999999999999999999873

>smart00090 RIO RIO-like kinase

Probab=99.84  E-value=2.7e-20  Score=149.84  Aligned_cols=143  Identities=15%  Similarity=0.087  Sum_probs=110.1

Q ss_pred             cccccccCCCCCCCeEEEEE--eCCCCEEEEEEeCCCCChh------------------------HHHHHHHHHHHhcCC
Q 024659           58 MENIVSEHGEKAPNVVYKGK--LENQFRIAVKRFNRSAWPD------------------------ARQFLEEARAVGQLR  111 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~~------------------------~~~~~~e~~~l~~l~  111 (264)
                      .|.+.+.||+|++|.||+|.  ..+|+.||+|.++......                        ...+..|++.+.++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            46677888999999999998  5678999999997543110                        122567999999997


Q ss_pred             CCC--ccccceeeEeCCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-ceeeccCCCCee
Q 024659          112 NRR--LANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER-ALYHDLNAYRIV  188 (264)
Q Consensus       112 h~~--i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~-i~H~dl~~~Nil  188 (264)
                      +.+  +.++++.    ...++||||+++.+|.....  ....+.......++.|++.++.+||+. | ++|+||||+||+
T Consensus       109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~-g~iiH~Dikp~NIl  181 (237)
T smart00090      109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRL--KDVEPEEEEEFELYDDILEEMRKLYKE-GELVHGDLSEYNIL  181 (237)
T ss_pred             hcCCCCCeeeEe----cCceEEEEEecCCccccccc--ccCCcchHHHHHHHHHHHHHHHHHHhc-CCEEeCCCChhhEE
Confidence            533  3333332    23589999999988766542  233455666789999999999999999 9 999999999999


Q ss_pred             eCCCCCeEEcccCCCcccCC
Q 024659          189 FDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       189 ~~~~~~~kl~dfg~~~~~~~  208 (264)
                      ++ ++.++|+|||.+.....
T Consensus       182 i~-~~~i~LiDFg~a~~~~~  200 (237)
T smart00090      182 VH-DGKVVIIDVSQSVELDH  200 (237)
T ss_pred             EE-CCCEEEEEChhhhccCC
Confidence            99 88999999999875444

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.83  E-value=7.7e-20  Score=145.26  Aligned_cols=136  Identities=16%  Similarity=0.179  Sum_probs=112.8

Q ss_pred             ccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCCh--h------HHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           63 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--D------ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      +.||+|++|.||+|.. .+..+++|........  .      ...+.+|++++..+.|+++.....++...+..+++|||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            4679999999999987 4457888876543211  1      23477899999999999988888887777888999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      ++|++|.+++...     .. ....++.+++.+|.++|+. +++|+|++|.||+++ ++.++|+|||.+....
T Consensus        81 ~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~-~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~~  145 (211)
T PRK14879         81 IEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSA-GIIHGDLTTSNMILS-GGKIYLIDFGLAEFSK  145 (211)
T ss_pred             eCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhC-CcccCCCCcccEEEE-CCCEEEEECCcccCCC
Confidence            9999999988531     12 7788999999999999999 999999999999999 7899999999987643

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.83  E-value=2.2e-21  Score=174.30  Aligned_cols=187  Identities=16%  Similarity=0.119  Sum_probs=147.5

Q ss_pred             ccCCCCCCCeEEEEE-eCCCCEEEEEEeC----CCC-Chh-HHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           63 SEHGEKAPNVVYKGK-LENQFRIAVKRFN----RSA-WPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        63 ~~lg~G~~g~Vy~~~-~~~~~~vavK~~~----~~~-~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      ..+|.|++|.|+... ....+.++.|.+.    ... ... ...+..|+.+-..+.|+|++..+..+.+.....-.||||
T Consensus       324 ~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~  403 (601)
T KOG0590|consen  324 RVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEYC  403 (601)
T ss_pred             ceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhhcc
Confidence            345899999777776 3344445554433    111 111 112556777888889999988888877665555569999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC------
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------  209 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~------  209 (264)
                      ++ +|..++.+  ...++...+-.+++|++.|++|+|+. |+.|||+|++|+++..+|.+||+|||.+.....+      
T Consensus       404 ~~-Dlf~~~~~--~~~~~~~e~~c~fKqL~~Gv~y~h~~-GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~  479 (601)
T KOG0590|consen  404 PY-DLFSLVMS--NGKLTPLEADCFFKQLLRGVKYLHSM-GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIH  479 (601)
T ss_pred             cH-HHHHHHhc--ccccchhhhhHHHHHHHHHHHHHHhc-CceeccCccccEEEecCCceEEeecCcceeeccCcchhhh
Confidence            99 89998863  23677888889999999999999999 9999999999999999999999999998765432      


Q ss_pred             --CcccccccccccccccCCCCCC-ccceechHHHHHHHHhCCCCCC
Q 024659          210 --RSYSTNLAFTPPEYLRTGRVTP-ESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~~~~~~~~-~~DiwslG~~l~el~~g~~~~~  253 (264)
                        ....|+..|+|||.+.+..|.+ ..||||.|+++..|++|+.|+.
T Consensus       480 ~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk  526 (601)
T KOG0590|consen  480 ESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWK  526 (601)
T ss_pred             hhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccc
Confidence              2346788899999999999987 6999999999999999998874

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.81  E-value=3.4e-19  Score=140.25  Aligned_cols=131  Identities=19%  Similarity=0.236  Sum_probs=106.4

Q ss_pred             CCCCCCCeEEEEEeCCCCEEEEEEeCCCCC--h------hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           65 HGEKAPNVVYKGKLENQFRIAVKRFNRSAW--P------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        65 lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      ||+|+||.||++.+. +..+++|.......  .      ...++.+|++++..++|+++.....++...+..+++|||++
T Consensus         2 ig~G~~~~vy~~~~~-~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~   80 (199)
T TIGR03724         2 IAKGAEAIIYLGDFL-GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE   80 (199)
T ss_pred             CCCCceEEEEEeecC-CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence            699999999999954 46788888654221  1      12456789999999998887666666667777899999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      +++|.+++....   .      .++.+++.+|.++|+. +++|+|++|.||+++ ++.++++|||++....
T Consensus        81 g~~l~~~~~~~~---~------~~~~~i~~~l~~lH~~-gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~~  140 (199)
T TIGR03724        81 GKPLKDVIEEGN---D------ELLREIGRLVGKLHKA-GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYSD  140 (199)
T ss_pred             CccHHHHHhhcH---H------HHHHHHHHHHHHHHHC-CeecCCCCcceEEEE-CCcEEEEECCCCcCCC
Confidence            999998874211   0      7899999999999999 999999999999999 8999999999987643

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.81  E-value=1.1e-20  Score=172.20  Aligned_cols=190  Identities=16%  Similarity=0.181  Sum_probs=147.7

Q ss_pred             cccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCC-ChhHHHHHHHHHHH--hcCCCCCccccceeeEeCCcceEEEec
Q 024659           58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSA-WPDARQFLEEARAV--GQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l--~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      ++...+.||.+.|=+|.+++++.| .|++|++-+.. .-..+.+.++++-+  ...++||.+++.-+.......|||-+|
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG-~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy  102 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREG-LVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY  102 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCc-eEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence            455667789999999999998888 48999987654 23344555544443  344899999998887777788999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCcc--
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--  212 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~~--  212 (264)
                      +.+ +|+|.+.  .+..+.....+.|+.|++.|+..+|.. |++|||||.+||||....=+.|+||..-+....+...  
T Consensus       103 vkh-nLyDRlS--TRPFL~~iEKkWiaFQLL~al~qcH~~-gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPa  178 (1431)
T KOG1240|consen  103 VKH-NLYDRLS--TRPFLVLIEKKWIAFQLLKALSQCHKL-GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPA  178 (1431)
T ss_pred             Hhh-hhhhhhc--cchHHHHHHHHHHHHHHHHHHHHHHHc-CccccccccceEEEeeechhhhhcccccCCccCCCCCcc
Confidence            966 7999985  444456778888999999999999999 9999999999999999888999999876543222111  


Q ss_pred             ---------cccccccccccccCC----------C-CCCccceechHHHHHHHHhC-CCCC
Q 024659          213 ---------STNLAFTPPEYLRTG----------R-VTPESVMYSFGTLLLDLLSG-KHIP  252 (264)
Q Consensus       213 ---------~~~~~y~aPE~~~~~----------~-~~~~~DiwslG~~l~el~~g-~~~~  252 (264)
                               ..-..|.|||-+-..          . .+++.||||+||+++|+++- ++||
T Consensus       179 df~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF  239 (1431)
T KOG1240|consen  179 DFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLF  239 (1431)
T ss_pred             cceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcc
Confidence                     123569999977431          2 67899999999999999775 6666

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.80  E-value=5.9e-19  Score=138.86  Aligned_cols=137  Identities=17%  Similarity=0.127  Sum_probs=106.6

Q ss_pred             ccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCCh----------------------hHHHHHHHHHHHhcCCCCC--
Q 024659           59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP----------------------DARQFLEEARAVGQLRNRR--  114 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~e~~~l~~l~h~~--  114 (264)
                      +.+.+.||.|+||.||++...+++.||+|+++.....                      ....+..|+..+.++.+++  
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~   96 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP   96 (198)
T ss_pred             hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence            5566778999999999999878999999987653210                      0112567888888887764  


Q ss_pred             ccccceeeEeCCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCC
Q 024659          115 LANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN  194 (264)
Q Consensus       115 i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~  194 (264)
                      +...++    ....+++|||+++++|.....        ......++.+++.++.++|+. +++|+||+|+||++++++.
T Consensus        97 v~~~~~----~~~~~lv~e~~~g~~L~~~~~--------~~~~~~~~~~i~~~l~~lh~~-gi~H~Dl~p~Nill~~~~~  163 (198)
T cd05144          97 VPKPID----WNRHAVVMEYIDGVELYRVRV--------LEDPEEVLDEILEEIVKAYKH-GIIHGDLSEFNILVDDDEK  163 (198)
T ss_pred             CCceee----cCCceEEEEEeCCcchhhccc--------cccHHHHHHHHHHHHHHHHHC-CCCcCCCCcccEEEcCCCc
Confidence            333333    234589999999998876542        034567889999999999999 9999999999999999999


Q ss_pred             eEEcccCCCcccCC
Q 024659          195 PRLSCFGLMKNSRD  208 (264)
Q Consensus       195 ~kl~dfg~~~~~~~  208 (264)
                      ++|+|||++.....
T Consensus       164 ~~liDfg~~~~~~~  177 (198)
T cd05144         164 IYIIDWPQMVSTDH  177 (198)
T ss_pred             EEEEECCccccCCC
Confidence            99999999865444

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.80  E-value=7.2e-19  Score=157.97  Aligned_cols=136  Identities=18%  Similarity=0.152  Sum_probs=109.6

Q ss_pred             ccccCCCCCCCeEEEEEeCCCCEEEEEEeCCC-CC------hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRS-AW------PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        61 ~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      ..+.||+|+||.||++.+.+...++.+.+... ..      ...+++.+|+++++.++|++++....++......++|||
T Consensus       337 ~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E  416 (535)
T PRK09605        337 PDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVME  416 (535)
T ss_pred             ccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEE
Confidence            45667999999999998766544433333221 11      113457899999999999999888877777778899999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      |+++++|.+++.          ....++.+++.+|.+||+. +++||||||+||++ .++.++|+|||+++....
T Consensus       417 ~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~-giiHrDlkp~NILl-~~~~~~liDFGla~~~~~  479 (535)
T PRK09605        417 YIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKA-GIVHGDLTTSNFIV-RDDRLYLIDFGLGKYSDL  479 (535)
T ss_pred             ecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhC-CCccCCCChHHEEE-ECCcEEEEeCcccccCCc
Confidence            999999998874          3567899999999999999 99999999999999 678999999999986543

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.77  E-value=2e-19  Score=146.48  Aligned_cols=193  Identities=20%  Similarity=0.181  Sum_probs=125.6

Q ss_pred             cccCCCCCCCeEEEEEeCC-CCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCC----------CCccccceeeEe---
Q 024659           62 VSEHGEKAPNVVYKGKLEN-QFRIAVKRFNRSA---WPDARQFLEEARAVGQLRN----------RRLANLLGCCCE---  124 (264)
Q Consensus        62 l~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h----------~~i~~~~~~~~~---  124 (264)
                      -+.||.|.++.||.+++.. ++.+|+|.+....   ....+.+.+|.-....+.+          -.++..++...-   
T Consensus        17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~   96 (288)
T PF14531_consen   17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGK   96 (288)
T ss_dssp             EEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS
T ss_pred             ccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCC
Confidence            3457999999999999754 8999999986443   2234566666655555432          123333333221   


Q ss_pred             ------CC--------cceEEEecCCCCCHHHhhhc---CCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCC
Q 024659          125 ------GD--------ERLLVAEYMPNDTLAKHLFH---WET--QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY  185 (264)
Q Consensus       125 ------~~--------~~~lv~e~~~~~sL~~~l~~---~~~--~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~  185 (264)
                            ..        +.+++|+-+ .++|.+++..   ...  .......+..+..|+++.+++||.. |++|+||+|+
T Consensus        97 ~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~-GlVHgdi~~~  174 (288)
T PF14531_consen   97 PPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY-GLVHGDIKPE  174 (288)
T ss_dssp             -SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT-TEEEST-SGG
T ss_pred             CcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc-ceEeccccee
Confidence                  11        236677766 4578877541   111  1233455667789999999999999 9999999999


Q ss_pred             CeeeCCCCCeEEcccCCCcccCCCCc-ccccccccccccccCC--------CCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          186 RIVFDDDVNPRLSCFGLMKNSRDGRS-YSTNLAFTPPEYLRTG--------RVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       186 Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~~~~y~aPE~~~~~--------~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      |++++.+|.++|+||+.......... ...+..|.+||.....        .++.+.|.|+||+++|.|.++..||....
T Consensus       175 nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~  254 (288)
T PF14531_consen  175 NFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSS  254 (288)
T ss_dssp             GEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCG
T ss_pred             eEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCC
Confidence            99999999999999987665433222 3445778999977432        37889999999999999999999986443

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.76  E-value=4.2e-18  Score=127.52  Aligned_cols=135  Identities=15%  Similarity=0.037  Sum_probs=111.6

Q ss_pred             ccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCC--CCccccceeeEeCCcceEEEecCCCC
Q 024659           61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN--RRLANLLGCCCEGDERLLVAEYMPND  138 (264)
Q Consensus        61 ~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e~~~~~  138 (264)
                      +++.+|.|.++.||++...+ ..+++|.......  ...+.+|+..++.+++  .++.+++......+..++++||+++.
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~   78 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE   78 (155)
T ss_pred             cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence            35678999999999999766 5889999876543  4568889999999976  48888888887777899999999887


Q ss_pred             CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC--CCceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK--ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       139 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~--~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      ++..+         +......++.+++.++..+|..  .+++|+|++|.||++++.+.++++|||.+....
T Consensus        79 ~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~  140 (155)
T cd05120          79 TLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGP  140 (155)
T ss_pred             ecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCCC
Confidence            66543         4566778899999999999985  169999999999999998999999999886533

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.75  E-value=1.4e-17  Score=129.68  Aligned_cols=137  Identities=16%  Similarity=0.118  Sum_probs=97.1

Q ss_pred             cccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChh--HHH----------------------HHHHHHHHhcCCCCC--c
Q 024659           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD--ARQ----------------------FLEEARAVGQLRNRR--L  115 (264)
Q Consensus        62 l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~----------------------~~~e~~~l~~l~h~~--i  115 (264)
                      .+.||+|+||.||++.+.+++.||+|+++......  ...                      ...|.+.+.++.+.+  +
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            35689999999999998788999999987543211  111                      134555565554433  3


Q ss_pred             cccceeeEeCCcceEEEecCCCCCHHH-hhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceeeccCCCCeeeCCCC
Q 024659          116 ANLLGCCCEGDERLLVAEYMPNDTLAK-HLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDV  193 (264)
Q Consensus       116 ~~~~~~~~~~~~~~lv~e~~~~~sL~~-~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~-~~~i~H~dl~~~Nil~~~~~  193 (264)
                      .+.++.    ...+++|||++++++.. .+.. .  ... ..+..++.+++.++.++|. . +++|+||+|+||+++ ++
T Consensus        82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~-~--~~~-~~~~~~~~~~~~~l~~lh~~~-~ivH~Dl~p~Nili~-~~  151 (187)
T cd05119          82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKD-V--RLL-EDPEELYDQILELMRKLYREA-GLVHGDLSEYNILVD-DG  151 (187)
T ss_pred             CceEec----CCCEEEEEEeCCCCccChhhhh-h--hhc-ccHHHHHHHHHHHHHHHhhcc-CcCcCCCChhhEEEE-CC
Confidence            333332    24689999999854321 1111 0  011 5678899999999999999 7 999999999999999 89


Q ss_pred             CeEEcccCCCcccCC
Q 024659          194 NPRLSCFGLMKNSRD  208 (264)
Q Consensus       194 ~~kl~dfg~~~~~~~  208 (264)
                      .++++|||.+.....
T Consensus       152 ~~~liDfg~a~~~~~  166 (187)
T cd05119         152 KVYIIDVPQAVEIDH  166 (187)
T ss_pred             cEEEEECcccccccC
Confidence            999999999865443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.73  E-value=1.1e-17  Score=144.64  Aligned_cols=151  Identities=22%  Similarity=0.321  Sum_probs=127.9

Q ss_pred             HhcCCCCCccccceeeEeCCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCC
Q 024659          107 VGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR  186 (264)
Q Consensus       107 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~N  186 (264)
                      |+.+.|.|+.+++|.+.++...+.|.+||..|+|.+.+.. ....+++.....++++|+.||.|+|.-.-..|+.+++.|
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n   79 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN   79 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence            4678999999999999999999999999999999999975 567788889999999999999999987233899999999


Q ss_pred             eeeCCCCCeEEcccCCCcccCC------CCcccccccccccccccCCC-------CCCccceechHHHHHHHHhCCCCCC
Q 024659          187 IVFDDDVNPRLSCFGLMKNSRD------GRSYSTNLAFTPPEYLRTGR-------VTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       187 il~~~~~~~kl~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~-------~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                      .++|....+|++|||+......      .........|.|||.+....       .+.+.|+||||++++|+++.+.||.
T Consensus        80 Clvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~  159 (484)
T KOG1023|consen   80 CLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFD  159 (484)
T ss_pred             ceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccc
Confidence            9999999999999999776532      11112346799999997642       4667999999999999999999998


Q ss_pred             CCccc
Q 024659          254 SHVSS  258 (264)
Q Consensus       254 ~~~~~  258 (264)
                      .....
T Consensus       160 ~~~~~  164 (484)
T KOG1023|consen  160 LRNLV  164 (484)
T ss_pred             ccccc
Confidence            64443

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.72  E-value=1.1e-16  Score=129.23  Aligned_cols=134  Identities=16%  Similarity=0.135  Sum_probs=101.1

Q ss_pred             CC-CCCCCeEEEEEeCCCCEEEEEEeCCCC-------------ChhHHHHHHHHHHHhcCCCCCc--cccceeeEeCCc-
Q 024659           65 HG-EKAPNVVYKGKLENQFRIAVKRFNRSA-------------WPDARQFLEEARAVGQLRNRRL--ANLLGCCCEGDE-  127 (264)
Q Consensus        65 lg-~G~~g~Vy~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~e~~~l~~l~h~~i--~~~~~~~~~~~~-  127 (264)
                      +| .|+.|+||.+... +..+++|.+....             ......+.+|++++.+++|+++  +..+++...... 
T Consensus        39 lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~  117 (239)
T PRK01723         39 VGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGL  117 (239)
T ss_pred             eecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCc
Confidence            35 6777788888875 4578888875321             1123457889999999998875  566665433222 


Q ss_pred             ---ceEEEecCCC-CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCC
Q 024659          128 ---RLLVAEYMPN-DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (264)
Q Consensus       128 ---~~lv~e~~~~-~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~  203 (264)
                         .++|+|++++ .+|.+++..   ..++..    .+.+++.++.+||+. ||+|+||||.||+++.++.++|+|||.+
T Consensus       118 ~~~~~lV~e~l~G~~~L~~~l~~---~~l~~~----~~~~i~~~l~~lH~~-GI~HrDlkp~NILv~~~~~v~LIDfg~~  189 (239)
T PRK01723        118 FYRADILIERIEGARDLVALLQE---APLSEE----QWQAIGQLIARFHDA-GVYHADLNAHNILLDPDGKFWLIDFDRG  189 (239)
T ss_pred             ceeeeEEEEecCCCCCHHHHHhc---CCCCHH----HHHHHHHHHHHHHHC-CCCCCCCCchhEEEcCCCCEEEEECCCc
Confidence               2599999997 689888743   345543    357899999999999 9999999999999998889999999998


Q ss_pred             cccC
Q 024659          204 KNSR  207 (264)
Q Consensus       204 ~~~~  207 (264)
                      ....
T Consensus       190 ~~~~  193 (239)
T PRK01723        190 ELRT  193 (239)
T ss_pred             ccCC
Confidence            7644

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.70  E-value=5.3e-18  Score=144.56  Aligned_cols=117  Identities=24%  Similarity=0.377  Sum_probs=103.3

Q ss_pred             cceEEEecCCCCCHHHhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcc
Q 024659          127 ERLLVAEYMPNDTLAKHLFHW-ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (264)
Q Consensus       127 ~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~  205 (264)
                      .++|.|++|...+|.+++++. .....++...+.++.|++.|+.|   + +.+|+|+||.||++..+..+||.|||+...
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k-~~ihrdlkp~nif~~~d~q~kIgDFgl~ts  405 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K-GLIHRDLKPSNIFFSDDDQLKIGDFGLVTS  405 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c-cchhhhccccccccccchhhhhhhhhheee
Confidence            478999999999999999743 34566788899999999999999   6 999999999999999999999999999876


Q ss_pred             cCCCC----------cccccccccccccccCCCCCCccceechHHHHHHHHh
Q 024659          206 SRDGR----------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS  247 (264)
Q Consensus       206 ~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~  247 (264)
                      .....          ...+|..||+||.+.++.|+.++||||||++|+|++.
T Consensus       406 ~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~  457 (516)
T KOG1033|consen  406 QDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI  457 (516)
T ss_pred             cccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence            54332          3467899999999999999999999999999999987

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.69  E-value=5.6e-17  Score=134.16  Aligned_cols=139  Identities=15%  Similarity=0.198  Sum_probs=108.6

Q ss_pred             CCCCccccceeeEeC---------------------------CcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHH
Q 024659          111 RNRRLANLLGCCCEG---------------------------DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALH  163 (264)
Q Consensus       111 ~h~~i~~~~~~~~~~---------------------------~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~q  163 (264)
                      +||||+++.+.|.+.                           ..+|+||..++. +|..++.   .+..+.....-++.|
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~---~~~~s~r~~~~~laQ  349 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLW---TRHRSYRTGRVILAQ  349 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHh---cCCCchHHHHHHHHH
Confidence            599999999887432                           236899988855 7999985   334556677789999


Q ss_pred             HHHHHHHHhcCCCceeeccCCCCeeeC--CC--CCeEEcccCCCcccCC----------CCcccccccccccccccCCC-
Q 024659          164 IAEALEYCTSKERALYHDLNAYRIVFD--DD--VNPRLSCFGLMKNSRD----------GRSYSTNLAFTPPEYLRTGR-  228 (264)
Q Consensus       164 i~~~l~~lh~~~~i~H~dl~~~Nil~~--~~--~~~kl~dfg~~~~~~~----------~~~~~~~~~y~aPE~~~~~~-  228 (264)
                      ++.|+.|||.+ |+.|||+|++||++.  ++  -.+.|+|||.+--.+.          .....|....||||+....+ 
T Consensus       350 lLEav~hL~~h-gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PG  428 (598)
T KOG4158|consen  350 LLEAVTHLHKH-GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPG  428 (598)
T ss_pred             HHHHHHHHHHc-cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCC
Confidence            99999999999 999999999999994  33  3489999998643222          12334567789999885322 


Q ss_pred             ----CC-CccceechHHHHHHHHhCCCCCCC
Q 024659          229 ----VT-PESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       229 ----~~-~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                          .+ .++|.|+.|.+.||++....||+.
T Consensus       429 p~avvny~kAD~WA~GalaYEIfg~~NPFY~  459 (598)
T KOG4158|consen  429 PNAVVNYEKADTWAAGALAYEIFGRSNPFYK  459 (598)
T ss_pred             CceeeccchhhhhhhhhhHHHHhccCCcccc
Confidence                23 489999999999999999999987

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.69  E-value=2.3e-17  Score=150.42  Aligned_cols=162  Identities=17%  Similarity=0.176  Sum_probs=116.3

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      ++++.|+.+..|++|.||.+++. ..+++|+ ++++.+    .-+++   ++.....|.++                   
T Consensus        83 ~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~----lilRn---ilt~a~npfvv-------------------  135 (1205)
T KOG0606|consen   83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQN----LILRN---ILTFAGNPFVV-------------------  135 (1205)
T ss_pred             cccceeEeeccCCCCceeeeeccccccchhh-cccccc----hhhhc---cccccCCccee-------------------
Confidence            34567788899999999999865 4668888 454332    00111   11112222222                   


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC-------
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-------  208 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~-------  208 (264)
                        |+=...++  ....++..        ++.+++|+|+. +|+|||+||+|.+|..-|.+|+.|||+.+....       
T Consensus       136 --gDc~tllk--~~g~lPvd--------mvla~Eylh~y-givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~  202 (1205)
T KOG0606|consen  136 --GDCATLLK--NIGPLPVD--------MVLAVEYLHSY-GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLK  202 (1205)
T ss_pred             --chhhhhcc--cCCCCcch--------hhHHhHhhccC-CeecCCCCCCcceeeecccccccchhhhhhhhhhccchhh
Confidence              22233332  11233322        27889999999 999999999999999999999999999764211       


Q ss_pred             ------------CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCccc
Q 024659          209 ------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS  258 (264)
Q Consensus       209 ------------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~~  258 (264)
                                  .....+|+.|+|||++..+.|...+|+|++|+++||.+-|..||..+..+
T Consensus       203 eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpe  264 (1205)
T KOG0606|consen  203 EGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE  264 (1205)
T ss_pred             hcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHH
Confidence                        12236899999999999999999999999999999999999999988433

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.62  E-value=1e-16  Score=144.39  Aligned_cols=197  Identities=14%  Similarity=0.161  Sum_probs=158.5

Q ss_pred             ccccccccCCCCCCCeEEEEEeC--CCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCC-CCCccccceeeEeCCcceEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE--NQFRIAVKRFNRSA--WPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv  131 (264)
                      ..|.+++.||+|+|+.|-.....  ....+|.|.+....  ....+....|..+-+.+. |.|++.+++...+....+++
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~   99 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS   99 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence            44667777899999999887753  35566777766543  233445666777777776 99999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCceeeccCCCCeeeCCCC-CeEEcccCCCcccCC-
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT-SKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRD-  208 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh-~~~~i~H~dl~~~Nil~~~~~-~~kl~dfg~~~~~~~-  208 (264)
                      .+|..++++.+.+........+......++.|+..++.|+| .. ++.|+|++|+|.+++..+ .+++.|||+|..... 
T Consensus       100 ~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~-~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~  178 (601)
T KOG0590|consen  100 LSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN-GVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK  178 (601)
T ss_pred             cCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc-ccccCCCCCccchhccCCCcccCCCchhhcccccc
Confidence            99999999988773212225666677889999999999999 77 999999999999999999 999999999987655 


Q ss_pred             C------Ccccc-cccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCC
Q 024659          209 G------RSYST-NLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       209 ~------~~~~~-~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      .      ....+ ++.|+|||...+.. ..+..|+||.|+++..+++|..|...
T Consensus       179 ~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~  232 (601)
T KOG0590|consen  179 NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDF  232 (601)
T ss_pred             CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccc
Confidence            2      12356 89999999998854 57789999999999999999987643

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.62  E-value=3.1e-15  Score=130.70  Aligned_cols=141  Identities=17%  Similarity=0.141  Sum_probs=97.8

Q ss_pred             ccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHH----------------------------------------HHHH
Q 024659           63 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDAR----------------------------------------QFLE  102 (264)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~----------------------------------------~~~~  102 (264)
                      +.||.|++|.||+|++.+|+.||||+.++.-.....                                        ++.+
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~  202 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR  202 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence            357999999999999999999999998764211110                                        1334


Q ss_pred             HHHHHhcC----CCCCccccceeeE-eCCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHH-HHHHHhcCCC
Q 024659          103 EARAVGQL----RNRRLANLLGCCC-EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE-ALEYCTSKER  176 (264)
Q Consensus       103 e~~~l~~l----~h~~i~~~~~~~~-~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~-~l~~lh~~~~  176 (264)
                      |++.+.++    ++.+-+.+-.++. .....++||||++|.+|.++... ......   ...++.+++. .+..+|.. |
T Consensus       203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~-~~~~~~---~~~ia~~~~~~~l~ql~~~-g  277 (437)
T TIGR01982       203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAAL-DEAGLD---RKALAENLARSFLNQVLRD-G  277 (437)
T ss_pred             HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHH-HhcCCC---HHHHHHHHHHHHHHHHHhC-C
Confidence            55544444    2222222222322 23457899999999999887642 111222   3446666665 46788998 9


Q ss_pred             ceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       177 i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      ++|+|++|.||+++.++.++++|||++.....
T Consensus       278 ~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       278 FFHADLHPGNIFVLKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             ceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence            99999999999999999999999999876543

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.59  E-value=2.5e-14  Score=125.70  Aligned_cols=163  Identities=15%  Similarity=0.139  Sum_probs=128.8

Q ss_pred             eCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCCHHHhhhcCCCCCCCHHHH
Q 024659           78 LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR  157 (264)
Q Consensus        78 ~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~  157 (264)
                      ..++.+|.+...+...........+.+..|+.++||+|++++..+......|+|+|.+.-  |..+++.     +....+
T Consensus        34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~P--l~~~lk~-----l~~~~v  106 (690)
T KOG1243|consen   34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVRP--LETVLKE-----LGKEEV  106 (690)
T ss_pred             eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecccc--HHHHHHH-----hHHHHH
Confidence            566778888888876654455678889999999999999999999999999999998743  7777753     335556


Q ss_pred             HHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc----ccccccccccccccCCCCCCcc
Q 024659          158 LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS----YSTNLAFTPPEYLRTGRVTPES  233 (264)
Q Consensus       158 ~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~----~~~~~~y~aPE~~~~~~~~~~~  233 (264)
                      ...+.||+.||.+||+..+++|+||.-+.|+|++.|..||++|.++........    ...-..|..|+.+....+  ..
T Consensus       107 ~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~~--s~  184 (690)
T KOG1243|consen  107 CLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSEW--SI  184 (690)
T ss_pred             HHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCcccc--ch
Confidence            677899999999999776999999999999999999999999998765433321    111234566665543332  37


Q ss_pred             ceechHHHHHHHHhCC
Q 024659          234 VMYSFGTLLLDLLSGK  249 (264)
Q Consensus       234 DiwslG~~l~el~~g~  249 (264)
                      |.|.||++++|++.|.
T Consensus       185 D~~~Lg~li~el~ng~  200 (690)
T KOG1243|consen  185 DSWGLGCLIEELFNGS  200 (690)
T ss_pred             hhhhHHHHHHHHhCcc
Confidence            9999999999999994

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.53  E-value=7e-14  Score=107.03  Aligned_cols=128  Identities=15%  Similarity=0.073  Sum_probs=94.8

Q ss_pred             cccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCcc-ccceeeEeCCcceEEEecCCCCCH
Q 024659           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLA-NLLGCCCEGDERLLVAEYMPNDTL  140 (264)
Q Consensus        62 l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~sL  140 (264)
                      ++.++.|.++.||++... +..+++|....... ....+.+|+..++.+.+.+++ +++..  .....++||||+++.++
T Consensus         3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~--~~~~~~lv~e~i~G~~l   78 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYF--DPETGVLITEFIEGSEL   78 (170)
T ss_pred             eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEE--eCCCCeEEEEecCCCcc
Confidence            346688999999999866 55899998765432 123456888888888655544 34433  33446899999999877


Q ss_pred             HHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-----ceeeccCCCCeeeCCCCCeEEcccCCCcc
Q 024659          141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER-----ALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (264)
Q Consensus       141 ~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~-----i~H~dl~~~Nil~~~~~~~kl~dfg~~~~  205 (264)
                      ....       .   .......+++.++..||.. +     ++|+|++|.||+++ ++.++++||+.+..
T Consensus        79 ~~~~-------~---~~~~~~~~l~~~l~~LH~~-~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151          79 LTED-------F---SDPENLEKIAKLLKKLHSS-PLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             cccc-------c---cCHHHHHHHHHHHHHHhCC-CCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            5420       1   1134567899999999998 6     49999999999999 66899999998764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.51  E-value=2.4e-14  Score=126.82  Aligned_cols=143  Identities=15%  Similarity=0.103  Sum_probs=92.8

Q ss_pred             CccccccccCCCCCCCeEEEEEeCC-CCEEEEEEeCCCCChh----------------------------------HH--
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLEN-QFRIAVKRFNRSAWPD----------------------------------AR--   98 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~----------------------------------~~--   98 (264)
                      |..+.. +.+|.|++|.||+|++.+ |+.||||+.++.-...                                  .+  
T Consensus       119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l  197 (537)
T PRK04750        119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL  197 (537)
T ss_pred             HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence            444554 578999999999999876 9999999998642110                                  01  


Q ss_pred             ----HHHHHHHHHhcCC----CCCccccceeeEe-CCcceEEEecCCCCCHHHhhhcCCCCCC-----CHHHHHHHHHHH
Q 024659           99 ----QFLEEARAVGQLR----NRRLANLLGCCCE-GDERLLVAEYMPNDTLAKHLFHWETQPM-----KWAMRLRVALHI  164 (264)
Q Consensus        99 ----~~~~e~~~l~~l~----h~~i~~~~~~~~~-~~~~~lv~e~~~~~sL~~~l~~~~~~~~-----~~~~~~~i~~qi  164 (264)
                          ++.+|+..+.++.    +.+.+.+-.++.+ ....+|||||+.|+.+.++..- .....     ....+..++.|+
T Consensus       198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l-~~~g~d~~~la~~~v~~~~~Qi  276 (537)
T PRK04750        198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAAL-RAAGTDMKLLAERGVEVFFTQV  276 (537)
T ss_pred             HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHH-HhcCCCHHHHHHHHHHHHHHHH
Confidence                1333444444442    3333333333322 3456799999999999874321 11222     222233334443


Q ss_pred             HHHHHHHhcCCCceeeccCCCCeeeCCCC----CeEEcccCCCcccCC
Q 024659          165 AEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNSRD  208 (264)
Q Consensus       165 ~~~l~~lh~~~~i~H~dl~~~Nil~~~~~----~~kl~dfg~~~~~~~  208 (264)
                             ... |++|+|++|.||+++.++    .++++|||++.....
T Consensus       277 -------f~~-GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        277 -------FRD-GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             -------HhC-CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence                   456 999999999999999887    999999999876543

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.45  E-value=1.9e-12  Score=97.63  Aligned_cols=133  Identities=18%  Similarity=0.195  Sum_probs=99.9

Q ss_pred             cCCCCCCCeEEEEEeCCCCEEEEEE-eCCCCC-hh------HHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           64 EHGEKAPNVVYKGKLENQFRIAVKR-FNRSAW-PD------ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~~~~vavK~-~~~~~~-~~------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      .+++|+-+.+|.+.+.+.. +++|. +++.-. +.      .++-.+|++++.+++-..|....-+..+++...|+|||+
T Consensus         3 ~i~~GAEa~i~~~~~~g~~-av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I   81 (204)
T COG3642           3 LIKQGAEAIIYLTDFLGLP-AVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI   81 (204)
T ss_pred             hhhCCcceeEEeeeccCcc-eEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence            3578898999999765543 44444 333211 11      134567999999998777766666667788889999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      +|..|.+.+...         ...++..+-.-+.-||.. ||+|+||.++||++..+. +.++|||++.....
T Consensus        82 ~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~-givHGDLTtsNiIl~~~~-i~~IDfGLg~~s~~  143 (204)
T COG3642          82 EGELLKDALEEA---------RPDLLREVGRLVGKLHKA-GIVHGDLTTSNIILSGGR-IYFIDFGLGEFSDE  143 (204)
T ss_pred             CChhHHHHHHhc---------chHHHHHHHHHHHHHHhc-CeecCCCccceEEEeCCc-EEEEECCccccccc
Confidence            999999888632         245667777777889999 999999999999998665 99999999886544

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.42  E-value=3.6e-12  Score=95.81  Aligned_cols=144  Identities=17%  Similarity=0.165  Sum_probs=104.9

Q ss_pred             cccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCCh-------hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP-------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        62 l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      +..+-+|+-+.|+++.+.+...++..++.+.-..       ...+..+|++.|.++.--.|.-..-++.+...-.|.|||
T Consensus        12 l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~   91 (229)
T KOG3087|consen   12 LELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEF   91 (229)
T ss_pred             ceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEe
Confidence            3445788888999998766533433333332111       123467899999999776776666677777778899999


Q ss_pred             CCC-CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC---CeEEcccCCCccc
Q 024659          135 MPN-DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSCFGLMKNS  206 (264)
Q Consensus       135 ~~~-~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~---~~kl~dfg~~~~~  206 (264)
                      +++ .++.+++......+........++.+|-..+.-||.+ +++|+||.++||++..++   .+.++|||++...
T Consensus        92 ~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n-diiHGDLTTSNill~~~~~~~~~~lIdfgls~~s  166 (229)
T KOG3087|consen   92 IDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN-DIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS  166 (229)
T ss_pred             ccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC-CeecccccccceEEecCCCcCceEEEeecchhcc
Confidence            977 4788888653333344444478899999999999999 999999999999997554   3589999997654

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.41  E-value=3.8e-12  Score=98.78  Aligned_cols=136  Identities=10%  Similarity=0.110  Sum_probs=96.6

Q ss_pred             ccCCCCCCCeEEEEEeCC-------CCEEEEEEeCCCCC---------------------hh-HH----HHHHHHHHHhc
Q 024659           63 SEHGEKAPNVVYKGKLEN-------QFRIAVKRFNRSAW---------------------PD-AR----QFLEEARAVGQ  109 (264)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~---------------------~~-~~----~~~~e~~~l~~  109 (264)
                      +.||.|--+.||.|...+       +..+|+|..+....                     .+ ..    ...+|++.|.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            457888889999998543       47899998853100                     01 11    23479999999


Q ss_pred             CCCC--CccccceeeEeCCcceEEEecCCCCCHHH-hhhcCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCceeeccCCC
Q 024659          110 LRNR--RLANLLGCCCEGDERLLVAEYMPNDTLAK-HLFHWETQPMKWAMRLRVALHIAEALEYC-TSKERALYHDLNAY  185 (264)
Q Consensus       110 l~h~--~i~~~~~~~~~~~~~~lv~e~~~~~sL~~-~l~~~~~~~~~~~~~~~i~~qi~~~l~~l-h~~~~i~H~dl~~~  185 (264)
                      +...  ++.+.+++    ..-+|||||+.+..+.. .++   ...++......+..+++.+|..| |.. |++|+||++.
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk---d~~~~~~~~~~i~~~i~~~l~~l~H~~-glVHGDLs~~  154 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK---DAKLNDEEMKNAYYQVLSMMKQLYKEC-NLVHADLSEY  154 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh---ccccCHHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHH
Confidence            8643  45555543    45689999997653321 222   22344556677889999999988 888 9999999999


Q ss_pred             CeeeCCCCCeEEcccCCCcccC
Q 024659          186 RIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       186 Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      ||+++ ++.+.++|||.+....
T Consensus       155 NIL~~-~~~v~iIDF~qav~~~  175 (197)
T cd05146         155 NMLWH-DGKVWFIDVSQSVEPT  175 (197)
T ss_pred             HEEEE-CCcEEEEECCCceeCC
Confidence            99997 4689999999876543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.39  E-value=7.7e-13  Score=115.07  Aligned_cols=193  Identities=20%  Similarity=0.234  Sum_probs=152.4

Q ss_pred             ccccccCCC--CCCCeEEEEEe---CCCCEEEEEEeCC--CCChhHHHHHHHHHHHhcCC-CCCccccceeeEeCCcceE
Q 024659           59 ENIVSEHGE--KAPNVVYKGKL---ENQFRIAVKRFNR--SAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        59 ~~~l~~lg~--G~~g~Vy~~~~---~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l  130 (264)
                      ..+.+.+|.  |.+|.+|.+..   .+...+|+|+-+.  .......+-.+|+....+++ |.+.++.+..+...+..++
T Consensus       116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfi  195 (524)
T KOG0601|consen  116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFI  195 (524)
T ss_pred             cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCccee
Confidence            345667798  99999999986   3477888888443  22233334456777777875 8999999999998999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHH----HHHHHhcCCCceeeccCCCCeeeCCC-CCeEEcccCCCcc
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE----ALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKN  205 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~----~l~~lh~~~~i~H~dl~~~Nil~~~~-~~~kl~dfg~~~~  205 (264)
                      -+|++. .+|..+... ....++...++....+...    |+.++|+. +++|-|++|.||+...+ ...+++|||+...
T Consensus       196 qtE~~~-~sl~~~~~~-~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~-~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~  272 (524)
T KOG0601|consen  196 QTELCG-ESLQSYCHT-PCNFLPDNLLWNSLRDWLSRDVTALSHLHSN-NIVHDDLKPANIFTTSDWTSCKLTDFGLVSK  272 (524)
T ss_pred             eecccc-chhHHhhhc-ccccCCchhhhhHHhhhhhcccccccccCCC-cccccccchhheecccccceeecCCcceeEE
Confidence            999885 678877653 3344677777888888888    99999999 99999999999999988 8899999999887


Q ss_pred             cCCCC---------cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          206 SRDGR---------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       206 ~~~~~---------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      +....         ...+...|++||... +.++...|+||+|.+.++..++..++...
T Consensus       273 i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g  330 (524)
T KOG0601|consen  273 ISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVG  330 (524)
T ss_pred             ccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCC
Confidence            65443         114567799999876 56788899999999999999998877543

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.36  E-value=9.8e-12  Score=99.19  Aligned_cols=140  Identities=17%  Similarity=0.180  Sum_probs=103.4

Q ss_pred             ccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCC--ccccceeeEeC---CcceEEEecCC
Q 024659           63 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRR--LANLLGCCCEG---DERLLVAEYMP  136 (264)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~--i~~~~~~~~~~---~~~~lv~e~~~  136 (264)
                      +.++.|..+.+|++...+|..+++|....... .....+.+|+++++.+.+.+  +.+++.+....   +..+++|||++
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~   83 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD   83 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence            35689999999999977767899999875432 13456788999999997643  56667766543   25689999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC------------------------------------------
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK------------------------------------------  174 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~------------------------------------------  174 (264)
                      +.++.+.+.   ...++......++.+++..|..||+.                                          
T Consensus        84 G~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (223)
T cd05154          84 GRVLRDRLL---RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL  160 (223)
T ss_pred             CEecCCCCC---CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence            988876542   12455666666777777777777631                                          


Q ss_pred             -------------CCceeeccCCCCeeeCC--CCCeEEcccCCCcc
Q 024659          175 -------------ERALYHDLNAYRIVFDD--DVNPRLSCFGLMKN  205 (264)
Q Consensus       175 -------------~~i~H~dl~~~Nil~~~--~~~~kl~dfg~~~~  205 (264)
                                   ..++|+|+++.||+++.  ++.+.++||+.+..
T Consensus       161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence                         24689999999999998  56789999998764

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.29  E-value=6.9e-11  Score=96.66  Aligned_cols=132  Identities=11%  Similarity=0.109  Sum_probs=97.5

Q ss_pred             eEEEEEeCCCCEEEEEEeCCCCChh-H----------HHHHHHHHHHhcCCCCCcccc--ceeeEe-----CCcceEEEe
Q 024659           72 VVYKGKLENQFRIAVKRFNRSAWPD-A----------RQFLEEARAVGQLRNRRLANL--LGCCCE-----GDERLLVAE  133 (264)
Q Consensus        72 ~Vy~~~~~~~~~vavK~~~~~~~~~-~----------~~~~~e~~~l~~l~h~~i~~~--~~~~~~-----~~~~~lv~e  133 (264)
                      .|.+.... |+.+.+|......+.. .          ..+.+|++.+.++...+|...  +++...     ....++|+|
T Consensus        37 rvvr~~~~-g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte  115 (268)
T PRK15123         37 RTLRFELA-GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE  115 (268)
T ss_pred             eEEEEEEC-CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence            36676664 4578999775444221 1          137789999988865555443  445433     124679999


Q ss_pred             cCCCC-CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC-------CCCeEEcccCCCcc
Q 024659          134 YMPND-TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-------DVNPRLSCFGLMKN  205 (264)
Q Consensus       134 ~~~~~-sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~-------~~~~kl~dfg~~~~  205 (264)
                      ++++. +|.+++..+...+.+......++.+++..+.-||.. |++|+|++++||+++.       +..+.++||+.+..
T Consensus       116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~-Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA-GINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             eCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC-cCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            99885 899988643344566677789999999999999999 9999999999999975       46799999998854

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.27  E-value=4.5e-12  Score=110.32  Aligned_cols=196  Identities=17%  Similarity=0.120  Sum_probs=149.6

Q ss_pred             ccccccccCCCCCCCeEEEEEe--CCCCEEEEEEeCCCCChhHHH--HHHHHHHHhcC-CCCCccccceeeEeCCcceEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL--ENQFRIAVKRFNRSAWPDARQ--FLEEARAVGQL-RNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~--~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      .++..+..||.|.|+.|++...  .++..+++|.+.........+  -..|+.+...+ .|.+++..+..+......++-
T Consensus       265 ~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip  344 (524)
T KOG0601|consen  265 TDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIP  344 (524)
T ss_pred             CCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCc
Confidence            4456788899999999998763  457788888887654333333  23566666666 488888888888777778888


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC-CCeEEcccCCCcccCC--
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSRD--  208 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~-~~~kl~dfg~~~~~~~--  208 (264)
                      .|||.++++.....  ....+....++++..|++.++.++|++ .++|.|++|+||++..+ +..++.|||..+....  
T Consensus       345 ~e~~~~~s~~l~~~--~~~~~d~~~~~~~~~q~~~~l~~i~s~-~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~  421 (524)
T KOG0601|consen  345 LEFCEGGSSSLRSV--TSQMLDEDPRLRLTAQILTALNVIHSK-LFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSS  421 (524)
T ss_pred             hhhhcCcchhhhhH--HHHhcCcchhhhhHHHHHhccccccch-hhhcccccccceeeccchhhhhccccccccccceec
Confidence            89999988876652  455677888899999999999999999 99999999999999876 8889999998864221  


Q ss_pred             CCcccccccc-cccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          209 GRSYSTNLAF-TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       209 ~~~~~~~~~y-~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ......+..| .++.......+..++|++|||....+.+++.+.....
T Consensus       422 ~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~  469 (524)
T KOG0601|consen  422 GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG  469 (524)
T ss_pred             ccccccccccccchhhccccccccccccccccccccccccCcccCccc
Confidence            1222233334 2455555666888999999999999999999876653

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.24  E-value=1.2e-10  Score=90.01  Aligned_cols=126  Identities=18%  Similarity=0.158  Sum_probs=82.0

Q ss_pred             EEEEEeCCCCEEEEEEeCCCCC------------------------hh--HHHHHHHHHHHhcCCCCC--ccccceeeEe
Q 024659           73 VYKGKLENQFRIAVKRFNRSAW------------------------PD--ARQFLEEARAVGQLRNRR--LANLLGCCCE  124 (264)
Q Consensus        73 Vy~~~~~~~~~vavK~~~~~~~------------------------~~--~~~~~~e~~~l~~l~h~~--i~~~~~~~~~  124 (264)
                      ||.|...++..+|+|..+....                        ..  .....+|++.|.++...+  +.+++++.  
T Consensus         2 Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~--   79 (188)
T PF01163_consen    2 VYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN--   79 (188)
T ss_dssp             EEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE--
T ss_pred             EEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe--
Confidence            8999988888999999853210                        00  134678999999998664  55555442  


Q ss_pred             CCcceEEEecCC--CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHH-HhcCCCceeeccCCCCeeeCCCCCeEEcccC
Q 024659          125 GDERLLVAEYMP--NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEY-CTSKERALYHDLNAYRIVFDDDVNPRLSCFG  201 (264)
Q Consensus       125 ~~~~~lv~e~~~--~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~-lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg  201 (264)
                        .-.|||||++  |..+..+...    .++......++.+++..+.. +|.. |++|+|+++.||+++++ .+.++|||
T Consensus        80 --~~~ivME~I~~~G~~~~~l~~~----~~~~~~~~~~~~~il~~~~~~~~~~-givHGDLs~~NIlv~~~-~~~iIDf~  151 (188)
T PF01163_consen   80 --RNVIVMEYIGEDGVPLPRLKDV----DLSPEEPKELLEEILEEIIKMLHKA-GIVHGDLSEYNILVDDG-KVYIIDFG  151 (188)
T ss_dssp             --TTEEEEE--EETTEEGGCHHHC----GGGGSTHHHHHHHHHHHHHHHHHCT-TEEESS-STTSEEEETT-CEEE--GT
T ss_pred             --CCEEEEEecCCCccchhhHHhc----cccchhHHHHHHHHHHHHHHHHHhc-CceecCCChhhEEeecc-eEEEEecC
Confidence              3479999998  6545443321    11133455677788885544 5788 99999999999999987 99999999


Q ss_pred             CCcccCC
Q 024659          202 LMKNSRD  208 (264)
Q Consensus       202 ~~~~~~~  208 (264)
                      .+.....
T Consensus       152 qav~~~~  158 (188)
T PF01163_consen  152 QAVDSSH  158 (188)
T ss_dssp             TEEETTS
T ss_pred             cceecCC
Confidence            8875543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.23  E-value=1.6e-11  Score=99.94  Aligned_cols=150  Identities=17%  Similarity=0.165  Sum_probs=114.7

Q ss_pred             HHHHHHhcCCCCCccccceeeEeCC-----cceEEEecCCCCCHHHhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcC
Q 024659          102 EEARAVGQLRNRRLANLLGCCCEGD-----ERLLVAEYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSK  174 (264)
Q Consensus       102 ~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lh~~  174 (264)
                      .-+..|-++.|.||+++..++.+..     ...+++||+..|++..+|++..  ...+......+|+.||+.||.|||+-
T Consensus       116 ~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~  195 (458)
T KOG1266|consen  116 AVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC  195 (458)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc
Confidence            3455677778999999999986533     3678999999999999997542  34567778889999999999999986


Q ss_pred             -CCceeeccCCCCeeeCCCCCeEEcccCCCcccCC--------CCcccccccccccccccCCCCCCccceechHHHHHHH
Q 024659          175 -ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL  245 (264)
Q Consensus       175 -~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el  245 (264)
                       .-++|+++..+.|++..+|.+|+..-.-......        .....+-++|.+||+=.....+..+|||+||+..+||
T Consensus       196 ~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlem  275 (458)
T KOG1266|consen  196 DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEM  275 (458)
T ss_pred             CCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHH
Confidence             3689999999999999888888764221111000        0112345788999976666678899999999999999


Q ss_pred             HhCCCC
Q 024659          246 LSGKHI  251 (264)
Q Consensus       246 ~~g~~~  251 (264)
                      .-+..-
T Consensus       276 ailEiq  281 (458)
T KOG1266|consen  276 AILEIQ  281 (458)
T ss_pred             HHheec
Confidence            888743

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=99.13  E-value=6.2e-10  Score=95.89  Aligned_cols=167  Identities=18%  Similarity=0.181  Sum_probs=127.8

Q ss_pred             CCeEEEEE-eCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEe----CCcceEEEecCCC-CCHHHh
Q 024659           70 PNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLLVAEYMPN-DTLAKH  143 (264)
Q Consensus        70 ~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~-~sL~~~  143 (264)
                      ..+.|+++ .-+|..+++|+++............-+++++++.|.|++++..++..    +..+++|++|+++ .+|.+.
T Consensus       289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~  368 (655)
T KOG3741|consen  289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL  368 (655)
T ss_pred             cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence            35788998 56788999999965444444445567889999999999999999863    4568899999876 578775


Q ss_pred             hhcC-------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC
Q 024659          144 LFHW-------------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (264)
Q Consensus       144 l~~~-------------~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~  210 (264)
                      ....             .+...++..++.++.|+..||.++|+. |+..+-|.+.+|+++.+.+++|+..|.........
T Consensus       369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss-GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~  447 (655)
T KOG3741|consen  369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS-GLACKTLDLKKILVTGKMRIRISGCGIMDVLQEDP  447 (655)
T ss_pred             HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc-CceeecccHhHeEeeCcceEEEecccceeeecCCC
Confidence            5321             123456789999999999999999999 99999999999999999899999888765443332


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHhCCC
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKH  250 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~  250 (264)
                      .          +-+.   -..+-|.-.||.+++-|.||..
T Consensus       448 ~----------~~le---~~Qq~D~~~lG~ll~aLAt~~~  474 (655)
T KOG3741|consen  448 T----------EPLE---SQQQNDLRDLGLLLLALATGTE  474 (655)
T ss_pred             C----------cchh---HHhhhhHHHHHHHHHHHhhccc
Confidence            0          1011   1235788899999999999953

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=99.05  E-value=2.7e-09  Score=85.37  Aligned_cols=136  Identities=15%  Similarity=0.127  Sum_probs=96.6

Q ss_pred             cccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCC--------------------Chh--HHHHHHHHHHHhcCCCC--Cc
Q 024659           60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSA--------------------WPD--ARQFLEEARAVGQLRNR--RL  115 (264)
Q Consensus        60 ~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------------------~~~--~~~~~~e~~~l~~l~h~--~i  115 (264)
                      .+-.+||-|--+.||.|....|..+|+|.=+...                    +..  ...+.+|.++|.+|...  .+
T Consensus        94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V  173 (304)
T COG0478          94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV  173 (304)
T ss_pred             hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence            3445689999999999999999999999754211                    001  13467899999999654  67


Q ss_pred             cccceeeEeCCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCe
Q 024659          116 ANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP  195 (264)
Q Consensus       116 ~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~  195 (264)
                      .+.+++-    ...+|||++.|-.|...-       ++......++..|+.-+...-.. |++|+|+++-||+++++|.+
T Consensus       174 P~P~~~n----RHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~-GiVHGDlSefNIlV~~dg~~  241 (304)
T COG0478         174 PKPIAWN----RHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRR-GIVHGDLSEFNILVTEDGDI  241 (304)
T ss_pred             CCccccc----cceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHc-CccccCCchheEEEecCCCE
Confidence            7777753    447899999997666532       11222333444455444444455 99999999999999999999


Q ss_pred             EEcccCCCcccC
Q 024659          196 RLSCFGLMKNSR  207 (264)
Q Consensus       196 kl~dfg~~~~~~  207 (264)
                      .++||.-+....
T Consensus       242 ~vIDwPQ~v~~~  253 (304)
T COG0478         242 VVIDWPQAVPIS  253 (304)
T ss_pred             EEEeCcccccCC
Confidence            999998765433

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.99  E-value=1.7e-10  Score=106.37  Aligned_cols=200  Identities=15%  Similarity=0.103  Sum_probs=138.2

Q ss_pred             CccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCC---CChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      ++...+++-+-.|+++.++.+.-. .+...+.|.....   ...+.+....+-.++-...+|-++....-+......+++
T Consensus       803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~  882 (1205)
T KOG0606|consen  803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLV  882 (1205)
T ss_pred             CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchh
Confidence            344556666778888888877632 2333333333221   111222222333333333445555555544456678899


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC----
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR----  207 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~----  207 (264)
                      ++|..+++|...+..  ....+....+.....+..+..+||.. .+.|+|++|.|.++..++..++.|||......    
T Consensus       883 ~~~~~~~~~~Skl~~--~~~~saepaRs~i~~~vqs~e~L~s~-~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p  959 (1205)
T KOG0606|consen  883 GHYLNGGDLPSKLHN--SGCLSAEPARSPILERVQSLESLHSS-LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPP  959 (1205)
T ss_pred             hHHhccCCchhhhhc--CCCcccccccchhHHHHhhhhccccc-hhhcccccccchhhcccCCcccCccccccccccccC
Confidence            999999999988753  22455555566777888899999998 79999999999999999999999998432110    


Q ss_pred             ---C----------------------------CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          208 ---D----------------------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       208 ---~----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                         .                            .....+|+.|.+||.+.+......+|+|++|++++|.++|.+||....
T Consensus       960 ~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen  960 TTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred             cCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence               0                            011245788999999999999999999999999999999999997665


Q ss_pred             cc
Q 024659          257 SS  258 (264)
Q Consensus       257 ~~  258 (264)
                      .+
T Consensus      1040 pq 1041 (1205)
T KOG0606|consen 1040 PQ 1041 (1205)
T ss_pred             hh
Confidence            44

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.96  E-value=4.6e-09  Score=92.96  Aligned_cols=139  Identities=14%  Similarity=0.102  Sum_probs=92.2

Q ss_pred             cCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhH----------------------------------------HHHHHH
Q 024659           64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA----------------------------------------RQFLEE  103 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~~~e  103 (264)
                      .++.++-|.||+|++.+|+.||||+.++.-.+..                                        -++.+|
T Consensus       132 PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~E  211 (517)
T COG0661         132 PIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRRE  211 (517)
T ss_pred             chhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHHH
Confidence            5688999999999999999999999876422111                                        013344


Q ss_pred             HHHHhcCC-----CCCccccceee-EeCCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHH-HHHHhcCCC
Q 024659          104 ARAVGQLR-----NRRLANLLGCC-CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEA-LEYCTSKER  176 (264)
Q Consensus       104 ~~~l~~l~-----h~~i~~~~~~~-~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~-l~~lh~~~~  176 (264)
                      +..+.+++     .+++ .+=.++ .-.+...++|||++|-.+.+.... ...+++..   .++..++.+ +..+-.. |
T Consensus       212 A~n~~~~~~nf~~~~~v-~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l-~~~g~d~k---~ia~~~~~~f~~q~~~d-g  285 (517)
T COG0661         212 AANAERFRENFKDDPDV-YVPKVYWEYTTRRVLTMEWIDGIKISDIAAL-KSAGIDRK---ELAELLVRAFLRQLLRD-G  285 (517)
T ss_pred             HHHHHHHHHHcCCCCCe-EeceeehhccCCcEEEEEeeCCEecccHHHH-HhcCCCHH---HHHHHHHHHHHHHHHhc-C
Confidence            44444442     2222 222222 224556899999999888887532 22455533   333333333 2344445 9


Q ss_pred             ceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       177 i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      ++|.|.+|.||+++.+|.+.+.|||+......
T Consensus       286 ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         286 FFHADPHPGNILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             ccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence            99999999999999999999999999876543

>PRK09902 hypothetical protein; Provisional

Probab=98.93  E-value=3e-08  Score=77.38  Aligned_cols=138  Identities=13%  Similarity=0.050  Sum_probs=99.1

Q ss_pred             CCCCCCeEEEEEeCCCCEEEEEEeCCC---C---ChhHHHHHHHHHHHhcCCCCC--ccccceeeEeC----CcceEEEe
Q 024659           66 GEKAPNVVYKGKLENQFRIAVKRFNRS---A---WPDARQFLEEARAVGQLRNRR--LANLLGCCCEG----DERLLVAE  133 (264)
Q Consensus        66 g~G~~g~Vy~~~~~~~~~vavK~~~~~---~---~~~~~~~~~e~~~l~~l~h~~--i~~~~~~~~~~----~~~~lv~e  133 (264)
                      |.|+-+.|++...++. .+-+|+-...   .   +.....|.+|+..|.++...+  +.++.......    -..+||+|
T Consensus        27 ~rgG~SgV~r~~~~g~-~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVTe  105 (216)
T PRK09902         27 RRNGMSGVQCVERNGK-KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTE  105 (216)
T ss_pred             CCCCcceEEEEEeCCc-EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEEE
Confidence            5577777998877666 4666654311   0   223456899999999996433  44444221111    12578999


Q ss_pred             cCCC-CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCC--eEEcccCCCcc
Q 024659          134 YMPN-DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN--PRLSCFGLMKN  205 (264)
Q Consensus       134 ~~~~-~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~--~kl~dfg~~~~  205 (264)
                      -+++ .+|.+++....-.+.+......++.+++..+.-||+. |+.|+|+.+.||+++.++.  ++++||.-++.
T Consensus       106 ~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~-Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        106 DMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV-NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             eCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence            7653 5898888644344567778889999999999999999 9999999999999986666  99999987654

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.93  E-value=3.5e-08  Score=83.49  Aligned_cols=186  Identities=16%  Similarity=0.140  Sum_probs=123.5

Q ss_pred             ccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcC-CCCCcccccee------e-EeCCcceEEEec
Q 024659           63 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGC------C-CEGDERLLVAEY  134 (264)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~------~-~~~~~~~lv~e~  134 (264)
                      ..||+|+-+.+|-.---.  ..+-|++......-..   +-+..|.+. .||-+..-+.+      . ..+....+.|+.
T Consensus        17 r~LgqGgea~ly~l~e~~--d~VAKIYh~Pppa~~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP~   91 (637)
T COG4248          17 RPLGQGGEADLYTLGEVR--DQVAKIYHAPPPAAQA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMPK   91 (637)
T ss_pred             ccccCCccceeeecchhh--chhheeecCCCchHHH---HHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEeccc
Confidence            356899888888543111  2355666654433222   223344444 45543221111      0 112236678887


Q ss_pred             CCCC-CHHHhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC
Q 024659          135 MPND-TLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       135 ~~~~-sL~~~l~~~----~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~  209 (264)
                      +.+. .+..+++..    .-....|+..++.++.++.+...||.. |.+-+|++++|+|+++++.+.|.|-..-....++
T Consensus        92 v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~-Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~ng  170 (637)
T COG4248          92 VSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH-GHVVGDVNQNSFLVSDDSKVVLVDSDSFQINANG  170 (637)
T ss_pred             CCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc-CCcccccCccceeeecCceEEEEcccceeeccCC
Confidence            7664 233333321    123467999999999999999999999 9999999999999999999999986544433333


Q ss_pred             Cc---cccccccccccccc-----CCCCCCccceechHHHHHHHHhC-CCCCCC
Q 024659          210 RS---YSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSG-KHIPPS  254 (264)
Q Consensus       210 ~~---~~~~~~y~aPE~~~-----~~~~~~~~DiwslG~~l~el~~g-~~~~~~  254 (264)
                      ..   ..+...|.+||...     +..-+...|.|.||+++++++.| .+||++
T Consensus       171 ~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysG  224 (637)
T COG4248         171 TLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSG  224 (637)
T ss_pred             ceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCc
Confidence            33   45678899999765     23456789999999999999888 788865

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.92  E-value=2.8e-08  Score=78.83  Aligned_cols=159  Identities=19%  Similarity=0.193  Sum_probs=108.8

Q ss_pred             ccCHHHHHHHhCCCccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhH------------------------H
Q 024659           43 EYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA------------------------R   98 (264)
Q Consensus        43 ~~~~~~~~~~~~~~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~------------------------~   98 (264)
                      ..+.+.+....+.-....+.+.|+.|--+.||+|...++..+|+|+++.......                        .
T Consensus        34 ~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~  113 (268)
T COG1718          34 KRTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFA  113 (268)
T ss_pred             hHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHH
Confidence            4456666666666666778888889999999999988888999999975321110                        1


Q ss_pred             HHHHHHHHHhcCCCC--CccccceeeEeCCcceEEEecCCCCCH-HHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 024659           99 QFLEEARAVGQLRNR--RLANLLGCCCEGDERLLVAEYMPNDTL-AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE  175 (264)
Q Consensus        99 ~~~~e~~~l~~l~h~--~i~~~~~~~~~~~~~~lv~e~~~~~sL-~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~  175 (264)
                      ...+|+..|+++...  .+.+.+++.    .-.|||||++...+ .-.|   ..-++.......+..+++..+.-|-...
T Consensus       114 W~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~L---kDv~~e~~e~~~~~~~~v~~~~~l~~~a  186 (268)
T COG1718         114 WARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRL---KDVPLELEEAEGLYEDVVEYMRRLYKEA  186 (268)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCc---ccCCcCchhHHHHHHHHHHHHHHHHHhc
Confidence            234567777776433  334444433    23689999965411 1111   1222333356677888888888777734


Q ss_pred             CceeeccCCCCeeeCCCCCeEEcccCCCcccCCC
Q 024659          176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       176 ~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~  209 (264)
                      ++||+||+.-|||+. ++.+.++|+|-+.....+
T Consensus       187 ~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~hp  219 (268)
T COG1718         187 GLVHGDLSEYNILVH-DGEPYIIDVSQAVTIDHP  219 (268)
T ss_pred             CcccccchhhheEEE-CCeEEEEECccccccCCC
Confidence            999999999999999 899999999988755433

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.91  E-value=6.5e-09  Score=82.18  Aligned_cols=107  Identities=20%  Similarity=0.220  Sum_probs=82.7

Q ss_pred             HHHHHHHHHHhcCCCCCc--cccceeeEeCC----cceEEEecCCC-CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHH
Q 024659           98 RQFLEEARAVGQLRNRRL--ANLLGCCCEGD----ERLLVAEYMPN-DTLAKHLFHWETQPMKWAMRLRVALHIAEALEY  170 (264)
Q Consensus        98 ~~~~~e~~~l~~l~h~~i--~~~~~~~~~~~----~~~lv~e~~~~-~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~  170 (264)
                      ....+|...+..+...+|  .+.+++.....    ..++|+|++++ .+|.+++.....  .+......++.+++..+.-
T Consensus        56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~~  133 (206)
T PF06293_consen   56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIAK  133 (206)
T ss_pred             hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHHH
Confidence            457788888888865443  45555554422    34789999987 479998864222  5566778899999999999


Q ss_pred             HhcCCCceeeccCCCCeeeCCCC---CeEEcccCCCcccC
Q 024659          171 CTSKERALYHDLNAYRIVFDDDV---NPRLSCFGLMKNSR  207 (264)
Q Consensus       171 lh~~~~i~H~dl~~~Nil~~~~~---~~kl~dfg~~~~~~  207 (264)
                      ||+. |++|+|+++.|||++.+.   .+.++||+.+....
T Consensus       134 lH~~-gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~  172 (206)
T PF06293_consen  134 LHDA-GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP  172 (206)
T ss_pred             HHHC-cCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence            9999 999999999999999876   89999999877543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.77  E-value=1.5e-07  Score=75.35  Aligned_cols=138  Identities=12%  Similarity=0.114  Sum_probs=83.9

Q ss_pred             cCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCC--ccccceeeEeCCcceEEEecCCCCC-H
Q 024659           64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR--LANLLGCCCEGDERLLVAEYMPNDT-L  140 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~~~~~~~~~~~~lv~e~~~~~s-L  140 (264)
                      .||+|..+.||+..   +..+++|......  ......+|.++++.+...+  +.+.+++....+...++|++++|.+ +
T Consensus         8 ~i~~G~t~~~y~~~---~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~   82 (226)
T TIGR02172         8 QTGEGGNGESYTHK---TGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF   82 (226)
T ss_pred             eecCCCCcceeEec---CCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence            45999999999842   3357788876533  3455788999999886443  4677777767777889999998863 2


Q ss_pred             HHhhh--------------c----CCC---CCCCHHHHH-HHHH----------HHHHH-HHHHh---cCCCceeeccCC
Q 024659          141 AKHLF--------------H----WET---QPMKWAMRL-RVAL----------HIAEA-LEYCT---SKERALYHDLNA  184 (264)
Q Consensus       141 ~~~l~--------------~----~~~---~~~~~~~~~-~i~~----------qi~~~-l~~lh---~~~~i~H~dl~~  184 (264)
                      ...+.              .    -..   ...+..... .+..          .+... ..+|.   ....++|+|+.|
T Consensus        83 ~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~  162 (226)
T TIGR02172        83 SRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQI  162 (226)
T ss_pred             hhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCC
Confidence            11110              0    000   111111100 0100          01111 12221   122578999999


Q ss_pred             CCeeeCCCCCeEEcccCCCcccC
Q 024659          185 YRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       185 ~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      .||++++++ +.++||+.+....
T Consensus       163 ~Nii~~~~~-~~iIDwe~a~~Gd  184 (226)
T TIGR02172       163 GNLITSGKG-TYWIDLGDFGYGN  184 (226)
T ss_pred             CcEEEcCCC-cEEEechhcCcCC
Confidence            999999888 9999999876433

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.73  E-value=2.6e-09  Score=94.88  Aligned_cols=94  Identities=24%  Similarity=0.440  Sum_probs=77.2

Q ss_pred             HHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCcc-------------cccccccccccccCCC
Q 024659          162 LHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY-------------STNLAFTPPEYLRTGR  228 (264)
Q Consensus       162 ~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~~-------------~~~~~y~aPE~~~~~~  228 (264)
                      .+++.|+.++|...++||++|.|++|.++.++.+||..|+.+.....+..+             .....|.|||++.+..
T Consensus       106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~  185 (700)
T KOG2137|consen  106 GNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTT  185 (700)
T ss_pred             hcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcccc
Confidence            344499999999889999999999999999999999999987654442211             2246799999999978


Q ss_pred             CCCccceechHHHHHHHH-hCCCCCCCC
Q 024659          229 VTPESVMYSFGTLLLDLL-SGKHIPPSH  255 (264)
Q Consensus       229 ~~~~~DiwslG~~l~el~-~g~~~~~~~  255 (264)
                      .+..+|++|+|+++|.+. .|+.++...
T Consensus       186 ~~~~sd~fSlG~li~~i~~~gk~i~~a~  213 (700)
T KOG2137|consen  186 NTPASDVFSLGVLIYTIYNGGKSIIAAN  213 (700)
T ss_pred             ccccccceeeeeEEEEEecCCcchhhcc
Confidence            899999999999999998 666666544

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.68  E-value=2.7e-07  Score=72.41  Aligned_cols=133  Identities=14%  Similarity=0.088  Sum_probs=82.7

Q ss_pred             cccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHH---------HHHHHHHHhcCCCCCc---cccceeeEe---
Q 024659           60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQ---------FLEEARAVGQLRNRRL---ANLLGCCCE---  124 (264)
Q Consensus        60 ~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~---------~~~e~~~l~~l~h~~i---~~~~~~~~~---  124 (264)
                      ..++.+-......|.+-..++ +.+++|.......-..+.         +.+.+..+.+++..++   ..++.+..-   
T Consensus        34 ~~~kv~k~~~r~~ValIei~~-~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ekk~~  112 (229)
T PF06176_consen   34 KIIKVFKNTKRNYVALIEIDG-KKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEKKIF  112 (229)
T ss_pred             eEEEeecCCCccEEEEEEECC-cEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeeeeec
Confidence            333333444445565555544 588899887644222111         2334444444443333   232333221   


Q ss_pred             --CCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCC
Q 024659          125 --GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL  202 (264)
Q Consensus       125 --~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~  202 (264)
                        ....++++||++|..|.+...      ++.    .+...+..++..+|+. |++|+|.+|.|+++++++ ++++||+.
T Consensus       113 ~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~-G~~HGD~hpgNFlv~~~~-i~iID~~~  180 (229)
T PF06176_consen  113 RYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKH-GFYHGDPHPGNFLVSNNG-IRIIDTQG  180 (229)
T ss_pred             cceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHc-CCccCCCCcCcEEEECCc-EEEEECcc
Confidence              234568999999988876542      332    2446677789999999 999999999999998554 99999987


Q ss_pred             Ccc
Q 024659          203 MKN  205 (264)
Q Consensus       203 ~~~  205 (264)
                      .+.
T Consensus       181 k~~  183 (229)
T PF06176_consen  181 KRM  183 (229)
T ss_pred             ccc
Confidence            653

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=98.59  E-value=3.9e-07  Score=80.70  Aligned_cols=138  Identities=16%  Similarity=0.101  Sum_probs=87.9

Q ss_pred             cCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhH-------------------------------------HHHHHHHHH
Q 024659           64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA-------------------------------------RQFLEEARA  106 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-------------------------------------~~~~~e~~~  106 (264)
                      .||..+.|.||++++.+|+.||||+=++.-....                                     -+|.+|++.
T Consensus       168 piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~N  247 (538)
T KOG1235|consen  168 PIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAKN  247 (538)
T ss_pred             hhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHHh
Confidence            4688999999999999999999998765321110                                     013334433


Q ss_pred             Hhc----CCCCC------ccccceeeEeCCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHH-HHHhcCC
Q 024659          107 VGQ----LRNRR------LANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEAL-EYCTSKE  175 (264)
Q Consensus       107 l~~----l~h~~------i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l-~~lh~~~  175 (264)
                      ..+    +.|-+      |.+++-.+  .....|+|||++|..+.+.-.- ....++..   .++..+..+. ..+-.. 
T Consensus       248 ae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i-~~~gi~~~---~i~~~l~~~~~~qIf~~-  320 (538)
T KOG1235|consen  248 AERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKINDLDAI-DKRGISPH---DILNKLVEAYLEQIFKT-  320 (538)
T ss_pred             HHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCCHHHH-HHcCCCHH---HHHHHHHHHHHHHHHhc-
Confidence            333    23433      23333222  3357899999999877665321 33445544   3334444433 223344 


Q ss_pred             CceeeccCCCCeeeCC----CCCeEEcccCCCcccCC
Q 024659          176 RALYHDLNAYRIVFDD----DVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       176 ~i~H~dl~~~Nil~~~----~~~~kl~dfg~~~~~~~  208 (264)
                      |++|+|-+|.||++..    ++.+.+.|||+......
T Consensus       321 GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  321 GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             CCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence            9999999999999983    67899999999875543

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.57  E-value=1.1e-06  Score=71.38  Aligned_cols=137  Identities=15%  Similarity=0.093  Sum_probs=82.4

Q ss_pred             CCCCC-CeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC-CCCccccceeeEeCCcceEEEecCCCCCHHHh
Q 024659           66 GEKAP-NVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMPNDTLAKH  143 (264)
Q Consensus        66 g~G~~-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~  143 (264)
                      ..|.+ ..||+....+ ..+++|......   ...+.+|+++++.+. +--+.+++++....+..++||++++|.++...
T Consensus         7 ~~g~~~~~v~~~~~~~-~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~   82 (244)
T cd05150           7 TEGQSGATVYRLDGKN-PGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL   82 (244)
T ss_pred             CCCCCcCeEEEEcCCC-CcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence            44444 7899997654 578888876543   234667888888884 33455667766655567899999999877643


Q ss_pred             hh-------------------cCC--CCCCCH--HHHHHH-----------------------HHHHHHHHHHHh---cC
Q 024659          144 LF-------------------HWE--TQPMKW--AMRLRV-----------------------ALHIAEALEYCT---SK  174 (264)
Q Consensus       144 l~-------------------~~~--~~~~~~--~~~~~i-----------------------~~qi~~~l~~lh---~~  174 (264)
                      ..                   ...  ..++..  ......                       ..++..-|....   ..
T Consensus        83 ~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  162 (244)
T cd05150          83 WEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEED  162 (244)
T ss_pred             hcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCc
Confidence            20                   000  001110  000000                       111111111110   01


Q ss_pred             CCceeeccCCCCeeeCCCCCeEEcccCCCccc
Q 024659          175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (264)
Q Consensus       175 ~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~  206 (264)
                      ..++|+|+.|.||++++++.+.|+||+.+...
T Consensus       163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~g  194 (244)
T cd05150         163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLGVA  194 (244)
T ss_pred             eEEECCCCCCccEEEeCCcEEEEEEccccccc
Confidence            25899999999999999877899999987643

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.54  E-value=4.9e-07  Score=72.47  Aligned_cols=78  Identities=21%  Similarity=0.303  Sum_probs=55.5

Q ss_pred             cccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCC--ccccceeeEe---CCcceEEEecCC
Q 024659           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR--LANLLGCCCE---GDERLLVAEYMP  136 (264)
Q Consensus        62 l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~~~~~~~---~~~~~lv~e~~~  136 (264)
                      ++.++.|..+.||++...++ .+++|.....  .....+.+|..+++.+....  +.+++.....   ....+++|++++
T Consensus         2 i~~l~~G~~n~~~~v~~~~~-~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~   78 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDDG-RYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP   78 (239)
T ss_dssp             EEEEEESSSSEEEEEEETTS-EEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred             CccCCCCCeeeEEEEEECCc-EEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence            34568899999999998774 8999998764  34566778888888885433  4555654322   234688999999


Q ss_pred             CCCHHH
Q 024659          137 NDTLAK  142 (264)
Q Consensus       137 ~~sL~~  142 (264)
                      +.++..
T Consensus        79 g~~~~~   84 (239)
T PF01636_consen   79 GRPLDD   84 (239)
T ss_dssp             SEEHHH
T ss_pred             cccccc
Confidence            987777

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=98.49  E-value=3.8e-06  Score=65.63  Aligned_cols=130  Identities=18%  Similarity=0.084  Sum_probs=89.1

Q ss_pred             cCCCCCCCeEEEEEeCCCCEEEEEEeCCCC----------------ChhHHHHHHHHHHHhcCC------CCCcccccee
Q 024659           64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSA----------------WPDARQFLEEARAVGQLR------NRRLANLLGC  121 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~e~~~l~~l~------h~~i~~~~~~  121 (264)
                      .||+|+...||.--  +....+||+.....                .....+..+|+.....+.      +.+|.+++|+
T Consensus         8 ~i~~G~~R~cy~HP--~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~   85 (199)
T PF10707_consen    8 LIAQGGERDCYQHP--DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYGF   85 (199)
T ss_pred             ccccCCCceEEECC--CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeEE
Confidence            35999999998654  33457888888765                112344556665555544      7889999999


Q ss_pred             eEeCCcceEEEecCC------CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC--C
Q 024659          122 CCEGDERLLVAEYMP------NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD--V  193 (264)
Q Consensus       122 ~~~~~~~~lv~e~~~------~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~--~  193 (264)
                      ..++.-..+|+|.+.      ..||.+++.   ...++. .....+.+   -..+|-+. +|+.+|++|.||++...  +
T Consensus        86 veT~~G~Glv~e~I~d~dG~~s~TL~~~l~---~~~~~~-~~~~~L~~---f~~~l~~~-~Iv~~dl~~~NIv~~~~~~~  157 (199)
T PF10707_consen   86 VETNLGLGLVVELIRDADGNISPTLEDYLK---EGGLTE-ELRQALDE---FKRYLLDH-HIVIRDLNPHNIVVQRRDSG  157 (199)
T ss_pred             EecCCceEEEEEEEECCCCCcCccHHHHHH---cCCccH-HHHHHHHH---HHHHHHHc-CCeecCCCcccEEEEecCCC
Confidence            999888899998763      347888884   234554 33333333   34566677 99999999999999632  2


Q ss_pred             --CeEEcc-cCCC
Q 024659          194 --NPRLSC-FGLM  203 (264)
Q Consensus       194 --~~kl~d-fg~~  203 (264)
                        .+.|+| ||..
T Consensus       158 ~~~lvlIDG~G~~  170 (199)
T PF10707_consen  158 EFRLVLIDGLGEK  170 (199)
T ss_pred             ceEEEEEeCCCCc
Confidence              578887 5543

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PLN02876 acyl-CoA dehydrogenase

Probab=98.47  E-value=3.4e-06  Score=80.06  Aligned_cols=80  Identities=15%  Similarity=0.258  Sum_probs=57.7

Q ss_pred             ccccCCCCCCCeEEEEEeCCC---CEEEEEEeCCCC-ChhHHHHHHHHHHHhcCC-CCCc--cccceeeEeC---CcceE
Q 024659           61 IVSEHGEKAPNVVYKGKLENQ---FRIAVKRFNRSA-WPDARQFLEEARAVGQLR-NRRL--ANLLGCCCEG---DERLL  130 (264)
Q Consensus        61 ~l~~lg~G~~g~Vy~~~~~~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~~i--~~~~~~~~~~---~~~~l  130 (264)
                      -+.+++.|.++.+|+....++   ..+++|+.+... ......+.+|+++++.+. |.++  .+++.+|.+.   +..++
T Consensus        42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~fl  121 (822)
T PLN02876         42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFY  121 (822)
T ss_pred             eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceE
Confidence            466789999999999886553   367778765432 223456889999999995 6664  6777777553   35789


Q ss_pred             EEecCCCCCH
Q 024659          131 VAEYMPNDTL  140 (264)
Q Consensus       131 v~e~~~~~sL  140 (264)
                      ||||++|..+
T Consensus       122 VME~v~G~~~  131 (822)
T PLN02876        122 IMEYLEGRIF  131 (822)
T ss_pred             EEEecCCccc
Confidence            9999988643

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=98.43  E-value=4.7e-06  Score=62.95  Aligned_cols=132  Identities=18%  Similarity=0.177  Sum_probs=89.4

Q ss_pred             cccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccc-cceeeEeCCcceEEEecCCCC
Q 024659           60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLAN-LLGCCCEGDERLLVAEYMPND  138 (264)
Q Consensus        60 ~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~-~~~~~~~~~~~~lv~e~~~~~  138 (264)
                      +..+.|+.|.++.||++.+.++ .+|+|+-..++  ....+..|+++|..+.-.++.+ ++.+..    .++.|||+.|.
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~~~~-~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~vy~yg~----~~i~me~i~G~   97 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEWRGG-EVALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEVYFYGE----DFIRMEYIDGR   97 (201)
T ss_pred             hhhhhhhcccccEEEEeeccCc-eEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceEEEech----hhhhhhhhcCc
Confidence            4556789999999999998776 78888776554  3456889999999998666543 444332    24569999998


Q ss_pred             CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCC-CCeeeCCCCCeEEcccCCCcccCC
Q 024659          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA-YRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       139 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~-~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      +|.+....     .+..++..+    +..-.-|-.. ||-|+.|+- ...++-.++.+.|+||..|+.-..
T Consensus        98 ~L~~~~~~-----~~rk~l~~v----lE~a~~LD~~-GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k~~  158 (201)
T COG2112          98 PLGKLEIG-----GDRKHLLRV----LEKAYKLDRL-GIEHGELSRPWKNVLVNDRDVYIIDFDSATFKKK  158 (201)
T ss_pred             chhhhhhc-----ccHHHHHHH----HHHHHHHHHh-ccchhhhcCCceeEEecCCcEEEEEccchhhccC
Confidence            88876531     133444333    3333334445 999998864 444444455999999999984333

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.36  E-value=1.5e-07  Score=83.48  Aligned_cols=181  Identities=10%  Similarity=-0.027  Sum_probs=128.4

Q ss_pred             cccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCC-ccccceeeEeCCcceEEEecCCCC-C
Q 024659           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR-LANLLGCCCEGDERLLVAEYMPND-T  139 (264)
Q Consensus        62 l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~lv~e~~~~~-s  139 (264)
                      ....+++++++++|.+....+....+.+..     .....-++++|.+++||| .+..++-+..+...++.++++.++ +
T Consensus       247 fh~fvK~altknpKkRptaeklL~h~fvs~-----~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs  321 (829)
T KOG0576|consen  247 FHNFVKGALTKNPKKRPTAEKLLQHPFVSQ-----TLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRS  321 (829)
T ss_pred             HHHHHHHHhcCCCccCCChhhheeceeecc-----chhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCcc
Confidence            334578899999988854444444555543     245667899999999999 666666676677888999998776 2


Q ss_pred             HHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC---CCcccccc
Q 024659          140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---GRSYSTNL  216 (264)
Q Consensus       140 L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~---~~~~~~~~  216 (264)
                      -..... .....+...+...+.+.-.++++++|+. .-+|+|    ||+..+ +..+..||+.......   .....+++
T Consensus       322 ~~~~~~-~se~~~~~~~~~~~~r~et~~l~~l~~~-~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~~~~t~~~~~  394 (829)
T KOG0576|consen  322 SALEMT-VSEIALEQYQFAYPLRKETRPLAELHSS-YKVHRD----NILGSE-EEVKLLDFAVPPQLTRTMKPRTAIGTP  394 (829)
T ss_pred             ccccCC-hhhHhhhhhhhhhhhhhhcccccccccc-cccCcc----cccccc-cccccccccCCcccCcccccccCCCCC
Confidence            222211 1222333445556677777888999987 668888    666554 7789999998765544   34557789


Q ss_pred             cccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       217 ~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      .++|||+...+.+....|.|+++.-..++--|-+|-..
T Consensus       395 ~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~  432 (829)
T KOG0576|consen  395 EPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSS  432 (829)
T ss_pred             CCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCC
Confidence            99999999999999999999999876677666665443

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=98.31  E-value=2.7e-06  Score=66.11  Aligned_cols=101  Identities=21%  Similarity=0.232  Sum_probs=77.7

Q ss_pred             HHHHHHHhcCCC-CCccccceeeEeCCcceEEEecCCCCCHHHhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhcC-C-C
Q 024659          101 LEEARAVGQLRN-RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW-ETQPMKWAMRLRVALHIAEALEYCTSK-E-R  176 (264)
Q Consensus       101 ~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lh~~-~-~  176 (264)
                      .+|.-+++.+++ +++.+++|.|-+    +++.||.+.+++....... .-...+|..+.+++.+++..+.+++.. . .
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~   82 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF   82 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            357888888875 699999999843    6789999876654210000 112468999999999999999999874 1 3


Q ss_pred             ceeeccCCCCeeeCCCCCeEEcccCCCcc
Q 024659          177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (264)
Q Consensus       177 i~H~dl~~~Nil~~~~~~~kl~dfg~~~~  205 (264)
                      +.-.|++++|+.+++++.+|++|...+..
T Consensus        83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~  111 (188)
T PF12260_consen   83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFV  111 (188)
T ss_pred             EEEeecchHHeEEeCCCcEEEEechhcch
Confidence            55569999999999999999999987653

Proteins in this uncharacterised family are described as transmembrane proteins.

>TIGR02721 ycfN_thiK thiamine kinase

Probab=98.22  E-value=1e-05  Score=66.12  Aligned_cols=139  Identities=13%  Similarity=0.082  Sum_probs=78.2

Q ss_pred             cCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCcc-ccceeeEeCCcceEEEecCCCCCHHH
Q 024659           64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLA-NLLGCCCEGDERLLVAEYMPNDTLAK  142 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~sL~~  142 (264)
                      .+..|..+.+|+... ++..+++|........-.-...+|.++++.+...++. +++...  .  -++|+||++|.++..
T Consensus         3 ~~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~--~--~~~v~e~i~G~~~~~   77 (256)
T TIGR02721         3 TLSGGLTNRSWRIEH-PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN--E--HWLLVEWLEGEVITL   77 (256)
T ss_pred             cCCCcCcCCeEEEEe-CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe--C--CEEEEEeccCccccc
Confidence            346678889998874 4557888876543322111346788888888654443 333322  2  378999998866532


Q ss_pred             h--------------hhcC---C--CCCCCHH-HHHHHHHHH---------HHHHHHHhc-------CCCceeeccCCCC
Q 024659          143 H--------------LFHW---E--TQPMKWA-MRLRVALHI---------AEALEYCTS-------KERALYHDLNAYR  186 (264)
Q Consensus       143 ~--------------l~~~---~--~~~~~~~-~~~~i~~qi---------~~~l~~lh~-------~~~i~H~dl~~~N  186 (264)
                      .              +.+-   .  ..++... .+..+..++         ...+..+..       ...++|+|+.|.|
T Consensus        78 ~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~N  157 (256)
T TIGR02721        78 DQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYN  157 (256)
T ss_pred             ccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCc
Confidence            1              1100   0  1112211 111111111         111111211       1258999999999


Q ss_pred             eeeCCCCCeEEcccCCCcccCC
Q 024659          187 IVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       187 il~~~~~~~kl~dfg~~~~~~~  208 (264)
                      |++++++ +.++||..+....+
T Consensus       158 il~~~~~-~~lIDwE~a~~gdp  178 (256)
T TIGR02721       158 LVVTPQG-LKLIDWEYASDGDI  178 (256)
T ss_pred             EEEeCCC-CEEEeccccCcCCH
Confidence            9999877 78999998875443

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=98.18  E-value=1.9e-05  Score=63.74  Aligned_cols=32  Identities=16%  Similarity=0.122  Sum_probs=27.1

Q ss_pred             CceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       176 ~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      .++|+|+.+.||+++++...-|+||+.+....
T Consensus       165 ~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~gD  196 (235)
T cd05155         165 VWFHGDLAPGNLLVQDGRLSAVIDFGCLGVGD  196 (235)
T ss_pred             eEEeCCCCCCcEEEECCCEEEEEeCcccCcCC
Confidence            58999999999999877667799999876543

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PRK10593 hypothetical protein; Provisional

Probab=98.09  E-value=8.6e-05  Score=62.08  Aligned_cols=78  Identities=12%  Similarity=0.039  Sum_probs=55.8

Q ss_pred             cccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCC---CCccccceeeEe---CCcceEEEe
Q 024659           60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN---RRLANLLGCCCE---GDERLLVAE  133 (264)
Q Consensus        60 ~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~---~~~~~lv~e  133 (264)
                      .-++.||.|..+.||.....++ .+++|..+...  ....+..|++.|+.+..   -.+.++++++..   .+..+||||
T Consensus        17 ~~~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~~--~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE   93 (297)
T PRK10593         17 SRVECISEQPYAALWALYDSQG-NPMPLMARSFS--TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLE   93 (297)
T ss_pred             heeeecCCccceeEEEEEcCCC-CEEEEEecccc--cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEe
Confidence            3445679999999999987666 46667644311  23467889999988853   357788877754   355899999


Q ss_pred             cCCCCCH
Q 024659          134 YMPNDTL  140 (264)
Q Consensus       134 ~~~~~sL  140 (264)
                      ++++.++
T Consensus        94 ~i~G~~~  100 (297)
T PRK10593         94 RLRGVSV  100 (297)
T ss_pred             ccCCEec
Confidence            9988654

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=98.07  E-value=4.6e-05  Score=61.34  Aligned_cols=73  Identities=21%  Similarity=0.165  Sum_probs=47.0

Q ss_pred             ccCCCCCCCeEEEEEeCC--CCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCcc-ccceeeEeCCcceEEEecCCCCC
Q 024659           63 SEHGEKAPNVVYKGKLEN--QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLA-NLLGCCCEGDERLLVAEYMPNDT  139 (264)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~s  139 (264)
                      +.|..|-.+.+|+....+  ++.+++|........ .....+|+.+++.+...++. +++...  .  -.+++||++|.+
T Consensus         4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~--~--~~~l~e~i~G~~   78 (235)
T cd05157           4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATF--Q--NGLIYEFIPGRT   78 (235)
T ss_pred             EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEe--C--CcEEEEeeCCCc
Confidence            456778888999998664  568889976543221 12334688888888544443 333322  2  248999998876


Q ss_pred             H
Q 024659          140 L  140 (264)
Q Consensus       140 L  140 (264)
                      +
T Consensus        79 l   79 (235)
T cd05157          79 L   79 (235)
T ss_pred             C
Confidence            5

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.97  E-value=0.00035  Score=60.46  Aligned_cols=76  Identities=14%  Similarity=0.076  Sum_probs=53.8

Q ss_pred             ccccCCCCCCCeEEEEEeCCC-CEEEEEEeCCC------C-ChhHHHHHHHHHHHhcCC---CCCccccceeeEeCCcce
Q 024659           61 IVSEHGEKAPNVVYKGKLENQ-FRIAVKRFNRS------A-WPDARQFLEEARAVGQLR---NRRLANLLGCCCEGDERL  129 (264)
Q Consensus        61 ~l~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~------~-~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~  129 (264)
                      -++.+|.|.++.||++...+| +.++||.-.+.      . .-..++...|.+.|+.+.   ..++.+++.+  +....+
T Consensus        30 ~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~  107 (401)
T PRK09550         30 TAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAV  107 (401)
T ss_pred             eeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCE
Confidence            345789999999999998776 58999985421      1 123456777888888863   2346666665  345678


Q ss_pred             EEEecCCCC
Q 024659          130 LVAEYMPND  138 (264)
Q Consensus       130 lv~e~~~~~  138 (264)
                      +|||++++.
T Consensus       108 lVME~L~~~  116 (401)
T PRK09550        108 TVMEDLSDH  116 (401)
T ss_pred             EEEecCCCc
Confidence            999998764

>PRK05231 homoserine kinase; Provisional

Probab=97.85  E-value=0.00089  Score=56.55  Aligned_cols=159  Identities=12%  Similarity=0.072  Sum_probs=83.3

Q ss_pred             cCHHHHHHHhCCCcc--ccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCC--ccccc
Q 024659           44 YSIETLRTATSGFAM--ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR--LANLL  119 (264)
Q Consensus        44 ~~~~~~~~~~~~~~~--~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~~  119 (264)
                      .+.+++...-..|..  ..-++.++.|....+|+....+| .+++|++....   ...+..++.++..|...+  +.+++
T Consensus         7 ls~~~l~~~l~~y~~~~~~~~~~l~~G~~n~~y~v~t~~g-~~vLK~~~~~~---~~~l~~~~~~l~~L~~~glpvP~~i   82 (319)
T PRK05231          7 VSDDELAAFLAPYDLGELLSLKGIAEGIENSNFFLTTTQG-EYVLTLFERLT---AEDLPFFLGLMQHLAARGVPVPAPV   82 (319)
T ss_pred             CCHHHHHHHHHhcCCchhhccchhccccccceEEEEeCCC-cEEEEEeccCC---hHHhHHHHHHHHHHHHCCCCCCcce
Confidence            455555444444433  12344567788789999886666 67888875212   233334555555553222  22322


Q ss_pred             ee------eEeCCcceEEEecCCCCCHH-----------Hhhhc---C-CC--------CCCCH-HHHHH----------
Q 024659          120 GC------CCEGDERLLVAEYMPNDTLA-----------KHLFH---W-ET--------QPMKW-AMRLR----------  159 (264)
Q Consensus       120 ~~------~~~~~~~~lv~e~~~~~sL~-----------~~l~~---~-~~--------~~~~~-~~~~~----------  159 (264)
                      ..      ....+..+++++|++|..+.           ..+.+   . ..        ..+.+ .....          
T Consensus        83 ~~~~G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (319)
T PRK05231         83 ARRDGAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQ  162 (319)
T ss_pred             eCCCCCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhH
Confidence            21      12244578999999886431           11110   0 00        01111 11110          


Q ss_pred             --HHHHHH-HHHHHHhc------CCCceeeccCCCCeeeCCCCCeEEcccCCCccc
Q 024659          160 --VALHIA-EALEYCTS------KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (264)
Q Consensus       160 --i~~qi~-~~l~~lh~------~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~  206 (264)
                        .+.+.+ ..+..+..      ..+++|+|+++.||+++.+...-++||+.+...
T Consensus       163 ~~~l~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~~  218 (319)
T PRK05231        163 AALLEAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACND  218 (319)
T ss_pred             HHHHHHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEECCceEEEEecccccCC
Confidence              111111 11122221      127999999999999997666689999987643

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.84  E-value=0.00049  Score=57.86  Aligned_cols=159  Identities=13%  Similarity=0.166  Sum_probs=87.6

Q ss_pred             CHHHHHHHhCCCcc--ccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCC--ccccce
Q 024659           45 SIETLRTATSGFAM--ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR--LANLLG  120 (264)
Q Consensus        45 ~~~~~~~~~~~~~~--~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~~~  120 (264)
                      +.+++...-..|+.  ...++.++.|....+|+...+++ .+++|......  .......|++++..|...+  +.+++.
T Consensus         8 ~~~~l~~~l~~y~~~~~~~i~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i~   84 (307)
T TIGR00938         8 SDEEMSSFLDGYDLGELLSLKGIAEGVENSNYLLTTDVG-RYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPVK   84 (307)
T ss_pred             CHHHHHHHHHhcCCCCceeccccCCccccceEEEEeCCC-cEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCcccc
Confidence            33444444333422  33466678887789999876666 56788776532  2334556677777764322  333333


Q ss_pred             ee------EeCCcceEEEecCCCCCHH-----------Hhhhc--CCCCCC-----------CHHHHH------------
Q 024659          121 CC------CEGDERLLVAEYMPNDTLA-----------KHLFH--WETQPM-----------KWAMRL------------  158 (264)
Q Consensus       121 ~~------~~~~~~~lv~e~~~~~sL~-----------~~l~~--~~~~~~-----------~~~~~~------------  158 (264)
                      ..      ...+..+++++|++|..+.           ..+..  .....+           .|....            
T Consensus        85 t~~g~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~  164 (307)
T TIGR00938        85 SRDGRQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEA  164 (307)
T ss_pred             CCCCCeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCH
Confidence            21      1134568899999885432           11110  000000           111100            


Q ss_pred             HHHHHHHHHHHHHhc------CCCceeeccCCCCeeeCCCCCeEEcccCCCccc
Q 024659          159 RVALHIAEALEYCTS------KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (264)
Q Consensus       159 ~i~~qi~~~l~~lh~------~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~  206 (264)
                      .....+...+.++..      ..+++|+|+++.|++++.++...|+||+.+...
T Consensus       165 ~~~~~l~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~~  218 (307)
T TIGR00938       165 HMGAELDKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACTD  218 (307)
T ss_pred             HHHHHHHHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeecccccCc
Confidence            001122233444422      138999999999999998887789999987643

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.83  E-value=0.00069  Score=56.53  Aligned_cols=140  Identities=14%  Similarity=0.175  Sum_probs=82.0

Q ss_pred             cccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCC--cccccee------eEeCCcceEEEe
Q 024659           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR--LANLLGC------CCEGDERLLVAE  133 (264)
Q Consensus        62 l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~~~~------~~~~~~~~lv~e  133 (264)
                      ++.+..|....+|+....++ .+++|.....   ....+..|++++..+.+.+  +.+++..      ....+..+++++
T Consensus        19 i~~i~~G~~n~~y~v~~~~~-~~vLr~~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~   94 (296)
T cd05153          19 FEGISAGIENTNYFVTTDSG-RYVLTLFEKV---SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVE   94 (296)
T ss_pred             eecccCccccceEEEEeCCC-cEEEEEcCCC---ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEE
Confidence            55677888889999876555 6888887652   2345666777777775333  3333331      122345688999


Q ss_pred             cCCCCCHHH-----------hhhc----CCC--------CCCCHHHHH----------HHHHHHHHHHHHHhc------C
Q 024659          134 YMPNDTLAK-----------HLFH----WET--------QPMKWAMRL----------RVALHIAEALEYCTS------K  174 (264)
Q Consensus       134 ~~~~~sL~~-----------~l~~----~~~--------~~~~~~~~~----------~i~~qi~~~l~~lh~------~  174 (264)
                      +++|..+..           .+..    ...        ....|....          .....+..++.++..      .
T Consensus        95 ~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~  174 (296)
T cd05153          95 FLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLP  174 (296)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCC
Confidence            998866422           1100    000        001111100          011112233333332      1


Q ss_pred             CCceeeccCCCCeeeCCCCCeEEcccCCCcc
Q 024659          175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (264)
Q Consensus       175 ~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~  205 (264)
                      .+++|+|++|.||++++++.+.|+||+.+..
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence            3799999999999999887789999998764

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.83  E-value=0.00025  Score=55.29  Aligned_cols=125  Identities=20%  Similarity=0.252  Sum_probs=87.1

Q ss_pred             ccccccccCCCCCC-CeEEEEEeCCCCEEEEEEeCC---CCC------------------hhHHHHHHHHHHHhcCC---
Q 024659           57 AMENIVSEHGEKAP-NVVYKGKLENQFRIAVKRFNR---SAW------------------PDARQFLEEARAVGQLR---  111 (264)
Q Consensus        57 ~~~~~l~~lg~G~~-g~Vy~~~~~~~~~vavK~~~~---~~~------------------~~~~~~~~e~~~l~~l~---  111 (264)
                      .+.+.++.||.|.- |.||++...+. .+|+|....   ...                  .....|..|-+...+|+   
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~g~-~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~  115 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEIDGR-IYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG  115 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEECCe-EEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence            55778888999999 99999998665 899999321   100                  11234778888877775   


Q ss_pred             CCCc--cccceeeEeCC------------------cceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Q 024659          112 NRRL--ANLLGCCCEGD------------------ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC  171 (264)
Q Consensus       112 h~~i--~~~~~~~~~~~------------------~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l  171 (264)
                      +.++  ++++|+..-..                  ...||.||++...           .++.    .-+.+|.+-+..+
T Consensus       116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~~~~----~~~~~~~~dl~~~  180 (207)
T PF13095_consen  116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------PLQI----RDIPQMLRDLKIL  180 (207)
T ss_pred             ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------ccch----hHHHHHHHHHHHH
Confidence            3455  88888873321                  1356777665432           1222    2356777778889


Q ss_pred             hcCCCceeeccCCCCeeeCCCCCeEEcccCCC
Q 024659          172 TSKERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (264)
Q Consensus       172 h~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~  203 (264)
                      |.. ||+-+|+++.|..     .-+|+|||.+
T Consensus       181 ~k~-gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  181 HKL-GIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             HHC-CeeeccCcccccc-----CCEEEecccC
Confidence            999 9999999999987     4588999864

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=97.81  E-value=0.00057  Score=57.24  Aligned_cols=154  Identities=14%  Similarity=0.110  Sum_probs=88.8

Q ss_pred             CCCccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCC--CCChhHHHHHHHHHHHhcCCC--CCccccceeeEeCC--c
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNR--SAWPDARQFLEEARAVGQLRN--RRLANLLGCCCEGD--E  127 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~--~  127 (264)
                      ..+....++.++..|....+|..... ++.++++ .+.  ..........+|+++++.+--  .-....++.|..+.  .
T Consensus        22 p~~~~~~~v~~~~~G~sn~t~~~~~~-~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~   99 (321)
T COG3173          22 PGYAGLLIVEEISGGWSNDTFRLGDT-GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGT   99 (321)
T ss_pred             cCcCCCceeeeccCCcccceEEEecC-CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCC
Confidence            33455556666655655566655544 6678888 332  233445667788888888843  33455666676655  6


Q ss_pred             ceEEEecCCCCCHHHh------------------hhcC-----C-----C--CCCCHHHHHHHHHHH-------------
Q 024659          128 RLLVAEYMPNDTLAKH------------------LFHW-----E-----T--QPMKWAMRLRVALHI-------------  164 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~------------------l~~~-----~-----~--~~~~~~~~~~i~~qi-------------  164 (264)
                      .+.||+|++|..+.+.                  |...     .     .  ......++..+..+.             
T Consensus       100 pf~v~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~  179 (321)
T COG3173         100 PFYVMEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPL  179 (321)
T ss_pred             ceEEEEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCch
Confidence            7899999988422221                  1100     0     0  000111111111111             


Q ss_pred             -HHHHHHHhcC-------CCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC
Q 024659          165 -AEALEYCTSK-------ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       165 -~~~l~~lh~~-------~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~  209 (264)
                       ..-..+++.+       ..++|+|+.+.|++++.++-+-|+||+++....+.
T Consensus       180 ~~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP~  232 (321)
T COG3173         180 ADRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGDPL  232 (321)
T ss_pred             HHHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccCCcH
Confidence             1112233222       35899999999999998888999999998865543

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.79  E-value=0.00031  Score=58.88  Aligned_cols=74  Identities=23%  Similarity=0.299  Sum_probs=47.5

Q ss_pred             ccCCCCCCCeEEEEEeCC-------CCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCcc-ccceeeEeCCcceEEEec
Q 024659           63 SEHGEKAPNVVYKGKLEN-------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLA-NLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e~  134 (264)
                      +.+..|-...+|+....+       ++.+++|...... .......+|.+++..+...++. +++..+.    -.+|++|
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~----~~~v~e~   78 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFP----NGRIEEF   78 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeC----CCchhhe
Confidence            345667778999998654       5788999876543 2233456788888888544433 4444432    2468899


Q ss_pred             CCCCCHH
Q 024659          135 MPNDTLA  141 (264)
Q Consensus       135 ~~~~sL~  141 (264)
                      ++|.++.
T Consensus        79 i~G~~l~   85 (302)
T cd05156          79 IPSRTLT   85 (302)
T ss_pred             eCCCcCC
Confidence            8886654

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=97.71  E-value=0.00056  Score=56.58  Aligned_cols=34  Identities=21%  Similarity=0.189  Sum_probs=27.5

Q ss_pred             CceeeccCCCCeeeCCCCC-eEEcccCCCcccCCC
Q 024659          176 RALYHDLNAYRIVFDDDVN-PRLSCFGLMKNSRDG  209 (264)
Q Consensus       176 ~i~H~dl~~~Nil~~~~~~-~kl~dfg~~~~~~~~  209 (264)
                      .++|+|+++.||++++++. .-|+||+.+....+.
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iGDPa  220 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKVGDPA  220 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhcccCCHH
Confidence            4899999999999997555 569999988765443

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PLN02756 S-methyl-5-thioribose kinase

Probab=97.70  E-value=0.00095  Score=57.77  Aligned_cols=74  Identities=16%  Similarity=0.146  Sum_probs=50.9

Q ss_pred             ccccCCCCCCCeEEEEEeCCCCEEEEEEeCCC-----C-C-hhHHHHHHHHHHHhcCC---CCCccccceeeEeCCcceE
Q 024659           61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRS-----A-W-PDARQFLEEARAVGQLR---NRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        61 ~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-----~-~-~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~l  130 (264)
                      .++++|.|....||+....+ ..++||.-...     . + ....+...|++.|+.+.   ..++.+++.++.  +..++
T Consensus        36 ~~~eiggGn~N~VyrV~~~~-~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vl  112 (418)
T PLN02756         36 KIKEVGDGNLNFVYIVVSSS-GSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALI  112 (418)
T ss_pred             eEEEcCCCceeeEEEEEcCC-ccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEE
Confidence            46678999999999988754 46888887621     1 1 13344555677776663   246778888875  45678


Q ss_pred             EEecCCC
Q 024659          131 VAEYMPN  137 (264)
Q Consensus       131 v~e~~~~  137 (264)
                      +||++++
T Consensus       113 vME~L~~  119 (418)
T PLN02756        113 GMRYLEP  119 (418)
T ss_pred             EEeecCC
Confidence            8999966

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=97.70  E-value=0.00064  Score=57.53  Aligned_cols=141  Identities=16%  Similarity=0.145  Sum_probs=98.5

Q ss_pred             ccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCC------C---------------Chh-----HHHHHHHHHHHhcCCC
Q 024659           59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRS------A---------------WPD-----ARQFLEEARAVGQLRN  112 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~------~---------------~~~-----~~~~~~e~~~l~~l~h  112 (264)
                      .++-+.|..|--+-||.+.-.+|..+|+|+++..      .               ...     .-.+.+|++-|.++..
T Consensus       146 ~~inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~  225 (520)
T KOG2270|consen  146 VEINGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN  225 (520)
T ss_pred             eecccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh
Confidence            3455667778888999999999999999998531      0               000     1134578888888877


Q ss_pred             CCccccceeeEeCCcceEEEecCCCCCHH-HhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC
Q 024659          113 RRLANLLGCCCEGDERLLVAEYMPNDTLA-KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD  191 (264)
Q Consensus       113 ~~i~~~~~~~~~~~~~~lv~e~~~~~sL~-~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~  191 (264)
                      ..|.-.--+...  ...|||+++...... -.|   +.-.++...+..+-.|++.-+.-|.+..++||.||+--|+|+- 
T Consensus       226 aGIP~PePIlLk--~hVLVM~FlGrdgw~aPkL---Kd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Lyh-  299 (520)
T KOG2270|consen  226 AGIPCPEPILLK--NHVLVMEFLGRDGWAAPKL---KDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLYH-  299 (520)
T ss_pred             cCCCCCCceeee--cceEeeeeccCCCCcCccc---ccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheEE-
Confidence            765544443332  246899998643221 111   3445676778888888888888887777999999999999885 


Q ss_pred             CCCeEEcccCCCcc
Q 024659          192 DVNPRLSCFGLMKN  205 (264)
Q Consensus       192 ~~~~kl~dfg~~~~  205 (264)
                      +|.+.++|-+-+..
T Consensus       300 dG~lyiIDVSQSVE  313 (520)
T KOG2270|consen  300 DGKLYIIDVSQSVE  313 (520)
T ss_pred             CCEEEEEEcccccc
Confidence            67889999876543

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=97.69  E-value=8.9e-05  Score=61.54  Aligned_cols=148  Identities=14%  Similarity=0.092  Sum_probs=96.4

Q ss_pred             CHHHHHHHhCCCccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCC--------------------CChhH--HHHHH
Q 024659           45 SIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRS--------------------AWPDA--RQFLE  102 (264)
Q Consensus        45 ~~~~~~~~~~~~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--------------------~~~~~--~~~~~  102 (264)
                      ++--|..-.+.-.-+.+-.+||-|--+-||.+.+..|...++|.-+..                    +|...  -...+
T Consensus        80 DyLAlktL~~R~~v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~k  159 (465)
T KOG2268|consen   80 DYLALKTLSNRGSVESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATK  159 (465)
T ss_pred             hHHHHHHHHhcchhhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHH
Confidence            334444444443445566788999999999999998888888764211                    11111  23567


Q ss_pred             HHHHHhcCCCC--CccccceeeEeCCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceee
Q 024659          103 EARAVGQLRNR--RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH  180 (264)
Q Consensus       103 e~~~l~~l~h~--~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~  180 (264)
                      |+..++.|...  -+.+.+++..    .++|||++.+-.|...-.     --+.+++.   ..+..-+--|-.. |+||+
T Consensus       160 EfafmkaL~e~gfpVPkpiD~~R----H~Vvmelv~g~Pl~~v~~-----v~d~~~ly---~~lm~~Iv~la~~-GlIHg  226 (465)
T KOG2268|consen  160 EFAFMKALYERGFPVPKPIDHNR----HCVVMELVDGYPLRQVRH-----VEDPPTLY---DDLMGLIVRLANH-GLIHG  226 (465)
T ss_pred             HHHHHHHHHHcCCCCCCcccccc----eeeHHHhhcccceeeeee-----cCChHHHH---HHHHHHHHHHHHc-Cceec
Confidence            88888888532  2555555543    478999998888776432     11222222   2233333444556 99999


Q ss_pred             ccCCCCeeeCCCCCeEEcccCCCcc
Q 024659          181 DLNAYRIVFDDDVNPRLSCFGLMKN  205 (264)
Q Consensus       181 dl~~~Nil~~~~~~~kl~dfg~~~~  205 (264)
                      |.+--||++++++.++++||.-+-.
T Consensus       227 DFNEFNimv~dd~~i~vIDFPQmvS  251 (465)
T KOG2268|consen  227 DFNEFNIMVKDDDKIVVIDFPQMVS  251 (465)
T ss_pred             ccchheeEEecCCCEEEeechHhhc
Confidence            9999999999999999999986543

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=97.46  E-value=0.0023  Score=54.46  Aligned_cols=72  Identities=14%  Similarity=0.050  Sum_probs=47.6

Q ss_pred             cCCCCCCCeEEEEEeCCC-CEEEEEEeCC------CC-ChhHHHHHHHHHHHhcCC--CC-CccccceeeEeCCcceEEE
Q 024659           64 EHGEKAPNVVYKGKLENQ-FRIAVKRFNR------SA-WPDARQFLEEARAVGQLR--NR-RLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~~-~~vavK~~~~------~~-~~~~~~~~~e~~~l~~l~--h~-~i~~~~~~~~~~~~~~lv~  132 (264)
                      ++|.|....||++...++ +.|+||.-.+      .+ +-..++..-|.+.|+...  -| .+.+++.+  ++....+||
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~~~~vM   79 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTEMAVTVM   79 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--ccccceehH
Confidence            579999999999997654 6889887542      11 223456667888887763  24 34444443  455667899


Q ss_pred             ecCCC
Q 024659          133 EYMPN  137 (264)
Q Consensus       133 e~~~~  137 (264)
                      |+++.
T Consensus        80 EdL~~   84 (370)
T TIGR01767        80 EDLSH   84 (370)
T ss_pred             hhCcc
Confidence            98854

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.39  E-value=0.00068  Score=64.77  Aligned_cols=150  Identities=18%  Similarity=0.099  Sum_probs=110.1

Q ss_pred             HHHHHHHHhcCCCCCccccceeeEeCCc----ceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 024659          100 FLEEARAVGQLRNRRLANLLGCCCEGDE----RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE  175 (264)
Q Consensus       100 ~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~  175 (264)
                      ..-|...+.++.|+|+..++.+......    ..+..+++...++...+.  .-..++..+.+.+..+...|+.++|+. 
T Consensus       229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q--~v~~i~~~~~r~~~~~~~~GL~~~h~~-  305 (1351)
T KOG1035|consen  229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQ--SVGSIPLETLRILHQKLLEGLAYLHSL-  305 (1351)
T ss_pred             HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHh--hccccCHHHHHHHHHHHhhhHHHHHHh-
Confidence            3457778889999999999998765432    234557788888888775  345678889999999999999999998 


Q ss_pred             CceeeccCCC---CeeeCCCCCeEEc--ccCCCcccCCCC---cccccccccccccccCCCCC--CccceechHHHHHHH
Q 024659          176 RALYHDLNAY---RIVFDDDVNPRLS--CFGLMKNSRDGR---SYSTNLAFTPPEYLRTGRVT--PESVMYSFGTLLLDL  245 (264)
Q Consensus       176 ~i~H~dl~~~---Nil~~~~~~~kl~--dfg~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~--~~~DiwslG~~l~el  245 (264)
                      ...|.-+..+   +...+..+....+  ||+.........   ....+..+.++|........  ...|+|.+|..+..+
T Consensus       306 ~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~  385 (1351)
T KOG1035|consen  306 SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQL  385 (1351)
T ss_pred             ccceeEEecccccccccCccceeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHHHHHhhh
Confidence            7777666555   5555556666666  888776554332   22345667888888766644  458999999999999


Q ss_pred             HhCCCCC
Q 024659          246 LSGKHIP  252 (264)
Q Consensus       246 ~~g~~~~  252 (264)
                      ..|..+.
T Consensus       386 ~~~~~i~  392 (1351)
T KOG1035|consen  386 SQGEDIS  392 (1351)
T ss_pred             hhcCccc
Confidence            9988764

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=97.37  E-value=0.00085  Score=55.69  Aligned_cols=75  Identities=17%  Similarity=0.166  Sum_probs=46.1

Q ss_pred             cccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC---CCCccccceeeEeCCcceEEEecCC
Q 024659           60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR---NRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        60 ~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      +-++.++.|....+|+.. .+++.+.+|.-...   ....+..|++-|+.|.   .-.+.+++++....+..+|++||++
T Consensus        20 ~~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~~~---~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~   95 (288)
T PF03881_consen   20 TSIEPVSGGDINEAYRLD-TDGGSYFVKVNSES---GRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLE   95 (288)
T ss_dssp             -EEEEE--SSSSEEEEEE-TTS-EEEEEEEEGG---GCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE---
T ss_pred             eeeEecCCCChhheEEEE-CCCccEEEEecChh---hHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeec
Confidence            344566889999999887 55668888887632   2344667777777773   4457788888877777899999987


Q ss_pred             CC
Q 024659          137 ND  138 (264)
Q Consensus       137 ~~  138 (264)
                      .+
T Consensus        96 ~~   97 (288)
T PF03881_consen   96 MG   97 (288)
T ss_dssp             --
T ss_pred             CC
Confidence            65

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PLN02236 choline kinase

Probab=97.32  E-value=0.0025  Score=54.48  Aligned_cols=142  Identities=15%  Similarity=0.098  Sum_probs=82.0

Q ss_pred             ccccCCCCCCCeEEEEEeCC-----CCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCcc-ccceeeEeCCcceEEEec
Q 024659           61 IVSEHGEKAPNVVYKGKLEN-----QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLA-NLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        61 ~l~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e~  134 (264)
                      -+..+..|-...+|+....+     ++.+++|.......... ...+|..+++.+...++. ++++.+..    ..|.+|
T Consensus        40 ~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~i-dR~~E~~~~~~l~~~gl~P~~~~~~~~----g~v~ef  114 (344)
T PLN02236         40 QVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFF-DRDDEIRTFECMSRHGQGPRLLGRFPN----GRVEEF  114 (344)
T ss_pred             EEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeee-chHHHHHHHHHHHHcCCCCceEEEECC----ceEEEe
Confidence            34455668888999987532     36788998766542222 236788888888654444 44444422    257899


Q ss_pred             CCCCCHHHh--------------hh--cC---CCC--CCCHHHHHHHHHHHH-----------------HHHHH----Hh
Q 024659          135 MPNDTLAKH--------------LF--HW---ETQ--PMKWAMRLRVALHIA-----------------EALEY----CT  172 (264)
Q Consensus       135 ~~~~sL~~~--------------l~--~~---~~~--~~~~~~~~~i~~qi~-----------------~~l~~----lh  172 (264)
                      +++.++...              +.  +.   ...  ...+..+..+..++.                 ..+..    +.
T Consensus       115 i~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~  194 (344)
T PLN02236        115 IHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELS  194 (344)
T ss_pred             eCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhc
Confidence            877665421              00  00   000  111333333332221                 11111    11


Q ss_pred             c---CCCceeeccCCCCeeeCC-CCCeEEcccCCCcccC
Q 024659          173 S---KERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSR  207 (264)
Q Consensus       173 ~---~~~i~H~dl~~~Nil~~~-~~~~kl~dfg~~~~~~  207 (264)
                      .   ...++|+|+++.||++++ ++.+.++||..+....
T Consensus       195 ~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~~  233 (344)
T PLN02236        195 GDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASYNP  233 (344)
T ss_pred             ccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccccc
Confidence            1   125899999999999986 4789999999887543

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=97.26  E-value=0.00088  Score=56.62  Aligned_cols=103  Identities=14%  Similarity=0.047  Sum_probs=69.0

Q ss_pred             cceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCccc
Q 024659          127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (264)
Q Consensus       127 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~  206 (264)
                      ..+++|++- |+++.. +     ..-.+.++..++.+.+..++-+..+..+-|||+.-.||+|+ +|++-|+||-+++..
T Consensus       300 y~yl~~kdh-gt~is~-i-----k~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl~  371 (488)
T COG5072         300 YLYLHFKDH-GTPISI-I-----KADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRLS  371 (488)
T ss_pred             EEEEEEecC-Cceeee-e-----ecccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeecc
Confidence            456677764 444432 2     23567889999999999888888777889999999999999 999999999999854


Q ss_pred             CCCCcccccccccccccccCCCCCCccceechH
Q 024659          207 RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFG  239 (264)
Q Consensus       207 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG  239 (264)
                      .... ......+--|-.+.| .-+.+-+||-+-
T Consensus       372 ~~q~-~isy~rldhp~lF~G-~dd~QFeIYrlM  402 (488)
T COG5072         372 YSQG-IISYNRLDHPDLFNG-VDDYQFEIYRLM  402 (488)
T ss_pred             cCCc-eeeccccCchhhhcC-ccceeeeHHHHH
Confidence            3322 221222233444442 225556665443

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=97.15  E-value=0.0053  Score=52.20  Aligned_cols=141  Identities=16%  Similarity=0.169  Sum_probs=79.3

Q ss_pred             cccCCCCCCCeEEEEEeCC----CCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCcc-ccceeeEeCCcceEEEecCC
Q 024659           62 VSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLA-NLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        62 l~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e~~~  136 (264)
                      ++.+..|-...+|+....+    +..+++|....... ..-...+|..+++.+...++. ++++++.  +  .+|.+|++
T Consensus        19 i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~-~~IdR~~E~~il~~l~~~gl~P~~l~~~~--~--G~i~~fi~   93 (330)
T PLN02421         19 VERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTD-YVIDRERELQAIKYLSAAGFGAKLLGVFG--N--GMIQSFIN   93 (330)
T ss_pred             EEEeCCcccceEEEEEecCCCCCCceEEEEEecCCcC-eEechHHHHHHHHHHHhcCCCCceeEEeC--C--cEeehhhc
Confidence            3445557778899887543    23788888765432 222345788888888655554 4444442  2  25888887


Q ss_pred             CCCHHH--------------hhhcCCC------C-CCCHHHHHHHHHHH-------------------------HHHHHH
Q 024659          137 NDTLAK--------------HLFHWET------Q-PMKWAMRLRVALHI-------------------------AEALEY  170 (264)
Q Consensus       137 ~~sL~~--------------~l~~~~~------~-~~~~~~~~~i~~qi-------------------------~~~l~~  170 (264)
                      +.+|..              .++....      . +-.+..+..+..++                         +..+..
T Consensus        94 g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~  173 (330)
T PLN02421         94 ARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKE  173 (330)
T ss_pred             CCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHH
Confidence            765421              1111001      0 11133333332222                         111111


Q ss_pred             Hh-cC---CCceeeccCCCCeeeCC-CCCeEEcccCCCcccC
Q 024659          171 CT-SK---ERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSR  207 (264)
Q Consensus       171 lh-~~---~~i~H~dl~~~Nil~~~-~~~~kl~dfg~~~~~~  207 (264)
                      +. ..   .-++|+|+.+.||++++ ++.++++||..+....
T Consensus       174 ~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd  215 (330)
T PLN02421        174 ITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSY  215 (330)
T ss_pred             HhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCCc
Confidence            21 11   13799999999999975 5789999999887543

>PRK12396 5-methylribose kinase; Reviewed

Probab=97.02  E-value=0.0052  Score=53.04  Aligned_cols=75  Identities=13%  Similarity=0.082  Sum_probs=49.3

Q ss_pred             ccccCCCCCCCeEEEEEeC-CCCEEEEEEeCC-----CC-ChhHHHHHHHHHHHhcCC--CC-CccccceeeEeCCcceE
Q 024659           61 IVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNR-----SA-WPDARQFLEEARAVGQLR--NR-RLANLLGCCCEGDERLL  130 (264)
Q Consensus        61 ~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~-----~~-~~~~~~~~~e~~~l~~l~--h~-~i~~~~~~~~~~~~~~l  130 (264)
                      .+.+||.|....||++.+. +++.|+||.-.+     .+ +-..++..-|.+.|+...  .| ++.+++.+  ++....+
T Consensus        33 ~~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e~~~~  110 (409)
T PRK12396         33 QCKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSVMNCC  110 (409)
T ss_pred             eeeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcHHhhH
Confidence            3668899999999999974 356788887532     12 223566777888888763  34 34445544  4445667


Q ss_pred             EEecCCC
Q 024659          131 VAEYMPN  137 (264)
Q Consensus       131 v~e~~~~  137 (264)
                      |||+++.
T Consensus       111 vMEdL~~  117 (409)
T PRK12396        111 VMEDLSD  117 (409)
T ss_pred             HHHhCcc
Confidence            8887743

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=96.97  E-value=0.013  Score=49.09  Aligned_cols=29  Identities=14%  Similarity=0.036  Sum_probs=25.6

Q ss_pred             CceeeccCCCCeeeCCCCCeEEcccCCCcc
Q 024659          176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (264)
Q Consensus       176 ~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~  205 (264)
                      +++|+|+++.||+++. +.+.|+||+.+..
T Consensus       188 ~liHgD~~~~Nil~~~-~~i~lIDfd~~~~  216 (313)
T TIGR02906       188 GFCHQDYAYHNILLKD-NEVYVIDFDYCTI  216 (313)
T ss_pred             ceEcCCCCcccEEEeC-CcEEEEECccccc
Confidence            7899999999999987 6789999997654

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.82  E-value=0.018  Score=45.78  Aligned_cols=74  Identities=22%  Similarity=0.249  Sum_probs=47.9

Q ss_pred             cCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC---CCCccccceeeEeCCcceEEEecCCCCCH
Q 024659           64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR---NRRLANLLGCCCEGDERLLVAEYMPNDTL  140 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~sL  140 (264)
                      ++.-|.-...|...+ +...+.+|+-...   ....|..|+.-|..+.   .-.+.+++.+.....+.++|++|++.+.+
T Consensus        23 ~v~gG~inea~~v~d-g~~~~FvK~n~~~---~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~   98 (286)
T COG3001          23 EVSGGDINEAWRLRD-GTDPFFVKCNQRE---QLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPL   98 (286)
T ss_pred             ccCCccccceeEeec-CCcceEEEecchh---hHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCC
Confidence            344455444554443 3447778875432   2344666776666664   45677888888888899999999987655


Q ss_pred             H
Q 024659          141 A  141 (264)
Q Consensus       141 ~  141 (264)
                      .
T Consensus        99 d   99 (286)
T COG3001          99 D   99 (286)
T ss_pred             C
Confidence            4

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=96.80  E-value=0.015  Score=49.30  Aligned_cols=145  Identities=16%  Similarity=0.252  Sum_probs=82.9

Q ss_pred             CccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCc------ccccee----eEeC
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL------ANLLGC----CCEG  125 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i------~~~~~~----~~~~  125 (264)
                      +.....+..|.+ .-..+|+....+|+. ++|.....  ....++..|...+..|....|      ...-|-    ...+
T Consensus        25 ~g~~~~~~~l~s-~eN~~f~~~~~~g~~-iLki~~~~--~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~  100 (331)
T COG2334          25 YGLDGSLRGLNS-EENSNFRVQTEDGRY-ILKIYRPG--WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGG  100 (331)
T ss_pred             cCcccccccccc-ccCceEEEEecCCCe-EEEEecCC--CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCC
Confidence            333344444555 456799999888866 88888775  234456667777777743222      212111    1111


Q ss_pred             CcceEEEecCCCCCHHH-hhh------------------cCC--C----CCCCHHH-------------HHHHHHHHHHH
Q 024659          126 DERLLVAEYMPNDTLAK-HLF------------------HWE--T----QPMKWAM-------------RLRVALHIAEA  167 (264)
Q Consensus       126 ~~~~lv~e~~~~~sL~~-~l~------------------~~~--~----~~~~~~~-------------~~~i~~qi~~~  167 (264)
                      ...+-+++|++|..+.. ...                  ...  .    ....|..             ......++...
T Consensus       101 ~r~a~lf~~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~  180 (331)
T COG2334         101 PRPAALFEYLPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAA  180 (331)
T ss_pred             ceeEEEEEecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHH
Confidence            25677899999877762 110                  000  0    0112220             00123333334


Q ss_pred             HHHHhcC-------CC--ceeeccCCCCeeeCCCCC-eEEcccCCCc
Q 024659          168 LEYCTSK-------ER--ALYHDLNAYRIVFDDDVN-PRLSCFGLMK  204 (264)
Q Consensus       168 l~~lh~~-------~~--i~H~dl~~~Nil~~~~~~-~kl~dfg~~~  204 (264)
                      +..+.+.       .+  +||+|+.|.||+++.+.. .-++||+-+.
T Consensus       181 ~~~~~~~~~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         181 LDRLLARLPAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             HHHHHhhchhhCCcccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence            4333321       13  899999999999998874 8999999876

>PRK11768 serine/threonine protein kinase; Provisional

Probab=96.72  E-value=0.067  Score=45.40  Aligned_cols=96  Identities=16%  Similarity=0.091  Sum_probs=52.9

Q ss_pred             cccCHHHHHHHhCCC--ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCc--cc
Q 024659           42 CEYSIETLRTATSGF--AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL--AN  117 (264)
Q Consensus        42 ~~~~~~~~~~~~~~~--~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i--~~  117 (264)
                      ...+.+.+..+...+  .....+..|+. .-..||+...+++..+++|..+... .....+..|.+.+..|....+  +.
T Consensus         9 ~~l~p~~~~~a~~~~g~~~~~~~~~l~s-~eN~vy~v~~~~~~~~vlKv~r~~~-~~~~~i~~E~~~l~~L~~~gipv~~   86 (325)
T PRK11768          9 QTLTPDLILDALESLGLRVDGRLLALNS-YENRVYQFGDEDGRRVVAKFYRPER-WSDAQILEEHAFALELAEAEIPVVA   86 (325)
T ss_pred             CCCChHHHHHHHHHcCCCCccceEeecc-ccceEEEEecCCCCEEEEEEcCccc-CCHHHHHHHHHHHHHHHHCCCCCCC
Confidence            344555554444333  22222233433 3357999998888789999886443 234556677777776643222  22


Q ss_pred             cc---e--eeEeCCcceEEEecCCCCC
Q 024659          118 LL---G--CCCEGDERLLVAEYMPNDT  139 (264)
Q Consensus       118 ~~---~--~~~~~~~~~lv~e~~~~~s  139 (264)
                      ..   |  +...++..+.++++++|..
T Consensus        87 p~~~~G~~~~~~~g~~~~l~~~~~G~~  113 (325)
T PRK11768         87 PLAFNGQTLHEHQGFRFALFPRRGGRA  113 (325)
T ss_pred             CccCCCCEEEEECCEEEEEEeeeCCCC
Confidence            11   1  1122345677888887753

>PTZ00384 choline kinase; Provisional

Probab=96.63  E-value=0.015  Score=50.46  Aligned_cols=76  Identities=12%  Similarity=0.165  Sum_probs=45.2

Q ss_pred             ccccCCCCCCCeEEEEEeCCC--C-----EEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCcc-ccceeeEeCCcceEEE
Q 024659           61 IVSEHGEKAPNVVYKGKLENQ--F-----RIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLA-NLLGCCCEGDERLLVA  132 (264)
Q Consensus        61 ~l~~lg~G~~g~Vy~~~~~~~--~-----~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~  132 (264)
                      .++.+..|-.+.+|++...++  .     .|+++.... .....-.-.+|+++++.+...++. ++++.+.    -+++.
T Consensus        54 ~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~-~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~----~g~l~  128 (383)
T PTZ00384         54 EIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSST-YNSLVIDNDLQYNIAKLLGDNNFGPKIIGRFG----DFTIQ  128 (383)
T ss_pred             EEEEeCCcccceEEEEEecCCCCCccccceEEEEeccC-CCceEeccHHHHHHHHHHHhCCCCCeEEEecC----CEEEE
Confidence            455666688889999975432  1     244443322 211112235688899998765554 4444442    26899


Q ss_pred             ecCCCCCHH
Q 024659          133 EYMPNDTLA  141 (264)
Q Consensus       133 e~~~~~sL~  141 (264)
                      ||++|.+|.
T Consensus       129 efIeGr~l~  137 (383)
T PTZ00384        129 EWVEGNTMG  137 (383)
T ss_pred             EEeccccCC
Confidence            999887654

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=96.49  E-value=0.073  Score=44.75  Aligned_cols=34  Identities=9%  Similarity=0.072  Sum_probs=29.5

Q ss_pred             CCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       175 ~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      .+++|+|+.+.|++++.++.+.++||..+.....
T Consensus       196 ~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~d~~  229 (309)
T TIGR02904       196 TVLVHGKLSLSHFLYDETRGGYFINFEKASFASP  229 (309)
T ss_pred             eeeeCCCCcHHhEEEcCCCCEEEEEhhhcccCCc
Confidence            3799999999999999999999999998875443

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PRK06148 hypothetical protein; Provisional

Probab=96.39  E-value=0.12  Score=50.76  Aligned_cols=149  Identities=17%  Similarity=0.202  Sum_probs=80.3

Q ss_pred             CCCccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcC-------CCCCccccc-ee----
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-------RNRRLANLL-GC----  121 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~-~~----  121 (264)
                      ..|....-++.|+. .....|+....++..+++|+.+.....  .....+.+.+..|       .-|.+++.. +-    
T Consensus        22 ~~ygl~~~~~~L~s-~~d~nf~v~~~~g~~yVLKi~~~~~~~--~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~   98 (1013)
T PRK06148         22 QHFGISATATPLDG-ERDLNFRLTTDDGADYILKIVNPSEPR--VESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLAS   98 (1013)
T ss_pred             HHcCCceEEeecCC-cCCceEEEEeCCCCeEEEEEcCCccch--hHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEE
Confidence            33443334456653 457899998888888999999865322  2233344455444       223333221 11    


Q ss_pred             eEe-CC--cceEEEecCCCCCHHHhh-------h--------------cCC----CCCCCHH-----------------H
Q 024659          122 CCE-GD--ERLLVAEYMPNDTLAKHL-------F--------------HWE----TQPMKWA-----------------M  156 (264)
Q Consensus       122 ~~~-~~--~~~lv~e~~~~~sL~~~l-------~--------------~~~----~~~~~~~-----------------~  156 (264)
                      ... +.  ..+-+++|++|..+.+..       .              ...    .+.+.|.                 .
T Consensus        99 v~~~~G~~~~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~Wdl~~~~~l~~~l~~i~d~~  178 (1013)
T PRK06148         99 AQDPDGEPRLLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDWDLRHAGRARDRLHFIDDPE  178 (1013)
T ss_pred             eecCCCceEEEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccchhhhhhhhhcCCHH
Confidence            111 11  356689999987765410       0              000    1112221                 1


Q ss_pred             HHHHHHHHHHHHH-----HHhcC-CCceeeccCCCCeeeCCCC--CeE-EcccCCCcc
Q 024659          157 RLRVALHIAEALE-----YCTSK-ERALYHDLNAYRIVFDDDV--NPR-LSCFGLMKN  205 (264)
Q Consensus       157 ~~~i~~qi~~~l~-----~lh~~-~~i~H~dl~~~Nil~~~~~--~~k-l~dfg~~~~  205 (264)
                      ...++.+++..+.     .+... .++||+|+++.||+++.++  .+. |+|||.+..
T Consensus       179 ~r~~l~~~~~~~~~~v~p~l~~Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~  236 (1013)
T PRK06148        179 DRALVERFLARFERNVAPRLAALPAQVIHNDANDYNILVDADDGERISGLIDFGDAVH  236 (1013)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCcceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence            1222333333222     12111 2799999999999999774  454 999998764

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=96.34  E-value=0.00047  Score=67.73  Aligned_cols=151  Identities=10%  Similarity=-0.109  Sum_probs=105.1

Q ss_pred             HHHHHHhcCCCCCccccceeeEe--CCcceEEEecCCCCCHHHhhhcCCC--CCCCHHHHHHHHHHHHHHHHHHhcCCC-
Q 024659          102 EEARAVGQLRNRRLANLLGCCCE--GDERLLVAEYMPNDTLAKHLFHWET--QPMKWAMRLRVALHIAEALEYCTSKER-  176 (264)
Q Consensus       102 ~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~sL~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lh~~~~-  176 (264)
                      .|..-++...|+++.....-...  ....+..++|+.+|.+.+.+-+...  .+....-+.....+.......+|+..+ 
T Consensus      1278 ~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnl 1357 (2724)
T KOG1826|consen 1278 SERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNL 1357 (2724)
T ss_pred             hhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccC
Confidence            34444555678877666555432  3356889999999999998865432  223222232333333555555555422 


Q ss_pred             ---ceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC----cccccccccccccccCCCCCCccceechHHHHHHHHhCC
Q 024659          177 ---ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK  249 (264)
Q Consensus       177 ---i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~  249 (264)
                         -+|+++++.|.+|..+..+++.++|+.+...+..    ...+++-|++|+....-.++.++|+|..++-+|+..-|.
T Consensus      1358 g~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n 1437 (2724)
T KOG1826|consen 1358 GNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGN 1437 (2724)
T ss_pred             CccchhhhhhhhccceecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhccc
Confidence               5789999999999999999999999998433332    235567788888887777888899999999999988887


Q ss_pred             CCC
Q 024659          250 HIP  252 (264)
Q Consensus       250 ~~~  252 (264)
                      ++|
T Consensus      1438 ~~f 1440 (2724)
T KOG1826|consen 1438 AYF 1440 (2724)
T ss_pred             HHH
Confidence            765

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=96.24  E-value=0.027  Score=44.70  Aligned_cols=112  Identities=12%  Similarity=0.016  Sum_probs=66.7

Q ss_pred             CeEEEEEeCCCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCCHHHhhhcCCC
Q 024659           71 NVVYKGKLENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWET  149 (264)
Q Consensus        71 g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~  149 (264)
                      .+.-.+.-+-| ...+|+++...-. ...-+.++.+++.++.  .|+++.--  ..-.+.+|.|+|-....         
T Consensus        76 sTl~~~kt~iG-~L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~~i---------  141 (308)
T PF07387_consen   76 STLLIGKTKIG-PLFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKIKI---------  141 (308)
T ss_pred             eEEEEeccccc-hhhhhhccCCCcccchhhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCccc---------
Confidence            34444443334 4455666543322 2334677788877764  45555521  22346788898844211         


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHh-cCCCceeeccCCCCeeeCCCCCeEEcccCC
Q 024659          150 QPMKWAMRLRVALHIAEALEYCT-SKERALYHDLNAYRIVFDDDVNPRLSCFGL  202 (264)
Q Consensus       150 ~~~~~~~~~~i~~qi~~~l~~lh-~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~  202 (264)
                        .+..   .+ ..=+.+|...| +..+.+|+|..|+||+-|..|.+||.|-+.
T Consensus       142 --~~~N---~i-~agi~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKlVDP~~  189 (308)
T PF07387_consen  142 --NFSN---FI-TAGIKDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKLVDPVC  189 (308)
T ss_pred             --chhH---HH-HHhHHHHHHhhccCCCeecCCCChhheeecCCCCEEecChhh
Confidence              1111   11 11134566678 345799999999999999999999999765

The function of this family is unknown.

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=96.20  E-value=0.021  Score=49.36  Aligned_cols=59  Identities=17%  Similarity=0.106  Sum_probs=40.5

Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeC
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD  190 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~  190 (264)
                      .++-+|..|-++..++..   ...++.....++.-...|+-.|-..-+++|.|++|.||++-
T Consensus       321 vl~E~~~~Gl~v~~~v~~---~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlir  379 (565)
T KOG1236|consen  321 VLVETYERGLSVLRFVKW---KSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIR  379 (565)
T ss_pred             eeeeeccccccHHhhhhc---ccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEE
Confidence            456667788888888843   33444556666666666664443322899999999999994

>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []

Probab=95.12  E-value=0.14  Score=41.70  Aligned_cols=77  Identities=16%  Similarity=0.110  Sum_probs=52.3

Q ss_pred             cCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC-CCCCHHH
Q 024659           64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM-PNDTLAK  142 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~~~sL~~  142 (264)
                      .+..|..+.|+.++..+|...++|...+......+  ......|+...-...+++++.-  ...-.+++|.+ ++.+|.+
T Consensus         9 ~~~~g~~s~V~pv~~~dG~~avLKl~~p~~~~~~E--~~g~~~L~~w~G~GaVrll~~d--~~~~AlLLErl~~g~~L~~   84 (253)
T PF04655_consen    9 PPAHGSSSLVVPVRRADGTPAVLKLAPPHAEAEHE--ARGEAALRWWNGRGAVRLLAAD--PERGALLLERLDPGRSLAS   84 (253)
T ss_pred             CCCCCcceEEEEEEcCCCCeEEEEecCCcccchhh--hhHHhHhheeCCCCceeeeccc--cccchhhhhhccCCCchhh
Confidence            34568889999999999999999998765422211  1122457777777788888874  23446777887 5557765


Q ss_pred             hh
Q 024659          143 HL  144 (264)
Q Consensus       143 ~l  144 (264)
                      ..
T Consensus        85 ~~   86 (253)
T PF04655_consen   85 LP   86 (253)
T ss_pred             cc
Confidence            54

Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process

>PRK10271 thiK thiamine kinase; Provisional

Probab=95.00  E-value=0.018  Score=44.47  Aligned_cols=32  Identities=19%  Similarity=0.117  Sum_probs=27.0

Q ss_pred             CceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       176 ~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      ..+|+|+.|.|+++.+++ ++++||+.+....+
T Consensus        78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~gDp  109 (188)
T PRK10271         78 APLHMDVHAGNLVHSASG-LRLIDWEYAGDGDI  109 (188)
T ss_pred             eeecCCCCCccEEEECCC-EEEEeCCcccCCCH
Confidence            469999999999998777 89999998875443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	264
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		1e-19
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		1e-19
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		2e-19
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-19
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		2e-19
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		6e-19
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		2e-18
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		6e-18
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		5e-14
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		5e-14
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		6e-14
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		7e-14
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		7e-14
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		8e-14
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		8e-14
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		3e-12
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		3e-12
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		3e-12
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		5e-12
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		1e-11
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		1e-11
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		1e-11
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		2e-11
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		2e-11
2pl0_A	289	Lck Bound To Imatinib Length = 289		2e-11
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		2e-11
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		2e-11
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		2e-11
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		2e-11
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		2e-11
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		2e-11
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		2e-11
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		6e-11
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		3e-10
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		3e-10
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		3e-10
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		4e-10
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		4e-10
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-10
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		6e-10
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		7e-10
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		8e-10
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		1e-09
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		1e-09
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		1e-09
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		1e-09
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		1e-09
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		1e-09
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		1e-09
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		1e-09
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		1e-09
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		2e-09
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		2e-09
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		2e-09
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		2e-09
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		2e-09
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		2e-09
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		2e-09
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		2e-09
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		2e-09
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		2e-09
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		2e-09
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		2e-09
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		2e-09
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		2e-09
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		3e-09
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		3e-09
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		3e-09
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		3e-09
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		3e-09
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		3e-09
3a4o_X	286	Lyn Kinase Domain Length = 286		3e-09
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		3e-09
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		3e-09
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		3e-09
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		4e-09
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		4e-09
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		4e-09
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		4e-09
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		7e-09
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		8e-09
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		1e-08
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		1e-08
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		1e-08
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		1e-08
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		1e-08
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		1e-08
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		1e-08
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		1e-08
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		1e-08
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		2e-08
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		2e-08
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		2e-08
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		2e-08
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		2e-08
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		3e-08
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		3e-08
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		3e-08
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		3e-08
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		3e-08
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		3e-08
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		3e-08
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		3e-08
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		3e-08
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		3e-08
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		3e-08
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		3e-08
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		4e-08
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		4e-08
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		6e-08
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		7e-08
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		7e-08
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		9e-08
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		9e-08
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-07
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-07
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-07
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		1e-07
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		2e-07
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		2e-07
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		2e-07
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		1e-06
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		1e-06
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		1e-06
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-06
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-06
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		2e-06
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		2e-06
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		2e-06
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		2e-06
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-06
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		2e-06
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		2e-06
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		2e-06
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		2e-06
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-06
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		3e-06
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		4e-06
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		4e-06
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		5e-06
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		5e-06
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		5e-06
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		5e-06
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		8e-06
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		8e-06
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		1e-05
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		1e-05
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		1e-05
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		1e-05
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		1e-05
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		1e-05
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		1e-05
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		1e-05
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		1e-05
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		1e-05
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		1e-05
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		1e-05
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		1e-05
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		1e-05
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		2e-05
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		2e-05
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		2e-05
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		2e-05
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		2e-05
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		2e-05
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		2e-05
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		2e-05
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-05
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		2e-05
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-05
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-05
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		2e-05
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		2e-05
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		2e-05
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		2e-05
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		2e-05
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		2e-05
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		3e-05
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		3e-05
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		3e-05
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		4e-05
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		5e-05
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		5e-05
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		6e-05
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		6e-05
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		7e-05
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		7e-05
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		7e-05
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		7e-05
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		7e-05
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		7e-05
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		8e-05
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		8e-05
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		8e-05
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		8e-05
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		8e-05
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		8e-05
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		9e-05
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		9e-05
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		9e-05
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		1e-04
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		1e-04
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		1e-04
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		1e-04
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-04
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		2e-04
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		2e-04
3b2t_A	311	Structure Of Phosphotransferase Length = 311		2e-04
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		2e-04
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		3e-04
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		3e-04
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		3e-04
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		3e-04
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		3e-04
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		3e-04
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		3e-04
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		3e-04
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		3e-04
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		3e-04
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		3e-04
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		3e-04
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		4e-04
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		4e-04
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		4e-04
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		4e-04
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		4e-04
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-04
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		4e-04
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		4e-04
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		4e-04
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		4e-04
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		4e-04
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		4e-04
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-04
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		4e-04
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		4e-04
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		4e-04
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		4e-04
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		5e-04
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		5e-04
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		6e-04
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		7e-04
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		7e-04
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		7e-04
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		8e-04
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		8e-04
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		8e-04
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		9e-04
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		9e-04
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		9e-04
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		9e-04

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 113/225 (50%), Gaps = 23/225 (10%)
Query: 41  FCEYSIETLRTATSGFAMENIV---SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD- 96
           F  +S   L+  T+ F    I    ++ GE    VVYKG + N   +AVK+   +A  D 
Sbjct: 12  FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKL--AAMVDI 68
Query: 97  -----ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE-TQ 150
                 +QF +E + + + ++  L  LLG   +GD+  LV  YMPN +L   L   + T 
Sbjct: 69  TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 151 PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 208
           P+ W MR ++A   A  + +   +   ++ D+ +  I+ D+    ++S FGL + S    
Sbjct: 129 PLSWHMRCKIAQGAANGINFL-HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 209 -----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG 248
                 R   T  A+  PE LR G +TP+S +YSFG +LL++++G
Sbjct: 188 QTVMXSRIVGTT-AYMAPEALR-GEITPKSDIYSFGVVLLEIITG 230

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 114/234 (48%), Gaps = 14/234 (5%)
Query: 26  DVENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIA 85
           DV  EE P V ++     +S+  L+ A+  F+ +NI+   G      VYKG+L +   +A
Sbjct: 11  DVPAEEDPEV-HLGQLKRFSLRELQVASDNFSNKNIL---GRGGFGKVYKGRLADGTLVA 66
Query: 86  VKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL 144
           VKR           QF  E   +    +R L  L G C    ERLLV  YM N ++A  L
Sbjct: 67  VKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL 126
Query: 145 FHW-ETQ-PMKWAMRLRVALHIAEALEYCTS--KERALYHDLNAYRIVFDDDVNPRLSCF 200
               E+Q P+ W  R R+AL  A  L Y       + ++ D+ A  I+ D++    +  F
Sbjct: 127 RERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 186
Query: 201 GLMK--NSRDGR---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK 249
           GL K  + +D     +    +    PEYL TG+ + ++ ++ +G +LL+L++G+
Sbjct: 187 GLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 240

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 113/225 (50%), Gaps = 23/225 (10%)
Query: 41  FCEYSIETLRTATSGFAMENIV---SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD- 96
           F  +S   L+  T+ F    I    ++ GE    VVYKG + N   +AVK+   +A  D 
Sbjct: 12  FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKL--AAMVDI 68
Query: 97  -----ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE-TQ 150
                 +QF +E + + + ++  L  LLG   +GD+  LV  YMPN +L   L   + T 
Sbjct: 69  TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 151 PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 208
           P+ W MR ++A   A  + +   +   ++ D+ +  I+ D+    ++S FGL + S    
Sbjct: 129 PLSWHMRCKIAQGAANGINFL-HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 209 -----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG 248
                 R   T  A+  PE LR G +TP+S +YSFG +LL++++G
Sbjct: 188 QTVMXXRIVGTT-AYMAPEALR-GEITPKSDIYSFGVVLLEIITG 230

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 113/225 (50%), Gaps = 23/225 (10%)
Query: 41  FCEYSIETLRTATSGFAMENIV---SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD- 96
           F  +S   L+  T+ F    I    ++ GE    VVYKG + N   +AVK+   +A  D 
Sbjct: 6   FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-TVAVKKL--AAMVDI 62
Query: 97  -----ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE-TQ 150
                 +QF +E + + + ++  L  LLG   +GD+  LV  YMPN +L   L   + T 
Sbjct: 63  TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 122
Query: 151 PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 208
           P+ W MR ++A   A  + +   +   ++ D+ +  I+ D+    ++S FGL + S    
Sbjct: 123 PLSWHMRCKIAQGAANGINFL-HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 181
Query: 209 -----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG 248
                 R   T  A+  PE LR G +TP+S +YSFG +LL++++G
Sbjct: 182 QXVMXXRIVGTT-AYMAPEALR-GEITPKSDIYSFGVVLLEIITG 224

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 113/234 (48%), Gaps = 14/234 (5%)
Query: 26  DVENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIA 85
           DV  EE P V ++     +S+  L+ A+  F  +NI+   G      VYKG+L +   +A
Sbjct: 3   DVPAEEDPEV-HLGQLKRFSLRELQVASDNFXNKNIL---GRGGFGKVYKGRLADGXLVA 58
Query: 86  VKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL 144
           VKR           QF  E   +    +R L  L G C    ERLLV  YM N ++A  L
Sbjct: 59  VKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL 118
Query: 145 FHW-ETQ-PMKWAMRLRVALHIAEALEYCTS--KERALYHDLNAYRIVFDDDVNPRLSCF 200
               E+Q P+ W  R R+AL  A  L Y       + ++ D+ A  I+ D++    +  F
Sbjct: 119 RERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 178
Query: 201 GLMK--NSRDGR---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK 249
           GL K  + +D     +    +    PEYL TG+ + ++ ++ +G +LL+L++G+
Sbjct: 179 GLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 232

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 14/207 (6%)
Query: 49  LRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVG 108
           L  AT+ F  + ++   G      VYKG L +  ++A+KR    +     +F  E   + 
Sbjct: 34  LEEATNNFDHKFLI---GHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 109 QLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAE 166
             R+  L +L+G C E +E +L+ +YM N  L +HL+  +  T  M W  RL + +  A 
Sbjct: 91  FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 167 ALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRD-GRSY-----STNLAFT 219
            L Y  +  RA+ H D+ +  I+ D++  P+++ FG+ K   + G+++        L + 
Sbjct: 151 GLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYI 208
Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLL 246
            PEY   GR+T +S +YSFG +L ++L
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVL 235

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 14/207 (6%)
Query: 49  LRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVG 108
           L  AT+ F  + ++   G      VYKG L +  ++A+KR    +     +F  E   + 
Sbjct: 34  LEEATNNFDHKFLI---GHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 109 QLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAE 166
             R+  L +L+G C E +E +L+ +YM N  L +HL+  +  T  M W  RL + +  A 
Sbjct: 91  FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 167 ALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRD------GRSYSTNLAFT 219
            L Y  +  RA+ H D+ +  I+ D++  P+++ FG+ K   +             L + 
Sbjct: 151 GLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYI 208
Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLL 246
            PEY   GR+T +S +YSFG +L ++L
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVL 235

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 87.4 bits (215), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 110/225 (48%), Gaps = 23/225 (10%)
Query: 41  FCEYSIETLRTATSGFAMENIV---SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD- 96
           F  +S   L+  T+ F    I    ++ GE    VVYKG + N   +AVK+   +A  D 
Sbjct: 3   FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNT-TVAVKKL--AAMVDI 59
Query: 97  -----ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE-TQ 150
                 +QF +E +   + ++  L  LLG   +GD+  LV  Y PN +L   L   + T 
Sbjct: 60  TTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP 119
Query: 151 PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 208
           P+ W  R ++A   A  + +   +   ++ D+ +  I+ D+    ++S FGL + S    
Sbjct: 120 PLSWHXRCKIAQGAANGINFL-HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 209 -----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG 248
                 R   T  A+  PE LR G +TP+S +YSFG +LL++++G
Sbjct: 179 QXVXXSRIVGTT-AYXAPEALR-GEITPKSDIYSFGVVLLEIITG 221

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             + E G     VV  GK   Q+ +A+K     +  +  +F+EEA+ +  L + +L  L 
Sbjct: 27  TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 85
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHL----FHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C +     ++ EYM N  L  +L      ++TQ +     L +   + EA+EY  SK+
Sbjct: 86  GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESKQ 140
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST-----NLAFTPPEYLRTGRVT 230
             L+ DL A   + +D    ++S FGL +   D    S+      + ++PPE L   + +
Sbjct: 141 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 231 PESVMYSFGTLLLDLLSGKHIP 252
            +S +++FG L+ ++ S   +P
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMP 221

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             + E G     VV  GK   Q+ +A+K     +  +  +F+EEA+ +  L + +L  L 
Sbjct: 12  TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 70
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHL----FHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C +     ++ EYM N  L  +L      ++TQ +     L +   + EA+EY  SK+
Sbjct: 71  GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESKQ 125
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVT 230
             L+ DL A   + +D    ++S FGL +   D    S+      + ++PPE L   + +
Sbjct: 126 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFS 184
Query: 231 PESVMYSFGTLLLDLLSGKHIP 252
            +S +++FG L+ ++ S   +P
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMP 206

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             + E G     VV  GK   Q+ +A+K     +  +  +F+EEA+ +  L + +L  L 
Sbjct: 27  TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLY 85
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHL----FHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C +     ++ EYM N  L  +L      ++TQ +     L +   + EA+EY  SK+
Sbjct: 86  GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESKQ 140
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA------FTPPEYLRTGRV 229
             L+ DL A   + +D    ++S FGL +   D   Y++++       ++PPE L   + 
Sbjct: 141 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKF 198
Query: 230 TPESVMYSFGTLLLDLLSGKHIP 252
           + +S +++FG L+ ++ S   +P
Sbjct: 199 SSKSDIWAFGVLMWEIYSLGKMP 221

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             + E G     VV  GK   Q+ +A+K     +  +  +F+EEA+ +  L + +L  L 
Sbjct: 11  TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 69
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHL----FHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C +     ++ EYM N  L  +L      ++TQ +     L +   + EA+EY  SK+
Sbjct: 70  GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESKQ 124
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA------FTPPEYLRTGRV 229
             L+ DL A   + +D    ++S FGL +   D   Y++++       ++PPE L   + 
Sbjct: 125 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKF 182
Query: 230 TPESVMYSFGTLLLDLLSGKHIP 252
           + +S +++FG L+ ++ S   +P
Sbjct: 183 SSKSDIWAFGVLMWEIYSLGKMP 205

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             + E G     VV  GK   Q+ +A+K     +  +  +F+EEA+ +  L + +L  L 
Sbjct: 18  TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 76
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHL----FHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C +     ++ EYM N  L  +L      ++TQ +     L +   + EA+EY  SK+
Sbjct: 77  GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESKQ 131
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA------FTPPEYLRTGRV 229
             L+ DL A   + +D    ++S FGL +   D   Y++++       ++PPE L   + 
Sbjct: 132 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKF 189
Query: 230 TPESVMYSFGTLLLDLLSGKHIP 252
           + +S +++FG L+ ++ S   +P
Sbjct: 190 SSKSDIWAFGVLMWEIYSLGKMP 212

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 73.9 bits (180), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             + E G     VV  GK   Q+ +A+K     +  +  +F+EEA+ +  L + +L  L 
Sbjct: 12  TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 70
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHL----FHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C +     ++ EYM N  L  +L      ++TQ +     L +   + EA+EY  SK+
Sbjct: 71  GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESKQ 125
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA------FTPPEYLRTGRV 229
             L+ DL A   + +D    ++S FGL +   D   Y++++       ++PPE L   + 
Sbjct: 126 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKF 183
Query: 230 TPESVMYSFGTLLLDLLSGKHIP 252
           + +S +++FG L+ ++ S   +P
Sbjct: 184 SSKSDIWAFGVLMWEIYSLGKMP 206

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 73.9 bits (180), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             + E G     VV  GK   Q+ +A+K     +  +  +F+EEA+ +  L + +L  L 
Sbjct: 7   TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLY 65
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHL----FHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C +     ++ EYM N  L  +L      ++TQ +     L +   + EA+EY  SK+
Sbjct: 66  GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-----LEMCKDVCEAMEYLESKQ 120
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA------FTPPEYLRTGRV 229
             L+ DL A   + +D    ++S FGL +   D   Y++++       ++PPE L   + 
Sbjct: 121 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKF 178
Query: 230 TPESVMYSFGTLLLDLLSGKHIP 252
           + +S +++FG L+ ++ S   +P
Sbjct: 179 SSKSDIWAFGVLMWEIYSLGKMP 201

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 5/172 (2%)
Query: 83  RIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LVAEYMPNDTLA 141
           ++AVK     A   A+ FL EA  + QLR+  L  LLG   E    L +V EYM   +L 
Sbjct: 218 KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 275
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L       +     L+ +L + EA+EY       ++ DL A  ++  +D   ++S FG
Sbjct: 276 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFG 334
Query: 202 LMKNSRDGRSYST-NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
           L K +   +      + +T PE LR  + + +S ++SFG LL ++ S   +P
Sbjct: 335 LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 5/172 (2%)
Query: 83  RIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LVAEYMPNDTLA 141
           ++AVK     A   A+ FL EA  + QLR+  L  LLG   E    L +V EYM   +L 
Sbjct: 46  KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 103
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L       +     L+ +L + EA+EY       ++ DL A  ++  +D   ++S FG
Sbjct: 104 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFG 162
Query: 202 LMKNSRDGRSYST-NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
           L K +   +      + +T PE LR  + + +S ++SFG LL ++ S   +P
Sbjct: 163 LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 5/172 (2%)
Query: 83  RIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LVAEYMPNDTLA 141
           ++AVK     A   A+ FL EA  + QLR+  L  LLG   E    L +V EYM   +L 
Sbjct: 31  KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 88
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L       +     L+ +L + EA+EY       ++ DL A  ++  +D   ++S FG
Sbjct: 89  DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-FVHRDLAARNVLVSEDNVAKVSDFG 147
Query: 202 LMKNSRDGRSYST-NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
           L K +   +      + +T PE LR  + + +S ++SFG LL ++ S   +P
Sbjct: 148 LTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 5/172 (2%)
Query: 83  RIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LVAEYMPNDTLA 141
           ++AVK     A   A+ FL EA  + QLR+  L  LLG   E    L +V EYM   +L 
Sbjct: 37  KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLV 94
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L       +     L+ +L + EA+EY       ++ DL A  ++  +D   ++S FG
Sbjct: 95  DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFG 153
Query: 202 LMKNSRDGRSYST-NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
           L K +   +      + +T PE LR    + +S ++SFG LL ++ S   +P
Sbjct: 154 LTKEASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 16/202 (7%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANL 118
            +V   G      V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L
Sbjct: 16  KLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRL 73
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERAL 178
                + +   ++ EYM N +L   L       +     L +A  IAE + +   +ER  
Sbjct: 74  YAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNY 130
Query: 179 YH-DLNAYRIVFDDDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVT 230
            H DL A  I+  D ++ +++ FGL +        +R+G  +   + +T PE +  G  T
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP--IKWTAPEAINYGTFT 188
Query: 231 PESVMYSFGTLLLDLLSGKHIP 252
            +S ++SFG LL ++++   IP
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIP 210

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 16/189 (8%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 37  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 93
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H DL A  I+  
Sbjct: 94  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 151
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 152 DTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 209
Query: 244 DLLSGKHIP 252
           ++++   IP
Sbjct: 210 EIVTHGRIP 218

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 16/189 (8%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 24  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 80
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H DL A  I+  
Sbjct: 81  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 138
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 139 DTLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 196
Query: 244 DLLSGKHIP 252
           ++++   IP
Sbjct: 197 EIVTHGRIP 205

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 16/189 (8%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 35  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 91
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H DL A  I+  
Sbjct: 92  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 149
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 150 DTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 207
Query: 244 DLLSGKHIP 252
           ++++   IP
Sbjct: 208 EIVTHGRIP 216

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 16/189 (8%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 31  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 87
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H DL A  I+  
Sbjct: 88  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 145
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 146 DTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 203
Query: 244 DLLSGKHIP 252
           ++++   IP
Sbjct: 204 EIVTHGRIP 212

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 16/189 (8%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 39  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 95
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H DL A  I+  
Sbjct: 96  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 153
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 154 DTLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 211
Query: 244 DLLSGKHIP 252
           ++++   IP
Sbjct: 212 EIVTHGRIP 220

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 16/189 (8%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 29  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H DL A  I+  
Sbjct: 86  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 143
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 144 DTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 201
Query: 244 DLLSGKHIP 252
           ++++   IP
Sbjct: 202 EIVTHGRIP 210

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 16/189 (8%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 38  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 94
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H DL A  I+  
Sbjct: 95  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 152
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 153 DTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 210
Query: 244 DLLSGKHIP 252
           ++++   IP
Sbjct: 211 EIVTHGRIP 219

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 16/189 (8%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 29  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H DL A  I+  
Sbjct: 86  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 143
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 144 DTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 201
Query: 244 DLLSGKHIP 252
           ++++   IP
Sbjct: 202 EIVTHGRIP 210

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 16/189 (8%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 30  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 86
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H DL A  I+  
Sbjct: 87  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 144
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 145 DTLSCKIADFGLARLIEDNEXTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 202
Query: 244 DLLSGKHIP 252
           ++++   IP
Sbjct: 203 EIVTHGRIP 211

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 16/189 (8%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 34  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 90
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H DL A  I+  
Sbjct: 91  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 148
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 149 DTLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 206
Query: 244 DLLSGKHIP 252
           ++++   IP
Sbjct: 207 EIVTHGRIP 215

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 16/189 (8%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 35  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 91
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H DL A  I+  
Sbjct: 92  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 149
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 150 DTLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 207
Query: 244 DLLSGKHIP 252
           ++++   IP
Sbjct: 208 EIVTHGRIP 216

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 16/189 (8%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 29  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H DL A  I+  
Sbjct: 86  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRDLRAANILVS 143
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 144 DTLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 201
Query: 244 DLLSGKHIP 252
           ++++   IP
Sbjct: 202 EIVTHGRIP 210

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 93/189 (49%), Gaps = 16/189 (8%)
Query: 73  VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      ++AVK   + S  PDA  FL EA  + QL+++RL  L     + +   ++
Sbjct: 25  VWMGYYNGHTKVAVKSLKQGSMSPDA--FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 81
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N +L   L       +     L +A  IAE + +   +ER   H +L A  I+  
Sbjct: 82  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI--EERNYIHRNLRAANILVS 139
Query: 191 DDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLL 243
           D ++ +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL 
Sbjct: 140 DTLSCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLT 197
Query: 244 DLLSGKHIP 252
           ++++   IP
Sbjct: 198 EIVTHGRIP 206

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 22/220 (10%)
Query: 60  NIVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRN 112
            ++ E G+ +  +VY+G      K E + R+AVK  N SA    R +FL EA  +     
Sbjct: 17  TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 76
Query: 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHI 164
             +  LLG   +G   L+V E M +  L  +L     +        P      +++A  I
Sbjct: 77  HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 136
Query: 165 AEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAF 218
           A+ + Y  +K + ++ DL A   +   D   ++  FG+ ++       R G      + +
Sbjct: 137 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 195
Query: 219 TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS 258
             PE L+ G  T  S M+SFG +L ++ S    P   +S+
Sbjct: 196 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 235

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 22/220 (10%)
Query: 60  NIVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRN 112
            ++ E G+ +  +VY+G      K E + R+AVK  N SA    R +FL EA  +     
Sbjct: 20  TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 79
Query: 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHI 164
             +  LLG   +G   L+V E M +  L  +L     +        P      +++A  I
Sbjct: 80  HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 165 AEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAF 218
           A+ + Y  +K + ++ DL A   +   D   ++  FG+ ++       R G      + +
Sbjct: 140 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 219 TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS 258
             PE L+ G  T  S M+SFG +L ++ S    P   +S+
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 238

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 22/220 (10%)
Query: 60  NIVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRN 112
            ++ E G+ +  +VY+G      K E + R+AVK  N SA    R +FL EA  +     
Sbjct: 20  TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 79
Query: 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHI 164
             +  LLG   +G   L+V E M +  L  +L     +        P      +++A  I
Sbjct: 80  HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 165 AEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAF 218
           A+ + Y  +K + ++ DL A   +   D   ++  FG+ ++       R G      + +
Sbjct: 140 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRW 198
Query: 219 TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS 258
             PE L+ G  T  S M+SFG +L ++ S    P   +S+
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 238

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 22/220 (10%)
Query: 60  NIVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRN 112
            ++ E G+ +  +VY+G      K E + R+AVK  N SA    R +FL EA  +     
Sbjct: 19  TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 78
Query: 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHI 164
             +  LLG   +G   L+V E M +  L  +L     +        P      +++A  I
Sbjct: 79  HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 165 AEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAF 218
           A+ + Y  +K + ++ DL A   +   D   ++  FG+ ++       R G      + +
Sbjct: 139 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 197
Query: 219 TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS 258
             PE L+ G  T  S M+SFG +L ++ S    P   +S+
Sbjct: 198 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 237

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 22/220 (10%)
Query: 60  NIVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRN 112
            ++ E G+ +  +VY+G      K E + R+AVK  N SA    R +FL EA  +     
Sbjct: 20  TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 79
Query: 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHI 164
             +  LLG   +G   L+V E M +  L  +L     +        P      +++A  I
Sbjct: 80  HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 165 AEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAF 218
           A+ + Y  +K + ++ DL A   +   D   ++  FG+ ++       R G      + +
Sbjct: 140 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRW 198
Query: 219 TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS 258
             PE L+ G  T  S M+SFG +L ++ S    P   +S+
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 238

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 22/220 (10%)
Query: 60  NIVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRN 112
            ++ E G+ +  +VY+G      K E + R+AVK  N SA    R +FL EA  +     
Sbjct: 20  TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 79
Query: 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHI 164
             +  LLG   +G   L+V E M +  L  +L     +        P      +++A  I
Sbjct: 80  HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 165 AEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAF 218
           A+ + Y  +K + ++ DL A   +   D   ++  FG+ ++       R G      + +
Sbjct: 140 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 219 TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS 258
             PE L+ G  T  S M+SFG +L ++ S    P   +S+
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 238

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             V E G     +V+ G   N+ ++A+K     A  +   F+EEA  + +L + +L  L 
Sbjct: 10  TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLY 68
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERA 177
           G C E     LV E+M +  L+ +L    TQ   +A    L + L + E + Y   +   
Sbjct: 69  GVCLEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYL-EEASV 124
Query: 178 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPE 232
           ++ DL A   +  ++   ++S FG+ +   D +  S+      + +  PE     R + +
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 233 SVMYSFGTLLLDLLSGKHIP 252
           S ++SFG L+ ++ S   IP
Sbjct: 185 SDVWSFGVLMWEVFSEGKIP 204

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             V E G     +V+ G   N+ ++A+K     A  +   F+EEA  + +L + +L  L 
Sbjct: 11  TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLY 69
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERA 177
           G C E     LV E+M +  L+ +L    TQ   +A    L + L + E + Y   +   
Sbjct: 70  GVCLEQAPICLVTEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAY-LEEACV 125
Query: 178 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPE 232
           ++ DL A   +  ++   ++S FG+ +   D +  S+      + +  PE     R + +
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 185
Query: 233 SVMYSFGTLLLDLLSGKHIP 252
           S ++SFG L+ ++ S   IP
Sbjct: 186 SDVWSFGVLMWEVFSEGKIP 205

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 283 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 339
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 340 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-ERMNYVHRDLRAANILVGE 398
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 399 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 456
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 457 LTTKGRVP 464

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 200 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 256
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 257 GEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-ERMNYVHRDLRAANILVGE 315
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 316 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 373
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 374 LTTKGRVP 381

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 24  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIXIV 80
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 81  TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 139
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 140 NLVCKVADFGLARLIEDNEXTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 197
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 198 LTTKGRVP 205

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             V E G     +V+ G   N+ ++A+K     A  +   F+EEA  + +L + +L  L 
Sbjct: 13  TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLY 71
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERA 177
           G C E     LV E+M +  L+ +L    TQ   +A    L + L + E + Y   +   
Sbjct: 72  GVCLEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAY-LEEACV 127
Query: 178 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPE 232
           ++ DL A   +  ++   ++S FG+ +   D +  S+      + +  PE     R + +
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 187
Query: 233 SVMYSFGTLLLDLLSGKHIP 252
           S ++SFG L+ ++ S   IP
Sbjct: 188 SDVWSFGVLMWEVFSEGKIP 207

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 200 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 256
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 257 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-ERMNYVHRDLRAANILVGE 315
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 316 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 373
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 374 LTTKGRVP 381

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 27  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 83
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 84  TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 142
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 143 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 200
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 201 LTTKGRVP 208

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 200 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 256
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 257 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV-ERMNYVHRDLRAANILVGE 315
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 316 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 373
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 374 LTTKGRVP 381

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             V E G     +V+ G   N+ ++A+K     A  +   F+EEA  + +L + +L  L 
Sbjct: 8   TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLY 66
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERA 177
           G C E     LV E+M +  L+ +L    TQ   +A    L + L + E + Y   +   
Sbjct: 67  GVCLEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAY-LEEACV 122
Query: 178 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPE 232
           ++ DL A   +  ++   ++S FG+ +   D +  S+      + +  PE     R + +
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 182
Query: 233 SVMYSFGTLLLDLLSGKHIP 252
           S ++SFG L+ ++ S   IP
Sbjct: 183 SDVWSFGVLMWEVFSEGKIP 202

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             V E G     +V+ G   N+ ++A+K     A  +   F+EEA  + +L + +L  L 
Sbjct: 10  TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLY 68
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERA 177
           G C E     LV E+M +  L+ +L    TQ   +A    L + L + E + Y   +   
Sbjct: 69  GVCLEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAY-LEEACV 124
Query: 178 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPE 232
           ++ DL A   +  ++   ++S FG+ +   D +  S+      + +  PE     R + +
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 233 SVMYSFGTLLLDLLSGKHIP 252
           S ++SFG L+ ++ S   IP
Sbjct: 185 SDVWSFGVLMWEVFSEGKIP 204

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 22/220 (10%)
Query: 60  NIVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRN 112
            ++ E G+ +  +VY+G      K E + R+AVK  N SA    R +FL EA  +     
Sbjct: 21  TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 80
Query: 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHI 164
             +  LLG   +G   L+V E M +  L  +L     +        P      +++A  I
Sbjct: 81  HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 140
Query: 165 AEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAF 218
           A+ + Y  +K + ++ +L A   +   D   ++  FG+ ++       R G      + +
Sbjct: 141 ADGMAYLNAK-KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 199
Query: 219 TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS 258
             PE L+ G  T  S M+SFG +L ++ S    P   +S+
Sbjct: 200 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 239

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 34  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 90
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 91  TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 149
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 150 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 208 LTTKGRVP 215

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 22/220 (10%)
Query: 60  NIVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRN 112
            ++ E G+ +  +VY+G      K E + R+AVK  N SA    R +FL EA  +     
Sbjct: 20  TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 79
Query: 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHI 164
             +  LLG   +G   L+V E M +  L  +L     +        P      +++A  I
Sbjct: 80  HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 165 AEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAF 218
           A+ + Y  +K + ++ +L A   +   D   ++  FG+ ++       R G      + +
Sbjct: 140 ADGMAYLNAK-KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 198
Query: 219 TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS 258
             PE L+ G  T  S M+SFG +L ++ S    P   +S+
Sbjct: 199 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN 238

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 23  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 79
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 80  TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 138
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 139 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 196
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 197 LTTKGRVP 204

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 25  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 81
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 82  TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 140
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 141 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 198
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 199 LTTKGRVP 206

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 34  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 90
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 91  TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLAAANILVGE 149
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 150 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 208 LTTKGRVP 215

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 34  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 90
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 91  CEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 149
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 150 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 208 LTTKGRVP 215

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 34  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 90
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 91  IEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 149
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 150 NLVCKVADFGLARLIEDNEXTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 208 LTTKGRVP 215

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 73  VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD- 126
           VY G L +    +   AVK  NR +   +  QFL E   +    +  + +LLG C   + 
Sbjct: 46  VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 105
Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
             L+V  YM +  L ++    ET        +   L +A+ ++Y  SK + ++ DL A  
Sbjct: 106 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 163
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 238
            + D+    +++ FGL ++  D   YS +        + +   E L+T + T +S ++SF
Sbjct: 164 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 239 GTLLLDLLSGKHIPPSHVSSF 259
           G LL +L++    P   V++F
Sbjct: 224 GVLLWELMTRGAPPYPDVNTF 244

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 73  VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
           VY G L +    +   AVK  NR +   +  QFL E   +    +  + +LLG C   + 
Sbjct: 44  VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 103
Query: 128 R-LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
             L+V  YM +  L ++    ET        +   L +A+ ++Y  SK + ++ DL A  
Sbjct: 104 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 161
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 238
            + D+    +++ FGL ++  D   YS +        + +   E L+T + T +S ++SF
Sbjct: 162 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 221
Query: 239 GTLLLDLLSGKHIPPSHVSSF 259
           G LL +L++    P   V++F
Sbjct: 222 GVLLWELMTRGAPPYPDVNTF 242

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 88/187 (47%), Gaps = 12/187 (6%)
Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V+ G      ++A+K   +        FLEEA+ + +L++ +L  L     E +   +V 
Sbjct: 25  VWMGTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE-EPIYIVT 82
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
           EYM   +L   L   E + +K    + +A  +A  + Y   +   ++ DL +  I+  + 
Sbjct: 83  EYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI-ERMNYIHRDLRSANILVGNG 141
Query: 193 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +L
Sbjct: 142 LICKIADFGLARLIEDNEXTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTEL 199
Query: 246 LSGKHIP 252
           ++   +P
Sbjct: 200 VTKGRVP 206

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 34  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 90
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 91  IEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 149
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 150 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 208 LTTKGRVP 215

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 73  VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD- 126
           VY G L +    +   AVK  NR +   +  QFL E   +    +  + +LLG C   + 
Sbjct: 38  VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 97
Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
             L+V  YM +  L ++    ET        +   L +A+ ++Y  SK + ++ DL A  
Sbjct: 98  SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 155
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 238
            + D+    +++ FGL ++  D   YS +        + +   E L+T + T +S ++SF
Sbjct: 156 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 215
Query: 239 GTLLLDLLSGKHIPPSHVSSF 259
           G LL +L++    P   V++F
Sbjct: 216 GVLLWELMTRGAPPYPDVNTF 236

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 73  VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD- 126
           VY G L +    +   AVK  NR +   +  QFL E   +    +  + +LLG C   + 
Sbjct: 43  VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 102
Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
             L+V  YM +  L ++    ET        +   L +A+ ++Y  SK + ++ DL A  
Sbjct: 103 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 160
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 238
            + D+    +++ FGL ++  D   YS +        + +   E L+T + T +S ++SF
Sbjct: 161 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 220
Query: 239 GTLLLDLLSGKHIPPSHVSSF 259
           G LL +L++    P   V++F
Sbjct: 221 GVLLWELMTRGAPPYPDVNTF 241

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 73  VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD- 126
           VY G L +    +   AVK  NR +   +  QFL E   +    +  + +LLG C   + 
Sbjct: 64  VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 123
Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
             L+V  YM +  L ++    ET        +   L +A+ ++Y  SK + ++ DL A  
Sbjct: 124 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 181
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 238
            + D+    +++ FGL ++  D   YS +        + +   E L+T + T +S ++SF
Sbjct: 182 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 241
Query: 239 GTLLLDLLSGKHIPPSHVSSF 259
           G LL +L++    P   V++F
Sbjct: 242 GVLLWELMTRGAPPYPDVNTF 262

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 73  VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD- 126
           VY G L +    +   AVK  NR +   +  QFL E   +    +  + +LLG C   + 
Sbjct: 45  VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 104
Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
             L+V  YM +  L ++    ET        +   L +A+ ++Y  SK + ++ DL A  
Sbjct: 105 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 162
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 238
            + D+    +++ FGL ++  D   YS +        + +   E L+T + T +S ++SF
Sbjct: 163 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 222
Query: 239 GTLLLDLLSGKHIPPSHVSSF 259
           G LL +L++    P   V++F
Sbjct: 223 GVLLWELMTRGAPPYPDVNTF 243

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 73  VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD- 126
           VY G L +    +   AVK  NR +   +  QFL E   +    +  + +LLG C   + 
Sbjct: 46  VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 105
Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
             L+V  YM +  L ++    ET        +   L +A+ ++Y  SK + ++ DL A  
Sbjct: 106 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 163
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 238
            + D+    +++ FGL ++  D   YS +        + +   E L+T + T +S ++SF
Sbjct: 164 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 223
Query: 239 GTLLLDLLSGKHIPPSHVSSF 259
           G LL +L++    P   V++F
Sbjct: 224 GVLLWELMTRGAPPYPDVNTF 244

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 73  VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD- 126
           VY G L +    +   AVK  NR +   +  QFL E   +    +  + +LLG C   + 
Sbjct: 41  VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100
Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
             L+V  YM +  L ++    ET        +   L +A+ ++Y  SK + ++ DL A  
Sbjct: 101 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 158
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 238
            + D+    +++ FGL ++  D   YS +        + +   E L+T + T +S ++SF
Sbjct: 159 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 218
Query: 239 GTLLLDLLSGKHIPPSHVSSF 259
           G LL +L++    P   V++F
Sbjct: 219 GVLLWELMTRGAPPYPDVNTF 239

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 16/201 (7%)
Query: 73  VYKGKLEN----QFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD- 126
           VY G L +    +   AVK  NR +   +  QFL E   +    +  + +LLG C   + 
Sbjct: 65  VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 124
Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
             L+V  YM +  L ++    ET        +   L +A+ ++Y  SK + ++ DL A  
Sbjct: 125 SPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARN 182
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYSF 238
            + D+    +++ FGL ++  D   YS +        + +   E L+T + T +S ++SF
Sbjct: 183 CMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSF 242
Query: 239 GTLLLDLLSGKHIPPSHVSSF 259
           G LL +L++    P   V++F
Sbjct: 243 GVLLWELMTRGAPPYPDVNTF 263

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + ++R+ +L  L     E +   +V
Sbjct: 34  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKIRHEKLVQLYAVVSE-EPIYIV 90
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 91  TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 149
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 150 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 208 LTTKGRVP 215

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 34  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 90
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM    L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 91  TEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 149
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 150 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 208 LTTKGRVP 215

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 11/187 (5%)
Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V+ G   N  ++AVK   +      + FLEEA  +  L++ +L  L       +   ++ 
Sbjct: 29  VWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIIT 87
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
           EYM   +L   L   E   +     +  +  IAE + Y   K   ++ DL A  ++  + 
Sbjct: 88  EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK-NYIHRDLRAANVLVSES 146
Query: 193 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +  +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL ++
Sbjct: 147 LMCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGCFTIKSDVWSFGILLYEI 204
Query: 246 LSGKHIP 252
           ++   IP
Sbjct: 205 VTYGKIP 211

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 11/200 (5%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
            +V + G      V+ G   N  ++AVK   +      + FLEEA  +  L++ +L  L 
Sbjct: 15  KLVKKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLY 73
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
               + +   ++ E+M   +L   L   E   +     +  +  IAE + Y   K   ++
Sbjct: 74  AVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY-IH 132
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPE 232
            DL A  ++  + +  +++ FGL +        +R+G  +   + +T PE +  G  T +
Sbjct: 133 RDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGCFTIK 190
Query: 233 SVMYSFGTLLLDLLSGKHIP 252
           S ++SFG LL ++++   IP
Sbjct: 191 SNVWSFGILLYEIVTYGKIP 210

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
             V E G     +V+ G   N+ ++A+K     +  +   F+EEA  + +L + +L  L 
Sbjct: 30  TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSE-DDFIEEAEVMMKLSHPKLVQLY 88
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERA 177
           G C E     LV E+M +  L+ +L    TQ   +A    L + L + E + Y   +   
Sbjct: 89  GVCLEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAY-LEEACV 144
Query: 178 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPE 232
           ++ DL A   +  ++   ++S FG+ +   D +  S+      + +  PE     R + +
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 204
Query: 233 SVMYSFGTLLLDLLSGKHIP 252
           S ++SFG L+ ++ S   IP
Sbjct: 205 SDVWSFGVLMWEVFSEGKIP 224

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 31  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 87
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + ++  IA  + Y   +   ++ DL A  I+  +
Sbjct: 88  TEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAY-VERMNYVHRDLRAANILVGE 146
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 147 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 204
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 205 LTTKGRVP 212

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 31  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 87
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + ++  IA  + Y   +   ++ DL A  I+  +
Sbjct: 88  TEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAY-VERMNYVHRDLRAANILVGE 146
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 147 NLVCKVADFGLARLIEDNEWTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 204
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 205 LTTKGRVP 212

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFN-RSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K     +  P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 201 VWMGTWNGTTRVAIKTLKPGNMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 257
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 258 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV-ERMNYVHRDLRAANILVGE 316
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 317 NLVCKVADFGLGRLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 374
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 375 LTTKGRVP 382

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 94/198 (47%), Gaps = 8/198 (4%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
            ++ E G     VV  GK + Q+ +AVK     +  +  +F +EA+ + +L + +L    
Sbjct: 11  TLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSED-EFFQEAQTMMKLSHPKLVKFY 69
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
           G C +     +V EY+ N  L  +L     + ++ +  L +   + E + +  S  + ++
Sbjct: 70  GVCSKEYPIYIVTEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLES-HQFIH 127
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESV 234
            DL A   + D D+  ++S FG+ +   D +  S+      + ++ PE     + + +S 
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSD 187
Query: 235 MYSFGTLLLDLLSGKHIP 252
           +++FG L+ ++ S   +P
Sbjct: 188 VWAFGILMWEVFSLGKMP 205

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 14/188 (7%)
Query: 73  VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           V+ G      R+A+K        P+A  FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 34  VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 90
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM    L   L     + ++    + +A  IA  + Y   +   ++ DL A  I+  +
Sbjct: 91  MEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 149
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           ++  +++ FGL +        +R G  +   + +T PE    GR T +S ++SFG LL +
Sbjct: 150 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 207
Query: 245 LLSGKHIP 252
           L +   +P
Sbjct: 208 LTTKGRVP 215

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 26  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L     +        P   +  +++A  IA+ +
Sbjct: 86  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A   +  +D   ++  FG+ ++       R G      + +  PE
Sbjct: 146 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPE 204
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS 258
            L+ G  T  S ++SFG +L ++ +    P   +S+
Sbjct: 205 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 240

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 17  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L     +        P   +  +++A  IA+ +
Sbjct: 77  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A   +  +D   ++  FG+ ++       R G      + +  PE
Sbjct: 137 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPE 195
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS 258
            L+ G  T  S ++SFG +L ++ +    P   +S+
Sbjct: 196 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 231

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 73  VYKGKLE-NQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
           V+ G+L  +   +AVK    +  PD + +FL+EAR + Q  +  +  L+G C +     +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189
Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
           V E +        L   E   ++    L++    A  +EY  SK   ++ DL A   +  
Sbjct: 190 VMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESK-CCIHRDLAARNCLVT 247
Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           +    ++S FG+ +   DG   ++       + +T PE L  GR + ES ++SFG LL +
Sbjct: 248 EKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
Query: 245 LLS 247
             S
Sbjct: 308 TFS 310

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 26  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L     +        P   +  +++A  IA+ +
Sbjct: 86  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A   +  +D   ++  FG+ ++       R G      + +  PE
Sbjct: 146 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 204
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS 258
            L+ G  T  S ++SFG +L ++ +    P   +S+
Sbjct: 205 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 240

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 25  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L     +        P   +  +++A  IA+ +
Sbjct: 85  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A   +  +D   ++  FG+ ++       R G      + +  PE
Sbjct: 145 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 203
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS 258
            L+ G  T  S ++SFG +L ++ +    P   +S+
Sbjct: 204 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 239

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 19  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L     +        P   +  +++A  IA+ +
Sbjct: 79  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A   +  +D   ++  FG+ ++       R G      + +  PE
Sbjct: 139 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 197
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS 258
            L+ G  T  S ++SFG +L ++ +    P   +S+
Sbjct: 198 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 233

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 23  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L     +        P   +  +++A  IA+ +
Sbjct: 83  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A   +  +D   ++  FG+ ++       R G      + +  PE
Sbjct: 143 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 201
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS 258
            L+ G  T  S ++SFG +L ++ +    P   +S+
Sbjct: 202 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 237

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 32  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L     +        P   +  +++A  IA+ +
Sbjct: 92  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A   +  +D   ++  FG+ ++       R G      + +  PE
Sbjct: 152 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 210
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS 258
            L+ G  T  S ++SFG +L ++ +    P   +S+
Sbjct: 211 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 246

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 25  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L     +        P   +  +++A  IA+ +
Sbjct: 85  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A   +  +D   ++  FG+ ++       R G      + +  PE
Sbjct: 145 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 203
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS 258
            L+ G  T  S ++SFG +L ++ +    P   +S+
Sbjct: 204 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 239

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKH 143
           +AVK        +  +FL+EA  + ++++  L  LLG C       +V EYMP   L  +
Sbjct: 60  VAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDY 118
Query: 144 LFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203
           L     + +   + L +A  I+ A+EY   K+  ++ DL A   +  ++   +++ FGL 
Sbjct: 119 LRECNREEVTAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGENHVVKVADFGLS 177
Query: 204 KNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +    G +Y+ +      + +T PE L     + +S +++FG LL ++
Sbjct: 178 R-LMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEI 224

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 10/183 (5%)
Query: 73  VYKGKLE-NQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
           V+ G+L  +   +AVK    +  PD + +FL+EAR + Q  +  +  L+G C +     +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189
Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
           V E +        L   E   ++    L++    A  +EY  SK   ++ DL A   +  
Sbjct: 190 VMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESK-CCIHRDLAARNCLVT 247
Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           +    ++S FG+ +   DG   ++       + +T PE L  GR + ES ++SFG LL +
Sbjct: 248 EKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 307
Query: 245 LLS 247
             S
Sbjct: 308 TFS 310

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 54  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L     +        P   +  +++A  IA+ +
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A   +  +D   ++  FG+ ++       R G      + +  PE
Sbjct: 174 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 232
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS 258
            L+ G  T  S ++SFG +L ++ +    P   +S+
Sbjct: 233 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 268

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 22/216 (10%)
Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 22  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L              P   +  +++A  IA+ +
Sbjct: 82  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A   +  +D   ++  FG+ ++       R G      + +  PE
Sbjct: 142 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 200
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS 258
            L+ G  T  S ++SFG +L ++ +    P   +S+
Sbjct: 201 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 236

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 22/216 (10%)
Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 19  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--------PMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L     +        P   +  +++A  IA+ +
Sbjct: 79  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A      +D   ++  FG+ ++       R G      + +  PE
Sbjct: 139 AYLNAN-KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 197
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS 258
            L+ G  T  S ++SFG +L ++ +    P   +S+
Sbjct: 198 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 233

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 29  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 88  TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 146
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 147 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 22/216 (10%)
Query: 64  EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
           E G+ +  +VY+G      K E + R+A+K  N +A    R +FL EA  + +     + 
Sbjct: 32  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEAL 168
            LLG   +G   L++ E M    L  +L              P   +  +++A  IA+ +
Sbjct: 92  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
            Y  +  + ++ DL A   +  +D   ++  FG+ ++       R G      + +  PE
Sbjct: 152 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 210
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSS 258
            L+ G  T  S ++SFG +L ++ +    P   +S+
Sbjct: 211 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 246

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 31  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 89
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 90  TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 148
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 149 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 34  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 93  TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 151
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 152 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 29  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 88  TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 146
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 147 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 31  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 89
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 90  TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 148
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 149 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 34  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 93  TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 151
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 152 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 29  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 88  TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 146
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 147 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 34  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 93  TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 151
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 152 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 29  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 88  TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 146
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 147 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 42  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 100
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 101 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 159
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 160 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 218

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 33  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 91
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 92  TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 150
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 151 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 209

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 29  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 88  IEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 146
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 147 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 29  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 88  IEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 146
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 147 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 27  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 85
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 86  TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 144
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +++ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 145 NHLVKVADFGLSR-LMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
Query: 246 LSGKHIP-----PSHVSSFL 260
            +    P     PS V   L
Sbjct: 204 ATYGMSPYPGIDPSQVYELL 223

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 34  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 93  IEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 151
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 152 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 31  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 89
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 90  TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 148
Query: 192 DVNPRLSCFGLMKNSRDGRSYST------NLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+        + +T PE L   + + +S +++FG LL ++
Sbjct: 149 NHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 30  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 88
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 89  TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 147
Query: 192 DVNPRLSCFGLMKNSRDGRSYST------NLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+        + +T PE L   + + +S +++FG LL ++
Sbjct: 148 NHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 82/186 (44%), Gaps = 18/186 (9%)
Query: 79  ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
           +++  +AVK    ++    + F  EA  +  L++  +    G C EGD  ++V EYM + 
Sbjct: 41  QDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHG 100
Query: 139 TLAKHL--------FHWETQP---MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
            L K L           E  P   +  +  L +A  IA  + Y  S +  ++ DL     
Sbjct: 101 DLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS-QHFVHRDLATRNC 159
Query: 188 VFDDDVNPRLSCFGLMKNS------RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTL 241
           +  +++  ++  FG+ ++       R G      + + PPE +   + T ES ++S G +
Sbjct: 160 LVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVV 219
Query: 242 LLDLLS 247
           L ++ +
Sbjct: 220 LWEIFT 225

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 23/215 (10%)
Query: 66  GEKAPNVVYKG----KLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLG 120
           G+    VVY G    + +N+ + A+K  +R +       FL E   +  L +  +  L+G
Sbjct: 30  GKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIG 89
Query: 121 CCC--EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERAL 178
                EG   +L+  YM +  L + +   +  P    + +   L +A  +EY  ++++ +
Sbjct: 90  IMLPPEGLPHVLLP-YMCHGDLLQFIRSPQRNPTVKDL-ISFGLQVARGMEYL-AEQKFV 146
Query: 179 YHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVT 230
           + DL A   + D+    +++ FGL ++  D   YS          + +T  E L+T R T
Sbjct: 147 HRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFT 206
Query: 231 PESVMYSFGTLLLDLLSG-----KHIPPSHVSSFL 260
            +S ++SFG LL +LL+      +HI P  ++ FL
Sbjct: 207 TKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFL 241

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 17/201 (8%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 27  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 85
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 86  TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 144
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           +   +++ FGL +        +  G  +   + +T PE L   + + +S +++FG LL +
Sbjct: 145 NHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWE 202
Query: 245 LLSGKHIP-----PSHVSSFL 260
           + +    P     PS V   L
Sbjct: 203 IATYGMSPYPGIDPSQVYELL 223

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 17/201 (8%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 27  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 85
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 86  IEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 144
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           +   +++ FGL +        +  G  +   + +T PE L   + + +S +++FG LL +
Sbjct: 145 NHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWE 202
Query: 245 LLSGKHIP-----PSHVSSFL 260
           + +    P     PS V   L
Sbjct: 203 IATYGMSPYPGIDPSQVYELL 223

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 275 VYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 333
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ +L A   +  +
Sbjct: 334 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRNLAARNCLVGE 392
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 393 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 451

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 236 VYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ +L A   +  +
Sbjct: 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL-EKKNFIHRNLAARNCLVGE 353
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +   +++ FGL +    G +Y+ +      + +T PE L   + + +S +++FG LL ++
Sbjct: 354 NHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/189 (22%), Positives = 81/189 (42%), Gaps = 21/189 (11%)
Query: 79  ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
           +++  +AVK          + F  EA  +  L++  +    G C +GD  ++V EYM + 
Sbjct: 43  KDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHG 102
Query: 139 TLAKHL--------FHWETQP------MKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
            L K L           + QP      +  +  L +A  IA  + Y  S +  ++ DL  
Sbjct: 103 DLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS-QHFVHRDLAT 161
Query: 185 YRIVFDDDVNPRLSCFGLMKNS------RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSF 238
              +   ++  ++  FG+ ++       R G      + + PPE +   + T ES ++SF
Sbjct: 162 RNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSF 221
Query: 239 GTLLLDLLS 247
           G +L ++ +
Sbjct: 222 GVILWEIFT 230

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 85/181 (46%), Gaps = 12/181 (6%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 34  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 93  TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 151
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           +   +++ FGL +        +  G  +   + +T PE L   + + +S +++FG LL +
Sbjct: 152 NHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWE 209
Query: 245 L 245
           +
Sbjct: 210 I 210

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 85/181 (46%), Gaps = 12/181 (6%)
Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 30  VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 88
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M    L  +L     Q +   + L +A  I+ A+EY   K+  ++ DL A   +  +
Sbjct: 89  IEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL-EKKNFIHRDLAARNCLVGE 147
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
           +   +++ FGL +        +  G  +   + +T PE L   + + +S +++FG LL +
Sbjct: 148 NHLVKVADFGLSRLMTGDTXTAHAGAKFP--IKWTAPESLAYNKFSIKSDVWAFGVLLWE 205
Query: 245 L 245
           +
Sbjct: 206 I 206

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 14/190 (7%)
Query: 84  IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTL 140
           +AVK       P  R  + +E   +  L +  +    GCC +  E+   LV EY+P  +L
Sbjct: 46  VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200
             +L       +  A  L  A  I E + Y  S +  ++ +L A  ++ D+D   ++  F
Sbjct: 106 RDYL---PRHSIGLAQLLLFAQQICEGMAYLHS-QHYIHRNLAARNVLLDNDRLVKIGDF 161
Query: 201 GLMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP 253
           GL K   +G  Y        + + +  PE L+  +    S ++SFG  L +LL+      
Sbjct: 162 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ 221
Query: 254 SHVSSFLWLV 263
           S  + FL L+
Sbjct: 222 SPPTKFLELI 231

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V EYM N +L   L   + Q   ++  
Sbjct: 62  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 121
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 122 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           T      + +T PE +   + T  S ++S+G +L +++S
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V EYM N +L   L   + Q   ++  
Sbjct: 79  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 138
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 139 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 194
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           T      + +T PE +   + T  S ++S+G +L +++S
Sbjct: 195 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V EYM N +L   L   + Q   ++  
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYT 206
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           T      + +T PE +   + T  S ++S+G +L +++S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V EYM N +L   L   + Q   ++  
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           T      + +T PE +   + T  S ++S+G +L +++S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V EYM N +L   L   + Q   ++  
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           T      + +T PE +   + T  S ++S+G +L +++S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V EYM N +L   L   + Q   ++  
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           T      + +T PE +   + T  S ++S+G +L +++S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V EYM N +L   L   + Q   ++  
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           T      + +T PE +   + T  S ++S+G +L +++S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 79/193 (40%), Gaps = 30/193 (15%)
Query: 84  IAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142
           +AVK     A  D +  F  EA  + +  N  +  LLG C  G    L+ EYM    L +
Sbjct: 80  VAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNE 139
Query: 143 HLFHWETQ----------------------PMKWAMRLRVALHIAEALEYCTSKERALYH 180
            L                            P+  A +L +A  +A  + Y  S+ + ++ 
Sbjct: 140 FLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAY-LSERKFVHR 198
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESV 234
           DL     +  +++  +++ FGL +N      Y  +      + + PPE +   R T ES 
Sbjct: 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESD 258
Query: 235 MYSFGTLLLDLLS 247
           ++++G +L ++ S
Sbjct: 259 VWAYGVVLWEIFS 271

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V EYM N +L   L   + Q   ++  
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           T      + +T PE +   + T  S ++S+G +L +++S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V EYM N +L   L   + Q   ++  
Sbjct: 89  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 148
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 149 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 204
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           T      + +T PE +   + T  S ++S+G +L +++S
Sbjct: 205 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V EYM N +L   L   + Q   ++  
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLV 150
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT 206
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           T      + +T PE +   + T  S ++S+G +L +++S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 88/190 (46%), Gaps = 19/190 (10%)
Query: 73  VYKGKLEN-----QFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGD 126
           VYKG L+      +  +A+K          R  FL EA  +GQ  +  +  L G   +  
Sbjct: 60  VYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK 119
Query: 127 ERLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
             +++ EYM N  L K L     E   ++    LR    IA  ++Y  +    ++ DL A
Sbjct: 120 PMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGMKYLANMNY-VHRDLAA 175
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDG--RSYSTN-----LAFTPPEYLRTGRVTPESVMYS 237
             I+ + ++  ++S FGL +   D    +Y+T+     + +T PE +   + T  S ++S
Sbjct: 176 RNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWS 235
Query: 238 FGTLLLDLLS 247
           FG ++ ++++
Sbjct: 236 FGIVMWEVMT 245

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 20/188 (10%)
Query: 79  ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
           +++  +AVK    ++    + F  EA  +  L+++ +    G C EG   L+V EYM + 
Sbjct: 69  QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 128
Query: 139 TL----------AKHLFHWET---QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
            L          AK L   E     P+     L VA  +A  + Y       ++ DL   
Sbjct: 129 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATR 187
Query: 186 RIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFG 239
             +    +  ++  FG+ ++       R G      + + PPE +   + T ES ++SFG
Sbjct: 188 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFG 247
Query: 240 TLLLDLLS 247
            +L ++ +
Sbjct: 248 VVLWEIFT 255

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V E M N +L   L   + Q   ++  
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLV 150
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S   A++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           T      + +T PE +   + T  S ++S+G +L +++S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 14/190 (7%)
Query: 84  IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTL 140
           +AVK       P  R  + +E   +  L +  +    GCC +  E+   LV EY+P  +L
Sbjct: 46  VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200
             +L       +  A  L  A  I E + Y  + +  ++ +L A  ++ D+D   ++  F
Sbjct: 106 RDYL---PRHSIGLAQLLLFAQQICEGMAYLHA-QHYIHRNLAARNVLLDNDRLVKIGDF 161
Query: 201 GLMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP 253
           GL K   +G  Y        + + +  PE L+  +    S ++SFG  L +LL+      
Sbjct: 162 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ 221
Query: 254 SHVSSFLWLV 263
           S  + FL L+
Sbjct: 222 SPPTKFLELI 231

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/187 (21%), Positives = 82/187 (43%), Gaps = 12/187 (6%)
Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V+        ++AVK     +      FL EA  +  L++ +L  L     + +   ++ 
Sbjct: 31  VWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 88
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
           E+M   +L   L   E         +  +  IAE + +   +   ++ DL A  I+    
Sbjct: 89  EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSAS 147
Query: 193 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +  +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL+++
Sbjct: 148 LVCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGSFTIKSDVWSFGILLMEI 205
Query: 246 LSGKHIP 252
           ++   IP
Sbjct: 206 VTYGRIP 212

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 20/188 (10%)
Query: 79  ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
           +++  +AVK    ++    + F  EA  +  L+++ +    G C EG   L+V EYM + 
Sbjct: 40  QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 99
Query: 139 TL----------AKHLFHWET---QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
            L          AK L   E     P+     L VA  +A  + Y       ++ DL   
Sbjct: 100 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATR 158
Query: 186 RIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFG 239
             +    +  ++  FG+ ++       R G      + + PPE +   + T ES ++SFG
Sbjct: 159 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFG 218
Query: 240 TLLLDLLS 247
            +L ++ +
Sbjct: 219 VVLWEIFT 226

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 81/189 (42%), Gaps = 11/189 (5%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 42  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 102 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 159
Query: 202 LMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS 254
           L K     + +        + + +  PE L   + +  S ++SFG +L +L +      S
Sbjct: 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219
Query: 255 HVSSFLWLV 263
             + F+ ++
Sbjct: 220 PPAEFMRMI 228

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 20/188 (10%)
Query: 79  ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
           +++  +AVK    ++    + F  EA  +  L+++ +    G C EG   L+V EYM + 
Sbjct: 46  QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 105
Query: 139 TL----------AKHLFHWET---QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
            L          AK L   E     P+     L VA  +A  + Y       ++ DL   
Sbjct: 106 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH-FVHRDLATR 164
Query: 186 RIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFG 239
             +    +  ++  FG+ ++       R G      + + PPE +   + T ES ++SFG
Sbjct: 165 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFG 224
Query: 240 TLLLDLLS 247
            +L ++ +
Sbjct: 225 VVLWEIFT 232

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/187 (21%), Positives = 82/187 (43%), Gaps = 12/187 (6%)
Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V+        ++AVK     +      FL EA  +  L++ +L  L     + +   ++ 
Sbjct: 204 VWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 261
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
           E+M   +L   L   E         +  +  IAE + +   +   ++ DL A  I+    
Sbjct: 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSAS 320
Query: 193 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           +  +++ FGL +        +R+G  +   + +T PE +  G  T +S ++SFG LL+++
Sbjct: 321 LVCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGSFTIKSDVWSFGILLMEI 378
Query: 246 LSGKHIP 252
           ++   IP
Sbjct: 379 VTYGRIP 385

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 81/189 (42%), Gaps = 11/189 (5%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 43  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 102
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ +L    I+ +++   ++  FG
Sbjct: 103 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRNLATRNILVENENRVKIGDFG 160
Query: 202 LMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS 254
           L K     + Y        + + +  PE L   + +  S ++SFG +L +L +      S
Sbjct: 161 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 220
Query: 255 HVSSFLWLV 263
             + F+ ++
Sbjct: 221 PPAEFMRMI 229

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 8/180 (4%)
Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V+        ++AVK     +      FL EA  +  L++ +L  L     + +   ++ 
Sbjct: 198 VWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 255
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
           E+M   +L   L   E         +  +  IAE + +   +   ++ DL A  I+    
Sbjct: 256 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSAS 314
Query: 193 VNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
           +  +++ FGL   +R G  +   + +T PE +  G  T +S ++SFG LL+++++   IP
Sbjct: 315 LVCKIADFGL---ARVGAKFP--IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 369

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 79/161 (49%), Gaps = 15/161 (9%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  + +L G   +    +++ E+M N +L   L   + Q   ++  
Sbjct: 79  RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLV 138
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS---Y 212
             LR    IA  ++Y  +    ++ DL A  I+ + ++  ++S FGL +   D  S   Y
Sbjct: 139 GMLR---GIAAGMKYL-ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 194
Query: 213 STNLA------FTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           ++ L       +T PE ++  + T  S ++S+G ++ +++S
Sbjct: 195 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 235

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G    G   ++V EYM N +L   L   + Q   M+  
Sbjct: 95  RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLV 154
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSYS 213
             LR    +   + Y  S    ++ DL A  ++ D ++  ++S FGL +   D    +Y+
Sbjct: 155 GMLR---GVGAGMRYL-SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYT 210
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           T      + +T PE +     +  S ++SFG ++ ++L+
Sbjct: 211 TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V E M N +L   L   + Q   ++  
Sbjct: 62  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLV 121
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 122 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           T      + +T PE +   + T  S ++S+G +L +++S
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 11/189 (5%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 49  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 108
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 109 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 166
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS 254
           L K         +      + + +  PE L   + +  S ++SFG +L +L +      S
Sbjct: 167 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 226
Query: 255 HVSSFLWLV 263
             + F+ ++
Sbjct: 227 PPAEFMRMI 235

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 76  GKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE 133
           GK +   ++AVK    +A  D ++  + E + +  L ++  + NLLG C  G   L++ E
Sbjct: 63  GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 122
Query: 134 YMPNDTLAKHLFHW--------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
           Y     L   L           + +P++    L  +  +A+ + +  SK   ++ D+ A 
Sbjct: 123 YCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK-NCIHRDVAAR 181
Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFG 239
            ++  +    ++  FGL ++  +  +Y         + +  PE +     T +S ++S+G
Sbjct: 182 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 241
Query: 240 TLLLDLLS 247
            LL ++ S
Sbjct: 242 ILLWEIFS 249

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 11/189 (5%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 45  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 105 DYL-QAHAERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 162
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS 254
           L K         +      + + +  PE L   + +  S ++SFG +L +L +      S
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 222
Query: 255 HVSSFLWLV 263
             + F+ ++
Sbjct: 223 PPAEFMRMI 231

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 14/190 (7%)
Query: 84  IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCE-GDERL-LVAEYMPNDTL 140
           +AVK     A P  R  + +E   +  L +  +    GCC + G   L LV EY+P  +L
Sbjct: 63  VAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSL 122
Query: 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200
             +L       +  A  L  A  I E + Y  + +  ++ DL A  ++ D+D   ++  F
Sbjct: 123 RDYL---PRHSIGLAQLLLFAQQICEGMAYLHA-QHYIHRDLAARNVLLDNDRLVKIGDF 178
Query: 201 GLMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP 253
           GL K   +G           + + +  PE L+  +    S ++SFG  L +LL+      
Sbjct: 179 GLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ 238
Query: 254 SHVSSFLWLV 263
           S  + FL L+
Sbjct: 239 SPPTKFLELI 248

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 11/189 (5%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 73  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 132
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 133 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 190
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS 254
           L K         +      + + +  PE L   + +  S ++SFG +L +L +      S
Sbjct: 191 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 250
Query: 255 HVSSFLWLV 263
             + F+ ++
Sbjct: 251 PPAEFMRMI 259

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 11/189 (5%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 48  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 107
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 108 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 165
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS 254
           L K         +      + + +  PE L   + +  S ++SFG +L +L +      S
Sbjct: 166 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 225
Query: 255 HVSSFLWLV 263
             + F+ ++
Sbjct: 226 PPAEFMRMI 234

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 11/189 (5%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 47  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 106
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 107 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 164
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS 254
           L K         +      + + +  PE L   + +  S ++SFG +L +L +      S
Sbjct: 165 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 224
Query: 255 HVSSFLWLV 263
             + F+ ++
Sbjct: 225 PPAEFMRMI 233

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 11/189 (5%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 42  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 102 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 159
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS 254
           L K         +      + + +  PE L   + +  S ++SFG +L +L +      S
Sbjct: 160 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219
Query: 255 HVSSFLWLV 263
             + F+ ++
Sbjct: 220 PPAEFMRMI 228

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 11/189 (5%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 40  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 99
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 100 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 157
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS 254
           L K         +      + + +  PE L   + +  S ++SFG +L +L +      S
Sbjct: 158 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 217
Query: 255 HVSSFLWLV 263
             + F+ ++
Sbjct: 218 PPAEFMRMI 226

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 11/189 (5%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 45  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 105 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 162
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS 254
           L K         +      + + +  PE L   + +  S ++SFG +L +L +      S
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 222
Query: 255 HVSSFLWLV 263
             + F+ ++
Sbjct: 223 PPAEFMRMI 231

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 11/189 (5%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 60  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 120 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 177
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS 254
           L K         +      + + +  PE L   + +  S ++SFG +L +L +      S
Sbjct: 178 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 237
Query: 255 HVSSFLWLV 263
             + F+ ++
Sbjct: 238 PPAEFMRMI 246

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G   +    ++V E M N +L   L   + Q   ++  
Sbjct: 91  RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLV 150
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 151 GMLR---GIASGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           T      + +T PE +   + T  S ++S+G +L +++S
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/188 (21%), Positives = 84/188 (44%), Gaps = 17/188 (9%)
Query: 76  GKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE 133
           GK +   ++AVK    +A  D ++  + E + +  L ++  + NLLG C  G   L++ E
Sbjct: 71  GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 134 YMPNDTLAKHLFHW--------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
           Y     L   L           + +P++    L  +  +A+ + +  SK   ++ D+ A 
Sbjct: 131 YCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK-NCIHRDVAAR 189
Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFG 239
            ++  +    ++  FGL ++  +  +Y         + +  PE +     T +S ++S+G
Sbjct: 190 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 249
Query: 240 TLLLDLLS 247
            LL ++ S
Sbjct: 250 ILLWEIFS 257

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 11/189 (5%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 46  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 105
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 106 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 163
Query: 202 LMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS 254
           L K     +          + + +  PE L   + +  S ++SFG +L +L +      S
Sbjct: 164 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 223
Query: 255 HVSSFLWLV 263
             + F+ ++
Sbjct: 224 PPAEFMRMI 232

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 90/194 (46%), Gaps = 15/194 (7%)
Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG         +  +A+K  N +  P A  +F++EA  +  + +  L  LL
Sbjct: 47  GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLL 106
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
           G C     + LV + MP+  L +++ H     +   + L   + IA+ + Y   + R ++
Sbjct: 107 GVCLSPTIQ-LVTQLMPHGCLLEYV-HEHKDNIGSQLLLNWCVQIAKGMMYLEER-RLVH 163
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYL-----RTGRVTPES 233
            DL A  ++     + +++ FGL +    D + Y+ +    P +++        + T +S
Sbjct: 164 RDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQS 223
Query: 234 VMYSFGTLLLDLLS 247
            ++S+G  + +L++
Sbjct: 224 DVWSYGVTIWELMT 237

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 11/189 (5%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 42  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 102 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 159
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS 254
           L K         +      + + +  PE L   + +  S ++SFG +L +L +      S
Sbjct: 160 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 219
Query: 255 HVSSFLWLV 263
             + F+ ++
Sbjct: 220 PPAEFMRMI 228

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  + +L G   +    ++V EYM N +L   L   + Q   ++  
Sbjct: 68  RDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLV 127
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    I+  ++Y  S    ++ DL A  I+ + ++  ++S FGL +   D    +Y+
Sbjct: 128 GMLR---GISAGMKYL-SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 183
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           T      + +T PE +   + T  S ++S+G ++ +++S
Sbjct: 184 TRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS 222

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 11/189 (5%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 60  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 120 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 177
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS 254
           L K         +      + + +  PE L   + +  S ++SFG +L +L +      S
Sbjct: 178 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 237
Query: 255 HVSSFLWLV 263
             + F+ ++
Sbjct: 238 PPAEFMRMI 246

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 11/189 (5%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ EY+P  +L 
Sbjct: 41  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 100
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
            +L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 101 DYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 158
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS 254
           L K         +      + + +  PE L   + +  S ++SFG +L +L +      S
Sbjct: 159 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 218
Query: 255 HVSSFLWLV 263
             + F+ ++
Sbjct: 219 PPAEFMRMI 227

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 66  GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
           G+ A   VY    +     +A+++ N    P     + E   + + +N  + N L     
Sbjct: 29  GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
           GDE  +V EY+   +L   +        + A   R  L   +ALE+  S +  ++ D+ +
Sbjct: 89  GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRDIKS 144
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
             I+   D + +L+ FG        +S  + +  TP    PE +      P+  ++S G 
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 241 LLLDLLSGKHIPP 253
           + ++++ G+  PP
Sbjct: 205 MAIEMIEGE--PP 215

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  +  L G    G   ++V EYM N +L   L   + Q   M+  
Sbjct: 95  RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLV 154
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL---MKNSRDGRSY 212
             LR    +   + Y  S    ++ DL A  ++ D ++  ++S FGL   +++  D    
Sbjct: 155 GMLR---GVGAGMRYL-SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXT 210
Query: 213 STN----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           +T     + +T PE +     +  S ++SFG ++ ++L+
Sbjct: 211 TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA 249

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 90/194 (46%), Gaps = 15/194 (7%)
Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG         +  +A+K  N +  P A  +F++EA  +  + +  L  LL
Sbjct: 24  GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLL 83
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
           G C     + LV + MP+  L +++ H     +   + L   + IA+ + Y   + R ++
Sbjct: 84  GVCLSPTIQ-LVTQLMPHGCLLEYV-HEHKDNIGSQLLLNWCVQIAKGMMYLEER-RLVH 140
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYL-----RTGRVTPES 233
            DL A  ++     + +++ FGL +    D + Y+ +    P +++        + T +S
Sbjct: 141 RDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQS 200
Query: 234 VMYSFGTLLLDLLS 247
            ++S+G  + +L++
Sbjct: 201 DVWSYGVTIWELMT 214

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 14/174 (8%)
Query: 84  IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTL 140
           +AVK       P  R  +  E   +  L +  +    GCC +  E+   LV EY+P  +L
Sbjct: 40  VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 99
Query: 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200
             +L       +  A  L  A  I E + Y  + +  ++  L A  ++ D+D   ++  F
Sbjct: 100 RDYL---PRHCVGLAQLLLFAQQICEGMAYLHA-QHYIHRALAARNVLLDNDRLVKIGDF 155
Query: 201 GLMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           GL K   +G  Y        + + +  PE L+  +    S ++SFG  L +LL+
Sbjct: 156 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 14/174 (8%)
Query: 84  IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTL 140
           +AVK       P  R  +  E   +  L +  +    GCC +  E+   LV EY+P  +L
Sbjct: 41  VAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL 100
Query: 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200
             +L       +  A  L  A  I E + Y  + +  ++  L A  ++ D+D   ++  F
Sbjct: 101 RDYL---PRHCVGLAQLLLFAQQICEGMAYLHA-QHYIHRALAARNVLLDNDRLVKIGDF 156
Query: 201 GLMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           GL K   +G  Y        + + +  PE L+  +    S ++SFG  L +LL+
Sbjct: 157 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 66  GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
           G+ A   VY    +     +A+++ N    P     + E   + + +N  + N L     
Sbjct: 30  GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 89
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
           GDE  +V EY+   +L   +        + A   R  L   +ALE+  S +  ++ D+ +
Sbjct: 90  GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRDIKS 145
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
             I+   D + +L+ FG        +S  + +  TP    PE +      P+  ++S G 
Sbjct: 146 DNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 205
Query: 241 LLLDLLSGKHIPP 253
           + ++++ G+  PP
Sbjct: 206 MAIEMIEGE--PP 216

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 66  GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
           G+ A   VY    +     +A+++ N    P     + E   + + +N  + N L     
Sbjct: 29  GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
           GDE  +V EY+   +L   +        + A   R  L   +ALE+  S +  ++ D+ +
Sbjct: 89  GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRDIKS 144
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
             I+   D + +L+ FG        +S  + +  TP    PE +      P+  ++S G 
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 241 LLLDLLSGKHIPP 253
           + ++++ G+  PP
Sbjct: 205 MAIEMIEGE--PP 215

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 66  GEKAPNVVYKGKLENQ----FRIAVK--RFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
           GE     V +G L+ +     ++AVK  + + S+  +  +FL EA  +    +  +  LL
Sbjct: 43  GEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLL 102
Query: 120 GCCCEGDER-----LLVAEYMPNDTLAKHLFH--WETQPMKWAMR--LRVALHIAEALEY 170
           G C E   +     +++  +M    L  +L +   ET P    ++  L+  + IA  +EY
Sbjct: 103 GVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEY 162
Query: 171 CTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPEYL 224
            +++   L+ DL A   +  DD+   ++ FGL K        R GR     + +   E L
Sbjct: 163 LSNRN-FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL 221
Query: 225 RTGRVTPESVMYSFGTLLLDLLSGKHIP 252
                T +S +++FG  + ++ +    P
Sbjct: 222 ADRVYTSKSDVWAFGVTMWEIATRGMTP 249

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 27/197 (13%)
Query: 75  KGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
           K K     ++AVK     A      D    +E  + +G+ +N  + NLLG C +     +
Sbjct: 54  KDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYV 111
Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMR--------------LRVALHIAEALEYCTSKER 176
           + EY     L ++L   E   ++++                +  A  +A  +EY  SK +
Sbjct: 112 IVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-K 170
Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVT 230
            ++ DL A  ++  +D   +++ FGL ++    D    +TN    + +  PE L     T
Sbjct: 171 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 231 PESVMYSFGTLLLDLLS 247
            +S ++SFG LL ++ +
Sbjct: 231 HQSDVWSFGVLLWEIFT 247

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 22/212 (10%)
Query: 41  FCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQF 100
           +C+ +I+  +     F   +    HG    +V  K  +E  F    +R N        +F
Sbjct: 36  WCDLNIKE-KIGAGSFGTVHRAEWHGS---DVAVKILMEQDFH--AERVN--------EF 81
Query: 101 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE--TQPMKWAMRL 158
           L E   + +LR+  +   +G   +     +V EY+   +L + L H     + +    RL
Sbjct: 82  LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERRRL 140
Query: 159 RVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA 217
            +A  +A+ + Y  ++   + H DL +  ++ D     ++  FGL +        S   A
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA 200
Query: 218 FTP----PEYLRTGRVTPESVMYSFGTLLLDL 245
            TP    PE LR      +S +YSFG +L +L
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 66  GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
           G+ A   VY    +     +A+++ N    P     + E   + + +N  + N L     
Sbjct: 29  GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
           GDE  +V EY+   +L   +        + A   R  L   +ALE+  S +  ++ D+ +
Sbjct: 89  GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRDIKS 144
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
             I+   D + +L+ FG        +S  + +  TP    PE +      P+  ++S G 
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 241 LLLDLLSGKHIPP 253
           + ++++ G+  PP
Sbjct: 205 MAIEMIEGE--PP 215

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  + +L G   +    +++ EYM N +L   L   + +   ++  
Sbjct: 75  RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLV 134
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    I   ++Y  S   A++ DL A  I+ + ++  ++S FG+ +   D    +Y+
Sbjct: 135 GMLR---GIGSGMKYL-SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 190
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           T      + +T PE +   + T  S ++S+G ++ +++S
Sbjct: 191 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/189 (21%), Positives = 81/189 (42%), Gaps = 11/189 (5%)
Query: 84  IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTLA 141
           +AVK+   S     R F  E   +  L++  +    G C     R   L+ E++P  +L 
Sbjct: 45  VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLR 104
Query: 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201
           ++L     + +     L+    I + +EY  +K R ++ DL    I+ +++   ++  FG
Sbjct: 105 EYL-QKHKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFG 162
Query: 202 LMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS 254
           L K         +      + + +  PE L   + +  S ++SFG +L +L +      S
Sbjct: 163 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 222
Query: 255 HVSSFLWLV 263
             + F+ ++
Sbjct: 223 PPAEFMRMI 231

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  + +L G    G   ++V E+M N  L   L   + Q   ++  
Sbjct: 89  RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLV 148
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    IA  + Y       ++ DL A  I+ + ++  ++S FGL +   D     Y+
Sbjct: 149 GMLR---GIAAGMRYLADMG-YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYT 204
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           T      + +T PE ++  + T  S ++S+G ++ +++S
Sbjct: 205 TTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 84/192 (43%), Gaps = 21/192 (10%)
Query: 76  GKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE 133
           GK +   ++AVK    +A  D ++  + E + +  L ++  + NLLG C  G   L++ E
Sbjct: 71  GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 134 YMPNDTLAKHLFH----WETQP----MKWAMRLRVALH----IAEALEYCTSKERALYHD 181
           Y     L   L       ET P        +  R  LH    +A+ + +  SK   ++ D
Sbjct: 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKN-CIHRD 189
Query: 182 LNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVM 235
           + A  ++  +    ++  FGL ++  +  +Y         + +  PE +     T +S +
Sbjct: 190 VAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 249
Query: 236 YSFGTLLLDLLS 247
           +S+G LL ++ S
Sbjct: 250 WSYGILLWEIFS 261

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 27/197 (13%)
Query: 75  KGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
           K K     ++AVK     A      D    +E  + +G+ +N  + NLLG C +     +
Sbjct: 54  KDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYV 111
Query: 131 VAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTSKER 176
           + EY     L ++L               H   + +     +  A  +A  +EY  SK +
Sbjct: 112 IVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-K 170
Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVT 230
            ++ DL A  ++  +D   +++ FGL ++    D    +TN    + +  PE L     T
Sbjct: 171 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 231 PESVMYSFGTLLLDLLS 247
            +S ++SFG LL ++ +
Sbjct: 231 HQSDVWSFGVLLWEIFT 247

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 4/152 (2%)
Query: 101 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRV 160
           L E + + ++ +R + +L       D   LV   M    L  H++H        A  +  
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 161 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS---TNLA 217
           A  I   LE    +ER +Y DL    I+ DD  + R+S  GL  +  +G++       + 
Sbjct: 292 AAEICCGLED-LHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK 249
           +  PE ++  R T     ++ G LL ++++G+
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 67/152 (44%), Gaps = 4/152 (2%)
Query: 101 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRV 160
           L E + + ++ +R + +L       D   LV   M    L  H++H        A  +  
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY 291
Query: 161 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS---TNLA 217
           A  I   LE    +ER +Y DL    I+ DD  + R+S  GL  +  +G++       + 
Sbjct: 292 AAEICCGLED-LHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK 249
           +  PE ++  R T     ++ G LL ++++G+
Sbjct: 351 YMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/201 (20%), Positives = 88/201 (43%), Gaps = 30/201 (14%)
Query: 76  GKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE 133
           GK +   ++AVK    +A  D ++  + E + +  L ++  + NLLG C  G   L++ E
Sbjct: 56  GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 115
Query: 134 Y----------------MPNDTLA-----KHLFHWETQPMKWAMRLRVALHIAEALEYCT 172
           Y                M   +LA     + L   + +P++    L  +  +A+ + +  
Sbjct: 116 YCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLA 175
Query: 173 SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRT 226
           SK   ++ D+ A  ++  +    ++  FGL ++  +  +Y         + +  PE +  
Sbjct: 176 SK-NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFD 234
Query: 227 GRVTPESVMYSFGTLLLDLLS 247
              T +S ++S+G LL ++ S
Sbjct: 235 CVYTVQSDVWSYGILLWEIFS 255

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 66  GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
           G+ A   VY    +     +A+++ N    P     + E   + + +N  + N L     
Sbjct: 30  GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 89
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
           GDE  +V EY+   +L   +        + A   R  L   +ALE+  S +  ++ ++ +
Sbjct: 90  GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRNIKS 145
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
             I+   D + +L+ FG        +S  + +  TP    PE +      P+  ++S G 
Sbjct: 146 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 205
Query: 241 LLLDLLSGKHIPP 253
           + ++++ G+  PP
Sbjct: 206 MAIEMIEGE--PP 216

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 27/197 (13%)
Query: 75  KGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
           K K     ++AVK     A      D    +E  + +G+ +N  + NLLG C +     +
Sbjct: 46  KDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYV 103
Query: 131 VAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTSKER 176
           + EY     L ++L               H   + +     +  A  +A  +EY  SK +
Sbjct: 104 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-K 162
Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVT 230
            ++ DL A  ++  +D   +++ FGL ++    D    +TN    + +  PE L     T
Sbjct: 163 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 222
Query: 231 PESVMYSFGTLLLDLLS 247
            +S ++SFG LL ++ +
Sbjct: 223 HQSDVWSFGVLLWEIFT 239

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 27/197 (13%)
Query: 75  KGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
           K K     ++AVK     A      D    +E  + +G+ +N  + NLLG C +     +
Sbjct: 47  KDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYV 104
Query: 131 VAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTSKER 176
           + EY     L ++L               H   + +     +  A  +A  +EY  SK +
Sbjct: 105 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-K 163
Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVT 230
            ++ DL A  ++  +D   +++ FGL ++    D    +TN    + +  PE L     T
Sbjct: 164 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 223
Query: 231 PESVMYSFGTLLLDLLS 247
            +S ++SFG LL ++ +
Sbjct: 224 HQSDVWSFGVLLWEIFT 240

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 27/197 (13%)
Query: 75  KGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
           K K     ++AVK     A      D    +E  + +G+ +N  + NLLG C +     +
Sbjct: 54  KDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYV 111
Query: 131 VAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTSKER 176
           + EY     L ++L               H   + +     +  A  +A  +EY  SK +
Sbjct: 112 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-K 170
Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVT 230
            ++ DL A  ++  +D   +++ FGL ++    D    +TN    + +  PE L     T
Sbjct: 171 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 231 PESVMYSFGTLLLDLLS 247
            +S ++SFG LL ++ +
Sbjct: 231 HQSDVWSFGVLLWEIFT 247

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 27/197 (13%)
Query: 75  KGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
           K K     ++AVK     A      D    +E  + +G+ +N  + NLLG C +     +
Sbjct: 43  KDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYV 100
Query: 131 VAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTSKER 176
           + EY     L ++L               H   + +     +  A  +A  +EY  SK +
Sbjct: 101 IVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-K 159
Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVT 230
            ++ DL A  ++  +D   +++ FGL ++    D    +TN    + +  PE L     T
Sbjct: 160 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 219
Query: 231 PESVMYSFGTLLLDLLS 247
            +S ++SFG LL ++ +
Sbjct: 220 HQSDVWSFGVLLWEIFT 236

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/212 (23%), Positives = 90/212 (42%), Gaps = 22/212 (10%)
Query: 41  FCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQF 100
           +C+ +I+  +     F   +    HG    +V  K  +E  F    +R N        +F
Sbjct: 36  WCDLNIKE-KIGAGSFGTVHRAEWHGS---DVAVKILMEQDFH--AERVN--------EF 81
Query: 101 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE--TQPMKWAMRL 158
           L E   + +LR+  +   +G   +     +V EY+   +L + L H     + +    RL
Sbjct: 82  LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERRRL 140
Query: 159 RVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA 217
            +A  +A+ + Y  ++   + H +L +  ++ D     ++  FGL +        S + A
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA 200
Query: 218 FTP----PEYLRTGRVTPESVMYSFGTLLLDL 245
            TP    PE LR      +S +YSFG +L +L
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWEL 232

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 77/161 (47%), Gaps = 15/161 (9%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  + +L G   +    +++ E+M N +L   L   + Q   ++  
Sbjct: 53  RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLV 112
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS---Y 212
             LR    IA  ++Y       ++  L A  I+ + ++  ++S FGL +   D  S   Y
Sbjct: 113 GMLR---GIAAGMKYLADMNY-VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 168
Query: 213 STNLA------FTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           ++ L       +T PE ++  + T  S ++S+G ++ +++S
Sbjct: 169 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 209

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 83  RIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
           ++AVK     A      D    +E  + +G+ +N  + NLLG C +     ++ EY    
Sbjct: 103 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKG 160
Query: 139 TLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
            L ++L               H   + +     +  A  +A  +EY  SK + ++ DL A
Sbjct: 161 NLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAA 219
Query: 185 YRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVTPESVMYSF 238
             ++  +D   +++ FGL ++    D    +TN    + +  PE L     T +S ++SF
Sbjct: 220 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 279
Query: 239 GTLLLDLLS 247
           G LL ++ +
Sbjct: 280 GVLLWEIFT 288

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 27/197 (13%)
Query: 75  KGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
           K K     ++AVK     A      D    +E  + +G+ +N  + NLLG C +     +
Sbjct: 39  KDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYV 96
Query: 131 VAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTSKER 176
           + EY     L ++L               H   + +     +  A  +A  +EY  SK +
Sbjct: 97  IVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-K 155
Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVT 230
            ++ DL A  ++  +D   +++ FGL ++    D    +TN    + +  PE L     T
Sbjct: 156 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 215
Query: 231 PESVMYSFGTLLLDLLS 247
            +S ++SFG LL ++ +
Sbjct: 216 HQSDVWSFGVLLWEIFT 232

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 83  RIAVKRFNRS--AWPDARQFLE-EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139
           ++A+K  N+   A  D +  +E E   +  LR+  +  L       DE ++V EY  N+ 
Sbjct: 41  KVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE- 99
Query: 140 LAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197
               LF +  Q  K + +   R    I  A+EYC  + + ++ DL    ++ D+ +N ++
Sbjct: 100 ----LFDYIVQRDKMSEQEARRFFQQIISAVEYC-HRHKIVHRDLKPENLLLDEHLNVKI 154
Query: 198 SCFGLMKNSRDGRSYSTNLA---FTPPEYLRTGRV--TPESVMYSFGTLLLDLL 246
           + FGL     DG    T+     +  PE + +G++   PE  ++S G +L  +L
Sbjct: 155 ADFGLSNIMTDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 207

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 84/197 (42%), Gaps = 27/197 (13%)
Query: 75  KGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
           K K     ++AVK     A      D    +E  + +G+ +N  + NLLG C +     +
Sbjct: 54  KDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN--IINLLGACTQDGPLYV 111
Query: 131 VAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTSKER 176
           + EY     L ++L               H   + +     +  A  +A  +EY  SK +
Sbjct: 112 IVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-K 170
Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--DGRSYSTN----LAFTPPEYLRTGRVT 230
            ++ DL A  ++  +D   +++ FGL ++    D    +TN    + +  PE L     T
Sbjct: 171 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 231 PESVMYSFGTLLLDLLS 247
            +S ++SFG LL ++ +
Sbjct: 231 HQSDVWSFGVLLWEIFT 247

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 83/192 (43%), Gaps = 21/192 (10%)
Query: 76  GKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE 133
           GK +   ++AVK    +A  D ++  + E + +  L ++  + NLLG C  G   L++ E
Sbjct: 71  GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 134 YMPNDTLAKHLFH----WETQP----MKWAMRLRVALH----IAEALEYCTSKERALYHD 181
           Y     L   L       ET P           R  LH    +A+ + +  SK   ++ D
Sbjct: 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN-CIHRD 189
Query: 182 LNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVM 235
           + A  ++  +    ++  FGL ++  +  +Y         + +  PE +     T +S +
Sbjct: 190 VAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDV 249
Query: 236 YSFGTLLLDLLS 247
           +S+G LL ++ S
Sbjct: 250 WSYGILLWEIFS 261

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 83  RIAVKRFNRS--AWPDARQFLE-EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139
           ++A+K  N+   A  D +  +E E   +  LR+  +  L       DE ++V EY  N+ 
Sbjct: 40  KVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE- 98
Query: 140 LAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197
               LF +  Q  K + +   R    I  A+EYC  + + ++ DL    ++ D+ +N ++
Sbjct: 99  ----LFDYIVQRDKMSEQEARRFFQQIISAVEYC-HRHKIVHRDLKPENLLLDEHLNVKI 153
Query: 198 SCFGLMKNSRDGRSYSTNLA---FTPPEYLRTGRV--TPESVMYSFGTLLLDLL 246
           + FGL     DG    T+     +  PE + +G++   PE  ++S G +L  +L
Sbjct: 154 ADFGLSNIMTDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 206

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 83  RIAVKRFNRS--AWPDARQFLE-EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139
           ++A+K  N+   A  D +  +E E   +  LR+  +  L       DE ++V EY  N+ 
Sbjct: 31  KVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE- 89
Query: 140 LAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197
               LF +  Q  K + +   R    I  A+EYC  + + ++ DL    ++ D+ +N ++
Sbjct: 90  ----LFDYIVQRDKMSEQEARRFFQQIISAVEYC-HRHKIVHRDLKPENLLLDEHLNVKI 144
Query: 198 SCFGLMKNSRDGRSYSTNLA---FTPPEYLRTGRV--TPESVMYSFGTLLLDLL 246
           + FGL     DG    T+     +  PE + +G++   PE  ++S G +L  +L
Sbjct: 145 ADFGLSNIMTDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 197

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 83  RIAVKRFNRS--AWPDARQFLE-EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139
           ++A+K  N+   A  D +  +E E   +  LR+  +  L       DE ++V EY  N+ 
Sbjct: 35  KVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE- 93
Query: 140 LAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197
               LF +  Q  K + +   R    I  A+EYC  + + ++ DL    ++ D+ +N ++
Sbjct: 94  ----LFDYIVQRDKMSEQEARRFFQQIISAVEYC-HRHKIVHRDLKPENLLLDEHLNVKI 148
Query: 198 SCFGLMKNSRDGRSYSTNLA---FTPPEYLRTGRV--TPESVMYSFGTLLLDLL 246
           + FGL     DG    T+     +  PE + +G++   PE  ++S G +L  +L
Sbjct: 149 ADFGLSNIMTDGNFLKTSCGSPNYAAPEVI-SGKLYAGPEVDVWSCGVILYVML 201

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 66  GEKAPNVVYKGKL-ENQFRIAVKRF-------NRSAWPDARQFLEEARAVGQLRNRRLAN 117
           G+    +V+KG+L +++  +A+K                 ++F  E   +  L +  +  
Sbjct: 28  GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK 87
Query: 118 LLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA 177
           L G     +   +V E++P   L   L   +  P+KW+++LR+ L IA  +EY  ++   
Sbjct: 88  LYGLMH--NPPRMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 178 LYH-DLNAYRIVFD--DDVNP---RLSCFGLMKNSRDGRS-YSTNLAFTPPEYL--RTGR 228
           + H DL +  I     D+  P   +++ FGL + S    S    N  +  PE +      
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 229 VTPESVMYSFGTLLLDLLSGK 249
            T ++  YSF  +L  +L+G+
Sbjct: 205 YTEKADTYSFAMILYTILTGE 225

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 95/216 (43%), Gaps = 28/216 (12%)
Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG       + +  +A+K    +  P A ++ L+EA  +  + N  +  LL
Sbjct: 21  GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 80
Query: 120 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C     + L+ + MP     D + +H  +  +Q +     L   + IAE + Y   + 
Sbjct: 81  GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAEGMNYLEDR- 133
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 229
           R ++ DL A  ++     + +++ FGL K    + + Y       P +++    +     
Sbjct: 134 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 193
Query: 230 TPESVMYSFGTLLLDLLSGKH-----IPPSHVSSFL 260
           T +S ++S+G  + +L++        IP S +SS L
Sbjct: 194 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 229

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  + +L G   +    +++ EYM N +L   L   + +   ++  
Sbjct: 54  RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLV 113
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    I   ++Y  S    ++ DL A  I+ + ++  ++S FG+ +   D    +Y+
Sbjct: 114 GMLR---GIGSGMKYL-SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 169
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           T      + +T PE +   + T  S ++S+G ++ +++S
Sbjct: 170 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R FL EA  +GQ  +  + +L G   +    +++ EYM N +L   L   + +   ++  
Sbjct: 60  RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLV 119
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
             LR    I   ++Y  S    ++ DL A  I+ + ++  ++S FG+ +   D    +Y+
Sbjct: 120 GMLR---GIGSGMKYL-SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 175
Query: 214 TN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           T      + +T PE +   + T  S ++S+G ++ +++S
Sbjct: 176 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 27/199 (13%)
Query: 73  VYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
           + K K +    +AVK     A      D    +E  + +G+ +N  + NLLG C +    
Sbjct: 59  IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPL 116
Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSK 174
            ++ EY     L ++L       M+++  + RV                +A  +EY  S 
Sbjct: 117 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS- 175
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGR 228
           ++ ++ DL A  ++  ++   R++ FGL +  N+ D    +TN    + +  PE L    
Sbjct: 176 QKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 235
Query: 229 VTPESVMYSFGTLLLDLLS 247
            T +S ++SFG L+ ++ +
Sbjct: 236 YTHQSDVWSFGVLMWEIFT 254

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/194 (20%), Positives = 83/194 (42%), Gaps = 23/194 (11%)
Query: 76  GKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE 133
           GK +   ++AVK    +A  D ++  + E + +  L ++  + NLLG C  G   L++ E
Sbjct: 71  GKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITE 130
Query: 134 YMPNDTLAKHLFHWETQPMKWAMR--------------LRVALHIAEALEYCTSKERALY 179
           Y     L   L       ++++                L  +  +A+ + +  SK   ++
Sbjct: 131 YCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASK-NCIH 189
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPES 233
            D+ A  ++  +    ++  FGL ++  +  +Y         + +  PE +     T +S
Sbjct: 190 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS 249
Query: 234 VMYSFGTLLLDLLS 247
            ++S+G LL ++ S
Sbjct: 250 DVWSYGILLWEIFS 263

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 17/162 (10%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R+FL EA  +GQ  +  +  L G        +++ E+M N  L   L   + Q   ++  
Sbjct: 60  REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLV 119
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK----NSRDGRS 211
             LR    IA  + Y  ++   ++ DL A  I+ + ++  ++S FGL +    NS D  +
Sbjct: 120 GMLR---GIASGMRYL-AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP-T 174
Query: 212 YSTNLA------FTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           Y+++L       +T PE +   + T  S  +S+G ++ +++S
Sbjct: 175 YTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 216

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 88/199 (44%), Gaps = 27/199 (13%)
Query: 73  VYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
           + K K +    +AVK     A      D    +E  + +G+ +N  + NLLG C +    
Sbjct: 46  IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPL 103
Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSK 174
            ++ EY     L ++L       M+++  + RV                +A  +EY  S 
Sbjct: 104 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS- 162
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGR 228
           ++ ++ DL A  ++  ++   +++ FGL +  N+ D    +TN    + +  PE L    
Sbjct: 163 QKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 222
Query: 229 VTPESVMYSFGTLLLDLLS 247
            T +S ++SFG L+ ++ +
Sbjct: 223 YTHQSDVWSFGVLMWEIFT 241

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 88/199 (44%), Gaps = 27/199 (13%)
Query: 73  VYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
           + K K +    +AVK     A      D    +E  + +G+ +N  + NLLG C +    
Sbjct: 59  IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPL 116
Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSK 174
            ++ EY     L ++L       M+++  + RV                +A  +EY  S 
Sbjct: 117 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS- 175
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGR 228
           ++ ++ DL A  ++  ++   +++ FGL +  N+ D    +TN    + +  PE L    
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRV 235
Query: 229 VTPESVMYSFGTLLLDLLS 247
            T +S ++SFG L+ ++ +
Sbjct: 236 YTHQSDVWSFGVLMWEIFT 254

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 95/216 (43%), Gaps = 28/216 (12%)
Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG       + +  +A+K    +  P A ++ L+EA  +  + N  +  LL
Sbjct: 24  GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 120 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C     + L+ + MP     D + +H  +  +Q +     L   + IA+ + Y   + 
Sbjct: 84  GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 136
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 229
           R ++ DL A  ++     + +++ FGL K    + + Y       P +++    +     
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 230 TPESVMYSFGTLLLDLLSGKH-----IPPSHVSSFL 260
           T +S ++S+G  + +L++        IP S +SS L
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 88/199 (44%), Gaps = 27/199 (13%)
Query: 73  VYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
           + K K +    +AVK     A      D    +E  + +G+ +N  + NLLG C +    
Sbjct: 48  IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPL 105
Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSK 174
            ++ EY     L ++L       M+++  + RV                +A  +EY  S 
Sbjct: 106 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS- 164
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGR 228
           ++ ++ DL A  ++  ++   +++ FGL +  N+ D    +TN    + +  PE L    
Sbjct: 165 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 224
Query: 229 VTPESVMYSFGTLLLDLLS 247
            T +S ++SFG L+ ++ +
Sbjct: 225 YTHQSDVWSFGVLMWEIFT 243

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 95/216 (43%), Gaps = 28/216 (12%)
Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG       + +  +A+K    +  P A ++ L+EA  +  + N  +  LL
Sbjct: 30  GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 89
Query: 120 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C     + L+ + MP     D + +H  +  +Q +     L   + IA+ + Y   + 
Sbjct: 90  GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 142
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 229
           R ++ DL A  ++     + +++ FGL K    + + Y       P +++    +     
Sbjct: 143 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 202
Query: 230 TPESVMYSFGTLLLDLLSGKH-----IPPSHVSSFL 260
           T +S ++S+G  + +L++        IP S +SS L
Sbjct: 203 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 238

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 95/216 (43%), Gaps = 28/216 (12%)
Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG       + +  +A+K    +  P A ++ L+EA  +  + N  +  LL
Sbjct: 26  GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 120 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C     + L+ + MP     D + +H  +  +Q +     L   + IA+ + Y   + 
Sbjct: 86  GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 138
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 229
           R ++ DL A  ++     + +++ FGL K    + + Y       P +++    +     
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 230 TPESVMYSFGTLLLDLLSGKH-----IPPSHVSSFL 260
           T +S ++S+G  + +L++        IP S +SS L
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 234

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 88/199 (44%), Gaps = 27/199 (13%)
Query: 73  VYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
           + K K +    +AVK     A      D    +E  + +G+ +N  + NLLG C +    
Sbjct: 51  IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPL 108
Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSK 174
            ++ EY     L ++L       M+++  + RV                +A  +EY  S 
Sbjct: 109 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS- 167
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGR 228
           ++ ++ DL A  ++  ++   +++ FGL +  N+ D    +TN    + +  PE L    
Sbjct: 168 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 227
Query: 229 VTPESVMYSFGTLLLDLLS 247
            T +S ++SFG L+ ++ +
Sbjct: 228 YTHQSDVWSFGVLMWEIFT 246

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 95/216 (43%), Gaps = 28/216 (12%)
Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG       + +  +A+K    +  P A ++ L+EA  +  + N  +  LL
Sbjct: 27  GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 120 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C     + L+ + MP     D + +H  +  +Q +     L   + IA+ + Y   + 
Sbjct: 87  GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 139
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 229
           R ++ DL A  ++     + +++ FGL K    + + Y       P +++    +     
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 230 TPESVMYSFGTLLLDLLSGKH-----IPPSHVSSFL 260
           T +S ++S+G  + +L++        IP S +SS L
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 235

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/191 (21%), Positives = 86/191 (45%), Gaps = 12/191 (6%)
Query: 83  RIAVKRFN-RSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLLVAEYMPNDT 139
           ++AVK     S         +E   +  L +  +    G C E  G+   L+ E++P+ +
Sbjct: 52  QVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGS 111
Query: 140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSC 199
           L ++L   + + +    +L+ A+ I + ++Y  S++  ++ DL A  ++ + +   ++  
Sbjct: 112 LKEYLPKNKNK-INLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGD 169
Query: 200 FGLMKNSRDGRSYST-------NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
           FGL K     +   T        + +  PE L   +    S ++SFG  L +LL+     
Sbjct: 170 FGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSD 229
Query: 253 PSHVSSFLWLV 263
            S ++ FL ++
Sbjct: 230 SSPMALFLKMI 240

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 95/216 (43%), Gaps = 28/216 (12%)
Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG       + +  +A+K    +  P A ++ L+EA  +  + N  +  LL
Sbjct: 31  GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 90
Query: 120 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C     + L+ + MP     D + +H  +  +Q +     L   + IA+ + Y   + 
Sbjct: 91  GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 143
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 229
           R ++ DL A  ++     + +++ FGL K    + + Y       P +++    +     
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 230 TPESVMYSFGTLLLDLLSGKH-----IPPSHVSSFL 260
           T +S ++S+G  + +L++        IP S +SS L
Sbjct: 204 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 239

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 95/216 (43%), Gaps = 28/216 (12%)
Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG       + +  +A+K    +  P A ++ L+EA  +  + N  +  LL
Sbjct: 27  GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 120 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C     + L+ + MP     D + +H  +  +Q +     L   + IA+ + Y   + 
Sbjct: 87  GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 139
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 229
           R ++ DL A  ++     + +++ FGL K    + + Y       P +++    +     
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 230 TPESVMYSFGTLLLDLLSGKH-----IPPSHVSSFL 260
           T +S ++S+G  + +L++        IP S +SS L
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 235

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 83/208 (39%), Gaps = 22/208 (10%)
Query: 66  GEKAPNVVYKGKLENQ------FRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANL 118
           G  A   VY+G++          ++AVK      +  D   FL EA  + +L ++ +   
Sbjct: 54  GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRC 113
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 173
           +G   +   R ++ E M    L   L       +QP   AM   L VA  IA   +Y   
Sbjct: 114 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 172
Query: 174 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 224
           +   ++ D+ A   +       R++  G    +RD         G      + + PPE  
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 232
Query: 225 RTGRVTPESVMYSFGTLLLDLLSGKHIP 252
             G  T ++  +SFG LL ++ S  ++P
Sbjct: 233 MEGIFTSKTDTWSFGVLLWEIFSLGYMP 260

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 95/216 (43%), Gaps = 28/216 (12%)
Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG       + +  +A+K    +  P A ++ L+EA  +  + N  +  LL
Sbjct: 24  GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 120 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C     + L+ + MP     D + +H  +  +Q +     L   + IA+ + Y   + 
Sbjct: 84  GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 136
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 229
           R ++ DL A  ++     + +++ FGL K    + + Y       P +++    +     
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 230 TPESVMYSFGTLLLDLLSGKH-----IPPSHVSSFL 260
           T +S ++S+G  + +L++        IP S +SS L
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/212 (22%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG       + +  +A+K    +  P A ++ L+EA  +  + N  +  LL
Sbjct: 24  GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
           G C     + L+ + MP   L  ++   +   +     L   + IA+ + Y   + R ++
Sbjct: 84  GICLTSTVQ-LITQLMPFGXLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 140
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV-----TPES 233
            DL A  ++     + +++ FGL K    + + Y       P +++    +     T +S
Sbjct: 141 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 200
Query: 234 VMYSFGTLLLDLLSGKH-----IPPSHVSSFL 260
            ++S+G  + +L++        IP S +SS L
Sbjct: 201 DVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 95/216 (43%), Gaps = 28/216 (12%)
Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG       + +  +A+K    +  P A ++ L+EA  +  + N  +  LL
Sbjct: 18  GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 77
Query: 120 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C     + L+ + MP     D + +H  +  +Q +     L   + IA+ + Y   + 
Sbjct: 78  GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 130
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 229
           R ++ DL A  ++     + +++ FGL K    + + Y       P +++    +     
Sbjct: 131 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 190
Query: 230 TPESVMYSFGTLLLDLLSGKH-----IPPSHVSSFL 260
           T +S ++S+G  + +L++        IP S +SS L
Sbjct: 191 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 226

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 95/216 (43%), Gaps = 28/216 (12%)
Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG       + +  +A+K    +  P A ++ L+EA  +  + N  +  LL
Sbjct: 27  GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 120 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C     + L+ + MP     D + +H  +  +Q +     L   + IA+ + Y   + 
Sbjct: 87  GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 139
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 229
           R ++ DL A  ++     + +++ FGL K    + + Y       P +++    +     
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 230 TPESVMYSFGTLLLDLLSG-----KHIPPSHVSSFL 260
           T +S ++S+G  + +L++        IP S +SS L
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 235

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 95/216 (43%), Gaps = 28/216 (12%)
Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG       + +  +A+K    +  P A ++ L+EA  +  + N  +  LL
Sbjct: 49  GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 108
Query: 120 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C     + L+ + MP     D + +H  +  +Q +     L   + IA+ + Y   + 
Sbjct: 109 GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 161
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 229
           R ++ DL A  ++     + +++ FGL K    + + Y       P +++    +     
Sbjct: 162 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 221
Query: 230 TPESVMYSFGTLLLDLLSG-----KHIPPSHVSSFL 260
           T +S ++S+G  + +L++        IP S +SS L
Sbjct: 222 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 257

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/191 (21%), Positives = 86/191 (45%), Gaps = 12/191 (6%)
Query: 83  RIAVKRFN-RSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLLVAEYMPNDT 139
           ++AVK     S         +E   +  L +  +    G C E  G+   L+ E++P+ +
Sbjct: 40  QVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGS 99
Query: 140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSC 199
           L ++L   + + +    +L+ A+ I + ++Y  S++  ++ DL A  ++ + +   ++  
Sbjct: 100 LKEYLPKNKNK-INLKQQLKYAVQICKGMDYLGSRQ-YVHRDLAARNVLVESEHQVKIGD 157
Query: 200 FGLMKNSRDGRSYST-------NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
           FGL K     +   T        + +  PE L   +    S ++SFG  L +LL+     
Sbjct: 158 FGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSD 217
Query: 253 PSHVSSFLWLV 263
            S ++ FL ++
Sbjct: 218 SSPMALFLKMI 228

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 96/216 (44%), Gaps = 28/216 (12%)
Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG       + +  +A+K    +  P A ++ L+EA  +  + N  +  LL
Sbjct: 27  GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 86
Query: 120 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C     +L++ + MP     D + +H  +  +Q +     L   + IA+ + Y   + 
Sbjct: 87  GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 139
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 229
           R ++ DL A  ++     + +++ FGL K    + + Y       P +++    +     
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 230 TPESVMYSFGTLLLDLLSGKH-----IPPSHVSSFL 260
           T +S ++S+G  + +L++        IP S +SS L
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 235

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 88/199 (44%), Gaps = 27/199 (13%)
Query: 73  VYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
           + K K +    +AVK     A      D    +E  + +G+ +N  + NLLG C +    
Sbjct: 59  IDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPL 116
Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSK 174
            ++ EY     L ++L       M+++  + RV                +A  +EY  S 
Sbjct: 117 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS- 175
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGR 228
           ++ ++ DL A  ++  ++   +++ FGL +  N+ D    +TN    + +  PE L    
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 235
Query: 229 VTPESVMYSFGTLLLDLLS 247
            T +S ++SFG L+ ++ +
Sbjct: 236 YTHQSDVWSFGVLMWEIFT 254

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 96/216 (44%), Gaps = 28/216 (12%)
Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG       + +  +A+K    +  P A ++ L+EA  +  + N  +  LL
Sbjct: 28  GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 87
Query: 120 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C     +L++ + MP     D + +H  +  +Q +     L   + IA+ + Y   + 
Sbjct: 88  GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 140
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 229
           R ++ DL A  ++     + +++ FGL K    + + Y       P +++    +     
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 200
Query: 230 TPESVMYSFGTLLLDLLSGKH-----IPPSHVSSFL 260
           T +S ++S+G  + +L++        IP S +SS L
Sbjct: 201 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 236

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 96/216 (44%), Gaps = 28/216 (12%)
Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG       + +  +A+K    +  P A ++ L+EA  +  + N  +  LL
Sbjct: 25  GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 84
Query: 120 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C     +L++ + MP     D + +H  +  +Q +     L   + IA+ + Y   + 
Sbjct: 85  GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 137
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 229
           R ++ DL A  ++     + +++ FGL K    + + Y       P +++    +     
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 197
Query: 230 TPESVMYSFGTLLLDLLSGKH-----IPPSHVSSFL 260
           T +S ++S+G  + +L++        IP S +SS L
Sbjct: 198 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 233

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 96/216 (44%), Gaps = 28/216 (12%)
Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG       + +  +A+K    +  P A ++ L+EA  +  + N  +  LL
Sbjct: 26  GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 85
Query: 120 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C     +L++ + MP     D + +H  +  +Q +     L   + IA+ + Y   + 
Sbjct: 86  GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 138
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 229
           R ++ DL A  ++     + +++ FGL K    + + Y       P +++    +     
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 230 TPESVMYSFGTLLLDLLSGKH-----IPPSHVSSFL 260
           T +S ++S+G  + +L++        IP S +SS L
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 234

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 96/216 (44%), Gaps = 28/216 (12%)
Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG       + +  +A+K    +  P A ++ L+EA  +  + N  +  LL
Sbjct: 24  GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 83
Query: 120 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C     +L++ + MP     D + +H  +  +Q +     L   + IA+ + Y   + 
Sbjct: 84  GICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 136
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 229
           R ++ DL A  ++     + +++ FGL K    + + Y       P +++    +     
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 230 TPESVMYSFGTLLLDLLSGKH-----IPPSHVSSFL 260
           T +S ++S+G  + +L++        IP S +SS L
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 88/199 (44%), Gaps = 27/199 (13%)
Query: 73  VYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
           + K K +    +AVK     A      D    +E  + +G+ +N  + NLLG C +    
Sbjct: 105 IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPL 162
Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSK 174
            ++ EY     L ++L       M+++  + RV                +A  +EY  S 
Sbjct: 163 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS- 221
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGR 228
           ++ ++ DL A  ++  ++   +++ FGL +  N+ D    +TN    + +  PE L    
Sbjct: 222 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 281
Query: 229 VTPESVMYSFGTLLLDLLS 247
            T +S ++SFG L+ ++ +
Sbjct: 282 YTHQSDVWSFGVLMWEIFT 300

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/212 (22%), Positives = 93/212 (43%), Gaps = 20/212 (9%)
Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG       + +  +A+K    +  P A ++ L+EA  +  + N  +  LL
Sbjct: 25  GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 84
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
           G C     +L++ + MP   L  ++   +   +     L   + IA+ + Y   + R ++
Sbjct: 85  GICLTSTVQLIM-QLMPFGXLLDYVREHKDN-IGSQYLLNWCVQIAKGMNYLEDR-RLVH 141
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV-----TPES 233
            DL A  ++     + +++ FGL K    + + Y       P +++    +     T +S
Sbjct: 142 RDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 201
Query: 234 VMYSFGTLLLDLLSGKH-----IPPSHVSSFL 260
            ++S+G  + +L++        IP S +SS L
Sbjct: 202 DVWSYGVTVWELMTFGSKPYDGIPASEISSIL 233

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/199 (22%), Positives = 88/199 (44%), Gaps = 27/199 (13%)
Query: 73  VYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
           + K K +    +AVK     A      D    +E  + +G+ +N  + NLLG C +    
Sbjct: 59  IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPL 116
Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRL-RV-------------ALHIAEALEYCTSK 174
            ++ EY     L ++L       M+++  + RV                +A  +EY  S 
Sbjct: 117 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS- 175
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGR 228
           ++ ++ DL A  ++  ++   +++ FGL +  N+ D    +TN    + +  PE L    
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRV 235
Query: 229 VTPESVMYSFGTLLLDLLS 247
            T +S ++SFG L+ ++ +
Sbjct: 236 YTHQSDVWSFGVLMWEIFT 254

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 95/216 (43%), Gaps = 28/216 (12%)
Query: 66  GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 119
           G  A   VYKG       + +  +A+K    +  P A ++ L+EA  +  + N  +  LL
Sbjct: 34  GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 93
Query: 120 GCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
           G C     + L+ + MP     D + +H  +  +Q +     L   + IA+ + Y   + 
Sbjct: 94  GICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR- 146
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRV----- 229
           R ++ DL A  ++     + +++ FGL K    + + Y       P +++    +     
Sbjct: 147 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 206
Query: 230 TPESVMYSFGTLLLDLLSGKH-----IPPSHVSSFL 260
           T +S ++S+G  + +L++        IP S +SS L
Sbjct: 207 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 242

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 15/161 (9%)
Query: 98  RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWA 155
           R+FL EA  +GQ  +  +  L G        +++ E+M N  L   L   + Q   ++  
Sbjct: 62  REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLV 121
Query: 156 MRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK----NSRDGRS 211
             LR    IA  + Y  ++   ++ DL A  I+ + ++  ++S FGL +    NS D   
Sbjct: 122 GMLR---GIASGMRYL-AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTE 177
Query: 212 YST-----NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
            S+      + +T PE +   + T  S  +S+G ++ +++S
Sbjct: 178 TSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMS 218

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 20/201 (9%)
Query: 66  GEKAPNVVYKGKL-ENQFRIAVKRF-------NRSAWPDARQFLEEARAVGQLRNRRLAN 117
           G+    +V+KG+L +++  +A+K                 ++F  E   +  L +  +  
Sbjct: 28  GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK 87
Query: 118 LLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA 177
           L G     +   +V E++P   L   L   +  P+KW+++LR+ L IA  +EY  ++   
Sbjct: 88  LYGLMH--NPPRMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 178 LYH-DLNAYRIVFD--DDVNP---RLSCFGLMKNSRDGRS-YSTNLAFTPPEYL--RTGR 228
           + H DL +  I     D+  P   +++ FG  + S    S    N  +  PE +      
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 229 VTPESVMYSFGTLLLDLLSGK 249
            T ++  YSF  +L  +L+G+
Sbjct: 205 YTEKADTYSFAMILYTILTGE 225

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/199 (22%), Positives = 86/199 (43%), Gaps = 27/199 (13%)
Query: 73  VYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
           + K K +    +AVK     A      D    +E  + +G+ +N  + NLLG C +    
Sbjct: 59  IDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN--IINLLGACTQDGPL 116
Query: 129 LLVAEYMPNDTLAKHL-----------FHWETQP---MKWAMRLRVALHIAEALEYCTSK 174
            ++ EY     L ++L           +     P   M +   +     +A  +EY  S 
Sbjct: 117 YVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS- 175
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTN----LAFTPPEYLRTGR 228
           ++ ++ DL A  ++  ++   +++ FGL +  N+ D    +TN    + +  PE L    
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRV 235
Query: 229 VTPESVMYSFGTLLLDLLS 247
            T +S ++SFG L+ ++ +
Sbjct: 236 YTHQSDVWSFGVLMWEIFT 254

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 83/208 (39%), Gaps = 22/208 (10%)
Query: 66  GEKAPNVVYKGKLENQ------FRIAVKRFNRS-AWPDARQFLEEARAVGQLRNRRLANL 118
           G  A   VY+G++          ++AVK      +  D   FL EA  + +L ++ +   
Sbjct: 40  GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRC 99
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 173
           +G   +   R ++ E M    L   L       +QP   AM   L VA  IA   +Y   
Sbjct: 100 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 158
Query: 174 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 224
           +   ++ D+ A   +       R++  G    +RD         G      + + PPE  
Sbjct: 159 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 218
Query: 225 RTGRVTPESVMYSFGTLLLDLLSGKHIP 252
             G  T ++  +SFG LL ++ S  ++P
Sbjct: 219 MEGIFTSKTDTWSFGVLLWEIFSLGYMP 246

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 11/172 (6%)
Query: 84  IAVKRFNRSAW-PDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 141
           +A+K  +++   P + Q    E R +  L +  +  L           L+ EY     + 
Sbjct: 40  VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVF 99
Query: 142 KHLF-HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200
            +L  H   +  +   + R    I  A++YC  K R ++ DL A  ++ D D+N +++ F
Sbjct: 100 DYLVAHGRMKEKEARSKFR---QIVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIADF 155
Query: 201 GLMKNSRDGRSYSTNLAFTP---PEYLRTGRVT-PESVMYSFGTLLLDLLSG 248
           G       G    T     P   PE  +  +   PE  ++S G +L  L+SG
Sbjct: 156 GFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 207

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 20/201 (9%)
Query: 66  GEKAPNVVYKGKL-ENQFRIAVKRF-------NRSAWPDARQFLEEARAVGQLRNRRLAN 117
           G+    +V+KG+L +++  +A+K                 ++F  E   +  L +  +  
Sbjct: 28  GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVK 87
Query: 118 LLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA 177
           L G     +   +V E++P   L   L   +  P+KW+++LR+ L IA  +EY  ++   
Sbjct: 88  LYGLMH--NPPRMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQNPP 144
Query: 178 LYH-DLNAYRIVFD--DDVNP---RLSCFGLMKNSRDGRS-YSTNLAFTPPEYL--RTGR 228
           + H DL +  I     D+  P   +++ F L + S    S    N  +  PE +      
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 229 VTPESVMYSFGTLLLDLLSGK 249
            T ++  YSF  +L  +L+G+
Sbjct: 205 YTEKADTYSFAMILYTILTGE 225

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 82/208 (39%), Gaps = 22/208 (10%)
Query: 66  GEKAPNVVYKGKLENQ------FRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANL 118
           G  A   VY+G++          ++AVK      +  D   FL EA  + +  ++ +   
Sbjct: 54  GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 113
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 173
           +G   +   R ++ E M    L   L       +QP   AM   L VA  IA   +Y   
Sbjct: 114 IGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 172
Query: 174 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 224
           +   ++ D+ A   +       R++  G    +RD         G      + + PPE  
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 232
Query: 225 RTGRVTPESVMYSFGTLLLDLLSGKHIP 252
             G  T ++  +SFG LL ++ S  ++P
Sbjct: 233 MEGIFTSKTDTWSFGVLLWEIFSLGYMP 260

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 49/231 (21%), Positives = 98/231 (42%), Gaps = 34/231 (14%)
Query: 46  IETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA-RQFLEEA 104
           I+ L +   G   + +    GEK            +  +A+K    +  P A ++ L+EA
Sbjct: 20  IKVLSSGAFGTVYKGLWIPEGEKV-----------KIPVAIKELREATSPKANKEILDEA 68
Query: 105 RAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRV 160
             +  + N  +  LLG C     + L+ + MP     D + +H  +  +Q +     L  
Sbjct: 69  YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW 122
Query: 161 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFT 219
            + IA+ + Y   + R ++ DL A  ++     + +++ FGL K    + + Y       
Sbjct: 123 CVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 181
Query: 220 PPEYLRTGRV-----TPESVMYSFGTLLLDLLSGKH-----IPPSHVSSFL 260
           P +++    +     T +S ++S+G  + +L++        IP S +SS L
Sbjct: 182 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 232

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 82/208 (39%), Gaps = 22/208 (10%)
Query: 66  GEKAPNVVYKGKLENQ------FRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANL 118
           G  A   VY+G++          ++AVK      +  D   FL EA  + +  ++ +   
Sbjct: 39  GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 98
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 173
           +G   +   R ++ E M    L   L       +QP   AM   L VA  IA   +Y   
Sbjct: 99  IGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 157
Query: 174 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 224
           +   ++ D+ A   +       R++  G    +RD         G      + + PPE  
Sbjct: 158 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 217
Query: 225 RTGRVTPESVMYSFGTLLLDLLSGKHIP 252
             G  T ++  +SFG LL ++ S  ++P
Sbjct: 218 MEGIFTSKTDTWSFGVLLWEIFSLGYMP 245

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 84/214 (39%), Gaps = 22/214 (10%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQ------FRIAVKRFNR-SAWPDARQFLEEARAVGQLRN 112
            ++   G  A   VY+G++          ++AVK      +  D   FL EA  + +  +
Sbjct: 25  TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 84
Query: 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEA 167
           + +   +G   +   R ++ E M    L   L       +QP   AM   L VA  IA  
Sbjct: 85  QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 144
Query: 168 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAF 218
            +Y   +   ++ D+ A   +       R++  G    +RD         G      + +
Sbjct: 145 CQY-LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW 203
Query: 219 TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
            PPE    G  T ++  +SFG LL ++ S  ++P
Sbjct: 204 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 237

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 49/231 (21%), Positives = 98/231 (42%), Gaps = 34/231 (14%)
Query: 46  IETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA-RQFLEEA 104
           I+ L +   G   + +    GEK            +  +A+K    +  P A ++ L+EA
Sbjct: 27  IKVLSSGAFGTVYKGLWIPEGEKV-----------KIPVAIKELREATSPKANKEILDEA 75
Query: 105 RAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRV 160
             +  + N  +  LLG C     + L+ + MP     D + +H  +  +Q +     L  
Sbjct: 76  YVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL-----LNW 129
Query: 161 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFT 219
            + IA+ + Y   + R ++ DL A  ++     + +++ FGL K    + + Y       
Sbjct: 130 CVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 220 PPEYLRTGRV-----TPESVMYSFGTLLLDLLSGKH-----IPPSHVSSFL 260
           P +++    +     T +S ++S+G  + +L++        IP S +SS L
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 239

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 20/185 (10%)
Query: 83  RIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139
           ++AVK  NR    +     +   E + +   R+  +  L        +  +V EY+    
Sbjct: 38  KVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGE 97
Query: 140 LAKHL-FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLS 198
           L  ++  H   + M+     R+   I  A++YC  +   ++ DL    ++ D  +N +++
Sbjct: 98  LFDYICKHGRVEEMEAR---RLFQQILSAVDYC-HRHMVVHRDLKPENVLLDAHMNAKIA 153
Query: 199 CFGLMKNSRDGRSYSTNLA---FTPPEYLRTGRV--TPESVMYSFGTLLLDLLSG----- 248
            FGL     DG    T+     +  PE + +GR+   PE  ++S G +L  LL G     
Sbjct: 154 DFGLSNMMSDGEFLRTSCGSPNYAAPEVI-SGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
Query: 249 -KHIP 252
            +H+P
Sbjct: 213 DEHVP 217

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 82/208 (39%), Gaps = 22/208 (10%)
Query: 66  GEKAPNVVYKGKLENQ------FRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANL 118
           G  A   VY+G++          ++AVK      +  D   FL EA  + +  ++ +   
Sbjct: 39  GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRC 98
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEALEYCTS 173
           +G   +   R ++ E M    L   L       +QP   AM   L VA  IA   +Y   
Sbjct: 99  IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY-LE 157
Query: 174 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAFTPPEYL 224
           +   ++ D+ A   +       R++  G    +RD         G      + + PPE  
Sbjct: 158 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAF 217
Query: 225 RTGRVTPESVMYSFGTLLLDLLSGKHIP 252
             G  T ++  +SFG LL ++ S  ++P
Sbjct: 218 MEGIFTSKTDTWSFGVLLWEIFSLGYMP 245

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 49/231 (21%), Positives = 99/231 (42%), Gaps = 34/231 (14%)
Query: 46  IETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA-RQFLEEA 104
           I+ L +   G   + +    GEK            +  +A+K    +  P A ++ L+EA
Sbjct: 27  IKVLSSGAFGTVYKGLWIPEGEKV-----------KIPVAIKELREATSPKANKEILDEA 75
Query: 105 RAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRV 160
             +  + N  +  LLG C     +L++ + MP     D + +H  +  +Q +     L  
Sbjct: 76  YVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNW 129
Query: 161 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFT 219
            + IA+ + Y   + R ++ DL A  ++     + +++ FGL K    + + Y       
Sbjct: 130 CVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKV 188
Query: 220 PPEYLRTGRV-----TPESVMYSFGTLLLDLLSGKH-----IPPSHVSSFL 260
           P +++    +     T +S ++S+G  + +L++        IP S +SS L
Sbjct: 189 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 239

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 11/172 (6%)
Query: 84  IAVKRFNRSAW-PDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 141
           +AVK  +++   P + Q    E R +  L +  +  L           LV EY     + 
Sbjct: 43  VAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVF 102
Query: 142 KHLF-HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200
            +L  H   +  +   + R    I  A++YC  K   ++ DL A  ++ D D+N +++ F
Sbjct: 103 DYLVAHGRMKEKEARAKFR---QIVSAVQYCHQK-YIVHRDLKAENLLLDGDMNIKIADF 158
Query: 201 GLMKNSRDGRSYSTNLAFTP---PEYLRTGRVT-PESVMYSFGTLLLDLLSG 248
           G       G    T     P   PE  +  +   PE  ++S G +L  L+SG
Sbjct: 159 GFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 84/214 (39%), Gaps = 22/214 (10%)
Query: 60  NIVSEHGEKAPNVVYKGKLENQ------FRIAVKRFNR-SAWPDARQFLEEARAVGQLRN 112
            ++   G  A   VY+G++          ++AVK      +  D   FL EA  + +  +
Sbjct: 51  TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 110
Query: 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMR--LRVALHIAEA 167
           + +   +G   +   R ++ E M    L   L       +QP   AM   L VA  IA  
Sbjct: 111 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 170
Query: 168 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---------GRSYSTNLAF 218
            +Y   +   ++ D+ A   +       R++  G    +RD         G      + +
Sbjct: 171 CQY-LEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKW 229
Query: 219 TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
            PPE    G  T ++  +SFG LL ++ S  ++P
Sbjct: 230 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 263

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	264
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	4e-50
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-49
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	9e-48
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-21
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-21
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-18
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	4e-18
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-17
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	5e-17
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	6e-17
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	7e-17
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-16
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-16
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-16
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-16
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	3e-16
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	4e-16
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	4e-16
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	5e-16
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	7e-16
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	1e-15
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-15
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-15
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	4e-15
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-14
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-13
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	6e-13
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	8e-13
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-12
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-12
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-12
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	5e-12
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	6e-12
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-11
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	1e-11
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	1e-11
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-11
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-11
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-11
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-11
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	3e-11
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	4e-11
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	5e-11
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	7e-11
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	7e-11
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	7e-11
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	1e-10
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-10
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	1e-10
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-10
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	3e-10
4aoj_A	329	High affinity nerve growth factor receptor; transf	3e-10
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	5e-10
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	5e-10
3q4u_A	301	Activin receptor type-1; structural genomics conso	5e-10
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	9e-10
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	1e-09
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	1e-09
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-09
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	5e-09
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-08
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-08
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-08
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-08
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	3e-08
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	3e-08
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	6e-08
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-07
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	8e-07
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	8e-07
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-06
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	3e-06
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	5e-06
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	5e-06
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	7e-06
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-05
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-04
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	3e-04
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	8e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  166 bits (423), Expect = 4e-50
 Identities = 71/236 (30%), Positives = 111/236 (47%), Gaps = 18/236 (7%)

Query: 26  DVENEEKPGVD--NVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFR 83
           DV  EE P V    +  F   S+  L+ A+  F+ +NI+   G      VYKG+L +   
Sbjct: 3   DVPAEEDPEVHLGQLKRF---SLRELQVASDNFSNKNIL---GRGGFGKVYKGRLADGTL 56

Query: 84  IAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142
           +AVKR           QF  E   +    +R L  L G C    ERLLV  YM N ++A 
Sbjct: 57  VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 116

Query: 143 HLF--HWETQPMKWAMRLRVALHIAEALEY--CTSKERALYHDLNAYRIVFDDDVNPRLS 198
            L        P+ W  R R+AL  A  L Y       + ++ D+ A  I+ D++    + 
Sbjct: 117 CLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176

Query: 199 CFGLMKNSRDGRSY-STNLAFT----PPEYLRTGRVTPESVMYSFGTLLLDLLSGK 249
            FGL K      ++ +T +  T     PEYL TG+ + ++ ++ +G +LL+L++G+
Sbjct: 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQ 232

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  164 bits (418), Expect = 1e-49
 Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 33/243 (13%)

Query: 28  ENEEKPGVD-NVPVFCEYSIETLRTATSGFAMENIVSEH---GEKAPNVVYKGKLENQFR 83
           EN+     D     F   S   L+  T+ F    I       GE    VVYKG + N   
Sbjct: 1   ENKSLEVSDTRFHSF---SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-T 56

Query: 84  IAVKRFNRSAWPDA----RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139
           +AVK+             +QF +E + + + ++  L  LLG   +GD+  LV  YMPN +
Sbjct: 57  VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGS 116

Query: 140 LAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR------IVFDDD 192
           L   L   + T P+ W MR ++A   A  + +       L+ + + +R      I+ D+ 
Sbjct: 117 LLDRLSCLDGTPPLSWHMRCKIAQGAANGINF-------LHENHHIHRDIKSANILLDEA 169

Query: 193 VNPRLSCFGLMK-NSRDGRSY-STNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLL 246
              ++S FGL + + +  ++  ++ +  T     PE L  G +TP+S +YSFG +LL+++
Sbjct: 170 FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEII 228

Query: 247 SGK 249
           +G 
Sbjct: 229 TGL 231

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  160 bits (406), Expect = 9e-48
 Identities = 68/245 (27%), Positives = 116/245 (47%), Gaps = 17/245 (6%)

Query: 14  GSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVV 73
           GS+Y +A     D  +                +  L  AT+ F  + ++   G      V
Sbjct: 2   GSKYSKATNSINDALSSSYLVPFESYRV---PLVDLEEATNNFDHKFLI---GHGVFGKV 55

Query: 74  YKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133
           YKG L +  ++A+KR    +     +F  E   +   R+  L +L+G C E +E +L+ +
Sbjct: 56  YKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYK 115

Query: 134 YMPNDTLAKHLF--HWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
           YM N  L +HL+     T  M W  RL + +  A  L Y     RA+ H D+ +  I+ D
Sbjct: 116 YMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL--HTRAIIHRDVKSINILLD 173

Query: 191 DDVNPRLSCFGLMK-NSRDGRSY-STNLAFTP----PEYLRTGRVTPESVMYSFGTLLLD 244
           ++  P+++ FG+ K  +   +++ ST +  T     PEY   GR+T +S +YSFG +L +
Sbjct: 174 ENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFE 233

Query: 245 LLSGK 249
           +L  +
Sbjct: 234 VLCAR 238

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 90.0 bits (224), Expect = 1e-21
 Identities = 39/191 (20%), Positives = 74/191 (38%), Gaps = 20/191 (10%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
            ++KG+ +    I VK      W     R F EE   +    +  +  +LG C       
Sbjct: 25  ELWKGRWQGN-DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83

Query: 130 L--VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYR 186
              +  +MP  +L   L       +  +  ++ AL +A  + +  + E  +    LN+  
Sbjct: 84  PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRS 143

Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSY-STNLAFTP----PEYLRTGRVTPESV---MYSF 238
           ++ D+D+  R+S   +        S+ S    + P    PE L+            M+SF
Sbjct: 144 VMIDEDMTARISMADV------KFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSF 197

Query: 239 GTLLLDLLSGK 249
             LL +L++ +
Sbjct: 198 AVLLWELVTRE 208

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 90.5 bits (225), Expect = 2e-21
 Identities = 41/254 (16%), Positives = 85/254 (33%), Gaps = 44/254 (17%)

Query: 43  EYSIETLRTATSGFAMENIVSE--HGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQF 100
           +   E L   +    +  + +    G      V+K +L N+  +AVK F      D + +
Sbjct: 13  DLGTENLYFQSMPLQLLEVKARGRFGC-----VWKAQLLNE-YVAVKIFPIQ---DKQSW 63

Query: 101 LEEA--RAVGQLRNRRLANLLGCCCEGD----ERLLVAEYMPNDTLAKHLFHWETQPMKW 154
             E    ++  +++  +   +G    G     +  L+  +    +L+  L       + W
Sbjct: 64  QNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA---NVVSW 120

Query: 155 AMRLRVALHIAEALEY--------CTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKN 205
                +A  +A  L Y            + A+ H D+ +  ++  +++   ++ FGL   
Sbjct: 121 NELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK 180

Query: 206 SRDGRSYSTNLAFT------PPEYLRTGRVTPESV-----MYSFGTLLLDLLSGK----H 250
              G+S               PE L               MY+ G +L +L S       
Sbjct: 181 FEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADG 240

Query: 251 IPPSHVSSFLWLVP 264
               ++  F   + 
Sbjct: 241 PVDEYMLPFEEEIG 254

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 82.7 bits (205), Expect = 1e-18
 Identities = 42/196 (21%), Positives = 84/196 (42%), Gaps = 10/196 (5%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
            V++ +      +AVK      +      +FL E   + +LR+  +   +G   +     
Sbjct: 52  TVHRAEWHGS-DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110

Query: 130 LVAEYMPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRI 187
           +V EY+   +L + L      + +    RL +A  +A+ + Y  ++   + H +L +  +
Sbjct: 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNL 170

Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLL 243
           + D     ++  FGL +        S + A TP    PE LR      +S +YSFG +L 
Sbjct: 171 LVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILW 230

Query: 244 DLLSGKHIPPSHVSSF 259
           +L + +  P  +++  
Sbjct: 231 ELATLQ-QPWGNLNPA 245

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 81.2 bits (201), Expect = 4e-18
 Identities = 39/200 (19%), Positives = 83/200 (41%), Gaps = 17/200 (8%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VV K K   +  +A+K+       + + F+ E R + ++ +  +  L G C   +   LV
Sbjct: 23  VVCKAKWRAK-DVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLV 77

Query: 132 AEYMPNDTLAKHLFHWETQP-MKWAMRLRVALHIAEALEYC-TSKERALYH-DLNAYRIV 188
            EY    +L   L   E  P    A  +   L  ++ + Y  + + +AL H DL    ++
Sbjct: 78  MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLL 137

Query: 189 FDDD-VNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLL 243
                   ++  FG    + D +++ TN   +     PE       + +  ++S+G +L 
Sbjct: 138 LVAGGTVLKICDFGT---ACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILW 194

Query: 244 DLLSGKHIPPSHVSSFLWLV 263
           ++++ +  P   +    + +
Sbjct: 195 EVITRR-KPFDEIGGPAFRI 213

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 78.5 bits (194), Expect = 2e-17
 Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 21/200 (10%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERL- 129
           VYKGK      +AVK  N +A      + F  E   + + R+  +   +G       +L 
Sbjct: 40  VYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA--PQLA 95

Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIV 188
           +V ++    +L  HL H      +    + +A   A  ++Y  +K   + H DL +  I 
Sbjct: 96  IVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIF 152

Query: 189 FDDDVNPRLSCFGL--MKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESV---MYSFG 239
             +D   ++  FGL   K+   G      L+ +     PE +R     P S    +Y+FG
Sbjct: 153 LHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212

Query: 240 TLLLDLLSGKHIPPSHVSSF 259
            +L +L++G+ +P S++++ 
Sbjct: 213 IVLYELMTGQ-LPYSNINNR 231

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 77.3 bits (191), Expect = 5e-17
 Identities = 43/197 (21%), Positives = 74/197 (37%), Gaps = 26/197 (13%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDA----RQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
            VY+        +AVK        D         +EA+    L++  +  L G C +   
Sbjct: 22  KVYRAFWIGD-EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN 80

Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC-TSKERALYH-DLNAY 185
             LV E+     L + L     + +   + +  A+ IA  + Y        + H DL + 
Sbjct: 81  LCLVMEFARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSS 137

Query: 186 RIVFDDDVNPRLSC--------FGLMKNSRD-GRSYSTNLAFTP----PEYLRTGRVTPE 232
            I+    V              FGL   +R+  R+   + A       PE +R    +  
Sbjct: 138 NILILQKVENGDLSNKILKITDFGL---AREWHRTTKMSAAGAYAWMAPEVIRASMFSKG 194

Query: 233 SVMYSFGTLLLDLLSGK 249
           S ++S+G LL +LL+G+
Sbjct: 195 SDVWSYGVLLWELLTGE 211

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 77.2 bits (191), Expect = 6e-17
 Identities = 53/177 (29%), Positives = 79/177 (44%), Gaps = 14/177 (7%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-L 130
            V  G      ++AVK     A   A+ FL EA  + QLR+  L  LLG   E    L +
Sbjct: 36  DVMLGDYRGN-KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92

Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVF 189
           V EYM   +L  +L       +     L+ +L + EA+EY         H DL A  ++ 
Sbjct: 93  VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLV 150

Query: 190 DDDVNPRLSCFGLMKNSRDGRSYSTNLAF----TPPEYLRTGRVTPESVMYSFGTLL 242
            +D   ++S FGL   +++  S           T PE LR  + + +S ++SFG LL
Sbjct: 151 SEDNVAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 204

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 77.4 bits (191), Expect = 7e-17
 Identities = 44/198 (22%), Positives = 81/198 (40%), Gaps = 26/198 (13%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDA-------RQFLEEARAVGQLRNRRLANLLGCCC 123
           +V+KG+ ++++  +A+K                 ++F  E   +  L +  +  L G   
Sbjct: 34  LVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH 93

Query: 124 EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DL 182
                 +V E++P   L   L   +  P+KW+++LR+ L IA  +EY  ++   + H DL
Sbjct: 94  NPP--RMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDL 150

Query: 183 NAYRIVFDDDVNPRLSC-----FGLMKNSRDGRSYSTNLAFTP----PEYL--RTGRVTP 231
            +  I           C     FGL   S+      + L        PE +       T 
Sbjct: 151 RSPNIFLQSLDENAPVCAKVADFGL---SQQSVHSVSGLLGNFQWMAPETIGAEEESYTE 207

Query: 232 ESVMYSFGTLLLDLLSGK 249
           ++  YSF  +L  +L+G+
Sbjct: 208 KADTYSFAMILYTILTGE 225

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 78.2 bits (193), Expect = 1e-16
 Identities = 53/176 (30%), Positives = 79/176 (44%), Gaps = 14/176 (7%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LV 131
           V  G      ++AVK     A   A+ FL EA  + QLR+  L  LLG   E    L +V
Sbjct: 209 VMLGDYRGN-KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM   +L  +L       +     L+ +L + EA+EY         H DL A  ++  
Sbjct: 266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVS 323

Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTNLAF----TPPEYLRTGRVTPESVMYSFGTLL 242
           +D   ++S FGL   +++  S           T PE LR  + + +S ++SFG LL
Sbjct: 324 EDNVAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 376

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 77.8 bits (192), Expect = 1e-16
 Identities = 42/186 (22%), Positives = 78/186 (41%), Gaps = 10/186 (5%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V+        ++AVK     +      FL EA  +  L++ +L  L     + +   ++ 
Sbjct: 204 VWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 261

Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDD 191
           E+M   +L   L   E         +  +  IAE + +   +     H DL A  I+   
Sbjct: 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSA 319

Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
            +  +++ FGL +   D    +   A     +T PE +  G  T +S ++SFG LL++++
Sbjct: 320 SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 379

Query: 247 SGKHIP 252
           +   IP
Sbjct: 380 TYGRIP 385

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 77.2 bits (190), Expect = 1e-16
 Identities = 48/243 (19%), Positives = 86/243 (35%), Gaps = 48/243 (19%)

Query: 43  EYSIETLRTATSGFAMENIVSE--HGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQF 100
           E +            +  ++    +G      VYKG L+ +  +AVK F+   + + + F
Sbjct: 2   EAAASEPSLDLDNLKLLELIGRGRYGA-----VYKGSLDERP-VAVKVFS---FANRQNF 52

Query: 101 LEEAR--AVGQLRNRRLANLLGCCCEGD-----ERLLVAEYMPNDTLAKHLFHWETQPMK 153
           + E     V  + +  +A  +            E LLV EY PN +L K+L         
Sbjct: 53  INEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL---HTSD 109

Query: 154 WAMRLRVALHIAEALEY-------CTSKERALYH-DLNAYRIVFDDDVNPRLSCFGL--- 202
           W    R+A  +   L Y           + A+ H DLN+  ++  +D    +S FGL   
Sbjct: 110 WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169

Query: 203 -----MKNSRDGRSYSTNLAFTP----PEYLR-------TGRVTPESVMYSFGTLLLDLL 246
                +    +  + + +   T     PE L              +  MY+ G +  ++ 
Sbjct: 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229

Query: 247 SGK 249
              
Sbjct: 230 MRC 232

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 76.7 bits (189), Expect = 3e-16
 Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 10/186 (5%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V+ G      R+A+K            FL+EA+ + +LR+ +L  L     E +   +V 
Sbjct: 200 VWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257

Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDD 191
           EYM   +L   L     + ++    + +A  IA  + Y         H DL A  I+  +
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGE 315

Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
           ++  +++ FGL +   D    +   A     +T PE    GR T +S ++SFG LL +L 
Sbjct: 316 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 375

Query: 247 SGKHIP 252
           +   +P
Sbjct: 376 TKGRVP 381

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 76.1 bits (188), Expect = 3e-16
 Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 12/179 (6%)

Query: 73  VYKGKLENQ-FRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
           V+ G+L      +AVK    +  PD +  FL+EAR + Q  +  +  L+G C +     +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189

Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVF 189
           V E +        L   E   ++    L++    A  +EY  SK     H DL A   + 
Sbjct: 190 VMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESKC--CIHRDLAARNCLV 246

Query: 190 DDDVNPRLSCFGLMKNSRDGRSYSTNLAF------TPPEYLRTGRVTPESVMYSFGTLL 242
            +    ++S FG+ +   DG   ++          T PE L  GR + ES ++SFG LL
Sbjct: 247 TEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILL 305

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 76.7 bits (189), Expect = 4e-16
 Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 10/187 (5%)

Query: 73  VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       ++
Sbjct: 236 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            E+M    L  +L     Q +   + L +A  I+ A+EY   K     H +L A   +  
Sbjct: 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVG 352

Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           ++   +++ FGL +        +   A     +T PE L   + + +S +++FG LL ++
Sbjct: 353 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412

Query: 246 LSGKHIP 252
            +    P
Sbjct: 413 ATYGMSP 419

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 76.5 bits (188), Expect = 4e-16
 Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 10/186 (5%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V+ G      R+A+K            FL+EA+ + +LR+ +L  L     E +   +V 
Sbjct: 283 VWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340

Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDD 191
           EYM   +L   L     + ++    + +A  IA  + Y         H DL A  I+  +
Sbjct: 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGE 398

Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
           ++  +++ FGL +   D    +   A     +T PE    GR T +S ++SFG LL +L 
Sbjct: 399 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 458

Query: 247 SGKHIP 252
           +   +P
Sbjct: 459 TKGRVP 464

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 74.1 bits (183), Expect = 7e-16
 Identities = 43/187 (22%), Positives = 87/187 (46%), Gaps = 10/187 (5%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VV  GK + Q+ +AVK     +     +F +EA+ + +L + +L    G C +     +V
Sbjct: 23  VVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV 81

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EY+ N  L  +L     + ++ +  L +   + E + +  S +    H DL A   + D
Sbjct: 82  TEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLESHQ--FIHRDLAARNCLVD 138

Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDL 245
            D+  ++S FG+ +   D +  S+        ++ PE     + + +S +++FG L+ ++
Sbjct: 139 RDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEV 198

Query: 246 LSGKHIP 252
            S   +P
Sbjct: 199 FSLGKMP 205

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 73.8 bits (182), Expect = 1e-15
 Identities = 45/188 (23%), Positives = 83/188 (44%), Gaps = 10/188 (5%)

Query: 72  VVYKGKLENQ-FRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
            VY+G  +     +AVK        +  +FL+EA  + ++++  L  LLG C       +
Sbjct: 28  EVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86

Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVF 189
           + E+M    L  +L     Q +   + L +A  I+ A+EY   K     H DL A   + 
Sbjct: 87  ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLV 144

Query: 190 DDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLD 244
            ++   +++ FGL +        +   A     +T PE L   + + +S +++FG LL +
Sbjct: 145 GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204

Query: 245 LLSGKHIP 252
           + +    P
Sbjct: 205 IATYGMSP 212

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 73.8 bits (182), Expect = 1e-15
 Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 10/186 (5%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
           V+ G      ++AVK   + +      FL EA  + QL+++RL  L     + +   ++ 
Sbjct: 29  VWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86

Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDD 191
           EYM N +L   L       +     L +A  IAE + +   +     H DL A  I+  D
Sbjct: 87  EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANILVSD 144

Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
            ++ +++ FGL +   D    +   A     +T PE +  G  T +S ++SFG LL +++
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204

Query: 247 SGKHIP 252
           +   IP
Sbjct: 205 THGRIP 210

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 72.6 bits (179), Expect = 2e-15
 Identities = 46/191 (24%), Positives = 79/191 (41%), Gaps = 18/191 (9%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           +V+ G   N+ ++A+K     A      F+EEA  + +L + +L  L G C E     LV
Sbjct: 23  LVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            E+M +  L+ +L           + L + L + E + Y       + H DL A   +  
Sbjct: 82  TEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEEAC--VIHRDLAARNCL-- 136

Query: 191 DDVNPRLSC----FGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTL 241
             V          FG+ +   D +  S+        +  PE     R + +S ++SFG L
Sbjct: 137 --VGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 194

Query: 242 LLDLLSGKHIP 252
           + ++ S   IP
Sbjct: 195 MWEVFSEGKIP 205

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 72.3 bits (178), Expect = 4e-15
 Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 10/187 (5%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VV  GK   Q+ +A+K     +     +F+EEA+ +  L + +L  L G C +     ++
Sbjct: 39  VVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EYM N  L  +L     +     + L +   + EA+EY  SK+    H DL A   + +
Sbjct: 98  TEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVN 154

Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           D    ++S FGL +   D    S+  +     ++PPE L   + + +S +++FG L+ ++
Sbjct: 155 DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214

Query: 246 LSGKHIP 252
            S   +P
Sbjct: 215 YSLGKMP 221

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 71.2 bits (175), Expect = 1e-14
 Identities = 37/201 (18%), Positives = 71/201 (35%), Gaps = 23/201 (11%)

Query: 73  VYKGKLENQFR-IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
             K         + +K   R      R FL+E + +  L +  +   +G   +      +
Sbjct: 26  AIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
            EY+   TL   +         W+ R+  A  IA  + Y  S    + H DLN++  +  
Sbjct: 86  TEYIKGGTLRGII-KSMDSQYPWSQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVR 142

Query: 191 DDVNPRLSCFGL--------------MKNSRDGRSYSTNLAFTP----PEYLRTGRVTPE 232
           ++ N  ++ FGL                  +  R     +   P    PE +       +
Sbjct: 143 ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEK 202

Query: 233 SVMYSFGTLLLDLLSGKHIPP 253
             ++SFG +L +++   +  P
Sbjct: 203 VDVFSFGIVLCEIIGRVNADP 223

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 68.5 bits (168), Expect = 1e-13
 Identities = 32/199 (16%), Positives = 67/199 (33%), Gaps = 27/199 (13%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
            VY G+   +  +A++  +     +   + F  E  A  Q R+  +   +G C       
Sbjct: 48  QVYHGRWHGE--VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA 105

Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIV 188
           ++       TL   +       +      ++A  I + + Y  +K   + H DL +  + 
Sbjct: 106 IITSLCKGRTLYSVV-RDAKIVLDVNKTRQIAQEIVKGMGYLHAK--GILHKDLKSKNVF 162

Query: 189 FDDDVNPRLSCFGL--MKNSRDGRSYSTNLAFTP-------PEYLRTGRVTPESVM---- 235
           +D+     ++ FGL  +            L           PE +R      E       
Sbjct: 163 YDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFS 221

Query: 236 -----YSFGTLLLDLLSGK 249
                ++ GT+  +L + +
Sbjct: 222 KHSDVFALGTIWYELHARE 240

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 66.2 bits (162), Expect = 6e-13
 Identities = 41/198 (20%), Positives = 79/198 (39%), Gaps = 21/198 (10%)

Query: 73  VYKGKL--------ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
           ++KG           ++  + +K  +++    +  F E A  + +L ++ L    G C  
Sbjct: 24  IFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83

Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLN 183
           GDE +LV E++   +L  +L       +    +L VA  +A A+ +       L H ++ 
Sbjct: 84  GDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEVAKQLAAAMHFLEENT--LIHGNVC 140

Query: 184 AYRI-VFDDDVNPR-------LSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRV-TPESV 234
           A  I +  ++           LS  G+             + + PPE +   +     + 
Sbjct: 141 AKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATD 200

Query: 235 MYSFGTLLLDLLSGKHIP 252
            +SFGT L ++ SG   P
Sbjct: 201 KWSFGTTLWEICSGGDKP 218

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 66.2 bits (162), Expect = 8e-13
 Identities = 47/197 (23%), Positives = 79/197 (40%), Gaps = 24/197 (12%)

Query: 73  VYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
           V  G+L    + +  +A+K          R+ FL EA  +GQ  +  +  L G   +   
Sbjct: 61  VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120

Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYR 186
            ++V EYM N +L   L   + Q       + +   IA  ++Y +       H DL A  
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQF-TVIQLVGMLRGIASGMKYLSDM--GYVHRDLAARN 177

Query: 187 IVFDDDVNPRLSC----FGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVM 235
           I+    +N  L C    FGL +   D       +         T PE +   + T  S +
Sbjct: 178 IL----INSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233

Query: 236 YSFGTLLLDLLSGKHIP 252
           +S+G +L +++S    P
Sbjct: 234 WSYGIVLWEVMSYGERP 250

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 65.8 bits (161), Expect = 1e-12
 Identities = 43/188 (22%), Positives = 72/188 (38%), Gaps = 24/188 (12%)

Query: 72  VVYKGKL----ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
            V  G+L    +    +A+K           R FL EA  +GQ  +  +  L G    G 
Sbjct: 64  EVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR 123

Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
             ++V EYM N +L   L   + Q       + +   +   + Y +       H DL A 
Sbjct: 124 LAMIVTEYMENGSLDTFLRTHDGQF-TIMQLVGMLRGVGAGMRYLSDL--GYVHRDLAAR 180

Query: 186 RIVFDDDVNPRLSC----FGL---MKNSRDGRSYSTNLAF----TPPEYLRTGRVTPESV 234
            ++    V+  L C    FGL   +++  D    +T        T PE +     +  S 
Sbjct: 181 NVL----VDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASD 236

Query: 235 MYSFGTLL 242
           ++SFG ++
Sbjct: 237 VWSFGVVM 244

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 65.4 bits (159), Expect = 2e-12
 Identities = 41/193 (21%), Positives = 77/193 (39%), Gaps = 16/193 (8%)

Query: 72  VVYKGKLEN---QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
            V +G       Q  +A+K   +       +  + EA+ + QL N  +  L+G  C+ + 
Sbjct: 351 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAEA 409

Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYR 186
            +LV E      L K L     + +  +    +   ++  ++Y   K     H +L A  
Sbjct: 410 LMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN--FVHRNLAARN 466

Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFG 239
           ++  +    ++S FGL K      SY T        L +  PE +   + +  S ++S+G
Sbjct: 467 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 526

Query: 240 TLLLDLLSGKHIP 252
             + + LS    P
Sbjct: 527 VTMWEALSYGQKP 539

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 64.7 bits (158), Expect = 2e-12
 Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 25/188 (13%)

Query: 73  VYKGKL-----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
           VYKG L     + +  +A+K          R  FL EA  +GQ  +  +  L G   +  
Sbjct: 60  VYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK 119

Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
             +++ EYM N  L K L   + +     + + +   IA  ++Y  +      H DL A 
Sbjct: 120 PMMIITEYMENGALDKFLREKDGEFSVLQL-VGMLRGIAAGMKYLANM--NYVHRDLAAR 176

Query: 186 RIVFDDDVNPRLSC----FGL---MKNSRDGRSYSTNLAF----TPPEYLRTGRVTPESV 234
            I+    VN  L C    FGL   +++  +    ++        T PE +   + T  S 
Sbjct: 177 NIL----VNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASD 232

Query: 235 MYSFGTLL 242
           ++SFG ++
Sbjct: 233 VWSFGIVM 240

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 63.9 bits (156), Expect = 5e-12
 Identities = 43/204 (21%), Positives = 78/204 (38%), Gaps = 18/204 (8%)

Query: 72  VVYKGKLE-----NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
            V   + +         +AVK+   S     R F  E   +  L++  +    G C    
Sbjct: 56  SVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 115

Query: 127 ER--LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLN 183
            R   L+ EY+P  +L  +L   + + +     L+    I + +EY  +K     H DL 
Sbjct: 116 RRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYLGTKR--YIHRDLA 172

Query: 184 AYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVMY 236
              I+ +++   ++  FGL K     + Y               PE L   + +  S ++
Sbjct: 173 TRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVW 232

Query: 237 SFGTLLLDLLSGKHIPPSHVSSFL 260
           SFG +L +L +      S  + F+
Sbjct: 233 SFGVVLYELFTYIEKSKSPPAEFM 256

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 64.1 bits (156), Expect = 6e-12
 Identities = 40/191 (20%), Positives = 72/191 (37%), Gaps = 15/191 (7%)

Query: 73  VYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
           V++G           +A+K          R+ FL+EA  + Q  +  +  L+G     + 
Sbjct: 406 VHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENP 464

Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYR 186
             ++ E      L   L   +   +  A  +  A  ++ AL Y  SK     H D+ A  
Sbjct: 465 VWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLESKR--FVHRDIAARN 521

Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTL 241
           ++   +   +L  FGL +   D   Y  +       +  PE +   R T  S ++ FG  
Sbjct: 522 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 581

Query: 242 LLDLLSGKHIP 252
           + ++L     P
Sbjct: 582 MWEILMHGVKP 592

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 62.7 bits (153), Expect = 1e-11
 Identities = 45/190 (23%), Positives = 69/190 (36%), Gaps = 29/190 (15%)

Query: 73  VYKGKLEN-----QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
           V     +         +AVK     A P  R  + +E   +  L +  +    GCC +  
Sbjct: 47  VSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG 106

Query: 127 ER--LLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
                LV EY+P     D L +H              L  A  I E + Y  ++     H
Sbjct: 107 AASLQLVMEYVPLGSLRDYLPRHSIGLAQL-------LLFAQQICEGMAYLHAQH--YIH 157

Query: 181 -DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPE 232
            DL A  ++ D+D   ++  FGL K   +G  Y     +         PE L+  +    
Sbjct: 158 RDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYA 217

Query: 233 SVMYSFGTLL 242
           S ++SFG  L
Sbjct: 218 SDVWSFGVTL 227

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 62.3 bits (152), Expect = 1e-11
 Identities = 44/207 (21%), Positives = 79/207 (38%), Gaps = 24/207 (11%)

Query: 72  VVYKGKLE-----NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
            V   + +         +AVK+   S     R F  E   +  L++  +    G C    
Sbjct: 25  SVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 84

Query: 127 ER--LLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
            R   L+ EY+P     D L KH    +   +     L+    I + +EY  +K R ++ 
Sbjct: 85  RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTK-RYIHR 138

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPES 233
           DL    I+ +++   ++  FGL K     + +               PE L   + +  S
Sbjct: 139 DLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVAS 198

Query: 234 VMYSFGTLLLDLLSGKHIPPSHVSSFL 260
            ++SFG +L +L +      S  + F+
Sbjct: 199 DVWSFGVVLYELFTYIEKSKSPPAEFM 225

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 62.3 bits (152), Expect = 1e-11
 Identities = 39/192 (20%), Positives = 72/192 (37%), Gaps = 15/192 (7%)

Query: 72  VVYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
            V++G           +A+K          R+ FL+EA  + Q  +  +  L+G     +
Sbjct: 30  DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITEN 88

Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
              ++ E      L   L   +      ++ +  A  ++ AL Y  SK     H D+ A 
Sbjct: 89  PVWIIMELCTLGELRSFLQVRKYSLDLASL-ILYAYQLSTALAYLESKR--FVHRDIAAR 145

Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGT 240
            ++   +   +L  FGL +   D   Y  +       +  PE +   R T  S ++ FG 
Sbjct: 146 NVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 205

Query: 241 LLLDLLSGKHIP 252
            + ++L     P
Sbjct: 206 CMWEILMHGVKP 217

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 62.3 bits (152), Expect = 2e-11
 Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 18/185 (9%)

Query: 73  VYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
           VY G+     +N+ + A+K  +R       + FL E   +  L +  +  L+G     + 
Sbjct: 37  VYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG 96

Query: 128 RLL-VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
               +  YM +  L + +   +  P    + +   L +A  +EY   ++    H DL A 
Sbjct: 97  LPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-ISFGLQVARGMEYLAEQK--FVHRDLAAR 153

Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAF--------TPPEYLRTGRVTPESVMYS 237
             + D+    +++ FGL ++  D   YS             T  E L+T R T +S ++S
Sbjct: 154 NCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWS 213

Query: 238 FGTLL 242
           FG LL
Sbjct: 214 FGVLL 218

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 61.9 bits (151), Expect = 2e-11
 Identities = 48/188 (25%), Positives = 78/188 (41%), Gaps = 24/188 (12%)

Query: 73  VYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
           VY G L      +   AVK  NR         FL E   +    +  + +LLG C   + 
Sbjct: 41  VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100

Query: 128 -RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
             L+V  YM +  L   + +    P    + +   L +A+ ++Y  SK+    H DL A 
Sbjct: 101 SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASKK--FVHRDLAAR 157

Query: 186 RIVFDDDVNPRLSCFGLMKNSRD------GRSYSTNLAF-----TPPEYLRTGRVTPESV 234
             + D+    +++ FGL   +RD         ++   A         E L+T + T +S 
Sbjct: 158 NCMLDEKFTVKVADFGL---ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSD 214

Query: 235 MYSFGTLL 242
           ++SFG LL
Sbjct: 215 VWSFGVLL 222

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 61.9 bits (151), Expect = 2e-11
 Identities = 38/184 (20%), Positives = 70/184 (38%), Gaps = 17/184 (9%)

Query: 72  VVYKGKL-----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
            VYKG       + +  +A+K    +  P A +  L+EA  +  + N  +  LLG  C  
Sbjct: 30  TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLT 88

Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNA 184
               L+ + MP   L  ++       +     L   + IA+ + Y   +   L H DL A
Sbjct: 89  STVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAA 145

Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPPEYLRTGRVTPESVMYSF 238
             ++     + +++ FGL K          +            E +     T +S ++S+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205

Query: 239 GTLL 242
           G  +
Sbjct: 206 GVTV 209

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 61.4 bits (150), Expect = 2e-11
 Identities = 39/182 (21%), Positives = 71/182 (39%), Gaps = 15/182 (8%)

Query: 72  VVYKGKLEN----QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
            VY+G   N    +  +AVK   +    D ++ F+ EA  +  L +  +  L+G   E +
Sbjct: 27  EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG-IIEEE 85

Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
              ++ E  P   L  +L   +       + +  +L I +A+ Y  S      H D+   
Sbjct: 86  PTWIIMELYPYGELGHYLERNKNSLKVLTL-VLYSLQICKAMAYLESIN--CVHRDIAVR 142

Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGT 240
            I+       +L  FGL +   D   Y  ++      +  PE +   R T  S ++ F  
Sbjct: 143 NILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAV 202

Query: 241 LL 242
            +
Sbjct: 203 CM 204

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 61.1 bits (149), Expect = 3e-11
 Identities = 42/184 (22%), Positives = 78/184 (42%), Gaps = 18/184 (9%)

Query: 72  VVYKGKLENQFR---IAVK--RFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
            V KG  + +     +AVK  +   +      + L EA  + QL N  +  ++G  CE +
Sbjct: 32  TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIG-ICEAE 90

Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
             +LV E      L K+L   + + +K    + +   ++  ++Y         H DL A 
Sbjct: 91  SWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN--FVHRDLAAR 146

Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVMYSF 238
            ++       ++S FGL K  R   +Y    T+  +      PE +   + + +S ++SF
Sbjct: 147 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 206

Query: 239 GTLL 242
           G L+
Sbjct: 207 GVLM 210

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 61.2 bits (149), Expect = 4e-11
 Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 24/192 (12%)

Query: 73  VYKGKLENQF------RIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
           VY+G  +         R+A+K  N +A    R  FL EA  + +     +  LLG   +G
Sbjct: 41  VYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100

Query: 126 DERLLVAEYMPNDTLAKHL--------FHWETQPMKWAMRLRVALHIAEALEYCTSKERA 177
              L++ E M    L  +L         +    P   +  +++A  IA+ + Y  + +  
Sbjct: 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-- 158

Query: 178 LYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPPEYLRTGRVT 230
             H DL A   +  +D   ++  FG+ ++  +   Y              PE L+ G  T
Sbjct: 159 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 218

Query: 231 PESVMYSFGTLL 242
             S ++SFG +L
Sbjct: 219 TYSDVWSFGVVL 230

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 60.8 bits (148), Expect = 5e-11
 Identities = 34/184 (18%), Positives = 70/184 (38%), Gaps = 17/184 (9%)

Query: 72  VVYKGKLENQFR-----IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
            V+KG    +       + +K     +   + Q   +   A+G L +  +  LLG  C G
Sbjct: 28  TVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLG-LCPG 86

Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNA 184
               LV +Y+P  +L  H+       +   + L   + IA+ + Y       + H +L A
Sbjct: 87  SSLQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQIAKGMYYLEEHG--MVHRNLAA 143

Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSF 238
             ++       +++ FG+                   + +   E +  G+ T +S ++S+
Sbjct: 144 RNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSY 203

Query: 239 GTLL 242
           G  +
Sbjct: 204 GVTV 207

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 60.3 bits (147), Expect = 7e-11
 Identities = 40/197 (20%), Positives = 75/197 (38%), Gaps = 24/197 (12%)

Query: 72  VVYKGKL---ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
            V +G     + Q  +A+K   +       +  + EA+ + QL N  +  L+G  C+ + 
Sbjct: 25  SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAEA 83

Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYR 186
            +LV E      L K L     + +  +    +   ++  ++Y   K     H DL A  
Sbjct: 84  LMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN--FVHRDLAARN 140

Query: 187 IVFDDDVNPRLSC----FGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVM 235
           ++    +  R       FGL K      SY    +   +      PE +   + +  S +
Sbjct: 141 VL----LVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDV 196

Query: 236 YSFGTLLLDLLSGKHIP 252
           +S+G  + + LS    P
Sbjct: 197 WSYGVTMWEALSYGQKP 213

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 60.4 bits (147), Expect = 7e-11
 Identities = 38/184 (20%), Positives = 71/184 (38%), Gaps = 17/184 (9%)

Query: 72  VVYKGKL-----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
            VYKG       + +  +A+K    +  P A +  L+EA  +  + N  +  LLG  C  
Sbjct: 30  TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLT 88

Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNA 184
               L+ + MP   L  ++       +     L   + IA+ + Y   +   L H DL A
Sbjct: 89  STVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAA 145

Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSF 238
             ++     + +++ FGL K                 + +   E +     T +S ++S+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205

Query: 239 GTLL 242
           G  +
Sbjct: 206 GVTV 209

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 60.4 bits (147), Expect = 7e-11
 Identities = 38/196 (19%), Positives = 70/196 (35%), Gaps = 31/196 (15%)

Query: 73  VYKGKL----ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
           V + +L     +  ++AVK          D  +FL EA  + +  +  +A L+G      
Sbjct: 39  VREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98

Query: 127 ER------LLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER 176
            +      +++  +M +      L           +     +R  + IA  +EY +S+  
Sbjct: 99  AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN- 157

Query: 177 ALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSY---STNLAF----TPPEYLRT 226
              H DL A   +  +D+   ++ FGL   SR      Y                E L  
Sbjct: 158 -FIHRDLAARNCMLAEDMTVCVADFGL---SRKIYSGDYYRQGCASKLPVKWLALESLAD 213

Query: 227 GRVTPESVMYSFGTLL 242
              T  S +++FG  +
Sbjct: 214 NLYTVHSDVWAFGVTM 229

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 60.1 bits (146), Expect = 1e-10
 Identities = 46/196 (23%), Positives = 68/196 (34%), Gaps = 32/196 (16%)

Query: 73  VYKGKLEN------QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
           VY+G++          ++AVK             FL EA  + +  ++ +   +G   + 
Sbjct: 87  VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146

Query: 126 DERLLVAEYMPNDTLAKHL---FHWETQPMKWAMR--LRVALHIAEALEYCTSKERALYH 180
             R ++ E M    L   L       +QP   AM   L VA  IA   +Y         H
Sbjct: 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIH 204

Query: 181 -DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF----TPPEYLRT 226
            D+ A R        P        FG+   +RD     Y              PPE    
Sbjct: 205 RDIAA-RNCLLTCPGPGRVAKIGDFGM---ARDIYRAGYYRKGGCAMLPVKWMPPEAFME 260

Query: 227 GRVTPESVMYSFGTLL 242
           G  T ++  +SFG LL
Sbjct: 261 GIFTSKTDTWSFGVLL 276

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 43/196 (21%), Positives = 66/196 (33%), Gaps = 32/196 (16%)

Query: 73  VYKGKLEN------QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
           VY+G++          ++AVK             FL EA  + +  ++ +   +G   + 
Sbjct: 46  VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105

Query: 126 DERLLVAEYMPNDTLAKHL-----FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
             R ++ E M    L   L        +   +     L VA  IA   +Y         H
Sbjct: 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIH 163

Query: 181 -DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF----TPPEYLRT 226
            D+ A R        P        FG+   +RD    SY              PPE    
Sbjct: 164 RDIAA-RNCLLTCPGPGRVAKIGDFGM---ARDIYRASYYRKGGCAMLPVKWMPPEAFME 219

Query: 227 GRVTPESVMYSFGTLL 242
           G  T ++  +SFG LL
Sbjct: 220 GIFTSKTDTWSFGVLL 235

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 59.8 bits (145), Expect = 1e-10
 Identities = 47/188 (25%), Positives = 78/188 (41%), Gaps = 24/188 (12%)

Query: 73  VYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
           VY G L      +   AVK  NR         FL E   +    +  + +LLG C   + 
Sbjct: 105 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 164

Query: 128 -RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
             L+V  YM +  L   + +    P    + +   L +A+ +++  SK+    H DL A 
Sbjct: 165 SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFLASKK--FVHRDLAAR 221

Query: 186 RIVFDDDVNPRLSCFGLMKNSRD------GRSYSTNLAF-----TPPEYLRTGRVTPESV 234
             + D+    +++ FGL   +RD         ++   A         E L+T + T +S 
Sbjct: 222 NCMLDEKFTVKVADFGL---ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 278

Query: 235 MYSFGTLL 242
           ++SFG LL
Sbjct: 279 VWSFGVLL 286

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 58.8 bits (143), Expect = 2e-10
 Identities = 43/201 (21%), Positives = 70/201 (34%), Gaps = 37/201 (18%)

Query: 73  VYKGKLEN------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
           V+  +  N      +  +AVK          + F  EA  +  L++  +    G C +GD
Sbjct: 31  VFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 90

Query: 127 ERLLVAEYMPN--------------DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT 172
             ++V EYM +                L           +  +  L +A  IA  + Y  
Sbjct: 91  PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA 150

Query: 173 SKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRDGRSYS--TNLAF----TPP 221
           S+     H DL   R      V   L      FG+ ++      Y    +        PP
Sbjct: 151 SQH--FVHRDLAT-RNCL---VGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP 204

Query: 222 EYLRTGRVTPESVMYSFGTLL 242
           E +   + T ES ++SFG +L
Sbjct: 205 ESIMYRKFTTESDVWSFGVIL 225

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 58.5 bits (142), Expect = 3e-10
 Identities = 38/191 (19%), Positives = 79/191 (41%), Gaps = 19/191 (9%)

Query: 73  VYKGKLE-----NQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
           V   + +        ++AVK     +  +      +E   +  L +  +    G C E  
Sbjct: 37  VELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96

Query: 127 ER--LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLN 183
                L+ E++P+ +L ++L   + + +    +L+ A+ I + ++Y  S++    H DL 
Sbjct: 97  GNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKGMDYLGSRQ--YVHRDLA 153

Query: 184 AYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVMY 236
           A  ++ + +   ++  FGL K     + Y     +         PE L   +    S ++
Sbjct: 154 ARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVW 213

Query: 237 SFGTLLLDLLS 247
           SFG  L +LL+
Sbjct: 214 SFGVTLHELLT 224

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 58.5 bits (142), Expect = 3e-10
 Identities = 45/200 (22%), Positives = 70/200 (35%), Gaps = 36/200 (18%)

Query: 73  VYKGKLENQF------RIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
           V+  +  N         +AVK    ++    + F  EA  +  L+++ +    G C EG 
Sbjct: 57  VFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR 116

Query: 127 ERLLVAEYMPNDTLAKHL-------------FHWETQPMKWAMRLRVALHIAEALEYCTS 173
             L+V EYM +  L + L                   P+     L VA  +A  + Y   
Sbjct: 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG 176

Query: 174 KERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRDGRSY--STNLAF----TPPE 222
                 H DL   R      V   L      FG+ ++      Y             PPE
Sbjct: 177 LH--FVHRDLAT-RNCL---VGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPE 230

Query: 223 YLRTGRVTPESVMYSFGTLL 242
            +   + T ES ++SFG +L
Sbjct: 231 SILYRKFTTESDVWSFGVVL 250

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 58.2 bits (141), Expect = 5e-10
 Identities = 38/212 (17%), Positives = 76/212 (35%), Gaps = 38/212 (17%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL---GCCCEGD--- 126
           V++GK   +  +AVK F+     + R +  E   + Q    R  N+L       + +   
Sbjct: 58  VWRGKWRGE-EVAVKIFS---SREERSWFRE-AEIYQTVMLRHENILGFIAADNKDNGTW 112

Query: 127 -ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEY------CTSKERALY 179
            +  LV++Y  + +L  +L       +     +++AL  A  L +       T  + A+ 
Sbjct: 113 TQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 169

Query: 180 H-DLNAYRIVFDDDVNPRLSCFGL----MKNSRDGRSYSTNLAFTP----PEYLRTGRVT 230
           H DL +  I+   +    ++  GL       +        +   T     PE L    + 
Sbjct: 170 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD-DSIN 228

Query: 231 PESV-------MYSFGTLLLDLLSGKHIPPSH 255
            +         +Y+ G +  ++     I   H
Sbjct: 229 MKHFESFKRADIYAMGLVFWEIARRCSIGGIH 260

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 57.7 bits (140), Expect = 5e-10
 Identities = 40/195 (20%), Positives = 74/195 (37%), Gaps = 30/195 (15%)

Query: 73  VYKGKL----ENQFRIAVK--RFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
           V +G L        ++AVK  + + S+  +  +FL EA  +    +  +  LLG C E  
Sbjct: 50  VMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109

Query: 127 -----ERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA 177
                + +++  +M        L         + +     L+  + IA  +EY +++   
Sbjct: 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-- 167

Query: 178 LYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSY---STNLAF----TPPEYLRTG 227
             H DL A   +  DD+   ++ FGL   S+      Y                E L   
Sbjct: 168 FLHRDLAARNCMLRDDMTVCVADFGL---SKKIYSGDYYRQGRIAKMPVKWIAIESLADR 224

Query: 228 RVTPESVMYSFGTLL 242
             T +S +++FG  +
Sbjct: 225 VYTSKSDVWAFGVTM 239

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 57.7 bits (140), Expect = 5e-10
 Identities = 36/199 (18%), Positives = 71/199 (35%), Gaps = 38/199 (19%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL---GCCCEGD--- 126
           V++G  + +  +AVK F+     D + +  E   +      R  N+L             
Sbjct: 24  VWRGSWQGE-NVAVKIFS---SRDEKSWFRE-TELYNTVMLRHENILGFIASDMTSRHSS 78

Query: 127 -ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEY------CTSKERALY 179
            +  L+  Y    +L  +L   +   +     LR+ L IA  L +       T  + A+ 
Sbjct: 79  TQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIA 135

Query: 180 H-DLNAYRIVFDDDVNPRLSCFGL----MKNSRDGRSYSTNLAFTP----PEYLRTGRVT 230
           H DL +  I+   +    ++  GL     +++      +     T     PE L    + 
Sbjct: 136 HRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD-ETIQ 194

Query: 231 PESV-------MYSFGTLL 242
            +         +++FG +L
Sbjct: 195 VDCFDSYKRVDIWAFGLVL 213

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 57.3 bits (139), Expect = 9e-10
 Identities = 46/196 (23%), Positives = 72/196 (36%), Gaps = 31/196 (15%)

Query: 73  VYKGKLENQF---RIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCEGDE 127
           V K +++        A+KR    A  D  + F  E   + +L  +  + NLLG C     
Sbjct: 41  VLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 100

Query: 128 RLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTS 173
             L  EY P+  L   L               +     +     L  A  +A  ++Y + 
Sbjct: 101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 160

Query: 174 KERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPPEYLRT 226
           K+    H DL A  I+  ++   +++ FGL   SR    Y   T           E L  
Sbjct: 161 KQ--FIHRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMAIESLNY 215

Query: 227 GRVTPESVMYSFGTLL 242
              T  S ++S+G LL
Sbjct: 216 SVYTTNSDVWSYGVLL 231

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 56.8 bits (138), Expect = 1e-09
 Identities = 41/202 (20%), Positives = 72/202 (35%), Gaps = 38/202 (18%)

Query: 73  VYKGKLENQF------RIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
           VYKG L           +A+K     A    R+ F  EA    +L++  +  LLG   + 
Sbjct: 25  VYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD 84

Query: 126 DERLLVAEYMPN--------------DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC 171
               ++  Y  +              D  +          ++    + +   IA  +EY 
Sbjct: 85  QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL 144

Query: 172 TSKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRDGRSYSTNLA------FTP 220
           +S    + H DL A R V    V  +L+      GL +       Y           +  
Sbjct: 145 SSHH--VVHKDL-ATRNVL---VYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMA 198

Query: 221 PEYLRTGRVTPESVMYSFGTLL 242
           PE +  G+ + +S ++S+G +L
Sbjct: 199 PEAIMYGKFSIDSDIWSYGVVL 220

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 57.1 bits (138), Expect = 1e-09
 Identities = 38/196 (19%), Positives = 69/196 (35%), Gaps = 38/196 (19%)

Query: 73  VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL---GCCCEGDER- 128
           V+ GK   + ++AVK F      +   +  E   + Q    R  N+L       +G    
Sbjct: 53  VWMGKWRGE-KVAVKVFF---TTEEASWFRE-TEIYQTVLMRHENILGFIAADIKGTGSW 107

Query: 129 ---LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEY------CTSKERALY 179
               L+ +Y  N +L  +L   ++  +     L++A      L +       T  + A+ 
Sbjct: 108 TQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIA 164

Query: 180 H-DLNAYRIVFDDDVNPRLSCFGL----MKNSRDGRSYSTNLAFTP----PEYLRTGRVT 230
           H DL +  I+   +    ++  GL    + ++ +          T     PE L    + 
Sbjct: 165 HRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLD-ESLN 223

Query: 231 PESV-------MYSFG 239
                      MYSFG
Sbjct: 224 RNHFQSYIMADMYSFG 239

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 54.9 bits (133), Expect = 5e-09
 Identities = 45/196 (22%), Positives = 73/196 (37%), Gaps = 19/196 (9%)

Query: 72  VVYKGKL----ENQFRIAVK--RFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCE 124
           VV +G+          +AVK  + +  + P+A   F+ E  A+  L +R L  L G    
Sbjct: 33  VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG-VVL 91

Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLN 183
                +V E  P  +L   L              R A+ +AE + Y  SK     H DL 
Sbjct: 92  TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLA 148

Query: 184 AYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVMY 236
           A  ++       ++  FGLM+       +     +         PE L+T   +  S  +
Sbjct: 149 ARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTW 208

Query: 237 SFGTLLLDLLSGKHIP 252
            FG  L ++ +    P
Sbjct: 209 MFGVTLWEMFTYGQEP 224

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 53.9 bits (130), Expect = 1e-08
 Identities = 41/188 (21%), Positives = 73/188 (38%), Gaps = 24/188 (12%)

Query: 73  VYKGKL-----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
           V   +           +AVK+   S     R F  E + +  L +  +    G       
Sbjct: 39  VELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98

Query: 128 R--LLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHD 181
           +   LV EY+P+    D L +H    +   +     L  +  I + +EY  S+ R ++ D
Sbjct: 99  QSLRLVMEYLPSGCLRDFLQRHRARLDASRL-----LLYSSQICKGMEYLGSR-RCVHRD 152

Query: 182 LNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESV 234
           L A  I+ + + + +++ FGL K     + Y               PE L     + +S 
Sbjct: 153 LAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSD 212

Query: 235 MYSFGTLL 242
           ++SFG +L
Sbjct: 213 VWSFGVVL 220

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 53.5 bits (129), Expect = 2e-08
 Identities = 43/201 (21%), Positives = 74/201 (36%), Gaps = 33/201 (16%)

Query: 73  VYKGKL--------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRN-RRLANLLGCC 122
           V   +             ++AVK     A        + E   +  +   + + NLLG C
Sbjct: 85  VVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144

Query: 123 CEGDERLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEAL 168
            +     ++ EY     L ++L               H   + +     +  A  +A  +
Sbjct: 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGM 204

Query: 169 EYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPP 221
           EY  SK+    H DL A  ++  +D   +++ FGL ++      Y  +TN         P
Sbjct: 205 EYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 262

Query: 222 EYLRTGRVTPESVMYSFGTLL 242
           E L     T +S ++SFG LL
Sbjct: 263 EALFDRIYTHQSDVWSFGVLL 283

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 53.0 bits (128), Expect = 2e-08
 Identities = 42/204 (20%), Positives = 68/204 (33%), Gaps = 43/204 (21%)

Query: 73  VYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRN-RRLANLLGCCCE 124
           V +         +   ++AVK    +A  D ++  + E + +  L     + NLLG C  
Sbjct: 62  VVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121

Query: 125 GDERLLVAEYMPN------------DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT 172
           G   L++ EY                      F            L  +  +A+ + +  
Sbjct: 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA 181

Query: 173 SKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF---- 218
           SK     H D+ A R V    +          FGL   +RD    S      N       
Sbjct: 182 SKN--CIHRDVAA-RNVL---LTNGHVAKIGDFGL---ARDIMNDSNYIVKGNARLPVKW 232

Query: 219 TPPEYLRTGRVTPESVMYSFGTLL 242
             PE +     T +S ++S+G LL
Sbjct: 233 MAPESIFDCVYTVQSDVWSYGILL 256

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 53.1 bits (128), Expect = 2e-08
 Identities = 39/201 (19%), Positives = 76/201 (37%), Gaps = 33/201 (16%)

Query: 73  VYKGKL--------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCC 122
           V   +         +    +AVK     A        + E   +  + +++ + NLLG C
Sbjct: 51  VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110

Query: 123 CEGDERLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEAL 168
            +     ++ EY     L ++L                   + M +   +     +A  +
Sbjct: 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 170

Query: 169 EYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPP 221
           EY  S++    H DL A  ++  ++   +++ FGL ++  +   Y  +TN         P
Sbjct: 171 EYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228

Query: 222 EYLRTGRVTPESVMYSFGTLL 242
           E L     T +S ++SFG L+
Sbjct: 229 EALFDRVYTHQSDVWSFGVLM 249

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 52.6 bits (127), Expect = 3e-08
 Identities = 45/208 (21%), Positives = 69/208 (33%), Gaps = 47/208 (22%)

Query: 73  VYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRN-RRLANLLGCCCE 124
           V +         +    +AVK    SA    R+  + E + +  L N   + NLLG C  
Sbjct: 39  VVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98

Query: 125 GDERLLVAEYMPNDTLAKHL----------------FHWETQPMKWAMRLRVALHIAEAL 168
           G   L++ EY     L   L                   +   +     L  +  +A+ +
Sbjct: 99  GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 158

Query: 169 EYCTSKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF 218
            +  SK     H DL A R +    +          FGL   +RD    S      N   
Sbjct: 159 AFLASKN--CIHRDL-AARNIL---LTHGRITKICDFGL---ARDIKNDSNYVVKGNARL 209

Query: 219 ----TPPEYLRTGRVTPESVMYSFGTLL 242
                 PE +     T ES ++S+G  L
Sbjct: 210 PVKWMAPESIFNCVYTFESDVWSYGIFL 237

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 52.7 bits (127), Expect = 3e-08
 Identities = 44/208 (21%), Positives = 72/208 (34%), Gaps = 47/208 (22%)

Query: 73  VYKGKL--------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCC 122
           V   +         +    +AVK     A        + E   +  + +++ + NLLG C
Sbjct: 97  VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 156

Query: 123 CEGDERLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEAL 168
            +     ++ EY     L ++L                   + M +   +     +A  +
Sbjct: 157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 216

Query: 169 EYCTSKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF 218
           EY  S++    H DL A R V    V          FGL   +RD     Y   +TN   
Sbjct: 217 EYLASQK--CIHRDL-AARNVL---VTENNVMKIADFGL---ARDINNIDYYKKTTNGRL 267

Query: 219 ----TPPEYLRTGRVTPESVMYSFGTLL 242
                 PE L     T +S ++SFG L+
Sbjct: 268 PVKWMAPEALFDRVYTHQSDVWSFGVLM 295

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 51.9 bits (125), Expect = 6e-08
 Identities = 45/209 (21%), Positives = 72/209 (34%), Gaps = 44/209 (21%)

Query: 73  VYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
           V K              +AVK    +A P   +  L E   + Q+ +  +  L G C + 
Sbjct: 39  VVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98

Query: 126 DERLLVAEYMPNDTLAKHL----------------------FHWETQPMKWAMRLRVALH 163
              LL+ EY    +L   L                       H + + +     +  A  
Sbjct: 99  GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQ 158

Query: 164 IAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSY---STNLA 217
           I++ ++Y    +  L H DL A  I+  +    ++S FGL   SRD          +   
Sbjct: 159 ISQGMQYLAEMK--LVHRDLAARNILVAEGRKMKISDFGL---SRDVYEEDSYVKRSQGR 213

Query: 218 F----TPPEYLRTGRVTPESVMYSFGTLL 242
                   E L     T +S ++SFG LL
Sbjct: 214 IPVKWMAIESLFDHIYTTQSDVWSFGVLL 242

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 49/210 (23%), Positives = 75/210 (35%), Gaps = 46/210 (21%)

Query: 73  VYKGKLENQF------RIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
           V++ +            +AVK     A  D +  F  EA  + +  N  +  LLG C  G
Sbjct: 63  VFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122

Query: 126 DERLLVAEYMPNDTLAKHL----------------------FHWETQPMKWAMRLRVALH 163
               L+ EYM    L + L                            P+  A +L +A  
Sbjct: 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQ 182

Query: 164 IAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRDGRSY--STNL 216
           +A  + Y + ++    H DL A R      V   +      FGL +N      Y    N 
Sbjct: 183 VAAGMAYLSERK--FVHRDL-ATRNCL---VGENMVVKIADFGLSRNIYSADYYKADGND 236

Query: 217 AF----TPPEYLRTGRVTPESVMYSFGTLL 242
           A      PPE +   R T ES ++++G +L
Sbjct: 237 AIPIRWMPPESIFYNRYTTESDVWAYGVVL 266

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 48.5 bits (116), Expect = 8e-07
 Identities = 44/210 (20%), Positives = 69/210 (32%), Gaps = 46/210 (21%)

Query: 73  VYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCE 124
           V               ++AVK     A    R+  + E + + QL  +  + NLLG C  
Sbjct: 61  VMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120

Query: 125 GDERLLVAEYMPN---------------------DTLAKHLFHWETQPMKWAMRLRVALH 163
                L+ EY                        +   +     +   + +   L  A  
Sbjct: 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQ 180

Query: 164 IAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRDGRSY--STNL 216
           +A+ +E+   K     H DL A R V    V          FGL ++     +Y    N 
Sbjct: 181 VAKGMEFLEFKS--CVHRDLAA-RNVL---VTHGKVVKICDFGLARDIMSDSNYVVRGNA 234

Query: 217 AF----TPPEYLRTGRVTPESVMYSFGTLL 242
                   PE L  G  T +S ++S+G LL
Sbjct: 235 RLPVKWMAPESLFEGIYTIKSDVWSYGILL 264

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 48.0 bits (115), Expect = 8e-07
 Identities = 35/200 (17%), Positives = 71/200 (35%), Gaps = 32/200 (16%)

Query: 73  VYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCE 124
           V +              +AVK     A     +  + E + +  +  +  + NLLG C +
Sbjct: 43  VIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 102

Query: 125 GDE-RLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALE 169
                +++ E+     L+ +L                     +     +  +  +A+ +E
Sbjct: 103 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGME 162

Query: 170 YCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPPE 222
           +  S++    H DL A  I+  +    ++  FGL ++      Y    +         PE
Sbjct: 163 FLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 220

Query: 223 YLRTGRVTPESVMYSFGTLL 242
            +     T +S ++SFG LL
Sbjct: 221 TIFDRVYTIQSDVWSFGVLL 240

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 47.4 bits (112), Expect = 2e-06
 Identities = 22/141 (15%), Positives = 36/141 (25%), Gaps = 23/141 (16%)

Query: 129 LLVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DL--- 182
           L         T  + L       + +    RL++ L +   L         L H  L   
Sbjct: 183 LYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH--YGLVHTYLRPV 240

Query: 183 NAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYL----------RTGRVTPE 232
           +   IV D      L+ F  +              F PPE                +T  
Sbjct: 241 D---IVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFA 297

Query: 233 SVMYSFGTLLLDLLSGKHIPP 253
              ++ G  +  +       P
Sbjct: 298 FDTWTLGLAIYWIWCAD--LP 316

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 46.9 bits (111), Expect = 3e-06
 Identities = 25/146 (17%), Positives = 44/146 (30%), Gaps = 26/146 (17%)

Query: 127 ERLLVAEYMPND--TLAKHLFHWETQ--PMKWAMRLRVALHIAEALEYCTSKERALYH-D 181
            R  +   M ++  T  + L    +    +    RL++ L +   L         L H  
Sbjct: 174 SRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH--YGLVHTY 231

Query: 182 L---NAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYL-----------RTG 227
           L   +   IV D      L+ F  +         S +  F PPE             R  
Sbjct: 232 LRPVD---IVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRT 288

Query: 228 RVTPESVMYSFGTLLLDLLSGKHIPP 253
            +T     ++ G ++  +       P
Sbjct: 289 LMTFSFDAWALGLVIYWIWCAD--LP 312

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 46.1 bits (109), Expect = 5e-06
 Identities = 23/211 (10%), Positives = 53/211 (25%), Gaps = 35/211 (16%)

Query: 72  VVYKGK------LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG 125
            VY+         +N+ +  +K    +   +     +    +                  
Sbjct: 80  QVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139

Query: 126 DERLLVAEYMPNDTLAKHL-----FHWETQPMKWAMRLRVALHIAEALEYCTSKERA--- 177
           +  +LV E     TL   +        +  P    +    A+ +   +E     E     
Sbjct: 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISF--AMRMLYMIEQVHDCEIIHGD 197

Query: 178 -------LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEY--- 223
                  L +         D      L   G    S D + +     FT       +   
Sbjct: 198 IKPDNFILGNGFLEQDDEDDLSAGLALIDLGQ---SIDMKLFPKGTIFTAKCETSGFQCV 254

Query: 224 -LRTGRVTPESV-MYSFGTLLLDLLSGKHIP 252
            + + +     +  +     +  +L G ++ 
Sbjct: 255 EMLSNKPWNYQIDYFGVAATVYCMLFGTYMK 285

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 45.8 bits (108), Expect = 5e-06
 Identities = 33/223 (14%), Positives = 52/223 (23%), Gaps = 48/223 (21%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNR---RLANLLGCCCE 124
           VV+  + +E     A+K F   A     +  +  E   A  +L         +       
Sbjct: 77  VVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLP 136

Query: 125 GD-----------------------ERLLVAEYMPND--TLAKHLFHWETQ--PMKWAMR 157
            D                         LL+      D   L   L               
Sbjct: 137 SDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILAL 196

Query: 158 LRVALHIAEALEYCTSKERALYH-DL---NAYRIVFDDDVNPRLSCFGL-MKNSRDGRSY 212
             +   +        SK   L H      N   +    D    L       K    G + 
Sbjct: 197 HILTAQLIRLAANLQSKG--LVHGHFTPDN---LFIMPDGRLMLGDVSALWKVGTRGPAS 251

Query: 213 STNLAFTPPEYL--RTGRVTPESVMYSFGTLLLDLLSGKHIPP 253
           S  + + P E+L   T   T     +  G  +  +       P
Sbjct: 252 SVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF--LP 292

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 45.3 bits (108), Expect = 7e-06
 Identities = 37/174 (21%), Positives = 72/174 (41%), Gaps = 23/174 (13%)

Query: 86  VKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF 145
           +KRF R           E     QL ++ + +++    E D   LV EY+   TL++++ 
Sbjct: 55  LKRFER-----------EVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE 103

Query: 146 HWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMK 204
                P+     +     I + +++  + +  + H D+    I+ D +   ++  FG+ K
Sbjct: 104 --SHGPLSVDTAINFTNQILDGIKH--AHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAK 159

Query: 205 NSRDGRSYSTNLAF-TP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP 253
              +     TN    T     PE  +       + +YS G +L ++L G+  PP
Sbjct: 160 ALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE--PP 211

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 32/200 (16%), Positives = 58/200 (29%), Gaps = 40/200 (20%)

Query: 61  IVSEHGEKAPNVVYKGKLENQFR-IAVK--RFNRSAWPDARQ-FLEEARAVGQLRNRRLA 116
           ++  HG   P   ++       R +A+           D  Q  L     + ++    +A
Sbjct: 35  LLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVA 94

Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER 176
            +L         L+VAE++   +L +     +T P      +R    +A A +   +   
Sbjct: 95  RVLDVVHTRAGGLVVAEWIRGGSLQEVA---DTSPSPVGA-IRAMQSLAAAADA--AHRA 148

Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKN---SRDGRSYSTNLAFTPPEYLRTGRVTPES 233
            +               +P             S DG       A  P          P+ 
Sbjct: 149 GVAL-----S-----IDHPS--------RVRVSIDGDVVLAYPATMPD-------ANPQD 183

Query: 234 VMYSFGTLLLDLLSGKHIPP 253
            +   G  L  LL  +   P
Sbjct: 184 DIRGIGASLYALLVNR--WP 201

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 38/210 (18%), Positives = 66/210 (31%), Gaps = 49/210 (23%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG--------CCC 123
           +VY+G  +N+  +AVKR     +  A +   E +         L             C  
Sbjct: 40  IVYRGMFDNR-DVAVKRILPECFSFADR---EVQL--------LRESDEHPNVIRYFCTE 87

Query: 124 EGDERL-LVAEYMP----NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERAL 178
           +  +   +  E            K   H   +P+   ++          L +  S    +
Sbjct: 88  KDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPIT-LLQ-----QTTSGLAHLHSLN--I 139

Query: 179 YH-DLNAYRIVF-----DDDVNPRLSCFGLMKNSRDGRSYSTNLAF---TP----PEYLR 225
            H DL  + I+         +   +S FGL K    GR   +  +    T     PE L 
Sbjct: 140 VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLS 199

Query: 226 ---TGRVTPESVMYSFGTLLLDLLSGKHIP 252
                  T    ++S G +   ++S    P
Sbjct: 200 EDCKENPTYTVDIFSAGCVFYYVISEGSHP 229

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 39/183 (21%), Positives = 66/183 (36%), Gaps = 21/183 (11%)

Query: 83  RIAVK--RFNRSAWPDARQ-FLEEARAVGQLRNRRLANL--LGCCCEGDERL-LVAEYMP 136
            +A+K      S+ P  R     EAR  G+L+   +  +   G   E D +L +    + 
Sbjct: 61  IVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFG---EIDGQLYVDMRLIN 117

Query: 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNP 195
              LA  L      P+     + +   I  AL+   +      H D+    I+   D   
Sbjct: 118 GVDLAAMLR--RQGPLAPPRAVAIVRQIGSALDA--AHAAGATHRDVKPENILVSADDFA 173

Query: 196 RLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKH 250
            L  FG+   + D +          L +  PE       T  + +Y+   +L + L+G  
Sbjct: 174 YLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGS- 232

Query: 251 IPP 253
            PP
Sbjct: 233 -PP 234

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 39.5 bits (92), Expect = 8e-04
 Identities = 35/180 (19%), Positives = 65/180 (36%), Gaps = 25/180 (13%)

Query: 85  AVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERL-----LVAEYMPND 138
            +K    S   +A+   + E + + ++ +  +  +       D        +V EY+   
Sbjct: 110 VLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQ 169

Query: 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DL---NAYRIVFDDDVN 194
           +L +       Q +  A  +   L I  AL Y       L + DL   N   ++ ++ + 
Sbjct: 170 SLKRSK----GQKLPVAEAIAYLLEILPALSY--LHSIGLVYNDLKPENI--MLTEEQL- 220

Query: 195 PRLSCFGLMKN-SRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP 253
            +L   G +   +  G  Y T   F  PE +R    T  + +Y+ G  L  L      P 
Sbjct: 221 -KLIDLGAVSRINSFGYLYGT-PGFQAPEIVR-TGPTVATDIYTVGRTLAALTLDL--PT 275

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	264
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.98
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.96
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.93
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.87
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.77
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.51
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.37
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.32
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	99.18
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.89
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.77
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.74
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.69
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.58
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.55
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.39
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.31
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.25
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.99
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.86
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.85
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.81
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.79
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.76
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	97.67
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	97.55
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	97.48
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	97.37
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	97.06
3mes_A	424	Choline kinase; malaria, structural genomics, stru	96.96
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	96.67
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	96.42
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	95.82
4ann_A	215	ESSB; membrane protein, membrane secretion, ESS ty	91.18
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	90.86
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	85.2

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=5.5e-54  Score=361.76  Aligned_cols=199  Identities=17%  Similarity=0.177  Sum_probs=174.2

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      +.|+++++||+|+||+||++++ .+++.||+|++....  ....+.+.+|++++++++||||+++++++.+++.+|||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            5689999999999999999995 568999999997653  2335678999999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----  209 (264)
                      |+++|+|.+++.......+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++.....    
T Consensus       104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~  182 (350)
T 4b9d_A          104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA  182 (350)
T ss_dssp             CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHH
T ss_pred             CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHHHEEECCCCCEEEcccccceeecCCcccc
Confidence            99999999999765566789999999999999999999999 9999999999999999999999999999876543    


Q ss_pred             CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ....||+.|+|||++.+..|+.++|||||||++|||++|+.||....
T Consensus       183 ~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~  229 (350)
T 4b9d_A          183 RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS  229 (350)
T ss_dssp             HHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence            23468999999999999999999999999999999999999998654

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=8.4e-54  Score=360.07  Aligned_cols=196  Identities=17%  Similarity=0.269  Sum_probs=178.4

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      ..|+++++||+|+||+||+|.+ .+|+.||+|+++.......+.+.+|+++|++++||||+++++++.+.+.+||||||+
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            4488999999999999999995 568999999998665555667889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----Cc
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS  211 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~~  211 (264)
                      ++|+|.+++.+   ..+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.....    ..
T Consensus       154 ~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~  229 (346)
T 4fih_A          154 EGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS  229 (346)
T ss_dssp             TTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred             CCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccc
Confidence            99999999964   4599999999999999999999999 9999999999999999999999999999865432    34


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ..||+.|+|||++.+..|+.++|||||||++|||++|++||.+..
T Consensus       230 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~  274 (346)
T 4fih_A          230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP  274 (346)
T ss_dssp             CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence            579999999999999999999999999999999999999997654

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.7e-53  Score=353.29  Aligned_cols=198  Identities=17%  Similarity=0.189  Sum_probs=178.2

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      ++|++++.||+|+||+||+++. .+++.||+|++.+..   ....+.+.+|++++++++||||+++++++.+.+.++|||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            4589999999999999999994 568999999997532   233567899999999999999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---  209 (264)
                      ||+++|+|.+++..  ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.....   
T Consensus       112 Ey~~gG~L~~~i~~--~~~l~e~~~~~~~~qi~~al~ylH~~-~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~  188 (311)
T 4aw0_A          112 SYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ  188 (311)
T ss_dssp             CCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred             ecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence            99999999999973  45799999999999999999999999 9999999999999999999999999999865322   


Q ss_pred             ---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       210 ---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                         ....||+.|+|||++.+..++.++|||||||++|||++|++||.....
T Consensus       189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~  239 (311)
T 4aw0_A          189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE  239 (311)
T ss_dssp             CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence               245799999999999999999999999999999999999999986543

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.1e-52  Score=361.45  Aligned_cols=196  Identities=17%  Similarity=0.269  Sum_probs=179.1

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      ..|+++++||+|+||.||+|.+ .+|+.||+|++........+.+.+|+.+|++++||||+++++++.+.+.+|||||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            4588999999999999999995 568999999998766556677899999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----Cc
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS  211 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~~  211 (264)
                      ++|+|.+++..   ..+++..+..++.||+.||.|||++ ||+||||||+|||++.+|.+||+|||+++.....    ..
T Consensus       231 ~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~-~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~  306 (423)
T 4fie_A          231 EGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS  306 (423)
T ss_dssp             TTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCC
T ss_pred             CCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHC-CeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccc
Confidence            99999999963   4599999999999999999999999 9999999999999999999999999999865432    34


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ..||+.|||||++.+..|+.++|||||||++|||++|++||.+..
T Consensus       307 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~  351 (423)
T 4fie_A          307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP  351 (423)
T ss_dssp             CEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence            578999999999999999999999999999999999999997654

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1e-52  Score=348.75  Aligned_cols=199  Identities=23%  Similarity=0.352  Sum_probs=174.7

Q ss_pred             ccccccccCCCCCCCeEEEEEeC------CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      +++.+.++||+|+||+||+|.+.      ++..||+|+++.......++|.+|++++++++||||++++++|.+++..+|
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            44677888999999999999863      477899999987766667789999999999999999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcc
Q 024659          131 VAEYMPNDTLAKHLFHW-----------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSC  199 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~-----------~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~d  199 (264)
                      ||||+++|+|.+++...           ....+++.+++.++.||+.||.|||++ +|+||||||+|||+++++.+||+|
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHRDlKp~NILl~~~~~~Ki~D  171 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNCLVGENLLVKIGD  171 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECC
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCccCHhhEEECCCCcEEECC
Confidence            99999999999999642           235799999999999999999999999 999999999999999999999999


Q ss_pred             cCCCcccCCC------CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          200 FGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       200 fg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ||+++.....      ....+|+.|+|||++.+..++.++|||||||++|||+| |+.||....
T Consensus       172 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~  235 (299)
T 4asz_A          172 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS  235 (299)
T ss_dssp             CSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred             cccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence            9999754332      22357899999999999999999999999999999998 899997644

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.4e-51  Score=342.36  Aligned_cols=197  Identities=19%  Similarity=0.314  Sum_probs=169.3

Q ss_pred             CCccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      .++++++.++||+|+||+||+|++.+  .||+|.++...  ....+.|.+|++++++++||||+++++++. .+.++|||
T Consensus        34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVm  110 (307)
T 3omv_A           34 EASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVT  110 (307)
T ss_dssp             CTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred             cHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEE
Confidence            45667888999999999999999764  59999987543  334567999999999999999999999885 45789999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----  208 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----  208 (264)
                      ||+++|+|.+++.. ....+++.++..++.||+.||.|||++ +|+||||||+|||+++++.+||+|||+++....    
T Consensus       111 Ey~~gGsL~~~l~~-~~~~l~~~~~~~i~~qia~gL~yLH~~-~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~  188 (307)
T 3omv_A          111 QWCEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAK-NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS  188 (307)
T ss_dssp             ECCSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred             EcCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence            99999999999964 445799999999999999999999999 999999999999999999999999999986432    


Q ss_pred             --CCcccccccccccccccC---CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 --GRSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 --~~~~~~~~~y~aPE~~~~---~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                        .....||+.|||||++.+   ..++.++|||||||+||||+||+.||....
T Consensus       189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~  241 (307)
T 3omv_A          189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN  241 (307)
T ss_dssp             -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC
Confidence              123478999999999964   358999999999999999999999997543

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1e-51  Score=347.18  Aligned_cols=199  Identities=23%  Similarity=0.348  Sum_probs=171.0

Q ss_pred             ccccccccCCCCCCCeEEEEEeC------CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      .++.+.++||+|+||+||+|++.      ++..||||+++.......++|.+|++++++++||||++++++|.+.+..+|
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            44567778999999999999864      478899999987766667789999999999999999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEE
Q 024659          131 VAEYMPNDTLAKHLFHWE-------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL  197 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~-------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl  197 (264)
                      ||||+++|+|.+++....             ..++++.+++.++.||+.||.|||++ +|+||||||+|||+++++.+||
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHRDLKp~NILl~~~~~~Ki  199 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL-HFVHRDLATRNCLVGQGLVVKI  199 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEETTTEEEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecccccHhhEEECCCCcEEE
Confidence            999999999999986421             24689999999999999999999999 9999999999999999999999


Q ss_pred             cccCCCcccCCC------CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          198 SCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       198 ~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      +|||+++.....      ....+|+.|+|||++.+..++.++|||||||++|||+| |+.||....
T Consensus       200 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~  265 (329)
T 4aoj_A          200 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS  265 (329)
T ss_dssp             CCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC
T ss_pred             cccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC
Confidence            999999865332      23467899999999999999999999999999999999 899997643

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=9.7e-52  Score=344.29  Aligned_cols=200  Identities=22%  Similarity=0.324  Sum_probs=173.9

Q ss_pred             CccccccccCCCCCCCeEEEEEeC------CCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcc
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  128 (264)
                      ++..+++++||+|+||+||+|.+.      +++.||||+++.... ...++|.+|+.++++++||||++++|+|.+++..
T Consensus        25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~  104 (308)
T 4gt4_A           25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL  104 (308)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEE
Confidence            455678889999999999999863      467899999976532 3356799999999999999999999999999999


Q ss_pred             eEEEecCCCCCHHHhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN  194 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~  194 (264)
                      +|||||+++|+|.+++....              ...+++..++.++.||+.||.|||++ +++||||||+|||+++++.
T Consensus       105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHRDLK~~NILl~~~~~  183 (308)
T 4gt4_A          105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH-HVVHKDLATRNVLVYDKLN  183 (308)
T ss_dssp             EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGC
T ss_pred             EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-CCCCCCccccceEECCCCC
Confidence            99999999999999996421              23689999999999999999999999 9999999999999999999


Q ss_pred             eEEcccCCCcccCC------CCcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          195 PRLSCFGLMKNSRD------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       195 ~kl~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      +||+|||+++....      .....+|+.|+|||++.++.++.++|||||||++|||+| |..||....
T Consensus       184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~  252 (308)
T 4gt4_A          184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS  252 (308)
T ss_dssp             EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC
T ss_pred             EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC
Confidence            99999999975432      223467899999999999999999999999999999998 888987644

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.7e-51  Score=336.67  Aligned_cols=198  Identities=21%  Similarity=0.293  Sum_probs=163.6

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC---hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      .++|++++.||+|+||+||++.. .+++.||+|++++...   .....+.+|++++++++||||+++++++.+.+..++|
T Consensus        12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv   91 (275)
T 3hyh_A           12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV   91 (275)
T ss_dssp             --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence            35689999999999999999994 5689999999976432   2245689999999999999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--  209 (264)
                      |||+ +|+|.+++..  ...+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+++.....  
T Consensus        92 mEy~-~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~-~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~  167 (275)
T 3hyh_A           92 IEYA-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRH-KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF  167 (275)
T ss_dssp             EECC-CEEHHHHHHH--SCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred             EeCC-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence            9999 6789999874  45799999999999999999999999 9999999999999999999999999999865433  


Q ss_pred             -CcccccccccccccccCCCC-CCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          210 -RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       210 -~~~~~~~~y~aPE~~~~~~~-~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                       ....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.....
T Consensus       168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~  217 (275)
T 3hyh_A          168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI  217 (275)
T ss_dssp             -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH
Confidence             34579999999999998876 5799999999999999999999986543

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=9.3e-52  Score=346.65  Aligned_cols=194  Identities=20%  Similarity=0.191  Sum_probs=171.8

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      ...+++.++||+|+||.||+|++ .+|+.||+|+++....     ..+|+.++++++||||+++++++.+++.++|||||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  131 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL  131 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            45577888899999999999995 5689999999986432     23699999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC-CeEEcccCCCcccCCC----
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRDG----  209 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~-~~kl~dfg~~~~~~~~----  209 (264)
                      +++|+|.+++..  ...+++..+..++.||+.||.|||++ +|+||||||+|||++.++ .+||+|||+++.....    
T Consensus       132 ~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~  208 (336)
T 4g3f_A          132 LEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTR-RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK  208 (336)
T ss_dssp             CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred             cCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence            999999999973  45799999999999999999999999 999999999999999887 6999999999865432    


Q ss_pred             -----CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          210 -----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       210 -----~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                           ....||+.|||||++.+..++.++|||||||++|||++|++||.....
T Consensus       209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~  261 (336)
T 4g3f_A          209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR  261 (336)
T ss_dssp             -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCC
T ss_pred             ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH
Confidence                 224689999999999999999999999999999999999999976543

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=1.4e-52  Score=347.49  Aligned_cols=198  Identities=19%  Similarity=0.218  Sum_probs=170.2

Q ss_pred             ccccccccCCCCCCCeEEEEEeC----CCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      ++|++++.||+|+||+||+++..    .++.||+|++++...  .....+.+|++++++++||||+++++++.+++.++|
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            45899999999999999999852    478999999975421  223467889999999999999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC--
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--  208 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~--  208 (264)
                      ||||+++|+|.+++..  ...+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++....  
T Consensus       104 vmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~  180 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSL-GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE  180 (304)
T ss_dssp             EECCCTTCEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred             EEEcCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence            9999999999999973  45799999999999999999999999 999999999999999999999999999986432  


Q ss_pred             --CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          209 --GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       209 --~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                        .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+...
T Consensus       181 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~  231 (304)
T 3ubd_A          181 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR  231 (304)
T ss_dssp             CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH
Confidence              2345799999999999999999999999999999999999999986543

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=4.7e-51  Score=336.75  Aligned_cols=192  Identities=19%  Similarity=0.255  Sum_probs=166.9

Q ss_pred             cccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEe----CCcceEEE
Q 024659           60 NIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLLVA  132 (264)
Q Consensus        60 ~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~  132 (264)
                      ++.++||+|+||+||+|.+ .++..||+|.+....  ....+.+.+|++++++++||||+++++++.+    .+.++|||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            4555789999999999995 568899999997542  2335678999999999999999999999875    24579999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC--ceeeccCCCCeeeC-CCCCeEEcccCCCcccCCC
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~--i~H~dl~~~Nil~~-~~~~~kl~dfg~~~~~~~~  209 (264)
                      ||+++|+|.+++.+  ...+++..+..++.||+.||.|||++ +  |+||||||+|||++ .++.+||+|||+|+.....
T Consensus       109 Ey~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~  185 (290)
T 3fpq_A          109 ELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS  185 (290)
T ss_dssp             ECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred             eCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC
Confidence            99999999999973  45799999999999999999999998 7  99999999999998 4799999999999865433


Q ss_pred             --CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                        ....||+.|||||++.+ .++.++|||||||++|||+||+.||...
T Consensus       186 ~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~  232 (290)
T 3fpq_A          186 FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSEC  232 (290)
T ss_dssp             SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence              34578999999999864 6999999999999999999999999754

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.9e-49  Score=329.47  Aligned_cols=194  Identities=19%  Similarity=0.264  Sum_probs=160.4

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCC--------
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGD--------  126 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--------  126 (264)
                      ++|++++.||+|+||+||+|++ .+++.||+|+++..... ..+.+.+|++++++++||||+++++++.+.+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            3578899999999999999995 56899999999765433 3456889999999999999999999987644        


Q ss_pred             ----cceEEEecCCCCCHHHhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccC
Q 024659          127 ----ERLLVAEYMPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG  201 (264)
Q Consensus       127 ----~~~lv~e~~~~~sL~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg  201 (264)
                          .+++||||+.+|+|.+++..... ...++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~-~IiHRDlKp~NILl~~~~~vKl~DFG  163 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK-GLMHRDLKPSNIFFTMDDVVKVGDFG  163 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCCC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC-cCccccCcHHHeEECCCCcEEEccCc
Confidence                26899999999999999974322 2356677899999999999999999 99999999999999999999999999


Q ss_pred             CCcccCCC----------------CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          202 LMKNSRDG----------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       202 ~~~~~~~~----------------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      +++.....                ....||+.|||||++.+..|+.++|||||||++|||++   ||..
T Consensus       164 la~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~  229 (299)
T 4g31_A          164 LVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFST  229 (299)
T ss_dssp             CC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred             cceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCC
Confidence            99865432                12368999999999999999999999999999999996   6654

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=4.1e-49  Score=333.95  Aligned_cols=203  Identities=20%  Similarity=0.273  Sum_probs=175.0

Q ss_pred             hCCCccccccccCCCCCCCeEEEEEeCC------CCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCC-CCccccceeeEe
Q 024659           53 TSGFAMENIVSEHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRN-RRLANLLGCCCE  124 (264)
Q Consensus        53 ~~~~~~~~~l~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~  124 (264)
                      .-..+.+++.++||+|+||+||+|.+.+      ++.||+|.+...... ..+.+.+|+++|.++.| |||++++++|..
T Consensus        60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~  139 (353)
T 4ase_A           60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK  139 (353)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred             EecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe
Confidence            4556778999999999999999998532      368999999876533 34568999999999975 899999999976


Q ss_pred             C-CcceEEEecCCCCCHHHhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeee
Q 024659          125 G-DERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF  189 (264)
Q Consensus       125 ~-~~~~lv~e~~~~~sL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~  189 (264)
                      . +.++|||||+++|+|.++++...              ...+++..+..++.||+.||.|||++ +++||||||+|||+
T Consensus       140 ~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~-~iiHRDLK~~NILl  218 (353)
T 4ase_A          140 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILL  218 (353)
T ss_dssp             TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEE
T ss_pred             cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC-CeecCccCccceee
Confidence            4 56899999999999999996421              24588999999999999999999999 99999999999999


Q ss_pred             CCCCCeEEcccCCCcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          190 DDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       190 ~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ++++.+||+|||+++......      ...+|+.|||||++.+..++.++|||||||++|||+| |+.||....
T Consensus       219 ~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~  292 (353)
T 4ase_A          219 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK  292 (353)
T ss_dssp             CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             CCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC
Confidence            999999999999998654332      2356889999999999999999999999999999998 899997643

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=4e-48  Score=333.05  Aligned_cols=196  Identities=15%  Similarity=0.269  Sum_probs=171.1

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeC------Cc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG------DE  127 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~  127 (264)
                      +.|++++.||+|+||+||+|++ .+|+.||+|+++....  ...+.+.+|+++|++++||||+++++++...      +.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            4589999999999999999995 5689999999976532  3345688999999999999999999987643      56


Q ss_pred             ceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      +||||||+. |+|.+++.  ..+.+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++...
T Consensus       134 ~~ivmE~~~-g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~-~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~  209 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSA-QVIHRDLKPSNLLVNENCELKIGDFGMARGLC  209 (398)
T ss_dssp             EEEEEECCS-EEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred             EEEEEeCCC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-cCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence            899999996 57999986  456899999999999999999999999 99999999999999999999999999997543


Q ss_pred             C--------CCcccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          208 D--------GRSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       208 ~--------~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .        .....||+.|+|||++.+.. ++.++||||+||++|||++|++||.+..
T Consensus       210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~  267 (398)
T 4b99_A          210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN  267 (398)
T ss_dssp             ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS
T ss_pred             cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC
Confidence            2        23457899999999988764 7999999999999999999999998654

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=1.3e-48  Score=325.69  Aligned_cols=191  Identities=16%  Similarity=0.181  Sum_probs=157.8

Q ss_pred             cccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCC----cceEEEe
Q 024659           58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD----ERLLVAE  133 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e  133 (264)
                      ++.+.++||+|+||+||+|++. |+.||||+++.... .......|+..+.+++||||+++++++..++    .++||||
T Consensus         4 ~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E   81 (303)
T 3hmm_A            4 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD   81 (303)
T ss_dssp             GEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence            3566678999999999999984 67999999975431 1122334666667889999999999998754    4799999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC-------CCceeeccCCCCeeeCCCCCeEEcccCCCccc
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-------ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~-------~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~  206 (264)
                      |+++|+|.++++.   ..+++..+..++.|++.||.|||++       .+|+||||||+|||++.++.+||+|||+++..
T Consensus        82 y~~~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~  158 (303)
T 3hmm_A           82 YHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH  158 (303)
T ss_dssp             CCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred             CCCCCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence            9999999999963   4689999999999999999999964       28999999999999999999999999999765


Q ss_pred             CCC--------CcccccccccccccccCC------CCCCccceechHHHHHHHHhCCCCCC
Q 024659          207 RDG--------RSYSTNLAFTPPEYLRTG------RVTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       207 ~~~--------~~~~~~~~y~aPE~~~~~------~~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                      ...        ....||+.|+|||++.+.      .++.++|||||||++|||+||.+||.
T Consensus       159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~  219 (303)
T 3hmm_A          159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG  219 (303)
T ss_dssp             ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTT
T ss_pred             cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCC
Confidence            332        224689999999999764      36789999999999999999987764

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=2.8e-47  Score=324.34  Aligned_cols=193  Identities=18%  Similarity=0.248  Sum_probs=169.0

Q ss_pred             ccccccccCCCCCCCeEEEEEeC----CCCEEEEEEeCCCCChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      +.|+++++||+|+||+||+|+..    .++.||+|.+....  ...++.+|+++|+.+ .||||+++++++.+.++.++|
T Consensus        21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lv   98 (361)
T 4f9c_A           21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIA   98 (361)
T ss_dssp             GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEE
T ss_pred             CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEE
Confidence            44889999999999999999852    46789999997654  345678999999998 699999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC-CCeEEcccCCCcccCCC-
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~-~~~kl~dfg~~~~~~~~-  209 (264)
                      |||+++++|.+++.     .+++..++.++.||+.||.|||++ ||+||||||+|||++.+ +.+||+|||+|+..... 
T Consensus        99 mE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~-gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~  172 (361)
T 4f9c_A           99 MPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQF-GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTK  172 (361)
T ss_dssp             EECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCS
T ss_pred             EeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC-CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcc
Confidence            99999999999984     489999999999999999999999 99999999999999876 89999999999754321 


Q ss_pred             -------------------------------CcccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          210 -------------------------------RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       210 -------------------------------~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                                                     ....||+.|+|||++.+.. ++.++||||+||++|||++|+.||....+
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~  252 (361)
T 4f9c_A          173 IELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASD  252 (361)
T ss_dssp             CGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSS
T ss_pred             ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCC
Confidence                                           1236899999999998764 89999999999999999999999975544

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=3.1e-47  Score=341.92  Aligned_cols=198  Identities=18%  Similarity=0.139  Sum_probs=172.7

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC------ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcc
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA------WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  128 (264)
                      .++|++++.||+|+||.||+++. .+|+.||+|++.+..      .........++.+++.++||||+++++++.+.+.+
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l  267 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL  267 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence            47799999999999999999995 568999999996421      11122234456778888999999999999999999


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      ||||||++||+|.+++..  ...+++..++.++.||+.||.|||++ ||+||||||+|||++.+|.+||+|||+|+....
T Consensus       268 ylVmEy~~GGdL~~~l~~--~~~l~E~~a~~y~~qIl~aL~yLH~~-gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~  344 (689)
T 3v5w_A          268 SFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSK  344 (689)
T ss_dssp             EEEECCCCSCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             EEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence            999999999999999973  45799999999999999999999999 999999999999999999999999999986544


Q ss_pred             C--CcccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 G--RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 ~--~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .  ....||+.|+|||++.+ ..|+.++|||||||++|||++|.+||....
T Consensus       345 ~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~  395 (689)
T 3v5w_A          345 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK  395 (689)
T ss_dssp             CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGG
T ss_pred             CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            3  45689999999999975 569999999999999999999999997543

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=7.7e-47  Score=339.39  Aligned_cols=199  Identities=21%  Similarity=0.196  Sum_probs=180.0

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      +.|++++.||+|+||.||++.. .+|+.||+|.+........+.+.+|+++|+.++||||+++++++.+.+.++|||||+
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~  236 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  236 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence            5688999999999999999995 568999999998776666677899999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC--CCeEEcccCCCcccCCCC---
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD--VNPRLSCFGLMKNSRDGR---  210 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~--~~~kl~dfg~~~~~~~~~---  210 (264)
                      .+|+|.+++.. ....+++..+..++.||+.||.|||++ +|+||||||+|||++.+  +.+||+|||+++......   
T Consensus       237 ~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~-~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~  314 (573)
T 3uto_A          237 SGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK  314 (573)
T ss_dssp             CCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEE
T ss_pred             CCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCChhhccccCCCCCCEEEeeccceeEccCCCcee
Confidence            99999999864 345789999999999999999999999 99999999999999854  899999999998765543   


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                      ...||+.|+|||++.+..|+.++|||||||++|||++|.+||.....
T Consensus       315 ~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~  361 (573)
T 3uto_A          315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND  361 (573)
T ss_dssp             EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH
T ss_pred             eeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH
Confidence            34789999999999999999999999999999999999999986543

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=1.3e-43  Score=295.06  Aligned_cols=197  Identities=18%  Similarity=0.268  Sum_probs=177.4

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      ...|++++.||+|+||.||++.+ .+++.||+|.+........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            35688999999999999999994 66899999999766555567789999999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----C
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R  210 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~  210 (264)
                      +++++|.+++..   ..+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++......    .
T Consensus        99 ~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  174 (297)
T 3fxz_A           99 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS  174 (297)
T ss_dssp             CTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred             CCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC-CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccC
Confidence            999999999964   3589999999999999999999999 9999999999999999999999999998765432    2


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ...+|+.|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus       175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  220 (297)
T 3fxz_A          175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN  220 (297)
T ss_dssp             CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            3468899999999999999999999999999999999999997543

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=2.6e-43  Score=298.06  Aligned_cols=199  Identities=18%  Similarity=0.217  Sum_probs=176.2

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCC---CChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      .++|++++.||+|+||.||++.. .+++.||+|.+++.   .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   83 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence            45688999999999999999995 46899999999753   223356688999999999999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC---
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---  208 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~---  208 (264)
                      |||+++++|.+++..  ...+++..++.++.||+.||.|||++ |++||||||+||+++.++.+||+|||+++....   
T Consensus        84 ~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~  160 (337)
T 1o6l_A           84 MEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA  160 (337)
T ss_dssp             EECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred             EeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence            999999999998863  45689999999999999999999999 999999999999999999999999999975322   


Q ss_pred             -CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          209 -GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       209 -~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                       .....+|+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus       161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  210 (337)
T 1o6l_A          161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH  210 (337)
T ss_dssp             CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH
Confidence             2345689999999999998999999999999999999999999976543

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=1.5e-42  Score=290.19  Aligned_cols=198  Identities=19%  Similarity=0.269  Sum_probs=177.4

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      +.|.+.+.||+|+||.||++.+ .+++.||+|.+........+.+.+|++++++++||||+++++++.+....++||||+
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   89 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI   89 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence            4577888899999999999996 468899999998766666778999999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC-----
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----  210 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-----  210 (264)
                      ++++|.+++.. ....+++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++.......     
T Consensus        90 ~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  167 (310)
T 3s95_A           90 KGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGMAYLHSM-NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG  167 (310)
T ss_dssp             TTCBHHHHHHH-CCTTSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEEECTTSCEEECCCTTCEECC--------
T ss_pred             CCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCcCeEEECCCCCEEEeecccceecccccccccc
Confidence            99999999975 356799999999999999999999999 99999999999999999999999999997643221     


Q ss_pred             -------------cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 -------------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 -------------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                                   ...+|+.|+|||++.+..++.++||||||+++|||++|..|+....
T Consensus       168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~  226 (310)
T 3s95_A          168 LRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYL  226 (310)
T ss_dssp             ------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTS
T ss_pred             cccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchh
Confidence                         3467899999999999999999999999999999999999887543

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=5.5e-43  Score=293.90  Aligned_cols=198  Identities=19%  Similarity=0.232  Sum_probs=176.7

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      .++|++++.||+|+||.||++.. .+++.||+|.+....   ....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv   84 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   84 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence            45688999999999999999995 468999999997532   12345678899999999999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-C
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-R  210 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-~  210 (264)
                      |||+++++|.+++..  ...+++..+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||+++..... .
T Consensus        85 ~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~  161 (318)
T 1fot_A           85 MDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSK-DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY  161 (318)
T ss_dssp             ECCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred             EeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChheEEEcCCCCEEEeecCcceecCCccc
Confidence            999999999999973  45689999999999999999999999 9999999999999999999999999999865443 3


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ...+|+.|+|||++.+..++.++|+||||+++|||++|+.||....
T Consensus       162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  207 (318)
T 1fot_A          162 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN  207 (318)
T ss_dssp             CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC
Confidence            4578999999999999899999999999999999999999997654

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=3.1e-43  Score=296.65  Aligned_cols=200  Identities=20%  Similarity=0.297  Sum_probs=177.1

Q ss_pred             CCCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCC--CChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      .....|++++.||+|+||.||++.+ .+++.||+|++...  .....+.+.+|+++++.++||||+++++++...+..++
T Consensus        12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l   91 (328)
T 3fe3_A           12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL   91 (328)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence            3456789999999999999999996 67899999999754  22345678899999999999999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-  209 (264)
                      ||||+++++|.+++..  ...+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++...... 
T Consensus        92 v~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  168 (328)
T 3fe3_A           92 IMEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG  168 (328)
T ss_dssp             EECCCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC
T ss_pred             EEECCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC
Confidence            9999999999999863  35699999999999999999999999 9999999999999999999999999999765433 


Q ss_pred             --CcccccccccccccccCCCCC-CccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 --RSYSTNLAFTPPEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~~~~~~~-~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                        ....+|+.|+|||++.+..++ +++|||||||++|+|++|+.||....
T Consensus       169 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  218 (328)
T 3fe3_A          169 KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN  218 (328)
T ss_dssp             GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC
Confidence              334689999999999988865 79999999999999999999997654

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=2.3e-42  Score=290.55  Aligned_cols=211  Identities=15%  Similarity=0.219  Sum_probs=184.6

Q ss_pred             cccCHHHHHHHhCCCc-------cccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCC
Q 024659           42 CEYSIETLRTATSGFA-------MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNR  113 (264)
Q Consensus        42 ~~~~~~~~~~~~~~~~-------~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~  113 (264)
                      ..++.+++..+++...       .+...+.||+|+||.||+|.+. +++.||+|++........+.+.+|+.++++++|+
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~  102 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF  102 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence            3468888888776532       1455667899999999999965 6899999999876656677889999999999999


Q ss_pred             CccccceeeEeCCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC
Q 024659          114 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV  193 (264)
Q Consensus       114 ~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~  193 (264)
                      ||+++++++...+..++||||+++++|.+++.   ...+++..+..++.|++.||.|||+. +++||||||+||+++.++
T Consensus       103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~---~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~  178 (321)
T 2c30_A          103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVS---QVRLNEEQIATVCEAVLQALAYLHAQ-GVIHRDIKSDSILLTLDG  178 (321)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCCSCBHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTC
T ss_pred             CcceEEEEEEECCEEEEEEecCCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCC
Confidence            99999999999999999999999999999984   35699999999999999999999999 999999999999999999


Q ss_pred             CeEEcccCCCcccCCC----CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          194 NPRLSCFGLMKNSRDG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       194 ~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .+||+|||++......    ....+|+.|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus       179 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~  245 (321)
T 2c30_A          179 RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS  245 (321)
T ss_dssp             CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             cEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999998765432    34468899999999998889999999999999999999999997543

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=1.7e-43  Score=306.14  Aligned_cols=204  Identities=17%  Similarity=0.167  Sum_probs=177.3

Q ss_pred             HHHHhCCCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEe
Q 024659           49 LRTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCE  124 (264)
Q Consensus        49 ~~~~~~~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~  124 (264)
                      +.......+.|++++.||+|+||.||++++ .+++.||+|++.+..   ......+.+|+.+++.++||||+++++++.+
T Consensus        61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~  140 (410)
T 3v8s_A           61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  140 (410)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence            344455567889999999999999999995 458899999986421   1122347789999999999999999999999


Q ss_pred             CCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCc
Q 024659          125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (264)
Q Consensus       125 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~  204 (264)
                      ....++||||+++++|.+++..   ..+++..+..++.||+.||.|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus       141 ~~~~~lV~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~-givHrDLKp~NILl~~~g~ikL~DFG~a~  216 (410)
T 3v8s_A          141 DRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDKSGHLKLADFGTCM  216 (410)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             CCEEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeeECCCCCEEEeccceeE
Confidence            9999999999999999999863   3589999999999999999999999 99999999999999999999999999997


Q ss_pred             ccCCC-----CcccccccccccccccCCC----CCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          205 NSRDG-----RSYSTNLAFTPPEYLRTGR----VTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       205 ~~~~~-----~~~~~~~~y~aPE~~~~~~----~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .....     ....+|+.|+|||++.+..    ++.++|||||||++|||++|++||....
T Consensus       217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~  277 (410)
T 3v8s_A          217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS  277 (410)
T ss_dssp             ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC
Confidence            65443     2457899999999998665    7899999999999999999999998654

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=1.4e-42  Score=297.96  Aligned_cols=198  Identities=17%  Similarity=0.228  Sum_probs=175.4

Q ss_pred             CCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      +++.|++++.||+|+||.||++.. .+++.||+|.+....   ....+.+.+|+++++.++||||+++++++.+....++
T Consensus        13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l   92 (384)
T 4fr4_A           13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM   92 (384)
T ss_dssp             CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            467789999999999999999995 458899999987432   2234678899999999999999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-  209 (264)
                      ||||+.+++|.+++.  ....+++..+..++.||+.||.|||++ |++||||||+||+++.++.+||+|||++...... 
T Consensus        93 v~e~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~  169 (384)
T 4fr4_A           93 VVDLLLGGDLRYHLQ--QNVHFKEETVKLFICELVMALDYLQNQ-RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET  169 (384)
T ss_dssp             EECCCTTEEHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred             EEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence            999999999999997  455799999999999999999999999 9999999999999999999999999999865433 


Q ss_pred             --CcccccccccccccccC---CCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 --RSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~~~---~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                        ....+|+.|+|||++..   ..++.++|||||||++|||++|+.||...
T Consensus       170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~  220 (384)
T 4fr4_A          170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIR  220 (384)
T ss_dssp             CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred             ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCC
Confidence              34578999999999974   35899999999999999999999999743

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=4.6e-43  Score=305.65  Aligned_cols=201  Identities=19%  Similarity=0.171  Sum_probs=174.7

Q ss_pred             CCCccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCC---hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcce
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  129 (264)
                      ...++|++++.||+|+||+||++++. +++.||+|++.+...   .....+.+|..++..++||||+++++++.+.+..+
T Consensus        71 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~  150 (437)
T 4aw2_A           71 LHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLY  150 (437)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEE
T ss_pred             CChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEE
Confidence            34567889999999999999999965 578999999974211   11233788999999999999999999999999999


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~  209 (264)
                      +||||+++++|.+++.. ....+++..++.++.||+.||.|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus       151 lV~Ey~~gg~L~~~l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~-giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~  228 (437)
T 4aw2_A          151 LVMDYYVGGDLLTLLSK-FEDRLPEEMARFYLAEMVIAIDSVHQL-HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED  228 (437)
T ss_dssp             EEECCCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             EEEecCCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHHhC-CeEecccCHHHeeEcCCCCEEEcchhhhhhcccC
Confidence            99999999999999964 346799999999999999999999999 9999999999999999999999999999765433


Q ss_pred             C-----ccccccccccccccc-----CCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 R-----SYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ~-----~~~~~~~y~aPE~~~-----~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .     ...||+.|+|||++.     ...++.++|||||||++|||++|+.||....
T Consensus       229 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~  285 (437)
T 4aw2_A          229 GTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES  285 (437)
T ss_dssp             SCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             CCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC
Confidence            2     247899999999997     4568999999999999999999999997654

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=2.3e-42  Score=294.79  Aligned_cols=197  Identities=19%  Similarity=0.225  Sum_probs=175.5

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh------hHHHHHHHHHHHhcCCCCCccccceeeEeCCcce
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  129 (264)
                      +.|++++.||+|+||.||++.. .+++.||+|.+......      ..+.+.+|+.++++++||||+++++++.+....+
T Consensus        12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~   91 (361)
T 2yab_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVV   91 (361)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEE
Confidence            3478889999999999999995 46889999999765322      2467889999999999999999999999999999


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC----CeEEcccCCCcc
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKN  205 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~----~~kl~dfg~~~~  205 (264)
                      +||||+++++|.+++.  ....+++..+..++.||+.||.|||+. |++||||||+||+++.++    .+||+|||++..
T Consensus        92 lv~e~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~  168 (361)
T 2yab_A           92 LILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE  168 (361)
T ss_dssp             EEEECCCSCBHHHHHT--TCSCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred             EEEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence            9999999999999996  445799999999999999999999999 999999999999998776    799999999986


Q ss_pred             cCCC---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          206 SRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       206 ~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ....   ....+|+.|+|||++.+..++.++||||||+++|+|++|.+||....
T Consensus       169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~  222 (361)
T 2yab_A          169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT  222 (361)
T ss_dssp             CCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred             cCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence            5443   34568999999999998889999999999999999999999997654

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=2.5e-43  Score=300.00  Aligned_cols=199  Identities=20%  Similarity=0.266  Sum_probs=172.7

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l  130 (264)
                      .+.|++++.||+|+||.||++++ .+++.||+|++.+..   ....+.+.+|.+++..+ +||||+++++++.+.+..++
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            46688999999999999999995 468999999997531   12345678899999988 69999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC--
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--  208 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~--  208 (264)
                      ||||+++++|.+++..  ...+++..++.++.||+.||.|||++ +++||||||+||+++.++.+||+|||+++....  
T Consensus       102 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~  178 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLHDK-GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG  178 (353)
T ss_dssp             EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred             EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCHHHEEECCCCCEEEccccceeecccCC
Confidence            9999999999999863  45699999999999999999999999 999999999999999999999999999885332  


Q ss_pred             --CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          209 --GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       209 --~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                        .....+|+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus       179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~  229 (353)
T 3txo_A          179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE  229 (353)
T ss_dssp             -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH
Confidence              2345689999999999988899999999999999999999999976543

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=4.6e-42  Score=288.63  Aligned_cols=198  Identities=27%  Similarity=0.492  Sum_probs=176.2

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      ..|++.+.||+|+||.||++.+.+++.||+|++........+.+.+|++++++++||||+++++++...+..++||||++
T Consensus        39 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  118 (321)
T 2qkw_B           39 NNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYME  118 (321)
T ss_dssp             CCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCT
T ss_pred             hccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCC
Confidence            44567777899999999999988889999999988776667789999999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-----
Q 024659          137 NDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----  209 (264)
Q Consensus       137 ~~sL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-----  209 (264)
                      +++|.+++....  ...+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++......     
T Consensus       119 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  197 (321)
T 2qkw_B          119 NGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR-AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHL  197 (321)
T ss_dssp             TCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCC
T ss_pred             CCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC-CeecCCCCHHHEEECCCCCEEEeeccccccccccccccc
Confidence            999999986432  23589999999999999999999999 9999999999999999999999999998754321     


Q ss_pred             -CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 -~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                       ....+++.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus       198 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~  244 (321)
T 2qkw_B          198 STVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQS  244 (321)
T ss_dssp             BCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCS
T ss_pred             ccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCccccc
Confidence             2234789999999999888999999999999999999999998654

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=6e-43  Score=301.32  Aligned_cols=197  Identities=17%  Similarity=0.254  Sum_probs=173.1

Q ss_pred             CCCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcc
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDER  128 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~  128 (264)
                      -...+|++++.||+|+||.||+++. .+++.||+|++++..   ....+.+.+|..++.++ +||||+++++++.+.+..
T Consensus        49 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~  128 (396)
T 4dc2_A           49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL  128 (396)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             CChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEE
Confidence            3456789999999999999999995 458899999997542   22234577899999887 899999999999999999


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      ++||||+++++|..++..  ...+++..++.++.||+.||.|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus       129 ~lV~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDLKp~NILl~~~g~ikL~DFGla~~~~~  205 (396)
T 4dc2_A          129 FFVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR  205 (396)
T ss_dssp             EEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             EEEEEcCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence            999999999999998863  45699999999999999999999999 999999999999999999999999999975322


Q ss_pred             ----CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCC
Q 024659          209 ----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       209 ----~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                          .....+|+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus       206 ~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~  254 (396)
T 4dc2_A          206 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD  254 (396)
T ss_dssp             TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSST
T ss_pred             CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCc
Confidence                234578999999999999999999999999999999999999995

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3e-42  Score=289.86  Aligned_cols=199  Identities=17%  Similarity=0.203  Sum_probs=176.8

Q ss_pred             CccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      .+.|.+++.||+|+||.||++.+. +++.+|+|.+.... .....+.+|+++++.++||||+++++++.+.+..++||||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            456889999999999999999954 58899999997654 4456688999999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC--CCCeEEcccCCCcccCCCC--
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD--DVNPRLSCFGLMKNSRDGR--  210 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~--~~~~kl~dfg~~~~~~~~~--  210 (264)
                      +++++|.+++.. ....+++..+..++.|++.||.|||++ |++||||||+||+++.  ++.+||+|||++.......  
T Consensus        83 ~~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~  160 (321)
T 1tki_A           83 ISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSH-NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF  160 (321)
T ss_dssp             CCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred             CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc
Confidence            999999999853 345789999999999999999999999 9999999999999987  7899999999998765443  


Q ss_pred             -cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       211 -~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                       ...+++.|+|||++.+..++.++||||||+++|+|++|..||.....
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  208 (321)
T 1tki_A          161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN  208 (321)
T ss_dssp             EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred             ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH
Confidence             24578999999999988899999999999999999999999976543

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=1.3e-42  Score=294.56  Aligned_cols=200  Identities=19%  Similarity=0.253  Sum_probs=175.0

Q ss_pred             CCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcce
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~  129 (264)
                      ..++|++++.||+|+||.||+++. .+++.||+|.++...   ....+.+..|..++..+ +||||+++++++.+.+..+
T Consensus        15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~   94 (345)
T 1xjd_A           15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF   94 (345)
T ss_dssp             -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence            346688889999999999999996 468899999997532   22345677889998876 8999999999999999999


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC-
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-  208 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~-  208 (264)
                      +||||+++++|.+++..  ...+++..+..++.||+.||.|||++ |++||||||+||+++.++.+||+|||+++.... 
T Consensus        95 lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  171 (345)
T 1xjd_A           95 FVMEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSK-GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG  171 (345)
T ss_dssp             EEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred             EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence            99999999999999863  34689999999999999999999999 999999999999999999999999999975422 


Q ss_pred             ---CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          209 ---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       209 ---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                         .....+|+.|+|||++.+..++.++|+||||+++|||++|..||.....
T Consensus       172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  223 (345)
T 1xjd_A          172 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE  223 (345)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH
Confidence               2345789999999999998999999999999999999999999976543

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.1e-42  Score=301.26  Aligned_cols=205  Identities=19%  Similarity=0.149  Sum_probs=177.1

Q ss_pred             HHhCCCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC---hhHHHHHHHHHHHhcCCCCCccccceeeEeCC
Q 024659           51 TATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGD  126 (264)
Q Consensus        51 ~~~~~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~  126 (264)
                      ......+.|++++.||+|+||.||+++. .+++.||+|++++...   ...+.+.+|..++..++|+||+++++++.+.+
T Consensus        55 ~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~  134 (412)
T 2vd5_A           55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDEN  134 (412)
T ss_dssp             HHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred             hccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC
Confidence            3344567788999999999999999996 5689999999975321   12234788999999999999999999999999


Q ss_pred             cceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCccc
Q 024659          127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (264)
Q Consensus       127 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~  206 (264)
                      ..++||||+++++|.+++.. .+..+++..++.++.||+.||.|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus       135 ~~~lVmE~~~gg~L~~~l~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~-giiHrDLKp~NILld~~g~vkL~DFGla~~~  212 (412)
T 2vd5_A          135 YLYLVMEYYVGGDLLTLLSK-FGERIPAEMARFYLAEIVMAIDSVHRL-GYVHRDIKPDNILLDRCGHIRLADFGSCLKL  212 (412)
T ss_dssp             EEEEEECCCCSCBHHHHHHH-HSSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEEcCCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccCHHHeeecCCCCEEEeechhheec
Confidence            99999999999999999964 234799999999999999999999999 9999999999999999999999999999765


Q ss_pred             CCCC-----ccccccccccccccc-------CCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          207 RDGR-----SYSTNLAFTPPEYLR-------TGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       207 ~~~~-----~~~~~~~y~aPE~~~-------~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                      ....     ...+|+.|+|||++.       ...++.++|||||||++|||++|+.||.....
T Consensus       213 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~  275 (412)
T 2vd5_A          213 RADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST  275 (412)
T ss_dssp             CTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred             cCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH
Confidence            4332     347899999999997       34589999999999999999999999976543

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=3e-42  Score=286.47  Aligned_cols=197  Identities=18%  Similarity=0.273  Sum_probs=171.4

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      ..|++++.||+|+||.||++.+ .++..||+|.+....   ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   90 (294)
T 4eqm_A           11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM   90 (294)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence            4588999999999999999995 468899999986432   223457889999999999999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---  209 (264)
                      ||+++++|.+++..  ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++......   
T Consensus        91 e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  167 (294)
T 4eqm_A           91 EYIEGPTLSEYIES--HGPLSVDTAINFTNQILDGIKHAHDM-RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT  167 (294)
T ss_dssp             ECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCSSSTTC------
T ss_pred             eCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEEeCCCcccccccccc
Confidence            99999999999963  35789999999999999999999999 9999999999999999999999999999765432   


Q ss_pred             --CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                        ....+|+.|+|||.+.+..++.++||||||+++|+|++|+.||....
T Consensus       168 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~  216 (294)
T 4eqm_A          168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET  216 (294)
T ss_dssp             -------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC
T ss_pred             ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence              23457899999999999899999999999999999999999997654

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.7e-42  Score=294.11  Aligned_cols=196  Identities=17%  Similarity=0.246  Sum_probs=173.9

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l  130 (264)
                      ..+|++++.||+|+||.||++++ .+++.||+|++....   ....+.+.+|..++.++ +||||+++++++.+.+..++
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   87 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF   87 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence            45688999999999999999995 458899999997542   23345678899999988 89999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC--
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--  208 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~--  208 (264)
                      ||||+++++|.+++..  ...+++..++.++.||+.||.|||++ +++||||||+||+++.++.+||+|||+++....  
T Consensus        88 v~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~  164 (345)
T 3a8x_A           88 VIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG  164 (345)
T ss_dssp             EECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred             EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence            9999999999999863  35699999999999999999999999 999999999999999999999999999975322  


Q ss_pred             --CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          209 --GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       209 --~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                        .....+|+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus       165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  212 (345)
T 3a8x_A          165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI  212 (345)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence              2345789999999999998999999999999999999999999964

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=1.9e-42  Score=294.30  Aligned_cols=199  Identities=17%  Similarity=0.177  Sum_probs=177.6

Q ss_pred             CCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      ..+.|++++.||+|+||.||++.. .+++.||+|++....   ....+.+.+|+++++.++||||+++++++.+....++
T Consensus        39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l  118 (350)
T 1rdq_E           39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM  118 (350)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence            356789999999999999999995 468999999997532   1234668899999999999999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-  209 (264)
                      ||||+++++|.+++..  ...+++..++.++.||+.||.|||++ |++||||||+||+++.++.+||+|||+++..... 
T Consensus       119 v~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~  195 (350)
T 1rdq_E          119 VMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSL-DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT  195 (350)
T ss_dssp             EEECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB
T ss_pred             EEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCccceEEECCCCCEEEcccccceeccCCc
Confidence            9999999999999974  34689999999999999999999999 9999999999999999999999999999865443 


Q ss_pred             CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ....+|+.|+|||++.+..++.++||||||+++|||++|..||....
T Consensus       196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~  242 (350)
T 1rdq_E          196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ  242 (350)
T ss_dssp             CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC
Confidence            34578999999999999899999999999999999999999997654

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=7.1e-42  Score=286.39  Aligned_cols=200  Identities=20%  Similarity=0.251  Sum_probs=172.7

Q ss_pred             CCCccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCCh--hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      .-.+.|++++.||+|+||.||++.+.+++.||+|++......  ....+.+|++++++++||||+++++++.+.+..++|
T Consensus        18 ~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   97 (311)
T 3niz_A           18 GLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLV   97 (311)
T ss_dssp             CSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEE
T ss_pred             chHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEE
Confidence            345779999999999999999999888999999999754322  245688999999999999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--  209 (264)
                      |||+++ +|.+.+.. ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++......  
T Consensus        98 ~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~  174 (311)
T 3niz_A           98 FEFMEK-DLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQH-RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR  174 (311)
T ss_dssp             EECCSE-EHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC
T ss_pred             EcCCCC-CHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCchHhEEECCCCCEEEccCcCceecCCCcc
Confidence            999975 78888764 445689999999999999999999999 9999999999999999999999999999865422  


Q ss_pred             --CcccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 --RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                        ....+|+.|+|||++.+ ..++.++||||||+++|+|++|+.||....
T Consensus       175 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  224 (311)
T 3niz_A          175 SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT  224 (311)
T ss_dssp             ---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCC
Confidence              23467899999999976 458999999999999999999999997544

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=1.7e-42  Score=294.71  Aligned_cols=200  Identities=20%  Similarity=0.246  Sum_probs=175.5

Q ss_pred             CCccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcce
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~  129 (264)
                      ..++|++++.||+|+||.||++... +++.||+|++....   ....+.+..|..++..+ +||+|+++++++.+.+..+
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   97 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY   97 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence            3566889999999999999999965 47899999997532   22345678899999988 7999999999999999999


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC-
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-  208 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~-  208 (264)
                      +||||+++++|.+++..  ...+++..++.++.||+.||.|||++ |++||||||+||+++.++.+||+|||+++.... 
T Consensus        98 lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  174 (353)
T 2i0e_A           98 FVMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD  174 (353)
T ss_dssp             EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred             EEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence            99999999999999863  34699999999999999999999999 999999999999999999999999999985322 


Q ss_pred             ---CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          209 ---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       209 ---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                         .....+|+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus       175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~  226 (353)
T 2i0e_A          175 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE  226 (353)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH
Confidence               2345789999999999998999999999999999999999999976543

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=6.8e-42  Score=286.26  Aligned_cols=201  Identities=20%  Similarity=0.307  Sum_probs=169.0

Q ss_pred             CCCccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      -.+..|++++.||+|+||.||++.+ .+..||+|.+.....  ...+.+.+|++++++++||||+++++++......++|
T Consensus        34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  112 (309)
T 3p86_A           34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV  112 (309)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred             CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence            4467788999999999999999987 466899999986542  2345788999999999999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCC--ceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          132 AEYMPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lh~~~~--i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      |||+++++|.+++.... ...+++..++.++.|++.||.|||+. +  ++||||||+||+++.++.+||+|||+++....
T Consensus       113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~  191 (309)
T 3p86_A          113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS  191 (309)
T ss_dssp             EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS-SSCCCCTTCCGGGEEECTTCCEEECCCC-------
T ss_pred             EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCCEECCCCChhhEEEeCCCcEEECCCCCCccccc
Confidence            99999999999996422 12389999999999999999999999 9  99999999999999999999999999875433


Q ss_pred             C----CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 G----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 ~----~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .    ....+|+.|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus       192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~  243 (309)
T 3p86_A          192 TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN  243 (309)
T ss_dssp             ----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC
T ss_pred             cccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            2    34567899999999999999999999999999999999999997543

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=5.6e-42  Score=292.73  Aligned_cols=197  Identities=19%  Similarity=0.248  Sum_probs=174.3

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      +.|++++.||+|+||.||++.. .+++.||+|.+.....  ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e  108 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD  108 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            3488889999999999999995 4688999999976532  334678899999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC---CCeEEcccCCCcccCCCC
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMKNSRDGR  210 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~---~~~kl~dfg~~~~~~~~~  210 (264)
                      |+.+++|.+.+.  ....+++..+..++.||+.||.|||++ +++||||||+||+++.+   +.+||+|||++.......
T Consensus       109 ~~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~  185 (362)
T 2bdw_A          109 LVTGGELFEDIV--AREFYSEADASHCIQQILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE  185 (362)
T ss_dssp             CCCSCBHHHHHT--TCSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC
T ss_pred             cCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc
Confidence            999999999886  345789999999999999999999999 99999999999999864   459999999998655432


Q ss_pred             ---cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 ---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 ---~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                         ...+|+.|+|||++.+..++.++|||||||++|+|++|.+||....
T Consensus       186 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~  234 (362)
T 2bdw_A          186 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED  234 (362)
T ss_dssp             SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence               3578999999999998889999999999999999999999997654

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.2e-41  Score=286.85  Aligned_cols=196  Identities=18%  Similarity=0.189  Sum_probs=174.4

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh------hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      .|.+.+.||+|+||.||++.. .+++.||+|.+......      ..+.+.+|+.++++++||||+++++++......++
T Consensus        12 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   91 (326)
T 2y0a_A           12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL   91 (326)
T ss_dssp             HEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             ceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            378888999999999999995 46889999999754322      35678899999999999999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC----CeEEcccCCCccc
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNS  206 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~----~~kl~dfg~~~~~  206 (264)
                      ||||+++++|.+++.  ....+++..+..++.||+.||.|||++ +++||||||+||+++.++    .+||+|||++...
T Consensus        92 v~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~  168 (326)
T 2y0a_A           92 ILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI  168 (326)
T ss_dssp             EEECCCSCBHHHHHT--TSSCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred             EEEcCCCCCHHHHHH--hcCCcCHHHHHHHHHHHHHHHHHHHHC-CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeEC
Confidence            999999999999996  345799999999999999999999999 999999999999999877    7999999999865


Q ss_pred             CCC---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       207 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ...   ....+|+.|+|||++.+..++.++||||||+++|+|++|..||....
T Consensus       169 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  221 (326)
T 2y0a_A          169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT  221 (326)
T ss_dssp             CTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred             CCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence            432   34568999999999998889999999999999999999999997554

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=7.6e-42  Score=294.06  Aligned_cols=199  Identities=20%  Similarity=0.194  Sum_probs=177.1

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      ++.|++++.||+|+||.||++.. .+++.+|+|.+..........+.+|++++++++||||+++++++.+....++||||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~  129 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  129 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence            35688999999999999999995 46889999999876655566789999999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC--CCCeEEcccCCCcccCCCC--
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD--DVNPRLSCFGLMKNSRDGR--  210 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~--~~~~kl~dfg~~~~~~~~~--  210 (264)
                      +.+++|.+++.. ....+++..+..++.||+.||.|||++ +++||||||+||+++.  ++.+||+|||++.......  
T Consensus       130 ~~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~  207 (387)
T 1kob_A          130 LSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEH-SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV  207 (387)
T ss_dssp             CCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred             CCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccchHHeEEecCCCCceEEEecccceecCCCcce
Confidence            999999999864 345789999999999999999999999 9999999999999974  4789999999998765432  


Q ss_pred             -cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 -~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                       ...+|+.|+|||++.+..++.++|||||||++|||++|..||....
T Consensus       208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~  254 (387)
T 1kob_A          208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED  254 (387)
T ss_dssp             EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred             eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC
Confidence             3468999999999998889999999999999999999999997654

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=5e-42  Score=289.29  Aligned_cols=198  Identities=18%  Similarity=0.237  Sum_probs=167.5

Q ss_pred             CccccccccCCCCCCCeEEEEEe----CCCCEEEEEEeCCCC----ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCc
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE  127 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~  127 (264)
                      .+.|++++.||+|+||.||+++.    .+++.||+|++....    ......+.+|+.++++++||||+++++++...+.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            35688999999999999999996    468999999998653    2234457889999999999999999999999999


Q ss_pred             ceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      .++||||+++++|.+++..  ...+++..+..++.||+.||.|||++ |++||||||+||+++.++.+||+|||+++...
T Consensus        96 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~  172 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGHLHQK-GIIYRDLKPENIMLNHQGHVKLTDFGLCKESI  172 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred             EEEEEeCCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhC-CEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence            9999999999999999863  34688999999999999999999999 99999999999999999999999999987533


Q ss_pred             C----CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          208 D----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       208 ~----~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .    .....+|+.|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus       173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  225 (327)
T 3a62_A          173 HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN  225 (327)
T ss_dssp             ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC
Confidence            2    234568999999999998889999999999999999999999997654

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=8.8e-42  Score=298.42  Aligned_cols=198  Identities=18%  Similarity=0.200  Sum_probs=173.6

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh--hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      +.|++++.||+|+||.||++.. .+++.+|+|.+......  ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus        11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E   90 (444)
T 3soa_A           11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD   90 (444)
T ss_dssp             HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred             CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEE
Confidence            4588899999999999999985 56889999999865432  34568899999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeC---CCCCeEEcccCCCcccCCCC
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDGR  210 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~---~~~~~kl~dfg~~~~~~~~~  210 (264)
                      |+.+++|.+.+..  ...+++..+..++.||+.||.|||++ |++||||||+||+++   .++.+||+|||++.......
T Consensus        91 ~~~gg~L~~~i~~--~~~~~e~~~~~i~~qil~aL~~lH~~-givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~  167 (444)
T 3soa_A           91 LVTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQM-GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ  167 (444)
T ss_dssp             CCBCCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC
T ss_pred             eCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC
Confidence            9999999998874  45699999999999999999999999 999999999999998   46889999999997655432


Q ss_pred             ----cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       211 ----~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                          ...+|+.|+|||++.+..++.++||||||+++|+|++|.+||.....
T Consensus       168 ~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~  218 (444)
T 3soa_A          168 QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ  218 (444)
T ss_dssp             CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH
Confidence                34789999999999988999999999999999999999999976543

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=2e-41  Score=290.17  Aligned_cols=200  Identities=20%  Similarity=0.327  Sum_probs=173.4

Q ss_pred             CccccccccCCCCCCCeEEEEEe--------CCCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcC-CCCCccccceeeEeC
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL--------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEG  125 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~  125 (264)
                      .+.|++.+.||+|+||.||++.+        .++..||+|.++..... ..+.+.+|+++++++ +||||+++++++...
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            35688889999999999999985        23567999999866433 356789999999999 899999999999999


Q ss_pred             CcceEEEecCCCCCHHHhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC
Q 024659          126 DERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD  191 (264)
Q Consensus       126 ~~~~lv~e~~~~~sL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~  191 (264)
                      +..++||||+++++|.+++....              ...+++..++.++.||+.||.|||++ +++||||||+||+++.
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~  238 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTE  238 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECT
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CeeccccchhhEEECC
Confidence            99999999999999999997532              23578999999999999999999999 9999999999999999


Q ss_pred             CCCeEEcccCCCcccCCC------CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          192 DVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       192 ~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ++.+||+|||+++.....      ....+++.|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus       239 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~  310 (370)
T 2psq_A          239 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP  310 (370)
T ss_dssp             TCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             CCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence            999999999999855432      22345678999999999899999999999999999999 888887544

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=1.6e-42  Score=296.91  Aligned_cols=199  Identities=20%  Similarity=0.231  Sum_probs=167.1

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC---hhHHHHHHHHHH-HhcCCCCCccccceeeEeCCcceE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARA-VGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~-l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      .++|++++.||+|+||.||+++. .+++.||+|++.+...   .....+.+|..+ ++.++||||+++++++.+.+..++
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l  116 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF  116 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence            45688999999999999999995 4588999999975432   223445667766 567899999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC---
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR---  207 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~---  207 (264)
                      ||||+++++|.+++..  ...+++..++.++.||+.||.|||++ |++||||||+||+++.++.+||+|||+++...   
T Consensus       117 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~  193 (373)
T 2r5t_A          117 VLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSL-NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN  193 (373)
T ss_dssp             EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred             EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence            9999999999999863  45688999999999999999999999 99999999999999999999999999997532   


Q ss_pred             -CCCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          208 -DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       208 -~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                       ......+|+.|+|||++.+..++.++|+|||||++|||++|..||.....
T Consensus       194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~  244 (373)
T 2r5t_A          194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT  244 (373)
T ss_dssp             CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH
T ss_pred             CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH
Confidence             22345789999999999998999999999999999999999999976543

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.1e-41  Score=279.28  Aligned_cols=198  Identities=24%  Similarity=0.335  Sum_probs=176.0

Q ss_pred             CccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      .+.|++++.||+|+||.||++.+.++..||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   87 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM   87 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence            356889999999999999999988888999999986543 3467899999999999999999999999988999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-----C
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R  210 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-----~  210 (264)
                      ++++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++......     .
T Consensus        88 ~~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  165 (269)
T 4hcu_A           88 EHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST  165 (269)
T ss_dssp             TTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred             CCCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhC-CeecCCcchheEEEcCCCCEEecccccccccccccccccc
Confidence            99999999964 445689999999999999999999999 9999999999999999999999999998755332     2


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ...++..|+|||.+.+..++.++||||||+++++|++ |+.||....
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~  212 (269)
T 4hcu_A          166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS  212 (269)
T ss_dssp             STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred             CcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC
Confidence            3445678999999998899999999999999999999 888886543

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=4.4e-42  Score=289.13  Aligned_cols=199  Identities=19%  Similarity=0.172  Sum_probs=172.8

Q ss_pred             CCccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      -++.|++++.||+|+||.||++.+. +++.||+|++...... ..+.+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus         5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~   84 (323)
T 3tki_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL   84 (323)
T ss_dssp             TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence            3467899999999999999999954 7889999999754322 2356889999999999999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----  208 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----  208 (264)
                      ||+++++|.+++.  ....+++..+..++.|++.||.|||+. |++||||||+||+++.++.+||+|||++.....    
T Consensus        85 e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  161 (323)
T 3tki_A           85 EYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE  161 (323)
T ss_dssp             ECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred             EcCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence            9999999999986  445699999999999999999999999 999999999999999999999999999975432    


Q ss_pred             --CCcccccccccccccccCCCC-CCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 --GRSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 --~~~~~~~~~y~aPE~~~~~~~-~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                        .....+|+.|+|||++.+..+ +.++||||||+++|+|++|+.||....
T Consensus       162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  212 (323)
T 3tki_A          162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS  212 (323)
T ss_dssp             CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSC
T ss_pred             cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCc
Confidence              124568999999999987775 779999999999999999999997544

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=4.2e-42  Score=293.83  Aligned_cols=195  Identities=13%  Similarity=0.150  Sum_probs=169.0

Q ss_pred             ccccccccCCCCCCCeEEEEE------eCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC---CCCccccceeeEeCCc
Q 024659           57 AMENIVSEHGEKAPNVVYKGK------LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR---NRRLANLLGCCCEGDE  127 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~  127 (264)
                      ..|.+++.||+|+||.||+|.      ...++.||+|++....   ...+..|++++..++   |+||+++++++...+.
T Consensus        65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~  141 (365)
T 3e7e_A           65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG  141 (365)
T ss_dssp             SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC
T ss_pred             EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC
Confidence            557888899999999999994      4568899999998654   345667777777776   8999999999999999


Q ss_pred             ceEEEecCCCCCHHHhhhcC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC-----------CC
Q 024659          128 RLLVAEYMPNDTLAKHLFHW---ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-----------DV  193 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~-----------~~  193 (264)
                      .++||||+++++|.+++...   ....+++..++.++.||+.||.|||+. +|+||||||+||+++.           ++
T Consensus       142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~-~ivHrDiKp~NIll~~~~~~~~~~~~~~~  220 (365)
T 3e7e_A          142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC-EIIHGDIKPDNFILGNGFLEQDDEDDLSA  220 (365)
T ss_dssp             EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECGGGTCC------CT
T ss_pred             cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC-CeecCCCCHHHEEecccccCccccccccC
Confidence            99999999999999999632   345799999999999999999999999 9999999999999998           89


Q ss_pred             CeEEcccCCCcccC---C---CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          194 NPRLSCFGLMKNSR---D---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       194 ~~kl~dfg~~~~~~---~---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      .+||+|||+++...   .   .....+|..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus       221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~  288 (365)
T 3e7e_A          221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKN  288 (365)
T ss_dssp             TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEE
T ss_pred             CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccC
Confidence            99999999996432   1   12346899999999999989999999999999999999999998643

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=1.2e-41  Score=281.98  Aligned_cols=197  Identities=17%  Similarity=0.252  Sum_probs=170.9

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCCh--hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      +.|++++.||+|+||.||++...+++.||+|++......  ..+.+.+|++++++++||||+++++++...+..++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            468899999999999999999988899999999765422  236688999999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----C
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R  210 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~  210 (264)
                      +++ +|.+++.. ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++......    .
T Consensus        82 ~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  158 (288)
T 1ob3_A           82 LDQ-DLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT  158 (288)
T ss_dssp             CSE-EHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred             cCC-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCCEEEeECccccccCccccccc
Confidence            976 89998864 346789999999999999999999999 9999999999999999999999999998754322    2


Q ss_pred             cccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ...+|+.|+|||++.+. .++.++||||||+++|||++|+.||....
T Consensus       159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~  205 (288)
T 1ob3_A          159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS  205 (288)
T ss_dssp             ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            34678999999999765 48999999999999999999999997543

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=6e-41  Score=279.89  Aligned_cols=215  Identities=30%  Similarity=0.494  Sum_probs=184.2

Q ss_pred             CcccccCHHHHHHHhCCCcccc---ccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCC----ChhHHHHHHHHHHHhcCC
Q 024659           39 PVFCEYSIETLRTATSGFAMEN---IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLR  111 (264)
Q Consensus        39 ~~~~~~~~~~~~~~~~~~~~~~---~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~  111 (264)
                      .....|++.++..++++|+...   ..+.||+|+||.||++.. ++..||+|.+....    ....+.+.+|+.++++++
T Consensus        10 ~~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~   88 (307)
T 2nru_A           10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ   88 (307)
T ss_dssp             -CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC
T ss_pred             CCCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC
Confidence            3456789999999999997652   235679999999999987 46699999987532    233567889999999999


Q ss_pred             CCCccccceeeEeCCcceEEEecCCCCCHHHhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeC
Q 024659          112 NRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW-ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD  190 (264)
Q Consensus       112 h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~  190 (264)
                      ||||+++++++.+.+..++||||+++++|.+++... ....+++..+..++.|++.||.|||+. +++|+||||+||+++
T Consensus        89 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dlkp~Nili~  167 (307)
T 2nru_A           89 HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN-HHIHRDIKSANILLD  167 (307)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEC
T ss_pred             CCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecCCCCHHHEEEc
Confidence            999999999999989999999999999999998643 235689999999999999999999999 999999999999999


Q ss_pred             CCCCeEEcccCCCcccCCC------CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          191 DDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       191 ~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .++.++|+|||++......      ....+++.|+|||.+.+ .++.++||||||+++|+|++|..||....
T Consensus       168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~  238 (307)
T 2nru_A          168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHR  238 (307)
T ss_dssp             TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTB
T ss_pred             CCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCc
Confidence            9999999999998765432      23467899999998864 58899999999999999999999997543

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=2.9e-41  Score=280.00  Aligned_cols=195  Identities=18%  Similarity=0.238  Sum_probs=169.6

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      +.|++++.||+|+||+||++.+ .+++.||+|++.....  .....+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            4688999999999999999996 4688999999975432  234678899999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----  209 (264)
                      |+.+ ++.+.+.. ....+++..+..++.|++.||.|||++ |++||||||+||+++.++.+||+|||++......    
T Consensus        82 ~~~~-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~-~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  158 (292)
T 3o0g_A           82 FCDQ-DLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSR-NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY  158 (292)
T ss_dssp             CCSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCC
T ss_pred             cCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeecccceecCCccccc
Confidence            9976 56666643 456799999999999999999999999 9999999999999999999999999999765422    


Q ss_pred             CcccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCC
Q 024659          210 RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      ....+|..|+|||++.+.. ++.++||||||+++++|++|..||..
T Consensus       159 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~  204 (292)
T 3o0g_A          159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP  204 (292)
T ss_dssp             CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCC
T ss_pred             cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcC
Confidence            3346789999999998766 89999999999999999999888643

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=1e-41  Score=290.03  Aligned_cols=198  Identities=19%  Similarity=0.209  Sum_probs=172.7

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCC-----CChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS-----AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      .|++++.||+|+||.||++.. .+++.||+|++...     .....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus        25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv  104 (351)
T 3c0i_A           25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMV  104 (351)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            488899999999999999995 56899999998632     112356789999999999999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCC---eEEcccCCCccc
Q 024659          132 AEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN---PRLSCFGLMKNS  206 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~---~kl~dfg~~~~~  206 (264)
                      |||+++++|.+.+...  ....+++..+..++.||+.||.|||++ +++||||||+||+++.++.   +||+|||++...
T Consensus       105 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~  183 (351)
T 3c0i_A          105 FEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN-NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL  183 (351)
T ss_dssp             EECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred             EeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence            9999999998877532  234689999999999999999999999 9999999999999986544   999999999765


Q ss_pred             CCC----CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          207 RDG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       207 ~~~----~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ...    ....+|+.|+|||++.+..++.++||||||+++|+|++|..||....
T Consensus       184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  237 (351)
T 3c0i_A          184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK  237 (351)
T ss_dssp             CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH
T ss_pred             cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH
Confidence            443    23468999999999998889999999999999999999999997654

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=1.4e-41  Score=286.27  Aligned_cols=199  Identities=22%  Similarity=0.321  Sum_probs=171.8

Q ss_pred             CccccccccCCCCCCCeEEEEEeC----CCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      ...|++++.||+|+||.||++.+.    .+..||+|.+..... ...+.+.+|+.++++++||||+++++++.+.+..++
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  127 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI  127 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence            356888999999999999999963    345699999986533 334578999999999999999999999998889999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~  210 (264)
                      ||||+++++|.+++.. ....+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus       128 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  205 (325)
T 3kul_A          128 VTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDL-GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP  205 (325)
T ss_dssp             EEECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred             EeeCCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence            9999999999999964 445799999999999999999999999 99999999999999999999999999998654322


Q ss_pred             -------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          211 -------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       211 -------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                             ...+|..|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus       206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~  259 (325)
T 3kul_A          206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT  259 (325)
T ss_dssp             -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSC
T ss_pred             cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCC
Confidence                   1234568999999998889999999999999999999 999986543

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=1.6e-41  Score=285.83  Aligned_cols=213  Identities=28%  Similarity=0.471  Sum_probs=181.9

Q ss_pred             CCcccccCHHHHHHHhCCCccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCcc
Q 024659           38 VPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLA  116 (264)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~  116 (264)
                      ....+.++..++....++|.   +.+.||+|+||.||++...+++.||+|++...... ....+.+|++++++++||||+
T Consensus        14 ~~~~~~~~~~~~~~~~~~y~---~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv   90 (326)
T 3uim_A           14 LGQLKRFSLRELQVASDNFS---NKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL   90 (326)
T ss_dssp             -CCCEECCTHHHHTTTTSSC---STTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBC
T ss_pred             cCccceecHHHHHHHhhccc---cceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCcc
Confidence            34456789999887776654   55666999999999999878899999999865422 223688999999999999999


Q ss_pred             ccceeeEeCCcceEEEecCCCCCHHHhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCC--CceeeccCCCCeeeCCC
Q 024659          117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKE--RALYHDLNAYRIVFDDD  192 (264)
Q Consensus       117 ~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lh~~~--~i~H~dl~~~Nil~~~~  192 (264)
                      ++++++...+..++||||+.+++|.+++....  ...+++..+..++.|++.||.|||+..  +++|+||||+||+++.+
T Consensus        91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~  170 (326)
T 3uim_A           91 RLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE  170 (326)
T ss_dssp             CCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTT
T ss_pred             ceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCC
Confidence            99999999999999999999999999997542  335899999999999999999999863  89999999999999999


Q ss_pred             CCeEEcccCCCcccCCC-----CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCC
Q 024659          193 VNPRLSCFGLMKNSRDG-----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       193 ~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                      +.+||+|||++......     ....+|+.|+|||++.+..++.++||||||+++|+|++|+.||.
T Consensus       171 ~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  236 (326)
T 3uim_A          171 FEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD  236 (326)
T ss_dssp             CCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred             CCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccc
Confidence            99999999999765432     22347899999999988889999999999999999999999995

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=2.8e-41  Score=291.13  Aligned_cols=199  Identities=15%  Similarity=0.098  Sum_probs=174.9

Q ss_pred             ccccccccCCCC--CCCeEEEEEeC-CCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           57 AMENIVSEHGEK--APNVVYKGKLE-NQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        57 ~~~~~l~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      ..|++++.||+|  +||.||++.+. +++.||+|++....  ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  104 (389)
T 3gni_B           25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV  104 (389)
T ss_dssp             GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEE
Confidence            568899999999  99999999964 68999999997543  22345688899999999999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC----
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR----  207 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~----  207 (264)
                      |||+++++|.+++.......+++..+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||.+....    
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~  183 (389)
T 3gni_B          105 TSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM-GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQ  183 (389)
T ss_dssp             EECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCGGGCEECEETTE
T ss_pred             EEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEcccccceeeccccc
Confidence            9999999999999765556799999999999999999999999 99999999999999999999999999875321    


Q ss_pred             -------CCCcccccccccccccccC--CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          208 -------DGRSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       208 -------~~~~~~~~~~y~aPE~~~~--~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                             ......+|..|+|||++.+  ..++.++|||||||++|||++|+.||....
T Consensus       184 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  241 (389)
T 3gni_B          184 RQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP  241 (389)
T ss_dssp             ECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             cccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence                   1122367888999999987  568999999999999999999999997543

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=2e-41  Score=281.80  Aligned_cols=197  Identities=15%  Similarity=0.187  Sum_probs=167.3

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh--------------------------hHHHHHHHHHHHh
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--------------------------DARQFLEEARAVG  108 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~e~~~l~  108 (264)
                      .+.|++++.||+|+||.||++.+ .+++.||+|++......                          ..+.+.+|+++++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            46688999999999999999995 56889999999754311                          1245789999999


Q ss_pred             cCCCCCccccceeeEe--CCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCC
Q 024659          109 QLRNRRLANLLGCCCE--GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR  186 (264)
Q Consensus       109 ~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~N  186 (264)
                      +++||||+++++++.+  ....++||||+++++|.+++   ....+++..+..++.|++.||.|||++ +++||||||+|
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~N  167 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP---TLKPLSEDQARFYFQDLIKGIEYLHYQ-KIIHRDIKPSN  167 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS---CSSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGG
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHH
Confidence            9999999999999986  45789999999999998865   445799999999999999999999999 99999999999


Q ss_pred             eeeCCCCCeEEcccCCCcccCCC----CcccccccccccccccCCC---CCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          187 IVFDDDVNPRLSCFGLMKNSRDG----RSYSTNLAFTPPEYLRTGR---VTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       187 il~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~---~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      |+++.++.+||+|||++......    ....+|+.|+|||.+.+..   ++.++||||||+++|+|++|+.||....
T Consensus       168 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~  244 (298)
T 2zv2_A          168 LLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER  244 (298)
T ss_dssp             EEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             EEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence            99999999999999999865433    2346889999999998665   3778999999999999999999997543

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=4.6e-41  Score=283.09  Aligned_cols=195  Identities=18%  Similarity=0.266  Sum_probs=167.2

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCc-------
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE-------  127 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-------  127 (264)
                      +.|++++.||+|+||.||++.+. +++.||+|++..... ...+.+.+|++++++++||||+++++++.+...       
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   85 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM   85 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence            45788999999999999999965 789999999975443 345678999999999999999999999866432       


Q ss_pred             --------------------------------------------------ceEEEecCCCCCHHHhhhcCCC-CCCCHHH
Q 024659          128 --------------------------------------------------RLLVAEYMPNDTLAKHLFHWET-QPMKWAM  156 (264)
Q Consensus       128 --------------------------------------------------~~lv~e~~~~~sL~~~l~~~~~-~~~~~~~  156 (264)
                                                                        .++||||+++++|.+++..... ...++..
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~  165 (332)
T 3qd2_B           86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV  165 (332)
T ss_dssp             HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred             hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence                                                              7899999999999999975322 3456677


Q ss_pred             HHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----------------Ccccccccccc
Q 024659          157 RLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----------------RSYSTNLAFTP  220 (264)
Q Consensus       157 ~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----------------~~~~~~~~y~a  220 (264)
                      ++.++.||+.||.|||++ +++||||||+||+++.++.+||+|||+++.....                ....+|+.|+|
T Consensus       166 ~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a  244 (332)
T 3qd2_B          166 CLHIFIQIAEAVEFLHSK-GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS  244 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred             HHHHHHHHHHHHHHHHhC-CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence            899999999999999999 9999999999999999999999999998865433                22458899999


Q ss_pred             cccccCCCCCCccceechHHHHHHHHhCCCCC
Q 024659          221 PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP  252 (264)
Q Consensus       221 PE~~~~~~~~~~~DiwslG~~l~el~~g~~~~  252 (264)
                      ||++.+..++.++||||||+++|||++|..++
T Consensus       245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~  276 (332)
T 3qd2_B          245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQ  276 (332)
T ss_dssp             HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCH
T ss_pred             hHHhcCCCCcchhhHHHHHHHHHHHHHcCCCh
Confidence            99999989999999999999999999998765

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=1.2e-41  Score=304.10  Aligned_cols=201  Identities=20%  Similarity=0.242  Sum_probs=178.0

Q ss_pred             CCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      ..+.|++++.||+|+||.||++.. .+++.||+|++....   ......+.+|++++++++||||+++++++.+.+..++
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l  261 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL  261 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence            345688889999999999999995 468999999996532   1234567899999999999999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-  209 (264)
                      ||||+++++|.+++.......+++..++.++.||+.||.|||++ +|+||||||+||+++.++.+||+|||++...... 
T Consensus       262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~-gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~  340 (576)
T 2acx_A          262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE-RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ  340 (576)
T ss_dssp             EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred             EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeccCCchheEEEeCCCCeEEEecccceecccCc
Confidence            99999999999999764455699999999999999999999999 9999999999999999999999999999876443 


Q ss_pred             --CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                        ....+|+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       341 ~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~  389 (576)
T 2acx_A          341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK  389 (576)
T ss_dssp             CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSS
T ss_pred             cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccc
Confidence              23478999999999998889999999999999999999999998653

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=1.7e-41  Score=286.18  Aligned_cols=195  Identities=16%  Similarity=0.129  Sum_probs=171.9

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEEEec
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      ..|++++.||+|+||.||++.. .+++.||+|.+.....  .+.+.+|+++++++ +|+||+++++++...+..++||||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~   86 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL   86 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred             CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence            3578888999999999999995 6788999999875542  23578899999999 899999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCC-----eEEcccCCCcccCCC
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN-----PRLSCFGLMKNSRDG  209 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~-----~kl~dfg~~~~~~~~  209 (264)
                      + +++|.+++.. ....+++..++.++.|++.||.|||+. +++||||||+||+++.++.     +||+|||++......
T Consensus        87 ~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~-~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~  163 (330)
T 2izr_A           87 L-GPSLEDLFDL-CDRTFSLKTVLMIAIQLISRMEYVHSK-NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP  163 (330)
T ss_dssp             C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred             C-CCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence            9 8899999975 356799999999999999999999999 9999999999999998876     999999999864322


Q ss_pred             -----------CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 -----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 -----------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                                 ....+|+.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus       164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~  221 (330)
T 2izr_A          164 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLK  221 (330)
T ss_dssp             TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             CCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccc
Confidence                       24568899999999999999999999999999999999999998643

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=3.7e-41  Score=282.76  Aligned_cols=198  Identities=18%  Similarity=0.280  Sum_probs=159.7

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      +.|++++.||+|+||.||++.. .+++.||+|.+..... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   84 (317)
T 2pmi_A            5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF   84 (317)
T ss_dssp             --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred             cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence            4578889999999999999995 5688999999975532 2346788999999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-
Q 024659          135 MPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       135 ~~~~sL~~~l~~~----~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-  209 (264)
                      ++ ++|.+++...    ....+++..+..++.||+.||.|||++ |++||||||+||+++.++.+||+|||++...... 
T Consensus        85 ~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  162 (317)
T 2pmi_A           85 MD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN-KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV  162 (317)
T ss_dssp             CC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCSSCEETTSCC
T ss_pred             cC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCChHHeEEcCCCCEEECcCccceecCCCc
Confidence            97 4899988642    224689999999999999999999999 9999999999999999999999999999765422 


Q ss_pred             ---CcccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 ---RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ---~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                         ....+|+.|+|||++.+. .++.++||||||+++|||++|+.||....
T Consensus       163 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  213 (317)
T 2pmi_A          163 NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN  213 (317)
T ss_dssp             CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence               334678999999999764 58999999999999999999999997554

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=2.3e-41  Score=290.03  Aligned_cols=195  Identities=19%  Similarity=0.201  Sum_probs=167.9

Q ss_pred             cccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCC
Q 024659           60 NIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND  138 (264)
Q Consensus        60 ~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  138 (264)
                      ...+.||+|+||.||++.. .+++.||+|++........+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus        92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~  171 (373)
T 2x4f_A           92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG  171 (373)
T ss_dssp             EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred             ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence            3355689999999999995 568999999998776566678999999999999999999999999999999999999999


Q ss_pred             CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeee--CCCCCeEEcccCCCcccCCC---Cccc
Q 024659          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF--DDDVNPRLSCFGLMKNSRDG---RSYS  213 (264)
Q Consensus       139 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~--~~~~~~kl~dfg~~~~~~~~---~~~~  213 (264)
                      +|.+++.. ....+++..+..++.||+.||.|||+. +++||||||+||++  +.++.+||+|||++......   ....
T Consensus       172 ~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~  249 (373)
T 2x4f_A          172 ELFDRIID-ESYNLTELDTILFMKQICEGIRHMHQM-YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF  249 (373)
T ss_dssp             EEHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCC
T ss_pred             cHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccccccc
Confidence            99998864 345689999999999999999999999 99999999999999  56789999999999865443   2345


Q ss_pred             ccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       214 ~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      +|+.|+|||++.+..++.++||||||+++|||++|..||....
T Consensus       250 gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~  292 (373)
T 2x4f_A          250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN  292 (373)
T ss_dssp             SSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             CCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC
Confidence            8899999999988889999999999999999999999997654

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=5.5e-41  Score=286.28  Aligned_cols=197  Identities=20%  Similarity=0.192  Sum_probs=174.3

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC-----CCCccccceeeEeCCcceE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-----NRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~~i~~~~~~~~~~~~~~l  130 (264)
                      ..|.++++||+|+||.||++.+ .+++.||+|++.... .....+..|+++++.++     |+||+++++++...+..++
T Consensus        35 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~l  113 (360)
T 3llt_A           35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCL  113 (360)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEE
T ss_pred             CEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEE
Confidence            4578888999999999999996 568899999997533 33456778999999986     9999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC-------------------
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-------------------  191 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~-------------------  191 (264)
                      ||||+ +++|.+++.......+++..+..++.||+.||.|||+. +++||||||+||+++.                   
T Consensus       114 v~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~  191 (360)
T 3llt_A          114 IFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM-SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKI  191 (360)
T ss_dssp             EECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEE
T ss_pred             EEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCcccEEEccccccccccchhcccccccc
Confidence            99999 88999999765556799999999999999999999999 9999999999999975                   


Q ss_pred             ------CCCeEEcccCCCcccCC-CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          192 ------DVNPRLSCFGLMKNSRD-GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       192 ------~~~~kl~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                            ++.+||+|||++..... .....+|+.|+|||++.+..++.++|||||||++|+|++|+.||....
T Consensus       192 ~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  263 (360)
T 3llt_A          192 QIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHE  263 (360)
T ss_dssp             EEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCc
Confidence                  78999999999986443 344578999999999999999999999999999999999999997544

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=2.8e-41  Score=300.75  Aligned_cols=200  Identities=18%  Similarity=0.250  Sum_probs=177.1

Q ss_pred             CCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      ..+.|++++.||+|+||.||++++ .+++.||+|++.+..   ....+.+.+|++++++++||||+++++++.+....++
T Consensus       183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l  262 (543)
T 3c4z_A          183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCL  262 (543)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEE
Confidence            446788888999999999999996 468999999997532   1234568899999999999999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          131 VAEYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      ||||+++++|.+++....  ...+++..++.++.||+.||.|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus       263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~-gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~  341 (543)
T 3c4z_A          263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA  341 (543)
T ss_dssp             EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc-CCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence            999999999999986532  45689999999999999999999999 999999999999999999999999999986543


Q ss_pred             C----CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          209 G----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       209 ~----~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      .    ....+|+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus       342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~  392 (543)
T 3c4z_A          342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR  392 (543)
T ss_dssp             TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCT
T ss_pred             CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCC
Confidence            3    2347899999999999989999999999999999999999999765

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=4.1e-41  Score=277.78  Aligned_cols=198  Identities=26%  Similarity=0.400  Sum_probs=172.9

Q ss_pred             CccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      .+.|++++.||+|+||.||++.+.++..||+|.+..... ..+.+.+|++++++++|+||+++++++.+.+..++||||+
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  101 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM  101 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence            456889999999999999999998888999999986543 3467889999999999999999999999989999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-----C
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R  210 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-----~  210 (264)
                      ++++|.+++.. ....+++..++.++.|++.||.|||++ +++|+||||+||+++.++.++|+|||++......     .
T Consensus       102 ~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~  179 (283)
T 3gen_A          102 ANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV  179 (283)
T ss_dssp             TTCBHHHHHHC-GGGCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTT
T ss_pred             CCCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCccceEEEcCCCCEEEcccccccccccccccccc
Confidence            99999999964 245699999999999999999999999 9999999999999999999999999998765332     2


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ...+++.|+|||.+.+..++.++||||||+++|+|++ |+.||....
T Consensus       180 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~  226 (283)
T 3gen_A          180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT  226 (283)
T ss_dssp             STTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred             CCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC
Confidence            3345678999999998889999999999999999998 998887543

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1e-41  Score=288.14  Aligned_cols=198  Identities=21%  Similarity=0.278  Sum_probs=173.2

Q ss_pred             CCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      ....|.+++.||+|+||.||++.+ .+++.||+|++....   ......+.+|+.+++.++||||+++++++...+..++
T Consensus         7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l   86 (336)
T 3h4j_B            7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM   86 (336)
T ss_dssp             EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            356789999999999999999995 678899999986432   1123568899999999999999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-  209 (264)
                      ||||+ +++|.+++..  ...+++..+..++.|++.||.|||+. |++||||||+||+++.++.+||+|||++...... 
T Consensus        87 v~E~~-~g~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~  162 (336)
T 3h4j_B           87 VIEYA-GGELFDYIVE--KKRMTEDEGRRFFQQIICAIEYCHRH-KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN  162 (336)
T ss_dssp             EECCC-CEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHH-TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred             EEECC-CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence            99999 6789988863  35699999999999999999999999 9999999999999999999999999999865443 


Q ss_pred             --CcccccccccccccccCCCC-CCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 --RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~~~~~~-~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                        ....+|+.|+|||++.+..+ ++++||||||+++|+|++|+.||....
T Consensus       163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~  212 (336)
T 3h4j_B          163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF  212 (336)
T ss_dssp             TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSS
T ss_pred             ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCcc
Confidence              34568899999999988775 689999999999999999999997543

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=2.1e-41  Score=277.38  Aligned_cols=198  Identities=22%  Similarity=0.362  Sum_probs=175.0

Q ss_pred             CccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      .+.|++++.||+|+||.||++.+.++..||+|.+..... ..+.+.+|++++++++||||+++++++...+..++||||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI   85 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence            356889999999999999999988888999999986553 3467899999999999999999999999888999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC-----
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----  210 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-----  210 (264)
                      ++++|.+++.. ....+++..++.++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......     
T Consensus        86 ~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~  163 (268)
T 3sxs_A           86 SNGCLLNYLRS-HGKGLEPSQLLEMCYDVCEGMAFLESH-QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV  163 (268)
T ss_dssp             TTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHT-TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECC
T ss_pred             CCCcHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCcCcceEEECCCCCEEEccCccceecchhhhhccc
Confidence            99999999864 344689999999999999999999999 99999999999999999999999999987654432     


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ...++..|+|||.+.+..++.++||||||+++++|++ |+.||....
T Consensus       164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~  210 (268)
T 3sxs_A          164 GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT  210 (268)
T ss_dssp             SCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred             CCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccC
Confidence            2344567999999998889999999999999999999 888886443

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=7.1e-42  Score=286.31  Aligned_cols=197  Identities=18%  Similarity=0.212  Sum_probs=167.6

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh---hHHHHHHHHHHHhcCCCCCccccceeeEeCCcc----
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDER----  128 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~----  128 (264)
                      +.|++++.||+|+||.||++.+ .+++.||+|++......   ....+.+|++++++++||||+++++++......    
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~   91 (311)
T 3ork_A           12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   91 (311)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence            4588899999999999999995 67889999999865322   235688999999999999999999998775544    


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      ++||||+++++|.+++..  ...+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++.....
T Consensus        92 ~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~  168 (311)
T 3ork_A           92 YIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQN-GIIHRDVKPANIMISATNAVKVMDFGIARAIAD  168 (311)
T ss_dssp             EEEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred             EEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence            999999999999999863  35689999999999999999999999 999999999999999999999999999875433


Q ss_pred             C-------CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 G-------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 ~-------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .       ....+++.|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus       169 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~  223 (311)
T 3ork_A          169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS  223 (311)
T ss_dssp             -------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence            2       22357899999999999899999999999999999999999997654

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=2.5e-41  Score=288.62  Aligned_cols=197  Identities=17%  Similarity=0.156  Sum_probs=165.4

Q ss_pred             CCccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      ..+.|++++.||+|+||.||++... +++.||+|++..... ..+.+.+|+.++++++||||+++++++.+....++|||
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e   96 (361)
T 3uc3_A           18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME   96 (361)
T ss_dssp             CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence            4466899999999999999999964 688999999976542 33568899999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCC--eEEcccCCCcccCC---
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN--PRLSCFGLMKNSRD---  208 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~--~kl~dfg~~~~~~~---  208 (264)
                      |+.+++|.+++..  ...+++..++.++.|++.||.|||++ |++||||||+||+++.++.  +||+|||+++....   
T Consensus        97 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~ql~~~L~~LH~~-~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~  173 (361)
T 3uc3_A           97 YASGGELYERICN--AGRFSEDEARFFFQQLLSGVSYCHSM-QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ  173 (361)
T ss_dssp             CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred             eCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEcCCCCceEEEeecCccccccccCC
Confidence            9999999999863  34699999999999999999999999 9999999999999987665  99999999874322   


Q ss_pred             CCcccccccccccccccCCCCCCc-cceechHHHHHHHHhCCCCCCCC
Q 024659          209 GRSYSTNLAFTPPEYLRTGRVTPE-SVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       209 ~~~~~~~~~y~aPE~~~~~~~~~~-~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      .....+|+.|+|||++.+..++.+ +||||||+++|+|++|+.||...
T Consensus       174 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~  221 (361)
T 3uc3_A          174 PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDP  221 (361)
T ss_dssp             -------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC--
T ss_pred             CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCC
Confidence            234578999999999988887655 99999999999999999999754

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=2.5e-41  Score=287.30  Aligned_cols=195  Identities=19%  Similarity=0.235  Sum_probs=173.3

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh---hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      .|.+++.||+|+||.||++.. .+++.||+|++......   ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus        55 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  134 (348)
T 1u5q_A           55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME  134 (348)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             heeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEe
Confidence            377888899999999999995 67889999999764322   23568899999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCccc
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS  213 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~~~  213 (264)
                      |+. |+|.+++.. ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++..........
T Consensus       135 ~~~-g~l~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~  211 (348)
T 1u5q_A          135 YCL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFV  211 (348)
T ss_dssp             CCS-EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCC
T ss_pred             cCC-CCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCccc
Confidence            997 578887753 345789999999999999999999999 99999999999999999999999999998877777778


Q ss_pred             cccccccccccc---CCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          214 TNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       214 ~~~~y~aPE~~~---~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      +|+.|+|||++.   +..++.++||||||+++|||++|+.||...
T Consensus       212 gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~  256 (348)
T 1u5q_A          212 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM  256 (348)
T ss_dssp             SCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             CCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            999999999985   456899999999999999999999998754

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=7e-42  Score=299.90  Aligned_cols=200  Identities=20%  Similarity=0.217  Sum_probs=167.9

Q ss_pred             CCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCC---CChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      ..+.|++++.||+|+||.||++.. .+++.||+|++...   .......+.+|+.+++.++||||+++++++...+..++
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l  225 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF  225 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence            346688999999999999999995 56899999999753   22334567789999999999999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC-
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-  208 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~-~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~-  208 (264)
                      ||||+++++|.+++..  ...+++..+..++.||+.||.|||+ . ||+||||||+||+++.++.+||+|||+++.... 
T Consensus       226 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  302 (446)
T 4ejn_A          226 VMEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD  302 (446)
T ss_dssp             EECCCSSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHHT-CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred             EEeeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcC-CEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence            9999999999998863  4578999999999999999999998 8 999999999999999999999999999875332 


Q ss_pred             ---CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          209 ---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       209 ---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                         .....+|+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus       303 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  354 (446)
T 4ejn_A          303 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH  354 (446)
T ss_dssp             ----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH
Confidence               2345789999999999999999999999999999999999999976543

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=1e-41  Score=282.17  Aligned_cols=198  Identities=21%  Similarity=0.309  Sum_probs=174.0

Q ss_pred             CccccccccCCCCCCCeEEEEEeCC-C-------CEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCc
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLEN-Q-------FRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE  127 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~  127 (264)
                      .+.|.+++.||+|+||.||++.+.. +       ..||+|.+........+.+.+|++++++++||||+++++++...+.
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE   86 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence            3567888999999999999998543 3       4799999987665667789999999999999999999999999999


Q ss_pred             ceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCC--------eEEcc
Q 024659          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN--------PRLSC  199 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~--------~kl~d  199 (264)
                      .++||||+++++|.+++.. ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.        +||+|
T Consensus        87 ~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D  164 (289)
T 4fvq_A           87 NILVQEFVKFGSLDTYLKK-NKNCINILWKLEVAKQLAAAMHFLEEN-TLIHGNVCAKNILLIREEDRKTGNPPFIKLSD  164 (289)
T ss_dssp             CEEEEECCTTCBHHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred             CEEEEECCCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHhhC-CeECCCcCcceEEEecCCcccccccceeeecc
Confidence            9999999999999999975 334589999999999999999999999 9999999999999998876        99999


Q ss_pred             cCCCcccCCCCcccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          200 FGLMKNSRDGRSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       200 fg~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ||++..........++..|+|||++.+ ..++.++||||||+++|||++|..|+...
T Consensus       165 fg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~  221 (289)
T 4fvq_A          165 PGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA  221 (289)
T ss_dssp             CCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             CcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccc
Confidence            999987666556678899999999987 56899999999999999999976655443

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=1.9e-41  Score=281.50  Aligned_cols=197  Identities=21%  Similarity=0.325  Sum_probs=170.5

Q ss_pred             ccccccccCCCCCCCeEEEEEe-----CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEe--CCcce
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERL  129 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~  129 (264)
                      ..|++++.||+|+||.||++++     .+++.||+|++........+.+.+|++++++++||||+++++++..  ....+
T Consensus        10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   89 (295)
T 3ugc_A           10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK   89 (295)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred             HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence            5588999999999999999984     3588999999987776666789999999999999999999999865  35689


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~  209 (264)
                      +||||+++++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++......
T Consensus        90 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  167 (295)
T 3ugc_A           90 LIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD  167 (295)
T ss_dssp             EEEECCTTCBHHHHHHH-CGGGCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred             EEEEeCCCCCHHHHHHh-cccccCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence            99999999999999965 334589999999999999999999999 9999999999999999999999999999865432


Q ss_pred             C-------cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 R-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 ~-------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      .       ...++..|+|||.+.+..++.++||||||+++|||++|..|+...
T Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~  220 (295)
T 3ugc_A          168 KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP  220 (295)
T ss_dssp             --------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSH
T ss_pred             cceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCC
Confidence            2       234567799999999999999999999999999999999887643

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=3.3e-41  Score=286.71  Aligned_cols=195  Identities=22%  Similarity=0.255  Sum_probs=159.4

Q ss_pred             cccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      .|++.+.||+|+||.||++.+. +++.||+|++....  ..+.+.+|++++++++||||+++++++...+..++||||++
T Consensus        54 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~  131 (349)
T 2w4o_A           54 FFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVT  131 (349)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             cEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCC
Confidence            4778888999999999999965 57899999998643  34567889999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC---CCCeEEcccCCCcccCCC---C
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRDG---R  210 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~---~~~~kl~dfg~~~~~~~~---~  210 (264)
                      +++|.+++.  ....+++..+..++.|++.||.|||+. +++||||||+||+++.   ++.+||+|||++......   .
T Consensus       132 ~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~  208 (349)
T 2w4o_A          132 GGELFDRIV--EKGYYSERDAADAVKQILEAVAYLHEN-GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK  208 (349)
T ss_dssp             SCBHHHHHT--TCSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEESSSSTTCCEEECCCC------------
T ss_pred             CCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCcccEEEecCCCCCCEEEccCccccccCcccccc
Confidence            999999986  345689999999999999999999999 9999999999999975   789999999998765432   3


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                      ...+|+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus       209 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~  255 (349)
T 2w4o_A          209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG  255 (349)
T ss_dssp             ----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC
T ss_pred             cccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcc
Confidence            34678999999999988999999999999999999999999975543

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=6.8e-41  Score=293.86  Aligned_cols=199  Identities=28%  Similarity=0.392  Sum_probs=173.4

Q ss_pred             CCCccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCC-cceEEE
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-ERLLVA  132 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~  132 (264)
                      -+.+.+++++.||+|+||.||++.+. ++.||+|.++...  ..+.+.+|++++++++||||+++++++.... ..++||
T Consensus       190 i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~  266 (450)
T 1k9a_A          190 LNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT  266 (450)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred             cChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence            34567889999999999999999976 5699999998654  4567999999999999999999999987765 689999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-Cc
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RS  211 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-~~  211 (264)
                      ||+++++|.+++.......+++..++.++.||+.||.|||++ +++||||||+||+++.++.+||+|||+++..... ..
T Consensus       267 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~  345 (450)
T 1k9a_A          267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT  345 (450)
T ss_dssp             ECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccC
Confidence            999999999999764444579999999999999999999999 9999999999999999999999999999854432 22


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ..++..|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus       346 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~  391 (450)
T 1k9a_A          346 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP  391 (450)
T ss_dssp             -CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSC
T ss_pred             CCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            356788999999999999999999999999999998 999987543

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=3.7e-41  Score=295.85  Aligned_cols=198  Identities=21%  Similarity=0.331  Sum_probs=174.2

Q ss_pred             CccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      .+.+++.+.||+|+||.||+|.+.++..||+|.++... ...+.+.+|++++++++||||+++++++. .+..++||||+
T Consensus       187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~  264 (454)
T 1qcf_A          187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM  264 (454)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred             hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence            35578888999999999999999888899999998654 34678999999999999999999999986 66789999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-----C
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R  210 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-----~  210 (264)
                      ++++|.+++.......+++..+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||+++.....     .
T Consensus       265 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~  343 (454)
T 1qcf_A          265 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE  343 (454)
T ss_dssp             TTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTC
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccC
Confidence            999999999743334688999999999999999999999 9999999999999999999999999999865432     2


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ...++..|+|||++....++.++||||||+++|||++ |+.||....
T Consensus       344 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~  390 (454)
T 1qcf_A          344 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS  390 (454)
T ss_dssp             SSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             CCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC
Confidence            2345678999999998899999999999999999999 999987543

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=6e-41  Score=288.95  Aligned_cols=195  Identities=22%  Similarity=0.315  Sum_probs=161.0

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCC--CChhHHHHHHHHHHHhcCC-CCCccccceeeEeCC--cceE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGD--ERLL  130 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~--~~~l  130 (264)
                      ..|++++.||+|+||.||++.+ .+++.||+|++...  .......+.+|+.+++++. |+||+++++++...+  ..++
T Consensus         9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~l   88 (388)
T 3oz6_A            9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL   88 (388)
T ss_dssp             TTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEE
T ss_pred             CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEE
Confidence            4688999999999999999995 56899999999754  3334566889999999997 999999999997654  6899


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC--
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--  208 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~--  208 (264)
                      ||||+++ +|.+++..   ..+++..+..++.||+.||.|||+. |++||||||+||+++.++.+||+|||+++....  
T Consensus        89 v~e~~~~-~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  163 (388)
T 3oz6_A           89 VFDYMET-DLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSG-GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR  163 (388)
T ss_dssp             EEECCSE-EHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred             EecccCc-CHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence            9999974 79998864   4689999999999999999999999 999999999999999999999999999975422  


Q ss_pred             -----------------------CCcccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 -----------------------GRSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 -----------------------~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                                             .....+|+.|+|||++.+ ..++.++|||||||+++||++|++||....
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~  235 (388)
T 3oz6_A          164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS  235 (388)
T ss_dssp             CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                                   122468899999999986 568999999999999999999999998654

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=6e-41  Score=281.56  Aligned_cols=197  Identities=15%  Similarity=0.197  Sum_probs=170.7

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCC--cceEEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGD--ERLLVA  132 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~  132 (264)
                      ..|.+++.||+|+||.||++.+. +++.||+|++..... ...+.+.+|++++++++||||+++++++....  ..++||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            45888999999999999999965 588999999985432 23566889999999999999999999998755  679999


Q ss_pred             ecCCCCCHHHhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeee----CCCCCeEEcccCCCcccC
Q 024659          133 EYMPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF----DDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~----~~~~~~kl~dfg~~~~~~  207 (264)
                      ||+++++|.+++.... ...+++..++.++.|++.||.|||+. +++||||||+||++    +.++.+||+|||++....
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~  167 (319)
T 4euu_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE  167 (319)
T ss_dssp             ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred             eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence            9999999999997532 23489999999999999999999999 99999999999999    777889999999998654


Q ss_pred             CCC---ccccccccccccccc--------CCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          208 DGR---SYSTNLAFTPPEYLR--------TGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       208 ~~~---~~~~~~~y~aPE~~~--------~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      ...   ...+|..|+|||++.        +..++.++||||||+++|||++|+.||..
T Consensus       168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  225 (319)
T 4euu_A          168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP  225 (319)
T ss_dssp             TTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEEC
T ss_pred             CCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            432   346789999999986        46789999999999999999999999963

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=1.4e-40  Score=277.94  Aligned_cols=198  Identities=17%  Similarity=0.185  Sum_probs=168.1

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC-----hhHHHHHHHHHHHhcC---CCCCccccceeeEeCC-
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-----PDARQFLEEARAVGQL---RNRRLANLLGCCCEGD-  126 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l---~h~~i~~~~~~~~~~~-  126 (264)
                      +.|++++.||+|+||.||++.+ .+++.||+|.+.....     .....+.+|+++++++   +||||+++++++.... 
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~   88 (308)
T 3g33_A            9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT   88 (308)
T ss_dssp             -CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCS
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCC
Confidence            4688889999999999999995 6688999999874321     1124566677776666   4999999999998755 


Q ss_pred             ----cceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCC
Q 024659          127 ----ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL  202 (264)
Q Consensus       127 ----~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~  202 (264)
                          ..++++||+. ++|.+++.......+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||+
T Consensus        89 ~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~Nil~~~~~~~kl~Dfg~  166 (308)
T 3g33_A           89 DREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN-CIVHRDLKPENILVTSGGTVKLADFGL  166 (308)
T ss_dssp             SSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred             CCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEcCCCCEEEeeCcc
Confidence                4789999997 5899999765555699999999999999999999999 999999999999999999999999999


Q ss_pred             CcccCCC---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          203 MKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       203 ~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      +......   ....+|+.|+|||++.+..++.++||||||+++|+|++|++||....
T Consensus       167 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~  223 (308)
T 3g33_A          167 ARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS  223 (308)
T ss_dssp             TTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSS
T ss_pred             ccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            9765433   23467899999999999999999999999999999999999997554

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=7.5e-41  Score=283.37  Aligned_cols=207  Identities=24%  Similarity=0.360  Sum_probs=177.3

Q ss_pred             HHHHhCCCccccccccCCCCCCCeEEEEEeC------CCCEEEEEEeCCCCChh-HHHHHHHHHHHhcCCCCCcccccee
Q 024659           49 LRTATSGFAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGC  121 (264)
Q Consensus        49 ~~~~~~~~~~~~~l~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~  121 (264)
                      +....-..+.|++++.||+|+||.||++.+.      +++.||+|.++...... .+.+.+|+.++++++||||++++++
T Consensus        39 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~  118 (343)
T 1luf_A           39 LLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGV  118 (343)
T ss_dssp             HHHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             cceeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence            3344455677889999999999999999964      34789999998754333 4568999999999999999999999


Q ss_pred             eEeCCcceEEEecCCCCCHHHhhhcCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCcee
Q 024659          122 CCEGDERLLVAEYMPNDTLAKHLFHWE----------------------TQPMKWAMRLRVALHIAEALEYCTSKERALY  179 (264)
Q Consensus       122 ~~~~~~~~lv~e~~~~~sL~~~l~~~~----------------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H  179 (264)
                      +...+..++||||+++++|.+++....                      ...+++..++.++.||+.||.|||++ +++|
T Consensus       119 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~ivH  197 (343)
T 1luf_A          119 CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER-KFVH  197 (343)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCC
T ss_pred             EccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC-Ceec
Confidence            999999999999999999999997532                      15689999999999999999999999 9999


Q ss_pred             eccCCCCeeeCCCCCeEEcccCCCcccCC------CCcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCC
Q 024659          180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRD------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIP  252 (264)
Q Consensus       180 ~dl~~~Nil~~~~~~~kl~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~  252 (264)
                      +||||+||+++.++.+||+|||++.....      .....++..|+|||++.+..++.++||||||+++|||++ |..||
T Consensus       198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~  277 (343)
T 1luf_A          198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY  277 (343)
T ss_dssp             SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence            99999999999999999999999875422      223456788999999998889999999999999999999 88888


Q ss_pred             CCCc
Q 024659          253 PSHV  256 (264)
Q Consensus       253 ~~~~  256 (264)
                      ....
T Consensus       278 ~~~~  281 (343)
T 1luf_A          278 YGMA  281 (343)
T ss_dssp             TTSC
T ss_pred             CCCC
Confidence            7543

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=2.3e-41  Score=284.63  Aligned_cols=196  Identities=17%  Similarity=0.252  Sum_probs=167.3

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCc----ceEEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE----RLLVA  132 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~~lv~  132 (264)
                      ..|++++.||+|+||.||++.+. ++.||+|++.... ........|+.++++++||||+++++++.....    .++||
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~  101 (322)
T 3soc_A           24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT  101 (322)
T ss_dssp             EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             hhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence            56889999999999999999876 6799999997643 233445668899999999999999999987543    69999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC---------CceeeccCCCCeeeCCCCCeEEcccCCC
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE---------RALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~---------~i~H~dl~~~Nil~~~~~~~kl~dfg~~  203 (264)
                      ||+++++|.+++..   ..+++..+..++.|++.||.|||+..         +++||||||+||+++.++.+||+|||++
T Consensus       102 e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a  178 (322)
T 3soc_A          102 AFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA  178 (322)
T ss_dssp             ECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             ecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcc
Confidence            99999999999964   45999999999999999999999852         8999999999999999999999999999


Q ss_pred             cccCCC------CcccccccccccccccCC-----CCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          204 KNSRDG------RSYSTNLAFTPPEYLRTG-----RVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       204 ~~~~~~------~~~~~~~~y~aPE~~~~~-----~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                      +.....      ....+|+.|+|||++.+.     .++.++||||||+++|||++|+.||.....
T Consensus       179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~  243 (322)
T 3soc_A          179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVD  243 (322)
T ss_dssp             EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCC
T ss_pred             cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcc
Confidence            754332      224678999999999863     366789999999999999999999975443

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=7.4e-41  Score=294.31  Aligned_cols=195  Identities=17%  Similarity=0.197  Sum_probs=155.8

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeC-----Ccc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG-----DER  128 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~  128 (264)
                      +.|++++.||.|+||.||++.+ .+++.||+|++....  ....+.+.+|+.++++++|+||+++++++...     ...
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  132 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL  132 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence            5688999999999999999995 468899999997643  23456788999999999999999999998543     468


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      ++||||+. ++|.+++.  ....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus       133 ~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~-~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~  208 (458)
T 3rp9_A          133 YVVLEIAD-SDFKKLFR--TPVYLTELHIKTLLYNLLVGVKYVHSA-GILHRDLKPANCLVNQDCSVKVCDFGLARTVDY  208 (458)
T ss_dssp             EEEECCCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred             EEEEeccc-cchhhhcc--cCCCCCHHHHHHHHHHHHHHHHHHHhC-CcCCCCCChhhEEECCCCCEeecccccchhccC
Confidence            99999984 68999886  456799999999999999999999999 999999999999999999999999999986532


Q ss_pred             C-------------------------------Cccccccccccccccc-CCCCCCccceechHHHHHHHHh---------
Q 024659          209 G-------------------------------RSYSTNLAFTPPEYLR-TGRVTPESVMYSFGTLLLDLLS---------  247 (264)
Q Consensus       209 ~-------------------------------~~~~~~~~y~aPE~~~-~~~~~~~~DiwslG~~l~el~~---------  247 (264)
                      .                               ....+|+.|+|||++. ...++.++|||||||++|||++         
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~  288 (458)
T 3rp9_A          209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH  288 (458)
T ss_dssp             CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSG
T ss_pred             ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccc
Confidence            1                               2235689999999864 5569999999999999999999         


Q ss_pred             --CCCCCCCC
Q 024659          248 --GKHIPPSH  255 (264)
Q Consensus       248 --g~~~~~~~  255 (264)
                        |+++|++.
T Consensus       289 ~~~~p~f~g~  298 (458)
T 3rp9_A          289 ADRGPLFPGS  298 (458)
T ss_dssp             GGCCCSCC--
T ss_pred             ccccccCCCC
Confidence              66777553

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=2e-41  Score=290.85  Aligned_cols=199  Identities=26%  Similarity=0.370  Sum_probs=173.0

Q ss_pred             CccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      .+.+.+.+.||+|+||.||+|.+. +++.||+|.+...... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  192 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME  192 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence            456788899999999999999965 6889999999865432 23468899999999999999999999998889999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC---
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~---  210 (264)
                      |+++++|.+++.. ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||+++......   
T Consensus       193 ~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~  270 (377)
T 3cbl_A          193 LVQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLESK-CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAA  270 (377)
T ss_dssp             CCTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEEC
T ss_pred             cCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceee
Confidence            9999999999964 344689999999999999999999999 99999999999999999999999999987643321   


Q ss_pred             ---cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          211 ---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       211 ---~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                         ...++..|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus       271 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~  320 (377)
T 3cbl_A          271 SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS  320 (377)
T ss_dssp             CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC
T ss_pred             cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence               1234677999999998889999999999999999998 888887543

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=1.4e-40  Score=279.66  Aligned_cols=196  Identities=19%  Similarity=0.234  Sum_probs=174.3

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh------hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      .|++++.||+|+||.||++.. .+++.||+|.+......      ..+.+.+|+.++++++||||+++++++.+....++
T Consensus        13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   92 (321)
T 2a2a_A           13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVL   92 (321)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             cEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            478888999999999999995 46889999999754322      25678999999999999999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC----CeEEcccCCCccc
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNS  206 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~----~~kl~dfg~~~~~  206 (264)
                      ||||+++++|.+++.  ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++    .++|+|||++...
T Consensus        93 v~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~-~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~  169 (321)
T 2a2a_A           93 ILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI  169 (321)
T ss_dssp             EECCCCSCBHHHHHH--TCSCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCTTSSSCCEEECCCTTCEEC
T ss_pred             EEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCChHHEEEecCCCCcCCEEEccCccceec
Confidence            999999999999996  345789999999999999999999999 999999999999999887    7999999999765


Q ss_pred             CCC---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       207 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ...   ....+++.|+|||++.+..++.++||||||+++|+|++|..||....
T Consensus       170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  222 (321)
T 2a2a_A          170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT  222 (321)
T ss_dssp             CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS
T ss_pred             CccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC
Confidence            443   33467899999999998889999999999999999999999997644

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=6e-41  Score=297.37  Aligned_cols=199  Identities=22%  Similarity=0.350  Sum_probs=176.3

Q ss_pred             CccccccccCCCCCCCeEEEEEeCC-CCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      ...+++.+.||+|+||.||+|.+.. +..||+|.+.... ...+.+.+|++++++++||||+++++++......++||||
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~  297 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF  297 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence            4567888999999999999999654 7899999998654 3467799999999999999999999999988899999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC----
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----  210 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~----  210 (264)
                      +++++|.+++.......+++..++.++.||+.||.|||++ +++||||||+||+++.++.+||+|||+++......    
T Consensus       298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  376 (495)
T 1opk_A          298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH  376 (495)
T ss_dssp             CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECC
T ss_pred             cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChhhEEECCCCcEEEeecccceeccCCceeec
Confidence            9999999999865566799999999999999999999999 99999999999999999999999999998654322    


Q ss_pred             -cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       211 -~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                       ...++..|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus       377 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~  424 (495)
T 1opk_A          377 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID  424 (495)
T ss_dssp             TTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             CCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC
Confidence             2234678999999998889999999999999999999 888887544

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=8e-41  Score=294.21  Aligned_cols=194  Identities=16%  Similarity=0.215  Sum_probs=164.4

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCC--CChhHHHHHHHHHHHhcCCCCCccccceeeEeCC------c
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD------E  127 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~  127 (264)
                      ..|++++.||+|+||.||++.+ .+++.||+|++...  .....+.+.+|+.+++.++||||+++++++....      .
T Consensus        62 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~  141 (464)
T 3ttj_A           62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD  141 (464)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCe
Confidence            5688999999999999999995 46889999999764  2234567889999999999999999999996543      4


Q ss_pred             ceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      .++||||+.++ |.+.+.    ..+++..+..++.||+.||.|||+. |++||||||+||+++.++.+||+|||+++...
T Consensus       142 ~~lv~E~~~~~-l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~-~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~  215 (464)
T 3ttj_A          142 VYLVMELMDAN-LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  215 (464)
T ss_dssp             EEEEEECCSEE-HHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred             EEEEEeCCCCC-HHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence            69999999764 777664    2488999999999999999999999 99999999999999999999999999998655


Q ss_pred             CC---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          208 DG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       208 ~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ..   ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus       216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~  267 (464)
T 3ttj_A          216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD  267 (464)
T ss_dssp             -CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             CCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            43   34578999999999999999999999999999999999999998654

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=9e-41  Score=294.04  Aligned_cols=197  Identities=21%  Similarity=0.302  Sum_probs=174.8

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCC---hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      ..|.+.+.||+|+||.||+|.+. +++.||+|++.....   .....+.+|+.+++.++||||+++++++...+..++||
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~   95 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM   95 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            55888899999999999999964 689999999975321   22456889999999999999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---  209 (264)
                      ||+++++|.+++.  ....+++..+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||++......   
T Consensus        96 E~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~  172 (476)
T 2y94_A           96 EYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRH-MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL  172 (476)
T ss_dssp             ECCSSEEHHHHTT--SSSSCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCB
T ss_pred             eCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCcccccHHHEEEecCCCeEEEeccchhhccccccc
Confidence            9999999999996  445799999999999999999999999 9999999999999999999999999999865443   


Q ss_pred             CcccccccccccccccCCCC-CCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~~~~-~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ....+|+.|+|||++.+..+ +.++||||||+++|+|++|+.||....
T Consensus       173 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~  220 (476)
T 2y94_A          173 RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH  220 (476)
T ss_dssp             CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC
Confidence            34568999999999998775 689999999999999999999997654

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=6.9e-41  Score=306.45  Aligned_cols=200  Identities=20%  Similarity=0.242  Sum_probs=175.7

Q ss_pred             CCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCC---CChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcce
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS---AWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~  129 (264)
                      ..++|++++.||+|+||.||++.+ .+++.||+|++.+.   .....+.+..|..++..+ +|++|+++++++.+.+.++
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            356789999999999999999995 56889999999753   122345678899999988 6999999999999999999


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC-
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-  208 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~-  208 (264)
                      |||||+++++|.+++..  ...+++..++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.... 
T Consensus       419 lV~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~  495 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD  495 (674)
T ss_dssp             EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-SEECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred             EEEeCcCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence            99999999999999973  34699999999999999999999999 999999999999999999999999999985322 


Q ss_pred             ---CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          209 ---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       209 ---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                         .....+|+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus       496 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~  547 (674)
T 3pfq_A          496 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE  547 (674)
T ss_dssp             TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH
Confidence               2345789999999999999999999999999999999999999986543

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=1.2e-40  Score=274.21  Aligned_cols=196  Identities=19%  Similarity=0.253  Sum_probs=173.8

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      +.|.+.+.||+|+||.||++.+. ++..+|+|.+........+.+.+|++++++++||||+++++++.+....++||||+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC   88 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence            34788889999999999999954 57799999998765556778999999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeee---CCCCCeEEcccCCCcccCCC---
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDG---  209 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~---~~~~~~kl~dfg~~~~~~~~---  209 (264)
                      ++++|.+++..  ...+++..+..++.|++.||.|||++ +++|+||||+||++   +.++.++|+|||++......   
T Consensus        89 ~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~  165 (277)
T 3f3z_A           89 TGGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKL-NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM  165 (277)
T ss_dssp             CSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCB
T ss_pred             CCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccch
Confidence            99999998863  45689999999999999999999999 99999999999999   77899999999998765433   


Q ss_pred             CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ....+++.|+|||++.+. ++.++||||||+++++|++|+.||....
T Consensus       166 ~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~  211 (277)
T 3f3z_A          166 RTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPT  211 (277)
T ss_dssp             CCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             hccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCC
Confidence            344678999999998754 8999999999999999999999997644

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=5.8e-41  Score=287.54  Aligned_cols=198  Identities=23%  Similarity=0.324  Sum_probs=163.1

Q ss_pred             ccccccccCCCCCCCeEEEEEeC----CCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      ..|.+.+.||+|+||.||+|++.    ++..||+|.++.... ...+.+.+|+.++++++||||+++++++...+..++|
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  124 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV  124 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence            45778888999999999999854    467899999986543 3345789999999999999999999999998899999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS  211 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~  211 (264)
                      |||+++++|.+++.. ....+++..++.++.||+.||.|||++ +++||||||+||+++.++.+||+|||+++.......
T Consensus       125 ~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  202 (373)
T 2qol_A          125 TEYMENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE  202 (373)
T ss_dssp             EECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred             EeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCcceEEEcCCCCEEECcCccccccccCCc
Confidence            999999999999964 445789999999999999999999999 999999999999999999999999999886543221


Q ss_pred             -------ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          212 -------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       212 -------~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                             ..++..|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus       203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~  255 (373)
T 2qol_A          203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS  255 (373)
T ss_dssp             -----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC
T ss_pred             cceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC
Confidence                   123567999999998899999999999999999998 999986543

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=5.6e-41  Score=287.11  Aligned_cols=201  Identities=22%  Similarity=0.338  Sum_probs=172.0

Q ss_pred             CccccccccCCCCCCCeEEEEEeC------CCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcc
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  128 (264)
                      ...|++++.||+|+||.||+|.+.      ++..||+|+++.... .....+.+|+.++++++||||+++++++......
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            355788999999999999999953      367899999976533 3345688999999999999999999999998899


Q ss_pred             eEEEecCCCCCHHHhhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC---CeEEccc
Q 024659          129 LLVAEYMPNDTLAKHLFHWE-----TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSCF  200 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~---~~kl~df  200 (264)
                      ++||||+++++|.+++....     ...+++..++.++.||+.||.|||++ +++||||||+||+++.++   .+||+||
T Consensus       150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~~~~kL~DF  228 (367)
T 3l9p_A          150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDF  228 (367)
T ss_dssp             EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred             EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChhhEEEecCCCCceEEECCC
Confidence            99999999999999997532     24588999999999999999999999 999999999999999554   5999999


Q ss_pred             CCCccc------CCCCcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCcc
Q 024659          201 GLMKNS------RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHVS  257 (264)
Q Consensus       201 g~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~~  257 (264)
                      |+++..      .......+|+.|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus       229 G~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~  292 (367)
T 3l9p_A          229 GMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN  292 (367)
T ss_dssp             HHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred             ccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            998743      22334456889999999998899999999999999999998 8888875543

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=4.6e-41  Score=284.28  Aligned_cols=208  Identities=17%  Similarity=0.201  Sum_probs=177.0

Q ss_pred             CHHHHHHHhCCC-ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh--------hHHHHHHHHHHHhcCCCCC
Q 024659           45 SIETLRTATSGF-AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--------DARQFLEEARAVGQLRNRR  114 (264)
Q Consensus        45 ~~~~~~~~~~~~-~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~~  114 (264)
                      +++.+......+ ..|++++.||+|+||.||++.+ .+++.||+|.+......        ....+.+|+.++++++|||
T Consensus        11 ~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~   90 (335)
T 3dls_A           11 ELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHAN   90 (335)
T ss_dssp             ECCHHHHHTTHHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTT
T ss_pred             cccccccCCcccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCC
Confidence            334444443333 4588999999999999999994 56889999999765321        2234678999999999999


Q ss_pred             ccccceeeEeCCcceEEEecCCCC-CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC
Q 024659          115 LANLLGCCCEGDERLLVAEYMPND-TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV  193 (264)
Q Consensus       115 i~~~~~~~~~~~~~~lv~e~~~~~-sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~  193 (264)
                      |+++++++.+.+..++||||+..+ +|.+++.  ....+++..+..++.|++.||.|||++ +++||||||+||+++.++
T Consensus        91 Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~  167 (335)
T 3dls_A           91 IIKVLDIFENQGFFQLVMEKHGSGLDLFAFID--RHPRLDEPLASYIFRQLVSAVGYLRLK-DIIHRDIKDENIVIAEDF  167 (335)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTSCBHHHHHH--TCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTS
T ss_pred             EeeEEEEEeeCCEEEEEEEeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEEeccCHHHEEEcCCC
Confidence            999999999999999999998776 9999986  445799999999999999999999999 999999999999999999


Q ss_pred             CeEEcccCCCcccCCCC---cccccccccccccccCCCC-CCccceechHHHHHHHHhCCCCCCCC
Q 024659          194 NPRLSCFGLMKNSRDGR---SYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       194 ~~kl~dfg~~~~~~~~~---~~~~~~~y~aPE~~~~~~~-~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      .+||+|||++.......   ...+|+.|+|||++.+..+ +.++||||||+++|+|++|+.||...
T Consensus       168 ~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  233 (335)
T 3dls_A          168 TIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCEL  233 (335)
T ss_dssp             CEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSG
T ss_pred             cEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhH
Confidence            99999999998655433   3467999999999988876 78999999999999999999999753

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.8e-40  Score=277.43  Aligned_cols=197  Identities=20%  Similarity=0.266  Sum_probs=169.5

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChh--HHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      +.|++++.||+|+||.||++.+. +++.||+|++.......  .+.+.+|++++++++||||+++++++...+..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            56888999999999999999964 58899999987654322  4567899999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----  209 (264)
                      |+++++|.+++.  ....+++..+..++.|++.||.|||+. |++|+||||+||+++.++.++|+|||++......    
T Consensus        83 ~~~~~~l~~~~~--~~~~~~~~~~~~i~~~l~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  159 (311)
T 4agu_A           83 YCDHTVLHELDR--YQRGVPEHLVKSITWQTLQAVNFCHKH-NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY  159 (311)
T ss_dssp             CCSEEHHHHHHH--TSSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred             eCCCchHHHHHh--hhcCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccccc
Confidence            999999988876  455799999999999999999999999 9999999999999999999999999999765432    


Q ss_pred             CcccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ....++..|+|||++.+ ..++.++||||||+++++|++|..||....
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  207 (311)
T 4agu_A          160 DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKS  207 (311)
T ss_dssp             ------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence            23467899999999976 558999999999999999999999997654

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.4e-40  Score=284.67  Aligned_cols=200  Identities=22%  Similarity=0.314  Sum_probs=173.9

Q ss_pred             CccccccccCCCCCCCeEEEEEeC--------CCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcC-CCCCccccceeeEeC
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEG  125 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~  125 (264)
                      .+.|.+.+.||+|+||.||++.+.        .+..||+|++...... ....+.+|+++++++ +||||+++++++...
T Consensus        68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  147 (382)
T 3tt0_A           68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD  147 (382)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence            356888899999999999999852        2457999999875433 346788999999999 899999999999999


Q ss_pred             CcceEEEecCCCCCHHHhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC
Q 024659          126 DERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD  191 (264)
Q Consensus       126 ~~~~lv~e~~~~~sL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~  191 (264)
                      +..++||||+++++|.+++....              ...+++..++.++.||+.||.|||+. +++||||||+||+++.
T Consensus       148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~  226 (382)
T 3tt0_A          148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTE  226 (382)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECT
T ss_pred             CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCcceEEEcC
Confidence            99999999999999999997533              24589999999999999999999999 9999999999999999


Q ss_pred             CCCeEEcccCCCcccCCC------CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          192 DVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       192 ~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ++.+||+|||++......      ....++..|+|||++.+..++.++||||||+++++|++ |..||....
T Consensus       227 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~  298 (382)
T 3tt0_A          227 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP  298 (382)
T ss_dssp             TCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             CCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            999999999999865432      22345688999999999999999999999999999999 888887543

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=1.5e-40  Score=278.56  Aligned_cols=196  Identities=19%  Similarity=0.189  Sum_probs=167.5

Q ss_pred             ccccc-ccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEEEec
Q 024659           58 MENIV-SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        58 ~~~~l-~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      .|+++ +.||+|+||.||++. ..+++.||+|++..........+.+|++++.++ +||||+++++++.+.+..++||||
T Consensus        13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~   92 (316)
T 2ac3_A           13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEK   92 (316)
T ss_dssp             SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEc
Confidence            46665 568999999999999 457889999999876655567889999999985 799999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCC---eEEcccCCCcccCCC--
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN---PRLSCFGLMKNSRDG--  209 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~---~kl~dfg~~~~~~~~--  209 (264)
                      +++++|.+++..  ...+++..+..++.||+.||.|||++ +++||||||+||+++.++.   +||+|||++......  
T Consensus        93 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~  169 (316)
T 2ac3_A           93 MRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNK-GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD  169 (316)
T ss_dssp             CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------
T ss_pred             CCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC-CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCc
Confidence            999999999964  35689999999999999999999999 9999999999999987765   999999998754321  


Q ss_pred             ---------CcccccccccccccccC-----CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 ---------RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ---------~~~~~~~~y~aPE~~~~-----~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                               ....+|..|+|||++.+     ..++.++||||||+++|+|++|+.||....
T Consensus       170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~  230 (316)
T 2ac3_A          170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRC  230 (316)
T ss_dssp             ------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred             cccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccc
Confidence                     12347899999999975     458899999999999999999999997643

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=1.2e-40  Score=288.09  Aligned_cols=195  Identities=16%  Similarity=0.156  Sum_probs=161.9

Q ss_pred             Ccccccc-ccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHh-cCCCCCccccceeeEe----CCcc
Q 024659           56 FAMENIV-SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVG-QLRNRRLANLLGCCCE----GDER  128 (264)
Q Consensus        56 ~~~~~~l-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~-~l~h~~i~~~~~~~~~----~~~~  128 (264)
                      ++.|.++ +.||.|+||+||++.+ .+++.||+|++..     ...+.+|++++. ..+|+||+++++++..    ....
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~  134 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL  134 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence            3456666 5789999999999995 4688999999963     245667888874 4589999999999875    4568


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC---CCCeEEcccCCCcc
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKN  205 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~---~~~~kl~dfg~~~~  205 (264)
                      ++||||+.+++|.+++.......+++..+..++.||+.||.|||+. +++||||||+||+++.   ++.+||+|||+++.
T Consensus       135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~  213 (400)
T 1nxk_A          135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE  213 (400)
T ss_dssp             EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCcCcceEEEecCCCCccEEEEecccccc
Confidence            9999999999999999754445799999999999999999999999 9999999999999997   78999999999986


Q ss_pred             cCCC---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          206 SRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       206 ~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ....   ....+|+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       214 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  267 (400)
T 1nxk_A          214 TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH  267 (400)
T ss_dssp             CC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCT
T ss_pred             cCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCc
Confidence            5432   34467899999999998899999999999999999999999997654

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=1.7e-40  Score=272.03  Aligned_cols=199  Identities=20%  Similarity=0.297  Sum_probs=172.9

Q ss_pred             CCccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeC--CcceE
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLL  130 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~l  130 (264)
                      .++.|++++.||+|+||.||++.+. +..||+|.+....  ....+.+.+|+.++++++||||+++++++.+.  ...++
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l   86 (271)
T 3kmu_A            8 DFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL   86 (271)
T ss_dssp             CGGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred             CHHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence            4567889999999999999999986 6789999998654  23345789999999999999999999999876  67899


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC--ceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~--i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      ||||+++++|.+++.......+++..++.++.|++.||.|||+. +  ++|+||||+||+++.++.++|+|||+..... 
T Consensus        87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~-  164 (271)
T 3kmu_A           87 ITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ-  164 (271)
T ss_dssp             EEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS-
T ss_pred             eecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceeeec-
Confidence            99999999999999764445689999999999999999999999 8  9999999999999999999999888765432 


Q ss_pred             CCcccccccccccccccCCCCCC---ccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 GRSYSTNLAFTPPEYLRTGRVTP---ESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 ~~~~~~~~~y~aPE~~~~~~~~~---~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .....+|+.|+|||.+.+..++.   ++||||||+++|||++|+.||....
T Consensus       165 ~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~  215 (271)
T 3kmu_A          165 SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS  215 (271)
T ss_dssp             CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC
T ss_pred             ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC
Confidence            33456789999999998766544   7999999999999999999997543

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.6e-40  Score=271.76  Aligned_cols=199  Identities=24%  Similarity=0.339  Sum_probs=176.1

Q ss_pred             CCccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      +.+.|++++.||+|+||.||++.+.++..||+|.+..... ..+.+.+|++++++++||||+++++++...+..++||||
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (267)
T 3t9t_A            6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF   84 (267)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred             chhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence            3466888999999999999999988888999999987653 346789999999999999999999999998899999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-----
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----  209 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-----  209 (264)
                      +++++|.+++.. ....+++..+..++.|++.||.|||++ +++|+||||+||+++.++.++|+|||++......     
T Consensus        85 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~  162 (267)
T 3t9t_A           85 MEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS  162 (267)
T ss_dssp             CTTCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred             CCCCcHHHHHhh-CcccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence            999999999965 345689999999999999999999999 9999999999999999999999999998765332     


Q ss_pred             CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ....++..|+|||.+.+..++.++||||||+++|+|++ |+.||....
T Consensus       163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~  210 (267)
T 3t9t_A          163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS  210 (267)
T ss_dssp             TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred             ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC
Confidence            23455678999999998889999999999999999999 888887543

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=1e-40  Score=281.09  Aligned_cols=188  Identities=17%  Similarity=0.217  Sum_probs=150.3

Q ss_pred             ccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC-CCCccccceeeEeCCcceEEEecCCCCCH
Q 024659           63 SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMPNDTL  140 (264)
Q Consensus        63 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~sL  140 (264)
                      +.||+|+||.||++.+ .+++.||+|.+...   ....+.+|+.+++.+. ||||+++++++.+....++||||+++++|
T Consensus        17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   93 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL   93 (325)
T ss_dssp             CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence            5689999999999996 46889999999653   3456778999999997 99999999999999999999999999999


Q ss_pred             HHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC---CeEEcccCCCcccCCC----Cccc
Q 024659          141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSCFGLMKNSRDG----RSYS  213 (264)
Q Consensus       141 ~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~---~~kl~dfg~~~~~~~~----~~~~  213 (264)
                      .+++..  ...+++..+..++.|++.||.|||++ +++||||||+||+++.++   .+||+|||++......    ....
T Consensus        94 ~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  170 (325)
T 3kn6_A           94 FERIKK--KKHFSETEASYIMRKLVSAVSHMHDV-GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC  170 (325)
T ss_dssp             HHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------
T ss_pred             HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccC
Confidence            999974  45799999999999999999999999 999999999999997655   7999999999765432    2345


Q ss_pred             ccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       214 ~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      +|+.|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus       171 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  213 (325)
T 3kn6_A          171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHD  213 (325)
T ss_dssp             -------------CCCCHHHHHHHHHHHHHHHHHSSCTTC---
T ss_pred             CCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCc
Confidence            6899999999998899999999999999999999999997543

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.5e-40  Score=273.71  Aligned_cols=201  Identities=17%  Similarity=0.232  Sum_probs=157.9

Q ss_pred             CCCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC---hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcce
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  129 (264)
                      ..+..|++.+.||+|+||.||++.. .+++.||+|.+.....   ...+.+.+|+.++++++||||+++++++.+.+..+
T Consensus         8 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   87 (278)
T 3cok_A            8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVY   87 (278)
T ss_dssp             SSGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEE
T ss_pred             cccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEE
Confidence            4456788999999999999999995 5788999999964321   12466889999999999999999999999999999


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~  209 (264)
                      +|+||+++++|.+++.. ....+++..+..++.|++.||.|||++ +++|+||||+||+++.++.++|+|||++......
T Consensus        88 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~  165 (278)
T 3cok_A           88 LVLEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSH-GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP  165 (278)
T ss_dssp             EEEECCTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred             EEEecCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence            99999999999999864 346789999999999999999999999 9999999999999999999999999998765432


Q ss_pred             ----CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ----~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                          ....+++.|+|||.+.+..++.++||||||+++++|++|+.||....
T Consensus       166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  216 (278)
T 3cok_A          166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDT  216 (278)
T ss_dssp             --------------------------CTHHHHHHHHHHHHHHSSCSSCCCS
T ss_pred             CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChh
Confidence                23467899999999998889999999999999999999999997543

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=1.8e-40  Score=272.19  Aligned_cols=197  Identities=21%  Similarity=0.272  Sum_probs=163.4

Q ss_pred             CCccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCCh----hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP----DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      .+..|++.+.||+|+||.||++.+. +..||+|++......    ..+.+.+|+++++.++||||+++++++...+..++
T Consensus         5 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (271)
T 3dtc_A            5 DFAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL   83 (271)
T ss_dssp             CTTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred             chhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence            4567888999999999999999975 678999998764322    24678899999999999999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC---ceeeccCCCCeeeCC--------CCCeEEcc
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER---ALYHDLNAYRIVFDD--------DVNPRLSC  199 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~---i~H~dl~~~Nil~~~--------~~~~kl~d  199 (264)
                      ||||+++++|.+++.   ...+++..++.++.|++.||.|||++ +   ++|+||||+||+++.        ++.++|+|
T Consensus        84 v~e~~~~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~-~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D  159 (271)
T 3dtc_A           84 VMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDE-AIVPIIHRDLKSSNILILQKVENGDLSNKILKITD  159 (271)
T ss_dssp             EEECCTTEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHS-SSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred             EEEcCCCCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence            999999999999984   45799999999999999999999999 8   899999999999986        67899999


Q ss_pred             cCCCcccCCC--CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          200 FGLMKNSRDG--RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       200 fg~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ||++......  ....+++.|+|||.+.+..++.++||||||+++++|++|+.||....
T Consensus       160 fg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~  218 (271)
T 3dtc_A          160 FGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID  218 (271)
T ss_dssp             CCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC
T ss_pred             CCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            9998754432  23467899999999998889999999999999999999999997643

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=7.9e-41  Score=293.57  Aligned_cols=198  Identities=25%  Similarity=0.373  Sum_probs=170.3

Q ss_pred             CccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      .+.+++.++||+|+||.||+|.+.++..||+|.++... ...+.+.+|++++++++||||+++++++.. +..++||||+
T Consensus       183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~  260 (452)
T 1fmk_A          183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM  260 (452)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred             hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence            35577888999999999999998888889999998654 345679999999999999999999999865 6789999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-----C
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R  210 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-----~  210 (264)
                      ++++|.+++.......+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||+++.....     .
T Consensus       261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~  339 (452)
T 1fmk_A          261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ  339 (452)
T ss_dssp             TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCCTTC-----------
T ss_pred             cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChhhEEECCCCCEEECCCccceecCCCceeccc
Confidence            999999999643345689999999999999999999999 9999999999999999999999999999865432     1


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ...++..|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus       340 ~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~  386 (452)
T 1fmk_A          340 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV  386 (452)
T ss_dssp             ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred             CCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCC
Confidence            2345678999999998899999999999999999999 888887543

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=1.5e-40  Score=278.17  Aligned_cols=201  Identities=21%  Similarity=0.294  Sum_probs=173.9

Q ss_pred             CccccccccCCCCCCCeEEEEEe------CCCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcc
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  128 (264)
                      ...|.+.+.||+|+||.||++.+      .++..||+|.+..... ...+.+.+|++++++++||||+++++++...+..
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  101 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL  101 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence            35578888999999999999985      2357899999986543 3356788999999999999999999999999999


Q ss_pred             eEEEecCCCCCHHHhhhcCCC----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWET----------------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR  186 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~----------------------~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~N  186 (264)
                      ++||||+++++|.+++.....                      ..+++..++.++.||+.||.|||++ +++|+||||+|
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~N  180 (314)
T 2ivs_A          102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM-KLVHRDLAARN  180 (314)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGG
T ss_pred             EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC-CCcccccchhe
Confidence            999999999999999975322                      3478999999999999999999999 99999999999


Q ss_pred             eeeCCCCCeEEcccCCCcccCCC------CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCcc
Q 024659          187 IVFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHVS  257 (264)
Q Consensus       187 il~~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~~  257 (264)
                      |+++.++.+||+|||++......      ....+++.|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus       181 Ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~  258 (314)
T 2ivs_A          181 ILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP  258 (314)
T ss_dssp             EEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred             EEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            99999999999999998765432      22345678999999998889999999999999999999 9999876543

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=1.1e-40  Score=285.08  Aligned_cols=196  Identities=14%  Similarity=0.156  Sum_probs=165.4

Q ss_pred             ccccccccCCCCCCCeEEEEEeCC------CCEEEEEEeCCCCChhH-----------HHHHHHHHHHhcCCCCCccccc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWPDA-----------RQFLEEARAVGQLRNRRLANLL  119 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~-----------~~~~~e~~~l~~l~h~~i~~~~  119 (264)
                      ..|++++.||+|+||.||++.+..      ++.||+|.+........           ..+..|+..+..++|+||++++
T Consensus        35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~  114 (364)
T 3op5_A           35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW  114 (364)
T ss_dssp             CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred             CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence            468899999999999999999754      47899999876542211           1234466677888999999999


Q ss_pred             eeeEeC----CcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeC--CCC
Q 024659          120 GCCCEG----DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD--DDV  193 (264)
Q Consensus       120 ~~~~~~----~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~--~~~  193 (264)
                      +++...    ...++||||+ +++|.+++.. ....+++..++.++.||+.||.|||++ +++||||||+||+++  .++
T Consensus       115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~-~iiHrDlkp~Nill~~~~~~  191 (364)
T 3op5_A          115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEH-EYVHGDIKASNLLLNYKNPD  191 (364)
T ss_dssp             EEEEEEETTEEEEEEEEECE-EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEESSCTT
T ss_pred             eeeeeccCCcceEEEEEeCC-CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeEEecCCHHHEEEecCCCC
Confidence            998774    4489999999 9999999975 446799999999999999999999999 999999999999999  889


Q ss_pred             CeEEcccCCCcccCCC-----------CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          194 NPRLSCFGLMKNSRDG-----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       194 ~~kl~dfg~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      .+||+|||+++.....           ....+|+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus       192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~  264 (364)
T 3op5_A          192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDN  264 (364)
T ss_dssp             CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred             eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence            9999999999754321           2234899999999999989999999999999999999999999853

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=2.9e-40  Score=272.71  Aligned_cols=198  Identities=19%  Similarity=0.238  Sum_probs=173.8

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      .+.|++++.||+|+||.||++.+ .+++.||+|++....  ....+.+.+|+.++++++||||+++++++...+..++|+
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            45688999999999999999995 458899999997543  233466889999999999999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCC---eEEcccCCCcccCCC
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN---PRLSCFGLMKNSRDG  209 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~---~kl~dfg~~~~~~~~  209 (264)
                      ||+++++|.+.+..  ...+++..+..++.|++.||.|||++ +++|+||||+||+++.++.   +||+|||++......
T Consensus        85 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~  161 (284)
T 3kk8_A           85 DLVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS  161 (284)
T ss_dssp             CCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred             ecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence            99999999988863  35689999999999999999999999 9999999999999986554   999999999765543


Q ss_pred             C---cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 R---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ~---~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .   ...+++.|+|||++.+..++.++||||||+++++|++|+.||....
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~  211 (284)
T 3kk8_A          162 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED  211 (284)
T ss_dssp             CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc
Confidence            3   3467899999999999899999999999999999999999997554

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=2.4e-40  Score=289.03  Aligned_cols=192  Identities=17%  Similarity=0.196  Sum_probs=163.9

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeC-----Ccc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG-----DER  128 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~  128 (264)
                      +.|++++.||+|+||.||++.+ .+++.||+|++....  ....+.+.+|+.++++++|+||+++++++...     ...
T Consensus        26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~  105 (432)
T 3n9x_A           26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL  105 (432)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred             CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence            4588899999999999999995 558899999997643  23356788999999999999999999999765     568


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      ++||||+. ++|.+++.  ....+++..+..++.||+.||.|||+. |++||||||+||+++.++.+||+|||+++....
T Consensus       106 ~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~-givHrDlkp~NILl~~~~~~kL~DFGla~~~~~  181 (432)
T 3n9x_A          106 YIVLEIAD-SDLKKLFK--TPIFLTEEHIKTILYNLLLGENFIHES-GIIHRDLKPANCLLNQDCSVKVCDFGLARTINS  181 (432)
T ss_dssp             EEEEECCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred             EEEEecCC-cCHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence            99999986 58999996  456799999999999999999999999 999999999999999999999999999986532


Q ss_pred             C--------------------------Ccccccccccccccc-cCCCCCCccceechHHHHHHHHhCCCCC
Q 024659          209 G--------------------------RSYSTNLAFTPPEYL-RTGRVTPESVMYSFGTLLLDLLSGKHIP  252 (264)
Q Consensus       209 ~--------------------------~~~~~~~~y~aPE~~-~~~~~~~~~DiwslG~~l~el~~g~~~~  252 (264)
                      .                          ....+|+.|+|||++ ....++.++|||||||++|||++|..||
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~  252 (432)
T 3n9x_A          182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH  252 (432)
T ss_dssp             -----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred             cccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence            2                          345678999999986 4556999999999999999999854443

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.6e-40  Score=282.99  Aligned_cols=195  Identities=18%  Similarity=0.277  Sum_probs=164.7

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCC------c
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGD------E  127 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~  127 (264)
                      ..|++++.||+|+||.||++.+ .+++.||+|++.....  ...+.+.+|++++++++||||+++++++....      .
T Consensus        25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~  104 (367)
T 1cm8_A           25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD  104 (367)
T ss_dssp             SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred             ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence            4588899999999999999996 5689999999965432  23456889999999999999999999997653      4


Q ss_pred             ceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      .++||||+ +++|.+++..   ..+++..+..++.||+.||.|||+. |++||||||+||+++.++.+||+|||+++...
T Consensus       105 ~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  179 (367)
T 1cm8_A          105 FYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAA-GIIHRDLKPGNLAVNEDCELKILDFGLARQAD  179 (367)
T ss_dssp             CEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence            59999999 7799999864   4689999999999999999999999 99999999999999999999999999998654


Q ss_pred             C-CCcccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          208 D-GRSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       208 ~-~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      . .....+|..|+|||++.+ ..++.++|||||||+++||++|+.||....
T Consensus       180 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  230 (367)
T 1cm8_A          180 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD  230 (367)
T ss_dssp             SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            3 334578999999999987 569999999999999999999999997654

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=4.3e-40  Score=277.78  Aligned_cols=199  Identities=18%  Similarity=0.293  Sum_probs=170.7

Q ss_pred             CCccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChh--HHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      .++.|++++.||+|+||.||++.+. +++.||+|++.......  .+.+.+|+.++++++||||+++++++...+..++|
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  102 (331)
T 4aaa_A           23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV  102 (331)
T ss_dssp             CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence            3467899999999999999999964 58899999986554322  34578999999999999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--  209 (264)
                      |||+++++|.+++.  ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++......  
T Consensus       103 ~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  179 (331)
T 4aaa_A          103 FEFVDHTILDDLEL--FPNGLDYQVVQKYLFQIINGIGFCHSH-NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE  179 (331)
T ss_dssp             EECCSEEHHHHHHH--STTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred             EecCCcchHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHC-CEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence            99999998888765  445699999999999999999999999 9999999999999999999999999998764332  


Q ss_pred             --CcccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 --RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                        ....++..|+|||++.+. .++.++||||||+++|+|++|+.||....
T Consensus       180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  229 (331)
T 4aaa_A          180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDS  229 (331)
T ss_dssp             ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence              334678999999999876 68999999999999999999999997654

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.1e-40  Score=276.14  Aligned_cols=201  Identities=17%  Similarity=0.193  Sum_probs=166.5

Q ss_pred             hCCCccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCCh---hHHHHHHHHHHHhcCCCCCccccceeeEeCCcc
Q 024659           53 TSGFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (264)
Q Consensus        53 ~~~~~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  128 (264)
                      ...+..|++++.||+|+||.||++.+. +++.||+|.+......   ..+.+.+|+.++++++||||+++++++...+..
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~  109 (309)
T 2h34_A           30 GTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQL  109 (309)
T ss_dssp             ----CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEE
T ss_pred             CcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeE
Confidence            344678999999999999999999964 6889999999754322   236688999999999999999999999999999


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      ++++||+++++|.+++..  ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++.....
T Consensus       110 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  186 (309)
T 2h34_A          110 YVDMRLINGVDLAAMLRR--QGPLAPPRAVAIVRQIGSALDAAHAA-GATHRDVKPENILVSADDFAYLVDFGIASATTD  186 (309)
T ss_dssp             EEEEECCCCEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECSCCC------
T ss_pred             EEEEEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-cCCcCCCChHHEEEcCCCCEEEecCccCccccc
Confidence            999999999999999963  35689999999999999999999999 999999999999999999999999999876543


Q ss_pred             C-----CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 G-----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 ~-----~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .     ....++..|+|||.+.+..++.++||||||+++|+|++|+.||....
T Consensus       187 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  239 (309)
T 2h34_A          187 EKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ  239 (309)
T ss_dssp             ----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH
T ss_pred             cccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch
Confidence            2     23467899999999998889999999999999999999999997654

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=1.6e-40  Score=274.79  Aligned_cols=199  Identities=23%  Similarity=0.350  Sum_probs=176.4

Q ss_pred             CccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      ...|++.+.||+|+||.||++.+. ++..||+|.+.... ...+.+.+|++++++++||||+++++++......++||||
T Consensus        12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   90 (288)
T 3kfa_A           12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   90 (288)
T ss_dssp             GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEc
Confidence            456788899999999999999965 48899999998654 3457789999999999999999999999998999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC----
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----  210 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~----  210 (264)
                      +.+++|.+++.......+++..++.++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......    
T Consensus        91 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  169 (288)
T 3kfa_A           91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH  169 (288)
T ss_dssp             CTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH-TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEE
T ss_pred             CCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC-CccCCCCCcceEEEcCCCCEEEccCccceeccCCccccc
Confidence            9999999999865667799999999999999999999999 99999999999999999999999999988654332    


Q ss_pred             -cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       211 -~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                       ...++..|+|||.+.+..++.++||||||+++|+|++ |..||....
T Consensus       170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~  217 (288)
T 3kfa_A          170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID  217 (288)
T ss_dssp             TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             cCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence             2234678999999998899999999999999999999 888887544

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=6.7e-41  Score=282.00  Aligned_cols=197  Identities=19%  Similarity=0.285  Sum_probs=165.3

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChhH-HHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      +.|.+++.||+|+||.||++... +++.||+|++........ ..+.+|++++++++||||+++++++...+..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            56889999999999999999964 688999999976442221 2355799999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----C
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R  210 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~  210 (264)
                      +++ +|.+++.. ....+++..+..++.|++.||.|||+. |++||||||+||+++.++.+||+|||++......    .
T Consensus        82 ~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~  158 (324)
T 3mtl_A           82 LDK-DLKQYLDD-CGNIINMHNVKLFLFQLLRGLAYCHRQ-KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYD  158 (324)
T ss_dssp             CSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEEESSCCGGGEEECTTCCEEECSSSEEECC--------
T ss_pred             ccc-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCcCHHHEEECCCCCEEEccCcccccccCCccccc
Confidence            975 89988865 455789999999999999999999999 9999999999999999999999999998754422    2


Q ss_pred             cccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ...+|..|+|||++.+ ..++.++||||||+++|+|++|+.||....
T Consensus       159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~  205 (324)
T 3mtl_A          159 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGST  205 (324)
T ss_dssp             ----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            3456899999999976 458999999999999999999999997654

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=8.5e-40  Score=270.40  Aligned_cols=196  Identities=22%  Similarity=0.371  Sum_probs=167.9

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChh-------HHHHHHHHHHHhcCCCCCccccceeeEeCCcc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD-------ARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  128 (264)
                      +.|++.+.||+|+||.||++.+ .+++.||+|.+.......       .+.+.+|++++++++||||+++++++.+.  .
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~   96 (287)
T 4f0f_A           19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP--P   96 (287)
T ss_dssp             TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT--T
T ss_pred             ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC--C
Confidence            5578888999999999999995 578899999997543222       15688999999999999999999998654  3


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC--ceeeccCCCCeeeCCCCC-----eEEcccC
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVN-----PRLSCFG  201 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~--i~H~dl~~~Nil~~~~~~-----~kl~dfg  201 (264)
                      ++||||+++++|.+.+.. ....+++..++.++.|++.||.|||+. +  ++|+||||+||+++.++.     +||+|||
T Consensus        97 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~-~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg  174 (287)
T 4f0f_A           97 RMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG  174 (287)
T ss_dssp             EEEEECCTTCBHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred             eEEEEecCCCCHHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhC-CCCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence            799999999999998864 456799999999999999999999999 9  999999999999987776     9999999


Q ss_pred             CCcccCCC-Cccccccccccccccc--CCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          202 LMKNSRDG-RSYSTNLAFTPPEYLR--TGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       202 ~~~~~~~~-~~~~~~~~y~aPE~~~--~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ++...... ....+++.|+|||++.  ...++.++||||||+++|+|++|+.||....
T Consensus       175 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~  232 (287)
T 4f0f_A          175 LSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS  232 (287)
T ss_dssp             TCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             ccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccc
Confidence            98754433 3356789999999984  3457899999999999999999999997543

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=2.2e-40  Score=276.24  Aligned_cols=197  Identities=15%  Similarity=0.164  Sum_probs=171.6

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      ..|.+++.||+|+||.||++.. .+++.||+|.+........+.+.+|++++++++||||+++++++...+..++||||+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV   88 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence            4578889999999999999995 468899999998765444567889999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeee---CCCCCeEEcccCCCcccCCC--C
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDG--R  210 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~---~~~~~~kl~dfg~~~~~~~~--~  210 (264)
                      ++++|.+++..  ...+++..+..++.|++.||.|||+. +++|+||||+||++   +.++.++|+|||++......  .
T Consensus        89 ~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~  165 (304)
T 2jam_A           89 SGGELFDRILE--RGVYTEKDASLVIQQVLSAVKYLHEN-GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS  165 (304)
T ss_dssp             CSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTH
T ss_pred             CCccHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccc
Confidence            99999998863  34689999999999999999999999 99999999999999   67899999999998764432  2


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ...+++.|+|||.+.+..++.++||||||+++|+|++|..||....
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  211 (304)
T 2jam_A          166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET  211 (304)
T ss_dssp             HHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             cccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence            2357899999999998889999999999999999999999997654

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=2.3e-40  Score=275.46  Aligned_cols=190  Identities=17%  Similarity=0.225  Sum_probs=161.5

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhc--CCCCCccccceeeEeC----CcceE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQ--LRNRRLANLLGCCCEG----DERLL  130 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~~i~~~~~~~~~~----~~~~l  130 (264)
                      +.|++++.||+|+||.||++.+ +++.||+|++...   ....+..|.+++..  ++||||+++++++...    ...++
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l   83 (301)
T 3q4u_A            8 RDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL   83 (301)
T ss_dssp             GGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred             CcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence            4688899999999999999988 5779999999753   33445566666665  7999999999997653    35789


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCceeeccCCCCeeeCCCCCeEEcccCC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT--------SKERALYHDLNAYRIVFDDDVNPRLSCFGL  202 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh--------~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~  202 (264)
                      ||||+++++|.+++.   ...+++..++.++.|++.||.|||        +. +++||||||+||+++.++.+||+|||+
T Consensus        84 v~e~~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfg~  159 (301)
T 3q4u_A           84 ITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP-AIAHRDLKSKNILVKKNGQCCIADLGL  159 (301)
T ss_dssp             EECCCTTCBHHHHHT---TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC-EEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             ehhhccCCCHHHHHh---hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC-CeecCCCChHhEEEcCCCCEEEeeCCC
Confidence            999999999999994   457999999999999999999999        88 999999999999999999999999999


Q ss_pred             CcccCCC--------CcccccccccccccccCC------CCCCccceechHHHHHHHHhC----------CCCCCC
Q 024659          203 MKNSRDG--------RSYSTNLAFTPPEYLRTG------RVTPESVMYSFGTLLLDLLSG----------KHIPPS  254 (264)
Q Consensus       203 ~~~~~~~--------~~~~~~~~y~aPE~~~~~------~~~~~~DiwslG~~l~el~~g----------~~~~~~  254 (264)
                      +......        ....+|+.|+|||++.+.      .+++++||||||+++|||++|          +.||..
T Consensus       160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~  235 (301)
T 3q4u_A          160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD  235 (301)
T ss_dssp             CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred             eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccc
Confidence            8754332        223689999999999876      455789999999999999999          888854

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=4.3e-40  Score=273.38  Aligned_cols=194  Identities=18%  Similarity=0.181  Sum_probs=171.0

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEEEec
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      +.|++++.||+|+||.||++.. .+++.||+|++....  ..+.+.+|+..++++ +|+|++++++++......++|+||
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~   87 (298)
T 1csn_A           10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL   87 (298)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence            4578889999999999999995 678999999987543  234577899999999 799999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCC-----eEEcccCCCcccCCC
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN-----PRLSCFGLMKNSRDG  209 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~-----~kl~dfg~~~~~~~~  209 (264)
                      + +++|.+++.. ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.     +||+|||++......
T Consensus        88 ~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~  164 (298)
T 1csn_A           88 L-GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP  164 (298)
T ss_dssp             C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred             c-CCCHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence            9 8899999975 345699999999999999999999999 9999999999999987765     999999999765432


Q ss_pred             -----------CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 -----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 -----------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                                 ....+|+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus       165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  221 (298)
T 1csn_A          165 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL  221 (298)
T ss_dssp             TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             cccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchh
Confidence                       2346789999999999988999999999999999999999999764

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=3.1e-40  Score=276.38  Aligned_cols=193  Identities=18%  Similarity=0.149  Sum_probs=163.4

Q ss_pred             cccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCCh--hHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEEEe
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP--DARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      .|+++++||+|+||+||+|.+. +++.||+|++......  .......|+..+.++ +|+||+++++++.+.+..++|||
T Consensus        58 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e  137 (311)
T 3p1a_A           58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTE  137 (311)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             heeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEe
Confidence            4788889999999999999965 7899999998764322  233445555555555 89999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---C
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---R  210 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---~  210 (264)
                      |+ +++|.+++.. ....+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||++......   .
T Consensus       138 ~~-~~~L~~~~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  214 (311)
T 3p1a_A          138 LC-GPSLQQHCEA-WGASLPEAQVWGYLRDTLLALAHLHSQ-GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGE  214 (311)
T ss_dssp             CC-CCBHHHHHHH-HCSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECGGGCEEECCCTTCEECC------
T ss_pred             cc-CCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCc
Confidence            99 6689988865 345799999999999999999999999 9999999999999999999999999998765432   2


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      ...+|+.|+|||++.+ .++.++||||||+++|||++|..+|..
T Consensus       215 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~  257 (311)
T 3p1a_A          215 VQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHG  257 (311)
T ss_dssp             CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSS
T ss_pred             ccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            3457899999999875 789999999999999999999877754

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=1.9e-40  Score=273.30  Aligned_cols=199  Identities=20%  Similarity=0.310  Sum_probs=172.2

Q ss_pred             CCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC---hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      .++.|++++.||+|+||.||++.+ .++..||+|.+.....   .....+.+|+.++++++||||+++++++.+....++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   86 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL   86 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence            346688999999999999999995 4578999999865321   123568899999999999999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-  209 (264)
                      ||||+++++|.+++..  ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++...... 
T Consensus        87 v~e~~~~~~l~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~-~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~  163 (279)
T 3fdn_A           87 ILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR  163 (279)
T ss_dssp             EECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTT-TCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred             EEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CEecccCChHhEEEcCCCCEEEEeccccccCCccc
Confidence            9999999999999863  34689999999999999999999999 9999999999999999999999999988654332 


Q ss_pred             -CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 -~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                       ....++..|+|||.+.+..++.++||||||+++++|++|..||....
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  211 (279)
T 3fdn_A          164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT  211 (279)
T ss_dssp             ----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc
Confidence             34567899999999998889999999999999999999999997654

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.2e-40  Score=280.92  Aligned_cols=194  Identities=18%  Similarity=0.216  Sum_probs=166.6

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCC--CCccccceeeEeCCcceEEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRN--RRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~  132 (264)
                      ..|++++.||+|+||.||++...+++.||+|++.....  ...+.+.+|+.++.+++|  +||+++++++......++||
T Consensus         9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~   88 (343)
T 3dbq_A            9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM   88 (343)
T ss_dssp             CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence            45889999999999999999988899999999975432  234678899999999986  99999999999999999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---  209 (264)
                      |+ .+++|.+++..  ...+++..+..++.||+.||.|||++ +++||||||+||+++ ++.+||+|||++......   
T Consensus        89 e~-~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~  163 (343)
T 3dbq_A           89 EC-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS  163 (343)
T ss_dssp             CC-CSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred             eC-CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence            95 57799999974  45789999999999999999999999 999999999999997 678999999999865432   


Q ss_pred             ---CcccccccccccccccC-----------CCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 ---RSYSTNLAFTPPEYLRT-----------GRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 ---~~~~~~~~y~aPE~~~~-----------~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                         ....+|+.|+|||++.+           ..++.++||||||+++|||++|+.||...
T Consensus       164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  223 (343)
T 3dbq_A          164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI  223 (343)
T ss_dssp             ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhh
Confidence               23468999999999865           56889999999999999999999999754

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=2.8e-40  Score=272.83  Aligned_cols=197  Identities=17%  Similarity=0.195  Sum_probs=172.5

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA--WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      +.|++++.||+|+||.||++.+. +++.||+|.+....  ......+.+|+..+.++ +||||+++++++.+.+..++||
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~   90 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN   90 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            35788899999999999999964 68999999998643  33456688899999999 8999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC------------------
Q 024659          133 EYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD------------------  192 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~------------------  192 (264)
                      ||+++++|.+++....  ...+++..++.++.||+.||.|||++ +++|+||||+||+++.+                  
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~  169 (289)
T 1x8b_A           91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM-SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN  169 (289)
T ss_dssp             ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEC--------------------
T ss_pred             EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC-CEeecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence            9999999999996421  25689999999999999999999999 99999999999999844                  


Q ss_pred             -CCeEEcccCCCcccCCCCcccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCC
Q 024659          193 -VNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       193 -~~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                       ..++|+|||.+..........++..|+|||++.+. .+++++||||||+++++|++|.+++..
T Consensus       170 ~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~  233 (289)
T 1x8b_A          170 KVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRN  233 (289)
T ss_dssp             CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSS
T ss_pred             ceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcc
Confidence             47999999999887777777899999999999876 467899999999999999999987654

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=3.1e-40  Score=272.76  Aligned_cols=201  Identities=18%  Similarity=0.259  Sum_probs=175.9

Q ss_pred             hCCCccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcc
Q 024659           53 TSGFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (264)
Q Consensus        53 ~~~~~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  128 (264)
                      .-..+.|++++.||+|+||.||++... ++..||+|.+....   ......+.+|++++++++|+||+++++++.+.+..
T Consensus        10 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   89 (284)
T 2vgo_A           10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRI   89 (284)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             chhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEE
Confidence            344567899999999999999999964 57889999986432   11245688999999999999999999999999999


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      ++|+||+++++|.+++..  ...+++..+..++.|++.||.|||++ +++|+||+|+||+++.++.++|+|||++.....
T Consensus        90 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~  166 (284)
T 2vgo_A           90 YLMLEFAPRGELYKELQK--HGRFDEQRSATFMEELADALHYCHER-KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS  166 (284)
T ss_dssp             EEEECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECTTCCEEECCCTTCEECSS
T ss_pred             EEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEEcCCCCEEEecccccccCcc
Confidence            999999999999999864  34689999999999999999999999 999999999999999999999999999875443


Q ss_pred             --CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 --GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 --~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                        .....++..|+|||++.+..++.++||||||+++++|++|..||....
T Consensus       167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  216 (284)
T 2vgo_A          167 LRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS  216 (284)
T ss_dssp             SCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             cccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC
Confidence              234567899999999999889999999999999999999999997543

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=1e-40  Score=284.34  Aligned_cols=202  Identities=20%  Similarity=0.284  Sum_probs=171.8

Q ss_pred             CCCccccccccCCCCCCCeEEEEEe------CCCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcC-CCCCccccceeeEeC
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEG  125 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~  125 (264)
                      -..+.|++++.||+|+||.||++.+      .+++.||+|++...... ..+.+.+|++++.++ +||||+++++++...
T Consensus        19 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~   98 (359)
T 3vhe_A           19 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP   98 (359)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred             ccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecC
Confidence            3456688899999999999999973      23579999999875433 345689999999999 789999999999875


Q ss_pred             Cc-ceEEEecCCCCCHHHhhhcCCC-------------------------------------------------------
Q 024659          126 DE-RLLVAEYMPNDTLAKHLFHWET-------------------------------------------------------  149 (264)
Q Consensus       126 ~~-~~lv~e~~~~~sL~~~l~~~~~-------------------------------------------------------  149 (264)
                      +. .++||||+++++|.+++.....                                                       
T Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (359)
T 3vhe_A           99 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEE  178 (359)
T ss_dssp             TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------------
T ss_pred             CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhh
Confidence            54 8999999999999999975321                                                       


Q ss_pred             ---------CCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC------Ccccc
Q 024659          150 ---------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------RSYST  214 (264)
Q Consensus       150 ---------~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~------~~~~~  214 (264)
                               ..+++..++.++.|++.||.|||++ +++||||||+||+++.++.+||+|||++......      ....+
T Consensus       179 ~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~-~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  257 (359)
T 3vhe_A          179 EEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL  257 (359)
T ss_dssp             -----CTTTTCBCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEE
T ss_pred             cccccchhccccCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCC
Confidence                     1288999999999999999999999 9999999999999999999999999999765332      22346


Q ss_pred             cccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       215 ~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      |..|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus       258 t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~  300 (359)
T 3vhe_A          258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK  300 (359)
T ss_dssp             CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             CceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccc
Confidence            788999999998899999999999999999998 999997644

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.2e-40  Score=282.42  Aligned_cols=198  Identities=21%  Similarity=0.201  Sum_probs=166.2

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCC-----CChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS-----AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      .|++++.||+|+||.||++.+ .++..||+|.+...     .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus        27 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  106 (345)
T 3hko_A           27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLV  106 (345)
T ss_dssp             HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             heeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEE
Confidence            478888899999999999995 56889999998643     233456789999999999999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCC--------------------------------------CCCCCHHHHHHHHHHHHHHHHHHhc
Q 024659          132 AEYMPNDTLAKHLFHWE--------------------------------------TQPMKWAMRLRVALHIAEALEYCTS  173 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~--------------------------------------~~~~~~~~~~~i~~qi~~~l~~lh~  173 (264)
                      |||+++++|.+++....                                      ...+++..++.++.||+.||.|||+
T Consensus       107 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~  186 (345)
T 3hko_A          107 MELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN  186 (345)
T ss_dssp             EECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999884210                                      1123567788999999999999999


Q ss_pred             CCCceeeccCCCCeeeCCCC--CeEEcccCCCcccCC--------CCcccccccccccccccC--CCCCCccceechHHH
Q 024659          174 KERALYHDLNAYRIVFDDDV--NPRLSCFGLMKNSRD--------GRSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTL  241 (264)
Q Consensus       174 ~~~i~H~dl~~~Nil~~~~~--~~kl~dfg~~~~~~~--------~~~~~~~~~y~aPE~~~~--~~~~~~~DiwslG~~  241 (264)
                      + +++|+||||+||+++.++  .+||+|||++.....        .....+|+.|+|||++.+  ..++.++||||||++
T Consensus       187 ~-~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~i  265 (345)
T 3hko_A          187 Q-GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL  265 (345)
T ss_dssp             T-TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHH
T ss_pred             C-CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHH
Confidence            9 999999999999998766  899999999975422        234467899999999975  568999999999999


Q ss_pred             HHHHHhCCCCCCCCc
Q 024659          242 LLDLLSGKHIPPSHV  256 (264)
Q Consensus       242 l~el~~g~~~~~~~~  256 (264)
                      +|||++|+.||....
T Consensus       266 l~el~~g~~pf~~~~  280 (345)
T 3hko_A          266 LHLLLMGAVPFPGVN  280 (345)
T ss_dssp             HHHHHHSSCSSCCSS
T ss_pred             HHHHHHCCCCCCCCC
Confidence            999999999997543

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=2.6e-40  Score=278.07  Aligned_cols=200  Identities=20%  Similarity=0.311  Sum_probs=159.6

Q ss_pred             ccccccccCCCCCCCeEEEEEeCC-C---CEEEEEEeCCC--CChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcc--
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLEN-Q---FRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--  128 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~--  128 (264)
                      ..|++++.||+|+||.||++.+.. +   ..||+|.+...  .....+.+.+|++++++++||||+++++++......  
T Consensus        23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  102 (323)
T 3qup_A           23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR  102 (323)
T ss_dssp             --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-----
T ss_pred             hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccC
Confidence            457888899999999999999544 3   27999999865  334567799999999999999999999999876554  


Q ss_pred             ----eEEEecCCCCCHHHhhhcCC----CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEccc
Q 024659          129 ----LLVAEYMPNDTLAKHLFHWE----TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF  200 (264)
Q Consensus       129 ----~lv~e~~~~~sL~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~df  200 (264)
                          ++|+||+.+++|.+++....    ...+++..++.++.|++.||.|||++ +++||||||+||+++.++.+||+||
T Consensus       103 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~ivH~Dikp~NIli~~~~~~kl~Df  181 (323)
T 3qup_A          103 LPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR-NFIHRDLAARNCMLAEDMTVCVADF  181 (323)
T ss_dssp             --CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTSCEEECCC
T ss_pred             CCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC-CcccCCCCcceEEEcCCCCEEEeec
Confidence                89999999999999985321    22589999999999999999999999 9999999999999999999999999


Q ss_pred             CCCcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCcc
Q 024659          201 GLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHVS  257 (264)
Q Consensus       201 g~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~~  257 (264)
                      |++.......      ...+++.|+|||.+.+..++.++||||||+++|+|++ |..||.....
T Consensus       182 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~  245 (323)
T 3qup_A          182 GLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN  245 (323)
T ss_dssp             CC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG
T ss_pred             cccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh
Confidence            9997653322      2345678999999999999999999999999999999 8888875443

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=1.2e-39  Score=277.04  Aligned_cols=198  Identities=18%  Similarity=0.238  Sum_probs=169.8

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh--hHHHHHHHHHHHhcCCCCCccccceeeEeC-------
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEG-------  125 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-------  125 (264)
                      .+.|++++.||+|+||.||++.+ .+++.||+|++......  ....+.+|++++++++|+||+++++++...       
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            46789999999999999999996 57899999998754322  245678999999999999999999999773       


Q ss_pred             -CcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCc
Q 024659          126 -DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (264)
Q Consensus       126 -~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~  204 (264)
                       +..++||||+.+ +|.+.+.. ....+++..++.++.|++.||.|||++ |++||||||+||+++.++.+||+|||++.
T Consensus        96 ~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~  172 (351)
T 3mi9_A           96 KGSIYLVFDFCEH-DLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLITRDGVLKLADFGLAR  172 (351)
T ss_dssp             -CEEEEEEECCSE-EHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred             CceEEEEEeccCC-CHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence             458999999976 68777754 345699999999999999999999999 99999999999999999999999999987


Q ss_pred             ccCC--------CCcccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          205 NSRD--------GRSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       205 ~~~~--------~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ....        .....+|+.|+|||++.+. .++.++||||||+++|+|++|++||....
T Consensus       173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  233 (351)
T 3mi9_A          173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT  233 (351)
T ss_dssp             ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCC
Confidence            5432        1234568999999999764 48999999999999999999999997654

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=2.4e-40  Score=272.67  Aligned_cols=198  Identities=25%  Similarity=0.381  Sum_probs=172.6

Q ss_pred             CccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      .+.|++++.||+|+||.||++...++..||+|.+.... ...+.+.+|++++++++||||+++++++. .+..++|+||+
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~   89 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM   89 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred             HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence            35688899999999999999998888899999997654 34567899999999999999999999886 45689999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC-----
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----  210 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-----  210 (264)
                      ++++|.+++.......+++..+..++.|++.||.|||++ +++|+||||+||++++++.++|+|||++.......     
T Consensus        90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  168 (279)
T 1qpc_A           90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE  168 (279)
T ss_dssp             TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred             CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHhhEEEcCCCCEEECCCcccccccCccccccc
Confidence            999999998642233689999999999999999999999 99999999999999999999999999998654332     


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ...++..|+|||.+.+..++.++||||||++++||++ |..||....
T Consensus       169 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~  215 (279)
T 1qpc_A          169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT  215 (279)
T ss_dssp             TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred             CCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC
Confidence            2345678999999988889999999999999999999 888886543

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=2e-40  Score=279.69  Aligned_cols=199  Identities=18%  Similarity=0.272  Sum_probs=165.5

Q ss_pred             CCCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChh--HHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      ...+.|++++.||+|+||.||++.+ .+++.||+|++.......  .+.+.+|++++++++||||+++++++.+.+..++
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  110 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL  110 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred             cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence            4456789999999999999999994 568899999997654222  3457789999999999999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeC-----CCCCeEEcccCCCcc
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-----DDVNPRLSCFGLMKN  205 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~-----~~~~~kl~dfg~~~~  205 (264)
                      ||||+++ +|.+++..  ...+++..+..++.||+.||.|||++ +++||||||+||+++     .++.+||+|||++..
T Consensus       111 v~e~~~~-~L~~~~~~--~~~~~~~~~~~i~~ql~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~  186 (329)
T 3gbz_A          111 IFEYAEN-DLKKYMDK--NPDVSMRVIKSFLYQLINGVNFCHSR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA  186 (329)
T ss_dssp             EEECCSE-EHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred             EEecCCC-CHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence            9999975 89999873  44689999999999999999999999 999999999999994     455699999999875


Q ss_pred             cCCC----CcccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          206 SRDG----RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       206 ~~~~----~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ....    ....+|..|+|||++.+.. ++.++||||||+++|||++|+.||....
T Consensus       187 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  242 (329)
T 3gbz_A          187 FGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS  242 (329)
T ss_dssp             HC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCC
Confidence            4322    3345689999999998754 8999999999999999999999997654

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=4e-40  Score=271.73  Aligned_cols=198  Identities=20%  Similarity=0.255  Sum_probs=162.0

Q ss_pred             CccccccccCCCCCCCeEEEEEeCC----CCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      ...|++.+.||+|+||.||++.+..    +..||+|.+...... ..+.+.+|+.++++++||||+++++++ ..+..++
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~l   92 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWI   92 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEE
Confidence            3568888999999999999998643    457999998865433 345688999999999999999999998 4567899


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~  210 (264)
                      ||||+++++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++.......
T Consensus        93 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  170 (281)
T 1mp8_A           93 IMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST  170 (281)
T ss_dssp             EEECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred             EEecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecccccHHHEEECCCCCEEECccccccccCccc
Confidence            9999999999999964 345689999999999999999999999 99999999999999999999999999987654322


Q ss_pred             -----cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          211 -----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       211 -----~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                           ...+++.|+|||.+.+..++.++||||||+++|||++ |..||....
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~  222 (281)
T 1mp8_A          171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK  222 (281)
T ss_dssp             --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred             ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCC
Confidence                 2245678999999998889999999999999999997 888887543

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=1.5e-39  Score=271.02  Aligned_cols=194  Identities=15%  Similarity=0.263  Sum_probs=173.8

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      .|++++.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.++++++|+||+++++++......++||||+
T Consensus        23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  102 (303)
T 3a7i_A           23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL  102 (303)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeC
Confidence            377888999999999999995 568899999997653 334577899999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----Cc
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS  211 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~~  211 (264)
                      ++++|.+++.   ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......    ..
T Consensus       103 ~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  178 (303)
T 3a7i_A          103 GGGSALDLLE---PGPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT  178 (303)
T ss_dssp             TTEEHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCC
T ss_pred             CCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCChheEEECCCCCEEEeecccceecCccccccCc
Confidence            9999999984   45789999999999999999999999 9999999999999999999999999998765432    23


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..++..|+|||++.+..++.++||||||+++++|++|+.||...
T Consensus       179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  222 (303)
T 3a7i_A          179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL  222 (303)
T ss_dssp             CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCc
Confidence            46789999999999888999999999999999999999998754

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.2e-39  Score=272.28  Aligned_cols=195  Identities=18%  Similarity=0.291  Sum_probs=164.0

Q ss_pred             CCccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      +++.|++.+.||+|+||.||++.+. ++.||+|.+....  ..+.+.+|++++++++||||+++++++.  +..++||||
T Consensus         6 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~   80 (307)
T 2eva_A            6 DYKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEY   80 (307)
T ss_dssp             CGGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSSTT--HHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEEC
T ss_pred             CHhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecChh--HHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEc
Confidence            4567888999999999999999975 5689999997543  4567899999999999999999999886  458999999


Q ss_pred             CCCCCHHHhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHhc---CCCceeeccCCCCeeeCCCCC-eEEcccCCCcccCC-
Q 024659          135 MPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTS---KERALYHDLNAYRIVFDDDVN-PRLSCFGLMKNSRD-  208 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lh~---~~~i~H~dl~~~Nil~~~~~~-~kl~dfg~~~~~~~-  208 (264)
                      +++++|.+++..... ..++...++.++.|++.||.|||+   + +++||||||+||+++.++. +||+|||++..... 
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~-~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~  159 (307)
T 2eva_A           81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK-ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH  159 (307)
T ss_dssp             CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSS-CCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred             CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCC-CeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence            999999999974322 247889999999999999999999   7 8999999999999998876 79999999875443 


Q ss_pred             CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          209 GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       209 ~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      .....++..|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~  206 (307)
T 2eva_A          160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI  206 (307)
T ss_dssp             -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTT
T ss_pred             cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhh
Confidence            23446889999999999889999999999999999999999999743

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=8.2e-41  Score=283.39  Aligned_cols=192  Identities=19%  Similarity=0.249  Sum_probs=167.1

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEEEec
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      +.|++++.||.|+||.||++.. .+++.||+|.+......    ..+|++++.++ +||||+++++++.+....++||||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~   97 (342)
T 2qr7_A           22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL   97 (342)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred             ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence            4588999999999999999995 46889999999765422    34688888887 799999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC----CCeEEcccCCCcccCCC-
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD----VNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~----~~~kl~dfg~~~~~~~~-  209 (264)
                      +.+++|.+.+.  ....+++..+..++.||+.||.|||++ |++||||||+||++.++    +.+||+|||++...... 
T Consensus        98 ~~gg~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~-givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~  174 (342)
T 2qr7_A           98 MKGGELLDKIL--RQKFFSEREASAVLFTITKTVEYLHAQ-GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN  174 (342)
T ss_dssp             CCSCBHHHHHH--TCTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred             CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence            99999999986  445799999999999999999999999 99999999999998533    35999999999865433 


Q ss_pred             ---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 ---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                         ....+|+.|+|||++.+..++.++||||||+++|||++|..||...
T Consensus       175 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~  223 (342)
T 2qr7_A          175 GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANG  223 (342)
T ss_dssp             CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred             CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCC
Confidence               2346789999999998878999999999999999999999999753

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.8e-40  Score=280.16  Aligned_cols=201  Identities=22%  Similarity=0.285  Sum_probs=170.7

Q ss_pred             CCccccccccCCCCCCCeEEEEEe------CCCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCC
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGD  126 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~  126 (264)
                      ..+.|++.+.||+|+||.||++.+      .++..||+|.+.... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  122 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  122 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence            345688889999999999999995      245689999998643 23356788999999999 8999999999999999


Q ss_pred             cceEEEecCCCCCHHHhhhcCCC---------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCC
Q 024659          127 ERLLVAEYMPNDTLAKHLFHWET---------------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY  185 (264)
Q Consensus       127 ~~~lv~e~~~~~sL~~~l~~~~~---------------------~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~  185 (264)
                      ..++||||+++++|.+++.....                     ..+++..++.++.||+.||.|||+. +++|+||||+
T Consensus       123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~  201 (344)
T 1rjb_A          123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK-SCVHRDLAAR  201 (344)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT-TEEETTCSGG
T ss_pred             ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChh
Confidence            99999999999999999975322                     2378999999999999999999999 9999999999


Q ss_pred             CeeeCCCCCeEEcccCCCcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          186 RIVFDDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       186 Nil~~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ||+++.++.+||+|||++.......      ...+++.|+|||.+.+..++.++||||||+++|+|++ |..||....
T Consensus       202 NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  279 (344)
T 1rjb_A          202 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP  279 (344)
T ss_dssp             GEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             hEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence            9999999999999999987553322      2345678999999998899999999999999999998 999987654

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=5e-40  Score=283.35  Aligned_cols=195  Identities=18%  Similarity=0.219  Sum_probs=167.5

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCC--CCCccccceeeEeCCcceEEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLR--NRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      ..|.+++.||+|+||.||++...+++.||+|++....  ....+.+.+|++++++++  |+||+++++++...+..++||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            3488999999999999999998779999999997543  233567899999999996  599999999999999999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---  209 (264)
                      | +.+++|.+++..  ...+++..+..++.||+.||.|||+. +|+||||||+||+++ ++.+||+|||+++.....   
T Consensus       136 E-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~-~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~  210 (390)
T 2zmd_A          136 E-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS  210 (390)
T ss_dssp             E-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHTT-TCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred             e-cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence            9 567899999974  34788889999999999999999999 999999999999995 589999999999865432   


Q ss_pred             ---CcccccccccccccccC-----------CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 ---RSYSTNLAFTPPEYLRT-----------GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ---~~~~~~~~y~aPE~~~~-----------~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                         ....+|+.|+|||++.+           ..++.++|||||||++|||++|+.||....
T Consensus       211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~  271 (390)
T 2zmd_A          211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII  271 (390)
T ss_dssp             ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh
Confidence               23468999999999865           358889999999999999999999997643

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=7.9e-40  Score=269.97  Aligned_cols=196  Identities=19%  Similarity=0.225  Sum_probs=171.6

Q ss_pred             cccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCCh------hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      .|++++.||+|+||.||++... +++.||+|.+......      ..+.+.+|+.++++++||||+++++++......++
T Consensus         6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   85 (283)
T 3bhy_A            6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL   85 (283)
T ss_dssp             HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEE
Confidence            4788899999999999999965 6889999998754321      25678999999999999999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC----CeEEcccCCCccc
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNS  206 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~----~~kl~dfg~~~~~  206 (264)
                      ||||+++++|.+++..  ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++    .++|+|||++...
T Consensus        86 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~  162 (283)
T 3bhy_A           86 ILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSK-RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI  162 (283)
T ss_dssp             EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred             EEeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence            9999999999999863  45689999999999999999999999 999999999999998776    8999999998765


Q ss_pred             CCC---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       207 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ...   ....+++.|+|||++.+..++.++||||||+++++|++|..||....
T Consensus       163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  215 (283)
T 3bhy_A          163 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET  215 (283)
T ss_dssp             C--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             cCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc
Confidence            433   23467899999999998889999999999999999999999997644

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=4.7e-40  Score=275.01  Aligned_cols=200  Identities=22%  Similarity=0.329  Sum_probs=174.0

Q ss_pred             CccccccccCCCCCCCeEEEEEe------CCCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcC-CCCCccccceeeEeCCc
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDE  127 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~  127 (264)
                      .+.|.+.+.||+|+||.||++.+      .+++.||+|.+..... ...+.+.+|+.+++++ +||||+++++++...+.
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~  101 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence            35688889999999999999984      3467999999986643 3356788999999999 89999999999999999


Q ss_pred             ceEEEecCCCCCHHHhhhcCCC----------------CCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC
Q 024659          128 RLLVAEYMPNDTLAKHLFHWET----------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD  191 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~~~----------------~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~  191 (264)
                      .++||||+++++|.+++.....                ..+++..++.++.|++.||.|||++ +++|+||||+||+++.
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~  180 (313)
T 1t46_A          102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNILLTH  180 (313)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEET
T ss_pred             cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCccceEEEcC
Confidence            9999999999999999975332                2589999999999999999999999 9999999999999999


Q ss_pred             CCCeEEcccCCCcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          192 DVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       192 ~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ++.+||+|||++.......      ...++..|+|||.+.+..++.++||||||+++++|++ |..||....
T Consensus       181 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~  252 (313)
T 1t46_A          181 GRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP  252 (313)
T ss_dssp             TTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred             CCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCccc
Confidence            9999999999988654432      2235678999999998899999999999999999999 898887544

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=4.8e-40  Score=281.24  Aligned_cols=195  Identities=20%  Similarity=0.301  Sum_probs=153.7

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeC------Cc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG------DE  127 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~  127 (264)
                      ..|++++.||+|+||.||+|.+ .+++.||+|++....  ....+.+.+|+++++.++||||+++++++...      ..
T Consensus        29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~  108 (367)
T 2fst_X           29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND  108 (367)
T ss_dssp             TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence            4588999999999999999994 568899999997643  23356788999999999999999999998654      55


Q ss_pred             ceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      .++++|++ +++|.+++.   ...+++..+..++.||+.||.|||+. |++||||||+||+++.++.+||+|||+++...
T Consensus       109 ~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~  183 (367)
T 2fst_X          109 VYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTA  183 (367)
T ss_dssp             CEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred             EEEEeccc-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence            79999998 678998884   35799999999999999999999999 99999999999999999999999999997654


Q ss_pred             CC-CcccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          208 DG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       208 ~~-~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .. ....+|..|+|||++.+ ..++.++|||||||+++||++|+.||....
T Consensus       184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  234 (367)
T 2fst_X          184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD  234 (367)
T ss_dssp             -------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             ccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            32 34578999999999987 568999999999999999999999997654

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=1.1e-39  Score=268.07  Aligned_cols=197  Identities=19%  Similarity=0.186  Sum_probs=173.2

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      +.|++++.||+|+||.||++... +++.||+|.+.... ....+.+.+|+.+++.++|+||+++++++.+.+..++|+||
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence            45788899999999999999964 68899999997543 23456788999999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC------
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD------  208 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~------  208 (264)
                      +++++|.+++.  ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++.....      
T Consensus        87 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~  163 (276)
T 2yex_A           87 CSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL  163 (276)
T ss_dssp             CTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred             cCCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence            99999999985  345789999999999999999999999 999999999999999999999999999875432      


Q ss_pred             CCcccccccccccccccCCCC-CCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 GRSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 ~~~~~~~~~y~aPE~~~~~~~-~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .....++..|+|||.+.+..+ +.++||||||+++++|++|+.||....
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  212 (276)
T 2yex_A          164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS  212 (276)
T ss_dssp             BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSC
T ss_pred             ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCc
Confidence            233467899999999987775 779999999999999999999997544

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=9.3e-40  Score=275.35  Aligned_cols=191  Identities=19%  Similarity=0.203  Sum_probs=168.5

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC-CCCccccceeeEe--CCcceEE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCE--GDERLLV  131 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~--~~~~~lv  131 (264)
                      -+.|++++.||+|+||.||++.. .+++.||+|.+....   .+.+.+|++++++++ |+||+++++++..  ....++|
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv  111 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV  111 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence            36688999999999999999984 678999999997543   466889999999997 9999999999987  5678999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC-CeEEcccCCCcccCCC-
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~-~~kl~dfg~~~~~~~~-  209 (264)
                      |||+.+++|.+++.     .++...+..++.|++.||.|||++ +++||||||+||+++.++ .+||+|||++...... 
T Consensus       112 ~e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~  185 (330)
T 3nsz_A          112 FEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ  185 (330)
T ss_dssp             EECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred             EeccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC
Confidence            99999999999885     388999999999999999999999 999999999999999766 8999999999765433 


Q ss_pred             --CcccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 --RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                        ....++..|+|||++.+ ..++.++||||||+++++|++|+.||...
T Consensus       186 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~  234 (330)
T 3nsz_A          186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG  234 (330)
T ss_dssp             CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred             ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence              33467889999999987 56899999999999999999999999644

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=2e-40  Score=279.40  Aligned_cols=198  Identities=20%  Similarity=0.281  Sum_probs=164.9

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCC----EEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQF----RIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      ..|++++.||+|+||.||+|.+. +++    .||+|.+.... ....+.+.+|+.++++++||||+++++++... ..++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~   93 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   93 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEE
Confidence            45788889999999999999953 343    35888886543 23456789999999999999999999999765 4788


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~  210 (264)
                      +++|+.+++|.+++.. ....+++..++.++.|++.||.|||++ +++||||||+||+++.++.+||+|||+++......
T Consensus        94 v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~  171 (327)
T 3poz_A           94 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  171 (327)
T ss_dssp             EEECCTTCBHHHHHHH-STTSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred             EEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence            9999999999999975 446799999999999999999999999 99999999999999999999999999987643322


Q ss_pred             ------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCcc
Q 024659          211 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHVS  257 (264)
Q Consensus       211 ------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~~  257 (264)
                            ...+|..|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus       172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~  225 (327)
T 3poz_A          172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA  225 (327)
T ss_dssp             C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG
T ss_pred             ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH
Confidence                  2244678999999999999999999999999999999 9999875443

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.7e-39  Score=271.97  Aligned_cols=196  Identities=16%  Similarity=0.231  Sum_probs=170.2

Q ss_pred             CccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      .+.|++++.||.|+||.||++.+. +++.||+|.+....  ..+.+.+|+.++++++||||+++++++...+..++|+||
T Consensus        28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  105 (314)
T 3com_A           28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY  105 (314)
T ss_dssp             --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence            455888999999999999999964 58899999997644  346788999999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----C
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R  210 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~  210 (264)
                      +++++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++......    .
T Consensus       106 ~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~  183 (314)
T 3com_A          106 CGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFM-RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN  183 (314)
T ss_dssp             CTTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBC
T ss_pred             CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccC
Confidence            999999999863 345789999999999999999999999 9999999999999999999999999998765432    3


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ...++..|+|||.+.+..++.++||||||+++|+|++|+.||...
T Consensus       184 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  228 (314)
T 3com_A          184 TVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI  228 (314)
T ss_dssp             CCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             ccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence            346789999999999888999999999999999999999999754

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=5.3e-40  Score=290.90  Aligned_cols=196  Identities=20%  Similarity=0.241  Sum_probs=171.2

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCC--CChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      ..|++++.||+|+||+||++.. .+++.||+|++...  .......+.+|++++++++||||+++++++.+....++|+|
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  101 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence            3488999999999999999995 46889999998642  12345678899999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeC---CCCCeEEcccCCCcccCCC-
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~---~~~~~kl~dfg~~~~~~~~-  209 (264)
                      |+.+++|.+.+..  ...+++..+..++.||+.||.|||++ |++||||||+||+++   .++.+||+|||++...... 
T Consensus       102 ~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~  178 (486)
T 3mwu_A          102 LYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKH-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT  178 (486)
T ss_dssp             CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-
T ss_pred             cCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC
Confidence            9999999998863  35689999999999999999999999 999999999999995   4567999999999765433 


Q ss_pred             --CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                        ....+|+.|+|||++.+ .++.++|||||||++|+|++|.+||....
T Consensus       179 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~  226 (486)
T 3mwu_A          179 KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN  226 (486)
T ss_dssp             ---CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence              33468999999999975 58999999999999999999999997654

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=6.7e-40  Score=274.00  Aligned_cols=202  Identities=16%  Similarity=0.186  Sum_probs=166.0

Q ss_pred             CCCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcce
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  129 (264)
                      ..+..|++++.||+|+||.||++.. .+++.||+|.+....   ......+.+|+.++++++|+||+++++++...+..+
T Consensus        29 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~  108 (310)
T 2wqm_A           29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELN  108 (310)
T ss_dssp             SSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred             ccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEE
Confidence            4456789999999999999999995 578899999998632   233456889999999999999999999999999999


Q ss_pred             EEEecCCCCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          130 LVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      +||||+.+++|.+++...  ....+++..++.++.|++.||.|||++ +++|+||+|+||+++.++.++|+|||++....
T Consensus       109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~  187 (310)
T 2wqm_A          109 IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFS  187 (310)
T ss_dssp             EEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred             EEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence            999999999999988632  345789999999999999999999999 99999999999999999999999999987544


Q ss_pred             CC----CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          208 DG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       208 ~~----~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ..    ....++..|+|||.+.+..++.++||||||+++|+|++|+.||....
T Consensus       188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~  240 (310)
T 2wqm_A          188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK  240 (310)
T ss_dssp             -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---
T ss_pred             CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence            32    23467889999999998889999999999999999999999997543

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=6.9e-40  Score=277.01  Aligned_cols=198  Identities=15%  Similarity=0.125  Sum_probs=174.9

Q ss_pred             CccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      ...|.+++.||+|+||.||++.+. +++.+|+|.+....   ....+.+.+|+.++++++|+||+++++++.+.+..++|
T Consensus        40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  119 (335)
T 2owb_A           40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV  119 (335)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence            456888899999999999999964 57899999987542   23356688999999999999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--  209 (264)
                      |||+.+++|.+++..  ...+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++......  
T Consensus       120 ~e~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~  196 (335)
T 2owb_A          120 LELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE  196 (335)
T ss_dssp             ECCCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred             EecCCCCCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence            999999999998863  35789999999999999999999999 9999999999999999999999999999765422  


Q ss_pred             --CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                        ....++..|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus       197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  245 (335)
T 2owb_A          197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC  245 (335)
T ss_dssp             CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC
Confidence              23467899999999998889999999999999999999999997643

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=5.3e-40  Score=290.75  Aligned_cols=196  Identities=18%  Similarity=0.190  Sum_probs=173.2

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      +.|++++.||+|+||.||++... +++.||+|++....   ....+.+.+|++++++++||||+++++++......++|+
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  105 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG  105 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            34888899999999999999964 68999999996543   234667899999999999999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeee---CCCCCeEEcccCCCcccCCC
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~---~~~~~~kl~dfg~~~~~~~~  209 (264)
                      ||+.+++|.+.+.  ....+++..+..++.||+.||.|||++ +++||||||+||++   +.++.+||+|||++......
T Consensus       106 e~~~~~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~  182 (484)
T 3nyv_A          106 EVYTGGELFDEII--SRKRFSEVDAARIIRQVLSGITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS  182 (484)
T ss_dssp             CCCCSCBHHHHHH--TCSCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCC
T ss_pred             ecCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccc
Confidence            9999999999886  445799999999999999999999999 99999999999999   46789999999998765543


Q ss_pred             C---cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 R---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ~---~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .   ...+|+.|+|||++.+ .++.++||||||+++|+|++|.+||....
T Consensus       183 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~  231 (484)
T 3nyv_A          183 KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN  231 (484)
T ss_dssp             CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC
Confidence            3   3468999999999875 68999999999999999999999997654

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=1e-39  Score=270.95  Aligned_cols=198  Identities=15%  Similarity=0.125  Sum_probs=174.4

Q ss_pred             CccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      ...|.+.+.||+|+||.||++.+. +++.+|+|.+....   ....+.+.+|+.++++++|+||+++++++.+.+..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            456888899999999999999964 57899999987542   23345688999999999999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--  209 (264)
                      +||+++++|.+++..  ...+++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++......  
T Consensus        94 ~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~  170 (294)
T 2rku_A           94 LELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE  170 (294)
T ss_dssp             EECCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred             EecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence            999999999998863  35689999999999999999999999 9999999999999999999999999998765422  


Q ss_pred             --CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                        ....++..|+|||.+.+..++.++||||||+++++|++|+.||....
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~  219 (294)
T 2rku_A          171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC  219 (294)
T ss_dssp             CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence              23467889999999998889999999999999999999999997643

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=8.8e-40  Score=285.10  Aligned_cols=196  Identities=18%  Similarity=0.195  Sum_probs=171.2

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcC------CCCCccccceeeEeCCcceE
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL------RNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~~~~~l  130 (264)
                      .|++++.||+|+||.||++.+ .+++.||+|++.... .....+.+|+++++.+      .|+||+++++++...+..++
T Consensus        98 ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  176 (429)
T 3kvw_A           98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICM  176 (429)
T ss_dssp             TEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEE
T ss_pred             cEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEE
Confidence            488899999999999999985 458899999997643 3345577788877776      56799999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCC--eEEcccCCCcccCC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN--PRLSCFGLMKNSRD  208 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~--~kl~dfg~~~~~~~  208 (264)
                      ||||+. ++|.+++.......+++..++.++.||+.||.|||+. +++||||||+||+++.++.  +||+|||++.....
T Consensus       177 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~  254 (429)
T 3kvw_A          177 TFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN-RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ  254 (429)
T ss_dssp             EECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH-TEECSCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred             EEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEEccCCCcceEEeecccceecCC
Confidence            999996 5899999765556799999999999999999999999 9999999999999998877  99999999976543


Q ss_pred             C-CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 G-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 ~-~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      . ....+|+.|+|||++.+..++.++|||||||++|||++|.+||....
T Consensus       255 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~  303 (429)
T 3kvw_A          255 RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED  303 (429)
T ss_dssp             CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence            3 34578999999999999899999999999999999999999997654

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=2.4e-40  Score=278.72  Aligned_cols=197  Identities=18%  Similarity=0.283  Sum_probs=166.6

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCE----EEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFR----IAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      +.|++++.||+|+||.||+|.+. ++..    ||+|.+.... ......+.+|+.++++++||||+++++++. ....++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence            45888999999999999999953 4443    7888886443 223345778999999999999999999886 566889


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-  209 (264)
                      |+||+.+++|.+++.. ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++..... 
T Consensus        92 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~  169 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQ-HRGALGPQLLLNWGVQIAKGMYYLEEH-GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD  169 (325)
T ss_dssp             EEECCTTCBSHHHHHS-SGGGSCTTHHHHHHHHHHHHHHHHHHT-TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred             EEEeCCCCCHHHHHHH-ccccCCHHHHHHHHHHHHHHHHHHHhC-CCCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence            9999999999999864 345788899999999999999999999 9999999999999999999999999999865432 


Q ss_pred             -----CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          210 -----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       210 -----~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                           ....++..|+|||++.+..++.++||||||+++|+|++ |..||....
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~  222 (325)
T 3kex_A          170 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR  222 (325)
T ss_dssp             TCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC
T ss_pred             ccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccC
Confidence                 22345678999999998899999999999999999999 999987544

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=5.9e-40  Score=285.43  Aligned_cols=196  Identities=16%  Similarity=0.170  Sum_probs=161.5

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC--------hhHHHHHHHHHHHhcCCCCCccccceeeEeCCc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--------PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE  127 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~  127 (264)
                      +.|.+++.||+|+||.||+|.+ .+++.||+|.+.....        .....+.+|++++++++||||+++++++. .+.
T Consensus       135 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~  213 (419)
T 3i6u_A          135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AED  213 (419)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSE
T ss_pred             ccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCc
Confidence            4578888999999999999995 5588999999875321        11224789999999999999999999975 556


Q ss_pred             ceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC---CCeEEcccCCCc
Q 024659          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMK  204 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~---~~~kl~dfg~~~  204 (264)
                      .++||||+++++|.+++.  ....+++..+..++.|++.||.|||++ +++||||||+||+++.+   ..+||+|||+++
T Consensus       214 ~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~  290 (419)
T 3i6u_A          214 YYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK  290 (419)
T ss_dssp             EEEEEECCTTCBGGGGTS--SSCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred             eEEEEEcCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEecCCCcceEEEeecccce
Confidence            899999999999999886  456799999999999999999999999 99999999999999754   459999999998


Q ss_pred             ccCCC---CcccccccccccccccC---CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          205 NSRDG---RSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       205 ~~~~~---~~~~~~~~y~aPE~~~~---~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .....   ....+|+.|+|||++.+   ..++.++||||||+++|+|++|+.||....
T Consensus       291 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~  348 (419)
T 3i6u_A          291 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR  348 (419)
T ss_dssp             SCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCS
T ss_pred             ecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCc
Confidence            75443   23467999999999864   558889999999999999999999997643

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=9.3e-40  Score=270.20  Aligned_cols=197  Identities=16%  Similarity=0.175  Sum_probs=168.7

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      .|.+.+.||+|+||.||++.. .++..+|+|.+.... ....+.+.+|++++++++||||+++++++.+....++||||+
T Consensus        23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~  102 (285)
T 3is5_A           23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETC  102 (285)
T ss_dssp             HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             heeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeC
Confidence            477888999999999999995 568899999987643 234577899999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeC---CCCCeEEcccCCCcccCCC-
Q 024659          136 PNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       136 ~~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~---~~~~~kl~dfg~~~~~~~~-  209 (264)
                      ++++|.+.+...  ....+++..+..++.|++.||.|||+. +++|+||||+||+++   .++.+||+|||++...... 
T Consensus       103 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~  181 (285)
T 3is5_A          103 EGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ-HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE  181 (285)
T ss_dssp             SCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred             CCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence            999999988532  246799999999999999999999999 999999999999994   5688999999999764432 


Q ss_pred             --CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                        ....++..|+|||++. ..++.++||||||+++++|++|+.||....
T Consensus       182 ~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~  229 (285)
T 3is5_A          182 HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS  229 (285)
T ss_dssp             -----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCC
Confidence              3446789999999986 568899999999999999999999997543

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=3e-40  Score=295.45  Aligned_cols=198  Identities=25%  Similarity=0.373  Sum_probs=173.7

Q ss_pred             CccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      .+.+++.++||+|+||.||++.+.++..||+|+++... ...+.+.+|++++++++|+||+++++++.. +..++||||+
T Consensus       266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~  343 (535)
T 2h8h_A          266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM  343 (535)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred             hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence            34577888999999999999999888889999998654 345679999999999999999999999865 6789999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-----C
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R  210 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-----~  210 (264)
                      .+++|.+++.......+++..++.++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++.....     .
T Consensus       344 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  422 (535)
T 2h8h_A          344 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ  422 (535)
T ss_dssp             TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTC
T ss_pred             cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceeccc
Confidence            999999999643345689999999999999999999999 9999999999999999999999999999865432     2


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ...++..|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus       423 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~  469 (535)
T 2h8h_A          423 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV  469 (535)
T ss_dssp             STTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC
T ss_pred             CCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence            2345678999999998899999999999999999999 888887543

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=1.3e-39  Score=275.19  Aligned_cols=200  Identities=21%  Similarity=0.325  Sum_probs=171.8

Q ss_pred             CccccccccCCCCCCCeEEEEEeC--------CCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcC-CCCCccccceeeEeC
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEG  125 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~  125 (264)
                      .+.|.+.+.||+|+||.||++.+.        ++..||+|.+..... ...+.+.+|+++++++ +||||+++++++...
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            356888899999999999999863        467899999986543 3356788999999999 899999999999999


Q ss_pred             CcceEEEecCCCCCHHHhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC
Q 024659          126 DERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD  191 (264)
Q Consensus       126 ~~~~lv~e~~~~~sL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~  191 (264)
                      +..++||||+++++|.+++....              ...+++..++.++.||+.||.|||++ +++|+||||+||+++.
T Consensus       114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~  192 (334)
T 2pvf_A          114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTE  192 (334)
T ss_dssp             SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECT
T ss_pred             CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCccceEEEcC
Confidence            99999999999999999997432              12488999999999999999999999 9999999999999999


Q ss_pred             CCCeEEcccCCCcccCCC------CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          192 DVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       192 ~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ++.+||+|||++......      ....+++.|+|||++.+..++.++||||||+++|+|++ |..||....
T Consensus       193 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~  264 (334)
T 2pvf_A          193 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP  264 (334)
T ss_dssp             TCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             CCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC
Confidence            999999999999765432      22345678999999988889999999999999999999 898887543

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=8.4e-40  Score=290.13  Aligned_cols=196  Identities=17%  Similarity=0.228  Sum_probs=167.6

Q ss_pred             cccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      .|++++.||+|+||+||++... ++..||+|++....  ......+.+|+.+++.++||||+++++++.+....++||||
T Consensus        38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~  117 (494)
T 3lij_A           38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMEC  117 (494)
T ss_dssp             HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence            4889999999999999999964 68899999997643  22356788999999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC---CCCeEEcccCCCcccCCC--
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRDG--  209 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~---~~~~kl~dfg~~~~~~~~--  209 (264)
                      +.+++|.+.+..  ...+++..+..++.||+.||.|||++ +++||||||+||+++.   ++.+||+|||++......  
T Consensus       118 ~~~g~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~  194 (494)
T 3lij_A          118 YKGGELFDEIIH--RMKFNEVDAAVIIKQVLSGVTYLHKH-NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK  194 (494)
T ss_dssp             CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC
T ss_pred             CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc
Confidence            999999998863  35689999999999999999999999 9999999999999975   455999999998765433  


Q ss_pred             -CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       210 -~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                       ....+|+.|+|||++. ..++.++|||||||++|+|++|.+||.....
T Consensus       195 ~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  242 (494)
T 3lij_A          195 MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD  242 (494)
T ss_dssp             BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH
Confidence             3346899999999986 5699999999999999999999999976543

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=1.2e-39  Score=289.84  Aligned_cols=197  Identities=16%  Similarity=0.197  Sum_probs=169.9

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC-------------hhHHHHHHHHHHHhcCCCCCccccceee
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-------------PDARQFLEEARAVGQLRNRRLANLLGCC  122 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~~i~~~~~~~  122 (264)
                      ..|.+++.||+|+||.||++.. .++..||+|++.....             ...+.+.+|+.++++++||||+++++++
T Consensus        36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~  115 (504)
T 3q5i_A           36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF  115 (504)
T ss_dssp             GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            5588999999999999999995 4588999999975431             2245688999999999999999999999


Q ss_pred             EeCCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC---CeEEcc
Q 024659          123 CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSC  199 (264)
Q Consensus       123 ~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~---~~kl~d  199 (264)
                      .+....++||||+++++|.+.+..  ...+++..+..++.||+.||.|||+. +++||||||+||+++.++   .+||+|
T Consensus       116 ~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~D  192 (504)
T 3q5i_A          116 EDKKYFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGICYLHKH-NIVHRDIKPENILLENKNSLLNIKIVD  192 (504)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred             EcCCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCcHHHEEEecCCCCccEEEEE
Confidence            999999999999999999998863  35699999999999999999999999 999999999999998765   699999


Q ss_pred             cCCCcccCCC---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          200 FGLMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       200 fg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                      ||++......   ....+|+.|+|||++. ..++.++||||||+++|+|++|.+||.....
T Consensus       193 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  252 (504)
T 3q5i_A          193 FGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND  252 (504)
T ss_dssp             CTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             CCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence            9999865443   3456899999999987 4689999999999999999999999986543

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=5.1e-40  Score=273.56  Aligned_cols=197  Identities=19%  Similarity=0.255  Sum_probs=168.6

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      ..|++++.||+|+||.||++.+. +++.||+|.+........+.+.+|++++++++||||+++++++...+..++|+||+
T Consensus        19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   98 (302)
T 2j7t_A           19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFC   98 (302)
T ss_dssp             GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECC
T ss_pred             cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeC
Confidence            45788999999999999999965 58899999998766566778999999999999999999999999989999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCccc----CCCCc
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS----RDGRS  211 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~----~~~~~  211 (264)
                      ++++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++...    .....
T Consensus        99 ~~~~l~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  176 (302)
T 2j7t_A           99 PGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSK-RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS  176 (302)
T ss_dssp             TTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC---
T ss_pred             CCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHHHEEECCCCCEEEEECCCCcccccccccccc
Confidence            99999998864 345699999999999999999999999 9999999999999999999999999986532    22334


Q ss_pred             cccccccccccccc-----CCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          212 YSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       212 ~~~~~~y~aPE~~~-----~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..++..|+|||++.     +..++.++||||||+++|+|++|+.||...
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  225 (302)
T 2j7t_A          177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL  225 (302)
T ss_dssp             --CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             ccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccC
Confidence            56889999999983     566899999999999999999999998754

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=5.3e-40  Score=280.24  Aligned_cols=199  Identities=18%  Similarity=0.223  Sum_probs=174.1

Q ss_pred             CccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      .+.|++++.||+|+||.||++.+. ++..||+|.+..... ...+.+.+|+.++++++||||+++++++...+..++|||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            356889999999999999999964 688999999986543 334668899999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC--CCCc
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--DGRS  211 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~--~~~~  211 (264)
                      |+++++|.+++..  ...+++..+..++.|++.||.|||++.+++|+||||+||+++.++.++|+|||++....  ....
T Consensus       112 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  189 (360)
T 3eqc_A          112 HMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS  189 (360)
T ss_dssp             CCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---
T ss_pred             CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccC
Confidence            9999999999964  34689999999999999999999984389999999999999999999999999986432  2334


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ..+++.|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus       190 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  234 (360)
T 3eqc_A          190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD  234 (360)
T ss_dssp             -CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCC
T ss_pred             CCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            578999999999999899999999999999999999999997544

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.7e-40  Score=282.96  Aligned_cols=197  Identities=18%  Similarity=0.215  Sum_probs=169.9

Q ss_pred             CccccccccCCCCCCCeEEEEEe----CCCCEEEEEEeCCCC----ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCC
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSA----WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGD  126 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~  126 (264)
                      ...|++++.||+|+||.||+++.    .+++.||+|+++...    ....+.+.+|+++++++ +|+||+++++++...+
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            45688999999999999999997    368899999997532    12234567899999999 6999999999999999


Q ss_pred             cceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCccc
Q 024659          127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (264)
Q Consensus       127 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~  206 (264)
                      ..++||||+++++|.+++..  ...+++..+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||+++..
T Consensus       133 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~  209 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKL-GIIYRDIKLENILLDSNGHVVLTDFGLSKEF  209 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred             eEEEEeecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence            99999999999999999963  34689999999999999999999999 9999999999999999999999999998754


Q ss_pred             CCC-----CcccccccccccccccCC--CCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          207 RDG-----RSYSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       207 ~~~-----~~~~~~~~y~aPE~~~~~--~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ...     ....+|+.|+|||++.+.  .++.++||||||+++|||++|+.||...
T Consensus       210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~  265 (355)
T 1vzo_A          210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD  265 (355)
T ss_dssp             CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCT
T ss_pred             ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccC
Confidence            321     234689999999999864  4788999999999999999999999643

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.2e-39  Score=267.45  Aligned_cols=194  Identities=23%  Similarity=0.333  Sum_probs=165.9

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCC---CEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcc-eEEE
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQ---FRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDER-LLVA  132 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~---~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~-~lv~  132 (264)
                      +.+.+.||+|+||.||+|.+ .++   ..+|+|.+..... ...+.+.+|+.++++++||||+++++++.+.+.. ++++
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~  102 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL  102 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence            44457789999999999984 333   3799999986543 3356788999999999999999999999876655 8999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----  208 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----  208 (264)
                      ||+.+++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++.....    
T Consensus       103 e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~  180 (298)
T 3pls_A          103 PYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQ-KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYY  180 (298)
T ss_dssp             CCCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGG
T ss_pred             ecccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCccc
Confidence            99999999999964 456789999999999999999999999 999999999999999999999999999975432    


Q ss_pred             ----CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          209 ----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       209 ----~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                          .....++..|+|||.+.+..++.++||||||+++|+|++|..||..
T Consensus       181 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~  230 (298)
T 3pls_A          181 SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYR  230 (298)
T ss_dssp             CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTT
T ss_pred             ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCc
Confidence                2234567899999999998999999999999999999997666543

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=2.8e-40  Score=278.38  Aligned_cols=198  Identities=22%  Similarity=0.284  Sum_probs=173.7

Q ss_pred             ccccccccCCCCCCCeEEEEEe-----CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEe--CCcce
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERL  129 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~  129 (264)
                      ..|++++.||+|+||.||++.+     .+++.||+|++........+.+.+|++++++++|+||+++++++..  ....+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            4588999999999999999984     3588999999998776666779999999999999999999999874  45688


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~  209 (264)
                      +||||+++++|.+++.. ....+++..++.++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++......
T Consensus       103 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~  180 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQR-HRARLDASRLLLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLD  180 (327)
T ss_dssp             EEEECCTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred             EEEeecCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence            99999999999999864 234689999999999999999999999 9999999999999999999999999999865432


Q ss_pred             C-------cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 R-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ~-------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .       ...++..|+|||++.+..++.++||||||+++++|++|..||....
T Consensus       181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~  234 (327)
T 3lxl_A          181 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPS  234 (327)
T ss_dssp             CSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH
T ss_pred             CccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCcccc
Confidence            2       2346777999999998889999999999999999999999886443

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=4.8e-40  Score=273.70  Aligned_cols=194  Identities=20%  Similarity=0.321  Sum_probs=167.5

Q ss_pred             cccccccCCCCCCCeEEEEEe-----CCCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeC--Ccce
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL  129 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~  129 (264)
                      .|++++.||+|+||.||++.+     .+++.||+|++.... ....+.+.+|++++++++|+||+++++++...  +..+
T Consensus        22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  101 (302)
T 4e5w_A           22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK  101 (302)
T ss_dssp             GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEE
T ss_pred             hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEE
Confidence            378888999999999999983     358899999998553 23356789999999999999999999999876  6689


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~  209 (264)
                      +||||+++++|.+++.. ....+++..++.++.|++.||.|||++ +++|+||||+||+++.++.++|+|||++......
T Consensus       102 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  179 (302)
T 4e5w_A          102 LIMEFLPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD  179 (302)
T ss_dssp             EEEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred             EEEEeCCCCcHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHhhcC-CcccCCCchheEEEcCCCCEEECcccccccccCC
Confidence            99999999999999954 345689999999999999999999999 9999999999999999999999999999765433


Q ss_pred             C-------cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCC
Q 024659          210 R-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       210 ~-------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                      .       ...++..|+|||++.+..++.++||||||+++|+|++|..|+.
T Consensus       180 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  230 (302)
T 4e5w_A          180 KEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDS  230 (302)
T ss_dssp             CCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred             CcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCc
Confidence            2       3456778999999998889999999999999999999988754

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=5e-41  Score=288.39  Aligned_cols=197  Identities=15%  Similarity=0.115  Sum_probs=160.1

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCC---CChhHHHHHHHH---HHHhcCCCCCccccc-------eee
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS---AWPDARQFLEEA---RAVGQLRNRRLANLL-------GCC  122 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~---~~l~~l~h~~i~~~~-------~~~  122 (264)
                      ..|.+.+.||+|+||.||+|.+ .+++.||+|++...   .....+.+.+|+   +.+++++||||++++       +++
T Consensus        73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~  152 (377)
T 3byv_A           73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  152 (377)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred             ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence            5577889999999999999995 66899999999743   333456788999   555666899999998       555


Q ss_pred             EeCC-----------------cceEEEecCCCCCHHHhhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCceee
Q 024659          123 CEGD-----------------ERLLVAEYMPNDTLAKHLFHWE-----TQPMKWAMRLRVALHIAEALEYCTSKERALYH  180 (264)
Q Consensus       123 ~~~~-----------------~~~lv~e~~~~~sL~~~l~~~~-----~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~  180 (264)
                      ...+                 ..+++|||+ +|+|.+++....     ...+++..++.++.||+.||.|||++ +++||
T Consensus       153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHr  230 (377)
T 3byv_A          153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY-GLVHT  230 (377)
T ss_dssp             ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT-TEECS
T ss_pred             hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC-CeecC
Confidence            4443                 278999999 579999996421     11233578889999999999999999 99999


Q ss_pred             ccCCCCeeeCCCCCeEEcccCCCcccCCC-CcccccccccccccccCC-----------CCCCccceechHHHHHHHHhC
Q 024659          181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTG-----------RVTPESVMYSFGTLLLDLLSG  248 (264)
Q Consensus       181 dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~-----------~~~~~~DiwslG~~l~el~~g  248 (264)
                      ||||+||+++.++.+||+|||+++..... ....+ +.|+|||++.+.           .++.++||||||+++|||++|
T Consensus       231 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg  309 (377)
T 3byv_A          231 YLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCA  309 (377)
T ss_dssp             CCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHS
T ss_pred             CCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHC
Confidence            99999999999999999999999864432 23355 899999999877           799999999999999999999


Q ss_pred             CCCCCCCc
Q 024659          249 KHIPPSHV  256 (264)
Q Consensus       249 ~~~~~~~~  256 (264)
                      +.||....
T Consensus       310 ~~Pf~~~~  317 (377)
T 3byv_A          310 DLPITKDA  317 (377)
T ss_dssp             SCCC----
T ss_pred             CCCCcccc
Confidence            99997543

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=7.6e-40  Score=269.98  Aligned_cols=191  Identities=18%  Similarity=0.280  Sum_probs=168.9

Q ss_pred             cccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEe------------
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE------------  124 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------------  124 (264)
                      .|++++.||+|+||.||++.+. +++.||+|.+....    +.+.+|++++++++||||+++++++..            
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~   87 (284)
T 2a19_B           12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNS   87 (284)
T ss_dssp             HEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--------
T ss_pred             ccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccc
Confidence            4778888999999999999965 78999999997654    346689999999999999999998854            


Q ss_pred             ----CCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEccc
Q 024659          125 ----GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF  200 (264)
Q Consensus       125 ----~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~df  200 (264)
                          ....++||||+++++|.+++.......+++..++.++.|++.||.|||++ +++|+||||+||+++.++.++|+||
T Consensus        88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Df  166 (284)
T 2a19_B           88 SRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK-KLINRDLKPSNIFLVDTKQVKIGDF  166 (284)
T ss_dssp             -CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCC
T ss_pred             cccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCHHHEEEcCCCCEEECcc
Confidence                34478999999999999999754456799999999999999999999999 9999999999999999999999999


Q ss_pred             CCCcccCCC---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCC
Q 024659          201 GLMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       201 g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                      |++......   ....+++.|+|||.+.+..++.++||||||+++|+|++|..|+.
T Consensus       167 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~  222 (284)
T 2a19_B          167 GLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF  222 (284)
T ss_dssp             TTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHH
T ss_pred             hhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcch
Confidence            998765443   33467899999999998889999999999999999999998764

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.8e-39  Score=268.65  Aligned_cols=197  Identities=21%  Similarity=0.310  Sum_probs=170.6

Q ss_pred             ccccccc-cCCCCCCCeEEEEEeC---CCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           57 AMENIVS-EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        57 ~~~~~l~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      ..+.+++ .||+|+||.||++.+.   ++..||+|.+..... ...+.+.+|++++++++||||+++++++ ..+..++|
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv   87 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV   87 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence            4466776 7999999999999853   577899999987543 3456789999999999999999999999 56678999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC-
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-  210 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-  210 (264)
                      |||+++++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++....... 
T Consensus        88 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~  165 (287)
T 1u59_A           88 MEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS  165 (287)
T ss_dssp             EECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred             EEeCCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHC-CEeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence            999999999999864 445699999999999999999999999 99999999999999999999999999997654322 


Q ss_pred             ------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          211 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       211 ------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                            ...++..|+|||++.+..++.++||||||+++|+|++ |+.||....
T Consensus       166 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~  218 (287)
T 1u59_A          166 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK  218 (287)
T ss_dssp             EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred             eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC
Confidence                  2244688999999988889999999999999999998 999987543

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=5.1e-40  Score=270.61  Aligned_cols=198  Identities=28%  Similarity=0.397  Sum_probs=165.2

Q ss_pred             CCccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeC-CcceEEEe
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG-DERLLVAE  133 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~lv~e  133 (264)
                      +.+.|++++.||+|+||.||++... ++.||+|.+....  ..+.+.+|++++++++||||+++++++... +..++|+|
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e   95 (278)
T 1byg_A           19 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE   95 (278)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred             ChhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence            3567889999999999999999875 6799999998654  456788999999999999999999997554 47899999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-Ccc
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY  212 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-~~~  212 (264)
                      |+++++|.+++.......+++..+..++.|++.||.|||++ +++|+||||+||+++.++.++|+|||++...... ...
T Consensus        96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~  174 (278)
T 1byg_A           96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG  174 (278)
T ss_dssp             CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred             cCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCcceEEEeCCCcEEEeeccccccccccccCC
Confidence            99999999999643333478899999999999999999999 9999999999999999999999999998754433 233


Q ss_pred             cccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       213 ~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      .++..|+|||.+.+..++.++||||||+++++|++ |..||....
T Consensus       175 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~  219 (278)
T 1byg_A          175 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP  219 (278)
T ss_dssp             -CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC
T ss_pred             CccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCC
Confidence            56788999999998899999999999999999998 999887543

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=2.3e-40  Score=285.43  Aligned_cols=198  Identities=15%  Similarity=0.166  Sum_probs=169.2

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC--------CCCccccceeeE----
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR--------NRRLANLLGCCC----  123 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~~i~~~~~~~~----  123 (264)
                      ..|++++.||+|+||.||++.+ .+++.||+|++.... ...+.+.+|++++++++        |+||+++++++.    
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~  115 (397)
T 1wak_A           37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV  115 (397)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred             CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence            5688999999999999999995 568899999997543 34567889999999985        778999999987    


Q ss_pred             eCCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC----------
Q 024659          124 EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----------  193 (264)
Q Consensus       124 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~----------  193 (264)
                      .....++||||+ +++|.+.+.......+++..++.++.||+.||.|||++.|++||||||+||+++.++          
T Consensus       116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~  194 (397)
T 1wak_A          116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEA  194 (397)
T ss_dssp             TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred             CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhh
Confidence            445789999999 556777665545567999999999999999999999854899999999999999775          


Q ss_pred             ---------------------------------------CeEEcccCCCcccCC-CCcccccccccccccccCCCCCCcc
Q 024659          194 ---------------------------------------NPRLSCFGLMKNSRD-GRSYSTNLAFTPPEYLRTGRVTPES  233 (264)
Q Consensus       194 ---------------------------------------~~kl~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~  233 (264)
                                                             .+||+|||++..... .....+|..|+|||++.+..++.++
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  274 (397)
T 1wak_A          195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPA  274 (397)
T ss_dssp             C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHH
T ss_pred             HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHH
Confidence                                                   799999999976543 3345789999999999998999999


Q ss_pred             ceechHHHHHHHHhCCCCCCCCc
Q 024659          234 VMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       234 DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      |||||||++|||++|+.||....
T Consensus       275 DiwslG~il~elltg~~pf~~~~  297 (397)
T 1wak_A          275 DIWSTACMAFELATGDYLFEPHS  297 (397)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCCC
T ss_pred             HHHHHHHHHHHHhhCCCCCCCCc
Confidence            99999999999999999997654

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=2.4e-39  Score=268.48  Aligned_cols=196  Identities=19%  Similarity=0.249  Sum_probs=168.5

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      .+.....||+|+||.||+|.+ .++..||+|.+........+.+.+|+.++++++||||+++++++...+..++|+||++
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  102 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP  102 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence            344445679999999999995 5688999999987765566779999999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC-CCCeEEcccCCCcccCC----CC
Q 024659          137 NDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSRD----GR  210 (264)
Q Consensus       137 ~~sL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~-~~~~kl~dfg~~~~~~~----~~  210 (264)
                      +++|.+++.... ...+++..+..++.|++.||.|||++ +++|+||+|+||+++. ++.++|+|||++.....    ..
T Consensus       103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~  181 (295)
T 2clq_A          103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE  181 (295)
T ss_dssp             EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----C
T ss_pred             CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC-CEEccCCChhhEEEECCCCCEEEeecccccccCCCCCccc
Confidence            999999997532 23567889999999999999999999 9999999999999987 89999999999876543    23


Q ss_pred             cccccccccccccccCCC--CCCccceechHHHHHHHHhCCCCCCC
Q 024659          211 SYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~--~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      ...++..|+|||++.+..  ++.++||||||+++|+|++|+.||..
T Consensus       182 ~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  227 (295)
T 2clq_A          182 TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE  227 (295)
T ss_dssp             CCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGG
T ss_pred             ccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccC
Confidence            446789999999997654  78899999999999999999999864

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=8.9e-40  Score=277.52  Aligned_cols=198  Identities=20%  Similarity=0.226  Sum_probs=165.6

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChh-----HHHHHHHHHHHhcCCCCCccccceeeEeCCcce
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD-----ARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  129 (264)
                      ...|++++.||+|+||.||++.+ .+++.||+|.+.......     .+.+.+|++++++++||||+++++++.+.+..+
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   88 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS   88 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred             hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence            45688888999999999999995 468999999997543221     235789999999999999999999999999999


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~  209 (264)
                      +|+||+++ +|.+++.. ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++......
T Consensus        89 lv~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~  165 (346)
T 1ua2_A           89 LVFDFMET-DLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQH-WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP  165 (346)
T ss_dssp             EEEECCSE-EHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred             EEEEcCCC-CHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHC-CEECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence            99999976 79888864 345688889999999999999999999 9999999999999999999999999998765432


Q ss_pred             ----CcccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 ----RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ----~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                          ....+|+.|+|||++.+. .++.++||||||+++|+|++|.+||....
T Consensus       166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~  217 (346)
T 1ua2_A          166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS  217 (346)
T ss_dssp             CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCC
Confidence                234678999999999765 48899999999999999999999987654

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=4.9e-40  Score=279.02  Aligned_cols=194  Identities=16%  Similarity=0.143  Sum_probs=161.9

Q ss_pred             ccccccccCCCCCCCeEEEEEeC----CCCEEEEEEeCCCCChh-----------HHHHHHHHHHHhcCCCCCcccccee
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWPD-----------ARQFLEEARAVGQLRNRRLANLLGC  121 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~~i~~~~~~  121 (264)
                      ..|.+++.||+|+||.||++.+.    .+..+|+|.+.......           ...+.+|+..++.++|+||++++++
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~  116 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS  116 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence            56889999999999999999964    57889999998654321           1235678889999999999999999


Q ss_pred             eEe----CCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC--Ce
Q 024659          122 CCE----GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV--NP  195 (264)
Q Consensus       122 ~~~----~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~--~~  195 (264)
                      +..    ....++||||+ +++|.+++..  ...+++..++.++.||+.||.|||+. +++||||||+||+++.++  .+
T Consensus       117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~~  192 (345)
T 2v62_A          117 GLTEFKGRSYRFMVMERL-GIDLQKISGQ--NGTFKKSTVLQLGIRMLDVLEYIHEN-EYVHGDIKAANLLLGYKNPDQV  192 (345)
T ss_dssp             EEEESSSCEEEEEEEECE-EEEHHHHCBG--GGBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEESSSTTSE
T ss_pred             cccccCCCcEEEEEEecc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCcCHHHEEEccCCCCcE
Confidence            988    67789999999 8999999864  33799999999999999999999999 999999999999998777  99


Q ss_pred             EEcccCCCcccCCC-----------CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          196 RLSCFGLMKNSRDG-----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       196 kl~dfg~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      ||+|||+++.....           ....++..|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus       193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~  262 (345)
T 2v62_A          193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQ  262 (345)
T ss_dssp             EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGG
T ss_pred             EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            99999999754321           234678999999999988899999999999999999999999964

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=1.9e-39  Score=278.04  Aligned_cols=194  Identities=15%  Similarity=0.213  Sum_probs=162.1

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCC------c
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD------E  127 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~  127 (264)
                      ..|++++.||+|+||.||++.+ .+++.||+|++....  ....+.+.+|+.+++.++||||+++++++....      .
T Consensus        25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~  104 (371)
T 2xrw_A           25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD  104 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred             hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence            5688899999999999999995 468899999997543  233456889999999999999999999987654      6


Q ss_pred             ceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      .++||||+.+ +|.+.+.    ..+++..+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||++....
T Consensus       105 ~~lv~e~~~~-~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~  178 (371)
T 2xrw_A          105 VYIVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  178 (371)
T ss_dssp             EEEEEECCSE-EHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred             eEEEEEcCCC-CHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHC-CeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence            7999999975 6888875    2488999999999999999999999 99999999999999999999999999997654


Q ss_pred             CC---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          208 DG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       208 ~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ..   ....+|+.|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus       179 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  230 (371)
T 2xrw_A          179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTD  230 (371)
T ss_dssp             -----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence            32   33467899999999999889999999999999999999999997654

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=3.8e-39  Score=267.86  Aligned_cols=195  Identities=26%  Similarity=0.386  Sum_probs=165.4

Q ss_pred             ccccccccCCCCCCCeEEEEEeCC----CCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEe-CCcceE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLL  130 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~l  130 (264)
                      ..|++.+.||+|+||.||+|.+.+    ...+|+|.+..... ...+.+.+|+.++++++||||+++++++.. .+..++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            457788899999999999998533    23689999986543 335678899999999999999999998654 557899


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-  209 (264)
                      ||||+++++|.+++.. ....+++..+..++.|++.||.|||++ +++||||||+||+++.++.+||+|||++...... 
T Consensus       105 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~  182 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE  182 (298)
T ss_dssp             EEECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGG
T ss_pred             EEeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCchheEEECCCCCEEECcccccccccccc
Confidence            9999999999999964 456789999999999999999999999 9999999999999999999999999998754332 


Q ss_pred             -------CcccccccccccccccCCCCCCccceechHHHHHHHHhCCC-CCC
Q 024659          210 -------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKH-IPP  253 (264)
Q Consensus       210 -------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~-~~~  253 (264)
                             ....+++.|+|||.+.+..++.++||||||+++++|++|.. ||.
T Consensus       183 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~  234 (298)
T 3f66_A          183 YYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP  234 (298)
T ss_dssp             GCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred             hhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCc
Confidence                   22345678999999998899999999999999999999554 444

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=8.6e-40  Score=277.50  Aligned_cols=200  Identities=19%  Similarity=0.224  Sum_probs=175.0

Q ss_pred             CccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChh-----------------HHHHHHHHHHHhcCCCCCcccc
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD-----------------ARQFLEEARAVGQLRNRRLANL  118 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~e~~~l~~l~h~~i~~~  118 (264)
                      ...|++++.||+|+||.||++.. +++.||+|.+.......                 .+.+.+|++++++++||||+++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            35688999999999999999999 88899999997432111                 1778999999999999999999


Q ss_pred             ceeeEeCCcceEEEecCCCCCHHHh------hhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceeeccCCCCeeeCC
Q 024659          119 LGCCCEGDERLLVAEYMPNDTLAKH------LFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDD  191 (264)
Q Consensus       119 ~~~~~~~~~~~lv~e~~~~~sL~~~------l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~-~~~i~H~dl~~~Nil~~~  191 (264)
                      ++++.+.+..++||||+++++|.++      +.......+++..+..++.|++.||.|||+ . |++|+||+|+||+++.
T Consensus       109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~i~H~dl~p~Nil~~~  187 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK-NICHRDVKPSNILMDK  187 (348)
T ss_dssp             SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS-CEECCCCCGGGEEECT
T ss_pred             EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC-CEeecCCChHhEEEcC
Confidence            9999999999999999999999998      654336789999999999999999999999 8 9999999999999999


Q ss_pred             CCCeEEcccCCCcccCCC--CcccccccccccccccCC-CCCC-ccceechHHHHHHHHhCCCCCCCCcc
Q 024659          192 DVNPRLSCFGLMKNSRDG--RSYSTNLAFTPPEYLRTG-RVTP-ESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       192 ~~~~kl~dfg~~~~~~~~--~~~~~~~~y~aPE~~~~~-~~~~-~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                      ++.++|+|||++......  ....++..|+|||.+.+. .++. ++||||||+++++|++|+.||.....
T Consensus       188 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~  257 (348)
T 2pml_X          188 NGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS  257 (348)
T ss_dssp             TSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSC
T ss_pred             CCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence            999999999999865432  345678999999999887 5666 99999999999999999999976543

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=1.6e-39  Score=273.94  Aligned_cols=197  Identities=17%  Similarity=0.164  Sum_probs=170.1

Q ss_pred             cccc-ccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCC-CCCccccceeeEeCCcceEEEe
Q 024659           59 ENIV-SEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA--WPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        59 ~~~l-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      |.++ +.||+|+||.||++... +++.||+|++....  ......+.+|+.+++++. ||||+++++++......++|||
T Consensus        30 y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e  109 (327)
T 3lm5_A           30 YILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILE  109 (327)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred             EeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEE
Confidence            5555 67899999999999954 68999999997543  223567889999999995 6999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC---CCCeEEcccCCCcccCCC-
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~---~~~~kl~dfg~~~~~~~~-  209 (264)
                      |+.+++|.+++.......+++..++.++.|++.||.|||+. |++||||||+||+++.   ++.+||+|||++...... 
T Consensus       110 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~-givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~  188 (327)
T 3lm5_A          110 YAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN-NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC  188 (327)
T ss_dssp             CCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC----
T ss_pred             ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc
Confidence            99999999998654557799999999999999999999999 9999999999999987   789999999999865443 


Q ss_pred             --CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                        ....+++.|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus       189 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  237 (327)
T 3lm5_A          189 ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED  237 (327)
T ss_dssp             -----CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence              33468999999999998899999999999999999999999997554

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.6e-39  Score=273.30  Aligned_cols=197  Identities=22%  Similarity=0.321  Sum_probs=166.3

Q ss_pred             ccccccccCCCCCCCeEEEEEeCC-----CCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLEN-----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      ..+.+.+.||+|+||.||+|.+..     +..||+|.+...... ....+.+|++++++++||||+++++++...+..++
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  123 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI  123 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence            456778889999999999998532     245999999865433 34568899999999999999999999998889999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~  210 (264)
                      ||||+++++|.+++.. ....+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++.......
T Consensus       124 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~  201 (333)
T 1mqb_A          124 ITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANM-NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP  201 (333)
T ss_dssp             EEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred             EEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChheEEECCCCcEEECCCCcchhhcccc
Confidence            9999999999999965 446789999999999999999999999 99999999999999999999999999987654321


Q ss_pred             -------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          211 -------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       211 -------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                             ...++..|+|||.+.+..++.++||||||+++|||++ |+.||...
T Consensus       202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~  254 (333)
T 1mqb_A          202 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWEL  254 (333)
T ss_dssp             ---------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             ccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccC
Confidence                   1234678999999998899999999999999999999 99998654

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=3.1e-39  Score=276.14  Aligned_cols=197  Identities=19%  Similarity=0.221  Sum_probs=171.6

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCCh----h----HHHHHHHHHHHhcC-CCCCccccceeeEeCC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP----D----ARQFLEEARAVGQL-RNRRLANLLGCCCEGD  126 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----~----~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~  126 (264)
                      ..|++.+.||.|+||.||++.+. +|+.||+|++......    .    .+.+.+|+.+++++ +||||+++++++....
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~  173 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS  173 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred             hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence            45788888999999999999964 6899999998764311    1    34577899999999 7999999999999999


Q ss_pred             cceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCccc
Q 024659          127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (264)
Q Consensus       127 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~  206 (264)
                      ..++||||+++++|.+++..  ...+++..+..++.||+.||.|||+. |++|+||||+||+++.++.++|+|||++...
T Consensus       174 ~~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~-gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~  250 (365)
T 2y7j_A          174 FMFLVFDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHAN-NIVHRDLKPENILLDDNMQIRLSDFGFSCHL  250 (365)
T ss_dssp             EEEEEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence            99999999999999999863  35689999999999999999999999 9999999999999999999999999998765


Q ss_pred             CCC---CcccccccccccccccC------CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          207 RDG---RSYSTNLAFTPPEYLRT------GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       207 ~~~---~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ...   ....+|+.|+|||++.+      ..++.++||||||+++|+|++|..||....
T Consensus       251 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~  309 (365)
T 2y7j_A          251 EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR  309 (365)
T ss_dssp             CTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             CCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC
Confidence            433   33568899999999863      358889999999999999999999997543

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=1.6e-39  Score=272.42  Aligned_cols=197  Identities=18%  Similarity=0.196  Sum_probs=169.1

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEe----CCcceE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLL  130 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~l  130 (264)
                      ...|++++.||+|+||.||++.. .+++.||+|++........+.+.+|++++++++||||+++++++..    ....++
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  107 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL  107 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence            35688999999999999999995 6789999999977665566778999999999999999999999873    346789


Q ss_pred             EEecCCCCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          131 VAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      |+||+.+++|.+++...  ....+++..++.++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus       108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~  186 (317)
T 2buj_A          108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK-GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACI  186 (317)
T ss_dssp             EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCSSCEESCE
T ss_pred             EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEcCCCCEEEEecCcchhccc
Confidence            99999999999988642  346789999999999999999999999 999999999999999999999999999875432


Q ss_pred             C-------------CcccccccccccccccCCC---CCCccceechHHHHHHHHhCCCCCC
Q 024659          209 G-------------RSYSTNLAFTPPEYLRTGR---VTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       209 ~-------------~~~~~~~~y~aPE~~~~~~---~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                      .             ....++..|+|||.+.+..   ++.++||||||+++|+|++|+.||.
T Consensus       187 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~  247 (317)
T 2buj_A          187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD  247 (317)
T ss_dssp             EEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTH
T ss_pred             ccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChh
Confidence            1             1124588999999987654   6889999999999999999999984

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.6e-39  Score=274.03  Aligned_cols=198  Identities=20%  Similarity=0.281  Sum_probs=164.9

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCC----EEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQF----RIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      ..|++++.||+|+||.||++.+. +++    .|++|.+.... ....+.+.+|+.++++++||||+++++++... ..++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~~   93 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   93 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-SEEE
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-CceE
Confidence            55888999999999999999953 443    35788876543 33456789999999999999999999999765 4788


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~  210 (264)
                      +++|+.+++|.+++.. ....+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus        94 v~~~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~  171 (327)
T 3lzb_A           94 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  171 (327)
T ss_dssp             EECCCSSCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred             EEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhC-CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence            9999999999999975 455799999999999999999999999 99999999999999999999999999997653321


Q ss_pred             ------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCcc
Q 024659          211 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHVS  257 (264)
Q Consensus       211 ------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~~  257 (264)
                            ...++..|+|||++.+..++.++||||||+++|||++ |..||.....
T Consensus       172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~  225 (327)
T 3lzb_A          172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA  225 (327)
T ss_dssp             --------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG
T ss_pred             ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH
Confidence                  2245678999999999999999999999999999999 9999876543

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.5e-39  Score=273.86  Aligned_cols=196  Identities=21%  Similarity=0.332  Sum_probs=172.0

Q ss_pred             ccccccccCCCCCCCeEEEEEe-----CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCC--cce
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD--ERL  129 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~  129 (264)
                      ..|++++.||+|+||.||++.+     .+++.||+|++........+.+.+|++++++++|+||+++++++...+  ..+
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  120 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK  120 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence            4578899999999999999984     358899999998877666778999999999999999999999986543  689


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~  209 (264)
                      +|+||+++++|.+++.. ....+++..++.++.|++.||.+||++ +++|+||||+||+++.++.+||+|||++......
T Consensus       121 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~  198 (326)
T 2w1i_A          121 LIMEYLPYGSLRDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD  198 (326)
T ss_dssp             EEECCCTTCBHHHHHHH-STTSSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEEETTEEEECCCTTCEECCSS
T ss_pred             EEEECCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhC-CEeccCCCcceEEEcCCCcEEEecCcchhhcccc
Confidence            99999999999999975 345689999999999999999999999 9999999999999999999999999999865433


Q ss_pred             C-------cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          210 R-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       210 ~-------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      .       ...++..|+|||.+.+..++.++||||||+++++|++|..|+..
T Consensus       199 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~  250 (326)
T 2w1i_A          199 KEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS  250 (326)
T ss_dssp             CSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGS
T ss_pred             ccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCC
Confidence            2       23456779999999988899999999999999999999988753

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=6e-39  Score=265.79  Aligned_cols=194  Identities=19%  Similarity=0.249  Sum_probs=167.6

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEe----CCcceE
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLL  130 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~l  130 (264)
                      .|.+.+.||+|+||.||+|.+ .++..||+|.+....  ....+.+.+|+.++++++||||+++++++..    ....++
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  106 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence            367777899999999999995 568899999987542  2345668899999999999999999999875    345899


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC--ceeeccCCCCeeeC-CCCCeEEcccCCCcccC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~--i~H~dl~~~Nil~~-~~~~~kl~dfg~~~~~~  207 (264)
                      ||||+++++|.+++..  ...+++..++.++.|++.||.|||+. +  ++|+||||+||+++ .++.+||+|||++....
T Consensus       107 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~  183 (290)
T 1t4h_A          107 VTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  183 (290)
T ss_dssp             EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             EEEecCCCCHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence            9999999999999963  35689999999999999999999999 8  99999999999998 78999999999987554


Q ss_pred             CC--CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          208 DG--RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       208 ~~--~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..  ....+++.|+|||++. +.++.++||||||+++++|++|+.||...
T Consensus       184 ~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~  232 (290)
T 1t4h_A          184 ASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSEC  232 (290)
T ss_dssp             TTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             ccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCc
Confidence            43  2346789999999887 45899999999999999999999999753

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2e-39  Score=277.92  Aligned_cols=195  Identities=26%  Similarity=0.403  Sum_probs=158.7

Q ss_pred             cccccccCCCCCCCeEEEEEeC--C--CCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEe-CCcceEE
Q 024659           58 MENIVSEHGEKAPNVVYKGKLE--N--QFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLLV  131 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~--~--~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv  131 (264)
                      .+++.+.||+|+||.||+|.+.  +  +..||+|.+.... ....+.+.+|+.++++++||||+++++++.. .+..++|
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            3567788999999999999853  2  2468999987543 3445678999999999999999999998754 4578999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--  209 (264)
                      |||+++++|.+++.. ....+++..+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||+++.....  
T Consensus       170 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~  247 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF  247 (373)
T ss_dssp             EECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred             EECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHC-CEecCccchheEEECCCCCEEEeecccccccccccc
Confidence            999999999999964 445688999999999999999999999 9999999999999999999999999999754322  


Q ss_pred             ------CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCC
Q 024659          210 ------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPS  254 (264)
Q Consensus       210 ------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~  254 (264)
                            ....++..|+|||++.+..++.++||||||+++|||++ |.+||..
T Consensus       248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~  299 (373)
T 3c1x_A          248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD  299 (373)
T ss_dssp             ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTT
T ss_pred             ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCC
Confidence                  22345678999999999999999999999999999999 5566654

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.3e-39  Score=272.46  Aligned_cols=198  Identities=15%  Similarity=0.240  Sum_probs=167.1

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcC-CCCCccccceeeEe------CCc
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCE------GDE  127 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~------~~~  127 (264)
                      ...|++++.||.|+||.||++.+ .+++.||+|.+.... ...+.+.+|+.+++++ +||||+++++++..      .+.
T Consensus        23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~  101 (326)
T 2x7f_A           23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ  101 (326)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence            45578888899999999999996 568899999997654 3346788999999999 79999999999977      457


Q ss_pred             ceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      .++||||+++++|.+++.......+++..+..++.||+.||.|||+. +++|+||||+||+++.++.+||+|||++....
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  180 (326)
T 2x7f_A          102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD  180 (326)
T ss_dssp             EEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTCCEEECCCTTTC---
T ss_pred             EEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCcHHHEEEcCCCCEEEeeCcCceecC
Confidence            89999999999999999764456789999999999999999999999 99999999999999999999999999987643


Q ss_pred             CC----Cccccccccccccccc-----CCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          208 DG----RSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       208 ~~----~~~~~~~~y~aPE~~~-----~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ..    ....++..|+|||++.     +..++.++||||||+++|+|++|..||...
T Consensus       181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  237 (326)
T 2x7f_A          181 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM  237 (326)
T ss_dssp             ----------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             cCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCC
Confidence            32    3346789999999987     456899999999999999999999999654

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=2.5e-39  Score=276.57  Aligned_cols=194  Identities=20%  Similarity=0.267  Sum_probs=168.0

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeC-----CcceE
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEG-----DERLL  130 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~l  130 (264)
                      .|++++.||+|+||.||++.+ .+++.||+|++...... ..+.+.+|++++++++||||+++++++...     ...++
T Consensus        28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i  107 (364)
T 3qyz_A           28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI  107 (364)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred             cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence            588889999999999999995 46889999999864433 346788999999999999999999998765     35799


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-  209 (264)
                      |+||+.+ +|.+++..   ..+++..+..++.|++.||.|||++ |++||||||+||+++.++.+||+|||++...... 
T Consensus       108 v~e~~~~-~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~  182 (364)
T 3qyz_A          108 VQDLMET-DLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH  182 (364)
T ss_dssp             EEECCSE-EHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred             EEcccCc-CHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence            9999975 89998853   4699999999999999999999999 9999999999999999999999999999765422 


Q ss_pred             ------CcccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 ------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ------~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                            ....+|+.|+|||++.+. .++.++||||||+++|+|++|+.||....
T Consensus       183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  236 (364)
T 3qyz_A          183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH  236 (364)
T ss_dssp             CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCC
Confidence                  234678999999987654 48999999999999999999999997654

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=1.6e-39  Score=273.79  Aligned_cols=200  Identities=24%  Similarity=0.331  Sum_probs=168.1

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCE--EEEEEeCCCC-ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFR--IAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l  130 (264)
                      ++.|++.+.||+|+||.||++.+ .++..  +++|.+.... ....+.+.+|+++++++ +||||+++++++.+.+..++
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l  103 (327)
T 1fvr_A           24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL  103 (327)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred             HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence            45678888999999999999995 45554  4899887532 23345688999999999 89999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeE
Q 024659          131 VAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPR  196 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~k  196 (264)
                      ||||+++++|.+++....              ...+++..++.++.||+.||.|||++ +++|+||||+||+++.++.+|
T Consensus       104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~~~~~~k  182 (327)
T 1fvr_A          104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVAK  182 (327)
T ss_dssp             EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECGGGCEE
T ss_pred             EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCccceEEEcCCCeEE
Confidence            999999999999996422              24789999999999999999999999 999999999999999999999


Q ss_pred             EcccCCCcccCC---CCcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          197 LSCFGLMKNSRD---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       197 l~dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      |+|||++.....   .....++..|+|||++.+..++.++||||||+++|+|++ |+.||....
T Consensus       183 L~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~  246 (327)
T 1fvr_A          183 IADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT  246 (327)
T ss_dssp             ECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred             EcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCc
Confidence            999999874322   223345788999999988889999999999999999998 999986543

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=2.2e-39  Score=272.08  Aligned_cols=193  Identities=24%  Similarity=0.323  Sum_probs=169.0

Q ss_pred             ccccccCCCCCCCeEEEEEeC-----CCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeC--CcceE
Q 024659           59 ENIVSEHGEKAPNVVYKGKLE-----NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLL  130 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--~~~~l  130 (264)
                      +++++.||+|+||.||++.+.     +++.||+|++..... ...+.+.+|++++++++||||+++++++.+.  ...++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            478899999999999988642     578999999987643 3356689999999999999999999999874  56899


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~  210 (264)
                      ||||+++++|.+++..   ..+++..++.++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++.......
T Consensus       113 v~e~~~~~~L~~~l~~---~~~~~~~~~~i~~~l~~~l~~LH~~-~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~  188 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH  188 (318)
T ss_dssp             EECCCTTCBHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCGGGCEECCTTC
T ss_pred             EEecccCCcHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCchheEEEcCCCCEEECCccccccccccc
Confidence            9999999999999953   3599999999999999999999999 99999999999999999999999999998654432


Q ss_pred             -------cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          211 -------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       211 -------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                             ...++..|+|||++.+..++.++||||||+++++|++|..||...
T Consensus       189 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~  240 (318)
T 3lxp_A          189 EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSP  240 (318)
T ss_dssp             SEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSH
T ss_pred             cccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCccccc
Confidence                   234677899999999888999999999999999999999988643

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=3.4e-39  Score=272.31  Aligned_cols=197  Identities=17%  Similarity=0.198  Sum_probs=172.3

Q ss_pred             ccccccccCCCCCCCeEEEEEe--CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCC------CccccceeeEeCCcc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL--ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNR------RLANLLGCCCEGDER  128 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~------~i~~~~~~~~~~~~~  128 (264)
                      +.|++++.||+|+||.||++.+  .+++.||+|++.... ...+.+.+|+++++.++|+      +++++++++...+..
T Consensus        14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~   92 (339)
T 1z57_A           14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI   92 (339)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred             CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence            4688999999999999999986  358899999997543 3356688899999888655      499999999999999


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC-----------------
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-----------------  191 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~-----------------  191 (264)
                      ++||||+ +++|.+++.......+++..+..++.|++.||.|||++ +++||||||+||+++.                 
T Consensus        93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~  170 (339)
T 1z57_A           93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN-KLTHTDLKPENILFVQSDYTEAYNPKIKRDERT  170 (339)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred             EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHHHEEEeccccccccCCcccccccc
Confidence            9999999 78999999765556789999999999999999999999 9999999999999987                 


Q ss_pred             --CCCeEEcccCCCcccCCC-CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          192 --DVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       192 --~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                        ++.+||+|||++...... ....+|..|+|||++.+..++.++||||||+++|||++|..||....
T Consensus       171 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  238 (339)
T 1z57_A          171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD  238 (339)
T ss_dssp             ESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC
T ss_pred             ccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence              668999999999865433 34578999999999998899999999999999999999999997654

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=9.3e-40  Score=271.90  Aligned_cols=200  Identities=18%  Similarity=0.245  Sum_probs=156.7

Q ss_pred             CCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      ..+.|++++.||+|+||.||++.. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   92 (303)
T 2vwi_A           13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM   92 (303)
T ss_dssp             CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred             chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence            346688899999999999999994 568899999997643 233456889999999999999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcC------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCccc
Q 024659          133 EYMPNDTLAKHLFHW------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (264)
Q Consensus       133 e~~~~~sL~~~l~~~------~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~  206 (264)
                      ||+++++|.+++...      ....+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++...
T Consensus        93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  171 (303)
T 2vwi_A           93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN-GQIHRDVKAGNILLGEDGSVQIADFGVSAFL  171 (303)
T ss_dssp             ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred             hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCCCCChhhEEEcCCCCEEEEeccchhee
Confidence            999999999998631      245689999999999999999999999 9999999999999999999999999998654


Q ss_pred             CCC---------CcccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          207 RDG---------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       207 ~~~---------~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ...         ....+++.|+|||.+.+ ..++.++||||||+++|+|++|+.||...
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  230 (303)
T 2vwi_A          172 ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKY  230 (303)
T ss_dssp             C---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred             ccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccC
Confidence            322         23467899999999876 46899999999999999999999999754

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=5.7e-39  Score=268.71  Aligned_cols=200  Identities=23%  Similarity=0.340  Sum_probs=161.6

Q ss_pred             ccccccccCCCCCCCeEEEEEeC----CCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCC----
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD----  126 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----  126 (264)
                      +.|.+.+.||+|+||.||++.+.    .+..||+|.+....  ....+.+.+|+.++++++||||+++++++....    
T Consensus        34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~  113 (313)
T 3brb_A           34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI  113 (313)
T ss_dssp             GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC------
T ss_pred             HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCC
Confidence            55778888999999999999843    34589999998653  233466889999999999999999999997654    


Q ss_pred             -cceEEEecCCCCCHHHhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccC
Q 024659          127 -ERLLVAEYMPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG  201 (264)
Q Consensus       127 -~~~lv~e~~~~~sL~~~l~~~----~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg  201 (264)
                       ..++|+||+++++|.+++...    ....+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||
T Consensus       114 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dikp~NIli~~~~~~kl~Dfg  192 (313)
T 3brb_A          114 PKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR-NFLHRDLAARNCMLRDDMTVCVADFG  192 (313)
T ss_dssp             -CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT-TCCCCCCSGGGEEECTTSCEEECSCS
T ss_pred             cccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcCCCcEEEeecC
Confidence             348999999999999998421    345789999999999999999999999 99999999999999999999999999


Q ss_pred             CCcccCCC------CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCcc
Q 024659          202 LMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHVS  257 (264)
Q Consensus       202 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~~  257 (264)
                      ++......      ....+++.|+|||.+.+..++.++||||||+++|+|++ |..||.....
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~  255 (313)
T 3brb_A          193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN  255 (313)
T ss_dssp             CC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred             cceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH
Confidence            98765332      22345778999999999899999999999999999999 7888865443

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=2.6e-39  Score=276.11  Aligned_cols=197  Identities=17%  Similarity=0.188  Sum_probs=162.6

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCCh-----------hHHHHHHHHHHHhcCCCCCccccceeeEeC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP-----------DARQFLEEARAVGQLRNRRLANLLGCCCEG  125 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~  125 (264)
                      +.|.+++.||+|+||.||++.+.++..||+|++......           ..+.+.+|++++++++||||+++++++...
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  101 (362)
T 3pg1_A           22 SPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHF  101 (362)
T ss_dssp             CSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEEC
T ss_pred             cceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEec
Confidence            456778888999999999999888999999999653221           136789999999999999999999998653


Q ss_pred             -----CcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEccc
Q 024659          126 -----DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF  200 (264)
Q Consensus       126 -----~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~df  200 (264)
                           ...++||||+. ++|.+.+.. ....+++..+..++.||+.||.|||+. +++|+||||+||+++.++.+||+||
T Consensus       102 ~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Df  178 (362)
T 3pg1_A          102 EEPAMHKLYLVTELMR-TDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEA-GVVHRDLHPGNILLADNNDITICDF  178 (362)
T ss_dssp             CTTTCCEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCT
T ss_pred             cCCCcceEEEEEccCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC-cCEecCCChHHEEEcCCCCEEEEec
Confidence                 35799999997 578888864 445789999999999999999999999 9999999999999999999999999


Q ss_pred             CCCcccCCC---CcccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          201 GLMKNSRDG---RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       201 g~~~~~~~~---~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      |++......   ....++..|+|||++.+ ..++.++||||||+++|+|++|+.||....
T Consensus       179 g~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~  238 (362)
T 3pg1_A          179 NLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST  238 (362)
T ss_dssp             TC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             CcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC
Confidence            999754332   33467889999999987 568999999999999999999999997643

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.7e-40  Score=284.75  Aligned_cols=197  Identities=15%  Similarity=0.192  Sum_probs=169.7

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCC--cceEEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGD--ERLLVA  132 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~  132 (264)
                      ..|.+.+.||+|+||.||+|.+. +++.||+|++..... ...+.+.+|++++++++||||+++++++...+  ..++||
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence            45888999999999999999965 588999999985432 23566789999999999999999999998755  679999


Q ss_pred             ecCCCCCHHHhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeee----CCCCCeEEcccCCCcccC
Q 024659          133 EYMPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF----DDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~----~~~~~~kl~dfg~~~~~~  207 (264)
                      ||+++++|.+++.... ...+++..++.++.||+.||.|||+. +++||||||+||++    +.++.+||+|||+++...
T Consensus        89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~  167 (396)
T 4eut_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE  167 (396)
T ss_dssp             CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred             ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC-CEEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence            9999999999996432 23489999999999999999999999 99999999999999    777889999999998654


Q ss_pred             CC---CcccccccccccccccC--------CCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          208 DG---RSYSTNLAFTPPEYLRT--------GRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       208 ~~---~~~~~~~~y~aPE~~~~--------~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      ..   ....+|..|+|||++.+        ..++.++||||||+++|||++|+.||..
T Consensus       168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~  225 (396)
T 4eut_A          168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP  225 (396)
T ss_dssp             CGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEEC
T ss_pred             CCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            43   23467899999999865        4578899999999999999999999963

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=1.8e-39  Score=267.33  Aligned_cols=201  Identities=17%  Similarity=0.221  Sum_probs=171.5

Q ss_pred             CCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEe--CCcce
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERL  129 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~  129 (264)
                      ..+.|++++.||+|+||.||++.. .+++.||+|.+....  ....+.+.+|++++++++||||+++++++..  ....+
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   83 (279)
T 2w5a_A            4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY   83 (279)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred             chhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence            356788999999999999999995 468899999997653  2334568899999999999999999998854  56789


Q ss_pred             EEEecCCCCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCC-----ceeeccCCCCeeeCCCCCeEEcccCC
Q 024659          130 LVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKER-----ALYHDLNAYRIVFDDDVNPRLSCFGL  202 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~~~-----i~H~dl~~~Nil~~~~~~~kl~dfg~  202 (264)
                      +||||+++++|.+++...  ....+++..++.++.|++.||.|||+. +     ++|+||||+||+++.++.+||+|||+
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~  162 (279)
T 2w5a_A           84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR-SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL  162 (279)
T ss_dssp             EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH-C------CCCCCSGGGEEECSSSCEEECCCCH
T ss_pred             EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc-cCCCCeeEEeccchhhEEEcCCCCEEEecCch
Confidence            999999999999998642  234589999999999999999999998 8     99999999999999999999999999


Q ss_pred             CcccCCCC----cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          203 MKNSRDGR----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       203 ~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      +.......    ...++..|+|||.+.+..++.++||||||+++|+|++|+.||....
T Consensus       163 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  220 (279)
T 2w5a_A          163 ARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS  220 (279)
T ss_dssp             HHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             heeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC
Confidence            87654432    2357889999999998889999999999999999999999987643

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=4.5e-40  Score=281.86  Aligned_cols=194  Identities=12%  Similarity=0.017  Sum_probs=151.6

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC---hhHHHHHHHH---HHHhcCCCCCccccc-------eeeE
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEA---RAVGQLRNRRLANLL-------GCCC  123 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~---~~l~~l~h~~i~~~~-------~~~~  123 (264)
                      .|.+++.||+|+||.||++.+ .+++.||+|++.....   ...+.+.+|+   ..|+. +||||++++       +++.
T Consensus        63 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~  141 (371)
T 3q60_A           63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVA  141 (371)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEE
T ss_pred             eeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhee
Confidence            377888999999999999995 4788999999987653   2234567774   45555 799987755       4443


Q ss_pred             eC-----------------CcceEEEecCCCCCHHHhhhcCCCCCCCHHHH------HHHHHHHHHHHHHHhcCCCceee
Q 024659          124 EG-----------------DERLLVAEYMPNDTLAKHLFHWETQPMKWAMR------LRVALHIAEALEYCTSKERALYH  180 (264)
Q Consensus       124 ~~-----------------~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~------~~i~~qi~~~l~~lh~~~~i~H~  180 (264)
                      ..                 ...++||||++ ++|.+++... +..+.+..+      ..++.||+.||.|||++ +++||
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~-~ivHr  218 (371)
T 3q60_A          142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL-DFVYVFRGDEGILALHILTAQLIRLAANLQSK-GLVHG  218 (371)
T ss_dssp             ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH-HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT-TEEET
T ss_pred             cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh-ccccchhhhhhhhhHHHHHHHHHHHHHHHHHC-CCccC
Confidence            32                 23799999998 7999999742 223444555      67889999999999999 99999


Q ss_pred             ccCCCCeeeCCCCCeEEcccCCCcccCCCC-cccccccccccccccC--CCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-SYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       181 dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~y~aPE~~~~--~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ||||+||+++.++.+||+|||+++...... ...+++.|+|||++.+  ..++.++||||||+++|||++|+.||...
T Consensus       219 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~  296 (371)
T 3q60_A          219 HFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLV  296 (371)
T ss_dssp             TCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBC
T ss_pred             cCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCc
Confidence            999999999999999999999998765544 4567799999999987  56999999999999999999999999765

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=1.4e-39  Score=273.37  Aligned_cols=198  Identities=22%  Similarity=0.364  Sum_probs=170.5

Q ss_pred             ccccccccCCCCCCCeEEEEEeC------CCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcce
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~  129 (264)
                      ..|++.+.||+|+||.||+|.+.      .++.||+|.+...... ....+.+|++++++++|+||+++++++.+.+..+
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~  104 (322)
T 1p4o_A           25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL  104 (322)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred             hheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccE
Confidence            45778888999999999999854      3678999999865432 3456889999999999999999999999888999


Q ss_pred             EEEecCCCCCHHHhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccC
Q 024659          130 LVAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG  201 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~--------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg  201 (264)
                      +||||+++++|.+++....        ...+++..++.++.|++.||.|||++ +++||||||+||+++.++.+||+|||
T Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~NIli~~~~~~kl~Dfg  183 (322)
T 1p4o_A          105 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFG  183 (322)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCSGGGEEECTTCCEEECCTT
T ss_pred             EEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CCccCCCccceEEEcCCCeEEECcCc
Confidence            9999999999999986421        24578999999999999999999999 99999999999999999999999999


Q ss_pred             CCcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          202 LMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       202 ~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      ++.......      ...+++.|+|||++.+..++.++||||||+++|+|++ |..||...
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~  244 (322)
T 1p4o_A          184 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL  244 (322)
T ss_dssp             CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS
T ss_pred             cccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC
Confidence            987543321      2244678999999998889999999999999999999 78887654

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=3.1e-39  Score=266.33  Aligned_cols=197  Identities=22%  Similarity=0.289  Sum_probs=168.0

Q ss_pred             CccccccccCCCCCCCeEEEEEeCC----CCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      .+.|.+.+.||+|+||.||++.+.+    +..||+|.+..... ...+.+.+|+.++++++||||+++++++.+ +..++
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~   89 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI   89 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence            3567888889999999999998532    34699999987633 345678999999999999999999999864 56789


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-  209 (264)
                      |+||+++++|.+++.. ....+++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++...... 
T Consensus        90 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  167 (281)
T 3cc6_A           90 IMELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESI-NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED  167 (281)
T ss_dssp             EEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEEEETTEEEECCCCGGGCC----
T ss_pred             EEecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCccceEEECCCCcEEeCccCCCccccccc
Confidence            9999999999999964 345689999999999999999999999 9999999999999999999999999998765432 


Q ss_pred             ----CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          210 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       210 ----~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                          ....++..|+|||++.+..++.++||||||+++|+|++ |+.||...
T Consensus       168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~  218 (281)
T 3cc6_A          168 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWL  218 (281)
T ss_dssp             -----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccC
Confidence                22345678999999998889999999999999999998 99998643

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.9e-39  Score=279.12  Aligned_cols=194  Identities=18%  Similarity=0.203  Sum_probs=163.9

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeC----------
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG----------  125 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----------  125 (264)
                      ..|++++.||+|+||.||++.+ .+++.||+|++.....    ...+|+++++.++|+||+++++++...          
T Consensus         7 ~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~   82 (383)
T 3eb0_A            7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP   82 (383)
T ss_dssp             TTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred             ceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence            4578888999999999999995 6789999999875432    233699999999999999999998543          


Q ss_pred             ----------------------------CcceEEEecCCCCCHHHhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Q 024659          126 ----------------------------DERLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKE  175 (264)
Q Consensus       126 ----------------------------~~~~lv~e~~~~~sL~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lh~~~  175 (264)
                                                  ...++||||+++ +|.+.+..  .....+++..+..++.||+.||.|||+. 
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-  160 (383)
T 3eb0_A           83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL-  160 (383)
T ss_dssp             ---------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-
T ss_pred             ccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence                                        237899999975 78777753  1456799999999999999999999999 


Q ss_pred             CceeeccCCCCeeeC-CCCCeEEcccCCCcccCCC---CcccccccccccccccCCC-CCCccceechHHHHHHHHhCCC
Q 024659          176 RALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKH  250 (264)
Q Consensus       176 ~i~H~dl~~~Nil~~-~~~~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~  250 (264)
                      |++||||||+||+++ .++.+||+|||+++.....   ....++..|+|||.+.+.. ++.++|||||||++|||++|++
T Consensus       161 gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~  240 (383)
T 3eb0_A          161 GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP  240 (383)
T ss_dssp             TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCC
Confidence            999999999999998 6899999999999865332   3456789999999988755 8999999999999999999999


Q ss_pred             CCCCCc
Q 024659          251 IPPSHV  256 (264)
Q Consensus       251 ~~~~~~  256 (264)
                      ||....
T Consensus       241 pf~~~~  246 (383)
T 3eb0_A          241 LFSGET  246 (383)
T ss_dssp             SSCCSS
T ss_pred             CCCCCC
Confidence            998654

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=3.8e-39  Score=270.07  Aligned_cols=195  Identities=18%  Similarity=0.243  Sum_probs=163.1

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeE------------
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCC------------  123 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------------  123 (264)
                      +.|++++.||+|+||.||++.+. +++.||+|++........+.+.+|++++++++||||+++++++.            
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   90 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS   90 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred             CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence            55889999999999999999965 48899999998776566678899999999999999999999873            


Q ss_pred             --eCCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeC-CCCCeEEccc
Q 024659          124 --EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCF  200 (264)
Q Consensus       124 --~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~-~~~~~kl~df  200 (264)
                        .....++|+||+. ++|.+++.   ...+++..++.++.|++.||.|||++ +++|+||||+||+++ +++.+||+||
T Consensus        91 ~~~~~~~~lv~e~~~-~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~kl~Df  165 (320)
T 2i6l_A           91 LTELNSVYIVQEYME-TDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSA-NVLHRDLKPANLFINTEDLVLKIGDF  165 (320)
T ss_dssp             CCSCSEEEEEEECCS-EEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred             ccccCceeEEeeccC-CCHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCeEEEccC
Confidence              3356799999997 58999984   45689999999999999999999999 999999999999997 5679999999


Q ss_pred             CCCcccCCC-------CcccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          201 GLMKNSRDG-------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       201 g~~~~~~~~-------~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      |++......       ....++..|+|||.+.+ ..++.++||||||+++|||++|+.||....
T Consensus       166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  229 (320)
T 2i6l_A          166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH  229 (320)
T ss_dssp             TTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC
Confidence            999865321       23345788999998875 568999999999999999999999997654

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=2.7e-39  Score=267.86  Aligned_cols=194  Identities=21%  Similarity=0.353  Sum_probs=159.0

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      ..|++.+.||+|+||.||++.+.+  .+|+|.+.....  ...+.+.+|++++++++|+||+++++++ .....++|+||
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~  100 (289)
T 3og7_A           24 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQW  100 (289)
T ss_dssp             TSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEEC
T ss_pred             cceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEe
Confidence            447788899999999999998654  599999976532  3346789999999999999999999965 55678999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC------
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD------  208 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~------  208 (264)
                      +.+++|.+++.. ....+++..++.++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.....      
T Consensus       101 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~-~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  178 (289)
T 3og7_A          101 CEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAK-SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ  178 (289)
T ss_dssp             CCEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEETTTEEEECCCC-------------
T ss_pred             cCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhC-CcccccCccceEEECCCCCEEEccceecccccccccccc
Confidence            999999999854 456789999999999999999999999 999999999999999999999999999875432      


Q ss_pred             CCccccccccccccccc---CCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          209 GRSYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       209 ~~~~~~~~~y~aPE~~~---~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      .....++..|+|||.+.   +..++.++||||||+++++|++|+.||...
T Consensus       179 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~  228 (289)
T 3og7_A          179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI  228 (289)
T ss_dssp             -----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             ccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCcccc
Confidence            12346789999999986   556888999999999999999999999753

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=3e-39  Score=293.01  Aligned_cols=190  Identities=22%  Similarity=0.318  Sum_probs=164.0

Q ss_pred             cCCCCCCCeEEEEEeC---CCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCCC
Q 024659           64 EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT  139 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~s  139 (264)
                      +||+|+||.||+|.+.   ++..||+|+++... ....+.+.+|++++++++||||+++++++.. +..++||||+++++
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence            6899999999999853   45679999998653 3356789999999999999999999999865 56899999999999


Q ss_pred             HHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc-------c
Q 024659          140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-------Y  212 (264)
Q Consensus       140 L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~-------~  212 (264)
                      |.+++.. ....+++..+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||+++.......       .
T Consensus       422 L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~-~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~  499 (613)
T 2ozo_A          422 LHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEK-NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG  499 (613)
T ss_dssp             HHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC------------
T ss_pred             HHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCC
Confidence            9999864 455799999999999999999999999 999999999999999999999999999986543221       2


Q ss_pred             cccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       213 ~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      .+++.|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus       500 ~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~  544 (613)
T 2ozo_A          500 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK  544 (613)
T ss_dssp             --CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred             CCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC
Confidence            33578999999998899999999999999999998 999997543

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=5.4e-39  Score=266.86  Aligned_cols=200  Identities=18%  Similarity=0.160  Sum_probs=173.1

Q ss_pred             CCCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC---------hhHHHHHHHHHHHhcCC-CCCccccceee
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---------PDARQFLEEARAVGQLR-NRRLANLLGCC  122 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---------~~~~~~~~e~~~l~~l~-h~~i~~~~~~~  122 (264)
                      ..+..|++++.||.|+||.||++.. .+++.||+|.+.....         ...+.+.+|+++++++. ||||+++++++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   93 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY   93 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence            3456788999999999999999996 4688999999976431         11345788999999996 99999999999


Q ss_pred             EeCCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCC
Q 024659          123 CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL  202 (264)
Q Consensus       123 ~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~  202 (264)
                      ......++||||+++++|.+++..  ...+++..+..++.|++.||.|||++ +++|+||+|+||+++.++.++|+|||+
T Consensus        94 ~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~  170 (298)
T 1phk_A           94 ETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKL-NIVHRDLKPENILLDDDMNIKLTDFGF  170 (298)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             ccCCeEEEEEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEEcCCCcEEEecccc
Confidence            999999999999999999999963  35689999999999999999999999 999999999999999999999999999


Q ss_pred             CcccCCC---Cccccccccccccccc------CCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          203 MKNSRDG---RSYSTNLAFTPPEYLR------TGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       203 ~~~~~~~---~~~~~~~~y~aPE~~~------~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      +......   ....++..|+|||++.      ...++.++||||||+++++|++|..||....
T Consensus       171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~  233 (298)
T 1phk_A          171 SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK  233 (298)
T ss_dssp             CEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             hhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc
Confidence            8765433   2346789999999985      4458899999999999999999999986543

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=6.9e-39  Score=277.60  Aligned_cols=195  Identities=15%  Similarity=0.215  Sum_probs=154.0

Q ss_pred             ccccc-cCCCCCCCeEEEEEeC---CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEe--CCcceEEE
Q 024659           59 ENIVS-EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLLVA  132 (264)
Q Consensus        59 ~~~l~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~  132 (264)
                      |++.+ +||+|+||.||++...   +++.||+|.+.....  ...+.+|+.++++++||||+++++++..  ....++||
T Consensus        22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~   99 (405)
T 3rgf_A           22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF   99 (405)
T ss_dssp             EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred             hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence            55545 6899999999999954   478999999986542  3467899999999999999999999965  56789999


Q ss_pred             ecCCCCCHHHhhhcC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeee----CCCCCeEEcccC
Q 024659          133 EYMPNDTLAKHLFHW-------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF----DDDVNPRLSCFG  201 (264)
Q Consensus       133 e~~~~~sL~~~l~~~-------~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~----~~~~~~kl~dfg  201 (264)
                      ||+.+ +|.+++...       ....+++..++.++.||+.||.|||++ +|+||||||+||++    +.++.+||+|||
T Consensus       100 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg  177 (405)
T 3rgf_A          100 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIADMG  177 (405)
T ss_dssp             ECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECCSSTTTTCEEECCTT
T ss_pred             eCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-CEeCCCcCHHHeEEecCCCCCCcEEEEECC
Confidence            99965 788877521       123589999999999999999999999 99999999999999    677899999999


Q ss_pred             CCcccCCC-------CcccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          202 LMKNSRDG-------RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       202 ~~~~~~~~-------~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                      +++.....       ....+|+.|+|||++.+.. ++.++|||||||++|||++|++||.....
T Consensus       178 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~  241 (405)
T 3rgf_A          178 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE  241 (405)
T ss_dssp             CCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC-
T ss_pred             CceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccc
Confidence            99865432       2346789999999998754 89999999999999999999999976544

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=2.7e-39  Score=271.81  Aligned_cols=196  Identities=16%  Similarity=0.155  Sum_probs=165.3

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC--------hhHHHHHHHHHHHhcCCCCCccccceeeEeCCc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--------PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE  127 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~  127 (264)
                      +.|.+++.||+|+||.||++.+ .+++.||+|.+.....        .....+.+|++++++++||||+++++++... .
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~   88 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE-D   88 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS-S
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC-c
Confidence            3578889999999999999995 4588999999975421        1123478999999999999999999998654 4


Q ss_pred             ceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC---CeEEcccCCCc
Q 024659          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSCFGLMK  204 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~---~~kl~dfg~~~  204 (264)
                      .++||||+++++|.+++.  ....+++..+..++.||+.||.|||++ +++|+||||+||+++.++   .+||+|||++.
T Consensus        89 ~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~  165 (322)
T 2ycf_A           89 YYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK  165 (322)
T ss_dssp             EEEEEECCTTEETHHHHS--TTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred             eEEEEecCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence            899999999999999886  456789999999999999999999999 999999999999998665   49999999998


Q ss_pred             ccCCCC---ccccccccccccccc---CCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          205 NSRDGR---SYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       205 ~~~~~~---~~~~~~~y~aPE~~~---~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ......   ...++..|+|||++.   ...++.++||||||+++|+|++|..||....
T Consensus       166 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  223 (322)
T 2ycf_A          166 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR  223 (322)
T ss_dssp             ECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTT
T ss_pred             ecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence            665432   235789999999974   4568999999999999999999999997543

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=2.9e-39  Score=265.69  Aligned_cols=198  Identities=20%  Similarity=0.298  Sum_probs=167.0

Q ss_pred             CccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      ...|.+.+.||+|+||.||++.+. +++.||+|.+....   ....+.+.+|+++++.++||||+++++++...+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            356888899999999999999965 68899999997532   12245688999999999999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--  209 (264)
                      +||+++++|.+++..  ...+++..+..++.|++.||.|||++ +++|+||+|+||+++.++.++|+|||++......  
T Consensus        90 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~  166 (276)
T 2h6d_A           90 MEYVSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRH-MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF  166 (276)
T ss_dssp             EECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHH-CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred             EeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCChhhEEECCCCCEEEeecccccccCCCcc
Confidence            999999999999863  34689999999999999999999999 9999999999999999999999999998765443  


Q ss_pred             -CcccccccccccccccCCCC-CCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 -RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 -~~~~~~~~y~aPE~~~~~~~-~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                       ....+++.|+|||.+.+..+ +.++||||||+++++|++|+.||....
T Consensus       167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~  215 (276)
T 2h6d_A          167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH  215 (276)
T ss_dssp             ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc
Confidence             23467889999999987765 689999999999999999999997543

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=2.3e-39  Score=273.24  Aligned_cols=197  Identities=15%  Similarity=0.194  Sum_probs=155.4

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC-CCCccccceeeEe--------CCc
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCE--------GDE  127 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~--------~~~  127 (264)
                      .|++++.||+|+||.||++.+ .+++.||+|++........+.+.+|+.+++++. ||||+++++++..        ...
T Consensus        29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~  108 (337)
T 3ll6_A           29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAE  108 (337)
T ss_dssp             EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEE
T ss_pred             eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCce
Confidence            578889999999999999995 468899999997766556677899999999996 9999999999853        234


Q ss_pred             ceEEEecCCCCCHHHhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCC--ceeeccCCCCeeeCCCCCeEEcccCCCc
Q 024659          128 RLLVAEYMPNDTLAKHLFHW-ETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lh~~~~--i~H~dl~~~Nil~~~~~~~kl~dfg~~~  204 (264)
                      .++++||+. ++|.+++... ....+++..++.++.||+.||.|||+. +  ++|+||||+||+++.++.+||+|||++.
T Consensus       109 ~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~  186 (337)
T 3ll6_A          109 FLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSAT  186 (337)
T ss_dssp             EEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCCCCCGGGCEECTTSCEEBCCCTTCB
T ss_pred             EEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCEEEccCCcccEEECCCCCEEEecCccce
Confidence            789999996 6899888642 345699999999999999999999999 8  9999999999999999999999999998


Q ss_pred             ccCCCC----------------cccccccccccccc---cCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          205 NSRDGR----------------SYSTNLAFTPPEYL---RTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       205 ~~~~~~----------------~~~~~~~y~aPE~~---~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ......                ...+++.|+|||++   .+..++.++||||||+++|+|++|+.||....
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~  257 (337)
T 3ll6_A          187 TISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGA  257 (337)
T ss_dssp             CCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----
T ss_pred             eccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchh
Confidence            654322                23478899999998   45668999999999999999999999986543

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=2.2e-39  Score=281.89  Aligned_cols=193  Identities=21%  Similarity=0.232  Sum_probs=162.1

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCC------cceE
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD------ERLL  130 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~~~l  130 (264)
                      .|++++.||+|+||.||++.+ .+++.||+|++.....    ...+|++++++++|+||+++++++....      ..++
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l  130 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL  130 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred             eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence            478888999999999999996 4589999999875431    2346999999999999999999985421      2678


Q ss_pred             EEecCCCCCHHHhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC-CCeEEcccCCCcccC
Q 024659          131 VAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSR  207 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~-~~~kl~dfg~~~~~~  207 (264)
                      ||||+++ +|.+.+..  .....+++..++.++.||+.||.|||++ +|+||||||+||+++.+ +.+||+|||+++...
T Consensus       131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~  208 (420)
T 1j1b_A          131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV  208 (420)
T ss_dssp             EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence            9999976 57766542  1456799999999999999999999999 99999999999999965 678999999998643


Q ss_pred             C---CCcccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          208 D---GRSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       208 ~---~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .   .....+|+.|+|||++.+. .++.++|||||||++|||++|++||....
T Consensus       209 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~  261 (420)
T 1j1b_A          209 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS  261 (420)
T ss_dssp             TTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence            3   2345778999999999765 68999999999999999999999998654

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=8e-40  Score=278.41  Aligned_cols=192  Identities=16%  Similarity=0.157  Sum_probs=166.2

Q ss_pred             ccccccccCCCCCCCeEEEEEeCC---------CCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccc----------
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLEN---------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLAN----------  117 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~----------  117 (264)
                      ..|.+++.||+|+||.||++.+..         ++.||+|.+...     +.+.+|++++++++||||++          
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  116 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL  116 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence            468888999999999999999653         789999999754     35778999999999999887          


Q ss_pred             -----cceeeEe-CCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC
Q 024659          118 -----LLGCCCE-GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD  191 (264)
Q Consensus       118 -----~~~~~~~-~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~  191 (264)
                           +++++.. ....++||||+ +++|.+++.......+++..++.++.||+.||.|||++ +++||||||+||+++.
T Consensus       117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dikp~NIl~~~  194 (352)
T 2jii_A          117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN-EYVHGNVTAENIFVDP  194 (352)
T ss_dssp             CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCCGGGEEEET
T ss_pred             cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCHHHEEEcC
Confidence                 5666665 66789999999 89999999754346799999999999999999999999 9999999999999999


Q ss_pred             CC--CeEEcccCCCcccCCC-----------CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          192 DV--NPRLSCFGLMKNSRDG-----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       192 ~~--~~kl~dfg~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ++  .+||+|||++......           ....+++.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus       195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  271 (352)
T 2jii_A          195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC  271 (352)
T ss_dssp             TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred             CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence            88  9999999999754321           2236789999999999889999999999999999999999999754

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=1.7e-39  Score=274.16  Aligned_cols=201  Identities=20%  Similarity=0.314  Sum_probs=172.2

Q ss_pred             CCccccccccCCCCCCCeEEEEEeCC------CCEEEEEEeCCCCCh-hHHHHHHHHHHHhcC-CCCCccccceeeEeCC
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGD  126 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~  126 (264)
                      ..+.|.+.+.||+|+||.||++....      ...||+|.+...... ..+.+.+|+.+++++ +||||+++++++...+
T Consensus        44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  123 (333)
T 2i1m_A           44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG  123 (333)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence            34668888899999999999999643      247999999865433 345688999999999 8999999999999999


Q ss_pred             cceEEEecCCCCCHHHhhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCC
Q 024659          127 ERLLVAEYMPNDTLAKHLFHWE------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN  194 (264)
Q Consensus       127 ~~~lv~e~~~~~sL~~~l~~~~------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~  194 (264)
                      ..++||||+++++|.+++....            ...+++..++.++.|++.||.|||++ +++|+||||+||+++.++.
T Consensus       124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~~~~~~  202 (333)
T 2i1m_A          124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK-NCIHRDVAARNVLLTNGHV  202 (333)
T ss_dssp             SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGCEEEGGGE
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC-CcccCCcccceEEECCCCe
Confidence            9999999999999999986421            34678999999999999999999999 9999999999999999999


Q ss_pred             eEEcccCCCcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          195 PRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       195 ~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      +||+|||++.......      ...++..|+|||.+.+..++.++||||||+++|||++ |..||....
T Consensus       203 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  271 (333)
T 2i1m_A          203 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL  271 (333)
T ss_dssp             EEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             EEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccc
Confidence            9999999987543322      2345678999999998899999999999999999998 888887543

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=5.8e-39  Score=270.38  Aligned_cols=200  Identities=22%  Similarity=0.330  Sum_probs=168.3

Q ss_pred             CccccccccCCCCCCCeEEEEEe------CCCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcc
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  128 (264)
                      ...|++++.||+|+||.||++.+      .++..||+|.+..... .....+.+|+.++++++||||+++++++......
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  108 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  108 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence            35678899999999999999984      2467899999975532 3345688999999999999999999999998899


Q ss_pred             eEEEecCCCCCHHHhhhcCCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC---CCCeEEccc
Q 024659          129 LLVAEYMPNDTLAKHLFHWET-----QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCF  200 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~-----~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~---~~~~kl~df  200 (264)
                      ++||||+++++|.+++.....     ..+++..++.++.|++.||.|||+. +++|+||||+||+++.   +..++|+||
T Consensus       109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~i~H~dlkp~NIli~~~~~~~~~kl~Df  187 (327)
T 2yfx_A          109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDF  187 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred             EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC-CeecCcCCHhHEEEecCCCcceEEECcc
Confidence            999999999999999975322     3588999999999999999999999 9999999999999984   456999999


Q ss_pred             CCCcccCC------CCcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          201 GLMKNSRD------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       201 g~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      |++.....      .....+++.|+|||.+.+..++.++||||||+++|+|++ |..||....
T Consensus       188 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~  250 (327)
T 2yfx_A          188 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS  250 (327)
T ss_dssp             HHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             ccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC
Confidence            99864322      223456789999999998889999999999999999998 888887543

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=4.1e-39  Score=269.61  Aligned_cols=202  Identities=20%  Similarity=0.285  Sum_probs=171.9

Q ss_pred             CCCccccccccCCCCCCCeEEEEEe------CCCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcC-CCCCccccceeeEeC
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEG  125 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~  125 (264)
                      -..+.|++.+.||+|+||.||++.+      .+++.||+|.+...... ..+.+.+|+.++.++ +||||+++++++...
T Consensus        24 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  103 (316)
T 2xir_A           24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP  103 (316)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred             cchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecC
Confidence            3456788999999999999999984      34689999999875433 345688999999999 689999999998775


Q ss_pred             C-cceEEEecCCCCCHHHhhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeC
Q 024659          126 D-ERLLVAEYMPNDTLAKHLFHWET--------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD  190 (264)
Q Consensus       126 ~-~~~lv~e~~~~~sL~~~l~~~~~--------------~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~  190 (264)
                      + ..++|+||+++++|.+++.....              ..+++..+..++.|++.||.|||+. +++|+||||+||+++
T Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dikp~Nil~~  182 (316)
T 2xir_A          104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLS  182 (316)
T ss_dssp             TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEC
T ss_pred             CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC-CcccccCccceEEEC
Confidence            4 48999999999999999974322              1278999999999999999999999 999999999999999


Q ss_pred             CCCCeEEcccCCCcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          191 DDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       191 ~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      .++.+||+|||++.......      ...+++.|+|||++.+..++.++||||||+++|+|++ |..||....
T Consensus       183 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~  255 (316)
T 2xir_A          183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK  255 (316)
T ss_dssp             GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccc
Confidence            99999999999987654332      2345678999999998899999999999999999998 998886543

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=8.9e-39  Score=265.23  Aligned_cols=194  Identities=16%  Similarity=0.149  Sum_probs=167.3

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceee-EeCCcceEEEec
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCC-CEGDERLLVAEY  134 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~~lv~e~  134 (264)
                      +.|++++.||+|+||.||++.+ .+++.||+|++.....  .+.+.+|+.+++.++|++++..+..+ ......++||||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~   86 (296)
T 3uzp_A            9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   86 (296)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence            4578888999999999999995 6789999999876542  24588999999999988877666665 456678999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeC---CCCCeEEcccCCCcccCCC--
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDG--  209 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~---~~~~~kl~dfg~~~~~~~~--  209 (264)
                      + +++|.+++.. ....+++..+..++.|++.||.|||++ +++|+||||+||+++   .++.+||+|||++......  
T Consensus        87 ~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~  163 (296)
T 3uzp_A           87 L-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART  163 (296)
T ss_dssp             C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred             c-CCCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence            9 8899999964 345799999999999999999999999 999999999999994   7899999999998764432  


Q ss_pred             ---------CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 ---------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 ---------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                               ....++..|+|||.+.+..++.++||||||+++|+|++|+.||...
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  218 (296)
T 3uzp_A          164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL  218 (296)
T ss_dssp             CCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             ccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCc
Confidence                     3346789999999999989999999999999999999999999753

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=7.9e-39  Score=265.42  Aligned_cols=194  Identities=16%  Similarity=0.150  Sum_probs=164.7

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceee-EeCCcceEEEec
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCC-CEGDERLLVAEY  134 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~~lv~e~  134 (264)
                      +.|++++.||+|+||.||++.+ .+++.||+|.+.....  ...+.+|+++++.++|++++..+..+ ...+..+++|||
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~   86 (296)
T 4hgt_A            9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   86 (296)
T ss_dssp             --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence            4578888899999999999995 6788999998765432  23477899999999988877776666 556778999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeee---CCCCCeEEcccCCCcccCCC--
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDG--  209 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~---~~~~~~kl~dfg~~~~~~~~--  209 (264)
                      + +++|.+++.. ....+++..+..++.|++.||.|||++ +++||||||+||++   +.++.+||+|||++......  
T Consensus        87 ~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~  163 (296)
T 4hgt_A           87 L-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART  163 (296)
T ss_dssp             C-CCBHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred             c-CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence            9 8899999864 345799999999999999999999999 99999999999999   78899999999999765432  


Q ss_pred             ---------CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 ---------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 ---------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                               ....++..|+|||.+.+..++.++||||||+++|+|++|+.||...
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  218 (296)
T 4hgt_A          164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL  218 (296)
T ss_dssp             CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCccc
Confidence                     2346789999999999989999999999999999999999999754

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=4.5e-39  Score=266.71  Aligned_cols=196  Identities=22%  Similarity=0.301  Sum_probs=167.4

Q ss_pred             ccccccc-cCCCCCCCeEEEEEe---CCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           57 AMENIVS-EHGEKAPNVVYKGKL---ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        57 ~~~~~l~-~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      ..|.+.+ .||+|+||.||++.+   ..++.||+|.+.....  ...+.+.+|++++++++||||+++++++ ..+..++
T Consensus        16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l   94 (291)
T 1xbb_A           16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML   94 (291)
T ss_dssp             GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred             hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence            4577777 899999999999963   3468899999986532  2356789999999999999999999999 5677899


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~  210 (264)
                      |+||+++++|.+++..  ...+++..++.++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus        95 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  171 (291)
T 1xbb_A           95 VMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE  171 (291)
T ss_dssp             EEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred             EEEeCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhC-CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCC
Confidence            9999999999999974  45689999999999999999999999 99999999999999999999999999987654332


Q ss_pred             c-------ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          211 S-------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       211 ~-------~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      .       ..++..|+|||.+.+..++.++||||||+++|+|++ |+.||....
T Consensus       172 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~  225 (291)
T 1xbb_A          172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK  225 (291)
T ss_dssp             SEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred             CcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC
Confidence            2       234578999999988889999999999999999999 999987543

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=1.5e-38  Score=265.03  Aligned_cols=199  Identities=17%  Similarity=0.161  Sum_probs=168.7

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC----ChhHHHHHHHHHHHhcCCCCCccccceeeE--eCCcc
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCC--EGDER  128 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--~~~~~  128 (264)
                      ...|++++.||+|+||.||++.+ .+++.+|+|.+....    ......+.+|++++++++|+||+++++++.  +....
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM   83 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred             ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence            35688899999999999999995 568899999997532    233467899999999999999999999984  44578


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      ++||||+.++ |.+++.......+++..+..++.|++.||.|||++ +++|+||||+||+++.++.++|+|||++.....
T Consensus        84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~  161 (305)
T 2wtk_C           84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ-GIVHKDIKPGNLLLTTGGTLKISALGVAEALHP  161 (305)
T ss_dssp             EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence            9999999876 88877665567899999999999999999999999 999999999999999999999999999876532


Q ss_pred             C------CcccccccccccccccCCC--CCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 G------RSYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 ~------~~~~~~~~y~aPE~~~~~~--~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .      ....++..|+|||++.+..  ++.++||||||+++|+|++|+.||....
T Consensus       162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  217 (305)
T 2wtk_C          162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN  217 (305)
T ss_dssp             TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch
Confidence            1      2345789999999998654  4779999999999999999999997643

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=7e-39  Score=269.44  Aligned_cols=198  Identities=19%  Similarity=0.220  Sum_probs=167.6

Q ss_pred             ccccccccCCCCCCCeEEEEEe--CCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcC---CCCCccccceeeE-----e
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL--ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQL---RNRRLANLLGCCC-----E  124 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~~i~~~~~~~~-----~  124 (264)
                      ..|++++.||+|+||.||++.+  .+++.||+|++.....  .....+.+|+.+++.+   +||||+++++++.     .
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~   90 (326)
T 1blx_A           11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   90 (326)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred             hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCC
Confidence            4588899999999999999997  4688999999864321  1123455677666655   8999999999987     4


Q ss_pred             CCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCc
Q 024659          125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (264)
Q Consensus       125 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~  204 (264)
                      ....++|+||+. ++|.+++.......+++..+..++.|++.||.|||++ |++|+||||+||+++.++.+||+|||++.
T Consensus        91 ~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-gi~H~dlkp~Nili~~~~~~kl~Dfg~~~  168 (326)
T 1blx_A           91 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLAR  168 (326)
T ss_dssp             EEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred             CceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCHHHeEEcCCCCEEEecCcccc
Confidence            456899999997 5899999765556799999999999999999999999 99999999999999999999999999987


Q ss_pred             ccCCC---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          205 NSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       205 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .....   ....++..|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus       169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  223 (326)
T 1blx_A          169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS  223 (326)
T ss_dssp             CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC
Confidence            65432   23467899999999998889999999999999999999999997543

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=1.5e-38  Score=273.47  Aligned_cols=198  Identities=17%  Similarity=0.140  Sum_probs=169.9

Q ss_pred             CccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC-CC-----CccccceeeEeCCcc
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NR-----RLANLLGCCCEGDER  128 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----~i~~~~~~~~~~~~~  128 (264)
                      .+.|++++.||+|+||.||+|.+. +++.||+|++.... .....+..|+.+++.++ |+     +|+++++++...+..
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  131 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL  131 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred             eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence            356888899999999999999954 68899999997543 33456777888888875 44     489999999999999


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc--CCCceeeccCCCCeeeC--CCCCeEEcccCCCc
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS--KERALYHDLNAYRIVFD--DDVNPRLSCFGLMK  204 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~--~~~i~H~dl~~~Nil~~--~~~~~kl~dfg~~~  204 (264)
                      ++||||+.+ +|.+++.......+++..+..++.|++.||.|||.  . +|+||||||+||+++  .++.+||+|||++.
T Consensus       132 ~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~-~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~  209 (382)
T 2vx3_A          132 CLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPEL-SIIHCDLKPENILLCNPKRSAIKIVDFGSSC  209 (382)
T ss_dssp             EEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTT-CEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred             EEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCC-CEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence            999999965 89999976555679999999999999999999994  5 899999999999995  47889999999998


Q ss_pred             ccCCC-CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          205 NSRDG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       205 ~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ..... ....+|+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       210 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~  262 (382)
T 2vx3_A          210 QLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN  262 (382)
T ss_dssp             ETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            65433 44578999999999999899999999999999999999999998654

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=1.9e-38  Score=271.86  Aligned_cols=194  Identities=16%  Similarity=0.232  Sum_probs=165.1

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh--hHHHHHHHHHHHhcCCCCCccccceeeEeCCcc-----
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDER-----  128 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~-----  128 (264)
                      ..|.+++.||+|+||.||++.+ .+++.||+|++......  ....+.+|+.+++.++||||+++++++...+..     
T Consensus        42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~  121 (371)
T 4exu_A           42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  121 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred             ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence            4577888899999999999995 56889999999865322  246688999999999999999999999876654     


Q ss_pred             -eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          129 -LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       129 -~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                       ++||||+. ++|.+.+.    ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++....
T Consensus       122 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~  195 (371)
T 4exu_A          122 FYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSA-GVVHRDLKPGNLAVNEDCELKILDFGLARHAD  195 (371)
T ss_dssp             CEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred             EEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence             99999997 57888763    3489999999999999999999999 99999999999999999999999999998654


Q ss_pred             CC-CcccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          208 DG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       208 ~~-~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .. ....+|+.|+|||++.+ ..++.++||||||+++++|++|+.||....
T Consensus       196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  246 (371)
T 4exu_A          196 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD  246 (371)
T ss_dssp             ----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC
Confidence            33 34567899999999987 568999999999999999999999997653

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=4.2e-39  Score=277.94  Aligned_cols=194  Identities=19%  Similarity=0.222  Sum_probs=162.5

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCc------ceE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE------RLL  130 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~------~~l  130 (264)
                      ..|.+++.||+|+||.||++.+..+..+|+|++.....    ...+|+++++.++||||+++++++.....      .++
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l  115 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL  115 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence            45888999999999999999987766788888865431    12369999999999999999999966443      789


Q ss_pred             EEecCCCCCHHHhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeC-CCCCeEEcccCCCcccC
Q 024659          131 VAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~-~~~~~kl~dfg~~~~~~  207 (264)
                      ||||++++ +.+.+..  .....+++..++.++.||+.||.|||++ +++||||||+||+++ .++.+||+|||+++...
T Consensus       116 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~  193 (394)
T 4e7w_A          116 VLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI-GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI  193 (394)
T ss_dssp             EEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             EeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence            99999775 5444321  1356799999999999999999999999 999999999999999 78999999999997643


Q ss_pred             C---CCcccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          208 D---GRSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       208 ~---~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .   .....+|+.|+|||++.+. .++.++|||||||++|||++|++||....
T Consensus       194 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~  246 (394)
T 4e7w_A          194 AGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES  246 (394)
T ss_dssp             TTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             CCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            3   2345678999999999765 48999999999999999999999998654

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=1.1e-38  Score=271.09  Aligned_cols=195  Identities=16%  Similarity=0.227  Sum_probs=167.5

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeC-----Ccce
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEG-----DERL  129 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~  129 (264)
                      +.|.+++.||+|+||.||++.+. +++.||+|.+...... ....+.+|++++++++||||+++++++...     ...+
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   90 (353)
T 2b9h_A           11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY   90 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred             cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence            45788889999999999999964 6889999999764433 345678999999999999999999988654     5689


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~  209 (264)
                      +++||+. ++|.+++..   ..+++..+..++.|++.||.|||++ |++||||||+||+++.++.+||+|||++......
T Consensus        91 lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~  165 (353)
T 2b9h_A           91 IIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGS-NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES  165 (353)
T ss_dssp             EEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred             EEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEEcCCCcEEEEecccccccccc
Confidence            9999997 589998853   4689999999999999999999999 9999999999999999999999999998765321


Q ss_pred             --------------CcccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 --------------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 --------------~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                                    ....+|..|+|||++.+ ..++.++||||||+++|+|++|++||....
T Consensus       166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  227 (353)
T 2b9h_A          166 AADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD  227 (353)
T ss_dssp             --------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                          12356889999998765 668999999999999999999999997654

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=1.6e-38  Score=262.92  Aligned_cols=198  Identities=18%  Similarity=0.174  Sum_probs=157.3

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChh-H-HHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD-A-RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~-~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      .+.|++++.||+|+||.||++.. .+++.||+|++....... . +.+.++...++.++||||+++++++.+.+..++||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            45688999999999999999995 578899999998653222 2 23445555688889999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-
Q 024659          133 EYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       133 e~~~~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-  209 (264)
                      ||+++ +|.+++...  ....+++..++.++.|++.||.|||++.+++|+||||+||+++.++.+||+|||++...... 
T Consensus        86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  164 (290)
T 3fme_A           86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV  164 (290)
T ss_dssp             ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC----------
T ss_pred             ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccccc
Confidence            99975 788777532  45679999999999999999999998448999999999999999999999999998765433 


Q ss_pred             --Ccccccccccccccc----cCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          210 --RSYSTNLAFTPPEYL----RTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~----~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                        ....+++.|+|||++    .+..++.++||||||+++++|++|+.||..
T Consensus       165 ~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  215 (290)
T 3fme_A          165 AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS  215 (290)
T ss_dssp             -----CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred             cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccc
Confidence              223678999999996    455689999999999999999999999975

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=2.4e-38  Score=279.11  Aligned_cols=195  Identities=18%  Similarity=0.183  Sum_probs=167.5

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCC-CCccccceeeEeCCcceEEEec
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN-RRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      +.|++++.||.|+||.||++.+ .+++.||+|++......  ..+.+|+++++.++| +++..+..++......++||||
T Consensus         7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~   84 (483)
T 3sv0_A            7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL   84 (483)
T ss_dssp             TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence            4578899999999999999995 66899999998755422  347789999999987 5555666666677788999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeee---CCCCCeEEcccCCCcccCCCC-
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDGR-  210 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~---~~~~~~kl~dfg~~~~~~~~~-  210 (264)
                      + +++|.+++.. ....+++..++.++.||+.||.|||++ +|+||||||+|||+   +.++.+||+|||+++...... 
T Consensus        85 ~-g~sL~~ll~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~-gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~  161 (483)
T 3sv0_A           85 L-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST  161 (483)
T ss_dssp             C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred             C-CCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence            9 8899999964 356799999999999999999999999 99999999999999   578999999999998654322 


Q ss_pred             ----------cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 ----------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 ----------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                                ...+|..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~  217 (483)
T 3sv0_A          162 HQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLK  217 (483)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred             ccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccc
Confidence                      4568899999999999999999999999999999999999997643

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=2.2e-38  Score=269.11  Aligned_cols=197  Identities=15%  Similarity=0.168  Sum_probs=169.6

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CC-CEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCC------ccccceeeEeCCcc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQ-FRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR------LANLLGCCCEGDER  128 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~------i~~~~~~~~~~~~~  128 (264)
                      ..|++++.||+|+||.||++.+. ++ ..||+|+++... ...+.+.+|+.++++++|++      ++.+++++...+..
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~   97 (355)
T 2eu9_A           19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM   97 (355)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred             ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence            45888999999999999999964 34 689999997543 33556788999999987655      88999999999999


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeee-------------------
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF-------------------  189 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~-------------------  189 (264)
                      ++||||+ +++|.+.+.......+++..++.++.||+.||.|||++ +++||||||+||++                   
T Consensus        98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~-~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~  175 (355)
T 2eu9_A           98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSEFETLYNEHKSCEEKS  175 (355)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred             EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEecccccccccccccccccc
Confidence            9999999 55677777654556799999999999999999999999 99999999999999                   


Q ss_pred             CCCCCeEEcccCCCcccCCC-CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          190 DDDVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       190 ~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      +.++.+||+|||++...... ....+|+.|+|||++.+..++.++||||||+++|||++|..||....
T Consensus       176 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  243 (355)
T 2eu9_A          176 VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE  243 (355)
T ss_dssp             ESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Confidence            56789999999999865433 44578999999999998899999999999999999999999997654

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.4e-38  Score=267.21  Aligned_cols=185  Identities=19%  Similarity=0.266  Sum_probs=156.9

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcC--CCCCccccceeeEeC----CcceE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL--RNRRLANLLGCCCEG----DERLL  130 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~~i~~~~~~~~~~----~~~~l  130 (264)
                      +.|++++.||+|+||.||++.+. ++.||+|++....   ......|.+++..+  +|+||+++++++...    ...++
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l  112 (337)
T 3mdy_A           37 KQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYL  112 (337)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEE
T ss_pred             cceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEE
Confidence            45889999999999999999976 7799999986432   33445556665554  899999999999887    67899


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-------CceeeccCCCCeeeCCCCCeEEcccCCC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE-------RALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~-------~i~H~dl~~~Nil~~~~~~~kl~dfg~~  203 (264)
                      ||||+++++|.+++..   ..+++..++.++.|++.||.|||+..       +++||||||+||+++.++.+||+|||++
T Consensus       113 v~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a  189 (337)
T 3mdy_A          113 ITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  189 (337)
T ss_dssp             EECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCc
Confidence            9999999999999954   36899999999999999999999752       8999999999999999999999999998


Q ss_pred             cccCCC--------CcccccccccccccccCCCCCCc------cceechHHHHHHHHhC
Q 024659          204 KNSRDG--------RSYSTNLAFTPPEYLRTGRVTPE------SVMYSFGTLLLDLLSG  248 (264)
Q Consensus       204 ~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~------~DiwslG~~l~el~~g  248 (264)
                      ......        ....+|+.|+|||++.+...+..      +||||||+++|||++|
T Consensus       190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg  248 (337)
T 3mdy_A          190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARR  248 (337)
T ss_dssp             EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTT
T ss_pred             eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhc
Confidence            754332        23468899999999987776655      9999999999999999

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=8.1e-39  Score=264.85  Aligned_cols=198  Identities=23%  Similarity=0.304  Sum_probs=161.3

Q ss_pred             CccccccccCCCCCCCeEEEEEeC--CCC--EEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcc
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE--NQF--RIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  128 (264)
                      ...|++++.||+|+||.||++.+.  ++.  .||+|+++...   ....+.+.+|++++++++||||+++++++.... .
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~   95 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M   95 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence            356889999999999999999842  233  68999987642   334567889999999999999999999997654 8


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      ++|+||+++++|.+++.. ....+++..+..++.|++.||.|||++ +++|+||||+||+++.++.+||+|||++.....
T Consensus        96 ~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~  173 (291)
T 1u46_A           96 KMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESK-RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ  173 (291)
T ss_dssp             EEEEECCTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred             eeeEecccCCCHHHHHHh-ccCCcCHHHHHHHHHHHHHHHHHHHhC-CcccCCCchheEEEcCCCCEEEccccccccccc
Confidence            899999999999999864 235689999999999999999999999 999999999999999999999999999876543


Q ss_pred             CC-------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          209 GR-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       209 ~~-------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ..       ...++..|+|||.+.+..++.++||||||+++++|++ |+.||....
T Consensus       174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~  229 (291)
T 1u46_A          174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN  229 (291)
T ss_dssp             -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred             cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC
Confidence            32       2345678999999998889999999999999999999 999987543

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=3e-38  Score=269.20  Aligned_cols=198  Identities=16%  Similarity=0.198  Sum_probs=155.3

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCc-------
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE-------  127 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-------  127 (264)
                      ++.|++++.||+|+||.||++.+ .+++.||+|++.... .......++++.+..++||||+++++++.....       
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  100 (360)
T 3e3p_A           22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIY  100 (360)
T ss_dssp             HTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEE
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhcccccccccee
Confidence            34577888899999999999996 568899999986543 223456678888899999999999999976443       


Q ss_pred             ceEEEecCCCCCHHHhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCceeeccCCCCeeeCC-CCCeEEcccCC
Q 024659          128 RLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCT--SKERALYHDLNAYRIVFDD-DVNPRLSCFGL  202 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lh--~~~~i~H~dl~~~Nil~~~-~~~~kl~dfg~  202 (264)
                      .++||||+++ +|.+.+..  .....+++..+..++.|++.||.|||  +. +++||||||+||+++. ++.+||+|||+
T Consensus       101 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~-~ivH~Dlkp~NIll~~~~~~~kl~Dfg~  178 (360)
T 3e3p_A          101 LNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV-NVCHRDIKPHNVLVNEADGTLKLCDFGS  178 (360)
T ss_dssp             EEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT-CCBCSCCCGGGEEEETTTTEEEECCCTT
T ss_pred             EEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC-CeecCcCCHHHEEEeCCCCcEEEeeCCC
Confidence            7899999976 46554432  24567889999999999999999999  88 9999999999999996 89999999999


Q ss_pred             CcccCCC---CcccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          203 MKNSRDG---RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       203 ~~~~~~~---~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      +......   ....+|+.|+|||++.+.. ++.++||||||+++|+|++|+.||....
T Consensus       179 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~  236 (360)
T 3e3p_A          179 AKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDN  236 (360)
T ss_dssp             CBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCC
Confidence            9865443   2346789999999997655 8999999999999999999999997654

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=6.5e-39  Score=291.61  Aligned_cols=190  Identities=23%  Similarity=0.293  Sum_probs=163.3

Q ss_pred             cCCCCCCCeEEEEEe---CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCC
Q 024659           64 EHGEKAPNVVYKGKL---ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND  138 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  138 (264)
                      +||+|+||.||+|.+   ..++.||+|+++...  ....+.+.+|++++++++||||+++++++. .+..++||||++++
T Consensus       376 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~g  454 (635)
T 4fl3_A          376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELG  454 (635)
T ss_dssp             EEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTTE
T ss_pred             EeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCCC
Confidence            689999999999964   346789999998643  233567999999999999999999999986 45688999999999


Q ss_pred             CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC-------c
Q 024659          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-------S  211 (264)
Q Consensus       139 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-------~  211 (264)
                      +|.+++.  ....+++..++.++.||+.||.|||++ +|+||||||+||+++.++.+||+|||+++......       .
T Consensus       455 ~L~~~l~--~~~~l~~~~~~~i~~qi~~~L~yLH~~-~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~  531 (635)
T 4fl3_A          455 PLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH  531 (635)
T ss_dssp             EHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----------
T ss_pred             CHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccC
Confidence            9999996  345789999999999999999999999 99999999999999999999999999987654322       2


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCcc
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHVS  257 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~~  257 (264)
                      ..++..|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus       532 ~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~  578 (635)
T 4fl3_A          532 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG  578 (635)
T ss_dssp             ---CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH
T ss_pred             CCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            234678999999998899999999999999999998 9999976543

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=4e-39  Score=272.10  Aligned_cols=194  Identities=23%  Similarity=0.309  Sum_probs=158.5

Q ss_pred             CCCccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHH--HhcCCCCCccccceeeEe-----CC
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARA--VGQLRNRRLANLLGCCCE-----GD  126 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~--l~~l~h~~i~~~~~~~~~-----~~  126 (264)
                      -+.+.|++++.||+|+||.||++.. +++.||+|++....   ...+..|.++  +..++|+||+++++.+..     ..
T Consensus        10 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~   85 (336)
T 3g2f_A           10 LDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM   85 (336)
T ss_dssp             CCTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred             cChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence            4567789999999999999999987 56799999997533   3334444444  555899999999986543     22


Q ss_pred             cceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--------CceeeccCCCCeeeCCCCCeEEc
Q 024659          127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE--------RALYHDLNAYRIVFDDDVNPRLS  198 (264)
Q Consensus       127 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~--------~i~H~dl~~~Nil~~~~~~~kl~  198 (264)
                      ..++||||+++++|.+++..   ...++..+..++.||+.||.|||+..        +++||||||+||+++.++.+||+
T Consensus        86 ~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~  162 (336)
T 3g2f_A           86 EYLLVMEYYPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS  162 (336)
T ss_dssp             EEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred             eEEEEEecCCCCcHHHHHhh---cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEe
Confidence            56899999999999999953   34588899999999999999999862        89999999999999999999999


Q ss_pred             ccCCCcccCCC------------CcccccccccccccccC-------CCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          199 CFGLMKNSRDG------------RSYSTNLAFTPPEYLRT-------GRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       199 dfg~~~~~~~~------------~~~~~~~~y~aPE~~~~-------~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      |||++......            ....+|+.|+|||++.+       ..++.++||||||+++|||++|..||..
T Consensus       163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~  237 (336)
T 3g2f_A          163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP  237 (336)
T ss_dssp             CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGST
T ss_pred             eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCC
Confidence            99999754322            13358899999999986       3467789999999999999999776643

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=4.6e-38  Score=267.61  Aligned_cols=194  Identities=16%  Similarity=0.230  Sum_probs=164.6

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh--hHHHHHHHHHHHhcCCCCCccccceeeEeCCc------
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDE------  127 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~------  127 (264)
                      ..|.+.+.||+|+||.||++.+ .+++.||+|.+......  ..+.+.+|+.++++++||||+++++++.....      
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  103 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  103 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence            4577888899999999999995 56899999999764322  24568899999999999999999999977654      


Q ss_pred             ceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      .+++|||+. ++|.+++.    ..+++..+..++.||+.||.|||++ |++|+||||+||+++.++.+||+|||++....
T Consensus       104 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~-~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  177 (353)
T 3coi_A          104 FYLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSA-GVVHRDLKPGNLAVNEDCELKILDFGLARHAD  177 (353)
T ss_dssp             CEEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred             EEEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence            499999997 57888763    3589999999999999999999999 99999999999999999999999999987654


Q ss_pred             CC-CcccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          208 DG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       208 ~~-~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .. ....++..|+|||++.+ ..++.++||||||+++++|++|+.||....
T Consensus       178 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  228 (353)
T 3coi_A          178 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD  228 (353)
T ss_dssp             ------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSC
T ss_pred             CCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            33 33467899999999987 568999999999999999999999997643

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=3.5e-38  Score=260.87  Aligned_cols=196  Identities=20%  Similarity=0.237  Sum_probs=170.1

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      ..|++++.||+|+||.||++... +++.||+|.+....  ....+.+.+|++++++++||||+++++++...+..++|+|
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  101 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence            45889999999999999999964 68899999986532  2345678899999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC---CCeEEcccCCCcccCCCC
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMKNSRDGR  210 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~---~~~kl~dfg~~~~~~~~~  210 (264)
                      |+++++|.+.+..  ...+++..++.++.|++.||.+||++ +++|+||+|+||+++.+   +.+||+|||++.......
T Consensus       102 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~  178 (287)
T 2wei_A          102 LYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKH-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT  178 (287)
T ss_dssp             CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS
T ss_pred             ccCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC
Confidence            9999999988863  34689999999999999999999999 99999999999999754   479999999987654432


Q ss_pred             ---cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 ---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 ---~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                         ...++..|+|||.+.+ .++.++||||||+++++|++|..||....
T Consensus       179 ~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~  226 (287)
T 2wei_A          179 KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN  226 (287)
T ss_dssp             SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCC
Confidence               3356889999999875 48999999999999999999999997543

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=3.4e-38  Score=262.19  Aligned_cols=188  Identities=21%  Similarity=0.276  Sum_probs=159.4

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEe-----------
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE-----------  124 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----------  124 (264)
                      +.|++++.||+|+||.||++.. .+++.||+|.+.... ...+.+.+|+.++++++||||+++++++.+           
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV   84 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence            3478888999999999999995 578899999996432 345678899999999999999999998865           


Q ss_pred             --CCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCC
Q 024659          125 --GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL  202 (264)
Q Consensus       125 --~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~  202 (264)
                        ....++||||+++++|.+++.. ....+++..++.++.|++.||.|||++ +++|+||||+||+++.++.+||+|||+
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dlkp~Nil~~~~~~~kl~dfg~  162 (303)
T 1zy4_A           85 KKKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQ-GIIHRDLKPMNIFIDESRNVKIGDFGL  162 (303)
T ss_dssp             -CEEEEEEEEECCCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred             ccCCceEEEEecCCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhC-CeecccCCHHhEEEcCCCCEEEeeCcc
Confidence              3457899999999999999964 345678889999999999999999999 999999999999999999999999999


Q ss_pred             CcccCCC------------------CcccccccccccccccCC-CCCCccceechHHHHHHHHh
Q 024659          203 MKNSRDG------------------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLS  247 (264)
Q Consensus       203 ~~~~~~~------------------~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~  247 (264)
                      +......                  ....++..|+|||++.+. .++.++||||||+++|+|++
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~  226 (303)
T 1zy4_A          163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY  226 (303)
T ss_dssp             CSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS
T ss_pred             hhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh
Confidence            8764321                  233578899999999865 58999999999999999998

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=2e-38  Score=265.91  Aligned_cols=197  Identities=19%  Similarity=0.251  Sum_probs=165.5

Q ss_pred             CCccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      .++.|++.+.||+|+||.||++.+.+  .+|+|.+....  ....+.+.+|+.++++++|+||+++++++.+.+..++++
T Consensus        31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~  108 (319)
T 2y4i_B           31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT  108 (319)
T ss_dssp             CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred             CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence            45678899999999999999999765  48999987543  222345778999999999999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----  208 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----  208 (264)
                      ||+++++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||||+||+++ ++.++|+|||++.....    
T Consensus       109 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~  185 (319)
T 2y4i_B          109 SLCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAK-GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG  185 (319)
T ss_dssp             BCCCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHT-TCCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred             ecccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence            99999999999964 345688999999999999999999999 999999999999998 67999999999765321    


Q ss_pred             -----CCcccccccccccccccC---------CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 -----GRSYSTNLAFTPPEYLRT---------GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 -----~~~~~~~~~y~aPE~~~~---------~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                           .....++..|+|||++.+         ..++.++||||||+++|||++|+.||....
T Consensus       186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~  247 (319)
T 2y4i_B          186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP  247 (319)
T ss_dssp             --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC
T ss_pred             ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                 122357889999999874         347889999999999999999999997544

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=2.8e-38  Score=267.43  Aligned_cols=191  Identities=17%  Similarity=0.220  Sum_probs=163.8

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhc--CCCCCccccceeeEeCC----cceE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQ--LRNRRLANLLGCCCEGD----ERLL  130 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~~i~~~~~~~~~~~----~~~l  130 (264)
                      ..|.+.+.||+|+||.||++.+. ++.||+|.+...   ....+.+|++++..  ++||||+++++++....    ..++
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~l  117 (342)
T 1b6c_B           42 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL  117 (342)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEE
T ss_pred             ccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEE
Confidence            34778888999999999999984 779999999643   34567788888877  78999999999998765    7899


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCceeeccCCCCeeeCCCCCeEEcccCC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT--------SKERALYHDLNAYRIVFDDDVNPRLSCFGL  202 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh--------~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~  202 (264)
                      ||||+++++|.+++..   ..+++..++.++.|++.||.|||        +. +++|+||||+||+++.++.+||+|||+
T Consensus       118 v~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~-~ivH~Dlkp~NIll~~~~~~kL~Dfg~  193 (342)
T 1b6c_B          118 VSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGL  193 (342)
T ss_dssp             EECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC-EEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred             EEeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC-CeeeCCCCHHHEEECCCCCEEEEECCC
Confidence            9999999999999964   36899999999999999999999        78 999999999999999999999999999


Q ss_pred             CcccCCC--------CcccccccccccccccCCC------CCCccceechHHHHHHHHhC----------CCCCCCC
Q 024659          203 MKNSRDG--------RSYSTNLAFTPPEYLRTGR------VTPESVMYSFGTLLLDLLSG----------KHIPPSH  255 (264)
Q Consensus       203 ~~~~~~~--------~~~~~~~~y~aPE~~~~~~------~~~~~DiwslG~~l~el~~g----------~~~~~~~  255 (264)
                      +......        ....++..|+|||++.+..      ++.++||||||+++|||++|          ..||...
T Consensus       194 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~  270 (342)
T 1b6c_B          194 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL  270 (342)
T ss_dssp             CEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred             ceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCcccc
Confidence            8754432        2346789999999998653      34689999999999999999          6677543

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=1.7e-38  Score=268.57  Aligned_cols=194  Identities=16%  Similarity=0.171  Sum_probs=145.0

Q ss_pred             ccccccc-CCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEe----CCcceEE
Q 024659           58 MENIVSE-HGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLLV  131 (264)
Q Consensus        58 ~~~~l~~-lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv  131 (264)
                      .|.++++ ||.|+||.||++.+. +++.||+|++....    ....+....++.+.|+||+++++++..    ....++|
T Consensus        29 ~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv  104 (336)
T 3fhr_A           29 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLII  104 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             eeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEE
Confidence            4677664 899999999999965 68999999996532    222233344667799999999999876    3458999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC---CCCeEEcccCCCcccCC
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~---~~~~kl~dfg~~~~~~~  208 (264)
                      |||+++++|.+++.......+++..++.++.|++.||.|||++ +++||||||+||+++.   ++.+||+|||++.....
T Consensus       105 ~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~-~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~  183 (336)
T 3fhr_A          105 MECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH-NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ  183 (336)
T ss_dssp             EECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred             EeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence            9999999999999765556799999999999999999999999 9999999999999975   45699999999976543


Q ss_pred             C--CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 G--RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 ~--~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .  ....+++.|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus       184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  233 (336)
T 3fhr_A          184 NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNT  233 (336)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----
T ss_pred             cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCcc
Confidence            2  33467899999999988889999999999999999999999996544

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=2.1e-38  Score=271.26  Aligned_cols=198  Identities=13%  Similarity=0.172  Sum_probs=168.2

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC-----------CCCccccceeeEe
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-----------NRRLANLLGCCCE  124 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~~i~~~~~~~~~  124 (264)
                      ..|.+++.||+|+||.||++.+ .+++.||+|++.... ...+.+.+|+.++++++           |+||+++++++..
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~   97 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   97 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence            4588999999999999999995 568899999997543 33456788999998886           7899999999976


Q ss_pred             CC----cceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeC------CCCC
Q 024659          125 GD----ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD------DDVN  194 (264)
Q Consensus       125 ~~----~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~------~~~~  194 (264)
                      .+    ..++++|++ +++|.+++.......+++..+..++.||+.||.|||++.+++||||||+||+++      ..+.
T Consensus        98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~  176 (373)
T 1q8y_A           98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQ  176 (373)
T ss_dssp             EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred             cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcce
Confidence            54    688999999 889999997655667999999999999999999999954899999999999994      3457


Q ss_pred             eEEcccCCCcccCCC-CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          195 PRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       195 ~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      +||+|||++...... ....+|+.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus       177 ~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  239 (373)
T 1q8y_A          177 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDE  239 (373)
T ss_dssp             EEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC----
T ss_pred             EEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCc
Confidence            999999999765433 34578999999999999899999999999999999999999997543

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=9.2e-38  Score=284.99  Aligned_cols=198  Identities=20%  Similarity=0.252  Sum_probs=168.9

Q ss_pred             CccccccccCCCCCCCeEEEEEeCC----CCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      ...|++.+.||+|+||.||+|.+..    +..||+|.+...... ..+.+.+|+.++++++||||+++++++. .+..++
T Consensus       389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~l  467 (656)
T 2j0j_A          389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI  467 (656)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred             cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEE
Confidence            3557888899999999999998642    467999998765433 3467899999999999999999999984 567899


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~  210 (264)
                      ||||+++++|.+++.. ....+++..++.++.|++.||.|||++ +++||||||+||+++.++.+||+|||+++......
T Consensus       468 v~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~  545 (656)
T 2j0j_A          468 IMELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST  545 (656)
T ss_dssp             EEECCTTCBHHHHHHH-TTTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC--
T ss_pred             EEEcCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccchHhEEEeCCCCEEEEecCCCeecCCCc
Confidence            9999999999999964 345689999999999999999999999 99999999999999999999999999998654432


Q ss_pred             -----cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          211 -----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       211 -----~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                           ...+++.|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus       546 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~  597 (656)
T 2j0j_A          546 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK  597 (656)
T ss_dssp             --------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred             ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCC
Confidence                 2345678999999998899999999999999999997 888887543

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=5.1e-38  Score=262.98  Aligned_cols=194  Identities=18%  Similarity=0.216  Sum_probs=165.2

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCC--CCCccccceeeEeCCcceEEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLR--NRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      ..|++++.||+|+||.||++.+.+++.||+|.+....  ....+.+.+|++++.+++  |+||+++++++...+..+++|
T Consensus        28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  107 (313)
T 3cek_A           28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  107 (313)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEE
T ss_pred             ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEE
Confidence            5588899999999999999998889999999997543  234567889999999997  599999999999999999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---  209 (264)
                      | +.+++|.+++..  ...+++..+..++.|++.||.|||++ +++|+||||+||++++ +.+||+|||++......   
T Consensus       108 e-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~  182 (313)
T 3cek_A          108 E-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTS  182 (313)
T ss_dssp             C-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEET-TEEEECCCSSSCC-------
T ss_pred             e-cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcccEEEEC-CeEEEeeccccccccCcccc
Confidence            9 557899999974  45789999999999999999999999 9999999999999964 89999999999765432   


Q ss_pred             ---CcccccccccccccccC-----------CCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 ---RSYSTNLAFTPPEYLRT-----------GRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 ---~~~~~~~~y~aPE~~~~-----------~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                         ....++..|+|||.+.+           ..++.++||||||+++|+|++|+.||...
T Consensus       183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  242 (313)
T 3cek_A          183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI  242 (313)
T ss_dssp             -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhH
Confidence               23467899999999875           36888999999999999999999999754

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=4.5e-38  Score=288.91  Aligned_cols=191  Identities=18%  Similarity=0.209  Sum_probs=166.8

Q ss_pred             ccccccccCCCCCCCeEEEEEeC--CCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCc-----c
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE--NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE-----R  128 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-----~  128 (264)
                      ..|++++.||+|+||.||++.+.  +++.||+|.+..... .....+.+|++++.+++||||+++++++...+.     .
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~  159 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG  159 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence            56889999999999999999964  588999999876543 334568899999999999999999999987665     6


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      ++||||+++++|.+++..    .+++..++.++.||+.||.|||++ ||+||||||+||+++.+ .+||+|||+++....
T Consensus       160 ~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~-giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~  233 (681)
T 2pzi_A          160 YIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSI-GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS  233 (681)
T ss_dssp             EEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred             EEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC-CCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence            999999999999887642    699999999999999999999999 99999999999999975 899999999998777


Q ss_pred             CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          209 GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       209 ~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      .....+|+.|+|||++.+. ++.++||||||+++++|++|.+||..
T Consensus       234 ~~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~  278 (681)
T 2pzi_A          234 FGYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNG  278 (681)
T ss_dssp             CSCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETT
T ss_pred             CCccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcc
Confidence            7777899999999998765 48899999999999999999988764

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=1.2e-37  Score=262.23  Aligned_cols=199  Identities=18%  Similarity=0.188  Sum_probs=151.0

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh-hHHHHHHHHH-HHhcCCCCCccccceeeEeCCcceEEE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEAR-AVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      .+.|++++.||+|+||.||++.. .+++.||+|++...... ....+..|+. +++.++||||+++++++...+..++||
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            35678888999999999999996 46889999999865432 2344555665 677789999999999999999999999


Q ss_pred             ecCCCCCHHHhhhc---CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC
Q 024659          133 EYMPNDTLAKHLFH---WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       133 e~~~~~sL~~~l~~---~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~  209 (264)
                      ||+.+ +|.+++..   .....+++..+..++.|++.||.|||+..+++|+||||+||+++.++.+||+|||++......
T Consensus       101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~  179 (327)
T 3aln_A          101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS  179 (327)
T ss_dssp             CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC----
T ss_pred             eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccc
Confidence            99976 78877652   235678999999999999999999998548999999999999999999999999998765432


Q ss_pred             ---Ccccccccccccccc----cCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 ---RSYSTNLAFTPPEYL----RTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 ---~~~~~~~~y~aPE~~----~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                         ....++..|+|||++    .+..++.++||||||+++|+|++|+.||...
T Consensus       180 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  232 (327)
T 3aln_A          180 IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKW  232 (327)
T ss_dssp             --------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC
T ss_pred             cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence               223678999999998    4556899999999999999999999999753

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=2.7e-38  Score=265.65  Aligned_cols=198  Identities=18%  Similarity=0.248  Sum_probs=169.7

Q ss_pred             CCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh------hHHHHHHHHHHHhcCC--CCCccccceeeEeC
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLR--NRRLANLLGCCCEG  125 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~  125 (264)
                      ..+.|++++.||+|+||.||++.+ .+++.||+|.+......      ....+.+|+.++++++  |+||+++++++...
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~  120 (320)
T 3a99_A           41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP  120 (320)
T ss_dssp             CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred             ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence            345688999999999999999994 56889999999754321      1234667999999996  59999999999999


Q ss_pred             CcceEEEecCCC-CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeC-CCCCeEEcccCCC
Q 024659          126 DERLLVAEYMPN-DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCFGLM  203 (264)
Q Consensus       126 ~~~~lv~e~~~~-~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~-~~~~~kl~dfg~~  203 (264)
                      +..++|+|++.+ ++|.+++..  ...+++..++.++.|++.||.|||+. +++||||||+||+++ +++.+||+|||++
T Consensus       121 ~~~~lv~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~  197 (320)
T 3a99_A          121 DSFVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG  197 (320)
T ss_dssp             SEEEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred             CcEEEEEEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence            999999999976 899999863  45689999999999999999999999 999999999999999 7799999999998


Q ss_pred             cccCCC--CcccccccccccccccCCCC-CCccceechHHHHHHHHhCCCCCCCC
Q 024659          204 KNSRDG--RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       204 ~~~~~~--~~~~~~~~y~aPE~~~~~~~-~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ......  ....++..|+|||++.+..+ +.++||||||+++|||++|+.||...
T Consensus       198 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  252 (320)
T 3a99_A          198 ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD  252 (320)
T ss_dssp             EECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH
T ss_pred             cccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCCh
Confidence            865443  23467899999999987775 67899999999999999999998643

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.5e-38  Score=264.73  Aligned_cols=195  Identities=18%  Similarity=0.260  Sum_probs=162.1

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh------hHHHHHHHHHHHhcC----CCCCccccceeeEeC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP------DARQFLEEARAVGQL----RNRRLANLLGCCCEG  125 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l----~h~~i~~~~~~~~~~  125 (264)
                      +.|++++.||+|+||.||++.+ .+++.||+|.+......      ....+.+|+.++.++    +|+||+++++++...
T Consensus        31 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~  110 (312)
T 2iwi_A           31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQ  110 (312)
T ss_dssp             --CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC---
T ss_pred             hceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecC
Confidence            4578888999999999999985 56889999999765322      122355788888888    899999999999988


Q ss_pred             CcceEEEec-CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeC-CCCCeEEcccCCC
Q 024659          126 DERLLVAEY-MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCFGLM  203 (264)
Q Consensus       126 ~~~~lv~e~-~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~-~~~~~kl~dfg~~  203 (264)
                      +..++|+|+ +.+++|.+++..  ...+++..++.++.|++.||.|||+. +++|+||||+||+++ .++.+||+|||++
T Consensus       111 ~~~~~v~e~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~kl~dfg~~  187 (312)
T 2iwi_A          111 EGFMLVLERPLPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSR-GVVHRDIKDENILIDLRRGCAKLIDFGSG  187 (312)
T ss_dssp             --CEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHH-TEECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred             CeEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChhhEEEeCCCCeEEEEEcchh
Confidence            899999999 788999999974  34689999999999999999999999 999999999999999 7899999999998


Q ss_pred             cccCCC--CcccccccccccccccCCCC-CCccceechHHHHHHHHhCCCCCCC
Q 024659          204 KNSRDG--RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       204 ~~~~~~--~~~~~~~~y~aPE~~~~~~~-~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      ......  ....++..|+|||++.+..+ +.++||||||+++|+|++|+.||..
T Consensus       188 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  241 (312)
T 2iwi_A          188 ALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER  241 (312)
T ss_dssp             EECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred             hhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCC
Confidence            765433  33467899999999987776 4589999999999999999999864

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=8.6e-38  Score=282.29  Aligned_cols=200  Identities=20%  Similarity=0.229  Sum_probs=170.3

Q ss_pred             CCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEe------CC
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCE------GD  126 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~  126 (264)
                      .+..|++++.||.|+||.||++.+ .+++.||+|++.... ....+.+.+|++++++++||||+++++++..      .+
T Consensus        12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~   91 (676)
T 3qa8_A           12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND   91 (676)
T ss_dssp             -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred             CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence            346788999999999999999995 568899999998653 2335668899999999999999999998754      56


Q ss_pred             cceEEEecCCCCCHHHhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCC---eEEcccCC
Q 024659          127 ERLLVAEYMPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN---PRLSCFGL  202 (264)
Q Consensus       127 ~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~---~kl~dfg~  202 (264)
                      ..++||||+++++|.+++.... ...+++..++.++.|++.||.|||+. |++|+||||+||+++.++.   ++|+|||+
T Consensus        92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~-gIVHrDLKP~NILl~~~g~~~~vKL~DFG~  170 (676)
T 3qa8_A           92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN-RIIHRDLKPENIVLQPGPQRLIHKIIDLGY  170 (676)
T ss_dssp             SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT-TBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred             eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHeEeecCCCceeEEEccccc
Confidence            7899999999999999997532 23688899999999999999999999 9999999999999997654   99999999


Q ss_pred             CcccCCC---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          203 MKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       203 ~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      +......   ....++..|+|||.+.+..++.++||||||+++|+|++|..||...
T Consensus       171 a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~  226 (676)
T 3qa8_A          171 AKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN  226 (676)
T ss_dssp             CCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcc
Confidence            9865443   3346789999999999889999999999999999999999999654

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=4.6e-39  Score=271.98  Aligned_cols=192  Identities=13%  Similarity=0.056  Sum_probs=158.2

Q ss_pred             CccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCC--------hhHHHHHHHHHHHhcCC---------CCCcc--
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--------PDARQFLEEARAVGQLR---------NRRLA--  116 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~---------h~~i~--  116 (264)
                      ...|++++.||+|+||.||++++ +++.||+|++.....        ...+.+.+|+.+++.++         |+||+  
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            35588889999999999999998 678999999986532        22367888999888886         55554  


Q ss_pred             ---------------ccceeeEe-------------CCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHH
Q 024659          117 ---------------NLLGCCCE-------------GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEAL  168 (264)
Q Consensus       117 ---------------~~~~~~~~-------------~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l  168 (264)
                                     ++++++.+             ....++||||+++|++.+.+.   ...+++..++.++.||+.||
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~---~~~~~~~~~~~i~~qi~~aL  174 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR---TKLSSLATAKSILHQLTASL  174 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT---TTCCCHHHHHHHHHHHHHHH
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH---hcCCCHHHHHHHHHHHHHHH
Confidence                           44444443             678999999999997766663   35689999999999999999


Q ss_pred             HHHh-cCCCceeeccCCCCeeeCCCC--------------------CeEEcccCCCcccCCCCcccccccccccccccCC
Q 024659          169 EYCT-SKERALYHDLNAYRIVFDDDV--------------------NPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTG  227 (264)
Q Consensus       169 ~~lh-~~~~i~H~dl~~~Nil~~~~~--------------------~~kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~  227 (264)
                      .||| ++ +|+||||||+|||++.++                    .+||+|||+++..... ...+|+.|+|||++.+.
T Consensus       175 ~~lH~~~-~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~g~  252 (336)
T 2vuw_A          175 AVAEASL-RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLFTGD  252 (336)
T ss_dssp             HHHHHHH-CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGGCCC
T ss_pred             HHHHHhC-CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhhcCC
Confidence            9999 88 999999999999999876                    8999999999866543 45789999999999876


Q ss_pred             CCCCccceechHHH-HHHHHhCCCCCCC
Q 024659          228 RVTPESVMYSFGTL-LLDLLSGKHIPPS  254 (264)
Q Consensus       228 ~~~~~~DiwslG~~-l~el~~g~~~~~~  254 (264)
                      . +.++|||||+++ .+++++|..||..
T Consensus       253 ~-~~~~Diwsl~~~~~~~~~~g~~p~~~  279 (336)
T 2vuw_A          253 G-DYQFDIYRLMKKENNNRWGEYHPYSN  279 (336)
T ss_dssp             S-SHHHHHHHHHHHHHTTCTTSCCTHHH
T ss_pred             C-ccceehhhhhCCCCcccccccCCCcc
Confidence            6 889999998777 7778889988853

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=5.2e-37  Score=257.07  Aligned_cols=197  Identities=18%  Similarity=0.233  Sum_probs=152.1

Q ss_pred             CCccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChh-H-HHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPD-A-RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~-~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      .++.|++++.||+|+||.||++.+. +++.||+|.+....... . +.+.++..+++.++||||+++++++...+..++|
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv  102 (318)
T 2dyl_A           23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA  102 (318)
T ss_dssp             CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence            3566889999999999999999964 68899999998654332 2 2344555678888999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~-~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-  209 (264)
                      |||+ ++.+..+... ....+++..+..++.|++.||.|||+ . +++|+||||+||+++.++.+||+|||++...... 
T Consensus       103 ~e~~-~~~~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~-~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~  179 (318)
T 2dyl_A          103 MELM-GTCAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEKH-GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK  179 (318)
T ss_dssp             ECCC-SEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHHH-CCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred             Eecc-CCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhhC-CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence            9999 5556555532 35678999999999999999999998 5 8999999999999999999999999998754332 


Q ss_pred             --Cccccccccccccccc-----CCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          210 --RSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~~-----~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                        ....+++.|+|||++.     ...++.++||||||+++|+|++|+.||..
T Consensus       180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  231 (318)
T 2dyl_A          180 AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN  231 (318)
T ss_dssp             -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCC
Confidence              2346789999999995     44588999999999999999999999975

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=5e-37  Score=267.73  Aligned_cols=192  Identities=16%  Similarity=0.128  Sum_probs=155.7

Q ss_pred             cccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEEEecCC
Q 024659           58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      .|.+.+.||+|+||+|+.....+++.||+|++......   .+.+|+++++++ +||||+++++++.+....++||||+.
T Consensus        25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~  101 (432)
T 3p23_A           25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA  101 (432)
T ss_dssp             EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence            46677788999999976555667889999999765432   355799999999 79999999999999999999999996


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC-----CCCeEEcccCCCcccCCC--
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-----DVNPRLSCFGLMKNSRDG--  209 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~-----~~~~kl~dfg~~~~~~~~--  209 (264)
                       ++|.+++.. .........+..++.||+.||.|||+. +++||||||+||+++.     ...+||+|||+++.....  
T Consensus       102 -g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~  178 (432)
T 3p23_A          102 -ATLQEYVEQ-KDFAHLGLEPITLLQQTTSGLAHLHSL-NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH  178 (432)
T ss_dssp             -EEHHHHHHS-SSCCCCSSCHHHHHHHHHHHHHHHHHT-TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred             -CCHHHHHHh-cCCCccchhHHHHHHHHHHHHHHHHHC-cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence             589999965 333444556678999999999999999 9999999999999953     245889999998765432  


Q ss_pred             -----CcccccccccccccccC---CCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          210 -----RSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       210 -----~~~~~~~~y~aPE~~~~---~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                           ....+|+.|+|||++.+   ..++.++|||||||++|||++ |..||...
T Consensus       179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~  233 (432)
T 3p23_A          179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKS  233 (432)
T ss_dssp             -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBST
T ss_pred             ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchh
Confidence                 23468999999999974   457889999999999999999 88888544

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=3.7e-37  Score=268.93  Aligned_cols=190  Identities=19%  Similarity=0.145  Sum_probs=152.7

Q ss_pred             ccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEEEecCCCCC
Q 024659           61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPNDT  139 (264)
Q Consensus        61 ~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~s  139 (264)
                      +.+.||+|+||+||.+...+++.||+|++...   ..+.+.+|+++++++ +||||+++++++.+....++||||+. ++
T Consensus        19 ~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gs   94 (434)
T 2rio_A           19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LN   94 (434)
T ss_dssp             EEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EE
T ss_pred             ccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CC
Confidence            34568999999998777777899999998653   245678899999886 89999999999999999999999996 59


Q ss_pred             HHHhhhcCCCCC-----CCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC-------------CCeEEcccC
Q 024659          140 LAKHLFHWETQP-----MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-------------VNPRLSCFG  201 (264)
Q Consensus       140 L~~~l~~~~~~~-----~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~-------------~~~kl~dfg  201 (264)
                      |.+++.......     .++..++.++.||+.||.|||++ +++||||||+||+++.+             +.+||+|||
T Consensus        95 L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG  173 (434)
T 2rio_A           95 LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL-KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG  173 (434)
T ss_dssp             HHHHHHTC------------CCHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCT
T ss_pred             HHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEecCcccccccccCCCceEEEEcccc
Confidence            999996432111     12234578999999999999999 99999999999999653             489999999


Q ss_pred             CCcccCCCC--------cccccccccccccccC-------CCCCCccceechHHHHHHHHh-CCCCCCCC
Q 024659          202 LMKNSRDGR--------SYSTNLAFTPPEYLRT-------GRVTPESVMYSFGTLLLDLLS-GKHIPPSH  255 (264)
Q Consensus       202 ~~~~~~~~~--------~~~~~~~y~aPE~~~~-------~~~~~~~DiwslG~~l~el~~-g~~~~~~~  255 (264)
                      +++......        ...+|+.|+|||++.+       ..++.++|||||||++|||++ |..||...
T Consensus       174 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~  243 (434)
T 2rio_A          174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK  243 (434)
T ss_dssp             TCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCST
T ss_pred             cceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCc
Confidence            998654432        3468899999999975       568999999999999999999 88888654

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=6.3e-36  Score=247.40  Aligned_cols=173  Identities=14%  Similarity=0.118  Sum_probs=150.5

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCCh---hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      ..|++++.||+|+||.||++.+. +++.||+|.+......   ..+.+.+|+..+.+++|+||+++++++...+..++||
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            35888899999999999999965 4889999999865432   2467889999999999999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCcc
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY  212 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~~  212 (264)
                      ||+++++|.+++..   . .....+..++.|++.||.|||++ |++||||||+||+++.++.+||++++           
T Consensus       111 e~~~g~~L~~~l~~---~-~~~~~~~~i~~ql~~aL~~lH~~-givH~Dikp~NIll~~~g~~kl~~~~-----------  174 (286)
T 3uqc_A          111 EWIRGGSLQEVADT---S-PSPVGAIRAMQSLAAAADAAHRA-GVALSIDHPSRVRVSIDGDVVLAYPA-----------  174 (286)
T ss_dssp             ECCCEEEHHHHHTT---C-CCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEEETTSCEEECSCC-----------
T ss_pred             EecCCCCHHHHHhc---C-CChHHHHHHHHHHHHHHHHHHHC-CCccCCCCcccEEEcCCCCEEEEecc-----------
Confidence            99999999999852   2 35557889999999999999999 99999999999999999999998554           


Q ss_pred             cccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       213 ~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                           |++       .++.++||||||+++|||++|+.||.....
T Consensus       175 -----~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~  207 (286)
T 3uqc_A          175 -----TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGV  207 (286)
T ss_dssp             -----CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSB
T ss_pred             -----ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence                 233       368899999999999999999999986543

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=1.4e-35  Score=246.70  Aligned_cols=176  Identities=16%  Similarity=0.156  Sum_probs=151.0

Q ss_pred             cccccc-ccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHH-hcCCCCCccccceeeEe----CCcce
Q 024659           57 AMENIV-SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAV-GQLRNRRLANLLGCCCE----GDERL  129 (264)
Q Consensus        57 ~~~~~l-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~~i~~~~~~~~~----~~~~~  129 (264)
                      ..|.++ +.||+|+||.||++.. .+++.||+|.+..     ...+.+|++++ +.++||||+++++++..    ....+
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   91 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   91 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence            446677 5589999999999995 5688999999964     24566788887 55689999999999977    56789


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC---CCCeEEcccCCCccc
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNS  206 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~---~~~~kl~dfg~~~~~  206 (264)
                      +||||+++++|.+++.......+++..++.++.|++.||.|||+. +++|+||||+||+++.   ++.++|+|||++...
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  170 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET  170 (299)
T ss_dssp             EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred             EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEecCCCCCcEEEecccccccc
Confidence            999999999999999865556799999999999999999999999 9999999999999997   788999999988643


Q ss_pred             CCCCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          207 RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       207 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .                  +..++.++||||||+++|||++|+.||....
T Consensus       171 ~------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~  202 (299)
T 3m2w_A          171 T------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNH  202 (299)
T ss_dssp             T------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--
T ss_pred             c------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCc
Confidence            2                  2457889999999999999999999996543

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=4.5e-36  Score=260.52  Aligned_cols=196  Identities=15%  Similarity=0.097  Sum_probs=151.7

Q ss_pred             ccccccCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCChh---HHHHHHHHHHHhcCCC-CCcccccee------------
Q 024659           59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRN-RRLANLLGC------------  121 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h-~~i~~~~~~------------  121 (264)
                      +.+.+.||+|+||.||+|. ..+++.||+|++.......   .+.+.+|+.+++.++| +|...+..+            
T Consensus        80 ~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  159 (413)
T 3dzo_A           80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD  159 (413)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEEC
T ss_pred             EEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhccc
Confidence            5566678999999999999 4568899999998443222   5678899999999987 332211111            


Q ss_pred             ---------eEe-----CCcceEEEecCCCCCHHHhhh-----cCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeecc
Q 024659          122 ---------CCE-----GDERLLVAEYMPNDTLAKHLF-----HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL  182 (264)
Q Consensus       122 ---------~~~-----~~~~~lv~e~~~~~sL~~~l~-----~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl  182 (264)
                               +..     ....+++|+.. +++|.+++.     ......+++..++.++.||+.||.|||++ +|+||||
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~iiHrDi  237 (413)
T 3dzo_A          160 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY-GLVHTYL  237 (413)
T ss_dssp             CC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT-TEECSCC
T ss_pred             CCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCc
Confidence                     111     12346667665 678999884     22344577889999999999999999999 9999999


Q ss_pred             CCCCeeeCCCCCeEEcccCCCcccCCC-Ccccccccccccccc----------cCCCCCCccceechHHHHHHHHhCCCC
Q 024659          183 NAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYL----------RTGRVTPESVMYSFGTLLLDLLSGKHI  251 (264)
Q Consensus       183 ~~~Nil~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~y~aPE~~----------~~~~~~~~~DiwslG~~l~el~~g~~~  251 (264)
                      ||+||+++.++.+||+|||+++..... ....+ +.|+|||++          .+..++.++|||||||++|||++|+.|
T Consensus       238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~P  316 (413)
T 3dzo_A          238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP  316 (413)
T ss_dssp             CGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCC
T ss_pred             ccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCC
Confidence            999999999999999999998765433 23456 999999999          444588899999999999999999999


Q ss_pred             CCCCcc
Q 024659          252 PPSHVS  257 (264)
Q Consensus       252 ~~~~~~  257 (264)
                      |.....
T Consensus       317 f~~~~~  322 (413)
T 3dzo_A          317 NTDDAA  322 (413)
T ss_dssp             CCTTGG
T ss_pred             CCCcch
Confidence            976543

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.98  E-value=1.2e-33  Score=253.86  Aligned_cols=179  Identities=12%  Similarity=0.063  Sum_probs=126.2

Q ss_pred             cCCCCCCCeEEEEE-eCCCCEEEEEEeCCCCC----------hhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcceEE
Q 024659           64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW----------PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~----------~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      ....|++|.+..++ ..-|+.+++|.+.....          ...+++.+|+++|+++ .|+||+++++++.++...|||
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            34566666666555 44577899999975421          1235689999999999 699999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC-
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-  210 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-  210 (264)
                      |||++|++|.+++.  ...+++..   .|+.||+.||.|+|++ ||+||||||+|||++.++.+||+|||+++...... 
T Consensus       321 MEyv~G~~L~d~i~--~~~~l~~~---~I~~QIl~AL~ylH~~-GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~  394 (569)
T 4azs_A          321 MEKLPGRLLSDMLA--AGEEIDRE---KILGSLLRSLAALEKQ-GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS  394 (569)
T ss_dssp             EECCCSEEHHHHHH--TTCCCCHH---HHHHHHHHHHHHHHHT-TCEESCCCGGGEEECTTSCEEECCCTTEESCC---C
T ss_pred             EecCCCCcHHHHHH--hCCCCCHH---HHHHHHHHHHHHHHHC-CceeccCchHhEEECCCCCEEEeecccCeeCCCCCc
Confidence            99999999999997  44566654   4789999999999999 99999999999999999999999999998654432 


Q ss_pred             ---cccccccccccccccCCCCCCccceechHHHHHHHHhCC
Q 024659          211 ---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK  249 (264)
Q Consensus       211 ---~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~  249 (264)
                         ...+|+.|+|||++.+ .+..++|+||+|++++++.++.
T Consensus       395 ~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~  435 (569)
T 4azs_A          395 WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPW  435 (569)
T ss_dssp             CSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred             cccCceechhhccHHHhCC-CCCCcccccccccchhhhcccc
Confidence               3467899999999975 4567899999999877665543

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.96  E-value=1.8e-29  Score=225.39  Aligned_cols=176  Identities=14%  Similarity=0.125  Sum_probs=142.8

Q ss_pred             ccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCCh--h------HHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           63 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--D------ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~------~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      +.||+|+||.||++... +..+++|+.......  .      .+++.+|++++++++||||+++..++...+..++||||
T Consensus       342 ~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~  420 (540)
T 3en9_A          342 HLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSY  420 (540)
T ss_dssp             ------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEEC
T ss_pred             CEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEEC
Confidence            45799999999999544 557888876543211  1      23478999999999999999777777788889999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-----
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----  209 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-----  209 (264)
                      +++++|.+++..          +..++.|++.||.|||++ +++||||||+||+++.  .+||+|||+++.....     
T Consensus       421 ~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~-gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~  487 (540)
T 3en9_A          421 INGKLAKDVIED----------NLDIAYKIGEIVGKLHKN-DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV  487 (540)
T ss_dssp             CCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT-TEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHH
T ss_pred             CCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC-cCccCCCCHHHEEECC--eEEEEECccCEECCCcccccc
Confidence            999999999853          568999999999999999 9999999999999998  9999999999876553     


Q ss_pred             ------CcccccccccccccccC--CCCCCccceechHHHHHHHHhCCCCC
Q 024659          210 ------RSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIP  252 (264)
Q Consensus       210 ------~~~~~~~~y~aPE~~~~--~~~~~~~DiwslG~~l~el~~g~~~~  252 (264)
                            ....+|+.|+|||++..  ..|+..+|+||..+-.++-+.++..+
T Consensus       488 ~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          488 DLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             chhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence                  23467899999999986  45888899999999888887776554

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.93  E-value=1.6e-26  Score=190.48  Aligned_cols=160  Identities=16%  Similarity=0.057  Sum_probs=124.9

Q ss_pred             CCCccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCC------------------hhHHHHHHHHHHHhcCCCCCc
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW------------------PDARQFLEEARAVGQLRNRRL  115 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~l~h~~i  115 (264)
                      +.-..|.+.+.||.|+||.||++.+.+++.||+|.++....                  .....+.+|++++++++  | 
T Consensus        87 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-  163 (282)
T 1zar_A           87 RSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-  163 (282)
T ss_dssp             HTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-
T ss_pred             hCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-
Confidence            33344556688999999999999997789999999975321                  12456889999999999  5 


Q ss_pred             cccceeeEeCCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCe
Q 024659          116 ANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP  195 (264)
Q Consensus       116 ~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~  195 (264)
                      +++.+++.. +..++||||+++++|.+ +.      .  .....++.|++.||.+||+. |++||||||+||+++ ++.+
T Consensus       164 ~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~------~--~~~~~i~~qi~~~l~~lH~~-giiHrDlkp~NILl~-~~~v  231 (282)
T 1zar_A          164 LAVPKVYAW-EGNAVLMELIDAKELYR-VR------V--ENPDEVLDMILEEVAKFYHR-GIVHGDLSQYNVLVS-EEGI  231 (282)
T ss_dssp             SSSCCEEEE-ETTEEEEECCCCEEGGG-CC------C--SCHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEEEE-TTEE
T ss_pred             CCcCeEEec-cceEEEEEecCCCcHHH-cc------h--hhHHHHHHHHHHHHHHHHHC-CCEeCCCCHHHEEEE-CCcE
Confidence            777776543 56799999999999988 42      1  12447999999999999999 999999999999999 9999


Q ss_pred             EEcccCCCcccCCCCcccccccccccccccC----------CCCCCccceec
Q 024659          196 RLSCFGLMKNSRDGRSYSTNLAFTPPEYLRT----------GRVTPESVMYS  237 (264)
Q Consensus       196 kl~dfg~~~~~~~~~~~~~~~~y~aPE~~~~----------~~~~~~~Diws  237 (264)
                      ||+|||++...         ..++|||++..          ..+...+|+|.
T Consensus       232 kl~DFG~a~~~---------~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~  274 (282)
T 1zar_A          232 WIIDFPQSVEV---------GEEGWREILERDVRNIITYFSRTYRTEKDINS  274 (282)
T ss_dssp             EECCCTTCEET---------TSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred             EEEECCCCeEC---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence            99999998643         34578888753          23455566654

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.87  E-value=3.9e-22  Score=162.18  Aligned_cols=146  Identities=13%  Similarity=0.048  Sum_probs=109.6

Q ss_pred             HhCCCccccccccCCCCCCCeEEEEEe-CCCCE--EEEEEeCCCCCh------------------------hHHHHHHHH
Q 024659           52 ATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFR--IAVKRFNRSAWP------------------------DARQFLEEA  104 (264)
Q Consensus        52 ~~~~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~e~  104 (264)
                      ..+.-..|.+.+.||+|+||.||+|.+ .+|+.  ||+|+++.....                        ....+.+|+
T Consensus        42 ~~~~~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~  121 (258)
T 1zth_A           42 LSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEF  121 (258)
T ss_dssp             HHHTTSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHH
T ss_pred             HHhCCCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHH
Confidence            333334467788899999999999997 67888  999987653211                        012578899


Q ss_pred             HHHhcCCCCCccccceeeEeCCcceEEEecCCC-C----CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCce
Q 024659          105 RAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN-D----TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT-SKERAL  178 (264)
Q Consensus       105 ~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~----sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh-~~~~i~  178 (264)
                      +.+.++.|+++.....+..  +..++||||+.+ |    +|.+....     .++..+..++.|++.+|.+|| +. |++
T Consensus       122 ~~l~~l~~~~i~~p~~~~~--~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~-giv  193 (258)
T 1zth_A          122 RNLERAKEAGVSVPQPYTY--MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEA-ELV  193 (258)
T ss_dssp             HHHHHHHHTTCCCCCEEEE--ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTS-CEE
T ss_pred             HHHHHHHhCCCCCCeEEEc--CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHC-CEE
Confidence            9999998876522222221  357899999942 3    67766532     234467789999999999999 88 999


Q ss_pred             eeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          179 YHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       179 H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      ||||||+|||++.  .++|+|||++....
T Consensus       194 HrDlkp~NILl~~--~~~liDFG~a~~~~  220 (258)
T 1zth_A          194 HADLSEYNIMYID--KVYFIDMGQAVTLR  220 (258)
T ss_dssp             CSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred             eCCCCHHHEEEcC--cEEEEECcccccCC
Confidence            9999999999998  99999999997653

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.77  E-value=2.1e-19  Score=152.47  Aligned_cols=147  Identities=10%  Similarity=0.041  Sum_probs=105.1

Q ss_pred             HHHHhCCCccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCCh--------------hHH--------HHHHHHHH
Q 024659           49 LRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--------------DAR--------QFLEEARA  106 (264)
Q Consensus        49 ~~~~~~~~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------~~~--------~~~~e~~~  106 (264)
                      +..-.+.-..|.+.++||.|++|.||+|...+|+.||+|+++.....              ...        ...+|...
T Consensus        87 L~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~n  166 (397)
T 4gyi_A           87 LHTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAF  166 (397)
T ss_dssp             HHHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHH
Confidence            34444444558899999999999999999989999999987642100              001        12356667


Q ss_pred             HhcCCCCCccccceeeEeCCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCC
Q 024659          107 VGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR  186 (264)
Q Consensus       107 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~N  186 (264)
                      |.++.+.++.....+..  ...+|||||+++.+|.++..      .+  ....+..|++.+|.+||+. |+|||||||.|
T Consensus       167 L~rL~~~gv~vp~p~~~--~~~~LVME~i~G~~L~~l~~------~~--~~~~l~~qll~~l~~lH~~-gIVHrDLKp~N  235 (397)
T 4gyi_A          167 MKALYEEGFPVPEPIAQ--SRHTIVMSLVDALPMRQVSS------VP--DPASLYADLIALILRLAKH-GLIHGDFNEFN  235 (397)
T ss_dssp             HHHHHHTTCSCCCEEEE--ETTEEEEECCSCEEGGGCCC------CS--CHHHHHHHHHHHHHHHHHT-TEECSCCSTTS
T ss_pred             HHHHHhcCCCCCeeeec--cCceEEEEecCCccHhhhcc------cH--HHHHHHHHHHHHHHHHHHC-CCcCCCCCHHH
Confidence            77775444432222222  23479999999988876542      11  2356789999999999999 99999999999


Q ss_pred             eeeCCCC----------CeEEcccCCCccc
Q 024659          187 IVFDDDV----------NPRLSCFGLMKNS  206 (264)
Q Consensus       187 il~~~~~----------~~kl~dfg~~~~~  206 (264)
                      ||+++++          .+.|+||+-+...
T Consensus       236 ILl~~dgd~~d~~~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          236 ILIREEKDAEDPSSITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             EEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred             EEEeCCCCcccccccccceEEEEeCCcccC
Confidence            9998776          3899999977543

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.51  E-value=4.7e-14  Score=114.47  Aligned_cols=139  Identities=14%  Similarity=-0.017  Sum_probs=107.0

Q ss_pred             ccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC-CCCccccceeeEeCCcceEEEecCCC
Q 024659           59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMPN  137 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~  137 (264)
                      |.+...++.|+.+.||++... +..+++|............+.+|+++++.+. +..+.++++++...+..++|||+++|
T Consensus        16 ~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G   94 (263)
T 3tm0_A           16 YRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADG   94 (263)
T ss_dssp             SEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSS
T ss_pred             ceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCC
Confidence            556666688888999999855 4689999987532122345778999999885 56788899998888889999999999


Q ss_pred             CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 024659          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-------------------------------------------  174 (264)
Q Consensus       138 ~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~-------------------------------------------  174 (264)
                      .+|.+.+.       +......++.+++.++..||+.                                           
T Consensus        95 ~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (263)
T 3tm0_A           95 VLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDP  167 (263)
T ss_dssp             EEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSH
T ss_pred             eehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCH
Confidence            99987641       1122346788899999999981                                           


Q ss_pred             ---------------CCceeeccCCCCeeeCCCCCeEEcccCCCcc
Q 024659          175 ---------------ERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (264)
Q Consensus       175 ---------------~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~  205 (264)
                                     ..++|+|+++.||+++++..+.|+||+.+..
T Consensus       168 ~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          168 RELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             HHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence                           1489999999999998766677999998754

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.37  E-value=1.6e-12  Score=105.02  Aligned_cols=127  Identities=14%  Similarity=0.082  Sum_probs=94.9

Q ss_pred             CCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCC--ccccceeeEeCCcceEEEecCCCCCHHHh
Q 024659           66 GEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR--LANLLGCCCEGDERLLVAEYMPNDTLAKH  143 (264)
Q Consensus        66 g~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~~~~~~~~~~~~lv~e~~~~~sL~~~  143 (264)
                      +.|..+.||++...+|..+++|......   ...+.+|+++++.+.+.+  +.+++++...++..++||||++|.+|.  
T Consensus        29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~~---~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--  103 (264)
T 1nd4_A           29 IGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--  103 (264)
T ss_dssp             CTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred             cCCCCceEEEEecCCCCeEEEEeCCccc---chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence            4566799999987777789999987542   234678888888885444  556888877777789999999998874  


Q ss_pred             hhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCC------------------------------------------------
Q 024659          144 LFHWETQPMKWAMRLRVALHIAEALEYCTSKE------------------------------------------------  175 (264)
Q Consensus       144 l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~------------------------------------------------  175 (264)
                      ..  .   ..   ...++.+++..+..||+..                                                
T Consensus       104 ~~--~---~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  175 (264)
T 1nd4_A          104 SS--H---LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLK  175 (264)
T ss_dssp             TS--C---CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHH
T ss_pred             cC--c---CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHH
Confidence            21  1   11   1256677777777777641                                                


Q ss_pred             ---------CceeeccCCCCeeeCCCCCeEEcccCCCcc
Q 024659          176 ---------RALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (264)
Q Consensus       176 ---------~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~  205 (264)
                               .++|+|++|.||++++++.+.|+||+.+..
T Consensus       176 ~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          176 ARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             HTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             HhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence                     289999999999998776677999998764

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.32  E-value=1e-11  Score=105.30  Aligned_cols=146  Identities=15%  Similarity=0.147  Sum_probs=106.9

Q ss_pred             CccccccccCCCCCCCeEEEEEeCCCCEEEEEEeC--CCC-ChhHHHHHHHHHHHhcCCC--CCccccceeeEeC---Cc
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFN--RSA-WPDARQFLEEARAVGQLRN--RRLANLLGCCCEG---DE  127 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~---~~  127 (264)
                      +.....++.++.|.++.||+....++ .+++|+..  ... ......+.+|+.+++.+..  ..+.+++.++.+.   +.
T Consensus        37 ~~~~~~~~~l~~G~sn~~y~v~~~~~-~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~  115 (359)
T 3dxp_A           37 FAGPLSVEQFKGGQSNPTFKLVTPGQ-TYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGR  115 (359)
T ss_dssp             CCCCCEEEECCC-CCSCEEEEECSSC-EEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSS
T ss_pred             CCCCceEEEcCCcccceEEEEEECCc-eEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCC
Confidence            34444567789999999999987654 78888876  322 1223457789999999874  4577888887665   34


Q ss_pred             ceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC---------------------------------
Q 024659          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK---------------------------------  174 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~---------------------------------  174 (264)
                      .++||||++|.++.+..    ...++......++.+++..|..||+.                                 
T Consensus       116 ~~~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (359)
T 3dxp_A          116 AFYIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSET  191 (359)
T ss_dssp             CEEEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCC
T ss_pred             eEEEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCC
Confidence            78999999998775421    22467788889999999999999961                                 


Q ss_pred             ------------------------CCceeeccCCCCeeeCCCCC--eEEcccCCCccc
Q 024659          175 ------------------------ERALYHDLNAYRIVFDDDVN--PRLSCFGLMKNS  206 (264)
Q Consensus       175 ------------------------~~i~H~dl~~~Nil~~~~~~--~kl~dfg~~~~~  206 (264)
                                              ..++|+|+++.||+++.++.  +.|+||+.+...
T Consensus       192 ~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g  249 (359)
T 3dxp_A          192 ESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG  249 (359)
T ss_dssp             SCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred             cCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence                                    26899999999999997653  689999998753

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=99.18  E-value=7.9e-12  Score=103.58  Aligned_cols=181  Identities=13%  Similarity=0.100  Sum_probs=117.0

Q ss_pred             cccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC-CCC--ccccceeeEeCC---cceEEEecC
Q 024659           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRR--LANLLGCCCEGD---ERLLVAEYM  135 (264)
Q Consensus        62 l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~--i~~~~~~~~~~~---~~~lv~e~~  135 (264)
                      ++.++.|....||+..    ..+++|.....  .....+.+|+++++.+. +..  +.+++......+   ..++||+++
T Consensus        25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i   98 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI   98 (304)
T ss_dssp             CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred             eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence            4557889999998764    35888886532  33567889999998884 333  334443332222   358899999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-----------------------------------------  174 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~-----------------------------------------  174 (264)
                      +|.+|.+...    ..++..+...++.+++..+..||+.                                         
T Consensus        99 ~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  174 (304)
T 3sg8_A           99 KGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD  174 (304)
T ss_dssp             CCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred             CCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence            9988765332    1356666677777777777777741                                         


Q ss_pred             ----------------CCceeeccCCCCeeeCC--CCCeEEcccCCCcccCCCCcccccccc---cccccccC-----CC
Q 024659          175 ----------------ERALYHDLNAYRIVFDD--DVNPRLSCFGLMKNSRDGRSYSTNLAF---TPPEYLRT-----GR  228 (264)
Q Consensus       175 ----------------~~i~H~dl~~~Nil~~~--~~~~kl~dfg~~~~~~~~~~~~~~~~y---~aPE~~~~-----~~  228 (264)
                                      ..++|+|+++.||++++  ...+.|+||+.+...............   ..|+....     +.
T Consensus       175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~  254 (304)
T 3sg8_A          175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH  254 (304)
T ss_dssp             HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred             HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence                            14799999999999997  566889999998754433222111111   22222110     00


Q ss_pred             ---------CCCccceechHHHHHHHHhCCCCC
Q 024659          229 ---------VTPESVMYSFGTLLLDLLSGKHIP  252 (264)
Q Consensus       229 ---------~~~~~DiwslG~~l~el~~g~~~~  252 (264)
                               .....+.|+++.+++.+.+|..++
T Consensus       255 ~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          255 KDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence                     011257899999999999998765

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.74  E-value=5.8e-08  Score=78.64  Aligned_cols=128  Identities=15%  Similarity=0.043  Sum_probs=89.3

Q ss_pred             CeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC-CCCccccceeeEeCCcceEEEecCCCCCHHHhhhcCC
Q 024659           71 NVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE  148 (264)
Q Consensus        71 g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~  148 (264)
                      ..||+... .++..+++|+-..   .....+..|+..|+.+. +--+.+++.++.+++..++||++++|.++.+....  
T Consensus        39 ~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~--  113 (272)
T 4gkh_A           39 ATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEE--  113 (272)
T ss_dssp             CEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHH--
T ss_pred             CeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccC--
Confidence            36898874 4566788888653   23456778999888885 33367788888888889999999999887765421  


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhc---------------------------------------------------C---
Q 024659          149 TQPMKWAMRLRVALHIAEALEYCTS---------------------------------------------------K---  174 (264)
Q Consensus       149 ~~~~~~~~~~~i~~qi~~~l~~lh~---------------------------------------------------~---  174 (264)
                          .......+..+++..|..||.                                                   .   
T Consensus       114 ----~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  189 (272)
T 4gkh_A          114 ----YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPF  189 (272)
T ss_dssp             ----CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCC
T ss_pred             ----CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccc
Confidence                011222344444444444443                                                   0   


Q ss_pred             ---CCceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          175 ---ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       175 ---~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                         ..++|+|+++.||+++.++.+-|+||+.+....
T Consensus       190 ~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~gd  225 (272)
T 4gkh_A          190 SPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIAD  225 (272)
T ss_dssp             CCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEEE
T ss_pred             cCCcEEEcCCCCCCeEEEECCeEEEEEECcccccCC
Confidence               127899999999999988778899999886533

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.69  E-value=7.1e-08  Score=79.82  Aligned_cols=137  Identities=14%  Similarity=0.051  Sum_probs=88.6

Q ss_pred             cccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCC---CccccceeeE-eCCcceEEEecCCC
Q 024659           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNR---RLANLLGCCC-EGDERLLVAEYMPN  137 (264)
Q Consensus        62 l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~-~~~~~~lv~e~~~~  137 (264)
                      +..++.|....||+.    +..+++|....  ......+.+|+++|+.+.+.   .+.+++.++. ..+..+++|++++|
T Consensus        24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G   97 (306)
T 3tdw_A           24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG   97 (306)
T ss_dssp             EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred             eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence            445678888899988    34678887532  22345788999999999753   2455555553 23457899999999


Q ss_pred             CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 024659          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-------------------------------------------  174 (264)
Q Consensus       138 ~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~-------------------------------------------  174 (264)
                      .++......    .++......++.++...|..||+.                                           
T Consensus        98 ~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~  173 (306)
T 3tdw_A           98 QILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT  173 (306)
T ss_dssp             EECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred             eECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence            887653210    123333333344444433333321                                           


Q ss_pred             ----------------CCceeeccCCCCeeeCC---CCC-eEEcccCCCcccCC
Q 024659          175 ----------------ERALYHDLNAYRIVFDD---DVN-PRLSCFGLMKNSRD  208 (264)
Q Consensus       175 ----------------~~i~H~dl~~~Nil~~~---~~~-~kl~dfg~~~~~~~  208 (264)
                                      ..++|+|+++.||+++.   ++. ..|+||+.+.....
T Consensus       174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd~  227 (306)
T 3tdw_A          174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDP  227 (306)
T ss_dssp             HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEECG
T ss_pred             HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCCH
Confidence                            14699999999999987   455 58999998875443

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.55  E-value=5.7e-08  Score=81.98  Aligned_cols=81  Identities=5%  Similarity=-0.024  Sum_probs=53.5

Q ss_pred             ccccC-CCCCCCeEEEEEeC-------CCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCC---CCccccceeeEeC-
Q 024659           61 IVSEH-GEKAPNVVYKGKLE-------NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRN---RRLANLLGCCCEG-  125 (264)
Q Consensus        61 ~l~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h---~~i~~~~~~~~~~-  125 (264)
                      .++.| +.|..+.+|+....       ++..+++|......   ......+.+|+.+++.+..   -.+.+++.++.+. 
T Consensus        24 ~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~  103 (357)
T 3ats_A           24 VESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD  103 (357)
T ss_dssp             EEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred             EEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence            34566 78888999988754       25678888765432   1012346678888887742   2466677776544 


Q ss_pred             --CcceEEEecCCCCCHH
Q 024659          126 --DERLLVAEYMPNDTLA  141 (264)
Q Consensus       126 --~~~~lv~e~~~~~sL~  141 (264)
                        ...++|||+++|.++.
T Consensus       104 ~~g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A          104 VLGTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             TTSSCEEEEECCCCBCCC
T ss_pred             ccCCceEEEEecCCCChh
Confidence              2468999999887654

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.39  E-value=3.5e-06  Score=72.10  Aligned_cols=76  Identities=13%  Similarity=0.056  Sum_probs=49.4

Q ss_pred             ccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCC-------hhHHHHHHHHHHHhcCCC--CC-ccccceeeEeCCcce
Q 024659           61 IVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW-------PDARQFLEEARAVGQLRN--RR-LANLLGCCCEGDERL  129 (264)
Q Consensus        61 ~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~~-i~~~~~~~~~~~~~~  129 (264)
                      -++.+|.|..+.||++... +++.+++|.......       ....++..|.++++.+..  +. +.+++.+  +.+..+
T Consensus        34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~  111 (397)
T 2olc_A           34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAV  111 (397)
T ss_dssp             EEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTE
T ss_pred             EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccE
Confidence            4567899999999999753 467899998654221       123456778888887742  33 3344433  455678


Q ss_pred             EEEecCCCC
Q 024659          130 LVAEYMPND  138 (264)
Q Consensus       130 lv~e~~~~~  138 (264)
                      +|||++++.
T Consensus       112 lvmE~l~g~  120 (397)
T 2olc_A          112 TVMEDLSHL  120 (397)
T ss_dssp             EEECCCTTS
T ss_pred             EEEEeCCCc
Confidence            999999763

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.31  E-value=8.6e-06  Score=67.89  Aligned_cols=140  Identities=11%  Similarity=0.082  Sum_probs=77.7

Q ss_pred             cccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCC--CCccccce------eeEeCCcceEEEe
Q 024659           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN--RRLANLLG------CCCEGDERLLVAE  133 (264)
Q Consensus        62 l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~------~~~~~~~~~lv~e  133 (264)
                      +..++.|..+.||+....++ .+++|.....    ...+..|+.+++.+..  -.+.+++.      +....+..+++++
T Consensus        37 ~~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~  111 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD  111 (346)
T ss_dssp             EEECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred             eeeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence            44566677889999987666 5889998752    1233344555554421  12233332      1234566789999


Q ss_pred             cCCCCCHH-----------Hhhh----cCC----CC-------CCCHHH-------------------------------
Q 024659          134 YMPNDTLA-----------KHLF----HWE----TQ-------PMKWAM-------------------------------  156 (264)
Q Consensus       134 ~~~~~sL~-----------~~l~----~~~----~~-------~~~~~~-------------------------------  156 (264)
                      |++|.++.           ..+.    ...    ..       ...|..                               
T Consensus       112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  191 (346)
T 2q83_A          112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE  191 (346)
T ss_dssp             CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred             eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence            99986542           1110    000    00       012211                               


Q ss_pred             HHHHHHHHHHHHHHHhc------------CCCceeeccCCCCeeeCCCCCeEEcccCCCccc
Q 024659          157 RLRVALHIAEALEYCTS------------KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (264)
Q Consensus       157 ~~~i~~qi~~~l~~lh~------------~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~  206 (264)
                      ...+..++..++..|+.            ...++|+|+++.||+++.++.+.|+||+.+...
T Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~g  253 (346)
T 2q83_A          192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFD  253 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEEC
T ss_pred             HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcccC
Confidence            00111223334555542            238999999999999988889999999987643

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=98.25  E-value=3.4e-06  Score=68.93  Aligned_cols=76  Identities=21%  Similarity=0.262  Sum_probs=54.6

Q ss_pred             cccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCC---CccccceeeEeCCcceEEEecCC
Q 024659           60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNR---RLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        60 ~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      .-++++|.|..+.||+....+|+.+++|+...........+..|++.|+.|...   -+.+++++  .  ..++|||++.
T Consensus        18 ~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~--~~~lv~e~l~   93 (288)
T 3f7w_A           18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D--DRTLAMEWVD   93 (288)
T ss_dssp             EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E--TTEEEEECCC
T ss_pred             EEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--c--CceEEEEeec
Confidence            345677999999999999999999999987765444445577899988888432   23344433  2  3478999987


Q ss_pred             CCC
Q 024659          137 NDT  139 (264)
Q Consensus       137 ~~s  139 (264)
                      ++.
T Consensus        94 ~~~   96 (288)
T 3f7w_A           94 ERP   96 (288)
T ss_dssp             CCC
T ss_pred             ccC
Confidence            654

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.99  E-value=6.1e-05  Score=64.90  Aligned_cols=34  Identities=9%  Similarity=0.048  Sum_probs=28.7

Q ss_pred             hcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          172 TSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       172 h~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      +.. .++|+|+++.||+++.++ +.++||+.+....
T Consensus       230 ~~~-~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~  263 (420)
T 2pyw_A          230 RAQ-ALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGP  263 (420)
T ss_dssp             BCC-EEECSCCSGGGEEECSSC-EEECCCTTCEEEC
T ss_pred             CCC-eEEecCCCCCcEEEeCCC-CEEEeCcccccCc
Confidence            344 799999999999998776 9999999887544

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.86  E-value=3.5e-05  Score=63.24  Aligned_cols=71  Identities=14%  Similarity=0.159  Sum_probs=43.3

Q ss_pred             cccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCc-cccceeeEeCCcceEEEecC-CCCC
Q 024659           62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL-ANLLGCCCEGDERLLVAEYM-PNDT  139 (264)
Q Consensus        62 l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~-~~~s  139 (264)
                      ++.++.|..+.+|+.     ..+++|........ .....+|+.+++.+...++ .+++..  ..+.-+++++|+ ++.+
T Consensus        23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~   94 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT   94 (301)
T ss_dssp             CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred             eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence            566788999999998     35888887653211 1123457777777643333 344433  344457899999 6654


Q ss_pred             H
Q 024659          140 L  140 (264)
Q Consensus       140 L  140 (264)
                      +
T Consensus        95 l   95 (301)
T 3dxq_A           95 M   95 (301)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.85  E-value=9.4e-05  Score=61.15  Aligned_cols=160  Identities=13%  Similarity=0.120  Sum_probs=85.9

Q ss_pred             ccCHHHHHHHhCCCccc--cccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCC--cccc
Q 024659           43 EYSIETLRTATSGFAME--NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR--LANL  118 (264)
Q Consensus        43 ~~~~~~~~~~~~~~~~~--~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~  118 (264)
                      .++.+++...-..|...  .-++.++.|....+|+....++ .+++|......  ..+.+..|+.++..+...+  +.++
T Consensus         6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~   82 (322)
T 2ppq_A            6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLP   82 (322)
T ss_dssp             CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred             cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcc
Confidence            45666666665556542  2355677888889999987666 57888887631  1223445666666653222  2233


Q ss_pred             cee------eEeCCcceEEEecCCCCCHHH-----------hh---hc-CCC---C---CCC---HHHHHH---------
Q 024659          119 LGC------CCEGDERLLVAEYMPNDTLAK-----------HL---FH-WET---Q---PMK---WAMRLR---------  159 (264)
Q Consensus       119 ~~~------~~~~~~~~lv~e~~~~~sL~~-----------~l---~~-~~~---~---~~~---~~~~~~---------  159 (264)
                      +..      ....+..++++++++|..+..           .+   .. ...   .   ...   |.....         
T Consensus        83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~  162 (322)
T 2ppq_A           83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV  162 (322)
T ss_dssp             CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred             cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence            321      122345688999998864311           00   00 000   0   011   211000         


Q ss_pred             ---HHHHHHHHHHHHhc------CCCceeeccCCCCeeeCCCCCeEEcccCCCcc
Q 024659          160 ---VALHIAEALEYCTS------KERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (264)
Q Consensus       160 ---i~~qi~~~l~~lh~------~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~  205 (264)
                         +...+...+..+..      ..+++|+|+++.||+++.+..+.|+||+.+..
T Consensus       163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence               00112233334431      12689999999999999876668999998753

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.81  E-value=0.00055  Score=56.60  Aligned_cols=159  Identities=19%  Similarity=0.151  Sum_probs=87.3

Q ss_pred             ccCHHHHHHHhCCCcc--ccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCC--cccc
Q 024659           43 EYSIETLRTATSGFAM--ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR--LANL  118 (264)
Q Consensus        43 ~~~~~~~~~~~~~~~~--~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~--i~~~  118 (264)
                      ..+.+++...-..+..  ..-+..++ |....||+....+|+.+++|....... ....+..|..+++.+....  +.++
T Consensus        10 ~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~   87 (328)
T 1zyl_A           10 TLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAP   87 (328)
T ss_dssp             CCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCC
T ss_pred             CCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecce
Confidence            3445555444333322  11233456 777899998877777899999875422 2345667777777764222  3334


Q ss_pred             cee-----eEeCCcceEEEecCCCCCHH-----H------hhh-------cCC---CCCCCHHHH---------------
Q 024659          119 LGC-----CCEGDERLLVAEYMPNDTLA-----K------HLF-------HWE---TQPMKWAMR---------------  157 (264)
Q Consensus       119 ~~~-----~~~~~~~~lv~e~~~~~sL~-----~------~l~-------~~~---~~~~~~~~~---------------  157 (264)
                      +..     ....+..++++++++|.++.     .      .+.       ...   .....+...               
T Consensus        88 ~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  167 (328)
T 1zyl_A           88 VAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIP  167 (328)
T ss_dssp             CCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSC
T ss_pred             eecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCC
Confidence            332     12244567899999875431     1      110       000   011121110               


Q ss_pred             -------HHHHHHHHHHHHHH----hcCCCceeeccCCCCeeeCCCCCeEEcccCCCccc
Q 024659          158 -------LRVALHIAEALEYC----TSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (264)
Q Consensus       158 -------~~i~~qi~~~l~~l----h~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~  206 (264)
                             ...+.+++..+..+    ... .++|+|+++.||+++ + .+.++||+.+...
T Consensus       168 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g  224 (328)
T 1zyl_A          168 SGLKAAFLKATDELIAAVTAHWREDFTV-LRLHGDCHAGNILWR-D-GPMFVDLDDARNG  224 (328)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHCCSCSCC-EECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcCCe-eeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence                   11122222222222    122 689999999999999 4 8999999887644

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.79  E-value=0.00018  Score=59.47  Aligned_cols=76  Identities=17%  Similarity=0.071  Sum_probs=58.1

Q ss_pred             ccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC---CCCccccceeeEeCCcceEEEecCCC
Q 024659           61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR---NRRLANLLGCCCEGDERLLVAEYMPN  137 (264)
Q Consensus        61 ~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~  137 (264)
                      -++.++.|....+|+.... +..+++|.....   ....+..|++.|+.|.   ...+.+++.++...+..++|||++++
T Consensus        40 ~~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G  115 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK  115 (312)
T ss_dssp             EEEEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred             eeEEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence            3456799999999999864 457888887642   3456788988888884   35677888887777788999999988


Q ss_pred             CCH
Q 024659          138 DTL  140 (264)
Q Consensus       138 ~sL  140 (264)
                      ..+
T Consensus       116 ~~~  118 (312)
T 3jr1_A          116 SKN  118 (312)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            754

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.76  E-value=0.00016  Score=60.19  Aligned_cols=33  Identities=12%  Similarity=0.079  Sum_probs=28.0

Q ss_pred             CceeeccCCCCeeeCCC----CCeEEcccCCCcccCC
Q 024659          176 RALYHDLNAYRIVFDDD----VNPRLSCFGLMKNSRD  208 (264)
Q Consensus       176 ~i~H~dl~~~Nil~~~~----~~~kl~dfg~~~~~~~  208 (264)
                      .++|+|+.+.||+++.+    +.+.|+||+.+.....
T Consensus       184 ~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~~  220 (333)
T 3csv_A          184 VFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGHR  220 (333)
T ss_dssp             EEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEECT
T ss_pred             eeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCCC
Confidence            79999999999999874    6799999998875443

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=97.67  E-value=6.2e-05  Score=65.08  Aligned_cols=74  Identities=18%  Similarity=0.300  Sum_probs=49.0

Q ss_pred             ccccCCCCCCCeEEEEEeCC--------CCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCc-cccceeeEeCCcceEE
Q 024659           61 IVSEHGEKAPNVVYKGKLEN--------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL-ANLLGCCCEGDERLLV  131 (264)
Q Consensus        61 ~l~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv  131 (264)
                      -++.++.|....+|++...+        +..+++|+......  ...+..|+.+++.+...++ .++++.+.  +  .+|
T Consensus        77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v  150 (429)
T 1nw1_A           77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRL  150 (429)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEE
T ss_pred             EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEE
Confidence            34567888889999998653        46889998854221  1445578888888854444 45555432  2  489


Q ss_pred             EecCCCCCH
Q 024659          132 AEYMPNDTL  140 (264)
Q Consensus       132 ~e~~~~~sL  140 (264)
                      ++|++|.+|
T Consensus       151 ~e~l~G~~l  159 (429)
T 1nw1_A          151 EEYIPSRPL  159 (429)
T ss_dssp             ECCCCEEEC
T ss_pred             EEEeCCccc
Confidence            999986443

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=97.55  E-value=0.00016  Score=61.32  Aligned_cols=139  Identities=15%  Similarity=0.179  Sum_probs=81.7

Q ss_pred             cccCCCCCCCeEEEEEeC--------CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCc-cccceeeEeCCcceEEE
Q 024659           62 VSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL-ANLLGCCCEGDERLLVA  132 (264)
Q Consensus        62 l~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~  132 (264)
                      ++.+..|....+|+....        ++..+++|+.... ........+|.++++.+...++ .++++.+.  +  .+|+
T Consensus        55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--g~v~  129 (379)
T 3feg_A           55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFP--E--GRLE  129 (379)
T ss_dssp             CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T--EEEE
T ss_pred             EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C--ccEE
Confidence            456677888999999864        2468899886432 2234556789998888853333 45555443  2  4899


Q ss_pred             ecCCCCCHHHh--------------hh--cCC----CCCCC--HHHHHHHHHHHHH-------------------HHHH-
Q 024659          133 EYMPNDTLAKH--------------LF--HWE----TQPMK--WAMRLRVALHIAE-------------------ALEY-  170 (264)
Q Consensus       133 e~~~~~sL~~~--------------l~--~~~----~~~~~--~~~~~~i~~qi~~-------------------~l~~-  170 (264)
                      ||++|.+|...              +.  +..    .+...  +.++..+..++..                   .+.. 
T Consensus       130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L  209 (379)
T 3feg_A          130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL  209 (379)
T ss_dssp             ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred             EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence            99988654311              11  001    11222  4555555544422                   1222 


Q ss_pred             ---HhcC---CCceeeccCCCCeeeCCC----CCeEEcccCCCcc
Q 024659          171 ---CTSK---ERALYHDLNAYRIVFDDD----VNPRLSCFGLMKN  205 (264)
Q Consensus       171 ---lh~~---~~i~H~dl~~~Nil~~~~----~~~kl~dfg~~~~  205 (264)
                         |...   ..++|+|+.+.||+++.+    +.+.++||..+..
T Consensus       210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence               2211   258999999999999876    7899999998864

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=97.48  E-value=0.0002  Score=60.46  Aligned_cols=75  Identities=13%  Similarity=0.217  Sum_probs=44.0

Q ss_pred             ccccCCCCCCCeEEEEEeCC---------CCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCc-cccceeeEeCCcceE
Q 024659           61 IVSEHGEKAPNVVYKGKLEN---------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL-ANLLGCCCEGDERLL  130 (264)
Q Consensus        61 ~l~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~l  130 (264)
                      -+..++.|....+|+....+         +..+++|...... ........|.++++.+...++ .++++..  .  -++
T Consensus        37 ~~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~  111 (369)
T 3c5i_A           37 RVKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGR  111 (369)
T ss_dssp             EEEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEE
T ss_pred             EEEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cceecHHHHHHHHHHHHhcCCCCceEEec--C--CcE
Confidence            35567888889999998654         2578888875432 111123567777777753343 3555433  2  378


Q ss_pred             EEecCCCCCH
Q 024659          131 VAEYMPNDTL  140 (264)
Q Consensus       131 v~e~~~~~sL  140 (264)
                      |++|++|.++
T Consensus       112 v~e~i~G~~l  121 (369)
T 3c5i_A          112 IEEWLYGDPL  121 (369)
T ss_dssp             EEECCCSEEC
T ss_pred             EEEEecCCcC
Confidence            9999987543

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=97.37  E-value=0.0009  Score=58.23  Aligned_cols=74  Identities=14%  Similarity=0.083  Sum_probs=46.6

Q ss_pred             cccCCCCCCCeEEEEEeCC-CCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCc-cccceeeEeCCcceEEEecCCCCC
Q 024659           62 VSEHGEKAPNVVYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL-ANLLGCCCEGDERLLVAEYMPNDT  139 (264)
Q Consensus        62 l~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~~~s  139 (264)
                      ++.|+.|....+|+....+ +..+++|+....... .-...+|+.+++.+...++ .++++.+  .+  .+|++|++|.+
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~I~G~~  187 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFF--TN--GRIEEFMDGYA  187 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEECCCSEE
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEeeCCcc
Confidence            4467788889999998765 467888887543211 1112478888888865555 4555554  22  46999998754


Q ss_pred             H
Q 024659          140 L  140 (264)
Q Consensus       140 L  140 (264)
                      |
T Consensus       188 l  188 (458)
T 2qg7_A          188 L  188 (458)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=97.06  E-value=0.0036  Score=52.19  Aligned_cols=32  Identities=6%  Similarity=-0.029  Sum_probs=28.0

Q ss_pred             CceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       176 ~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      .++|+|+.+.||+++.++.+.++||+.+....
T Consensus       207 ~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~~  238 (339)
T 3i1a_A          207 VLCHSDIHAGNVLVGNEESIYIIDWDEPMLAP  238 (339)
T ss_dssp             EEECSCCCGGGEEECGGGCEEECCCSSCEEEC
T ss_pred             eeEeCCCCcCCEEEeCCCeEEEEECCCCeeCC
Confidence            68999999999999988889999998876543

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=96.96  E-value=0.0026  Score=54.67  Aligned_cols=75  Identities=15%  Similarity=0.142  Sum_probs=47.8

Q ss_pred             ccccCCCCCCCeEEEEEeCC--------CCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCc-cccceeeEeCCcceEE
Q 024659           61 IVSEHGEKAPNVVYKGKLEN--------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL-ANLLGCCCEGDERLLV  131 (264)
Q Consensus        61 ~l~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv  131 (264)
                      -++.+..|....+|+....+        +..+++|+..... ...-...+|.++++.+...++ .++++.+  .  -++|
T Consensus        74 ~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I  148 (424)
T 3mes_A           74 EVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRI  148 (424)
T ss_dssp             EEEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEE
T ss_pred             EEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEE
Confidence            35567778889999998753        5688898865432 222223467777777753333 3444422  2  3789


Q ss_pred             EecCCCCCH
Q 024659          132 AEYMPNDTL  140 (264)
Q Consensus       132 ~e~~~~~sL  140 (264)
                      ++|++|.+|
T Consensus       149 ~efI~G~~l  157 (424)
T 3mes_A          149 EEFIDGEPL  157 (424)
T ss_dssp             EECCCSEEC
T ss_pred             EEEeCCccC
Confidence            999998654

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=96.42  E-value=0.0068  Score=46.87  Aligned_cols=103  Identities=14%  Similarity=0.015  Sum_probs=67.8

Q ss_pred             CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCcccccc
Q 024659          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNL  216 (264)
Q Consensus       138 ~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~-~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  216 (264)
                      -||.++|.. .+.++++.+++.++.|.+.+|.-+-. + .-..+=+.|..|++..+|.+-+.+ ..+        .....
T Consensus        33 vSL~eIL~~-~~~PlsEEqaWALc~Qc~~~L~~~~~~~-~~~~~i~~~~~i~l~~dG~V~f~~-~~s--------~~~~~  101 (229)
T 2yle_A           33 LSLEEILRL-YNQPINEEQAWAVCYQCCGSLRAAARRR-QPRHRVRSAAQIRVWRDGAVTLAP-AAD--------DAGEP  101 (229)
T ss_dssp             EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT-CCCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred             ccHHHHHHH-cCCCcCHHHHHHHHHHHHHHHHhhhhcc-cCCceecCCcceEEecCCceeccc-ccc--------ccccc
Confidence            378998865 67899999999999999999977622 2 111223456888898888888774 111        11233


Q ss_pred             cccccccccCCCCCCccceechHHHHHHHHhCCCCC
Q 024659          217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP  252 (264)
Q Consensus       217 ~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~  252 (264)
                      .+.|||... ...+.+.-|||||+++|.-+--..+.
T Consensus       102 ~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e  136 (229)
T 2yle_A          102 PPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKE  136 (229)
T ss_dssp             -----CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             CCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCc
Confidence            566888763 33466788999999999988776554

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=95.82  E-value=0.015  Score=49.64  Aligned_cols=30  Identities=13%  Similarity=0.032  Sum_probs=25.6

Q ss_pred             CceeeccCCCCeee------CCCCCeEEcccCCCcc
Q 024659          176 RALYHDLNAYRIVF------DDDVNPRLSCFGLMKN  205 (264)
Q Consensus       176 ~i~H~dl~~~Nil~------~~~~~~kl~dfg~~~~  205 (264)
                      .++|+|+.+.||++      +++..+.++||..+..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            36799999999999      4567899999999874

>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}

Probab=91.18  E-value=0.59  Score=35.90  Aligned_cols=85  Identities=14%  Similarity=0.106  Sum_probs=59.1

Q ss_pred             CCCCccccceeeEeCCcceEEEecCC-CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeee
Q 024659          111 RNRRLANLLGCCCEGDERLLVAEYMP-NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF  189 (264)
Q Consensus       111 ~h~~i~~~~~~~~~~~~~~lv~e~~~-~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~  189 (264)
                      .||+++.. .+-.+.+.+.+.++.-+ .-++.. +     +..+...+++++.+|+....+++..   +|--++|+|+++
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i-----k~~~~~eKlr~l~ni~~l~~~~~~r---~tf~L~P~NL~f  112 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I-----KSFTKNEKLRYLLNIKNLEEVNRTR---YTFVLAPDELFF  112 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G-----GGSCHHHHHHHHHHGGGGGGGGGSS---EECCCSGGGEEE
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H-----HhcCHHHHHHHHHHHHHHHHHhcCc---eEEEEecceEEE
Confidence            57777766 45555555555555433 223333 2     2477888999999999877555443   677899999999


Q ss_pred             CCCCCeEEcccCCCcc
Q 024659          190 DDDVNPRLSCFGLMKN  205 (264)
Q Consensus       190 ~~~~~~kl~dfg~~~~  205 (264)
                      +.++.+++.-.|+...
T Consensus       113 ~~~~~p~i~~RGik~~  128 (215)
T 4ann_A          113 TRDGLPIAKTRGLQNV  128 (215)
T ss_dssp             CTTSCEEESCCEETTT
T ss_pred             cCCCCEEEEEccCccC
Confidence            9999999998886543

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=90.86  E-value=0.86  Score=35.12  Aligned_cols=84  Identities=17%  Similarity=0.220  Sum_probs=58.3

Q ss_pred             CCCCccccceeeEeCCcceEEEecCCC-CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHH-HHhcCCCceeeccCCCCee
Q 024659          111 RNRRLANLLGCCCEGDERLLVAEYMPN-DTLAKHLFHWETQPMKWAMRLRVALHIAEALE-YCTSKERALYHDLNAYRIV  188 (264)
Q Consensus       111 ~h~~i~~~~~~~~~~~~~~lv~e~~~~-~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~-~lh~~~~i~H~dl~~~Nil  188 (264)
                      .||++  -..+-.+.+.+.+.++.-++ -++.. ++     .++...+++++.+|+.... +++   .-+|--++|+|++
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~-i~-----~~~~~eKlrll~nl~~L~~~~~~---~r~tf~l~P~NL~  116 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAA-IR-----KTTLLSRIRAAIHLVSKVKHHSA---RRLIFIVCPENLM  116 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHHH-HH-----TSCHHHHHHHHHHHHHHHSSCCS---SSEECCCCGGGEE
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHH-HH-----hcCHHHHHHHHHHHHHHHHHhhh---CceeEEEeCceEE
Confidence            56777  33333455566666665433 34443 32     4778889999999988766 443   3477789999999


Q ss_pred             eCCCCCeEEcccCCCcc
Q 024659          189 FDDDVNPRLSCFGLMKN  205 (264)
Q Consensus       189 ~~~~~~~kl~dfg~~~~  205 (264)
                      ++.++.+++.-.|+-..
T Consensus       117 f~~~~~p~i~hRGi~~~  133 (219)
T 4ano_A          117 FNRALEPFFLHVGVKES  133 (219)
T ss_dssp             ECTTCCEEESCCEETTT
T ss_pred             EeCCCcEEEEEcCCccc
Confidence            99999999999887543

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=85.20  E-value=0.14  Score=44.46  Aligned_cols=62  Identities=5%  Similarity=0.004  Sum_probs=18.4

Q ss_pred             cccccCCCCCCCeEEEEEeCC-CCEEEE------EEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEe
Q 024659           60 NIVSEHGEKAPNVVYKGKLEN-QFRIAV------KRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCE  124 (264)
Q Consensus        60 ~~l~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~  124 (264)
                      .+.+++|   ||.||++.+.. ...||+      |..+...  .+....+.+|..+.+.++|+|+++.+++...
T Consensus       145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred             cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence            4556677   89999999654 357787      6655322  1223457788889999999999999887643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	264
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	5e-35
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	8e-35
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-34
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	8e-34
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	5e-32
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	6e-31
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-30
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-30
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-29
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-29
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	9e-29
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-28
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-28
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	6e-28
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-27
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-27
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-27
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	4e-27
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	5e-27
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-26
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	6e-26
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	9e-26
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-25
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	5e-25
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-24
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-24
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-24
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-23
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-23
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-23
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-23
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-23
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-23
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-23
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	5e-23
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	5e-22
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	8e-22
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-21
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-20
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	5e-20
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	8e-20
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-19
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-19
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-19
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-18
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	3e-18
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-17
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-16
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-16
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-15
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-12
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-11
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	2e-06

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (312), Expect = 5e-35
 Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 8/191 (4%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           VV  GK   Q+ +A+K     +  +  +F+EEA+ +  L + +L  L G C +     ++
Sbjct: 19  VVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 77

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM N  L  +L        +    L +   + EA+EY  SK + L+ DL A   + +D
Sbjct: 78  TEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARNCLVND 135

Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
               ++S FGL +   D    S+      + ++PPE L   + + +S +++FG L+ ++ 
Sbjct: 136 QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 195

Query: 247 SGKHIPPSHVS 257
           S   +P    +
Sbjct: 196 SLGKMPYERFT 206

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (314), Expect = 8e-35
 Identities = 34/183 (18%), Positives = 77/183 (42%), Gaps = 6/183 (3%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
           VV+K     +   +A K  +    P  R Q + E + + +  +  +    G      E  
Sbjct: 21  VVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 80

Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189
           +  E+M   +L + L   +   +   +  +V++ + + L Y   K + ++ D+    I+ 
Sbjct: 81  ICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 138

Query: 190 DDDVNPRLSCFGLMKNSRDGRSYST--NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
           +     +L  FG+     D  + S     ++  PE L+    + +S ++S G  L+++  
Sbjct: 139 NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198

Query: 248 GKH 250
           G++
Sbjct: 199 GRY 201

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (308), Expect = 2e-34
 Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 8/191 (4%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
           +V+ G   N+ ++A+K     A  +   F+EEA  + +L + +L  L G C E     LV
Sbjct: 20  LVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 78

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            E+M +  L+ +    +         L + L + E + Y       ++ DL A   +  +
Sbjct: 79  FEFMEHGCLSDY-LRTQRGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGE 136

Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
           +   ++S FG+ +   D +  S+      + +  PE     R + +S ++SFG L+ ++ 
Sbjct: 137 NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 196

Query: 247 SGKHIPPSHVS 257
           S   IP  + S
Sbjct: 197 SEGKIPYENRS 207

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (304), Expect = 8e-34
 Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 6/188 (3%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-L 130
            V  G      ++AVK     A   A+ FL EA  + QLR+  L  LLG   E    L +
Sbjct: 22  DVMLGDYRGN-KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 78

Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
           V EYM   +L  +L       +     L+ +L + EA+EY       ++ DL A  ++  
Sbjct: 79  VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVS 137

Query: 191 DDVNPRLSCFGLMKN-SRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK 249
           +D   ++S FGL K  S    +    + +T PE LR  + + +S ++SFG LL ++ S  
Sbjct: 138 EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 197

Query: 250 HIPPSHVS 257
            +P   + 
Sbjct: 198 RVPYPRIP 205

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (292), Expect = 5e-32
 Identities = 47/191 (24%), Positives = 88/191 (46%), Gaps = 8/191 (4%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
            V+ G      ++AVK   + +      FL EA  + QL+++RL  L     + +   ++
Sbjct: 28  EVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM N +L   L       +     L +A  IAE + +   +   ++ DL A  I+  D
Sbjct: 86  TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-IHRDLRAANILVSD 144

Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
            ++ +++ FGL +   D    +       + +T PE +  G  T +S ++SFG LL +++
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204

Query: 247 SGKHIPPSHVS 257
           +   IP   ++
Sbjct: 205 THGRIPYPGMT 215

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (286), Expect = 6e-31
 Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 8/191 (4%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
            V+ G      R+A+K            FL+EA+ + +LR+ +L  L     E +   +V
Sbjct: 32  EVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 89

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            EYM   +L   L     + ++    + +A  IA  + Y       ++ DL A  I+  +
Sbjct: 90  TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGE 148

Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
           ++  +++ FGL +   D    +       + +T PE    GR T +S ++SFG LL +L 
Sbjct: 149 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 208

Query: 247 SGKHIPPSHVS 257
           +   +P   + 
Sbjct: 209 TKGRVPYPGMV 219

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  113 bits (284), Expect = 1e-30
 Identities = 48/229 (20%), Positives = 91/229 (39%), Gaps = 22/229 (9%)

Query: 44  YSIETLRTATSGFAMENIVSEH------GEKAPNVVYKGKL----ENQFRIAVKRFNRSA 93
           ++ E    A   FA E  +S        G      V  G L    + +  +A+K      
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 94  WPDA-RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPM 152
                R FL EA  +GQ  +  + +L G   +    +++ E+M N +L            
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQF 125

Query: 153 KWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY 212
                + +   IA  ++Y       ++ DL A  I+ + ++  ++S FGL +   D  S 
Sbjct: 126 TVIQLVGMLRGIAAGMKYLADM-NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 184

Query: 213 STN---------LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
            T          + +T PE ++  + T  S ++S+G ++ +++S    P
Sbjct: 185 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 233

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (281), Expect = 2e-30
 Identities = 44/203 (21%), Positives = 80/203 (39%), Gaps = 11/203 (5%)

Query: 56  FAMEN--IVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDA---RQFLEEARAVGQ 109
           +A+E+  I    G+     VY  +  +++F +A+K   ++    A    Q   E      
Sbjct: 3   WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 62

Query: 110 LRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALE 169
           LR+  +  L G   +     L+ EY P  T+ + L                   +A AL 
Sbjct: 63  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALS 120

Query: 170 YCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--LAFTPPEYLRTG 227
           YC SK R ++ D+    ++       +++ FG   ++   R  +    L + PPE +   
Sbjct: 121 YCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 179

Query: 228 RVTPESVMYSFGTLLLDLLSGKH 250
               +  ++S G L  + L GK 
Sbjct: 180 MHDEKVDLWSLGVLCYEFLVGKP 202

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  110 bits (276), Expect = 2e-29
 Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 8/192 (4%)

Query: 72  VVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
            VY+G   +    +AVK        +  +FL+EA  + ++++  L  LLG C       +
Sbjct: 32  EVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 90

Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
           + E+M    L  +L     Q +   + L +A  I+ A+EY   K   ++ DL A   +  
Sbjct: 91  ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVG 149

Query: 191 DDVNPRLSCFGLMKNSRDGRSYST-----NLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
           ++   +++ FGL +        +       + +T PE L   + + +S +++FG LL ++
Sbjct: 150 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 209

Query: 246 LSGKHIPPSHVS 257
            +    P   + 
Sbjct: 210 ATYGMSPYPGID 221

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (275), Expect = 2e-29
 Identities = 39/188 (20%), Positives = 80/188 (42%), Gaps = 12/188 (6%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
            VYKGK      + +           + F  E   + + R+  +   +G      +  +V
Sbjct: 23  TVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YSTAPQLAIV 81

Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
            ++    +L  HL   ET   +    + +A   A+ ++Y  +K   ++ DL +  I   +
Sbjct: 82  TQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAK-SIIHRDLKSNNIFLHE 139

Query: 192 DVNPRLSCFGL--MKNSRDGRSYSTNLAFTP----PEYLRT---GRVTPESVMYSFGTLL 242
           D+  ++  FGL  +K+   G      L+ +     PE +R       + +S +Y+FG +L
Sbjct: 140 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199

Query: 243 LDLLSGKH 250
            +L++G+ 
Sbjct: 200 YELMTGQL 207

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  108 bits (272), Expect = 9e-29
 Identities = 36/190 (18%), Positives = 68/190 (35%), Gaps = 10/190 (5%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
            VY  + + N   +A+K+ + S        +  ++E R + +LR+       GC      
Sbjct: 30  AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT 89

Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
             LV EY           H   +P++      V     + L Y  S    ++ D+ A  I
Sbjct: 90  AWLVMEYCLGSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNI 146

Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLD 244
           +  +    +L  FG         S+     +  PE +     G+   +  ++S G   ++
Sbjct: 147 LLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 206

Query: 245 LLSGKHIPPS 254
           L   K    +
Sbjct: 207 LAERKPPLFN 216

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (268), Expect = 4e-28
 Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 16/205 (7%)

Query: 72  VVYKGKLEN----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
            VY G L +    +   AVK  NR     +  QFL E   +    +  + +LLG C   +
Sbjct: 42  CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE 101

Query: 127 ER-LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
              L+V  YM +  L ++    ET        +   L +A+ +++  SK + ++ DL A 
Sbjct: 102 GSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAAR 159

Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYS 237
             + D+    +++ FGL ++  D    S +        + +   E L+T + T +S ++S
Sbjct: 160 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 219

Query: 238 FGTLLLDLLSGKHIPPSHVSSFLWL 262
           FG LL +L++    P   V++F   
Sbjct: 220 FGVLLWELMTRGAPPYPDVNTFDIT 244

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (265), Expect = 4e-28
 Identities = 38/194 (19%), Positives = 69/194 (35%), Gaps = 15/194 (7%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
              K +   +   +  K  +  +  +A  +  + E   + +L++  +        +    
Sbjct: 19  RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNT 78

Query: 129 LL--VAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYH---- 180
            L  V EY     LA  +     E Q +     LRV   +  AL+ C  +    +     
Sbjct: 79  TLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHR 138

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMY 236
           DL    +  D   N +L  FGL +      S++     TP    PE +       +S ++
Sbjct: 139 DLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIW 198

Query: 237 SFGTLLLDLLSGKH 250
           S G LL +L +   
Sbjct: 199 SLGCLLYELCALMP 212

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (265), Expect = 6e-28
 Identities = 34/200 (17%), Positives = 74/200 (37%), Gaps = 12/200 (6%)

Query: 61  IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
           I+ E G+ A   VYK +  E     A K  +  +  +   ++ E   +    +  +  LL
Sbjct: 16  IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 75

Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
                 +   ++ E+     +   +   E +P+  +    V     +AL Y     + ++
Sbjct: 76  DAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDN-KIIH 133

Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST----NLAFTPPEYLRT-----GRVT 230
            DL A  I+F  D + +L+ FG+   +               +  PE +           
Sbjct: 134 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 193

Query: 231 PESVMYSFGTLLLDLLSGKH 250
            ++ ++S G  L+++   + 
Sbjct: 194 YKADVWSLGITLIEMAEIEP 213

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (264), Expect = 1e-27
 Identities = 37/184 (20%), Positives = 75/184 (40%), Gaps = 9/184 (4%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
            VY    +     +A+++ N    P     + E   + + +N  + N L     GDE  +
Sbjct: 35  TVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 94

Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
           V EY+   +L   +       M       V     +ALE+  S  + ++ D+ +  I+  
Sbjct: 95  VMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLG 150

Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLL 246
            D + +L+ FG        +S  + +  TP    PE +      P+  ++S G + ++++
Sbjct: 151 MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210

Query: 247 SGKH 250
            G+ 
Sbjct: 211 EGEP 214

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (259), Expect = 3e-27
 Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 16/193 (8%)

Query: 72  VVYKGKLENQ---FRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGD 126
            V KG  + +     +AVK     A   A   + L EA  + QL N  +  ++G C E +
Sbjct: 22  TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAE 80

Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
             +LV E      L K+L   + + +K    + +   ++  ++Y       ++ DL A  
Sbjct: 81  SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARN 137

Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFG 239
           ++       ++S FGL K  R   +Y          + +  PE +   + + +S ++SFG
Sbjct: 138 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG 197

Query: 240 TLLLDLLSGKHIP 252
            L+ +  S    P
Sbjct: 198 VLMWEAFSYGQKP 210

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  105 bits (263), Expect = 3e-27
 Identities = 39/185 (21%), Positives = 65/185 (35%), Gaps = 8/185 (4%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
           VV++          A K        D     +E + +  LR+  L NL     + +E ++
Sbjct: 41  VVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM 100

Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
           + E+M    L + +   E   M     +     + + L +       ++ DL    I+F 
Sbjct: 101 IYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIMFT 158

Query: 191 DDVNPR--LSCFGLMKNSRDGRSYST---NLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
              +    L  FGL  +    +S         F  PE      V   + M+S G L   L
Sbjct: 159 TKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL 218

Query: 246 LSGKH 250
           LSG  
Sbjct: 219 LSGLS 223

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (259), Expect = 4e-27
 Identities = 42/192 (21%), Positives = 80/192 (41%), Gaps = 14/192 (7%)

Query: 72  VVYKGKL---ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
            V +G     + Q  +A+K   +     D  + + EA+ + QL N  +  L+G C + + 
Sbjct: 24  SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEA 82

Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
            +LV E      L K L     + +  +    +   ++  ++Y   K   ++ DL A  +
Sbjct: 83  LMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNV 140

Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFGT 240
           +  +    ++S FGL K      SY T        L +  PE +   + +  S ++S+G 
Sbjct: 141 LLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGV 200

Query: 241 LLLDLLSGKHIP 252
            + + LS    P
Sbjct: 201 TMWEALSYGQKP 212

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (259), Expect = 5e-27
 Identities = 47/207 (22%), Positives = 89/207 (42%), Gaps = 22/207 (10%)

Query: 72  VVYKGKL------ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCE 124
           +VY+G        E + R+A+K  N +A    R +FL EA  + +     +  LLG   +
Sbjct: 35  MVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 94

Query: 125 GDERLLVAEYMPNDTLAKHLFHW--------ETQPMKWAMRLRVALHIAEALEYCTSKER 176
           G   L++ E M    L  +L              P   +  +++A  IA+ + Y  +  +
Sbjct: 95  GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-K 153

Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVT 230
            ++ DL A   +  +D   ++  FG+ ++  +   Y         + +  PE L+ G  T
Sbjct: 154 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 213

Query: 231 PESVMYSFGTLLLDLLSGKHIPPSHVS 257
             S ++SFG +L ++ +    P   +S
Sbjct: 214 TYSDVWSFGVVLWEIATLAEQPYQGLS 240

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (257), Expect = 1e-26
 Identities = 44/213 (20%), Positives = 81/213 (38%), Gaps = 23/213 (10%)

Query: 72  VVYKGKLEN---QFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRR-LANLLGCCCEGD 126
            V K +++    +   A+KR    A  D  R F  E   + +L +   + NLLG C    
Sbjct: 25  QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 84

Query: 127 ERLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCT 172
              L  EY P+  L   L               +     +     L  A  +A  ++Y +
Sbjct: 85  YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 144

Query: 173 SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN---LAFTPPEYLRTGRV 229
            K + ++ DL A  I+  ++   +++ FGL +        +     + +   E L     
Sbjct: 145 QK-QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVY 203

Query: 230 TPESVMYSFGTLLLDLLSGKHIPPSHVSSFLWL 262
           T  S ++S+G LL +++S    P   ++     
Sbjct: 204 TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY 236

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  101 bits (252), Expect = 6e-26
 Identities = 45/216 (20%), Positives = 84/216 (38%), Gaps = 36/216 (16%)

Query: 72  VVYKGKLENQFR------IAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCE 124
            V++ +            +AVK     A  D +  F  EA  + +  N  +  LLG C  
Sbjct: 28  RVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 87

Query: 125 GDERLLVAEYMPNDTLAKHLFHW----------------------ETQPMKWAMRLRVAL 162
           G    L+ EYM    L + L                            P+  A +L +A 
Sbjct: 88  GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIAR 147

Query: 163 HIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------L 216
            +A  + Y + + + ++ DL     +  +++  +++ FGL +N      Y  +      +
Sbjct: 148 QVAAGMAYLSER-KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPI 206

Query: 217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
            + PPE +   R T ES ++++G +L ++ S    P
Sbjct: 207 RWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 242

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 9e-26
 Identities = 36/193 (18%), Positives = 63/193 (32%), Gaps = 12/193 (6%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERL 129
            V        +  +AVK  +     D  +   +E      L +  +    G   EG+ + 
Sbjct: 20  EVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 79

Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189
           L  EY     L   +       M      R    +   + Y        + D+    ++ 
Sbjct: 80  LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLL 136

Query: 190 DDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESV-MYSFGTLL 242
           D+  N ++S FGL    R              L +  PE L+      E V ++S G +L
Sbjct: 137 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 196

Query: 243 LDLLSGKHIPPSH 255
             +L+G+      
Sbjct: 197 TAMLAGELPWDQP 209

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  100 bits (250), Expect = 2e-25
 Identities = 36/185 (19%), Positives = 61/185 (32%), Gaps = 8/185 (4%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
           VV++            K  N     D      E   + QL + +L NL     +  E +L
Sbjct: 44  VVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 103

Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
           + E++    L   +   E   M  A  +       E L++       ++ D+    I+ +
Sbjct: 104 ILEFLSGGELFDRI-AAEDYKMSEAEVINYMRQACEGLKHMHEH-SIVHLDIKPENIMCE 161

Query: 191 DDVNPR--LSCFGLMKNSRDGRS---YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
                   +  FGL             +    F  PE +    V   + M++ G L   L
Sbjct: 162 TKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVL 221

Query: 246 LSGKH 250
           LSG  
Sbjct: 222 LSGLS 226

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.1 bits (246), Expect = 5e-25
 Identities = 39/198 (19%), Positives = 81/198 (40%), Gaps = 15/198 (7%)

Query: 72  VVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLLGCCCEG 125
            VYKG       + +  +A+K    +  P A ++ L+EA  +  + N  +  LLG C   
Sbjct: 24  TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS 83

Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
             +L+  + MP   L  +        +     L   + IA+ + Y   + R ++ DL A 
Sbjct: 84  TVQLIT-QLMPFGCLLDY-VREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAAR 140

Query: 186 RIVFDDDVNPRLSCFGLMK--NSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFG 239
            ++     + +++ FGL K   + +   ++            E +     T +S ++S+G
Sbjct: 141 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 200

Query: 240 TLLLDLLSGKHIPPSHVS 257
             + +L++    P   + 
Sbjct: 201 VTVWELMTFGSKPYDGIP 218

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.0 bits (241), Expect = 1e-24
 Identities = 36/190 (18%), Positives = 70/190 (36%), Gaps = 14/190 (7%)

Query: 72  VVYKGKL-ENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
            VYKG   E    +A           +  ++F EEA  +  L++  +           + 
Sbjct: 24  TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKG 83

Query: 129 ----LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLN 183
               +LV E M + TL  +L     + MK  +       I + L++  ++   + H DL 
Sbjct: 84  KKCIVLVTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLK 141

Query: 184 AYRIVFDD-DVNPRLSCFGLMKNSRDGRSYST--NLAFTPPEYLRTGRVTPESVMYSFGT 240
              I       + ++   GL    R   + +      F  PE     +      +Y+FG 
Sbjct: 142 CDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGM 200

Query: 241 LLLDLLSGKH 250
            +L++ + ++
Sbjct: 201 CMLEMATSEY 210

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.2 bits (241), Expect = 2e-24
 Identities = 44/221 (19%), Positives = 79/221 (35%), Gaps = 31/221 (14%)

Query: 72  VVYKGKLENQFR------IAVKRFNRSAWPDARQ-FLEEARAVGQLRN-RRLANLLGCCC 123
            V +       +      +AVK    SA    R+  + E + +  L N   + NLLG C 
Sbjct: 38  KVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT 97

Query: 124 EGDERLLVAEYMPNDTLAKHLFHW----------------ETQPMKWAMRLRVALHIAEA 167
            G   L++ EY     L   L                   +   +     L  +  +A+ 
Sbjct: 98  IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKG 157

Query: 168 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPP 221
           + +  SK   ++ DL A  I+       ++  FGL ++ ++  +Y         + +  P
Sbjct: 158 MAFLASK-NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP 216

Query: 222 EYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVSSFLWL 262
           E +     T ES ++S+G  L +L S    P   +      
Sbjct: 217 ESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF 257

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.2 bits (241), Expect = 2e-24
 Identities = 44/216 (20%), Positives = 78/216 (36%), Gaps = 36/216 (16%)

Query: 72  VVYKG------KLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRN-RRLANLLGCCC 123
            V         K     ++AVK     A    R+  + E + + QL +   + NLLG C 
Sbjct: 52  KVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT 111

Query: 124 EGDERLLVAEYMPNDTLAKHLF---------------------HWETQPMKWAMRLRVAL 162
                 L+ EY     L  +L                        +   + +   L  A 
Sbjct: 112 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAY 171

Query: 163 HIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------L 216
            +A+ +E+   K   ++ DL A  ++       ++  FGL ++     +Y         +
Sbjct: 172 QVAKGMEFLEFK-SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPV 230

Query: 217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
            +  PE L  G  T +S ++S+G LL ++ S    P
Sbjct: 231 KWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 266

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 95.1 bits (236), Expect = 1e-23
 Identities = 33/186 (17%), Positives = 58/186 (31%), Gaps = 9/186 (4%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERL 129
            V   +    Q  +A+K   + A          E   + ++++  +  L      G    
Sbjct: 24  EVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLY 83

Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA--LYHDLNAYRI 187
           L+ + +    L   +   E          R+   + +A++Y              N    
Sbjct: 84  LIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYY 141

Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYST---NLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
             D+D    +S FGL K    G   ST      +  PE L     +     +S G +   
Sbjct: 142 SLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 201

Query: 245 LLSGKH 250
           LL G  
Sbjct: 202 LLCGYP 207

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.9 bits (235), Expect = 1e-23
 Identities = 35/211 (16%), Positives = 71/211 (33%), Gaps = 34/211 (16%)

Query: 72  VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEA--RAVGQLRNRRLANLLGCCCEGD--- 126
            V++GK   +  +AVK F+     + R +  EA       LR+  +   +    + +   
Sbjct: 18  EVWRGKWRGE-EVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 73

Query: 127 -ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC-------TSKERAL 178
            +  LV++Y  + +L  +L       +     +++AL  A  L +          K    
Sbjct: 74  TQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 130

Query: 179 YHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY----STNLAFTP----PEYLRT---- 226
           + DL +  I+   +    ++  GL                +   T     PE L      
Sbjct: 131 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM 190

Query: 227 --GRVTPESVMYSFGTLLLDLLSGKHIPPSH 255
                   + +Y+ G +  ++     I   H
Sbjct: 191 KHFESFKRADIYAMGLVFWEIARRCSIGGIH 221

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 93.7 bits (232), Expect = 3e-23
 Identities = 38/194 (19%), Positives = 68/194 (35%), Gaps = 18/194 (9%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDA---RQFLEEARAVGQLRNRRLANLLGCCCE--- 124
            V+  + L     +AVK        D     +F  EA+    L +  +  +         
Sbjct: 22  EVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP 81

Query: 125 -GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN 183
            G    +V EY+   TL   +      PM     + V     +AL +       ++ D+ 
Sbjct: 82  AGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQN-GIIHRDVK 138

Query: 184 AYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNL-------AFTPPEYLRTGRVTPESVMY 236
              I+       ++  FG+ +   D  +  T          +  PE  R   V   S +Y
Sbjct: 139 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 198

Query: 237 SFGTLLLDLLSGKH 250
           S G +L ++L+G+ 
Sbjct: 199 SLGCVLYEVLTGEP 212

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.7 bits (232), Expect = 3e-23
 Identities = 42/195 (21%), Positives = 70/195 (35%), Gaps = 17/195 (8%)

Query: 72  VVYKGKLE----NQFRIAVKRFNRSAWPDA---RQFLEEARAVGQLRNRRLANLLGCCCE 124
           VV +G+ +        +AVK               F+ E  A+  L +R L  L G    
Sbjct: 23  VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT 82

Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
              + +V E  P  +L                  R A+ +AE + Y  SK   ++ DL A
Sbjct: 83  PPMK-MVTELAPLGSLLDR-LRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF-IHRDLAA 139

Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYS 237
             ++       ++  FGLM+       +           A+  PE L+T   +  S  + 
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199

Query: 238 FGTLLLDLLSGKHIP 252
           FG  L ++ +    P
Sbjct: 200 FGVTLWEMFTYGQEP 214

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.3 bits (234), Expect = 3e-23
 Identities = 32/196 (16%), Positives = 75/196 (38%), Gaps = 9/196 (4%)

Query: 61  IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
           I  + G     +V++     ++     K        D     +E   +   R+R + +L 
Sbjct: 9   IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLH 67

Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
                 +E +++ E++    + + + +     +     +     + EAL++  S     +
Sbjct: 68  ESFESMEELVMIFEFISGLDIFERI-NTSAFELNEREIVSYVHQVCEALQFLHSHNIG-H 125

Query: 180 HDLNAYRIVFDDDVNPR--LSCFGLMKNSRDGRSYSTN---LAFTPPEYLRTGRVTPESV 234
            D+    I++    +    +  FG  +  + G ++        +  PE  +   V+  + 
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATD 185

Query: 235 MYSFGTLLLDLLSGKH 250
           M+S GTL+  LLSG +
Sbjct: 186 MWSLGTLVYVLLSGIN 201

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.4 bits (231), Expect = 3e-23
 Identities = 44/217 (20%), Positives = 87/217 (40%), Gaps = 18/217 (8%)

Query: 54  SGFAMENIVSEHGEKAPNVVYKGKLEN-----QFRIAVKRFNRSAWPDAR-QFLEEARAV 107
           S    + ++   G      VYKG L+      +  +A+K          R  FL EA  +
Sbjct: 7   SCVTRQKVI---GAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIM 63

Query: 108 GQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEA 167
           GQ  +  +  L G   +    +++ EYM N          +         + +   IA  
Sbjct: 64  GQFSHHNIIRLEGVISKYKPMMIITEYMENGA-LDKFLREKDGEFSVLQLVGMLRGIAAG 122

Query: 168 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-------LAFTP 220
           ++Y  +    ++ DL A  I+ + ++  ++S FGL +   D    +         + +T 
Sbjct: 123 MKYLANM-NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA 181

Query: 221 PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS 257
           PE +   + T  S ++SFG ++ ++++    P   +S
Sbjct: 182 PEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS 218

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.3 bits (231), Expect = 3e-23
 Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 13/196 (6%)

Query: 72  VVYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
            V++G           +A+K          R+ FL+EA  + Q  +  +  L+G   E +
Sbjct: 22  DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-N 80

Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
              ++ E      L +         +  A  +  A  ++ AL Y  SK R ++ D+ A  
Sbjct: 81  PVWIIMELCTLGEL-RSFLQVRKYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARN 138

Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEY-----LRTGRVTPESVMYSFGTL 241
           ++   +   +L  FGL +   D   Y  +    P ++     +   R T  S ++ FG  
Sbjct: 139 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 198

Query: 242 LLDLLSGKHIPPSHVS 257
           + ++L     P   V 
Sbjct: 199 MWEILMHGVKPFQGVK 214

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.2 bits (231), Expect = 5e-23
 Identities = 32/189 (16%), Positives = 62/189 (32%), Gaps = 13/189 (6%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDA---RQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
            V   + L      A+K   +              E   + +L +     L     + ++
Sbjct: 23  TVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEK 82

Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
                 Y  N  L K++                   I  ALEY   K   ++ DL    I
Sbjct: 83  LYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENI 139

Query: 188 VFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTL 241
           + ++D++ +++ FG  K            S+     +  PE L        S +++ G +
Sbjct: 140 LLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCI 199

Query: 242 LLDLLSGKH 250
           +  L++G  
Sbjct: 200 IYQLVAGLP 208

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 90.9 bits (225), Expect = 5e-22
 Identities = 37/202 (18%), Positives = 80/202 (39%), Gaps = 10/202 (4%)

Query: 56  FAMEN--IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQ---FLEEARAVGQ 109
           +++++  I+   G  +   V+  +   N    A+K   +      +Q     +E   +  
Sbjct: 1   YSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI 60

Query: 110 LRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALE 169
           + +  +  + G   +  +  ++ +Y+    L       ++Q     +    A  +  ALE
Sbjct: 61  VTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL--FSLLRKSQRFPNPVAKFYAAEVCLALE 118

Query: 170 YCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-GRSYSTNLAFTPPEYLRTGR 228
           Y  SK   +Y DL    I+ D + + +++ FG  K   D   +      +  PE + T  
Sbjct: 119 YLHSK-DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKP 177

Query: 229 VTPESVMYSFGTLLLDLLSGKH 250
                  +SFG L+ ++L+G  
Sbjct: 178 YNKSIDWWSFGILIYEMLAGYT 199

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 90.9 bits (225), Expect = 8e-22
 Identities = 36/194 (18%), Positives = 64/194 (32%), Gaps = 13/194 (6%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPD------ARQFLEEARAVGQLRNRRLANLLGCCCE 124
            VY  +  +     A+K  ++           A         V       +  +      
Sbjct: 19  EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT 78

Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
            D+   + + M    L  HL          A     A  I   LE+  ++   +Y DL  
Sbjct: 79  PDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNR-FVVYRDLKP 135

Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--LAFTPPEYLRTGR-VTPESVMYSFGTL 241
             I+ D+  + R+S  GL  +    + +++     +  PE L+ G      +  +S G +
Sbjct: 136 ANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCM 195

Query: 242 LLDLLSGKHIPPSH 255
           L  LL G      H
Sbjct: 196 LFKLLRGHSPFRQH 209

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.6 bits (219), Expect = 3e-21
 Identities = 38/192 (19%), Positives = 69/192 (35%), Gaps = 12/192 (6%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVG-QLRNRRLANLLGCCCEGD 126
            V+  +  +     A+K   +       D    + E R +     +  L ++       +
Sbjct: 17  KVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE 76

Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
               V EY+    L  H+          +     A  I   L++  SK   +Y DL    
Sbjct: 77  NLFFVMEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSK-GIVYRDLKLDN 133

Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFT----PPEYLRTGRVTPESVMYSFGTLL 242
           I+ D D + +++ FG+ K +  G + +     T     PE L   +       +SFG LL
Sbjct: 134 ILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLL 193

Query: 243 LDLLSGKHIPPS 254
            ++L G+     
Sbjct: 194 YEMLIGQSPFHG 205

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.4 bits (213), Expect = 2e-20
 Identities = 36/198 (18%), Positives = 65/198 (32%), Gaps = 17/198 (8%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQ------FLEEARAVGQLRNRRLANLLGCCCE 124
           VV K +      + A K   +     +R+         E   + ++++  +  L      
Sbjct: 25  VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 84

Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
             + +L+ E +    L       E + +           I   + Y  S + A + DL  
Sbjct: 85  KTDVILILELVAGGELFDF--LAEKESLTEEEATEFLKQILNGVYYLHSLQIA-HFDLKP 141

Query: 185 YRIVFDDDVNPR----LSCFGLMKNSRDGRSYSTNL---AFTPPEYLRTGRVTPESVMYS 237
             I+  D   P+    +  FGL      G  +        F  PE +    +  E+ M+S
Sbjct: 142 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 201

Query: 238 FGTLLLDLLSGKHIPPSH 255
            G +   LLSG       
Sbjct: 202 IGVITYILLSGASPFLGD 219

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.3 bits (210), Expect = 5e-20
 Identities = 37/195 (18%), Positives = 67/195 (34%), Gaps = 14/195 (7%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDA-----RQFLEEARAVGQLRNRRLANLLGCCCEG 125
            VYK +       +A+K+       +A     R  L E + + +L +  +  LL      
Sbjct: 13  TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK 72

Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
               LV ++M  D     +    +  +  +      L   + LEY        + DL   
Sbjct: 73  SNISLVFDFMETDLE--VIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL-HRDLKPN 129

Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFT-----PPEYLRTGRVTPESVMYSFGT 240
            ++ D++   +L+ FGL K+        T+   T     P              M++ G 
Sbjct: 130 NLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGC 189

Query: 241 LLLDLLSGKHIPPSH 255
           +L +LL      P  
Sbjct: 190 ILAELLLRVPFLPGD 204

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 84.4 bits (208), Expect = 8e-20
 Identities = 35/199 (17%), Positives = 63/199 (31%), Gaps = 23/199 (11%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDA---------RQFLEEARAVGQLRN-RRLANLLG 120
           VV +          AVK  + +                 L+E   + ++     +  L  
Sbjct: 18  VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKD 77

Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
                    LV + M    L  +L   E   +      ++   + E +         ++ 
Sbjct: 78  TYETNTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRKIMRALLEVICALHKL-NIVHR 134

Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST---NLAFTPPEYLRTGRV------TP 231
           DL    I+ DDD+N +L+ FG       G          ++  PE +             
Sbjct: 135 DLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGK 194

Query: 232 ESVMYSFGTLLLDLLSGKH 250
           E  M+S G ++  LL+G  
Sbjct: 195 EVDMWSTGVIMYTLLAGSP 213

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.8 bits (206), Expect = 1e-19
 Identities = 40/206 (19%), Positives = 80/206 (38%), Gaps = 12/206 (5%)

Query: 58  MEN--IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRN 112
           MEN   V + GE    VVYK +       +A+K+       +      + E   + +L +
Sbjct: 1   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60

Query: 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT 172
             +  LL      ++  LV E++  D L K +       +   +       + + L +C 
Sbjct: 61  PNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119

Query: 173 SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFT-----PPEYLRTG 227
           S  R L+ DL    ++ + +   +L+ FGL +         T+   T     P   L   
Sbjct: 120 SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178

Query: 228 RVTPESVMYSFGTLLLDLLSGKHIPP 253
             +    ++S G +  ++++ + + P
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFP 204

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 83.4 bits (205), Expect = 2e-19
 Identities = 34/207 (16%), Positives = 76/207 (36%), Gaps = 12/207 (5%)

Query: 58  MEN--IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNR 113
           ME    + + GE    VVYK +       A+K+       +      + E   + +L++ 
Sbjct: 1   MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60

Query: 114 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS 173
            +  L          +LV E++  D     L       ++        L +   + YC  
Sbjct: 61  NIVKLYDVIHTKKRLVLVFEHLDQDLK--KLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118

Query: 174 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP-----PEYLRTGR 228
           + R L+ DL    ++ + +   +++ FGL +         T+   T         + + +
Sbjct: 119 R-RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKK 177

Query: 229 VTPESVMYSFGTLLLDLLSGKHIPPSH 255
            +    ++S G +  ++++G  + P  
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGV 204

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.1 bits (207), Expect = 2e-19
 Identities = 30/190 (15%), Positives = 73/190 (38%), Gaps = 12/190 (6%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
           +V       N+ R+A+K+ +        ++ L E + + + R+  +  +           
Sbjct: 23  MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 82

Query: 130 LVAEYMPNDTLAKHLFHW-ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIV 188
           +   Y+    +   L+   +TQ +           I   L+Y  S    L+ DL    ++
Sbjct: 83  MKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLL 141

Query: 189 FDDDVNPRLSCFGLMKNSRDGRSYST-------NLAFTPPEYLRTGRVTPESV-MYSFGT 240
            +   + ++  FGL + +     ++           +  PE +   +   +S+ ++S G 
Sbjct: 142 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 201

Query: 241 LLLDLLSGKH 250
           +L ++LS + 
Sbjct: 202 ILAEMLSNRP 211

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 79.9 bits (196), Expect = 3e-18
 Identities = 36/219 (16%), Positives = 69/219 (31%), Gaps = 30/219 (13%)

Query: 60  NIVSEH-------GEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR 111
           N+V  H       GE +  V+++G  L N  ++A+K   R +  DA Q  +E R    L 
Sbjct: 1   NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLA 58

Query: 112 NRR-LANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEY 170
               + N+     EG   +LV + +        L     +          A  +   ++ 
Sbjct: 59  GCTGIPNVYYFGQEGLHNVLVIDLLGPSLE--DLLDLCGRKFSVKTVAMAAKQMLARVQS 116

Query: 171 CTSKERALYHDLNAYRIVFDDDVNPRLSC-----FGLMKNSRDGRSYSTN---------- 215
              K   +Y D+     +     +   +      FG++K  RD  +              
Sbjct: 117 IHEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSG 175

Query: 216 -LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP 253
              +           +    + + G + +  L G     
Sbjct: 176 TARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQ 214

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 79.9 bits (196), Expect = 3e-18
 Identities = 32/200 (16%), Positives = 63/200 (31%), Gaps = 21/200 (10%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCC-EGDERL 129
            +Y G  +     +A+K           Q   E++    ++       +  C  EGD  +
Sbjct: 22  DIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 79

Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189
           +V E +        LF++ ++       L +A  +   +EY  SK   ++ D+     + 
Sbjct: 80  MVMELLGPSLE--DLFNFCSRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLM 136

Query: 190 ---DDDVNPRLSCFGLMKNSRDGRSYSTN-----------LAFTPPEYLRTGRVTPESVM 235
                     +  FGL K  RD R++                +           +    +
Sbjct: 137 GLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDL 196

Query: 236 YSFGTLLLDLLSGKHIPPSH 255
            S G +L+    G       
Sbjct: 197 ESLGYVLMYFNLGSLPWQGL 216

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.3 bits (192), Expect = 2e-17
 Identities = 30/190 (15%), Positives = 70/190 (36%), Gaps = 16/190 (8%)

Query: 72  VVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-- 126
            V          ++A+K+  R   +   A++   E R +  +R+  +  LL      +  
Sbjct: 33  AVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL 92

Query: 127 ----ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL 182
               +  LV  +M  D         + + +       +   + + L Y  +    ++ DL
Sbjct: 93  DDFTDFYLVMPFMGTD----LGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA-GIIHRDL 147

Query: 183 NAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAF--TPPEYLRTGRVTPESVMYSFGT 240
               +  ++D   ++  FGL + +    +      +   P   L   R T    ++S G 
Sbjct: 148 KPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGC 207

Query: 241 LLLDLLSGKH 250
           ++ ++++GK 
Sbjct: 208 IMAEMITGKT 217

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.3 bits (187), Expect = 1e-16
 Identities = 33/196 (16%), Positives = 63/196 (32%), Gaps = 18/196 (9%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCC----CEG 125
            V +      Q + A+K        D  +   E     +  +   +  ++          
Sbjct: 27  KVLQIFNKRTQEKFALKMLQ-----DCPKARREVELHWRASQCPHIVRIVDVYENLYAGR 81

Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
              L+V E +    L   +     Q         +   I EA++Y  S     + D+   
Sbjct: 82  KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPE 140

Query: 186 RIVFDDDVNP---RLSCFGLMKNSRDGRSYSTN---LAFTPPEYLRTGRVTPESVMYSFG 239
            +++         +L+ FG  K +    S +T      +  PE L   +      M+S G
Sbjct: 141 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 200

Query: 240 TLLLDLLSGKHIPPSH 255
            ++  LL G     S+
Sbjct: 201 VIMYILLCGYPPFYSN 216

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.0 bits (186), Expect = 1e-16
 Identities = 38/191 (19%), Positives = 65/191 (34%), Gaps = 11/191 (5%)

Query: 72  VVYKGK-LENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
            V   +        A+K   +    A  +    + E+R +   R+  L  L       D 
Sbjct: 20  KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDR 79

Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
              V EY     L  HL        + A        I  ALEY  S+   +Y D+    +
Sbjct: 80  LCFVMEYANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLHSR-DVVYRDIKLENL 136

Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLL 243
           + D D + +++ FGL K      +       TP    PE L           +  G ++ 
Sbjct: 137 MLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 196

Query: 244 DLLSGKHIPPS 254
           +++ G+    +
Sbjct: 197 EMMCGRLPFYN 207

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 72.5 bits (177), Expect = 2e-15
 Identities = 33/184 (17%), Positives = 60/184 (32%), Gaps = 8/184 (4%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQ---FLEEARAVGQLRNRRLANLLGCCCEGDE 127
            V   K  E+    A+K  ++      +Q    L E R +  +    L  L     +   
Sbjct: 56  RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 115

Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
             +V EY+    +  HL                A  I    EY  S    +Y DL    +
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL-DLIYRDLKPENL 172

Query: 188 VFDDDVNPRLSCFGLMKNSRD-GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
           + D     +++ FG  K  +    +         PE + +         ++ G L+ ++ 
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMA 232

Query: 247 SGKH 250
           +G  
Sbjct: 233 AGYP 236

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.4 bits (153), Expect = 3e-12
 Identities = 35/202 (17%), Positives = 71/202 (35%), Gaps = 8/202 (3%)

Query: 61  IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLAN 117
            +S  G  A   V      +   R+AVK+ +R   +   A++   E R +  +++  +  
Sbjct: 22  NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 81

Query: 118 LLGCCCEGDERLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKE 175
           LL             +      L     +   + Q +       +   I   L+Y  S  
Sbjct: 82  LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 140

Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGL--MKNSRDGRSYSTNLAFTPPEYLRTGRVTPES 233
             ++ DL    +  ++D   ++  FGL    +       +T     P   L         
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTV 200

Query: 234 VMYSFGTLLLDLLSGKHIPPSH 255
            ++S G ++ +LL+G+ + P  
Sbjct: 201 DIWSVGCIMAELLTGRTLFPGT 222

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 60.8 bits (146), Expect = 2e-11
 Identities = 21/201 (10%), Positives = 62/201 (30%), Gaps = 23/201 (11%)

Query: 72  VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
            V+  K + N   +A+K              +E + + ++ +               +LL
Sbjct: 28  TVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLL 86

Query: 131 VAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKER 176
                        +  +E               + +      +++  +   L+Y   +  
Sbjct: 87  DHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG 146

Query: 177 ALYHDLNAYRIVFDDD------VNPRLSCFGLMKNSRDGRSYS-TNLAFTPPEYLRTGRV 229
            ++ D+    ++ +        +  +++  G      +  + S     +  PE L     
Sbjct: 147 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPW 206

Query: 230 TPESVMYSFGTLLLDLLSGKH 250
              + ++S   L+ +L++G  
Sbjct: 207 GCGADIWSTACLIFELITGDF 227

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 45.2 bits (106), Expect = 2e-06
 Identities = 20/147 (13%), Positives = 35/147 (23%), Gaps = 25/147 (17%)

Query: 72  VVYKGKLENQFRIAVKRFNRSA----------WPDARQFLEEARAVGQLRNRRLANLLGC 121
            V+    E      VK                      F   A    +   R L  L G 
Sbjct: 15  AVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGL 74

Query: 122 CC----EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA 177
                   +   ++ E +            E   ++      V   I E +     +   
Sbjct: 75  AVPKVYAWEGNAVLMELI---------DAKELYRVRVENPDEVLDMILEEVAKFYHR-GI 124

Query: 178 LYHDLNAYRIVFDDDVNPRLSCFGLMK 204
           ++ DL+ Y  V   +    +  F    
Sbjct: 125 VHGDLSQY-NVLVSEEGIWIIDFPQSV 150

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	264
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.92
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.88
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.38
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	98.29
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	97.76
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	97.41
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	97.32

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-51  Score=339.93  Aligned_cols=196  Identities=18%  Similarity=0.275  Sum_probs=177.8

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      ..|+++++||+|+||+||+|.+ .+|+.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            3589999999999999999994 568999999998665555677999999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----Cc
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS  211 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~~  211 (264)
                      ++++|.+++.+   ..+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++.....    ..
T Consensus       100 ~gg~L~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~-~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~  175 (293)
T d1yhwa1         100 AGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST  175 (293)
T ss_dssp             TTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCC
T ss_pred             CCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCcHHHeEECCCCcEeeccchhheeeccccccccc
Confidence            99999998853   4699999999999999999999999 9999999999999999999999999999865432    34


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ..||+.|+|||++.+..++.++|||||||++|+|++|+.||....
T Consensus       176 ~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~  220 (293)
T d1yhwa1         176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN  220 (293)
T ss_dssp             CCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             cccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCC
Confidence            468999999999999999999999999999999999999997644

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-51  Score=334.88  Aligned_cols=197  Identities=19%  Similarity=0.179  Sum_probs=173.1

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      ++|++++.||+|+||+||+|.+ .+++.||+|+++..... ..+.+.+|++++++++||||+++++++.+++..++||||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            4688999999999999999995 56899999999765422 345688999999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC------
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD------  208 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~------  208 (264)
                      +++|+|.+++.  ....+++..++.++.||+.||.|||++ ||+||||||+|||+++++.+||+|||+++....      
T Consensus        85 ~~gg~L~~~l~--~~~~l~e~~~~~i~~qi~~al~ylH~~-~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~  161 (271)
T d1nvra_          85 CSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL  161 (271)
T ss_dssp             CTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred             cCCCcHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHc-CCccCcccHHHEEECCCCCEEEccchhheeeccCCcccc
Confidence            99999999986  456799999999999999999999999 999999999999999999999999999986432      


Q ss_pred             CCcccccccccccccccCCCC-CCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 GRSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 ~~~~~~~~~y~aPE~~~~~~~-~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||....
T Consensus       162 ~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~  210 (271)
T d1nvra_         162 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS  210 (271)
T ss_dssp             BCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSS
T ss_pred             ccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCC
Confidence            234578999999999988876 678999999999999999999997544

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-51  Score=332.72  Aligned_cols=198  Identities=20%  Similarity=0.301  Sum_probs=177.0

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      ++|++++.||+|+||+||++.+ .+++.||+|++.+..   ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            4588999999999999999996 568899999987432   223456889999999999999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--C
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--R  210 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--~  210 (264)
                      ||+++|+|.+++..  ...+++..+..++.||+.||.|||++ |++||||||+||+++.++.+||+|||+++.....  .
T Consensus        86 Ey~~~g~L~~~l~~--~~~l~e~~~~~i~~qi~~al~~lH~~-~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~  162 (263)
T d2j4za1          86 EYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT  162 (263)
T ss_dssp             ECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCE
T ss_pred             eecCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeeeeccccceecCCCCEeecccceeeecCCCccc
Confidence            99999999999863  45699999999999999999999999 9999999999999999999999999999865543  3


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                      ...||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus       163 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~  209 (263)
T d2j4za1         163 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY  209 (263)
T ss_dssp             ETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred             ccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCH
Confidence            45789999999999998999999999999999999999999976543

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-51  Score=336.55  Aligned_cols=197  Identities=17%  Similarity=0.246  Sum_probs=176.6

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      .|+++++||+|+||+||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||++
T Consensus        13 ~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~   92 (288)
T d2jfla1          13 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA   92 (288)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             CeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCC
Confidence            478899999999999999995 5688999999987766677789999999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC----CCcc
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSY  212 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~----~~~~  212 (264)
                      +|+|.+++.+ ....+++..+..++.||+.||.|||++ ||+||||||+||+++.++.+||+|||+++....    ....
T Consensus        93 ~g~L~~~~~~-~~~~l~e~~~~~i~~qi~~gL~ylH~~-~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~  170 (288)
T d2jfla1          93 GGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDN-KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF  170 (288)
T ss_dssp             TEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCC
T ss_pred             CCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CEEEeecChhheeECCCCCEEEEechhhhccCCCccccccc
Confidence            9999998754 345799999999999999999999999 999999999999999999999999999875432    2346


Q ss_pred             ccccccccccccc-----CCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          213 STNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       213 ~~~~~y~aPE~~~-----~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .||+.|+|||++.     +..++.++|||||||++|||++|+.||....
T Consensus       171 ~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~  219 (288)
T d2jfla1         171 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELN  219 (288)
T ss_dssp             CSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             ccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCC
Confidence            7899999999984     3458899999999999999999999997644

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-51  Score=340.37  Aligned_cols=199  Identities=18%  Similarity=0.230  Sum_probs=175.8

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      ++|+++++||+|+||+||+|++ .+++.||+|+++.... ...+.+.+|+.+|++++||||+++++++.+.+..++||||
T Consensus         6 d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy   85 (322)
T d1s9ja_           6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH   85 (322)
T ss_dssp             GGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             cCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            4688999999999999999995 5689999999976533 3346789999999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC--CCCcc
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--DGRSY  212 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~--~~~~~  212 (264)
                      +++++|.+++.+  ...+++..+..++.|++.||.|||++.+|+||||||+|||++.++.+||+|||+|+...  .....
T Consensus        86 ~~gg~L~~~l~~--~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~  163 (322)
T d1s9ja_          86 MDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF  163 (322)
T ss_dssp             CTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---
T ss_pred             CCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCccccc
Confidence            999999999963  34699999999999999999999973289999999999999999999999999998543  23456


Q ss_pred             cccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       213 ~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                      .||+.|+|||++.+..++.++||||+||++|||++|+.||.....
T Consensus       164 ~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~  208 (322)
T d1s9ja_         164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA  208 (322)
T ss_dssp             CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCT
T ss_pred             cCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH
Confidence            899999999999999999999999999999999999999976543

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.5e-50  Score=334.45  Aligned_cols=195  Identities=19%  Similarity=0.218  Sum_probs=175.7

Q ss_pred             ccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh---hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      |+.+++||+|+||+||+|++ .+++.||+|+++.....   ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus        17 y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~   96 (309)
T d1u5ra_          17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY   96 (309)
T ss_dssp             EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEe
Confidence            78899999999999999995 56889999999765432   235688999999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCcccc
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST  214 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~  214 (264)
                      +.+++|..++.  ....+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++..........|
T Consensus        97 ~~~g~l~~~~~--~~~~l~e~~~~~i~~qi~~aL~yLH~~-~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~G  173 (309)
T d1u5ra_          97 CLGSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG  173 (309)
T ss_dssp             CSEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred             cCCCchHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeccCCCcceEEECCCCCEEEeecccccccCCCCcccc
Confidence            99998877665  346799999999999999999999999 999999999999999999999999999998887778899


Q ss_pred             cccccccccccC---CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          215 NLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       215 ~~~y~aPE~~~~---~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      |+.|+|||++.+   ..++.++|||||||++|||++|+.||....
T Consensus       174 T~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~  218 (309)
T d1u5ra_         174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN  218 (309)
T ss_dssp             CGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred             CccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCC
Confidence            999999999864   358999999999999999999999997543

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-50  Score=326.39  Aligned_cols=194  Identities=24%  Similarity=0.355  Sum_probs=166.3

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      ++++++++||+|+||.||+|.+.++..||+|+++... ...+++.+|++++++++||||+++++++..++..++||||++
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~   83 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   83 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence            4678899999999999999999888899999998654 345679999999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-----Cc
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----RS  211 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-----~~  211 (264)
                      +|+|.+++.. ....+++..++.++.||+.||.|||++ +++||||||+||++++++.+||+|||+++.....     ..
T Consensus        84 ~g~L~~~l~~-~~~~~~~~~~~~i~~qia~gl~~lH~~-~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~  161 (263)
T d1sm2a_          84 HGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG  161 (263)
T ss_dssp             TCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCTTCSGGGEEECGGGCEEECSCC---------------
T ss_pred             CCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHhhhcc-ceeecccchhheeecCCCCeEecccchheeccCCCceeecc
Confidence            9999998864 446789999999999999999999999 9999999999999999999999999999765432     22


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCC
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                      ..+|..|+|||++.+..++.++|||||||++|||+|+..|+.
T Consensus       162 ~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~  203 (263)
T d1sm2a_         162 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY  203 (263)
T ss_dssp             ---CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             eecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCC
Confidence            456889999999999999999999999999999999655544

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.5e-50  Score=330.67  Aligned_cols=198  Identities=22%  Similarity=0.337  Sum_probs=176.6

Q ss_pred             CccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      .+++++.++||+|+||+||+|.+. +++.||+|+++... ...+++.+|++++++++||||+++++++.+++..++||||
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~   94 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   94 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeec
Confidence            456788899999999999999964 58899999997654 3467799999999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCCc---
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS---  211 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~~---  211 (264)
                      +++|+|.+++.......+++..++.++.||+.||.|||++ +|+||||||+|||+++++.+||+|||+++.......   
T Consensus        95 ~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~-~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~  173 (287)
T d1opja_          95 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH  173 (287)
T ss_dssp             CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEE
T ss_pred             ccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC-CcccCccccCeEEECCCCcEEEccccceeecCCCCceee
Confidence            9999999999765667899999999999999999999999 999999999999999999999999999987544322   


Q ss_pred             --ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          212 --YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       212 --~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                        ..+++.|+|||++.+..++.++|||||||++|||++|..||...
T Consensus       174 ~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~  219 (287)
T d1opja_         174 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG  219 (287)
T ss_dssp             TTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             ccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCc
Confidence              24678899999999999999999999999999999987776543

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-50  Score=332.12  Aligned_cols=197  Identities=17%  Similarity=0.191  Sum_probs=175.6

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      ++|++++.||+|+||+||+|.+ .+++.||+|++....   ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            5689999999999999999995 568999999997432   223467899999999999999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---  209 (264)
                      ||+++|+|.+++.  ....+++..++.++.|++.||.|||++ +|+||||||+||++++++.+||+|||+++.....   
T Consensus        88 Ey~~gg~L~~~~~--~~~~l~e~~~~~~~~qi~~al~ylH~~-~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~  164 (288)
T d1uu3a_          88 SYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ  164 (288)
T ss_dssp             CCCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             EccCCCCHHHhhh--ccCCCCHHHHHHHHHHHHHHHHhhccc-cEEcCcCCccccccCCCceEEecccccceecccCCcc
Confidence            9999999999886  345799999999999999999999999 9999999999999999999999999999865422   


Q ss_pred             ---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                         ....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       165 ~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~  214 (288)
T d1uu3a_         165 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN  214 (288)
T ss_dssp             -----CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcC
Confidence               23468999999999999999999999999999999999999998654

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-50  Score=330.02  Aligned_cols=200  Identities=18%  Similarity=0.233  Sum_probs=166.3

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEe--CCcceE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLL  130 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~l  130 (264)
                      .++|++++.||+|+||+||+++. .+|+.||+|.++....  ...+.+.+|++++++++||||+++++++.+  .+.+++
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i   82 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   82 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence            35688999999999999999995 5689999999986543  234568899999999999999999999865  456899


Q ss_pred             EEecCCCCCHHHhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCC-----ceeeccCCCCeeeCCCCCeEEcccCCC
Q 024659          131 VAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKER-----ALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lh~~~~-----i~H~dl~~~Nil~~~~~~~kl~dfg~~  203 (264)
                      ||||+++|+|.+++...  ....+++..++.++.||+.||.|||++ +     |+||||||+||+++.++.+||+|||++
T Consensus        83 vmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~-~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a  161 (269)
T d2java1          83 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR-SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA  161 (269)
T ss_dssp             EEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHH-CC---------CCGGGEEECTTSCEEECCHHHH
T ss_pred             EEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCCCCEEeCcCchhhcCcCCCCcEEEeeccce
Confidence            99999999999998642  346799999999999999999999986 5     999999999999999999999999999


Q ss_pred             cccCCC----CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          204 KNSRDG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       204 ~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      +.....    ....+|+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       162 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~  218 (269)
T d2java1         162 RILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS  218 (269)
T ss_dssp             HHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             eecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCC
Confidence            865432    34578999999999999999999999999999999999999997654

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=9.6e-50  Score=336.45  Aligned_cols=200  Identities=20%  Similarity=0.195  Sum_probs=179.9

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      ++.|++++.||+|+||.||+|.. .+++.||+|+++.....+...+.+|++++++++||||+++++++.+.+..++||||
T Consensus        28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  107 (352)
T d1koba_          28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  107 (352)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            45689999999999999999995 56999999999876655566788999999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeC--CCCCeEEcccCCCcccCCCC--
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD--DDVNPRLSCFGLMKNSRDGR--  210 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~--~~~~~kl~dfg~~~~~~~~~--  210 (264)
                      +++++|.+.+.. ....+++..++.++.||+.||.|||++ ||+||||||+|||++  .++.+||+|||+++......  
T Consensus       108 ~~gg~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~-~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~  185 (352)
T d1koba_         108 LSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEH-SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV  185 (352)
T ss_dssp             CCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred             CCCChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccccccccccccCCCeEEEeecccceecCCCCce
Confidence            999999988753 445799999999999999999999999 999999999999998  56899999999998765443  


Q ss_pred             -cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       211 -~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                       ...+|+.|+|||++.+..++.++|||||||++|||++|+.||.+...
T Consensus       186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~  233 (352)
T d1koba_         186 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD  233 (352)
T ss_dssp             EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH
T ss_pred             eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence             34789999999999999999999999999999999999999986543

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-49  Score=334.25  Aligned_cols=199  Identities=18%  Similarity=0.219  Sum_probs=178.6

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      .++|++++.||+|+||.||+++. .+++.||+|++++..   ....+.+.+|+.+|++++||||+++++++.+.+.+++|
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv   83 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence            45689999999999999999995 678999999997532   22356788999999999999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--  209 (264)
                      |||+++|+|.+++.  ....+++..++.++.||+.||.|||++ ||+||||||+|||++.+|.+||+|||+++.....  
T Consensus        84 ~ey~~gg~L~~~~~--~~~~~~e~~~~~~~~qil~al~ylH~~-~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~  160 (337)
T d1o6la_          84 MEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA  160 (337)
T ss_dssp             EECCTTCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred             eeccCCCchhhhhh--cccCCcHHHHHHHHHHHhhhhhhhhhc-CccccccCHHHeEecCCCCEEEeecccccccccCCc
Confidence            99999999999987  345789999999999999999999999 9999999999999999999999999999865432  


Q ss_pred             --CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                        ....||+.|+|||++.+..++.++|||||||++|||++|++||.....
T Consensus       161 ~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~  210 (337)
T d1o6la_         161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH  210 (337)
T ss_dssp             CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCH
Confidence              235789999999999999999999999999999999999999987654

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-50  Score=327.06  Aligned_cols=196  Identities=25%  Similarity=0.383  Sum_probs=172.7

Q ss_pred             CccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      ++.++++++||+|+||.||+|.+.++..||||+++... ...+.+.+|++++++++||||+++++++. .+..++||||+
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~iv~Ey~   89 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM   89 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred             HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeEEEEEeC
Confidence            45688899999999999999999888899999998654 34567999999999999999999999875 46689999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-----C
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R  210 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-----~  210 (264)
                      ++|+|.+++.......+++..++.++.||+.||.|||++ +++||||||+||++++++.+||+|||+++.....     .
T Consensus        90 ~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~-~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~  168 (272)
T d1qpca_          90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE  168 (272)
T ss_dssp             TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred             CCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCccchhheeeecccceeeccccceEEccCCcccccc
Confidence            999999988643445699999999999999999999999 9999999999999999999999999999876433     2


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCC
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS  254 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~  254 (264)
                      ...+++.|+|||++.+..++.++|||||||++|||+||..|+..
T Consensus       169 ~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~  212 (272)
T d1qpca_         169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP  212 (272)
T ss_dssp             TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred             ccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCC
Confidence            34577899999999988899999999999999999997666543

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.5e-49  Score=330.83  Aligned_cols=198  Identities=19%  Similarity=0.232  Sum_probs=177.8

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      ++|++++.||+|+||+||+|++ .+|+.||+|+++...   ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            4688999999999999999995 568999999997432   233567889999999999999999999999999999999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-Cc
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RS  211 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-~~  211 (264)
                      ||+.+++|..++.  ....+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+++..... ..
T Consensus        84 E~~~gg~l~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~-~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~  160 (316)
T d1fota_          84 DYIEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLHSK-DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYT  160 (316)
T ss_dssp             CCCCSCBHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCC
T ss_pred             eecCCcccccccc--ccccccccHHHHHHHHHHHhhhhhccC-cEEccccCchheeEcCCCCEEEecCccceEecccccc
Confidence            9999999999886  455688899999999999999999999 9999999999999999999999999999876543 34


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                      ..||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus       161 ~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~  206 (316)
T d1fota_         161 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT  206 (316)
T ss_dssp             CCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred             ccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCH
Confidence            6789999999999999999999999999999999999999976543

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.7e-50  Score=330.82  Aligned_cols=210  Identities=21%  Similarity=0.320  Sum_probs=169.6

Q ss_pred             CHHHHHHHhCCC------ccccccccCCCCCCCeEEEEEeC-CC---CEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCC
Q 024659           45 SIETLRTATSGF------AMENIVSEHGEKAPNVVYKGKLE-NQ---FRIAVKRFNRSAW-PDARQFLEEARAVGQLRNR  113 (264)
Q Consensus        45 ~~~~~~~~~~~~------~~~~~l~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~  113 (264)
                      +++++..++.+|      +.+++.+.||+|+||+||+|.+. ++   ..||+|.+..... ...+.+.+|++++++++||
T Consensus         8 t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~Hp   87 (299)
T d1jpaa_           8 TFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHP   87 (299)
T ss_dssp             GSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCT
T ss_pred             CHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCC
Confidence            344444444443      45677888999999999999964 22   3688999876543 3456799999999999999


Q ss_pred             CccccceeeEeCCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC
Q 024659          114 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV  193 (264)
Q Consensus       114 ~i~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~  193 (264)
                      ||+++++++...+..++||||+++|+|.+++.. ....+++.+++.++.||+.||.|||++ +++||||||+|||++.++
T Consensus        88 nIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~-~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHrDlKp~NILl~~~~  165 (299)
T d1jpaa_          88 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLADM-NYVHRDLAARNILVNSNL  165 (299)
T ss_dssp             TBCCEEEEECSSSSCEEEEECCTTEEHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTC
T ss_pred             CCccEEEEEeeCCEEEEEEEecCCCcceeeecc-ccCCCCHHHHHHHHHHHHHHHHHHhhC-CCccCccccceEEECCCC
Confidence            999999999999999999999999999998864 455799999999999999999999999 999999999999999999


Q ss_pred             CeEEcccCCCcccCCCC---------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          194 NPRLSCFGLMKNSRDGR---------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       194 ~~kl~dfg~~~~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      .+||+|||+++......         ...+|+.|+|||++.+..++.++|||||||++|||+| |+.||....
T Consensus       166 ~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~  238 (299)
T d1jpaa_         166 VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT  238 (299)
T ss_dssp             CEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred             cEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCC
Confidence            99999999998654321         1245789999999999999999999999999999998 788887544

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-49  Score=324.21  Aligned_cols=197  Identities=20%  Similarity=0.322  Sum_probs=168.5

Q ss_pred             CCccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCC--CChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEE
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA  132 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  132 (264)
                      ..+.|++.+.||+|+||+||+|++.+  .||+|+++..  .....+.+.+|++++++++||||+++++++. .+..++||
T Consensus         6 ~~~~~~~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~~lv~   82 (276)
T d1uwha_           6 PDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVT   82 (276)
T ss_dssp             CTTCCCCCSEEEECSSCEEEEEESSS--EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred             ccccEEEEEEEeeCCCcEEEEEEECC--EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccEEEEEE
Confidence            34567888899999999999998654  5999999754  3345677999999999999999999999875 45689999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC---
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---  209 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~---  209 (264)
                      ||+++|+|.+++.. ....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.....   
T Consensus        83 Ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~-~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~  160 (276)
T d1uwha_          83 QWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS  160 (276)
T ss_dssp             ECCCEEEHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEETTSSEEECCCCCSCC-------
T ss_pred             ecCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHhcC-CEeccccCHHHEEEcCCCCEEEccccceeeccccCCc
Confidence            99999999999964 445799999999999999999999999 9999999999999999999999999999765322   


Q ss_pred             ---CcccccccccccccccCC---CCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 ---RSYSTNLAFTPPEYLRTG---RVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ---~~~~~~~~y~aPE~~~~~---~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                         ....+|+.|+|||++.+.   .++.++|||||||++|||+||+.||....
T Consensus       161 ~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~  213 (276)
T d1uwha_         161 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN  213 (276)
T ss_dssp             -----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             ccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCC
Confidence               234689999999998643   48899999999999999999999997543

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.4e-49  Score=329.81  Aligned_cols=197  Identities=17%  Similarity=0.195  Sum_probs=161.5

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      .|++++.||+|+||+||+|++ .+++.||+|++...... ....+.+|+.++++++||||+++++++.+++..++||||+
T Consensus        10 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~   89 (307)
T d1a06a_          10 IYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLV   89 (307)
T ss_dssp             TEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence            388999999999999999995 46889999999765422 2345778999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeC---CCCCeEEcccCCCcccCCC---
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDG---  209 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~---~~~~~kl~dfg~~~~~~~~---  209 (264)
                      ++++|.+++.  ....+++..+..++.||+.||.|||++ +++||||||+||++.   +++.+||+|||+++.....   
T Consensus        90 ~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~-~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~  166 (307)
T d1a06a_          90 SGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDL-GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL  166 (307)
T ss_dssp             CSCBHHHHHH--TCSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSSSTTCCEEECCC------------
T ss_pred             CCCcHHHhhh--cccCCCHHHHHHHHHHHHHHHHhhhhc-eeeeEEecccceeecccCCCceEEEeccceeEEccCCCee
Confidence            9999999996  456799999999999999999999999 999999999999995   5789999999999865433   


Q ss_pred             CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||.+...
T Consensus       167 ~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~  214 (307)
T d1a06a_         167 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND  214 (307)
T ss_dssp             ------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             eeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCH
Confidence            345689999999999999999999999999999999999999986543

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=2.3e-49  Score=333.93  Aligned_cols=198  Identities=21%  Similarity=0.196  Sum_probs=178.6

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      +.|++++.||+|+||.||+|.+ .+|+.||+|++........+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  105 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  105 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            4588999999999999999995 568999999998776666677899999999999999999999999999999999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC--CCCeEEcccCCCcccCCCC---
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD--DVNPRLSCFGLMKNSRDGR---  210 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~--~~~~kl~dfg~~~~~~~~~---  210 (264)
                      ++|+|.+++.. ....+++..+..++.||+.||.|||++ |++||||||+||+++.  ++.+||+|||+++......   
T Consensus       106 ~gg~L~~~l~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~-~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~  183 (350)
T d1koaa2         106 SGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK  183 (350)
T ss_dssp             CSCBHHHHHTC-TTSCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEE
T ss_pred             CCCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhc-CCeeeeechhHeeeccCCCCeEEEeecchheecccccccc
Confidence            99999999854 345699999999999999999999999 9999999999999964  5889999999998765433   


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ...+|+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus       184 ~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~  229 (350)
T d1koaa2         184 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN  229 (350)
T ss_dssp             EECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             eecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCC
Confidence            3578999999999999999999999999999999999999997654

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-49  Score=319.47  Aligned_cols=193  Identities=19%  Similarity=0.251  Sum_probs=166.8

Q ss_pred             cccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEe----CCcceEEE
Q 024659           60 NIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLLVA  132 (264)
Q Consensus        60 ~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~  132 (264)
                      ++.++||+|+||+||+|.+ .+++.||+|.+....  ....+.+.+|++++++++||||+++++++.+    ...+++||
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivm   91 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT   91 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEE
Confidence            4555789999999999995 468899999987542  2345678999999999999999999999865    34578999


Q ss_pred             ecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC--ceeeccCCCCeeeC-CCCCeEEcccCCCcccCCC
Q 024659          133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       133 e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~--i~H~dl~~~Nil~~-~~~~~kl~dfg~~~~~~~~  209 (264)
                      ||+++++|.+++..  ...+++..++.++.||+.||+|||++ +  |+||||||+|||++ +++.+||+|||+++.....
T Consensus        92 E~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~gl~yLH~~-~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~  168 (270)
T d1t4ha_          92 ELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS  168 (270)
T ss_dssp             ECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred             eCCCCCcHHHHHhc--cccccHHHHHHHHHHHHHHHHHHHHC-CCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCC
Confidence            99999999999963  45799999999999999999999998 7  99999999999996 5799999999999865443


Q ss_pred             --CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                        ....||+.|+|||++.+ .++.++|||||||++|||++|+.||....
T Consensus       169 ~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~  216 (270)
T d1t4ha_         169 FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ  216 (270)
T ss_dssp             SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS
T ss_pred             ccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcc
Confidence              34578999999999875 59999999999999999999999997543

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-48  Score=315.40  Aligned_cols=197  Identities=26%  Similarity=0.408  Sum_probs=175.7

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCC
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP  136 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  136 (264)
                      ++++++++||+|+||+||+|++.+++.||+|.++.... ..+++.+|+.++++++||||+++++++.+++..++||||++
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~   82 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA   82 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence            45778899999999999999998888999999987543 45679999999999999999999999999999999999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-----Cc
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----RS  211 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-----~~  211 (264)
                      +|+|.+++.. ....+++..+..++.|++.||.|||++ |++||||||+||++++++.+||+|||+++.....     ..
T Consensus        83 ~g~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~~LH~~-~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~  160 (258)
T d1k2pa_          83 NGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG  160 (258)
T ss_dssp             TEEHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHT-TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCC
T ss_pred             CCcHHHhhhc-cccCCcHHHHHHHHHHHHHHHHHHhhc-CcccccccceeEEEcCCCcEEECcchhheeccCCCceeecc
Confidence            9999998754 445788999999999999999999999 9999999999999999999999999999754432     22


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ..+|+.|+|||.+.+..++.++||||||+++|||+| |+.||....
T Consensus       161 ~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~  206 (258)
T d1k2pa_         161 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT  206 (258)
T ss_dssp             SCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC
T ss_pred             cCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCC
Confidence            457889999999999999999999999999999998 788887543

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=9.3e-49  Score=330.31  Aligned_cols=198  Identities=17%  Similarity=0.179  Sum_probs=178.2

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      .+.|++++.||+|+||.||+|.+ .+|+.||+|++.+..   ....+.+.+|+++++.++||||+++++++......++|
T Consensus        40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v  119 (350)
T d1rdqe_          40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV  119 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccc
Confidence            46799999999999999999995 568999999987432   22346688999999999999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-C
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-R  210 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-~  210 (264)
                      +||+.+++|.+++..  ...+++..++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..... .
T Consensus       120 ~e~~~~g~l~~~l~~--~~~l~e~~~~~i~~qi~~aL~yLH~~-~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~  196 (350)
T d1rdqe_         120 MEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSL-DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW  196 (350)
T ss_dssp             EECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred             cccccccchhhhHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCcCCHHHcccCCCCCEEeeeceeeeecccccc
Confidence            999999999999863  34799999999999999999999999 9999999999999999999999999999876543 4


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ...||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       197 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~  242 (350)
T d1rdqe_         197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ  242 (350)
T ss_dssp             CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcC
Confidence            4578999999999999999999999999999999999999997654

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-48  Score=321.05  Aligned_cols=196  Identities=18%  Similarity=0.182  Sum_probs=174.7

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC------hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW------PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      .|++++.||+|+||+||+|++ .+|+.||+|++.+...      ...+.+.+|++++++++||||+++++++.+.+..++
T Consensus        11 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i   90 (293)
T d1jksa_          11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL   90 (293)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             CEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            488999999999999999995 5689999999865322      124678999999999999999999999999999999


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC----CeEEcccCCCccc
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNS  206 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~----~~kl~dfg~~~~~  206 (264)
                      ||||+++|+|.+++..  ...+++..++.++.|++.||.|||++ +++||||||+||+++.++    .+|++|||++...
T Consensus        91 v~E~~~gg~L~~~i~~--~~~l~~~~~~~~~~qi~~al~yLH~~-~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~  167 (293)
T d1jksa_          91 ILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI  167 (293)
T ss_dssp             EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred             EEEcCCCccccchhcc--ccccchhHHHHHHHHHHHHHHhhhhc-ceeecccccceEEEecCCCcccceEecchhhhhhc
Confidence            9999999999999963  35799999999999999999999999 999999999999998766    5999999999865


Q ss_pred             CCC---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       207 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ...   ....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus       168 ~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~  220 (293)
T d1jksa_         168 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT  220 (293)
T ss_dssp             TTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             CCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCC
Confidence            443   34567899999999999899999999999999999999999998654

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-48  Score=318.97  Aligned_cols=197  Identities=23%  Similarity=0.356  Sum_probs=170.4

Q ss_pred             CccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecC
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      ++++++.++||+|+||.||+|++.++..||+|+++... ...+.+.+|+.++++++|+||+++++++. .+..++||||+
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~   93 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM   93 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEec
Confidence            45688999999999999999999888889999997654 34577999999999999999999999985 56689999999


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-----C
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R  210 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-----~  210 (264)
                      ++|+|..++.......+++.+++.++.||+.||+|||++ +++||||||+||+++.++.+||+|||+++.....     .
T Consensus        94 ~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~-~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  172 (285)
T d1fmka3          94 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ  172 (285)
T ss_dssp             TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCCTTC-----------
T ss_pred             CCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh-heecccccceEEEECCCCcEEEcccchhhhccCCCceeec
Confidence            999999988654456799999999999999999999999 9999999999999999999999999999765332     2


Q ss_pred             cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ...+|+.|+|||++.+..++.++||||||+++|||++|..|+...
T Consensus       173 ~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~  217 (285)
T d1fmka3         173 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG  217 (285)
T ss_dssp             ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred             cccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCC
Confidence            245789999999999999999999999999999999987766543

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-48  Score=317.08  Aligned_cols=195  Identities=22%  Similarity=0.309  Sum_probs=167.9

Q ss_pred             ccccc-cCCCCCCCeEEEEEeC---CCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           59 ENIVS-EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        59 ~~~l~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      +.+.. +||+|+||.||+|.+.   ++..||+|+++.... ...+++.+|++++++++||||+++++++.. +..++|||
T Consensus        10 ~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE   88 (285)
T d1u59a_          10 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVME   88 (285)
T ss_dssp             EEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEE
T ss_pred             eEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEE
Confidence            33444 4899999999999753   355799999986543 345679999999999999999999999864 56899999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC---
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~---  210 (264)
                      |+++|+|.+++.. ....+++..+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||+++......   
T Consensus        89 ~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~ylH~~-~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~  166 (285)
T d1u59a_          89 MAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYY  166 (285)
T ss_dssp             CCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEE
T ss_pred             eCCCCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCcCchhheeeccCCceeeccchhhhccccccccc
Confidence            9999999998753 456799999999999999999999999 99999999999999999999999999998654322   


Q ss_pred             ----cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       211 ----~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                          ...+|+.|+|||++.+..++.++|||||||++|||+| |+.||....
T Consensus       167 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~  217 (285)
T d1u59a_         167 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK  217 (285)
T ss_dssp             CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred             ccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCC
Confidence                2356789999999998899999999999999999998 899987543

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-47  Score=320.36  Aligned_cols=200  Identities=17%  Similarity=0.194  Sum_probs=178.0

Q ss_pred             CCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      -|+.|+++++||+|+||+||+|.+ .+++.||+|.++... .+...+.+|+++|+.++||||+++++++.+.+.+++|||
T Consensus         3 ~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE   81 (321)
T d1tkia_           3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE   81 (321)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             CccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence            467899999999999999999995 568899999998765 334568899999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC--CCeEEcccCCCcccCCCC-
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD--VNPRLSCFGLMKNSRDGR-  210 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~--~~~kl~dfg~~~~~~~~~-  210 (264)
                      |+.+++|.+++.. ....+++..+..++.||+.||.|||++ ||+||||||+||+++.+  ..+||+|||++....... 
T Consensus        82 ~~~gg~L~~~i~~-~~~~l~e~~~~~i~~qi~~al~yLH~~-~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~  159 (321)
T d1tkia_          82 FISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSH-NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN  159 (321)
T ss_dssp             CCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred             cCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHc-CCCcccccccceeecCCCceEEEEcccchhhccccCCc
Confidence            9999999999964 334689999999999999999999999 99999999999999854  589999999998765433 


Q ss_pred             --cccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          211 --SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       211 --~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                        ...+++.|+|||.+.+..++.++|||||||++|+|++|..||.....
T Consensus       160 ~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~  208 (321)
T d1tkia_         160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN  208 (321)
T ss_dssp             EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH
T ss_pred             ccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCH
Confidence              34678999999999998999999999999999999999999986653

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.8e-48  Score=321.02  Aligned_cols=198  Identities=19%  Similarity=0.273  Sum_probs=173.3

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCC---ChhHHHHHHHHHHHh-cCCCCCccccceeeEeCCcceEE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVG-QLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~-~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      ++|++++.||+|+||+||+|+. .+++.||+|++++..   ....+.+..|..++. .++||||+++++++.+++..++|
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            4688899999999999999995 568999999997431   223455666776655 68999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--  209 (264)
                      |||+++|+|.+++.  ....+++..++.++.||+.||+|||++ +++||||||+|||+++++.+||+|||+++.....  
T Consensus        82 mEy~~~g~L~~~i~--~~~~~~e~~~~~~~~qi~~al~ylH~~-~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~  158 (320)
T d1xjda_          82 MEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSK-GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA  158 (320)
T ss_dssp             EECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred             EeecCCCcHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCcccceeecCCCceeccccchhhhcccccc
Confidence            99999999999996  345689999999999999999999999 9999999999999999999999999999854332  


Q ss_pred             --CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       210 --~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                        ....||+.|+|||++.+..++.++|||||||++|||++|+.||.+...
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~  208 (320)
T d1xjda_         159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE  208 (320)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCH
Confidence              334689999999999999999999999999999999999999986554

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.8e-47  Score=324.09  Aligned_cols=198  Identities=18%  Similarity=0.148  Sum_probs=170.9

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh---h---HHHHHHHHHHHhcCCCCCccccceeeEeCCcc
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---D---ARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  128 (264)
                      .++|++++.||+|+||.||+|++ .+|+.||+|++.+....   .   .....+++++++.++||||+++++++.+.+..
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~   82 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL   82 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence            35688999999999999999995 56899999998643211   1   12233457788888999999999999999999


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      ++||||+++++|.+++..  ...+++..++.++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++....
T Consensus        83 ~ivmE~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~ylH~~-~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~  159 (364)
T d1omwa3          83 SFILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSK  159 (364)
T ss_dssp             EEEECCCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECSSSCEEECCCTTCEECSS
T ss_pred             EEEEEecCCCcHHHHHHh--cccccHHHHHHHHHHHHHHHHHHHHC-CccceeeccceeEEcCCCcEEEeeeceeeecCC
Confidence            999999999999999963  45688999999999999999999999 999999999999999999999999999986544


Q ss_pred             C--CcccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 G--RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 ~--~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .  ....||+.|+|||++.. ..++.++|||||||++|||++|+.||....
T Consensus       160 ~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~  210 (364)
T d1omwa3         160 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK  210 (364)
T ss_dssp             SCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSC
T ss_pred             CcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCC
Confidence            3  34578999999999975 458999999999999999999999997654

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-48  Score=316.09  Aligned_cols=189  Identities=23%  Similarity=0.294  Sum_probs=163.0

Q ss_pred             cCCCCCCCeEEEEEeCC---CCEEEEEEeCCCC--ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEecCCCC
Q 024659           64 EHGEKAPNVVYKGKLEN---QFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND  138 (264)
Q Consensus        64 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~  138 (264)
                      +||+|+||+||+|.+.+   ++.||+|+++...  ....+++.+|++++++++||||+++++++.. +..++||||+++|
T Consensus        14 ~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~g   92 (277)
T d1xbba_          14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELG   92 (277)
T ss_dssp             EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTTE
T ss_pred             CcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCCC
Confidence            58999999999998532   4689999997543  2335679999999999999999999999854 5678999999999


Q ss_pred             CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC-------c
Q 024659          139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-------S  211 (264)
Q Consensus       139 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~-------~  211 (264)
                      +|.+++.  ....+++..+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||+++......       .
T Consensus        93 ~L~~~l~--~~~~l~~~~~~~i~~qi~~gl~ylH~~-~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~  169 (277)
T d1xbba_          93 PLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH  169 (277)
T ss_dssp             EHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC---
T ss_pred             cHHHHHh--hccCCCHHHHHHHHHHHHHHHhhHHhC-CcccCCCcchhhcccccCcccccchhhhhhccccccccccccc
Confidence            9999987  445799999999999999999999999 99999999999999999999999999998654322       2


Q ss_pred             ccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       212 ~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ..+|+.|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus       170 ~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~  215 (277)
T d1xbba_         170 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK  215 (277)
T ss_dssp             -CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred             cCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCC
Confidence            357889999999999899999999999999999998 899987643

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.6e-48  Score=321.89  Aligned_cols=201  Identities=22%  Similarity=0.284  Sum_probs=170.4

Q ss_pred             CCccccccccCCCCCCCeEEEEEeCC-C-----CEEEEEEeCCCC-ChhHHHHHHHHHHHhcC-CCCCccccceeeEeCC
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKLEN-Q-----FRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGD  126 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~  126 (264)
                      +.+++++.+.||+|+||+||+|++.. +     ..||+|.+.... ......+.+|+.++.++ +||||+++++++.+.+
T Consensus        35 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~  114 (325)
T d1rjba_          35 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG  114 (325)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             CHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCC
Confidence            34668889999999999999998532 2     368999987543 23345688999999998 8999999999999999


Q ss_pred             cceEEEecCCCCCHHHhhhcCC---------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCC
Q 024659          127 ERLLVAEYMPNDTLAKHLFHWE---------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY  185 (264)
Q Consensus       127 ~~~lv~e~~~~~sL~~~l~~~~---------------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~  185 (264)
                      ..++||||+++|+|.+++....                     ...+++..++.++.||+.||.|||++ +|+||||||+
T Consensus       115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~-~IiHRDlKp~  193 (325)
T d1rjba_         115 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK-SCVHRDLAAR  193 (325)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT-TEEETTCSGG
T ss_pred             eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCchh
Confidence            9999999999999999996432                     13578999999999999999999999 9999999999


Q ss_pred             CeeeCCCCCeEEcccCCCcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          186 RIVFDDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       186 Nil~~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ||+++.++.+||+|||+++......      ...+|+.|+|||++.++.++.++|||||||++|||+| |++||....
T Consensus       194 Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~  271 (325)
T d1rjba_         194 NVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP  271 (325)
T ss_dssp             GEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             ccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCC
Confidence            9999999999999999998654332      2346889999999999999999999999999999998 899987644

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=2.1e-47  Score=312.25  Aligned_cols=199  Identities=18%  Similarity=0.174  Sum_probs=175.1

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChh---------HHHHHHHHHHHhcCC-CCCccccceeeEe
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD---------ARQFLEEARAVGQLR-NRRLANLLGCCCE  124 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---------~~~~~~e~~~l~~l~-h~~i~~~~~~~~~  124 (264)
                      ++.|++++.||+|+||+||+++. .+++.||+|+++......         .+.+.+|+.++++++ ||||+++++++.+
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~   81 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   81 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence            56789999999999999999995 678999999997643211         235788999999997 9999999999999


Q ss_pred             CCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCc
Q 024659          125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (264)
Q Consensus       125 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~  204 (264)
                      ++..+|||||+++++|.+++..  ...+++.+++.++.||+.||.|||++ |++||||||+||+++.++.+||+|||+++
T Consensus        82 ~~~~~ivmE~~~~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nill~~~~~~kl~DFG~a~  158 (277)
T d1phka_          82 NTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKL-NIVHRDLKPENILLDDDMNIKLTDFGFSC  158 (277)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             CcceEEEEEcCCCchHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHc-CCcccccccceEEEcCCCCeEEccchhee
Confidence            9999999999999999999974  45799999999999999999999999 99999999999999999999999999998


Q ss_pred             ccCCC---CcccccccccccccccC------CCCCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          205 NSRDG---RSYSTNLAFTPPEYLRT------GRVTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       205 ~~~~~---~~~~~~~~y~aPE~~~~------~~~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                      .....   ....+|..|+|||.+.+      ..++.++||||+||++|||++|+.||.+...
T Consensus       159 ~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~  220 (277)
T d1phka_         159 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ  220 (277)
T ss_dssp             ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             EccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCH
Confidence            65543   34568999999999853      3478899999999999999999999986653

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-47  Score=312.81  Aligned_cols=196  Identities=22%  Similarity=0.317  Sum_probs=164.4

Q ss_pred             cccccccCCCCCCCeEEEEEeCC-C----CEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEE
Q 024659           58 MENIVSEHGEKAPNVVYKGKLEN-Q----FRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV  131 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~~-~----~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv  131 (264)
                      .+++.+.||+|+||.||+|.+.+ +    ..||+|+++..... ....+.+|++++++++||||+++++++.+.+..++|
T Consensus         8 ~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v   87 (283)
T d1mqba_           8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII   87 (283)
T ss_dssp             TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred             HeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEE
Confidence            35566677999999999998543 2    47999999765433 345688999999999999999999999999999999


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC--
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--  209 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~--  209 (264)
                      +||+.++++.+.+.. ....+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++.....  
T Consensus        88 ~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~gl~~lH~~-~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~  165 (283)
T d1mqba_          88 TEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANM-NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE  165 (283)
T ss_dssp             EECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred             EEecccCcchhhhhc-ccccccHHHHHHHHHHHHHhhhhcccc-ccccCccccceEEECCCCeEEEcccchhhcccCCCc
Confidence            999999999988764 456799999999999999999999999 9999999999999999999999999999865332  


Q ss_pred             -----CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          210 -----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       210 -----~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                           ....+|+.|+|||++.+..++.++|||||||++|||++|..|+...
T Consensus       166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~  216 (283)
T d1mqba_         166 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE  216 (283)
T ss_dssp             --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             cceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCcccc
Confidence                 1235688999999999999999999999999999999977666543

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.7e-47  Score=311.49  Aligned_cols=197  Identities=18%  Similarity=0.201  Sum_probs=168.2

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh---hHHHHHHHHHHHhcCCCCCccccceeeEeCCc----c
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDE----R  128 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~  128 (264)
                      ++|++++.||+|+||.||+|.+ .+++.||+|+++.....   ..+.+.+|++++++++||||+++++++...+.    .
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~   86 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   86 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence            4588999999999999999995 57899999999865432   24568899999999999999999999977543    7


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      ++||||+++++|.+++.  ....+++.+++.++.||+.||.|||++ |++||||||+||+++.++..+++|||.+.....
T Consensus        87 ~lvmE~~~g~~L~~~~~--~~~~l~~~~~~~i~~qi~~al~~lH~~-~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~  163 (277)
T d1o6ya_          87 YIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQN-GIIHRDVKPANIMISATNAVKVMDFGIARAIAD  163 (277)
T ss_dssp             EEEEECCCEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTSCEEECCCTTCEECC-
T ss_pred             EEEEECCCCCEehhhhc--ccCCCCHHHHHHHHHHHHHHHHHHHhC-CccCccccCcccccCccccceeehhhhhhhhcc
Confidence            89999999999999886  345799999999999999999999999 999999999999999999999999998764432


Q ss_pred             -------CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 -------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 -------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                             .....||+.|+|||++.+..+++++|||||||++|||+||++||....
T Consensus       164 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~  218 (277)
T d1o6ya_         164 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS  218 (277)
T ss_dssp             ---------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             ccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcC
Confidence                   223468999999999998899999999999999999999999997654

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-47  Score=319.42  Aligned_cols=194  Identities=16%  Similarity=0.168  Sum_probs=168.8

Q ss_pred             cccccccc-CCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhc-CCCCCccccceeeEe----CCcce
Q 024659           57 AMENIVSE-HGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQ-LRNRRLANLLGCCCE----GDERL  129 (264)
Q Consensus        57 ~~~~~l~~-lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~----~~~~~  129 (264)
                      +.|+++++ ||+|+||+||+|.+ .+++.||+|+++.     ...+.+|++++.+ .+||||+++++++.+    ...++
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~   85 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   85 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence            45788876 89999999999995 6689999999964     3457789988665 489999999999875    35689


Q ss_pred             EEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC---CCCeEEcccCCCccc
Q 024659          130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNS  206 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~---~~~~kl~dfg~~~~~  206 (264)
                      +||||+++|+|.+++.......+++.+++.++.||+.||.|||++ |++||||||+||+++.   .+.+||+|||+++..
T Consensus        86 ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~-~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~  164 (335)
T d2ozaa1          86 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET  164 (335)
T ss_dssp             EEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred             EEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc-CCccccccccccccccccccccccccccceeeec
Confidence            999999999999999754456799999999999999999999999 9999999999999985   467999999999865


Q ss_pred             CCC---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       207 ~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ...   ....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+..
T Consensus       165 ~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~  217 (335)
T d2ozaa1         165 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH  217 (335)
T ss_dssp             CCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETT
T ss_pred             cCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCC
Confidence            433   34578999999999998899999999999999999999999997543

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-47  Score=314.39  Aligned_cols=193  Identities=20%  Similarity=0.225  Sum_probs=164.2

Q ss_pred             ccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChh-----HHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           61 IVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD-----ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        61 ~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      .|+.||+|+||+||+|.+ .+++.||+|+++......     .+.+.+|+.++++++||||+++++++...+..++||||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~   81 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF   81 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence            467789999999999995 568999999997543222     23588999999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----C
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R  210 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~  210 (264)
                      +.++++..+..  ....+++..+..++.||+.||+|||++ |++||||||+||+++.++.+||+|||+++.....    .
T Consensus        82 ~~~~~~~~~~~--~~~~l~~~~~~~~~~qil~aL~~lH~~-~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~  158 (299)
T d1ua2a_          82 METDLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQH-WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYT  158 (299)
T ss_dssp             CSEEHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCC
T ss_pred             hcchHHhhhhh--cccCCCHHHHHHHHHHHHHHHHHhhcc-ceecccCCcceEEecCCCccccccCccccccCCCccccc
Confidence            98886666553  456788899999999999999999999 9999999999999999999999999999765432    2


Q ss_pred             cccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ...+|+.|+|||++... .++.++|||||||++|||++|++||....
T Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~  205 (299)
T d1ua2a_         159 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS  205 (299)
T ss_dssp             CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCC
Confidence            34689999999998755 57999999999999999999999997543

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-47  Score=307.85  Aligned_cols=198  Identities=28%  Similarity=0.396  Sum_probs=164.6

Q ss_pred             CCccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEe-CCcceEEEe
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLLVAE  133 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e  133 (264)
                      ..+++++++.||+|+||.||+|.+. +..||+|+++...  ..+.+.+|++++++++||||+++++++.+ .+.+++|||
T Consensus         5 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~e   81 (262)
T d1byga_           5 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE   81 (262)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred             CHHHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEe
Confidence            3456788899999999999999985 5689999997644  45679999999999999999999999865 456899999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-Ccc
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY  212 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-~~~  212 (264)
                      |+++|+|.+++.......+++..++.++.||+.||.|||++ +++||||||+||+++.++.+|++|||+++..... ...
T Consensus        82 y~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~-~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~  160 (262)
T d1byga_          82 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG  160 (262)
T ss_dssp             CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred             ccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC-ceeccccchHhheecCCCCEeecccccceecCCCCccc
Confidence            99999999999643344689999999999999999999999 9999999999999999999999999999865433 334


Q ss_pred             cccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       213 ~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      .++..|+|||++.+..+++++||||||+++|||+| |++||....
T Consensus       161 ~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~  205 (262)
T d1byga_         161 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP  205 (262)
T ss_dssp             -CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC
T ss_pred             cccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCC
Confidence            66889999999999999999999999999999998 566665443

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-46  Score=309.68  Aligned_cols=198  Identities=19%  Similarity=0.277  Sum_probs=170.5

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      +.|+++++||+|+||+||+|.+ .+++.||+|+++....  ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            4688999999999999999995 6689999999975432  224678899999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----  209 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----  209 (264)
                      |+.++ +.+++.......+++..+..++.||+.||+|||++ ||+||||||+||+++.++.+||+|||+++.....    
T Consensus        82 ~~~~~-~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~-~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~  159 (298)
T d1gz8a_          82 FLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY  159 (298)
T ss_dssp             CCSEE-HHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCT
T ss_pred             ecCCc-hhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC-CEEccccCchheeecccCcceeccCCcceeccCCcccc
Confidence            99764 66555544567799999999999999999999999 9999999999999999999999999998765432    


Q ss_pred             CcccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 ~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ....+|+.|+|||.+.... ++.++|||||||++|+|++|+.||....
T Consensus       160 ~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~  207 (298)
T d1gz8a_         160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS  207 (298)
T ss_dssp             TCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             eeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCC
Confidence            3347889999999987766 5789999999999999999999997543

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-46  Score=304.53  Aligned_cols=199  Identities=20%  Similarity=0.260  Sum_probs=163.4

Q ss_pred             CccccccccCCCCCCCeEEEEEeCC----CCEEEEEEeCCCCChh-HHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      .+.|++.+.||+|+||.||+|.+..    +..||+|.++...... .+.+.+|++++++++||||+++++++. .+..++
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~i   84 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI   84 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEE
Confidence            4568899999999999999998643    3568999987654333 456899999999999999999999985 567899


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-  209 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-  209 (264)
                      ||||+++|+|.+++.. ....+++..++.++.||+.||.|||++ +++||||||+||+++.++.+||+|||+++..... 
T Consensus        85 v~E~~~~g~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~-~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~  162 (273)
T d1mp8a_          85 IMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST  162 (273)
T ss_dssp             EEECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred             EEEeccCCcHHhhhhc-cCCCCCHHHHHHHHHHHHHHhhhhccc-CeeccccchhheeecCCCcEEEccchhheeccCCc
Confidence            9999999999998754 456789999999999999999999999 9999999999999999999999999999865432 


Q ss_pred             ----CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCcc
Q 024659          210 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHVS  257 (264)
Q Consensus       210 ----~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~~  257 (264)
                          ....+|+.|+|||++.+..++.++|||||||++|||++ |.+||.....
T Consensus       163 ~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~  215 (273)
T d1mp8a_         163 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN  215 (273)
T ss_dssp             --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG
T ss_pred             ceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCH
Confidence                23356889999999999999999999999999999998 7888875443

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-46  Score=311.64  Aligned_cols=197  Identities=20%  Similarity=0.280  Sum_probs=166.1

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCC----EEEEEEeCCCC-ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceE
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQF----RIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL  130 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l  130 (264)
                      ++|++++.||+|+||+||+|.+. +++    .||+|.++... ....+.+.+|++++++++||||++++++|.++ ..++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~   87 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   87 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence            45889999999999999999853 343    58999987543 33456799999999999999999999999764 5678


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR  210 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~  210 (264)
                      +++++.+++|.+.+.. ....+++..++.++.||+.||.|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus        88 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~-~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~  165 (317)
T d1xkka_          88 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  165 (317)
T ss_dssp             EEECCTTCBHHHHHHH-TSSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTC
T ss_pred             EEEeccCCcccccccc-cccCCCHHHHHHHHHHHHHHHHHHHHc-CcccCcchhhcceeCCCCCeEeeccccceeccccc
Confidence            8999999999998865 566899999999999999999999999 99999999999999999999999999998654322


Q ss_pred             ------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          211 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       211 ------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                            ...+|+.|+|||++.++.++.++|||||||++|||+| |.+||....
T Consensus       166 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~  218 (317)
T d1xkka_         166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP  218 (317)
T ss_dssp             C--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC
T ss_pred             ccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCC
Confidence                  2356899999999999999999999999999999999 677776543

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-46  Score=304.51  Aligned_cols=198  Identities=23%  Similarity=0.310  Sum_probs=162.2

Q ss_pred             CccccccccCCCCCCCeEEEEEeC-C---CCEEEEEEeCCCC---ChhHHHHHHHHHHHhcCCCCCccccceeeEeCCcc
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE-N---QFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  128 (264)
                      ..+|+++++||+|+||.||+|++. .   ...||+|++.+..   ....+++.+|+.++++++||||+++++++.+ +..
T Consensus         7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~   85 (273)
T d1u46a_           7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPM   85 (273)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cch
Confidence            456899999999999999999853 2   2368999987642   2335679999999999999999999999965 567


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      ++|+||++++++.+.+.. ....+++..++.++.||+.||.|||++ +++||||||+||+++.++.+||+|||+++....
T Consensus        86 ~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~-~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~  163 (273)
T d1u46a_          86 KMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESK-RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ  163 (273)
T ss_dssp             EEEEECCTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred             heeeeeecCcchhhhhhc-ccCCCCHHHHHHHHHHHHHHHHHhhhC-CEeeeeecHHHhccccccceeeccchhhhhccc
Confidence            899999999999988764 345699999999999999999999999 999999999999999999999999999987543


Q ss_pred             CC-------cccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          209 GR-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       209 ~~-------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      ..       ...++..|+|||.+.+..++.++||||||+++|||+| |++||....
T Consensus       164 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~  219 (273)
T d1u46a_         164 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN  219 (273)
T ss_dssp             -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred             CCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcC
Confidence            32       2346788999999999889999999999999999998 899987543

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1e-45  Score=306.22  Aligned_cols=199  Identities=24%  Similarity=0.356  Sum_probs=171.5

Q ss_pred             CccccccccCCCCCCCeEEEEEeC------CCCEEEEEEeCCCCChh-HHHHHHHHHHHhcCCCCCccccceeeEeCCcc
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDER  128 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~  128 (264)
                      .+.++++++||+|+||+||+|++.      +++.||+|+++...... .+++.+|++++++++||||+++++++...+..
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~   91 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM   91 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCce
Confidence            456889999999999999999853      35789999998765443 45699999999999999999999999999999


Q ss_pred             eEEEecCCCCCHHHhhhcCC----------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWE----------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR  186 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~----------------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~N  186 (264)
                      ++++||+++++|.+++....                      ...+++..++.++.|++.||+|||++ +++||||||+|
T Consensus        92 ~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~-~ivHrDlKp~N  170 (301)
T d1lufa_          92 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER-KFVHRDLATRN  170 (301)
T ss_dssp             EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGG
T ss_pred             EEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC-CeEeeEEcccc
Confidence            99999999999999986421                      23578899999999999999999999 99999999999


Q ss_pred             eeeCCCCCeEEcccCCCcccCCC------CcccccccccccccccCCCCCCccceechHHHHHHHHhCCC-CCCCC
Q 024659          187 IVFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKH-IPPSH  255 (264)
Q Consensus       187 il~~~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~-~~~~~  255 (264)
                      |+++.++.+||+|||+++.....      ....+++.|+|||.+.+..++.++|||||||++|||++|.. ||...
T Consensus       171 ILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~  246 (301)
T d1lufa_         171 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM  246 (301)
T ss_dssp             EEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred             eEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCC
Confidence            99999999999999998754322      23456789999999999999999999999999999999964 55543

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=9.9e-46  Score=304.33  Aligned_cols=196  Identities=16%  Similarity=0.239  Sum_probs=170.7

Q ss_pred             ccccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCCh--hHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEec
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY  134 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  134 (264)
                      +.|+++++||+|+||+||+|.+.+++.||+|+++.....  ..+.+.+|+.++++++||||+++++++.+.+..++++++
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            468899999999999999999989999999999765422  246789999999999999999999999999999999999


Q ss_pred             CCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC----C
Q 024659          135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R  210 (264)
Q Consensus       135 ~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~----~  210 (264)
                      +.++.+..+..  ....+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+|++|||.+......    .
T Consensus        82 ~~~~~~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~-~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~  158 (286)
T d1ob3a_          82 LDQDLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT  158 (286)
T ss_dssp             CSEEHHHHHHT--STTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred             ehhhhHHHHHh--hcCCcchhhhHHHHHHHHHHHHHhccC-cEEecCCCCceeeEcCCCCEEecccccceecccCccccc
Confidence            98775555553  456799999999999999999999999 9999999999999999999999999998765432    3


Q ss_pred             cccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCC
Q 024659          211 SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       211 ~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ...+++.|+|||.+.+.. ++.++|||||||+++||++|+.||...
T Consensus       159 ~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~  204 (286)
T d1ob3a_         159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGV  204 (286)
T ss_dssp             ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             eecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCC
Confidence            346788999999997654 689999999999999999999999754

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-45  Score=304.88  Aligned_cols=199  Identities=22%  Similarity=0.302  Sum_probs=167.7

Q ss_pred             CCccccccccCCCCCCCeEEEEEeC-CCC--EEEEEEeCCC-CChhHHHHHHHHHHHhcC-CCCCccccceeeEeCCcce
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKLE-NQF--RIAVKRFNRS-AWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL  129 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~  129 (264)
                      +|+++++.+.||+|+||.||+|.+. ++.  .||+|+++.. .....+.+.+|++++.++ +||||+++++++.+.+..+
T Consensus         8 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~   87 (309)
T d1fvra_           8 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY   87 (309)
T ss_dssp             CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred             CHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence            4677888889999999999999954 443  4778887644 333455789999999999 7999999999999999999


Q ss_pred             EEEecCCCCCHHHhhhcC--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCe
Q 024659          130 LVAEYMPNDTLAKHLFHW--------------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP  195 (264)
Q Consensus       130 lv~e~~~~~sL~~~l~~~--------------~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~  195 (264)
                      +||||+++|+|.+++...              ....+++..+..++.||+.||.|+|++ +++||||||+|||++.++.+
T Consensus        88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~-~iiHrDlkp~NIL~~~~~~~  166 (309)
T d1fvra_          88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVA  166 (309)
T ss_dssp             EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECGGGCE
T ss_pred             EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC-CccccccccceEEEcCCCce
Confidence            999999999999998642              235789999999999999999999999 99999999999999999999


Q ss_pred             EEcccCCCcccCCC---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCC-CCC
Q 024659          196 RLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI-PPS  254 (264)
Q Consensus       196 kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~-~~~  254 (264)
                      ||+|||+++.....   ....+|..|+|||.+.+..++.++||||||+++|||++|..| |..
T Consensus       167 kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~  229 (309)
T d1fvra_         167 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCG  229 (309)
T ss_dssp             EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             EEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCC
Confidence            99999998754432   234678999999999999999999999999999999998754 543

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-45  Score=302.52  Aligned_cols=201  Identities=19%  Similarity=0.265  Sum_probs=160.4

Q ss_pred             CCCccccccccCCCCCCCeEEEEEeC------CCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcC-CCCCccccceeeEeC
Q 024659           54 SGFAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEG  125 (264)
Q Consensus        54 ~~~~~~~~l~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~  125 (264)
                      -..+.|+++++||+|+||.||+|.+.      +++.||+|+++.... ...+.+.+|...+.++ +|+||+.+++++...
T Consensus        10 i~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~   89 (299)
T d1ywna1          10 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP   89 (299)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred             ccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccC
Confidence            44567899999999999999999853      246899999986543 3345677888888877 688999999998764


Q ss_pred             -CcceEEEecCCCCCHHHhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeC
Q 024659          126 -DERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD  190 (264)
Q Consensus       126 -~~~~lv~e~~~~~sL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~  190 (264)
                       ...++||||+++|+|.+++....              ...+++..++.++.||+.||.|||++ +|+||||||+|||++
T Consensus        90 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~-~ivHrDlKp~NILl~  168 (299)
T d1ywna1          90 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLS  168 (299)
T ss_dssp             TSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEC
T ss_pred             CCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC-CCcCCcCCccceeEC
Confidence             46899999999999999996421              23578999999999999999999999 999999999999999


Q ss_pred             CCCCeEEcccCCCcccCCC------CcccccccccccccccCCCCCCccceechHHHHHHHHhCC-CCCCCC
Q 024659          191 DDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK-HIPPSH  255 (264)
Q Consensus       191 ~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~-~~~~~~  255 (264)
                      +++.+||+|||+++.....      ....+|+.|+|||++.+..++.++|||||||++|||++|. +||...
T Consensus       169 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~  240 (299)
T d1ywna1         169 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV  240 (299)
T ss_dssp             GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             CCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCC
Confidence            9999999999999754322      2346789999999999999999999999999999999985 456543

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-44  Score=299.82  Aligned_cols=192  Identities=26%  Similarity=0.402  Sum_probs=165.0

Q ss_pred             ccCCCCCCCeEEEEEeCC----CCEEEEEEeCCC-CChhHHHHHHHHHHHhcCCCCCccccceeeEeC-CcceEEEecCC
Q 024659           63 SEHGEKAPNVVYKGKLEN----QFRIAVKRFNRS-AWPDARQFLEEARAVGQLRNRRLANLLGCCCEG-DERLLVAEYMP  136 (264)
Q Consensus        63 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-~~~~lv~e~~~  136 (264)
                      +.||+|+||+||+|.+.+    ...||+|+++.. .....+++.+|++++++++||||+++++++... ...++||||++
T Consensus        33 ~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~  112 (311)
T d1r0pa_          33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK  112 (311)
T ss_dssp             EEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCT
T ss_pred             eEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEee
Confidence            357999999999999643    235899999754 334457799999999999999999999998764 57899999999


Q ss_pred             CCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCC-------
Q 024659          137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-------  209 (264)
Q Consensus       137 ~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~-------  209 (264)
                      +++|.+++.. ....+++..++.++.|++.||.|+|+. +++||||||+|||+++++.+||+|||+++.....       
T Consensus       113 ~g~l~~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH~~-~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~  190 (311)
T d1r0pa_         113 HGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN  190 (311)
T ss_dssp             TCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTC
T ss_pred             cCchhhhhcc-ccccchHHHHHHHHHHHHHhhhhhccc-CcccCCccHHhEeECCCCCEEEecccchhhcccccccccee
Confidence            9999998864 455678889999999999999999999 9999999999999999999999999999865332       


Q ss_pred             -CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 -~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                       ....+|..|+|||.+....++.++||||||+++|||++|+.||....
T Consensus       191 ~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~  238 (311)
T d1r0pa_         191 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV  238 (311)
T ss_dssp             TTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC--
T ss_pred             cccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCC
Confidence             22356889999999999999999999999999999999888886544

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-44  Score=299.76  Aligned_cols=201  Identities=22%  Similarity=0.310  Sum_probs=168.2

Q ss_pred             CCccccccccCCCCCCCeEEEEEeCC--------CCEEEEEEeCCCCCh-hHHHHHHHHHHHhcC-CCCCccccceeeEe
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKLEN--------QFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCE  124 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~  124 (264)
                      +.+.|++++.||+|+||.||+|+...        +..||+|+++..... ....+.+|...+.++ +||||++++++|.+
T Consensus        11 ~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~   90 (299)
T d1fgka_          11 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ   90 (299)
T ss_dssp             CGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEeccccccc
Confidence            34678899999999999999998532        347999999876543 346788899999888 79999999999999


Q ss_pred             CCcceEEEecCCCCCHHHhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeC
Q 024659          125 GDERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD  190 (264)
Q Consensus       125 ~~~~~lv~e~~~~~sL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~  190 (264)
                      +...++||||+.+|+|.+++....              ...+++.+++.++.||+.||+|||+. +++||||||+|||++
T Consensus        91 ~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~-~ivHrDiKp~NiLl~  169 (299)
T d1fgka_          91 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVT  169 (299)
T ss_dssp             SSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEC
T ss_pred             CCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC-CEEeeeecccceeec
Confidence            999999999999999999996432              24589999999999999999999999 999999999999999


Q ss_pred             CCCCeEEcccCCCcccCCC------CcccccccccccccccCCCCCCccceechHHHHHHHHh-CCCCCCCCc
Q 024659          191 DDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHV  256 (264)
Q Consensus       191 ~~~~~kl~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~~~~~~~  256 (264)
                      .++.+||+|||+++.....      ....+++.|+|||.+.++.++.++||||||+++|||++ |.+||....
T Consensus       170 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~  242 (299)
T d1fgka_         170 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP  242 (299)
T ss_dssp             TTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             CCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCC
Confidence            9999999999998854332      23467889999999999999999999999999999998 577776544

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-46  Score=303.26  Aligned_cols=196  Identities=18%  Similarity=0.259  Sum_probs=167.4

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCCh------hHHHHHHHHHHHhcCC--CCCccccceeeEeCCc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLR--NRRLANLLGCCCEGDE  127 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~~i~~~~~~~~~~~~  127 (264)
                      +.|++.+.||+|+||+||+|++ .+++.||+|++......      ...++.+|+.++++++  ||||+++++++.+++.
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            3588888999999999999995 56899999998753211      1233568999999986  8999999999999999


Q ss_pred             ceEEEecCCC-CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC-CCCeEEcccCCCcc
Q 024659          128 RLLVAEYMPN-DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKN  205 (264)
Q Consensus       128 ~~lv~e~~~~-~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~-~~~~kl~dfg~~~~  205 (264)
                      .++||||+.+ +++.+++.  ....+++..++.++.||+.||.|||++ +++||||||+||+++. ++.+||+|||+++.
T Consensus        84 ~~lv~e~~~~~~~l~~~~~--~~~~l~e~~~~~~~~qi~~al~~lH~~-~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~  160 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGAL  160 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEEEEEeccCcchHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC-CCccccCcccceEEecCCCeEEECcccccee
Confidence            9999999975 57778776  345799999999999999999999999 9999999999999985 47999999999986


Q ss_pred             cCCC--CcccccccccccccccCCCC-CCccceechHHHHHHHHhCCCCCCCC
Q 024659          206 SRDG--RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       206 ~~~~--~~~~~~~~y~aPE~~~~~~~-~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                      ....  ....||+.|+|||++.+..+ +.++|||||||++|||++|+.||...
T Consensus       161 ~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~  213 (273)
T d1xwsa_         161 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD  213 (273)
T ss_dssp             CCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH
T ss_pred             cccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCc
Confidence            5433  34578999999999987775 66799999999999999999999754

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-45  Score=303.21  Aligned_cols=198  Identities=19%  Similarity=0.204  Sum_probs=164.7

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CC-CCEEEEEEeCCCCC--hhHHHHHHHHHHHhcC---CCCCccccceeeEe-----
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-EN-QFRIAVKRFNRSAW--PDARQFLEEARAVGQL---RNRRLANLLGCCCE-----  124 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~-~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~~i~~~~~~~~~-----  124 (264)
                      +.|+++++||+|+||+||+|.+ .+ ++.||+|+++....  .....+.+|+.+++.+   +||||+++++++..     
T Consensus         7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~   86 (305)
T d1blxa_           7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   86 (305)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred             CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccccc
Confidence            5689999999999999999996 34 66799999864321  1223455677766655   79999999999854     


Q ss_pred             CCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCc
Q 024659          125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (264)
Q Consensus       125 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~  204 (264)
                      ....++++||+.++.+.... ......+++..++.++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus        87 ~~~~~~~~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~qi~~aL~yLH~~-~ivHrDiKp~NILi~~~~~~kl~dfg~~~  164 (305)
T d1blxa_          87 ETKLTLVFEHVDQDLTTYLD-KVPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLAR  164 (305)
T ss_dssp             EEEEEEEEECCSCBHHHHHH-HSCTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred             CceEEEEEEeccCCchhhhh-hccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEEecCCCccEEEEcCCCCeeecchhhhh
Confidence            24578999999887554433 33566789999999999999999999999 99999999999999999999999999987


Q ss_pred             ccCC---CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          205 NSRD---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       205 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ....   .....||+.|+|||++.+..++.++||||+||++|||++|++||....
T Consensus       165 ~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~  219 (305)
T d1blxa_         165 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS  219 (305)
T ss_dssp             CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             hhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCC
Confidence            5433   234578999999999999999999999999999999999999997653

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-44  Score=302.58  Aligned_cols=195  Identities=19%  Similarity=0.231  Sum_probs=164.4

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC-hhHHHHHHHHHHHhcCCCCCccccceeeEeCCc----ceEE
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE----RLLV  131 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~----~~lv  131 (264)
                      .|+++++||+|+||+||+|.+ .+++.||+|++..... ...+.+.+|+++|++++||||+++++++.....    .+++
T Consensus         9 rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l   88 (345)
T d1pmea_           9 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYL   88 (345)
T ss_dssp             TEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred             CeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEE
Confidence            488999999999999999995 6799999999986543 335678899999999999999999999976532    3455


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC---
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---  208 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~---  208 (264)
                      ++|+.+++|.+++..   ..+++..++.++.|++.||.|||++ ||+||||||+|||++.++.+||+|||++.....   
T Consensus        89 ~~~~~~g~L~~~l~~---~~l~~~~i~~i~~qil~al~yLH~~-~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~  164 (345)
T d1pmea_          89 VTHLMGADLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD  164 (345)
T ss_dssp             EEECCCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGC
T ss_pred             EEeecCCchhhhhhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCcceEEECCCCCEEEcccCceeeccCCCc
Confidence            666778999999953   4699999999999999999999999 999999999999999999999999999875432   


Q ss_pred             ----CCcccccccccccccccC-CCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 ----GRSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 ----~~~~~~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                          .....+++.|+|||++.. ..++.++||||+||+++||++|+.||....
T Consensus       165 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~  217 (345)
T d1pmea_         165 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH  217 (345)
T ss_dssp             BCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             cceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCC
Confidence                233467899999999854 457899999999999999999999997654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-44  Score=299.53  Aligned_cols=188  Identities=17%  Similarity=0.211  Sum_probs=157.4

Q ss_pred             cccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHH--HHHHHHHhcCCCCCccccceeeEeCC----cceEE
Q 024659           58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQF--LEEARAVGQLRNRRLANLLGCCCEGD----ERLLV  131 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~--~~e~~~l~~l~h~~i~~~~~~~~~~~----~~~lv  131 (264)
                      ++.+.++||+|+||.||+|+++ |+.||+|+++...   .+.+  ..|+..+.+++||||+++++++.+.+    ..++|
T Consensus         4 ~~~l~~~iG~G~fg~Vy~~~~~-g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv   79 (303)
T d1vjya_           4 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV   79 (303)
T ss_dssp             GEEEEEEEECCSSSEEEEEEET-TEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred             EEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEE
Confidence            3566678899999999999974 6699999997543   2333  34555566789999999999998654    47899


Q ss_pred             EecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc--------CCCceeeccCCCCeeeCCCCCeEEcccCCC
Q 024659          132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS--------KERALYHDLNAYRIVFDDDVNPRLSCFGLM  203 (264)
Q Consensus       132 ~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~--------~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~  203 (264)
                      |||+++|+|.+++++   ..+++..++.++.|++.||.|+|+        + +|+||||||+|||++.++.+||+|||++
T Consensus        80 ~Ey~~~g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~-~IvHrDlKp~NILl~~~~~~Kl~DFGl~  155 (303)
T d1vjya_          80 SDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLA  155 (303)
T ss_dssp             EECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC-EEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EecccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCC-CeeccccCccceEEcCCCCeEEEecCcc
Confidence            999999999999964   368999999999999999999996        5 8999999999999999999999999998


Q ss_pred             cccCCC--------CcccccccccccccccCCC------CCCccceechHHHHHHHHhCCCCCC
Q 024659          204 KNSRDG--------RSYSTNLAFTPPEYLRTGR------VTPESVMYSFGTLLLDLLSGKHIPP  253 (264)
Q Consensus       204 ~~~~~~--------~~~~~~~~y~aPE~~~~~~------~~~~~DiwslG~~l~el~~g~~~~~  253 (264)
                      +.....        ....+|+.|+|||++.+..      ++.++|||||||++|||+||.+||.
T Consensus       156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~  219 (303)
T d1vjya_         156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG  219 (303)
T ss_dssp             EEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTT
T ss_pred             ccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCC
Confidence            865332        2356899999999987643      5778999999999999999988774

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-44  Score=301.42  Aligned_cols=195  Identities=17%  Similarity=0.259  Sum_probs=164.1

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCC------c
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGD------E  127 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------~  127 (264)
                      +.|+++++||+|+||+||+|.+ .+++.||+|+++....  ...+.+.+|+++|++++||||+++++++...+      .
T Consensus        18 ~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~   97 (346)
T d1cm8a_          18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD   97 (346)
T ss_dssp             SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred             CcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccce
Confidence            4588999999999999999995 5689999999986432  23457889999999999999999999997654      4


Q ss_pred             ceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      +++||||+ +.+|..+..   ...+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+|++|||+++...
T Consensus        98 ~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~-~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~  172 (346)
T d1cm8a_          98 FYLVMPFM-GTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAA-GIIHRDLKPGNLAVNEDCELKILDFGLARQAD  172 (346)
T ss_dssp             CEEEEECC-SEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEEecc-cccHHHHHH---hccccHHHHHHHHHHHHHHHHHHHhC-CCcccccCcchhhcccccccccccccceeccC
Confidence            69999999 567888774   34699999999999999999999999 99999999999999999999999999998765


Q ss_pred             CC-CcccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          208 DG-RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       208 ~~-~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .. ....+|+.|+|||.+.+.. ++.++||||+||++|+|++|++||....
T Consensus       173 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~  223 (346)
T d1cm8a_         173 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD  223 (346)
T ss_dssp             SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             CccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCC
Confidence            43 3457899999999997654 7899999999999999999999997653

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.8e-44  Score=297.20  Aligned_cols=198  Identities=17%  Similarity=0.216  Sum_probs=165.9

Q ss_pred             CccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEe--------
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE--------  124 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------  124 (264)
                      .+.|+++++||+|+||+||+|++ .+|+.||||++.....  ....++.+|+++|++++|+||+++++++..        
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            46789999999999999999995 5789999999875432  234668899999999999999999999855        


Q ss_pred             CCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCc
Q 024659          125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK  204 (264)
Q Consensus       125 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~  204 (264)
                      ....+++|||+.++.+.....  ....++...++.++.|++.||.|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~~--~~~~~~~~~~~~i~~qil~~l~~lH~~-~ivHrDlKp~NILl~~~~~~kl~dfg~~~  165 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLITRDGVLKLADFGLAR  165 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHTC--TTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             CceEEEEEeccCCCccchhhh--cccccccHHHHHHHHHHHHHHHHhccC-CEEecCcCchheeecCCCcEEeeecceee
Confidence            345789999998875554432  456789999999999999999999999 99999999999999999999999999997


Q ss_pred             ccCC--------CCcccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          205 NSRD--------GRSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       205 ~~~~--------~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ....        .....+|+.|+|||++.+. .+++++|||||||++|||++|+.||.+..
T Consensus       166 ~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~  226 (318)
T d3blha1         166 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT  226 (318)
T ss_dssp             ECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             ecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCC
Confidence            5432        2234689999999999765 58999999999999999999999997543

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-44  Score=297.34  Aligned_cols=198  Identities=22%  Similarity=0.318  Sum_probs=170.8

Q ss_pred             ccccccccCCCCCCCeEEEEEe------CCCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcC-CCCCccccceeeEeCCcc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGDER  128 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~  128 (264)
                      +++++.+.||+|+||.||+|++      .+++.||+|+++..... ....+.+|+.++.++ +||||+++++++.+....
T Consensus        23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~  102 (311)
T d1t46a_          23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT  102 (311)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEE
Confidence            5678888999999999999985      34678999999875433 345688999999999 699999999999999999


Q ss_pred             eEEEecCCCCCHHHhhhcCC----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWE----------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD  192 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~----------------~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~  192 (264)
                      ++||||+++++|.+++....                ...+++..+..++.||+.||+|||++ +++||||||+||+++.+
T Consensus       103 ~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~-~ivHrDLKp~NIl~~~~  181 (311)
T d1t46a_         103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNILLTHG  181 (311)
T ss_dssp             EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEETT
T ss_pred             EEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-Ceeeccccccccccccc
Confidence            99999999999999986432                22588999999999999999999999 99999999999999999


Q ss_pred             CCeEEcccCCCcccCCCC------cccccccccccccccCCCCCCccceechHHHHHHHHhC-CCCCCCC
Q 024659          193 VNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG-KHIPPSH  255 (264)
Q Consensus       193 ~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g-~~~~~~~  255 (264)
                      +.++++|||+++......      ...+|+.|+|||++.+..++.++||||||+++|||+|+ .++|...
T Consensus       182 ~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~  251 (311)
T d1t46a_         182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM  251 (311)
T ss_dssp             TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             CcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCC
Confidence            999999999998654432      23568899999999999999999999999999999995 4545443

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-44  Score=295.88  Aligned_cols=198  Identities=22%  Similarity=0.346  Sum_probs=170.5

Q ss_pred             CCccccccccCCCCCCCeEEEEEeC------CCCEEEEEEeCCCCCh-hHHHHHHHHHHHhcCCCCCccccceeeEeCCc
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDE  127 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~  127 (264)
                      ..+.+++.++||+|+||.||+|.+.      ++..||||+++..... ....+.+|++++++++||||+++++++...+.
T Consensus        18 ~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~   97 (308)
T d1p4oa_          18 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   97 (308)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS
T ss_pred             cHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCc
Confidence            3456788899999999999999863      2578999999865433 34468899999999999999999999998899


Q ss_pred             ceEEEecCCCCCHHHhhhcC--------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcc
Q 024659          128 RLLVAEYMPNDTLAKHLFHW--------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSC  199 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~--------~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~d  199 (264)
                      .++||||+++|+|.+++...        ....+++..+..++.|++.||.|||++ +++||||||+|||+++++.+||+|
T Consensus        98 ~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~-~ivHrDlk~~NiLld~~~~~Kl~D  176 (308)
T d1p4oa_          98 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGD  176 (308)
T ss_dssp             CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCSGGGEEECTTCCEEECC
T ss_pred             eeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC-CeeeceEcCCceeecCCceEEEee
Confidence            99999999999999988532        223578899999999999999999999 999999999999999999999999


Q ss_pred             cCCCcccCCC------CcccccccccccccccCCCCCCccceechHHHHHHHHhCC-CCCC
Q 024659          200 FGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK-HIPP  253 (264)
Q Consensus       200 fg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~-~~~~  253 (264)
                      ||+++.....      ....+++.|+|||.+.+..++.++||||||+++|||+||. +||.
T Consensus       177 FGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~  237 (308)
T d1p4oa_         177 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ  237 (308)
T ss_dssp             TTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTT
T ss_pred             cccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCC
Confidence            9999855332      2235689999999999999999999999999999999996 4454

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-43  Score=290.02  Aligned_cols=196  Identities=18%  Similarity=0.214  Sum_probs=172.5

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeCCcceEEEe
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE  133 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  133 (264)
                      +.|+++++||+|+||+||+|++ .+++.||+|+++....  .....+.+|+.++++++|+||+++++++.+....+++++
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            4689999999999999999995 5789999999965432  335678999999999999999999999999999999999


Q ss_pred             cCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCCCC---
Q 024659          134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---  210 (264)
Q Consensus       134 ~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~~~---  210 (264)
                      ++.+++|..++.  ..+.+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.++......   
T Consensus        82 ~~~~~~l~~~~~--~~~~~~~~~~~~~~~q~~~aL~~lH~~-~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~  158 (292)
T d1unla_          82 FCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSR-NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY  158 (292)
T ss_dssp             CCSEEHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCC
T ss_pred             eccccccccccc--cccccchhHHHHHHHHHHHHHHHhhcC-CEeeecccCcccccccCCceeeeecchhhcccCCCccc
Confidence            999988887775  556789999999999999999999999 99999999999999999999999999998654432   


Q ss_pred             -cccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCC
Q 024659          211 -SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       211 -~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                       ...++..|+|||.+.+.. ++.++|||||||+++||++|+.||...
T Consensus       159 ~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~  205 (292)
T d1unla_         159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG  205 (292)
T ss_dssp             CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCC
T ss_pred             eeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCC
Confidence             335678899999987665 689999999999999999999987543

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=2.5e-43  Score=290.68  Aligned_cols=193  Identities=18%  Similarity=0.182  Sum_probs=167.7

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCC-CCccccceeeEeCCcceEEEecC
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN-RRLANLLGCCCEGDERLLVAEYM  135 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~  135 (264)
                      .|++++.||+|+||+||+|++ .+++.||+|.+....  ....+.+|++.++.++| +|++.+++++......++||||+
T Consensus         6 ~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~   83 (293)
T d1csna_           6 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL   83 (293)
T ss_dssp             TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred             ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec
Confidence            478889999999999999995 568899999986543  22346788999999975 89999999999999999999998


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCC-----CCCeEEcccCCCcccCC--
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-----DVNPRLSCFGLMKNSRD--  208 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~-----~~~~kl~dfg~~~~~~~--  208 (264)
                       +++|.+++.. ....++..++..++.|++.||+|||++ |++||||||+||+++.     ++.+||+|||+++....  
T Consensus        84 -~~~l~~~~~~-~~~~~~~~~~~~i~~q~~~~l~~lH~~-giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~  160 (293)
T d1csna_          84 -GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV  160 (293)
T ss_dssp             -CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred             -CCCHHHHHHh-hccchhhHHHHHHHHHHHHHHHHHHHC-CceeccCCccceeecCcccccCCceEEcccceeEEcccCc
Confidence             6789998864 456799999999999999999999999 9999999999999974     57899999999986432  


Q ss_pred             ---------CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCC
Q 024659          209 ---------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH  255 (264)
Q Consensus       209 ---------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~  255 (264)
                               .....||+.|+|||++.+..+++++||||||+++|||++|+.||...
T Consensus       161 ~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~  216 (293)
T d1csna_         161 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL  216 (293)
T ss_dssp             TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             cccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCc
Confidence                     22346899999999999999999999999999999999999999754

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-43  Score=299.60  Aligned_cols=193  Identities=21%  Similarity=0.222  Sum_probs=161.4

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCccccceeeEeC------CcceE
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG------DERLL  130 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~~l  130 (264)
                      +|+.++.||+|+||+||+|++ .+++.||+|++.....    ...+|++++++++|+||+++++++...      .+.++
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l   96 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL   96 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence            477788899999999999996 5689999999976542    234799999999999999999998643      24689


Q ss_pred             EEecCCCCCHHHhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC-CeEEcccCCCcccC
Q 024659          131 VAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSR  207 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~-~~kl~dfg~~~~~~  207 (264)
                      ||||++++ +.+.+..  .....+++..++.++.||+.||.|||++ ||+||||||+|||++.++ .+||+|||++....
T Consensus        97 v~Ey~~~~-~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~-~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~  174 (350)
T d1q5ka_          97 VLDYVPET-VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV  174 (350)
T ss_dssp             EEECCSEE-HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECTTTCCEEECCCTTCEECC
T ss_pred             EEeccCCc-cHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc-CCcccCCCcceEEEecCCCceeEecccchhhcc
Confidence            99999776 4433321  1456799999999999999999999999 999999999999999764 89999999998654


Q ss_pred             C---CCcccccccccccccccCC-CCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          208 D---GRSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       208 ~---~~~~~~~~~y~aPE~~~~~-~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      .   .....++..|+|||.+.+. .++.++||||+||++|||++|++||....
T Consensus       175 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~  227 (350)
T d1q5ka_         175 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS  227 (350)
T ss_dssp             TTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSS
T ss_pred             CCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCC
Confidence            3   3345788999999988754 58999999999999999999999997553

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=3.2e-43  Score=294.68  Aligned_cols=194  Identities=19%  Similarity=0.204  Sum_probs=168.5

Q ss_pred             CCccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC-CCCccccceeeEeC--CcceE
Q 024659           55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEG--DERLL  130 (264)
Q Consensus        55 ~~~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~--~~~~l  130 (264)
                      +.++|+++++||+|+||+||+|++ .+++.||+|+++...   .+++.+|+++|+++. ||||+++++++...  ...++
T Consensus        33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~  109 (328)
T d3bqca1          33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL  109 (328)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEE
T ss_pred             CCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH---HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeE
Confidence            446799999999999999999995 678999999997643   466889999999995 99999999998754  46899


Q ss_pred             EEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCC-CCeEEcccCCCcccCCC
Q 024659          131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSRDG  209 (264)
Q Consensus       131 v~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~-~~~kl~dfg~~~~~~~~  209 (264)
                      ||||+.+++|....     +.+++..++.++.||+.||.|||++ ||+||||||+|||++.+ +.+||+|||+++.....
T Consensus       110 v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~-gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~  183 (328)
T d3bqca1         110 VFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG  183 (328)
T ss_dssp             EEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTTEEEECCGGGCEECCTT
T ss_pred             EEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhc-ccccccccccceEEcCCCCeeeecccccceeccCC
Confidence            99999999987754     3589999999999999999999999 99999999999999865 46999999999865433


Q ss_pred             ---CcccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCCcc
Q 024659          210 ---RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHVS  257 (264)
Q Consensus       210 ---~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~~~  257 (264)
                         ....+|..|+|||.+.+.. ++.++||||+||+++||++|+.||....+
T Consensus       184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~  235 (328)
T d3bqca1         184 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHD  235 (328)
T ss_dssp             CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSS
T ss_pred             CcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCch
Confidence               3456789999999988765 79999999999999999999999976543

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.8e-44  Score=297.08  Aligned_cols=198  Identities=18%  Similarity=0.207  Sum_probs=170.6

Q ss_pred             CccccccccCCCCCCCeEEEEEeC----CCCEEEEEEeCCCC----ChhHHHHHHHHHHHhcCCC-CCccccceeeEeCC
Q 024659           56 FAMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRN-RRLANLLGCCCEGD  126 (264)
Q Consensus        56 ~~~~~~l~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~  126 (264)
                      .++|++++.||+|+||+||+|...    +|+.||+|.++...    ....+.+.+|++++++++| |||+++++++.+..
T Consensus        23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~  102 (322)
T d1vzoa_          23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  102 (322)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC
Confidence            456899999999999999999852    47899999997532    1234567889999999976 89999999999999


Q ss_pred             cceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCccc
Q 024659          127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (264)
Q Consensus       127 ~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~  206 (264)
                      ..++++||+.+++|.+++.  ....+++..+..++.||+.||.|+|++ +++||||||+||+++.++.+||+|||+++..
T Consensus       103 ~~~~v~e~~~~~~L~~~i~--~~~~~~e~~~~~~~~Qi~~al~~lH~~-~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~  179 (322)
T d1vzoa_         103 KLHLILDYINGGELFTHLS--QRERFTEHEVQIYVGEIVLALEHLHKL-GIIYRDIKLENILLDSNGHVVLTDFGLSKEF  179 (322)
T ss_dssp             EEEEEECCCCSCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred             ceeeeeecccccHHHHHHH--hcccccHHHHHHHHHHHHHHHHHhhcC-CEEeccCCccceeecCCCCEEEeeccchhhh
Confidence            9999999999999999986  344678889999999999999999999 9999999999999999999999999998754


Q ss_pred             CC-----CCcccccccccccccccCCC--CCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          207 RD-----GRSYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       207 ~~-----~~~~~~~~~y~aPE~~~~~~--~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ..     .....+++.|+|||.+.+..  ++.++|||||||+||||++|+.||....
T Consensus       180 ~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~  236 (322)
T d1vzoa_         180 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDG  236 (322)
T ss_dssp             CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTT
T ss_pred             cccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence            32     23456789999999997654  7889999999999999999999997553

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8e-43  Score=294.53  Aligned_cols=196  Identities=18%  Similarity=0.259  Sum_probs=165.8

Q ss_pred             ccccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEeC-----Ccc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG-----DER  128 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~  128 (264)
                      +.|+++++||+|+||+||+|++ .+|+.||+|++.....  ...+.+.+|+++|++++|+||+++++++...     ...
T Consensus        18 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~   97 (348)
T d2gfsa1          18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND   97 (348)
T ss_dssp             TTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCC
T ss_pred             CCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCce
Confidence            3589999999999999999995 5799999999986542  3345688999999999999999999998643     234


Q ss_pred             eEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccCC
Q 024659          129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD  208 (264)
Q Consensus       129 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~~  208 (264)
                      +++++|+.+++|.+++.   .+.+++..++.++.||+.||.|||++ ||+||||||+||+++.++.+|++|||++.....
T Consensus        98 ~~i~~~~~gg~L~~~~~---~~~l~e~~~~~i~~qil~aL~~LH~~-giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~  173 (348)
T d2gfsa1          98 VYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD  173 (348)
T ss_dssp             CEEEEECCSEEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCC----CCTG
T ss_pred             EEEEEeecCCchhhhcc---cccccHHHHHHHHHHHHHHHHHHHhC-CCcccccCCccccccccccccccccchhcccCc
Confidence            66778888999999984   45699999999999999999999999 999999999999999999999999999876543


Q ss_pred             -CCcccccccccccccccCCC-CCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          209 -GRSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       209 -~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                       .....++..|+|||...+.. ++.++|||||||++|+|++|++||.+..
T Consensus       174 ~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~  223 (348)
T d2gfsa1         174 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD  223 (348)
T ss_dssp             GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCC
Confidence             34456789999999887665 6889999999999999999999997654

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.5e-42  Score=286.99  Aligned_cols=194  Identities=16%  Similarity=0.128  Sum_probs=162.8

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCcccc-ceeeEeCCcceEEEecC
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANL-LGCCCEGDERLLVAEYM  135 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~-~~~~~~~~~~~lv~e~~  135 (264)
                      .|+++++||+|+||.||+|++ .+++.||+|.+.....  ..++..|+++++.++|++++.. ..++.+.+..++||||+
T Consensus         8 rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~   85 (299)
T d1ckia_           8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   85 (299)
T ss_dssp             TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             EEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc
Confidence            488999999999999999995 5688999999876542  2357789999999987765555 55556677889999998


Q ss_pred             CCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeC---CCCCeEEcccCCCcccCCC---
Q 024659          136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDG---  209 (264)
Q Consensus       136 ~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~---~~~~~kl~dfg~~~~~~~~---  209 (264)
                      . +++.+.+.. ....+++..+..++.|++.||+|||++ ||+||||||+||+++   .+..++|+|||+++.....   
T Consensus        86 ~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~  162 (299)
T d1ckia_          86 G-PSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH  162 (299)
T ss_dssp             C-CBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTC
T ss_pred             C-Cchhhhhhh-ccCCCcHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHhhccccccCCCceeeeeccCcceeccccccc
Confidence            5 467776643 556799999999999999999999999 999999999999986   3567999999999865432   


Q ss_pred             --------CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          210 --------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       210 --------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                              ....||+.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus       163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~  217 (299)
T d1ckia_         163 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLK  217 (299)
T ss_dssp             CBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC
T ss_pred             cceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccc
Confidence                    23468999999999999899999999999999999999999997543

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-42  Score=291.53  Aligned_cols=194  Identities=16%  Similarity=0.208  Sum_probs=159.7

Q ss_pred             ccccccccCCCCCCCeEEEEEeC-CCCEEEEEEeCCCCC--hhHHHHHHHHHHHhcCCCCCccccceeeEe------CCc
Q 024659           57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE------GDE  127 (264)
Q Consensus        57 ~~~~~l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~~  127 (264)
                      ..|++++.||+|+||+||+|.+. +|+.||+|++.....  ....++.+|+.++++++||||+++++++..      ..+
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            46899999999999999999964 689999999986532  234568899999999999999999999864      357


Q ss_pred             ceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCCCcccC
Q 024659          128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR  207 (264)
Q Consensus       128 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~~  207 (264)
                      .++||||+.++ +.+.+.    ..+++..++.++.||+.||.|||++ ||+||||||+||+++.++.++++|||+++...
T Consensus        97 ~~iv~Ey~~~~-l~~~~~----~~~~~~~i~~~~~qil~gl~~LH~~-giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~  170 (355)
T d2b1pa1          97 VYLVMELMDAN-LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  170 (355)
T ss_dssp             EEEEEECCSEE-HHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred             eEEEEeccchH-HHHhhh----cCCCHHHHHHHHHHHHHHHHHhhhc-ccccccCCccccccccccceeeechhhhhccc
Confidence            89999999775 444442    3589999999999999999999999 99999999999999999999999999977544


Q ss_pred             CC---CcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          208 DG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       208 ~~---~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ..   ....+|+.|+|||++.+..+++++||||+||++++|++|+.||....
T Consensus       171 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~  222 (355)
T d2b1pa1         171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD  222 (355)
T ss_dssp             ----------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             cccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCC
Confidence            32   34467899999999999899999999999999999999999997654

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=8.8e-37  Score=258.56  Aligned_cols=198  Identities=12%  Similarity=0.122  Sum_probs=158.3

Q ss_pred             cccccccCCCCCCCeEEEEEe-CCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC-----------CCCccccceeeEeC
Q 024659           58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-----------NRRLANLLGCCCEG  125 (264)
Q Consensus        58 ~~~~l~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~~i~~~~~~~~~~  125 (264)
                      .|+++++||+|+||+||+|+. .+|+.||+|+++... ...+.+.+|+.+++.+.           |+||+++++++...
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            489999999999999999995 678999999998654 23456778898888875           47899999988653


Q ss_pred             --CcceEEEecCCCC-CHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCC------CeE
Q 024659          126 --DERLLVAEYMPND-TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV------NPR  196 (264)
Q Consensus       126 --~~~~lv~e~~~~~-sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~------~~k  196 (264)
                        ....+++++...+ .............+++..+..++.||+.||.|||+..||+||||||+|||++.++      .++
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~k  172 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIK  172 (362)
T ss_dssp             ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEE
T ss_pred             cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceee
Confidence              4455666655443 3444444445667899999999999999999999832999999999999998654      399


Q ss_pred             EcccCCCcccCC-CCcccccccccccccccCCCCCCccceechHHHHHHHHhCCCCCCCCc
Q 024659          197 LSCFGLMKNSRD-GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHV  256 (264)
Q Consensus       197 l~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~~~~~~~  256 (264)
                      ++|||.+..... .....+|+.|+|||++....++.++||||+||++++|++|+.||....
T Consensus       173 l~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~  233 (362)
T d1q8ya_         173 IADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDE  233 (362)
T ss_dssp             ECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC----
T ss_pred             EeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCc
Confidence            999999875543 344578999999999999899999999999999999999999997543

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.92  E-value=3.6e-26  Score=176.00  Aligned_cols=162  Identities=15%  Similarity=0.081  Sum_probs=118.2

Q ss_pred             ccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCCh------------------hHHHHHHHHHHHhcCCCCCccccceee
Q 024659           61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP------------------DARQFLEEARAVGQLRNRRLANLLGCC  122 (264)
Q Consensus        61 ~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------------~~~~~~~e~~~l~~l~h~~i~~~~~~~  122 (264)
                      +-++||+|+||.||+|.+.+|+.||+|.++.....                  ......+|...+.++.|.+++..+++.
T Consensus         4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~   83 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE   83 (191)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred             hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence            44578999999999999888999999987642110                  012345688899999999988877653


Q ss_pred             EeCCcceEEEecCCCCCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCceeeccCCCCeeeCCCCCeEEcccCC
Q 024659          123 CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL  202 (264)
Q Consensus       123 ~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~~~~i~H~dl~~~Nil~~~~~~~kl~dfg~  202 (264)
                          ..+++|||+++..+.+         ++......++.|++.++.+||+. |++||||||+||++++++ ++|+|||+
T Consensus        84 ----~~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~-giiHrDiKP~NILv~~~~-~~liDFG~  148 (191)
T d1zara2          84 ----GNAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHR-GIVHGDLSQYNVLVSEEG-IWIIDFPQ  148 (191)
T ss_dssp             ----TTEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEEEETTE-EEECCCTT
T ss_pred             ----CCEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhC-CEEEccCChhheeeeCCC-EEEEECCC
Confidence                2479999998865543         22334567899999999999999 999999999999999654 89999999


Q ss_pred             CcccCCCCccccccccccc------ccccCCCCCCccceechHHHH
Q 024659          203 MKNSRDGRSYSTNLAFTPP------EYLRTGRVTPESVMYSFGTLL  242 (264)
Q Consensus       203 ~~~~~~~~~~~~~~~y~aP------E~~~~~~~~~~~DiwslG~~l  242 (264)
                      +.....+...    .|...      +. ....|+.++|+||+.--+
T Consensus       149 a~~~~~~~~~----~~l~rd~~~~~~~-f~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         149 SVEVGEEGWR----EILERDVRNIITY-FSRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             CEETTSTTHH----HHHHHHHHHHHHH-HHHHHCCCCCHHHHHHHH
T ss_pred             cccCCCCCcH----HHHHHHHHHHHHH-HcCCCCCcccHHHHHHHH
Confidence            8765433221    11111      11 124578889999986544

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.88  E-value=3.7e-09  Score=83.40  Aligned_cols=139  Identities=14%  Similarity=0.023  Sum_probs=91.3

Q ss_pred             ccccccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCC-CCCccccceeeEeCCcceEEEecCCC
Q 024659           59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMPN  137 (264)
Q Consensus        59 ~~~l~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~  137 (264)
                      +++++..+.++.+.||+...+++ .+++|+...........+.+|...+..+. +--+.+++.+...++..++||++++|
T Consensus        16 ~~~~~~~~G~s~~~v~rv~~~~~-~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G   94 (263)
T d1j7la_          16 YRCVKDTEGMSPAKVYKLVGENE-NLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADG   94 (263)
T ss_dssp             SEEEECSCCCSSSEEEEEECSSC-EEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSS
T ss_pred             eEEEEcCCCCCCCcEEEEEeCCC-eEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccc
Confidence            34555545555678998875444 67788876554344445677888877774 33356777777788889999999999


Q ss_pred             CCHHHhhhcCCCCCCCHHHHHHHHHHHHHHHHHHhc--------------------------------------------
Q 024659          138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS--------------------------------------------  173 (264)
Q Consensus       138 ~sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lh~--------------------------------------------  173 (264)
                      .++.+....    ...   ...++.+++..+..||+                                            
T Consensus        95 ~~~~~~~~~----~~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (263)
T d1j7la_          95 VLCSEEYED----EQS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDP  167 (263)
T ss_dssp             EEHHHHTTT----CSC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSH
T ss_pred             ccccccccc----ccc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHH
Confidence            887654421    011   11223333333333332                                            


Q ss_pred             ---------C-----CCceeeccCCCCeeeCCCCCeEEcccCCCcc
Q 024659          174 ---------K-----ERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (264)
Q Consensus       174 ---------~-----~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~  205 (264)
                               .     ..++|+|+.|.||++++++..-|+||+.+..
T Consensus       168 ~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         168 RELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             HHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence                     0     1378999999999999877778999998764

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.38  E-value=1e-06  Score=68.53  Aligned_cols=68  Identities=19%  Similarity=0.187  Sum_probs=49.5

Q ss_pred             CeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCC--CCccccceeeEeCCcceEEEecCCCCCHH
Q 024659           71 NVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN--RRLANLLGCCCEGDERLLVAEYMPNDTLA  141 (264)
Q Consensus        71 g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e~~~~~sL~  141 (264)
                      +.||+....++..+++|........   .+..|+..++.+..  -.+.+++.+..+++..+++|++++|.++.
T Consensus        25 ~~v~r~~~~~~~~~vlK~~~~~~~~---~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~   94 (255)
T d1nd4a_          25 AAVFRLSAQGRPVLFVKTDLSGALN---ELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL   94 (255)
T ss_dssp             CEEEEEECTTSCCEEEEEECSCTTS---CHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             CeEEEEEeCCCCEEEEEeCCccCHh---HHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccccc
Confidence            6799999888888899987765433   35567777766643  23566777777777889999999886553

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=98.29  E-value=2.3e-06  Score=71.19  Aligned_cols=76  Identities=13%  Similarity=0.135  Sum_probs=48.7

Q ss_pred             cccCCCCCCCeEEEEEeC-CCCEEEEEEeCC------CCC-hhHHHHHHHHHHHhcCC-C--CCccccceeeEeCCcceE
Q 024659           62 VSEHGEKAPNVVYKGKLE-NQFRIAVKRFNR------SAW-PDARQFLEEARAVGQLR-N--RRLANLLGCCCEGDERLL  130 (264)
Q Consensus        62 l~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~------~~~-~~~~~~~~e~~~l~~l~-h--~~i~~~~~~~~~~~~~~l  130 (264)
                      ++++|.|....||++... +++.+++|.-.+      ..+ ....+...|++.|+.+. +  ..+.+++.+  ++...++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence            457899999999999864 467899997543      111 12344566888877663 2  234444443  5667789


Q ss_pred             EEecCCCCC
Q 024659          131 VAEYMPNDT  139 (264)
Q Consensus       131 v~e~~~~~s  139 (264)
                      |||++.+..
T Consensus       109 vmE~L~~~~  117 (392)
T d2pula1         109 VMEDLSHLK  117 (392)
T ss_dssp             EECCCTTSE
T ss_pred             EEeccCCcc
Confidence            999997644

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=97.76  E-value=8.6e-05  Score=59.71  Aligned_cols=134  Identities=21%  Similarity=0.170  Sum_probs=77.7

Q ss_pred             CCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCcc--ccc-----eeeEeCCcceEEEecCCCCCHH-
Q 024659           70 PNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLA--NLL-----GCCCEGDERLLVAEYMPNDTLA-  141 (264)
Q Consensus        70 ~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~--~~~-----~~~~~~~~~~lv~e~~~~~sL~-  141 (264)
                      -..||++..++|..+++|..++... ..+++..|...+..|...++.  ...     .........+.++++++|..+. 
T Consensus        35 EN~vy~v~~~dg~~~VlK~~rp~~~-s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~~  113 (325)
T d1zyla1          35 ENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEA  113 (325)
T ss_dssp             SSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECCS
T ss_pred             cceeEEEEcCCCCEEEEEEeCCCCC-CHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCCC
Confidence            3689999999999999999876543 345677788888777533221  111     1123345577889988763221 


Q ss_pred             ----Hh------h-------hcC--C-CCCCCH----------------------HHHHHHHHHHHHHHHHHh-c--CCC
Q 024659          142 ----KH------L-------FHW--E-TQPMKW----------------------AMRLRVALHIAEALEYCT-S--KER  176 (264)
Q Consensus       142 ----~~------l-------~~~--~-~~~~~~----------------------~~~~~i~~qi~~~l~~lh-~--~~~  176 (264)
                          .+      +       ...  . ....+.                      ......+.++...+...- +  ..+
T Consensus       114 ~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~~  193 (325)
T d1zyla1         114 DNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVL  193 (325)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCE
T ss_pred             CCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCce
Confidence                10      0       000  0 011111                      112223334443333221 1  136


Q ss_pred             ceeeccCCCCeeeCCCCCeEEcccCCCccc
Q 024659          177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNS  206 (264)
Q Consensus       177 i~H~dl~~~Nil~~~~~~~kl~dfg~~~~~  206 (264)
                      ++|+|+.+.||+++++  ..++||+-+...
T Consensus       194 liHgDlh~~NvL~~~~--~~~IDFdd~~~g  221 (325)
T d1zyla1         194 RLHGDCHAGNILWRDG--PMFVDLDDARNG  221 (325)
T ss_dssp             ECCSSCSGGGEEESSS--EEECCCTTCCEE
T ss_pred             eecCCCCcccEEEeCC--ceEEechhcccC
Confidence            8999999999999743  458999988753

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.41  E-value=0.0002  Score=59.11  Aligned_cols=74  Identities=18%  Similarity=0.311  Sum_probs=49.3

Q ss_pred             ccccCCCCCCCeEEEEEeCC--------CCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCc-cccceeeEeCCcceEE
Q 024659           61 IVSEHGEKAPNVVYKGKLEN--------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL-ANLLGCCCEGDERLLV  131 (264)
Q Consensus        61 ~l~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-~~~~~~~~~~~~~~lv  131 (264)
                      -+++|+.|-...+|++...+        .+.|+++..-...  ......+|..+++.+...++ .++++++.    -++|
T Consensus        46 ~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~--~~idr~~E~~i~~~ls~~gl~Pkll~~~~----~g~I  119 (395)
T d1nw1a_          46 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFS----GGRL  119 (395)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEET----TEEE
T ss_pred             EEEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcc--hhhHHHHHHHHHHHHHhCCCCCeEEEEcC----CceE
Confidence            35678889999999998653        3567777765322  23445678888888853344 46666553    2689


Q ss_pred             EecCCCCCH
Q 024659          132 AEYMPNDTL  140 (264)
Q Consensus       132 ~e~~~~~sL  140 (264)
                      ++|+++.++
T Consensus       120 ~efi~g~~l  128 (395)
T d1nw1a_         120 EEYIPSRPL  128 (395)
T ss_dssp             ECCCCEEEC
T ss_pred             EEEeccccC
Confidence            999987543

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.32  E-value=0.00018  Score=57.32  Aligned_cols=159  Identities=13%  Similarity=0.040  Sum_probs=81.2

Q ss_pred             cCHHHHHHHhCCCcccccc--ccCCCCCCCeEEEEEeCCCCEEEEEEeCCCCChhHHHHHHHHHHHhcCCCCCc-----c
Q 024659           44 YSIETLRTATSGFAMENIV--SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL-----A  116 (264)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~l--~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~  116 (264)
                      .+.+|+......|+-.++.  +.|..|--.+.|+...++|+ +++|......  ....+..+++++..|...++     +
T Consensus         3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g~-yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~pi   79 (316)
T d2ppqa1           3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDP-LILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL   79 (316)
T ss_dssp             CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCC-EEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred             CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCCc-EEEEEcCCCC--CHHHHHHHHHHHHhhhhccccccccc
Confidence            4667777777777553333  33567777889999877774 7888886532  22334445666666533222     1


Q ss_pred             cc-ce--eeEeCCcceEEEecCCCCCHHH-----------hhh----cCC----C--CCCCHH-----------------
Q 024659          117 NL-LG--CCCEGDERLLVAEYMPNDTLAK-----------HLF----HWE----T--QPMKWA-----------------  155 (264)
Q Consensus       117 ~~-~~--~~~~~~~~~lv~e~~~~~sL~~-----------~l~----~~~----~--~~~~~~-----------------  155 (264)
                      .. -|  +.........++.++.+.....           .+.    ...    .  ......                 
T Consensus        80 ~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (316)
T d2ppqa1          80 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE  159 (316)
T ss_dssp             CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred             eecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcc
Confidence            11 11  0112333455566554432210           000    000    0  000000                 


Q ss_pred             -HHHHHHHHHHHHHHHHhcC---CCceeeccCCCCeeeCCCCCeEEcccCCCcc
Q 024659          156 -MRLRVALHIAEALEYCTSK---ERALYHDLNAYRIVFDDDVNPRLSCFGLMKN  205 (264)
Q Consensus       156 -~~~~i~~qi~~~l~~lh~~---~~i~H~dl~~~Nil~~~~~~~kl~dfg~~~~  205 (264)
                       .....+......+......   .|++|+|+.++||+++.+...-++||+.+..
T Consensus       160 ~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         160 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  213 (316)
T ss_dssp             TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             hhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEeccccccc
Confidence             0112222333333333221   3799999999999999888889999998763