Citrus Sinensis ID: 024661

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260----
Protein Sequence
METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLSMASRVYICIN
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccEEEEccccccccccEEEEEEcccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHcccccccEEEEcccEEcccEEEEEEccccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccccccccccEEEcccccEEEEEccccccccccccEEEEEEEcEEEEccc
Secondary Structure Prediction (SSPRO)
cccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccEEEEccccccccEcccEEEEccccEEEEEccEccccEccEEEEEcccHHHHHHHHHHHHHHHHHccccccccEEEEccccEcccccEEEEEEcccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccEEccccccccEEEcccccEEEEccccHHcccccccccEEEEEEEEEHHcc
Coil and Loop (DISEMBL)
metqriiefphknmdkrprkrprltwdvppplpppkvlpalycvqefgnggmpnyacssmfygaiprtgsppwrpddkdghyVFAIGENLTPRYRILskmgegtfgqVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLArhdiggtrcvqirnwfDYRNHICIVFEKLGPSLYDFLrknsyrsfPIDLVRELGRQLLESVAFMHELRLIhtdlkpeniLLVSAEyvkvpdykvpsprhafsFQTFLSMASRVYICIN
Flexible Loop (DISEMBL)
metqriiefphknmdkrprkrprltwdvppplpppkVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQrlarhdiggtrcvqirnWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIhtdlkpenILLVSAEYVKVPDYKVPSPRHAFSFQTFLSMASRVYICIN
Low Complexity Region (SEG)
METQRIIEFPHKNMDKRPRKRPRLTWDvppplpppkvlpALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLSMASRVYICIN
Disordered region (IsUnstruct)
***********************************KVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLSMASRVYICI*
Disordered Region (DISOPRED)
****R**********************************************MPNY*********************DKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLSMASRVYICIN
Disordered Region (DISEMBL)
METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLSMASRVYICIN
Disordered Region (DISPRO)
**TQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLSMASRVYICIN
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLSMASRVYICIN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	264	2.2.26 [Sep-21-2011]
P51566	467	Serine/threonine-protein	yes	no	0.916	0.518	0.777	1e-109
P51567	427	Serine/threonine-protein	no	no	0.897	0.555	0.681	1e-98
P51568	400	Serine/threonine-protein	no	no	0.791	0.522	0.628	9e-78
P49762	832	Serine/threonine-protein	no	no	0.625	0.198	0.481	1e-43
Q10156	690	Dual specificity protein	yes	no	0.583	0.223	0.490	7e-42
O35491	499	Dual specificity protein	yes	no	0.594	0.314	0.477	6e-40
O35493	481	Dual specificity protein	no	no	0.598	0.328	0.493	8e-40
P49760	499	Dual specificity protein	yes	no	0.594	0.314	0.477	9e-40
Q9HAZ1	481	Dual specificity protein	no	no	0.598	0.328	0.487	1e-39
P22518	483	Dual specificity protein	no	no	0.606	0.331	0.481	4e-39

>sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2

 Score =  395 bits (1016), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 192/247 (77%), Positives = 216/247 (87%), Gaps = 5/247 (2%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVL-----PALYCVQEFGNGGMPNY 55
           +ETQR +EFPH+ +DKRPRKRPRLTWD  PPL PP        P LY   EF +G +PN+
Sbjct: 17  LETQRNVEFPHRIVDKRPRKRPRLTWDAAPPLLPPPPPPTVFQPPLYYGPEFASGLVPNF 76

Query: 56  ACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNE 115
              +MFY  +PR GSPPWRPDDKDGHYVF +G+ LTPRY+ILSKMGEGTFGQV+ECFDN+
Sbjct: 77  VYPNMFYNGLPRQGSPPWRPDDKDGHYVFVVGDTLTPRYQILSKMGEGTFGQVLECFDNK 136

Query: 116 KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL 175
            KE+VAIK++RSINKYREAAMIEIDVLQRL RHD+GG+RCVQIRNWFDYRNHICIVFEKL
Sbjct: 137 NKEVVAIKVIRSINKYREAAMIEIDVLQRLTRHDVGGSRCVQIRNWFDYRNHICIVFEKL 196

Query: 176 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV 235
           GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA+MH+LRLIHTDLKPENILLVS+EY+K+
Sbjct: 197 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAYMHDLRLIHTDLKPENILLVSSEYIKI 256

Query: 236 PDYKVPS 242
           PDYK  S
Sbjct: 257 PDYKFLS 263

Activator of yeast transcription factor, STE12.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 2EC: .EC: 1

>sp|P51567|AFC2_ARATH Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana GN=AFC2 PE=1 SV=1

 Score =  359 bits (922), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 167/245 (68%), Positives = 200/245 (81%), Gaps = 8/245 (3%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGN------GGMPN 54
           ME +R+ EFPH +MD+RPRKR RL WDV P     +V   ++C QE GN       G P+
Sbjct: 1   MEMERVHEFPHTHMDRRPRKRARLGWDVLPQATKAQV--GMFCGQEIGNISSFASSGAPS 58

Query: 55  YACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDN 114
              SS+    + R GSPPWR DDKDGHY+F +G++LTPRY+I SKMGEGTFGQV+EC+D 
Sbjct: 59  DNSSSLCVKGVARNGSPPWREDDKDGHYIFELGDDLTPRYKIYSKMGEGTFGQVLECWDR 118

Query: 115 EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEK 174
           E+KE+VA+KIVR + KYREAAMIEI++LQ+L +HD GG RCVQIRNWFDYRNHICIVFEK
Sbjct: 119 ERKEMVAVKIVRGVKKYREAAMIEIEMLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEK 178

Query: 175 LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK 234
           LG SLYDFLRKN+YRSFPIDLVRE+G QLLE VAFMH+LR+IHTDLKPENILLVS++YVK
Sbjct: 179 LGSSLYDFLRKNNYRSFPIDLVREIGWQLLECVAFMHDLRMIHTDLKPENILLVSSDYVK 238

Query: 235 VPDYK 239
           +P+YK
Sbjct: 239 IPEYK 243

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P51568|AFC3_ARATH Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana GN=AFC3 PE=2 SV=2

 Score =  290 bits (741), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 144/229 (62%), Positives = 176/229 (76%), Gaps = 20/229 (8%)

Query: 12  KNMDK-RPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGS 70
           ++MDK R RKRPR+TWD  P  P  K       ++  G+ G               R  S
Sbjct: 7   ESMDKERVRKRPRMTWDEAPAEPEAKRA----VIKGHGSDG---------------RILS 47

Query: 71  PPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK 130
           PP R DD+DGHYVF++ +NLTPRY+ILSKMGEGTFG+V+EC+D + KE VAIKI+RSI K
Sbjct: 48  PPLRDDDRDGHYVFSLRDNLTPRYKILSKMGEGTFGRVLECWDRDTKEYVAIKIIRSIKK 107

Query: 131 YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRS 190
           YR+AAMIEIDVLQ+L + D G TRCVQ++NWFDYRNHICIVFEKLGPSL+DFL++N Y +
Sbjct: 108 YRDAAMIEIDVLQKLVKSDKGRTRCVQMKNWFDYRNHICIVFEKLGPSLFDFLKRNKYSA 167

Query: 191 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK 239
           FP+ LVR+ G QLLESVA+MHEL+L+HTDLKPENILLVS+E VK+PD K
Sbjct: 168 FPLALVRDFGCQLLESVAYMHELQLVHTDLKPENILLVSSENVKLPDNK 216

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P49762|DOA_DROME Serine/threonine-protein kinase Doa OS=Drosophila melanogaster GN=Doa PE=1 SV=2

 Score =  176 bits (447), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/166 (48%), Positives = 120/166 (72%), Gaps = 1/166 (0%)

Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
           DD DGH ++  G+ L  RY+I++ +GEGTFG+VV+  D E+   +A+KI++++ KYREAA
Sbjct: 461 DDADGHLIYHTGDILHHRYKIMATLGEGTFGRVVKVKDMERDYCMALKIIKNVEKYREAA 520

Query: 136 MIEIDVLQRLARHDIGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
            +EI+ L+++A+ D      CV++ +WFDY  H+CIVFE LG S++DFLR+N+Y  +P+D
Sbjct: 521 KLEINALEKIAQKDPHCDHLCVKMIDWFDYHGHMCIVFEMLGLSVFDFLRENNYEPYPLD 580

Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
            VR +  QL  SV F+H+ RL HTDLKPENIL V ++Y    ++K+
Sbjct: 581 QVRHMAYQLCYSVKFLHDNRLTHTDLKPENILFVDSDYTSHYNHKI 626

Negative regulator of the copia retrotransposon element of the white (w) gene. In the eye, it is required for normal pigmentation, photoreceptor cell development and for organization of interommatidial bristles. Also essential for embryonic segmentation and differentiation of the nervous system. Functions in the control of alternative splicing by phosphorylating the argine/serine-rich splicing factors, SR proteins.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q10156|LKH1_SCHPO Dual specificity protein kinase lkh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=lkh1 PE=1 SV=3

 Score =  171 bits (432), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 76/155 (49%), Positives = 107/155 (69%), Gaps = 1/155 (0%)

Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
           DD DGHY          RY ++  +G GTFG+V++C+D       AIK+ R+I KYREA+
Sbjct: 344 DDDDGHYKVVPNSKFANRYTVVRLLGHGTFGKVIQCYDQSTGRHCAIKVTRAIPKYREAS 403

Query: 136 MIEIDVLQRLARHD-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
           +IE+ VLQ +A  D     +C+Q+R++FDYR HICIV +  G S++DFL+ N+Y  FP+ 
Sbjct: 404 LIELRVLQTIAHSDPTNENKCIQLRDYFDYRKHICIVTDLFGWSVFDFLKNNNYIPFPLK 463

Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVS 229
            ++ L +QL +SVAF+H L L+HTDLKPEN+LLVS
Sbjct: 464 HIQMLSQQLFKSVAFLHSLGLVHTDLKPENVLLVS 498

Protein kinase that may act as a negative regulator of filamentous growth and flocculation. Appears to have a role in normal cell wall and septum formation and in cell seperation. May have antagonistic function in the regulation of beta-glucan distribution between the sites for cell wall and septum assembly.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|O35491|CLK2_MOUSE Dual specificity protein kinase CLK2 OS=Mus musculus GN=Clk2 PE=1 SV=2

 Score =  164 bits (415), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 76/159 (47%), Positives = 114/159 (71%), Gaps = 2/159 (1%)

Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKYREA 134
           DD +GH ++ +G+ L  RY I+S +GEGTFG+VV+C D+ +    VA+KI++++ KY+EA
Sbjct: 144 DDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGTQVALKIIKNVEKYKEA 203

Query: 135 AMIEIDVLQRLARHDIGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
           A +EI+VL+++   D      CVQ+ +WFDY  H+CI FE LG S +DFL+ N+Y  +PI
Sbjct: 204 ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 263

Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY 232
             VR +  QL ++V F+H+ +L HTDLKPENIL V+++Y
Sbjct: 264 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDY 302

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Acts as a suppressor of hepatic gluconeogenesis and glucose output by repressing PPARGC1A transcriptional activity on gluconeogenic genes via its phosphorylation. Phosphorylates PPP2R5B thereby stimulating the assembly of PP2A phosphatase with the PPP2R5B-AKT1 complex leading to dephosphorylation of AKT1. Phosphorylates: PTPN1, SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|O35493|CLK4_MOUSE Dual specificity protein kinase CLK4 OS=Mus musculus GN=Clk4 PE=1 SV=1

 Score =  164 bits (414), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 79/160 (49%), Positives = 110/160 (68%), Gaps = 2/160 (1%)

Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKEL-VAIKIVRSINKYREA 134
           DD++GH +   G+ L  RY I+  +GEG FG+VVEC D+    L VA+KIV+++ +YREA
Sbjct: 141 DDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGLHVAVKIVKNVGRYREA 200

Query: 135 AMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
           A  EI VL+ L   D     RCVQ+  WFD+  H+CIVFE LG S YDF+++NS+  F I
Sbjct: 201 ARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQI 260

Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV 233
           D +R++  Q+ +S+ F+H  +L HTDLKPENIL V ++YV
Sbjct: 261 DHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYV 300

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex and may be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing. Phosphorylates SRSF1 and SRSF3. Required for the regulation of alternative splicing of MAPT/TAU. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P49760|CLK2_HUMAN Dual specificity protein kinase CLK2 OS=Homo sapiens GN=CLK2 PE=1 SV=1

 Score =  163 bits (413), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 76/159 (47%), Positives = 114/159 (71%), Gaps = 2/159 (1%)

Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKEL-VAIKIVRSINKYREA 134
           DD +GH ++ +G+ L  RY I+S +GEGTFG+VV+C D+ +    VA+KI++++ KY+EA
Sbjct: 145 DDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEA 204

Query: 135 AMIEIDVLQRLARHDIGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
           A +EI+VL+++   D      CVQ+ +WFDY  H+CI FE LG S +DFL+ N+Y  +PI
Sbjct: 205 ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 264

Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY 232
             VR +  QL ++V F+H+ +L HTDLKPENIL V+++Y
Sbjct: 265 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDY 303

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Acts as a suppressor of hepatic gluconeogenesis and glucose output by repressing PPARGC1A transcriptional activity on gluconeogenic genes via its phosphorylation. Phosphorylates PPP2R5B thereby stimulating the assembly of PP2A phosphatase with the PPP2R5B-AKT1 complex leading to dephosphorylation of AKT1. Phosphorylates: PTPN1, SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q9HAZ1|CLK4_HUMAN Dual specificity protein kinase CLK4 OS=Homo sapiens GN=CLK4 PE=1 SV=1

 Score =  163 bits (412), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 78/160 (48%), Positives = 110/160 (68%), Gaps = 2/160 (1%)

Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKEL-VAIKIVRSINKYREA 134
           DD++GH +   G+ L  RY I+  +GEG FG+VVEC D+    + VA+KIV+++ +YREA
Sbjct: 141 DDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGMHVAVKIVKNVGRYREA 200

Query: 135 AMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
           A  EI VL+ L   D     RCVQ+  WFD+  H+CIVFE LG S YDF+++NS+  F I
Sbjct: 201 ARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQI 260

Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV 233
           D +R++  Q+ +S+ F+H  +L HTDLKPENIL V ++YV
Sbjct: 261 DHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYV 300

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex and may be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing. Phosphorylates SRSF1 and SRSF3. Required for the regulation of alternative splicing of MAPT/TAU. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P22518|CLK1_MOUSE Dual specificity protein kinase CLK1 OS=Mus musculus GN=Clk1 PE=1 SV=2

 Score =  161 bits (408), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 78/162 (48%), Positives = 113/162 (69%), Gaps = 2/162 (1%)

Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSINKYREA 134
           DD++GH +   G+ L+ RY I+  +GEG FG+VVEC D++     VA+KIV+++++Y EA
Sbjct: 142 DDEEGHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKVGGRRVAVKIVKNVDRYCEA 201

Query: 135 AMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
           A  EI VL+ L   D   T RCVQ+  WF++R HICIVFE LG S YDF+++NS+  F +
Sbjct: 202 AQSEIQVLEHLNTTDPHSTFRCVQMLEWFEHRGHICIVFELLGLSTYDFIKENSFLPFRM 261

Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV 235
           D +R++  Q+ +SV F+H  +L HTDLKPENIL V ++Y + 
Sbjct: 262 DHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVKSDYTEA 303

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex and may be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing. Phosphorylates: SRSF1, SRSF3 and PTPN1. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells and adenovirus E1A pre-mRNA.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	264
224138498	433	predicted protein [Populus trichocarpa]	0.893	0.545	0.842	1e-114
147800314	448	hypothetical protein VITISV_001943 [Viti	0.901	0.531	0.859	1e-114
225439856	429	PREDICTED: serine/threonine-protein kina	0.901	0.554	0.859	1e-114
449439982	428	PREDICTED: serine/threonine-protein kina	0.916	0.565	0.855	1e-112
449439980	433	PREDICTED: serine/threonine-protein kina	0.916	0.558	0.855	1e-112
356505140	427	PREDICTED: serine/threonine-protein kina	0.890	0.550	0.793	1e-111
356505138	444	PREDICTED: serine/threonine-protein kina	0.916	0.545	0.773	1e-109
255638456	444	unknown [Glycine max]	0.916	0.545	0.769	1e-109
255584557	391	afc, putative [Ricinus communis] gi|2235	0.912	0.616	0.781	1e-109
15231839	467	serine/threonine-protein kinase AFC1 [Ar	0.916	0.518	0.777	1e-108

>gi|224138498|ref|XP_002322829.1| predicted protein [Populus trichocarpa] gi|222867459|gb|EEF04590.1| predicted protein [Populus trichocarpa]

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 209/248 (84%), Positives = 221/248 (89%), Gaps = 12/248 (4%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPP----LPPPKVLPALYCVQEFGNGG--MPN 54
           METQRI EFPHKNMDKRPRKR RLTWD+PPP    L P KV+P ++C QEFGNG   +PN
Sbjct: 1   METQRITEFPHKNMDKRPRKRQRLTWDIPPPPPPFLAPAKVVPGMFCGQEFGNGNGVIPN 60

Query: 55  YACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDN 114
           Y    +FY    R GSPPWRPDDKDGHYVFAIG+NLTPRYRILSKMGEGTFGQV+ECFDN
Sbjct: 61  YG---LFYN---RNGSPPWRPDDKDGHYVFAIGDNLTPRYRILSKMGEGTFGQVLECFDN 114

Query: 115 EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEK 174
           EKKELVAIKIVRSI+KYREAAM EIDVLQRLARHDIG TRCVQIRNWFDYRNHICIVFEK
Sbjct: 115 EKKELVAIKIVRSIHKYREAAMTEIDVLQRLARHDIGSTRCVQIRNWFDYRNHICIVFEK 174

Query: 175 LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK 234
           LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH+L LIHTDLKPENILLVS+EY+K
Sbjct: 175 LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHDLHLIHTDLKPENILLVSSEYIK 234

Query: 235 VPDYKVPS 242
           VPDYK  S
Sbjct: 235 VPDYKFLS 242

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147800314|emb|CAN73108.1| hypothetical protein VITISV_001943 [Vitis vinifera]

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 208/242 (85%), Positives = 226/242 (93%), Gaps = 4/242 (1%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSM 60
           METQRI EFPHKNMDKRPRKRPRLTWD+PPPLPPPKV+P +YC QEF    + NY  SS+
Sbjct: 1   METQRITEFPHKNMDKRPRKRPRLTWDMPPPLPPPKVVPGMYCSQEF----VSNYPYSSL 56

Query: 61  FYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELV 120
           FY  + R GSPPWRPDDKDGHY+FAIGENLTPRYRI+SKMGEGTFGQV+ECFDN+KKE+V
Sbjct: 57  FYKGVTRNGSPPWRPDDKDGHYIFAIGENLTPRYRIISKMGEGTFGQVLECFDNDKKEVV 116

Query: 121 AIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLY 180
           AIKIVRSI+KYREAAMIEIDVLQ+LARHD+GGTRCVQIRNWFDYRNHICIVFEKLGPSLY
Sbjct: 117 AIKIVRSIHKYREAAMIEIDVLQKLARHDVGGTRCVQIRNWFDYRNHICIVFEKLGPSLY 176

Query: 181 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           DFLRKNSYRSFPIDLVRELGRQLLESVAFMH+LRLIHTDLKPENILLVS++Y+KVPDYK 
Sbjct: 177 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHDLRLIHTDLKPENILLVSSDYIKVPDYKF 236

Query: 241 PS 242
            S
Sbjct: 237 LS 238

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439856|ref|XP_002278124.1| PREDICTED: serine/threonine-protein kinase AFC1 [Vitis vinifera] gi|297741539|emb|CBI32671.3| unnamed protein product [Vitis vinifera]

 Score =  415 bits (1067), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 208/242 (85%), Positives = 226/242 (93%), Gaps = 4/242 (1%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSM 60
           METQRI EFPHKNMDKRPRKRPRLTWD+PPPLPPPKV+P +YC QEF    + NY  SS+
Sbjct: 1   METQRITEFPHKNMDKRPRKRPRLTWDMPPPLPPPKVVPGMYCSQEF----VSNYPYSSL 56

Query: 61  FYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELV 120
           FY  + R GSPPWRPDDKDGHY+FAIGENLTPRYRI+SKMGEGTFGQV+ECFDN+KKE+V
Sbjct: 57  FYKGVTRNGSPPWRPDDKDGHYIFAIGENLTPRYRIISKMGEGTFGQVLECFDNDKKEVV 116

Query: 121 AIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLY 180
           AIKIVRSI+KYREAAMIEIDVLQ+LARHD+GGTRCVQIRNWFDYRNHICIVFEKLGPSLY
Sbjct: 117 AIKIVRSIHKYREAAMIEIDVLQKLARHDVGGTRCVQIRNWFDYRNHICIVFEKLGPSLY 176

Query: 181 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           DFLRKNSYRSFPIDLVRELGRQLLESVAFMH+LRLIHTDLKPENILLVS++Y+KVPDYK 
Sbjct: 177 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHDLRLIHTDLKPENILLVSSDYIKVPDYKF 236

Query: 241 PS 242
            S
Sbjct: 237 LS 238

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439982|ref|XP_004137764.1| PREDICTED: serine/threonine-protein kinase AFC1-like isoform 2 [Cucumis sativus]

 Score =  410 bits (1054), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 207/242 (85%), Positives = 222/242 (91%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSM 60
           METQRIIEFPHKNMDKRPRKR RL WD+PPP+PPPKVLP  YC QEFGNG +PNYA  SM
Sbjct: 1   METQRIIEFPHKNMDKRPRKRQRLAWDMPPPVPPPKVLPPPYCGQEFGNGQVPNYAYPSM 60

Query: 61  FYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELV 120
           +    PR GSPPWRPD+KDGHYVF+IGE LTPRY ILSKMGEGTFGQV+EC D+EKKE+V
Sbjct: 61  YCRGAPRVGSPPWRPDNKDGHYVFSIGECLTPRYTILSKMGEGTFGQVLECLDSEKKEVV 120

Query: 121 AIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLY 180
           AIKIVRSI+KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLY
Sbjct: 121 AIKIVRSISKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLY 180

Query: 181 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           DFLRKNSYRSFPIDLVRE  RQLLESVAFMHELRLIHTDLKPENILLVS+E+++VPD+K 
Sbjct: 181 DFLRKNSYRSFPIDLVREFARQLLESVAFMHELRLIHTDLKPENILLVSSEFIRVPDHKF 240

Query: 241 PS 242
            S
Sbjct: 241 LS 242

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439980|ref|XP_004137763.1| PREDICTED: serine/threonine-protein kinase AFC1-like isoform 1 [Cucumis sativus]

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 207/242 (85%), Positives = 222/242 (91%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSM 60
           METQRIIEFPHKNMDKRPRKR RL WD+PPP+PPPKVLP  YC QEFGNG +PNYA  SM
Sbjct: 1   METQRIIEFPHKNMDKRPRKRQRLAWDMPPPVPPPKVLPPPYCGQEFGNGQVPNYAYPSM 60

Query: 61  FYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELV 120
           +    PR GSPPWRPD+KDGHYVF+IGE LTPRY ILSKMGEGTFGQV+EC D+EKKE+V
Sbjct: 61  YCRGAPRVGSPPWRPDNKDGHYVFSIGECLTPRYTILSKMGEGTFGQVLECLDSEKKEVV 120

Query: 121 AIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLY 180
           AIKIVRSI+KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLY
Sbjct: 121 AIKIVRSISKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLY 180

Query: 181 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           DFLRKNSYRSFPIDLVRE  RQLLESVAFMHELRLIHTDLKPENILLVS+E+++VPD+K 
Sbjct: 181 DFLRKNSYRSFPIDLVREFARQLLESVAFMHELRLIHTDLKPENILLVSSEFIRVPDHKF 240

Query: 241 PS 242
            S
Sbjct: 241 LS 242

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505140|ref|XP_003521350.1| PREDICTED: serine/threonine-protein kinase AFC1-like isoform 2 [Glycine max]

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 192/242 (79%), Positives = 213/242 (88%), Gaps = 7/242 (2%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSM 60
           METQRIIEFPH+NMDKRPRK+ RLTWD+        VLP +YC QE GNG +PN+A  S+
Sbjct: 1   METQRIIEFPHRNMDKRPRKKQRLTWDM-------HVLPTMYCKQEVGNGVVPNHAYPSL 53

Query: 61  FYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELV 120
           FY  +PR GSPPWRPDDKDGHYVFA+GENLTPRY+ILSKMGEGTFGQV+EC DNEK+E+V
Sbjct: 54  FYRGMPRNGSPPWRPDDKDGHYVFAVGENLTPRYKILSKMGEGTFGQVLECLDNEKEEIV 113

Query: 121 AIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLY 180
           AIK+VRSINKYREAA  EI+VL RLARHD+ G  CVQIRNWFDYRNHICIVFEKLGPSLY
Sbjct: 114 AIKVVRSINKYREAARTEIEVLLRLARHDVDGAHCVQIRNWFDYRNHICIVFEKLGPSLY 173

Query: 181 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           DFLRKNSYRSFPIDLVRE GRQLLESVAFMH+L LIHTDLKPENILL+S+E++KVPDYK 
Sbjct: 174 DFLRKNSYRSFPIDLVREFGRQLLESVAFMHDLCLIHTDLKPENILLISSEFIKVPDYKF 233

Query: 241 PS 242
            S
Sbjct: 234 LS 235

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356505138|ref|XP_003521349.1| PREDICTED: serine/threonine-protein kinase AFC1-like isoform 1 [Glycine max]

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 195/252 (77%), Positives = 217/252 (86%), Gaps = 10/252 (3%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDV----------PPPLPPPKVLPALYCVQEFGNG 50
           METQRIIEFPH+NMDKRPRK+ RLTWD+          P P P  +VLP +YC QE GNG
Sbjct: 1   METQRIIEFPHRNMDKRPRKKQRLTWDMHVPPPPPPPPPLPPPKLQVLPTMYCKQEVGNG 60

Query: 51  GMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVE 110
            +PN+A  S+FY  +PR GSPPWRPDDKDGHYVFA+GENLTPRY+ILSKMGEGTFGQV+E
Sbjct: 61  VVPNHAYPSLFYRGMPRNGSPPWRPDDKDGHYVFAVGENLTPRYKILSKMGEGTFGQVLE 120

Query: 111 CFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170
           C DNEK+E+VAIK+VRSINKYREAA  EI+VL RLARHD+ G  CVQIRNWFDYRNHICI
Sbjct: 121 CLDNEKEEIVAIKVVRSINKYREAARTEIEVLLRLARHDVDGAHCVQIRNWFDYRNHICI 180

Query: 171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA 230
           VFEKLGPSLYDFLRKNSYRSFPIDLVRE GRQLLESVAFMH+L LIHTDLKPENILL+S+
Sbjct: 181 VFEKLGPSLYDFLRKNSYRSFPIDLVREFGRQLLESVAFMHDLCLIHTDLKPENILLISS 240

Query: 231 EYVKVPDYKVPS 242
           E++KVPDYK  S
Sbjct: 241 EFIKVPDYKFLS 252

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255638456|gb|ACU19537.1| unknown [Glycine max]

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 194/252 (76%), Positives = 216/252 (85%), Gaps = 10/252 (3%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDV----------PPPLPPPKVLPALYCVQEFGNG 50
           METQRIIEFPH+NMDKRPRK+ RLTWD+          P P P  +VLP +YC QE GNG
Sbjct: 1   METQRIIEFPHRNMDKRPRKKQRLTWDMHVPPPPPPPPPLPPPKLQVLPTMYCKQEVGNG 60

Query: 51  GMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVE 110
            +PN+A  S+FY  +PR GSPPWRPDDKDGHYVFA+GENLTPRY+ILSKMGEGTFGQV+E
Sbjct: 61  VVPNHAYPSLFYRGMPRNGSPPWRPDDKDGHYVFAVGENLTPRYKILSKMGEGTFGQVLE 120

Query: 111 CFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI 170
           C DNEK+E+VAIK+VRSINKYREAA  EI+VL RLARHD+ G  CVQIRNWFDYRNHICI
Sbjct: 121 CLDNEKEEIVAIKVVRSINKYREAARTEIEVLLRLARHDVDGAHCVQIRNWFDYRNHICI 180

Query: 171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA 230
           VFEKLGPSLYDFLRKN YRSFPIDLVRE GRQLLESVAFMH+L LIHTDLKPENILL+S+
Sbjct: 181 VFEKLGPSLYDFLRKNCYRSFPIDLVREFGRQLLESVAFMHDLCLIHTDLKPENILLISS 240

Query: 231 EYVKVPDYKVPS 242
           E++KVPDYK  S
Sbjct: 241 EFIKVPDYKFLS 252

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255584557|ref|XP_002533005.1| afc, putative [Ricinus communis] gi|223527216|gb|EEF29380.1| afc, putative [Ricinus communis]

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 207/265 (78%), Positives = 221/265 (83%), Gaps = 24/265 (9%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGN---GGM--PNY 55
           METQRI E P +NMDKRPRKRPRLTWD+PPP PP KVL A+YC Q+ GN   GG+   N+
Sbjct: 1   METQRITELPLRNMDKRPRKRPRLTWDMPPPPPP-KVLSAMYCGQDLGNNDGGGIINTNF 59

Query: 56  ACSSMFYG------------------AIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRIL 97
              +M+Y                    +PR  SPPWRPDDKDGHYVFAIGENLTPRYRIL
Sbjct: 60  GYPNMYYRDVPVSVPVPVPVPIPLPITVPRNVSPPWRPDDKDGHYVFAIGENLTPRYRIL 119

Query: 98  SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQ 157
            KMGEGTFGQV+EC DNEKKE+VAIKIVRSI+KYREAAMIEIDVLQRLARHDIGGTRCVQ
Sbjct: 120 GKMGEGTFGQVLECLDNEKKEIVAIKIVRSIHKYREAAMIEIDVLQRLARHDIGGTRCVQ 179

Query: 158 IRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
           IRNWFDYRNHICIVFEKLGPSLYDFLRKNSY SFPIDLVRELGRQLLESVAFMH+LRLIH
Sbjct: 180 IRNWFDYRNHICIVFEKLGPSLYDFLRKNSYSSFPIDLVRELGRQLLESVAFMHDLRLIH 239

Query: 218 TDLKPENILLVSAEYVKVPDYKVPS 242
           TDLKPENILLVSAEY+KVPDYK  S
Sbjct: 240 TDLKPENILLVSAEYIKVPDYKFLS 264

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15231839|ref|NP_190925.1| serine/threonine-protein kinase AFC1 [Arabidopsis thaliana] gi|42570490|ref|NP_850695.2| serine/threonine-protein kinase AFC1 [Arabidopsis thaliana] gi|79314891|ref|NP_001030853.1| serine/threonine-protein kinase AFC1 [Arabidopsis thaliana] gi|26454604|sp|P51566.2|AFC1_ARATH RecName: Full=Serine/threonine-protein kinase AFC1 gi|642132|dbj|BAA08215.1| protein kinase [Arabidopsis thaliana] gi|6729508|emb|CAB67664.1| protein kinase (AME2/AFC1) [Arabidopsis thaliana] gi|222424132|dbj|BAH20025.1| AT3G53570 [Arabidopsis thaliana] gi|332645589|gb|AEE79110.1| serine/threonine-protein kinase AFC1 [Arabidopsis thaliana] gi|332645590|gb|AEE79111.1| serine/threonine-protein kinase AFC1 [Arabidopsis thaliana] gi|332645591|gb|AEE79112.1| serine/threonine-protein kinase AFC1 [Arabidopsis thaliana]

 Score =  395 bits (1016), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 192/247 (77%), Positives = 216/247 (87%), Gaps = 5/247 (2%)

Query: 1   METQRIIEFPHKNMDKRPRKRPRLTWDVPPPLPPPKVL-----PALYCVQEFGNGGMPNY 55
           +ETQR +EFPH+ +DKRPRKRPRLTWD  PPL PP        P LY   EF +G +PN+
Sbjct: 17  LETQRNVEFPHRIVDKRPRKRPRLTWDAAPPLLPPPPPPTVFQPPLYYGPEFASGLVPNF 76

Query: 56  ACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNE 115
              +MFY  +PR GSPPWRPDDKDGHYVF +G+ LTPRY+ILSKMGEGTFGQV+ECFDN+
Sbjct: 77  VYPNMFYNGLPRQGSPPWRPDDKDGHYVFVVGDTLTPRYQILSKMGEGTFGQVLECFDNK 136

Query: 116 KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL 175
            KE+VAIK++RSINKYREAAMIEIDVLQRL RHD+GG+RCVQIRNWFDYRNHICIVFEKL
Sbjct: 137 NKEVVAIKVIRSINKYREAAMIEIDVLQRLTRHDVGGSRCVQIRNWFDYRNHICIVFEKL 196

Query: 176 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV 235
           GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA+MH+LRLIHTDLKPENILLVS+EY+K+
Sbjct: 197 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAYMHDLRLIHTDLKPENILLVSSEYIKI 256

Query: 236 PDYKVPS 242
           PDYK  S
Sbjct: 257 PDYKFLS 263

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	264
TAIR|locus:2084006	467	FC1 "FUS3-complementing gene 1	0.905	0.511	0.758	1.8e-101
TAIR|locus:2121984	427	FC2 "FUS3-complementing gene 2	0.897	0.555	0.669	7.5e-89
TAIR|locus:2125622	400	AME3 [Arabidopsis thaliana (ta	0.674	0.445	0.719	2.5e-73
FB|FBgn0259220	832	Doa "Darkener of apricot" [Dro	0.625	0.198	0.481	2.9e-42
ASPGD|ASPL0000062305	667	AN0988 [Emericella nidulans (t	0.655	0.259	0.491	2.3e-40
UNIPROTKB|E1B9M6	481	CLK4 "Uncharacterized protein"	0.598	0.328	0.487	2.3e-39
UNIPROTKB|E1C4D7	479	LOC100859563 "Uncharacterized	0.598	0.329	0.481	2.9e-39
UNIPROTKB|E1C4D8	477	LOC100859563 "Uncharacterized	0.598	0.331	0.481	2.9e-39
UNIPROTKB|F1RLJ5	500	CLK2 "Uncharacterized protein"	0.594	0.314	0.477	3.7e-39
MGI|MGI:1098551	481	Clk4 "CDC like kinase 4" [Mus	0.598	0.328	0.493	3.7e-39

TAIR|locus:2084006 FC1 "FUS3-complementing gene 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1006 (359.2 bits), Expect = 1.8e-101, P = 1.8e-101
 Identities = 185/244 (75%), Positives = 209/244 (85%)

Query:     1 METQRIIEFPHKNMDKRPRKRPRLTWDXXXXXXX-----XXXXXALYCVQEFGNGGMPNY 55
             +ETQR +EFPH+ +DKRPRKRPRLTWD                  LY   EF +G +PN+
Sbjct:    17 LETQRNVEFPHRIVDKRPRKRPRLTWDAAPPLLPPPPPPTVFQPPLYYGPEFASGLVPNF 76

Query:    56 ACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNE 115
                +MFY  +PR GSPPWRPDDKDGHYVF +G+ LTPRY+ILSKMGEGTFGQV+ECFDN+
Sbjct:    77 VYPNMFYNGLPRQGSPPWRPDDKDGHYVFVVGDTLTPRYQILSKMGEGTFGQVLECFDNK 136

Query:   116 KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL 175
              KE+VAIK++RSINKYREAAMIEIDVLQRL RHD+GG+RCVQIRNWFDYRNHICIVFEKL
Sbjct:   137 NKEVVAIKVIRSINKYREAAMIEIDVLQRLTRHDVGGSRCVQIRNWFDYRNHICIVFEKL 196

Query:   176 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV 235
             GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA+MH+LRLIHTDLKPENILLVS+EY+K+
Sbjct:   197 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAYMHDLRLIHTDLKPENILLVSSEYIKI 256

Query:   236 PDYK 239
             PDYK
Sbjct:   257 PDYK 260

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0045727 "positive regulation of translation" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2121984 FC2 "FUS3-complementing gene 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 887 (317.3 bits), Expect = 7.5e-89, P = 7.5e-89
 Identities = 164/245 (66%), Positives = 196/245 (80%)

Query:     1 METQRIIEFPHKNMDKRPRKRPRLTWDXXXXXXXXXXXXALYCVQEFGN------GGMPN 54
             ME +R+ EFPH +MD+RPRKR RL WD             ++C QE GN       G P+
Sbjct:     1 MEMERVHEFPHTHMDRRPRKRARLGWDVLPQATKAQV--GMFCGQEIGNISSFASSGAPS 58

Query:    55 YACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDN 114
                SS+    + R GSPPWR DDKDGHY+F +G++LTPRY+I SKMGEGTFGQV+EC+D 
Sbjct:    59 DNSSSLCVKGVARNGSPPWREDDKDGHYIFELGDDLTPRYKIYSKMGEGTFGQVLECWDR 118

Query:   115 EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEK 174
             E+KE+VA+KIVR + KYREAAMIEI++LQ+L +HD GG RCVQIRNWFDYRNHICIVFEK
Sbjct:   119 ERKEMVAVKIVRGVKKYREAAMIEIEMLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEK 178

Query:   175 LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK 234
             LG SLYDFLRKN+YRSFPIDLVRE+G QLLE VAFMH+LR+IHTDLKPENILLVS++YVK
Sbjct:   179 LGSSLYDFLRKNNYRSFPIDLVREIGWQLLECVAFMHDLRMIHTDLKPENILLVSSDYVK 238

Query:   235 VPDYK 239
             +P+YK
Sbjct:   239 IPEYK 243

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0004672 "protein kinase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006397 "mRNA processing" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0045727 "positive regulation of translation" evidence=RCA

TAIR|locus:2125622 AME3 [Arabidopsis thaliana (taxid:3702)]

 Score = 696 (250.1 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
 Identities = 128/178 (71%), Positives = 156/178 (87%)

Query:    62 YGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVA 121
             +G+  R  SPP R DD+DGHYVF++ +NLTPRY+ILSKMGEGTFG+V+EC+D + KE VA
Sbjct:    39 HGSDGRILSPPLRDDDRDGHYVFSLRDNLTPRYKILSKMGEGTFGRVLECWDRDTKEYVA 98

Query:   122 IKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYD 181
             IKI+RSI KYR+AAMIEIDVLQ+L + D G TRCVQ++NWFDYRNHICIVFEKLGPSL+D
Sbjct:    99 IKIIRSIKKYRDAAMIEIDVLQKLVKSDKGRTRCVQMKNWFDYRNHICIVFEKLGPSLFD 158

Query:   182 FLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK 239
             FL++N Y +FP+ LVR+ G QLLESVA+MHEL+L+HTDLKPENILLVS+E VK+PD K
Sbjct:   159 FLKRNKYSAFPLALVRDFGCQLLESVAYMHELQLVHTDLKPENILLVSSENVKLPDNK 216

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0045727 "positive regulation of translation" evidence=RCA

FB|FBgn0259220 Doa "Darkener of apricot" [Drosophila melanogaster (taxid:7227)]

 Score = 438 (159.2 bits), Expect = 2.9e-42, Sum P(2) = 2.9e-42
 Identities = 80/166 (48%), Positives = 120/166 (72%)

Query:    76 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
             DD DGH ++  G+ L  RY+I++ +GEGTFG+VV+  D E+   +A+KI++++ KYREAA
Sbjct:   461 DDADGHLIYHTGDILHHRYKIMATLGEGTFGRVVKVKDMERDYCMALKIIKNVEKYREAA 520

Query:   136 MIEIDVLQRLARHDIGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
              +EI+ L+++A+ D      CV++ +WFDY  H+CIVFE LG S++DFLR+N+Y  +P+D
Sbjct:   521 KLEINALEKIAQKDPHCDHLCVKMIDWFDYHGHMCIVFEMLGLSVFDFLRENNYEPYPLD 580

Query:   195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
              VR +  QL  SV F+H+ RL HTDLKPENIL V ++Y    ++K+
Sbjct:   581 QVRHMAYQLCYSVKFLHDNRLTHTDLKPENILFVDSDYTSHYNHKI 626

GO:0007399 "nervous system development" evidence=NAS;IMP

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0004672 "protein kinase activity" evidence=ISS;IDA

GO:0007350 "blastoderm segmentation" evidence=NAS;IMP

GO:0048749 "compound eye development" evidence=NAS;IMP

GO:0005634 "nucleus" evidence=IC;IDA;NAS

GO:0048477 "oogenesis" evidence=IMP

GO:0007417 "central nervous system development" evidence=NAS

GO:0008362 "chitin-based embryonic cuticle biosynthetic process" evidence=NAS

GO:0045494 "photoreceptor cell maintenance" evidence=NAS

GO:0007548 "sex differentiation" evidence=IGI;IMP

GO:0004674 "protein serine/threonine kinase activity" evidence=NAS;IDA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=NAS

GO:0042051 "compound eye photoreceptor development" evidence=IEP;IMP;NAS

GO:0008407 "chaeta morphogenesis" evidence=NAS

GO:0000165 "MAPK cascade" evidence=IGI

GO:0005737 "cytoplasm" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=NAS

GO:0048102 "autophagic cell death" evidence=IEP

GO:0035071 "salivary gland cell autophagic cell death" evidence=IEP

GO:0030717 "karyosome formation" evidence=IMP

GO:0005524 "ATP binding" evidence=IEA

GO:0000381 "regulation of alternative mRNA splicing, via spliceosome" evidence=IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0009306 "protein secretion" evidence=IMP

GO:0005875 "microtubule associated complex" evidence=IDA

GO:0048854 "brain morphogenesis" evidence=IMP

GO:0001964 "startle response" evidence=IMP

GO:0031987 "locomotion involved in locomotory behavior" evidence=IMP

ASPGD|ASPL0000062305 AN0988 [Emericella nidulans (taxid:162425)]

 Score = 433 (157.5 bits), Expect = 2.3e-40, P = 2.3e-40
 Identities = 86/175 (49%), Positives = 116/175 (66%)

Query:    76 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
             DD DGHY+      +T RY I+  +G+GTFG+VVE +D ++K   AIKI+RSI KYR+A+
Sbjct:   283 DDDDGHYIVNPNTPITDRYSIIKLLGQGTFGKVVEAYDKQRKARCAIKIIRSIQKYRDAS 342

Query:   136 MIEIDVLQRLARHDIGG-TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
              IE+ VL  LA +D     +C+ +R+ FD+RNHICIV + LG S++DFL+ N +  FP  
Sbjct:   343 RIELRVLSTLASNDKHNRNKCIHLRDCFDFRNHICIVTDLLGQSVFDFLKGNGFVPFPSS 402

Query:   195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP-DYKVPSPRHAFS 248
              ++   RQL  SVAF+H+L LIHTDLKPENILLV   Y     +  +PS   A S
Sbjct:   403 QIQSFARQLFTSVAFLHDLNLIHTDLKPENILLVKNAYQTFTYNRTIPSSSTAIS 457

GO:0005634 "nucleus" evidence=IEA

GO:0048026 "positive regulation of mRNA splicing, via spliceosome" evidence=IEA

GO:0060258 "negative regulation of filamentous growth" evidence=IEA

GO:0060237 "regulation of fungal-type cell wall organization" evidence=IEA

GO:0034599 "cellular response to oxidative stress" evidence=IEA

GO:0010590 "regulation of cytokinetic cell separation" evidence=IEA

GO:0051519 "activation of bipolar cell growth" evidence=IEA

GO:0060257 "negative regulation of flocculation" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E1B9M6 CLK4 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
 Identities = 78/160 (48%), Positives = 111/160 (69%)

Query:    76 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKEL-VAIKIVRSINKYREA 134
             DD++GH +   G+ L  RY I+  +GEG FG+VVEC D++   + VA+KIV+++ +YREA
Sbjct:   141 DDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHDMDGIHVAVKIVKNVGRYREA 200

Query:   135 AMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
             A  EI VL+ L   D     RCVQ+  WFD+  H+CIVFE LG S YDF+++NS+  F I
Sbjct:   201 ARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQI 260

Query:   194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV 233
             D +R++  Q+ +S+ F+H  +L HTDLKPENIL V ++YV
Sbjct:   261 DHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYV 300

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0043484 "regulation of RNA splicing" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E1C4D7 LOC100859563 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
 Identities = 77/160 (48%), Positives = 113/160 (70%)

Query:    76 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKEL-VAIKIVRSINKYREA 134
             DD++GH +   G+ L  RY I++ +GEG FG+VVEC D++ + + VA+KIV+++ +YREA
Sbjct:   141 DDEEGHLICESGDVLRARYEIVATLGEGAFGKVVECIDHDMRGMHVAVKIVKNVGRYREA 200

Query:   135 AMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
             A  EI VL+ L   D   T RCVQ+  WFD+  H+CIVFE LG S YDF+++NS+  F I
Sbjct:   201 ARSEIQVLEHLNTMDPSSTFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFHI 260

Query:   194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV 233
             + +R +  Q+ +S+ F+H  +L HTDLKPENIL V ++Y+
Sbjct:   261 NDIRNMAYQICQSINFLHHNKLTHTDLKPENILFVESDYI 300

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E1C4D8 LOC100859563 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
 Identities = 77/160 (48%), Positives = 113/160 (70%)

Query:    76 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKEL-VAIKIVRSINKYREA 134
             DD++GH +   G+ L  RY I++ +GEG FG+VVEC D++ + + VA+KIV+++ +YREA
Sbjct:   139 DDEEGHLICESGDVLRARYEIVATLGEGAFGKVVECIDHDMRGMHVAVKIVKNVGRYREA 198

Query:   135 AMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
             A  EI VL+ L   D   T RCVQ+  WFD+  H+CIVFE LG S YDF+++NS+  F I
Sbjct:   199 ARSEIQVLEHLNTMDPSSTFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFHI 258

Query:   194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV 233
             + +R +  Q+ +S+ F+H  +L HTDLKPENIL V ++Y+
Sbjct:   259 NDIRNMAYQICQSINFLHHNKLTHTDLKPENILFVESDYI 298

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1RLJ5 CLK2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
 Identities = 76/159 (47%), Positives = 114/159 (71%)

Query:    76 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKEL-VAIKIVRSINKYREA 134
             DD +GH ++ +G+ L  RY I+S +GEGTFG+VV+C D+ +    VA+KI++++ KY+EA
Sbjct:   145 DDAEGHLIYHVGDWLQERYEIISTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEA 204

Query:   135 AMIEIDVLQRLARHDIGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
             A +EI+VL+++   D      CVQ+ +WFDY  H+CI FE LG S +DFL+ N+Y  +PI
Sbjct:   205 ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 264

Query:   194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY 232
               VR +  QL ++V F+H+ +L HTDLKPENIL V+++Y
Sbjct:   265 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDY 303

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0045721 "negative regulation of gluconeogenesis" evidence=IEA

GO:0043484 "regulation of RNA splicing" evidence=IEA

GO:0032526 "response to retinoic acid" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0010212 "response to ionizing radiation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

MGI|MGI:1098551 Clk4 "CDC like kinase 4" [Mus musculus (taxid:10090)]

 Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
 Identities = 79/160 (49%), Positives = 110/160 (68%)

Query:    76 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKEL-VAIKIVRSINKYREA 134
             DD++GH +   G+ L  RY I+  +GEG FG+VVEC D+    L VA+KIV+++ +YREA
Sbjct:   141 DDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGLHVAVKIVKNVGRYREA 200

Query:   135 AMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
             A  EI VL+ L   D     RCVQ+  WFD+  H+CIVFE LG S YDF+++NS+  F I
Sbjct:   201 ARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQI 260

Query:   194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV 233
             D +R++  Q+ +S+ F+H  +L HTDLKPENIL V ++YV
Sbjct:   261 DHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYV 300

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IDA

GO:0043484 "regulation of RNA splicing" evidence=ISO

GO:0046777 "protein autophosphorylation" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P51566	AFC1_ARATH	2, ., 7, ., 1, 2, ., 1	0.7773	0.9166	0.5182	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.12	0.921
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00160734 hypothetical protein (434 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	264
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	4e-38
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	8e-32
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-30
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	2e-28
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	7e-27
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	2e-26
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	4e-22
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	6e-22
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	1e-21
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	9e-20
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-19
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	5e-17
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	9e-17
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	4e-16
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	5e-16
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	5e-16
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	5e-15
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	5e-15
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	9e-15
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-14
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	3e-14
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	4e-14
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	5e-14
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	2e-13
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	2e-13
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-13
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	6e-13
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	8e-13
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	1e-12
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	1e-12
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	2e-12
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	3e-12
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	3e-12
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	3e-12
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	3e-12
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	3e-12
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	4e-12
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	6e-12
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	7e-12
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	9e-12
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-11
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-11
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	2e-11
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	3e-11
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	3e-11
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-11
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	3e-11
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-11
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	5e-11
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	6e-11
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	8e-11
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-10
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	3e-10
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	4e-10
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	4e-10
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	9e-10
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	9e-10
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	1e-09
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	1e-09
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	2e-09
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	2e-09
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	2e-09
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	2e-09
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	3e-09
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	4e-09
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	5e-09
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	6e-09
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	6e-09
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	7e-09
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	7e-09
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	8e-09
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	9e-09
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	1e-08
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	2e-08
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	2e-08
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-08
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	2e-08
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-08
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	2e-08
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	6e-08
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	6e-08
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	6e-08
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	7e-08
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	8e-08
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	8e-08
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	8e-08
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	9e-08
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	1e-07
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	1e-07
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-07
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	1e-07
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	2e-07
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	2e-07
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-07
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	3e-07
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	4e-07
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	4e-07
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	4e-07
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	6e-07
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	7e-07
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	7e-07
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	9e-07
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	1e-06
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	1e-06
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	1e-06
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	1e-06
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	2e-06
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	2e-06
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	2e-06
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	3e-06
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	3e-06
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	3e-06
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	4e-06
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	4e-06
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	5e-06
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	5e-06
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	6e-06
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	7e-06
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	7e-06
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	7e-06
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	7e-06
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	8e-06
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	1e-05
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	1e-05
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	1e-05
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	1e-05
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	1e-05
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	2e-05
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	2e-05
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	2e-05
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	2e-05
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	2e-05
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	2e-05
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	2e-05
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	3e-05
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	3e-05
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	3e-05
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	3e-05
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	3e-05
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	3e-05
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	3e-05
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	4e-05
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	4e-05
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	4e-05
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	4e-05
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	5e-05
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	5e-05
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	5e-05
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	6e-05
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	8e-05
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	8e-05
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	9e-05
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	9e-05
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	1e-04
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	1e-04
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	1e-04
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-04
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	2e-04
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	2e-04
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	2e-04
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	2e-04
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	2e-04
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	2e-04
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	2e-04
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	2e-04
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	2e-04
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	3e-04
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	3e-04
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	4e-04
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	4e-04
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	4e-04
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	4e-04
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	5e-04
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	7e-04
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	7e-04
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	7e-04
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	0.001
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	0.001
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	0.001
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	0.001
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	0.002
COG3642	204	COG3642, COG3642, Mn2+-dependent serine/threonine	0.002
PRK14879	211	PRK14879, PRK14879, serine/threonine protein kinas	0.002
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	0.002
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	0.002
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	0.002
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	0.002
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	0.003
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	0.003
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	0.003
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	0.003
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	0.004
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	0.004
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	0.004
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  133 bits (338), Expect = 4e-38
 Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 10/147 (6%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHDIG 151
           Y IL K+GEG+FG+V    D +  +LVAIK+++   I K RE  + EI +L++L +H   
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKL-KHP-- 57

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               V++ + F+  + + +V E   G  L+D L+K        D  R   RQ+L ++ ++
Sbjct: 58  --NIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKR--GRLSEDEARFYLRQILSALEYL 113

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPD 237
           H   ++H DLKPENILL    +VK+ D
Sbjct: 114 HSKGIVHRDLKPENILLDEDGHVKLAD 140

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  116 bits (292), Expect = 8e-32
 Identities = 50/142 (35%), Positives = 77/142 (54%), Gaps = 10/142 (7%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           GEG FG V    D +  + VAIKI++    +   E  + EI++L++L  H       V++
Sbjct: 2   GEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKL-NHP----NIVKL 56

Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
              F+  NH+ +V E   G SL D L++N  +    D +  +  Q+LE + ++H   +IH
Sbjct: 57  YGVFEDENHLYLVMEYCEGGSLKDLLKENEGK-LSEDEILRILLQILEGLEYLHSNGIIH 115

Query: 218 TDLKPENILLVSAEY-VKVPDY 238
            DLKPENILL S    VK+ D+
Sbjct: 116 RDLKPENILLDSDNGKVKLADF 137

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  113 bits (285), Expect = 3e-30
 Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 13/149 (8%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSIN-KYREAAMIEIDVLQRLARHD- 149
           Y +L K+G G+FG V +       ++VA+KI+  RS   K  + A  EI +L+RL  H  
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRL-SHPN 59

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I     V++ + F+ ++H+ +V E      L+D+L +        D  +++  Q+L  + 
Sbjct: 60  I-----VRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRG--GPLSEDEAKKIALQILRGLE 112

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPD 237
           ++H   +IH DLKPENILL     VK+ D
Sbjct: 113 YLHSNGIIHRDLKPENILLDENGVVKIAD 141

Length = 260

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score =  112 bits (281), Expect = 2e-28
 Identities = 64/168 (38%), Positives = 103/168 (61%), Gaps = 14/168 (8%)

Query: 78  KDGHYVFAIGENL---TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA 134
           ++GH+   +GE++   T R++ILS +GEGTFG+VVE +D ++KE  A+KIVR++ KY   
Sbjct: 112 EEGHFYVVLGEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRD 171

Query: 135 AMIEIDVLQRLARHDIGGT-RCVQIRNWF-DYRNHICIVFEKLGPSLYDFLRKNSYRSFP 192
           A IEI  ++++ + D       ++I+ +F +   H+CIV  K GP L D++ K+   S  
Sbjct: 172 AKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKYGPCLLDWIMKHGPFSH- 230

Query: 193 IDLVRELGRQLLESVA----FMHELRLIHTDLKPENILLVSAEYVKVP 236
               R L + + ++      F  EL L+HTDLKPENIL+ +++ V  P
Sbjct: 231 ----RHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDP 274

Length = 467

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score =  105 bits (263), Expect = 7e-27
 Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK---IVRSINKYREAAMIEIDVLQRLARHD 149
           RY+IL ++GEG  G V +  D E  E VA+K   + R        A+ EI  LQ      
Sbjct: 1   RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPY 60

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           +     V++ + F + +   +V E +   L + LR +  R  P   V+   R LL+ VA+
Sbjct: 61  V-----VKLLDVFPHGSGFVLVMEYMPSDLSEVLR-DEERPLPEAQVKSYMRMLLKGVAY 114

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDY 238
           MH   ++H DLKP N+L+ +   +K+ D+
Sbjct: 115 MHANGIMHRDLKPANLLISADGVLKIADF 143

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score =  104 bits (261), Expect = 2e-26
 Identities = 44/147 (29%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREA-AMIEIDVLQRLARHDIG 151
           Y+++ ++G+GTFG V    + E  ELVAIK + +    + E   + E+  L++L  H   
Sbjct: 1   YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHP-- 58

Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               V+++  F   + +  VFE +  +LY  ++    + F   ++R +  Q+L+ +A +H
Sbjct: 59  --NIVKLKEVFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIH 116

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
           +    H DLKPEN+L+   E VK+ D+
Sbjct: 117 KHGFFHRDLKPENLLVSGPEVVKIADF 143

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 92.2 bits (230), Expect = 4e-22
 Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 13/149 (8%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARHD 149
           Y  L K+GEGT+G V +  D +  E+VA+K +R ++   E     A+ EI +L+ L +H 
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIR-LDNEEEGIPSTALREISLLKEL-KHP 58

Query: 150 -IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
            I     V++ +       + +VFE     L  +L K        +L++ +  QLL  +A
Sbjct: 59  NI-----VKLLDVIHTERKLYLVFEYCDMDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLA 112

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPD 237
           + H  R++H DLKP+NIL+     +K+ D
Sbjct: 113 YCHSHRILHRDLKPQNILINRDGVLKLAD 141

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 92.0 bits (229), Expect = 6e-22
 Identities = 46/149 (30%), Positives = 81/149 (54%), Gaps = 9/149 (6%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK---IVRSINKYREAAMIEIDVLQRLARHD 149
           +Y +L  +GEG +G V++C +    E+VAIK           ++ A+ E+ VL++L   +
Sbjct: 2   KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHEN 61

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           I     V ++  F  +  + +VFE +  +L + L  +     P D VR    QLL+++A+
Sbjct: 62  I-----VNLKEAFRRKGRLYLVFEYVERTLLELLEASPG-GLPPDAVRSYIWQLLQAIAY 115

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDY 238
            H   +IH D+KPENIL+  +  +K+ D+
Sbjct: 116 CHSHNIIHRDIKPENILVSESGVLKLCDF 144

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 91.2 bits (227), Expect = 1e-21
 Identities = 46/148 (31%), Positives = 82/148 (55%), Gaps = 9/148 (6%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHDI 150
           Y+ L K+GEGT+G V +  D    E+VAIK ++   +     + A+ EI +L+ L   +I
Sbjct: 1   YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNI 60

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                +++ + F ++  + +VFE +   LY  ++    R  P  L++    QLL+ +AF 
Sbjct: 61  -----IKLLDVFRHKGDLYLVFEFMDTDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFC 114

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H   ++H DLKPEN+L+ +   +K+ D+
Sbjct: 115 HSHGILHRDLKPENLLINTEGVLKLADF 142

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 87.1 bits (214), Expect = 9e-20
 Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 13/140 (9%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARHD 149
           YRIL K+GEG+FG+V    D +    VA+K++     S +K  E  + EI +L  L    
Sbjct: 2   YRILRKLGEGSFGEVYLARDRKL---VALKVLAKKLESKSKEVERFLREIQILASLNHPP 58

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYR-SFPIDLVRELGRQLLESV 207
                 V++ ++F     + +V E + G SL D L+K   +          +  Q+L ++
Sbjct: 59  ----NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSAL 114

Query: 208 AFMHELRLIHTDLKPENILL 227
            ++H   +IH D+KPENILL
Sbjct: 115 EYLHSKGIIHRDIKPENILL 134

Length = 384

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 84.5 bits (210), Expect = 2e-19
 Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 13/143 (9%)

Query: 101 GEGTFGQVVECFDNEKKELVAIK---IVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQ 157
           G G+FG V    D +  EL+A+K   +     +  EA   EI +L  L +H       V+
Sbjct: 9   GRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSL-QHP----NIVR 63

Query: 158 IR--NWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
                  + +N + I  E + G SL   L+K  +   P  ++R+  RQ+LE +A++H   
Sbjct: 64  YYGSERDEEKNTLNIFLEYVSGGSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHSNG 121

Query: 215 LIHTDLKPENILLVSAEYVKVPD 237
           ++H D+K  NIL+ S   VK+ D
Sbjct: 122 IVHRDIKGANILVDSDGVVKLAD 144

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 77.6 bits (192), Expect = 5e-17
 Identities = 42/147 (28%), Positives = 79/147 (53%), Gaps = 8/147 (5%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHDIGG 152
           + IL K+G+G FG+V +       + VAIK+++    + +E  + EI +L++    +I  
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNI-- 59

Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V+    +  ++ + IV E   G SL D L K++ ++     +  + ++LL+ + ++H
Sbjct: 60  ---VKYYGSYLKKDELWIVMEFCSGGSLKDLL-KSTNQTLTESQIAYVCKELLKGLEYLH 115

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
              +IH D+K  NILL S   VK+ D+
Sbjct: 116 SNGIIHRDIKAANILLTSDGEVKLIDF 142

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 77.6 bits (192), Expect = 9e-17
 Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 11/150 (7%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYR--EAAMIEIDVLQRLARHD 149
           ++    +GEG+F  VV   + E  +  AIKI+  R + K +  +   IE +VL RL  H 
Sbjct: 3   FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGH- 61

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                 +++   F    ++  V E      L  ++RK  Y S      R    ++L ++ 
Sbjct: 62  ---PGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLALE 116

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++H   +IH DLKPENILL    ++K+ D+
Sbjct: 117 YLHSKGIIHRDLKPENILLDKDMHIKITDF 146

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 75.7 bits (187), Expect = 4e-16
 Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 29/159 (18%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE---AAMIEIDVLQRLARHDI 150
           Y  ++++GEGT+GQV +  + +  ELVA+K +R  N+       A+ EI +LQ+L RH  
Sbjct: 1   YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKL-RHP- 58

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLY--------DF---LRKNSYRSFPIDLVREL 199
                V++           IV  K   S+Y        D    L     + F    ++  
Sbjct: 59  ---NIVRL---------KEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVK-FTESQIKCY 105

Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            +QLLE + ++H   ++H D+K  NIL+ +   +K+ D+
Sbjct: 106 MKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADF 144

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 75.2 bits (186), Expect = 5e-16
 Identities = 42/152 (27%), Positives = 79/152 (51%), Gaps = 11/152 (7%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD 149
           +Y I+ ++G+G+FG+V         +L  +K +   N   K RE A+ E+ +L++L  H 
Sbjct: 1   KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKL-NHP 59

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFL--RKNSYRSFPIDLVRELGRQLLES 206
                 ++    F+ +  +CIV E   G  L   +  +K   + FP + + +   QL  +
Sbjct: 60  ----NIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLA 115

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           + ++H  +++H D+KP+NI L S   VK+ D+
Sbjct: 116 LKYLHSRKILHRDIKPQNIFLTSNGLVKLGDF 147

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 75.5 bits (186), Expect = 5e-16
 Identities = 48/155 (30%), Positives = 84/155 (54%), Gaps = 21/155 (13%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK---------IVRSINKYREAAMIEIDVLQ 143
           +Y  LSK+GEG++G V +C + E  ++VAIK         +++ I      A+ EI +L+
Sbjct: 2   KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKI------ALREIRMLK 55

Query: 144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQL 203
           +L   ++     V +   F  +  + +VFE    ++ + L KN  R  P  L++++  Q 
Sbjct: 56  QLKHPNL-----VNLIEVFRRKRKLHLVFEYCDHTVLNELEKNP-RGVPEHLIKKIIWQT 109

Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           L++V F H+   IH D+KPENIL+     +K+ D+
Sbjct: 110 LQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDF 144

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 72.7 bits (179), Expect = 5e-15
 Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 20/158 (12%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE---AAMI-EIDVLQRLARH- 148
           Y  L+++GEG +G V +  D      VA+K VR      E    + + EI +L++L    
Sbjct: 1   YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFE 59

Query: 149 --------DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
                   D+    C   R   D    + +VFE +   L  +L K      P + +++L 
Sbjct: 60  HPNIVRLLDV----CHGPRT--DRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLM 113

Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           RQLL  V F+H  R++H DLKP+NIL+ S   VK+ D+
Sbjct: 114 RQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADF 151

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 72.7 bits (178), Expect = 5e-15
 Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 10/154 (6%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE---AAMIEIDVLQRLARHD 149
           +Y  ++++G G +G V +  D      VA+K VR          + + E+ +L+RL   D
Sbjct: 1   QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFD 60

Query: 150 IGGTR-----CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
                     C   R   D    + +VFE +   L  +L K      P + +++L RQ L
Sbjct: 61  HPNIVRLMDVCATSRT--DRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFL 118

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
             + F+H   ++H DLKPENIL+ S   VK+ D+
Sbjct: 119 RGLDFLHANCIVHRDLKPENILVTSGGQVKLADF 152

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 71.8 bits (176), Expect = 9e-15
 Identities = 44/145 (30%), Positives = 77/145 (53%), Gaps = 8/145 (5%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I   
Sbjct: 5   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI--- 61

Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++ +     N + +VFE L   L  F+  +     P+ L++    QLL+ +AF H  
Sbjct: 62  --VKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH 119

Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
           R++H DLKP+N+L+ +   +K+ D+
Sbjct: 120 RVLHRDLKPQNLLINTEGAIKLADF 144

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 71.1 bits (175), Expect = 1e-14
 Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 11/152 (7%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA---AMIEIDVLQRLARHD 149
            Y++   +G G FG V +  + E  + VAIK +       EA    M EID+L+ L   +
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPN 60

Query: 150 IGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I     V+     +  + + I+ E     SL   ++K  +  FP  LV     Q+L+ +A
Sbjct: 61  I-----VKYIGSIETSDSLYIILEYAENGSLRQIIKK--FGPFPESLVAVYVYQVLQGLA 113

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           ++HE  +IH D+K  NIL      VK+ D+ V
Sbjct: 114 YLHEQGVIHRDIKAANILTTKDGVVKLADFGV 145

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 70.8 bits (173), Expect = 3e-14
 Identities = 41/149 (27%), Positives = 84/149 (56%), Gaps = 9/149 (6%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD 149
           ++ +L  +GEG +G V++C   E KE+VAIK  +      + +E  + E+ +L+ L + +
Sbjct: 2   KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQEN 61

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           I     V+++  F  R  + +VFE +  ++ + L +      P + VR    QL++++ +
Sbjct: 62  I-----VELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPP-EKVRSYIYQLIKAIHW 115

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDY 238
            H+  ++H D+KPEN+L+   + +K+ D+
Sbjct: 116 CHKNDIVHRDIKPENLLISHNDVLKLCDF 144

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 70.0 bits (172), Expect = 4e-14
 Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 15/141 (10%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI----EIDVLQRLARHD 149
           Y+IL K+GEGTF +V++    +  +  AIK       ++    +    EI  L+RL+ H 
Sbjct: 1   YKILGKIGEGTFSEVLKAQSRKTGKYYAIK--CMKKHFKSLEQVNNLREIQALRRLSPHP 58

Query: 150 --IGGTRCVQIRNWFDYR-NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
             +     +     FD +   + +VFE +  +LY+ + K   R  P   V+    QLL+S
Sbjct: 59  NILRLIEVL-----FDRKTGRLALVFELMDMNLYELI-KGRKRPLPEKRVKSYMYQLLKS 112

Query: 207 VAFMHELRLIHTDLKPENILL 227
           +  MH   + H D+KPENIL+
Sbjct: 113 LDHMHRNGIFHRDIKPENILI 133

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 69.7 bits (171), Expect = 5e-14
 Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 13/151 (8%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI----EIDVLQRLARH 148
           R++  +K+G GTFG+V    + +  EL+A+K +R I       +     E+ VL+ L   
Sbjct: 1   RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIR-IQDNDPKTIKEIADEMKVLELLKHP 59

Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           ++     V++     +R  + I  E   G +L + L     R     ++R    QLLE +
Sbjct: 60  NLVKYYGVEV-----HREKVYIFMEYCSGGTLEELLEHG--RILDEHVIRVYTLQLLEGL 112

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           A++H   ++H D+KP NI L     +K+ D+
Sbjct: 113 AYLHSHGIVHRDIKPANIFLDHNGVIKLGDF 143

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 68.2 bits (167), Expect = 2e-13
 Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 18/171 (10%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--IVRSINKY-REAAMIEIDVLQRLARHD 149
           +Y  L  +GEG++G V++C   E  ++VAIK  +    +K  ++ AM EI +L++L RH+
Sbjct: 2   KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQL-RHE 60

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                 V +   F  +  + +VFE +  ++ D L K          VR+   Q+L  + F
Sbjct: 61  ----NLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYP-NGLDESRVRKYLFQILRGIEF 115

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLSMASRVY 260
            H   +IH D+KPENIL+  +  VK+ D         F F   L+    VY
Sbjct: 116 CHSHNIIHRDIKPENILVSQSGVVKLCD---------FGFARTLAAPGEVY 157

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 68.4 bits (168), Expect = 2e-13
 Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 14/153 (9%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA------AMIEIDVLQRLA 146
           RY    K+GEGT+  V +  D E   +VAIK ++   +          A+ EI +LQ L 
Sbjct: 1   RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL- 59

Query: 147 RHD-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           +H  I G   V     F ++++I +VFE +   L   ++  S    P D ++      L 
Sbjct: 60  KHPNIIGLLDV-----FGHKSNINLVFEFMETDLEKVIKDKSIVLTPAD-IKSYMLMTLR 113

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            + ++H   ++H DLKP N+L+ S   +K+ D+
Sbjct: 114 GLEYLHSNWILHRDLKPNNLLIASDGVLKLADF 146

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 67.5 bits (165), Expect = 2e-13
 Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 13/152 (8%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSIN-KYREAAMIEIDVLQRLARHD 149
            +++L K+G+G++G V +       +  A+K V   S++ K RE A+ EI +L  +   +
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60

Query: 150 IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSY--RSFPIDLVRELGRQLLE 205
           I     +  +  F   N +CIV E    G  L   + K     +  P   +  +  QLL 
Sbjct: 61  I-----ISYKEAFLDGNKLCIVMEYAPFG-DLSKAISKRKKKRKLIPEQEIWRIFIQLLR 114

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            +  +HE +++H DLK  NILLV+ + VK+ D
Sbjct: 115 GLQALHEQKILHRDLKSANILLVANDLVKIGD 146

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 66.4 bits (162), Expect = 6e-13
 Identities = 45/146 (30%), Positives = 72/146 (49%), Gaps = 14/146 (9%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV------RSINKYREAAMIEIDVLQRLARHDIGGT 153
           +G+G FG+V  C+D +    +A+K V          K   A   EI +L+ L +H+    
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-QHE---- 64

Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
           R VQ          + I  E + G S+ D L+  +Y +    + R+  RQ+LE V ++H 
Sbjct: 65  RIVQYYGCLRDDETLSIFMEYMPGGSVKDQLK--AYGALTETVTRKYTRQILEGVEYLHS 122

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDY 238
             ++H D+K  NIL  SA  VK+ D+
Sbjct: 123 NMIVHRDIKGANILRDSAGNVKLGDF 148

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 66.0 bits (162), Expect = 8e-13
 Identities = 36/156 (23%), Positives = 64/156 (41%), Gaps = 24/156 (15%)

Query: 95  RILSKMGEGTFGQVVECF----DNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLARH 148
            +  K+GEG FG+V +       + K+  VA+K ++     ++      E  ++++L  H
Sbjct: 2   TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKL-DH 60

Query: 149 D-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGR 201
                 +G   C +          + IV E    G  L D+LRKN  +   +  +     
Sbjct: 61  PNIVKLLGV--CTE-------EEPLMIVMEYMPGG-DLLDYLRKNRPKELSLSDLLSFAL 110

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           Q+   + ++     IH DL   N L+     VK+ D
Sbjct: 111 QIARGMEYLESKNFIHRDLAARNCLVGENLVVKISD 146

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 66.2 bits (161), Expect = 1e-12
 Identities = 49/177 (27%), Positives = 90/177 (50%), Gaps = 14/177 (7%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVLQRLARHDIGG 152
           + I+ ++G+G FG+V +  + E   L A K++ + ++   E  M+EID+L      +I  
Sbjct: 7   WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI-- 64

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
              V++ + F Y N++ I+ E       D +     R      +R + +Q LE++ ++HE
Sbjct: 65  ---VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHE 121

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQ---TFLS----MASRVYIC 262
            ++IH DLK  NIL      +K+ D+ V S ++  + Q   +F+     MA  V +C
Sbjct: 122 NKIIHRDLKAGNILFTLDGDIKLADFGV-SAKNTRTIQRRDSFIGTPYWMAPEVVMC 177

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 66.0 bits (161), Expect = 1e-12
 Identities = 41/148 (27%), Positives = 78/148 (52%), Gaps = 8/148 (5%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHDIG 151
           ++ L K+GEGT+  V +  +    E+VA+K +   +       A+ EI +++ L   +I 
Sbjct: 2   FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENI- 60

Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYR-SFPIDLVRELGRQLLESVAFM 210
               V++ +     N + +VFE +   L  ++  +  R +   + V+    QLL+ +AF 
Sbjct: 61  ----VRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFC 116

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           HE R++H DLKP+N+L+     +K+ D+
Sbjct: 117 HENRVLHRDLKPQNLLINKRGELKLADF 144

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 65.5 bits (160), Expect = 2e-12
 Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 17/157 (10%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRLARH 148
           +Y  L+K+G+GTFG+V +    + K++VA+K V   N+ +E     A+ EI +LQ L +H
Sbjct: 13  KYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE-KEGFPITALREIKILQLL-KH 70

Query: 149 D-------IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGR 201
           +       I  T+         Y+    +VFE     L   L  N    F +  ++++ +
Sbjct: 71  ENVVNLIEICRTKATPYNR---YKGSFYLVFEFCEHDLAGLL-SNKNVKFTLSEIKKVMK 126

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            LL  + ++H  +++H D+K  NIL+     +K+ D+
Sbjct: 127 MLLNGLYYIHRNKILHRDMKAANILITKDGILKLADF 163

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 64.9 bits (159), Expect = 3e-12
 Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 25/158 (15%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR----LARH 148
            + +L  +G+G+FG+V +  D    ++VAIK++       E A  EI+ +Q+    L+  
Sbjct: 2   LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVID-----LEEAEDEIEDIQQEIQFLS-- 54

Query: 149 DIGGTRCVQIRNWF-----DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQ 202
                R   I  ++       +  + I+ E   G S  D L+           +  + R+
Sbjct: 55  ---QCRSPYITKYYGSFLKGSK--LWIIMEYCGGGSCLDLLK---PGKLDETYIAFILRE 106

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           +L  + ++HE   IH D+K  NILL     VK+ D+ V
Sbjct: 107 VLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGV 144

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 65.2 bits (159), Expect = 3e-12
 Identities = 48/163 (29%), Positives = 86/163 (52%), Gaps = 15/163 (9%)

Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVL 142
           G+    ++ I+ ++GEGT+GQV +  D +  ELVA+K VR  N+ +E     A+ EI +L
Sbjct: 2   GKRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKIL 60

Query: 143 QRLARHDIGGTRCVQI----RNWFDYRNH---ICIVFEKLGPSLYDFLRKNSYRSFPIDL 195
           ++L   +I      +I    ++  D++       +VFE +   L   L ++    F  D 
Sbjct: 61  RQLNHRNI--VNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLL-ESGLVHFSEDH 117

Query: 196 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++   +QLLE + + H+   +H D+K  NILL +   +K+ D+
Sbjct: 118 IKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADF 160

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 65.3 bits (160), Expect = 3e-12
 Identities = 52/172 (30%), Positives = 84/172 (48%), Gaps = 40/172 (23%)

Query: 86  IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV-----------RSINKYREA 134
           I +++  +Y IL K+G+G +G V +  D   KE+VA+K +           R+   +RE 
Sbjct: 1   IDKHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRT---FRE- 56

Query: 135 AMIEIDVLQRLARHD-IGGTRCVQIRNWFDYRNH--ICIVFEKLGPSLYDFLRKNSYRSF 191
               I  LQ L  H  I     V++ N     N   I +VFE +   L+  +R N     
Sbjct: 57  ----IMFLQELGDHPNI-----VKLLNVIKAENDKDIYLVFEYMETDLHAVIRAN----- 102

Query: 192 PIDLVRELGR-----QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
              ++ ++ +     QLL+++ ++H   +IH DLKP NILL S   VK+ D+
Sbjct: 103 ---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADF 151

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 65.2 bits (159), Expect = 3e-12
 Identities = 49/160 (30%), Positives = 83/160 (51%), Gaps = 27/160 (16%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY-REAAMI--EIDVLQRLARH- 148
           RY+I   +G+G++G V    D    E VAIK +  + ++  +A  I  EI +L RL RH 
Sbjct: 1   RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLL-RLLRHP 59

Query: 149 DIGGTRCVQIRNWF------DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGR- 201
           DI     V+I++        ++++ I +VFE +   L+  ++ N       DL  E  + 
Sbjct: 60  DI-----VEIKHIMLPPSRREFKD-IYVVFELMESDLHQVIKAND------DLTPEHHQF 107

Query: 202 ---QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
              QLL ++ ++H   + H DLKP+NIL  +   +K+ D+
Sbjct: 108 FLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDF 147

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 65.1 bits (159), Expect = 3e-12
 Identities = 47/146 (32%), Positives = 70/146 (47%), Gaps = 9/146 (6%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI----EIDVLQRLARHDIGG 152
           L+++GEGT+G V    D    E+VA+K VR ++  R+   I    EI +L  L   +I  
Sbjct: 12  LNRIGEGTYGIVYRARDTTSGEIVALKKVR-MDNERDGIPISSLREITLLLNLRHPNIVE 70

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            + V +    D    I +V E     L   L  N    F    V+ L  QLL  + ++HE
Sbjct: 71  LKEVVVGKHLD---SIFLVMEYCEQDLASLL-DNMPTPFSESQVKCLMLQLLRGLQYLHE 126

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDY 238
             +IH DLK  N+LL     +K+ D+
Sbjct: 127 NFIIHRDLKVSNLLLTDKGCLKIADF 152

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 64.6 bits (158), Expect = 4e-12
 Identities = 44/165 (26%), Positives = 82/165 (49%), Gaps = 17/165 (10%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRLARHD 149
           Y  L+++ EGT+G V    D +  E+VA+K ++ + K +E     ++ EI++L +L +H 
Sbjct: 7   YEKLNRIEEGTYGVVYRARDKKTGEIVALKKLK-MEKEKEGFPITSLREINILLKL-QHP 64

Query: 150 IGGTRCVQIRNWF--DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
                 V ++        + I +V E +   L   + +   + F    V+ L  QLL  V
Sbjct: 65  ----NIVTVKEVVVGSNLDKIYMVMEYVEHDLKSLM-ETMKQPFLQSEVKCLMLQLLSGV 119

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY----KVPSPRHAFS 248
           A +H+  ++H DLK  N+LL +   +K+ D+    +  SP   ++
Sbjct: 120 AHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYT 164

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 63.9 bits (156), Expect = 6e-12
 Identities = 44/149 (29%), Positives = 77/149 (51%), Gaps = 10/149 (6%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRLARHD 149
           Y+ + K+GEGT+G V +  D    E+VA+K +R +    E     A+ EI +L+ L  H 
Sbjct: 1   YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIR-LETEDEGVPSTAIREISLLKEL-NHP 58

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                 V++ +     N + +VFE L   L  ++  +        L++    QLL+ +A+
Sbjct: 59  ----NIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAY 114

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDY 238
            H  R++H DLKP+N+L+     +K+ D+
Sbjct: 115 CHSHRVLHRDLKPQNLLIDREGALKLADF 143

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 63.9 bits (155), Expect = 7e-12
 Identities = 45/177 (25%), Positives = 88/177 (49%), Gaps = 14/177 (7%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVLQRLARHDIGG 152
           + I+ ++G+G FG+V +  + E   L A K++ + ++   E  M+EI++L       I  
Sbjct: 14  WEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYI-- 71

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
              V++   F +   + I+ E       D +     R      ++ + RQ+LE++ ++H 
Sbjct: 72  ---VKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHS 128

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQ---TFLS----MASRVYIC 262
           +++IH DLK  N+LL     +K+ D+ V S ++  + Q   +F+     MA  V +C
Sbjct: 129 MKIIHRDLKAGNVLLTLDGDIKLADFGV-SAKNVKTLQRRDSFIGTPYWMAPEVVMC 184

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 63.3 bits (154), Expect = 9e-12
 Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 9/142 (6%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR---EAAMIEIDVLQRLARHDI 150
           Y  L K+GEGT+G+V +  D    +LVA+K  R           A+ EI +LQ L+   I
Sbjct: 3   YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLS-ESI 61

Query: 151 GGTRCVQIRNWFDYRNHICI--VFEKLGPSLYDFL---RKNSYRSFPIDLVRELGRQLLE 205
              R + + +  +      +  VFE L   L  F+    +   R  P   ++    QLL+
Sbjct: 62  YIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLK 121

Query: 206 SVAFMHELRLIHTDLKPENILL 227
            VA  H+  ++H DLKP+N+L+
Sbjct: 122 GVAHCHKHGVMHRDLKPQNLLV 143

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 63.0 bits (154), Expect = 1e-11
 Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 15/150 (10%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           Y+ L K+GEG  G+V +  D    + VAIK +R   + +E  + EI +++     +I   
Sbjct: 21  YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNI--- 77

Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRE----LGRQLLESVA 208
             V   + +   + + +V E + G SL D + +N      + +       + R++L+ + 
Sbjct: 78  --VDYYDSYLVGDELWVVMEYMDGGSLTDIITQN-----FVRMNEPQIAYVCREVLQGLE 130

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++H   +IH D+K +NILL     VK+ D+
Sbjct: 131 YLHSQNVIHRDIKSDNILLSKDGSVKLADF 160

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 62.6 bits (153), Expect = 2e-11
 Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 11/150 (7%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKI--VRSINKYREAAMIEIDVLQRLARHDIGG 152
             +  +G+G+ G V +       ++ A+K   V    ++R+  + E+  L+      +  
Sbjct: 4   ERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYV-- 61

Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V+    F     I IV E + G SL D L+K      P  ++  + RQ+L+ + ++H
Sbjct: 62  ---VKCYGAFYKEGEISIVLEYMDGGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLH 116

Query: 212 -ELRLIHTDLKPENILLVSAEYVKVPDYKV 240
            +  +IH D+KP N+L+ S   VK+ D+ +
Sbjct: 117 TKRHIIHRDIKPSNLLINSKGEVKIADFGI 146

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 62.4 bits (152), Expect = 2e-11
 Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 14/146 (9%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI------EIDVLQRLARHDIGGT 153
           +G G+FG V E  + +  +  A+K V   +  +           EI +L +L   +I   
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNI--- 64

Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
             VQ        +++ I  E + G SL   L+K  Y SFP  ++R   RQ+L  + ++H+
Sbjct: 65  --VQYLGTEREEDNLYIFLELVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHD 120

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDY 238
              +H D+K  NIL+ +   VK+ D+
Sbjct: 121 RNTVHRDIKGANILVDTNGVVKLADF 146

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 61.8 bits (151), Expect = 3e-11
 Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 12/143 (8%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMI--EIDVLQRLARHDIGGTRCV 156
           G+G+FG+V+     +  +L A+K+++   I K +E      E ++L R+  H       V
Sbjct: 2   GKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRI-NHPF----IV 56

Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F     + +V E   G  L+  L K     F  +  R    +++ ++ ++H L +
Sbjct: 57  KLHYAFQTEEKLYLVLEYAPGGELFSHLSK--EGRFSEERARFYAAEIVLALEYLHSLGI 114

Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           I+ DLKPENILL +  ++K+ D+
Sbjct: 115 IYRDLKPENILLDADGHIKLTDF 137

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 61.9 bits (150), Expect = 3e-11
 Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 16/172 (9%)

Query: 93  RYRILSKMGEGTFGQVVECFD-NEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLAR 147
           +Y  ++++GEG +G+V +  D       VA+K VR +    E    + + E+ VL+ L  
Sbjct: 2   QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEEGMPLSTIREVAVLRHLET 60

Query: 148 HDIGGTR-----CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
            +          C   R   D    + +VFE +   L  +L K      P + ++++  Q
Sbjct: 61  FEHPNVVRLFDVCTVSRT--DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 118

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLS 254
           LL  + F+H  R++H DLKP+NIL+ S+  +K+ D+ +      +SFQ  L+
Sbjct: 119 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA---RIYSFQMALT 167

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 61.8 bits (150), Expect = 3e-11
 Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 18/152 (11%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVR-----SINKYREAAMI-----EIDVLQRLARHD 149
           +G G+FG V    +    EL+A+K V      + +K R+ +M+     EI +L+ L   +
Sbjct: 8   IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I     VQ        +H+ I  E + G S+   L  N+Y +F   LVR   RQ+L+ + 
Sbjct: 68  I-----VQYLGSSLDADHLNIFLEYVPGGSVAALL--NNYGAFEETLVRNFVRQILKGLN 120

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           ++H   +IH D+K  NIL+ +   +K+ D+ +
Sbjct: 121 YLHNRGIIHRDIKGANILVDNKGGIKISDFGI 152

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 62.3 bits (152), Expect = 3e-11
 Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 5/153 (3%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRL 145
            ++ PRY+ LS +GEG +G V           VAIK +       + +  + EI +L+R 
Sbjct: 1   FDVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRF 60

Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
              +I G   +     F+  N + IV E +   LY  ++     +   D ++    Q+L 
Sbjct: 61  KHENIIGILDIIRPPSFESFNDVYIVQELMETDLYKLIKTQHLSN---DHIQYFLYQILR 117

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            + ++H   ++H DLKP N+LL +   +K+ D+
Sbjct: 118 GLKYIHSANVLHRDLKPSNLLLNTNCDLKICDF 150

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 61.4 bits (150), Expect = 3e-11
 Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 25/156 (16%)

Query: 95  RILSKMGEGTFGQVVECF----DNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARH 148
            +  K+GEG FG+V +          +  VA+K ++  +  + RE  + E  ++++L  H
Sbjct: 2   ELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKL-SH 60

Query: 149 D-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGR 201
                 +G   C Q          + IV E    G  L DFLRK+      +  + ++  
Sbjct: 61  PNIVRLLGV--CTQ-------GEPLYIVTEYMPGG-DLLDFLRKHG-EKLTLKDLLQMAL 109

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           Q+ + + ++     +H DL   N L+     VK+ D
Sbjct: 110 QIAKGMEYLESKNFVHRDLAARNCLVTENLVVKISD 145

Length = 258

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 61.2 bits (149), Expect = 5e-11
 Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 17/169 (10%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLARHDI 150
            Y ++ ++G GT+G V +  D    ELVAIK++  +    +  +I  EI +L+   RH  
Sbjct: 4   DYELIQRIGSGTYGDVYKARDIATGELVAIKVI-KLEPGDDFEIIQQEISMLKE-CRHP- 60

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                V     +  R+ + IV E   G SL D  +           +  + R+ L+ +A+
Sbjct: 61  ---NIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAY 116

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLSMASR 258
           +HE   IH D+K  NILL     VK+ D+ V       S Q   ++A R
Sbjct: 117 LHETGKIHRDIKGANILLTEDGDVKLADFGV-------SAQLTATIAKR 158

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 60.9 bits (148), Expect = 6e-11
 Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 16/184 (8%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA--MIEIDVLQRL 145
            N    + I+ ++G+G FG+V +    E     A KI++ I    E    M+EID+L   
Sbjct: 1   VNPNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQ-IESEEELEDFMVEIDILSEC 59

Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
            +H       V +   + Y N + I+ E       D +     R      +R + RQ+LE
Sbjct: 60  -KHP----NIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLE 114

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQ---TFLS----MASR 258
           ++ F+H  ++IH DLK  NILL     VK+ D+ V S ++  + Q   TF+     MA  
Sbjct: 115 ALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGV-SAKNKSTLQKRDTFIGTPYWMAPE 173

Query: 259 VYIC 262
           V  C
Sbjct: 174 VVAC 177

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 60.2 bits (147), Expect = 8e-11
 Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 25/156 (16%)

Query: 95  RILSKMGEGTFGQVVECF----DNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARH 148
            +  K+GEG FG+V +        +KK  VA+K ++  +  +  E  + E  ++++L  H
Sbjct: 2   TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKL-DH 60

Query: 149 D-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGR 201
                 +G   C +          + IV E  + G  L  +LRKN  +    DL+     
Sbjct: 61  PNVVKLLGV--CTE-------EEPLYIVMEYMEGG-DLLSYLRKNRPKLSLSDLL-SFAL 109

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           Q+   + ++     IH DL   N L+     VK+ D
Sbjct: 110 QIARGMEYLESKNFIHRDLAARNCLVGENLVVKISD 145

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 60.1 bits (146), Expect = 1e-10
 Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 13/151 (8%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARH 148
           +Y  L K+GEGT+G V +  + E  E+VA+K VR ++   E    +A+ EI +L+ L   
Sbjct: 1   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR-LDDDDEGVPSSALREICLLKELKHK 59

Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK-NSYRSFPIDLVRELGRQLLESV 207
           +I     V++ +       + +VFE     L  +    N      I  V+    QLL+ +
Sbjct: 60  NI-----VRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEI--VKSFMFQLLKGL 112

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           AF H   ++H DLKP+N+L+     +K+ D+
Sbjct: 113 AFCHSHNVLHRDLKPQNLLINKNGELKLADF 143

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 58.8 bits (143), Expect = 3e-10
 Identities = 34/141 (24%), Positives = 69/141 (48%), Gaps = 12/141 (8%)

Query: 103 GTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRLARHDIGGTRCVQI 158
           G +G+V         ++ AIK+++  +  R+      + E D+L +     +     V++
Sbjct: 4   GAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYV-----VKL 58

Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
              F  + ++ +V E L G  L   L   +  S   D+ R    +++ ++ ++H   +IH
Sbjct: 59  YYSFQGKKNLYLVMEYLPGGDLASLLE--NVGSLDEDVARIYIAEIVLALEYLHSNGIIH 116

Query: 218 TDLKPENILLVSAEYVKVPDY 238
            DLKP+NIL+ S  ++K+ D+
Sbjct: 117 RDLKPDNILIDSNGHLKLTDF 137

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 58.4 bits (142), Expect = 4e-10
 Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 23/170 (13%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           + IL K+GEG++G V +    E  ++VAIK+V  + +  +  + EI +L++         
Sbjct: 5   FDILEKLGEGSYGSVYKAIHKETGQVVAIKVV-PVEEDLQEIIKEISILKQ--------C 55

Query: 154 RCVQIRNWFD---YRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
               I  ++        + IV E    G S+ D ++  + ++   + +  +  Q L+ + 
Sbjct: 56  DSPYIVKYYGSYFKNTDLWIVMEYCGAG-SVSDIMKITN-KTLTEEEIAAILYQTLKGLE 113

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLSMASR 258
           ++H  + IH D+K  NILL      K+ D+ V       S Q   +MA R
Sbjct: 114 YLHSNKKIHRDIKAGNILLNEEGQAKLADFGV-------SGQLTDTMAKR 156

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 58.4 bits (142), Expect = 4e-10
 Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 25/163 (15%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
            + ++  +GEGT+G+V +    +  +LVAIKI+  I    E    E ++L++ + H    
Sbjct: 7   IFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNH---- 62

Query: 153 TRCVQIRNWFDY------RNHIC------IVFEKL-GPSLYDFLR--KNSYRSFPIDLVR 197
                  N   +      +N         +V E   G S+ D ++  +   +    + + 
Sbjct: 63  ------PNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIA 116

Query: 198 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
            + R+ L  +A++HE ++IH D+K +NILL     VK+ D+ V
Sbjct: 117 YILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGV 159

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 57.5 bits (139), Expect = 9e-10
 Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 9/152 (5%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK---IVRSINKYREAAMIEIDVLQRLARHD 149
           +Y  + K+GEG+FG+ +     E  +   IK   I +   K RE +  E+ VL  +   +
Sbjct: 1   KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPN 60

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I     VQ +  F+   ++ IV +   G  LY  +       FP D + +   Q+  ++ 
Sbjct: 61  I-----VQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALK 115

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
            +H+ +++H D+K +NI L     +K+ D+ +
Sbjct: 116 HVHDRKILHRDIKSQNIFLTKDGTIKLGDFGI 147

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 57.4 bits (139), Expect = 9e-10
 Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 13/151 (8%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR---EAAMIEIDVLQRLARHDI 150
           Y  + K+GEGT+G V +  + +  ++VA+K +R  ++       A+ EI +L+ L   +I
Sbjct: 2   YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNI 61

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSL---YDFLRKNSYRSFPIDLVRELGRQLLESV 207
                V +++     + + ++FE L   L    D L K  Y     +LV+    Q+L+ +
Sbjct: 62  -----VCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQY--MDAELVKSYLYQILQGI 114

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            F H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 115 LFCHSRRVLHRDLKPQNLLIDNKGVIKLADF 145

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 57.4 bits (139), Expect = 1e-09
 Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 19/153 (12%)

Query: 97  LSKMGEGTFGQVVEC----FDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHDI 150
           + ++GEG FG+V  C      +   E VA+K +      ++R     EI++L+ L   +I
Sbjct: 9   IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENI 68

Query: 151 GGTRCVQIRNWFD--YRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVREL--GRQLLE 205
                V+ +   +      + ++ E L   SL D+L+++  +   I+L R L    Q+ +
Sbjct: 69  -----VKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQ---INLKRLLLFSSQICK 120

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            + ++   R IH DL   NIL+ S + VK+ D+
Sbjct: 121 GMDYLGSQRYIHRDLAARNILVESEDLVKISDF 153

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 56.7 bits (137), Expect = 1e-09
 Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 9/151 (5%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSIN-KYREAAMIEIDVLQRLARHDI 150
           + IL+K+G+G+FG V +      K + A+K +    +N + RE A+ E  VL +L    I
Sbjct: 2   FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYI 61

Query: 151 GGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                ++    F  +  + IV E      L+  L+    R  P D V     Q+L  +A 
Sbjct: 62  -----IRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAH 116

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           +H  +++H D+K  N+ L + + VK+ D  V
Sbjct: 117 LHSKKILHRDIKSLNLFLDAYDNVKIGDLGV 147

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 16/158 (10%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRCV 156
           G G FG+V       K    A+K V  R I +  +   I  E ++L+    H       V
Sbjct: 2   GVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILE-ECNHPF----IV 56

Query: 157 QIRNWFDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F  + +I ++ E  LG  L+  LR      F     R     ++ +  ++H   +
Sbjct: 57  KLYRTFKDKKYIYMLMEYCLGGELWTILRDRG--LFDEYTARFYIACVVLAFEYLHNRGI 114

Query: 216 IHTDLKPENILLVSAEYVKVPDY----KVPSPRHAFSF 249
           I+ DLKPEN+LL S  YVK+ D+    K+ S +  ++F
Sbjct: 115 IYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTF 152

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 56.7 bits (137), Expect = 2e-09
 Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 16/153 (10%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARHD 149
           ++I  K+G+G F  V +        +VA+K V+       K R+  + EID+L++L   +
Sbjct: 4   FKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPN 63

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLR-----KNSYRSFPIDLVRELGRQLL 204
           +     ++    F   N + IV E L  +  D  R     K   R  P   + +   QL 
Sbjct: 64  V-----IKYLASFIENNELNIVLE-LADA-GDLSRMIKHFKKQKRLIPERTIWKYFVQLC 116

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            ++  MH  R++H D+KP N+ + +   VK+ D
Sbjct: 117 SALEHMHSKRIMHRDIKPANVFITATGVVKLGD 149

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 56.8 bits (137), Expect = 2e-09
 Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 11/145 (7%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           Y ++  +  G+ G+V       + + V +KI +     +   +IE  +LQ +    +   
Sbjct: 68  YTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQ-----KGTTLIEAMLLQNVNHPSV--- 119

Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             +++++        C+V       LY +L K S R  PID    + +Q+LE + ++H  
Sbjct: 120 --IRMKDTLVSGAITCMVLPHYSSDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQ 176

Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
           R+IH D+K ENI +   + V + D 
Sbjct: 177 RIIHRDVKTENIFINDVDQVCIGDL 201

Length = 357

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 56.4 bits (137), Expect = 2e-09
 Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 23/157 (14%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--------YREAAMIEIDVLQR 144
           RY +L  +G G +G V    D      VAIK + ++           RE     I +L+ 
Sbjct: 1   RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILRE-----IKLLRH 55

Query: 145 LARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGR--- 201
           L   +I G   +      +  N + IV E +   L+  ++       P  L  +  +   
Sbjct: 56  LRHENIIGLLDILRPPSPEDFNDVYIVTELMETDLHKVIKS------PQPLTDDHIQYFL 109

Query: 202 -QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            Q+L  + ++H   +IH DLKP NIL+ S   +K+ D
Sbjct: 110 YQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICD 146

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 56.0 bits (136), Expect = 3e-09
 Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 14/151 (9%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHD 149
           +  +  +G G+FG+V+        +  A+KI+    I K ++   +  E  +LQ + RH 
Sbjct: 3   FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI-RHP 61

Query: 150 IGGTRCVQIRNWF-DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
                 V +   F D  N + +V E + G  L+  LRK+    FP  + R    Q++ ++
Sbjct: 62  F----LVNLYGSFQDDSN-LYLVMEYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLAL 114

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            ++H L +++ DLKPEN+LL S  Y+K+ D+
Sbjct: 115 EYLHSLDIVYRDLKPENLLLDSDGYIKITDF 145

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 55.4 bits (133), Expect = 4e-09
 Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 16/154 (10%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR------SINKYREAAMIEIDVLQRLAR 147
           +R+   +G+G FG+V  C+D +    +A+K V+        +K   A   EI +L+ L  
Sbjct: 4   WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLH 63

Query: 148 HDIGGTRCVQIRNWF-DYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLL 204
                 R VQ      D       +F +  P  S+ D L+  SY +   ++ R+  RQ+L
Sbjct: 64  E-----RIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLK--SYGALTENVTRKYTRQIL 116

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           E V+++H   ++H D+K  NIL  S   VK+ D+
Sbjct: 117 EGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDF 150

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 55.6 bits (134), Expect = 5e-09
 Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 12/144 (8%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHDIGGTRC 155
           +G+GTFG+V+   +    +  A+KI++   I    E A  + E  VLQ   RH       
Sbjct: 3   LGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQN-TRHPF----L 57

Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
             ++  F   + +C V E   G  L+  L +   R F  D  R  G +++ ++ ++H   
Sbjct: 58  TALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSCD 115

Query: 215 LIHTDLKPENILLVSAEYVKVPDY 238
           +++ DLK EN++L    ++K+ D+
Sbjct: 116 VVYRDLKLENLMLDKDGHIKITDF 139

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 54.8 bits (132), Expect = 6e-09
 Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 9/150 (6%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHD 149
            Y  +  +G+G FG+       E   LV  K V   R   K R  A+ EI +L  L   +
Sbjct: 1   HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPN 60

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I     +   N F   N + I  E   G +LYD + +   + F  ++V     Q++ +V+
Sbjct: 61  I-----IAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVS 115

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++H+  ++H D+K  NI L  A  +K+ D+
Sbjct: 116 YIHKAGILHRDIKTLNIFLTKAGLIKLGDF 145

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 55.2 bits (133), Expect = 6e-09
 Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 21/152 (13%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKY-------REAAMI-----EIDVLQRLAR 147
           +G+GT+G+V    +    E++A+K V  +          R+  M+     EI+ L+ L  
Sbjct: 9   IGKGTYGRVYLALNVTTGEMMAVKQVE-LPATIAGRHDSRQKDMVKALRSEIETLKDLDH 67

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
            +I     VQ   +     ++ I  E + G S+   LR   Y  F   LVR    Q+LE 
Sbjct: 68  LNI-----VQYLGFETTEEYLSIFLEYVPGGSIGSCLRT--YGRFEEQLVRFFTEQVLEG 120

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +A++H   ++H DLK +N+L+ +    K+ D+
Sbjct: 121 LAYLHSKGILHRDLKADNLLVDADGICKISDF 152

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 55.1 bits (132), Expect = 7e-09
 Identities = 41/161 (25%), Positives = 80/161 (49%), Gaps = 12/161 (7%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE--AAMIEIDVLQRLARHDIG 151
           Y  L K+GEG++  V +       +LVA+K++R   +      A+ E  +L+ L   +I 
Sbjct: 7   YEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANI- 65

Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               V + +    +  + +VFE +   L  ++ K+     P + V+    QLL  ++++H
Sbjct: 66  ----VLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHP-ENVKLFLFQLLRGLSYIH 120

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKVPS----PRHAFS 248
           +  ++H DLKP+N+L+     +K+ D+ +      P H +S
Sbjct: 121 QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYS 161

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 55.0 bits (132), Expect = 7e-09
 Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 23/162 (14%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           + ++  +G GT+GQV +    +  +L AIK++       E   +EI++L++ + H     
Sbjct: 18  FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHH----- 72

Query: 154 RCVQIRNWFDY------------RNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELG 200
                RN   Y             + + +V E  G  S+ D ++     +   D +  + 
Sbjct: 73  -----RNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYIC 127

Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           R++L  +A +H  ++IH D+K +N+LL     VK+ D+ V +
Sbjct: 128 REILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 169

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 54.6 bits (131), Expect = 8e-09
 Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 15/157 (9%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREA--AMIEIDVLQRLA 146
           RY +  ++G+G+FG V    D +      +K+++ I        E   A  E  +L +L 
Sbjct: 1   RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLD 60

Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLR--KNSYRSFPIDLVRELGRQL 203
              I     V+    F  R+  CI+ E   G  L   L   K++ ++   + V E   QL
Sbjct: 61  HPAI-----VKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQL 115

Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           L  V +MH+ R++H DLK +NI L     +K+ D+ V
Sbjct: 116 LLGVHYMHQRRILHRDLKAKNIFL-KNNLLKIGDFGV 151

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 54.8 bits (132), Expect = 9e-09
 Identities = 36/138 (26%), Positives = 76/138 (55%), Gaps = 15/138 (10%)

Query: 93  RYRILSKMGEGTFGQVVECF---DNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD 149
           +Y ILS +  G+ G+V  C    D ++K++    IV+++   +     EID+L+ ++   
Sbjct: 93  QYNILSSLTPGSEGEVFVCTKHGDEQRKKV----IVKAVTGGKTPGR-EIDILKTISHRA 147

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           I     + + + + +++ +C+V  K    L+ ++ ++     P++    + R+LLE++A+
Sbjct: 148 I-----INLIHAYRWKSTVCMVMPKYKCDLFTYVDRSG--PLPLEQAITIQRRLLEALAY 200

Query: 210 MHELRLIHTDLKPENILL 227
           +H   +IH D+K ENI L
Sbjct: 201 LHGRGIIHRDVKTENIFL 218

Length = 392

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 54.4 bits (131), Expect = 1e-08
 Identities = 38/173 (21%), Positives = 72/173 (41%), Gaps = 29/173 (16%)

Query: 85  AIGENLTPRYRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI------ 137
            +  +++ RY      +GEGT+G+V + +D    ++VAIK V+ I +             
Sbjct: 1   NMSFSISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVK-IIEISNDVTKDRQLVG 59

Query: 138 ----------EIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK-- 185
                     E+ ++  +   +I G   V +   F     I +V + +     D L+K  
Sbjct: 60  MCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDF-----INLVMDIMA---SD-LKKVV 110

Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +         V+ +  Q+L  +  +H+   +H DL P NI + S    K+ D+
Sbjct: 111 DRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADF 163

Length = 335

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 54.2 bits (130), Expect = 2e-08
 Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 12/134 (8%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           + IL     G  G    C DN+  E V IK  +     R     E  +L+ +    I   
Sbjct: 94  FSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAINHPSI--- 145

Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             +Q++  F Y    C++  +    LY +L   + R+  I  +  + R +L ++ ++HE 
Sbjct: 146 --IQLKGTFTYNKFTCLILPRYKTDLYCYL--AAKRNIAICDILAIERSVLRAIQYLHEN 201

Query: 214 RLIHTDLKPENILL 227
           R+IH D+K ENI +
Sbjct: 202 RIIHRDIKAENIFI 215

Length = 391

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 53.7 bits (129), Expect = 2e-08
 Identities = 38/139 (27%), Positives = 72/139 (51%), Gaps = 10/139 (7%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRLARH 148
           +Y  + K+GEGT+G V +  D    E +A+K +R + +  E     A+ EI +L+ +   
Sbjct: 3   QYEKVEKIGEGTYGVVYKARDRVTNETIALKKIR-LEQEDEGVPSTAIREISLLKEMQHG 61

Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           +I     V++++       + +VFE L   L   +  +   +    L++    Q+L  +A
Sbjct: 62  NI-----VRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIA 116

Query: 209 FMHELRLIHTDLKPENILL 227
           + H  R++H DLKP+N+L+
Sbjct: 117 YCHSHRVLHRDLKPQNLLI 135

Length = 294

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 53.5 bits (129), Expect = 2e-08
 Identities = 41/148 (27%), Positives = 70/148 (47%), Gaps = 16/148 (10%)

Query: 99  KMGEGTFGQVVEC-FDNEKKEL--VAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGT 153
           K+G+G+FG V    +     ++  VA+K ++S       +  + E  ++  L   ++   
Sbjct: 2   KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENL--- 58

Query: 154 RCVQIRNWFDYRNH-ICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               IR +     H + +V E L P  SL D LRK++   F I  + +   Q+   + ++
Sbjct: 59  ----IRLYGVVLTHPLMMVTE-LAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYL 113

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
              R IH DL   NILL S + VK+ D+
Sbjct: 114 ESKRFIHRDLAARNILLASDDKVKIGDF 141

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 53.5 bits (128), Expect = 2e-08
 Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 18/155 (11%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV------RSINKYREAAMIEIDVLQRLAR 147
           +R+   +G G FG+V  C+D +    +A+K V      +  +K   A   EI +L+ L R
Sbjct: 4   WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-R 62

Query: 148 HDIGGTRCVQ----IRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQL 203
           HD    R VQ    +R+  + +  I + +   G S+ D L+  +Y +   ++ R   RQ+
Sbjct: 63  HD----RIVQYYGCLRDPEEKKLSIFVEYMP-GGSIKDQLK--AYGALTENVTRRYTRQI 115

Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           L+ V+++H   ++H D+K  NIL  SA  VK+ D+
Sbjct: 116 LQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDF 150

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 53.4 bits (128), Expect = 2e-08
 Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 34/164 (20%)

Query: 93  RY-RILSKMGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRL 145
           RY + +  +GEG FG+V + C+D   +   E+VA+K ++     +       EI++L+ L
Sbjct: 4   RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTL 63

Query: 146 ARHDI---------GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLV 196
              +I          G + +Q+           + +  LG SL D+L K+      ++L 
Sbjct: 64  YHENIVKYKGCCSEQGGKGLQL----------IMEYVPLG-SLRDYLPKHK-----LNLA 107

Query: 197 REL--GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           + L   +Q+ E +A++H    IH DL   N+LL +   VK+ D+
Sbjct: 108 QLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDF 151

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 53.5 bits (128), Expect = 2e-08
 Identities = 43/149 (28%), Positives = 76/149 (51%), Gaps = 15/149 (10%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR----LARHDIGG 152
           L ++G+G+FG+V +  DN  +++VAIKI+       E A  EI+ +Q+    L++ D   
Sbjct: 9   LERIGKGSFGEVFKGIDNRTQQVVAIKIID-----LEEAEDEIEDIQQEITVLSQCD--S 61

Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               +    +     + I+ E L G S  D LR   +  F I     + +++L+ + ++H
Sbjct: 62  PYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQI---ATMLKEILKGLDYLH 118

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKV 240
             + IH D+K  N+LL     VK+ D+ V
Sbjct: 119 SEKKIHRDIKAANVLLSEQGDVKLADFGV 147

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 52.5 bits (126), Expect = 6e-08
 Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 16/162 (9%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLAR 147
           +L  RY  L  +G G+ G V    D++  + VA+K IV +  +  + A+ EI +++RL  
Sbjct: 2   DLGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDH 61

Query: 148 HDI---------GGTRCVQ-IRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVR 197
            +I          G+   + + +  +  + + IV E +   L + L +        +  R
Sbjct: 62  DNIVKVYEVLGPSGSDLTEDVGSLTELNS-VYIVQEYMETDLANVLEQGP---LSEEHAR 117

Query: 198 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV-KVPDY 238
               QLL  + ++H   ++H DLKP N+ + + + V K+ D+
Sbjct: 118 LFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDF 159

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 52.0 bits (124), Expect = 6e-08
 Identities = 37/152 (24%), Positives = 78/152 (51%), Gaps = 3/152 (1%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH-DIGG 152
           + ++  +G GT+GQV +    +  +L AIK++       E    EI++L++ + H +I  
Sbjct: 8   FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 67

Query: 153 TRCVQIR-NWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                I+ N     + + +V E  G  S+ D ++     +   + +  + R++L  ++ +
Sbjct: 68  YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 127

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           H+ ++IH D+K +N+LL     VK+ D+ V +
Sbjct: 128 HQHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 159

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 52.5 bits (126), Expect = 6e-08
 Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 11/144 (7%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAA--MIEIDVLQRLARHDIGGTRC 155
           +G+G+FG+V+        +  A+K++  ++I K +E    M E +VL +  +H       
Sbjct: 3   IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPF----L 58

Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           V +   F   + +  V + + G  L+  L++   RSFP    R    ++  ++ ++H L 
Sbjct: 59  VGLHYSFQTADKLYFVLDYVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSLN 116

Query: 215 LIHTDLKPENILLVSAEYVKVPDY 238
           +I+ DLKPENILL S  +V + D+
Sbjct: 117 IIYRDLKPENILLDSQGHVVLTDF 140

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 51.9 bits (125), Expect = 7e-08
 Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 7/145 (4%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++  K+G G FG+V     N   + VA+K ++      EA + E  ++++L RHD    +
Sbjct: 9   KLERKLGAGQFGEVWMGTWNGTTK-VAVKTLKPGTMSPEAFLQEAQIMKKL-RHD----K 62

Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+         I IV E +   SL DFL+    +   +  + ++  Q+ E +A++   
Sbjct: 63  LVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR 122

Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             IH DL   NIL+      K+ D+
Sbjct: 123 NYIHRDLAARNILVGENLVCKIADF 147

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 51.9 bits (125), Expect = 8e-08
 Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 39/168 (23%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARH 148
            Y IL K+GEGTFG+V +    +   +VA+K +  ++  ++     A+ EI +L++L   
Sbjct: 9   DYEILGKLGEGTFGEVYKARQIKTGRVVALKKI-LMHNEKDGFPITALREIKILKKLKHP 67

Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI---DLVRELG----- 200
           ++     V +         I +  E+  P      R + Y   P    DL   L      
Sbjct: 68  NV-----VPL---------IDMAVER--PDKSKRKRGSVYMVTPYMDHDLSGLLENPSVK 111

Query: 201 ----------RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
                      QLLE + ++HE  ++H D+K  NIL+ +   +K+ D+
Sbjct: 112 LTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADF 159

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 51.5 bits (124), Expect = 8e-08
 Identities = 34/150 (22%), Positives = 66/150 (44%), Gaps = 14/150 (9%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHDIGGTR 154
           L ++G G  G V +       +++A+K +R       ++  + E+D+L +          
Sbjct: 6   LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHK--------CN 57

Query: 155 C---VQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               V     F     I I  E +     D + K      P  ++ ++   +L+ + ++H
Sbjct: 58  SPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLH 117

Query: 212 E-LRLIHTDLKPENILLVSAEYVKVPDYKV 240
           E  ++IH D+KP NIL+ S   +K+ D+ V
Sbjct: 118 EKHKIIHRDVKPSNILVNSRGQIKLCDFGV 147

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 52.1 bits (125), Expect = 8e-08
 Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 12/144 (8%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRC 155
           +G G+FG+V         E  AIK ++       K  +    E  +L  L+   I     
Sbjct: 26  LGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFI----- 80

Query: 156 VQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           V +   F   N +  + E  +G  L+  LRK     FP D+ +    +L+ +  ++H   
Sbjct: 81  VNMMCSFQDENRVYFLLEFVVGGELFTHLRKAG--RFPNDVAKFYHAELVLAFEYLHSKD 138

Query: 215 LIHTDLKPENILLVSAEYVKVPDY 238
           +I+ DLKPEN+LL +  +VKV D+
Sbjct: 139 IIYRDLKPENLLLDNKGHVKVTDF 162

Length = 329

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 51.6 bits (123), Expect = 9e-08
 Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 16/148 (10%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVR------SINKYREAAMIEIDVLQRLARHDIGGT 153
           +G+G FG+V  C+D +    +A K V+        +K   A   EI +L+ L +H+    
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL-QHE---- 64

Query: 154 RCVQIRNWF-DYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           R VQ      D       +F +  P  S+ D L+  +Y +    + R+  RQ+LE ++++
Sbjct: 65  RIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLK--AYGALTESVTRKYTRQILEGMSYL 122

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H   ++H D+K  NIL  SA  VK+ D+
Sbjct: 123 HSNMIVHRDIKGANILRDSAGNVKLGDF 150

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 51.5 bits (123), Expect = 1e-07
 Identities = 37/147 (25%), Positives = 74/147 (50%), Gaps = 5/147 (3%)

Query: 94  YRILSKMGEGTFGQVV-ECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           +  +  +G G+FG+V+   + NE    VAIK        ++  +  +   +++  + I  
Sbjct: 32  FNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNY-INH 90

Query: 153 TRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             CV +   F   +++ +V E  +G   + FLR+N  + FP D+      Q++    ++ 
Sbjct: 91  PFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQ 148

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L +++ DLKPEN+LL    ++K+ D+
Sbjct: 149 SLNIVYRDLKPENLLLDKDGFIKMTDF 175

Length = 340

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 51.2 bits (122), Expect = 1e-07
 Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 17/150 (11%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLARHDIG--- 151
           L ++G+G+FG+V +  DN  KE+VAIKI+       E   I  EI VL +     I    
Sbjct: 9   LERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYY 68

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           G+     + W        I+ E L G S  D L+        I  +    R++L+ + ++
Sbjct: 69  GSYLKGTKLW--------IIMEYLGGGSALDLLKPGPLEETYIATIL---REILKGLDYL 117

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           H  R IH D+K  N+LL     VK+ D+ V
Sbjct: 118 HSERKIHRDIKAANVLLSEQGDVKLADFGV 147

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 51.0 bits (123), Expect = 1e-07
 Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 32/160 (20%)

Query: 99  KMGEGTFGQVVECF---DNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHD---- 149
           K+GEG FG+V +      + K   VA+K ++     + R+  + E  V+++L  H     
Sbjct: 2   KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKL-GHPNVVR 60

Query: 150 -IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
            +G   C +          + +V E  + G  L D+LRK+    FP      L  + L S
Sbjct: 61  LLGV--CTE-------EEPLYLVLEYMEGG-DLLDYLRKSR-PVFPSPEKSTLSLKDLLS 109

Query: 207 VA--------FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            A        ++   + +H DL   N L+     VK+ D+
Sbjct: 110 FAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDF 149

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 51.2 bits (122), Expect = 1e-07
 Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 12/149 (8%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA----MIEIDVLQRLARHD 149
           Y  L K+GEGT+  V +      + LVA+K +R   ++ E A    + E+ +L+ L   +
Sbjct: 7   YVKLDKLGEGTYATVFKGRSKLTENLVALKEIRL--EHEEGAPCTAIREVSLLKNLKHAN 64

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           I     V + +       + +VFE L   L  +L  N      +  V+    QLL  +++
Sbjct: 65  I-----VTLHDIIHTERCLTLVFEYLDSDLKQYL-DNCGNLMSMHNVKIFMFQLLRGLSY 118

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDY 238
            H+ +++H DLKP+N+L+     +K+ D+
Sbjct: 119 CHKRKILHRDLKPQNLLINEKGELKLADF 147

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 51.0 bits (122), Expect = 2e-07
 Identities = 58/236 (24%), Positives = 95/236 (40%), Gaps = 48/236 (20%)

Query: 13  NMDKRPRKRPRLTWDVP---PPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTG 69
               RPR+RP LT  +P   P L  P  LP             P  + SS    +     
Sbjct: 19  TTKSRPRRRPDLTLPLPQRDPSLAVPLPLP-------------PPSSSSSSSSSSSASGS 65

Query: 70  SPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RS 127
           +P                 +L+   R+ +++G G  G V +        L A+K++    
Sbjct: 66  APSAAK-------------SLSELERV-NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH 111

Query: 128 INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNS 187
            +  R     EI++L R   H       V+  + FD+   I ++ E        F+   S
Sbjct: 112 EDTVRRQICREIEIL-RDVNH----PNVVKCHDMFDHNGEIQVLLE--------FMDGGS 158

Query: 188 YRSFPIDLVREL---GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
                I   + L    RQ+L  +A++H   ++H D+KP N+L+ SA+ VK+ D+ V
Sbjct: 159 LEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGV 214

Length = 353

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 40/160 (25%)

Query: 93  RYRILSKMGEGTFGQVVECF--DNEKKELVAIKIVRSINK---------YREAAMI-EID 140
           +Y I   +G GT+G+V +    + +  +  AIK  +   +          RE A++ E+ 
Sbjct: 1   KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELK 60

Query: 141 -----VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFL------RKNSYR 189
                 L  +        + V +   FDY  H             D        R+    
Sbjct: 61  HENVVSLVEVFLEH--ADKSVYLL--FDYAEH-------------DLWQIIKFHRQAKRV 103

Query: 190 SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS 229
           S P  +V+ L  Q+L  V ++H   ++H DLKP NIL++ 
Sbjct: 104 SIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMG 143

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 50.5 bits (121), Expect = 2e-07
 Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 12/152 (7%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLARHDIG 151
           Y+ L  +G G +G V          +VA+KI+       + + I  E+ +L +L +    
Sbjct: 3   YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPP 62

Query: 152 GTRCVQIRNWFDYRN--HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                  + +  Y     + I+ E   G S+   ++        I ++    R++L ++ 
Sbjct: 63  NI----TKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYISVII---REVLVALK 115

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           ++H++ +IH D+K  NIL+ +   VK+ D+ V
Sbjct: 116 YIHKVGVIHRDIKAANILVTNTGNVKLCDFGV 147

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 49.9 bits (119), Expect = 3e-07
 Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 9/139 (6%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHD 149
           +Y  +  +G G FG V  C     ++LV IK +   +     R AA  E  VL+ L+  +
Sbjct: 1   KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPN 60

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I     ++    F     + IV E   G +L ++++K        D +     Q+L ++ 
Sbjct: 61  I-----IEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALH 115

Query: 209 FMHELRLIHTDLKPENILL 227
            +H   ++H DLK +NILL
Sbjct: 116 HVHTKLILHRDLKTQNILL 134

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 50.0 bits (120), Expect = 4e-07
 Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 12/151 (7%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAA-MIEIDVLQRLARH 148
            + ++  +G G FG+V    D +  ++ A+K++R    I + + A    E D+L      
Sbjct: 2   DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSP 61

Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
            I     V++   F    H+ +V E + G  L + L +     FP +  R    +L+ ++
Sbjct: 62  WI-----VKLYYSFQDEEHLYLVMEYMPGGDLMNLLIR--KDVFPEETARFYIAELVLAL 114

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
             +H+L  IH D+KP+NIL+ +  ++K+ D+
Sbjct: 115 DSVHKLGFIHRDIKPDNILIDADGHIKLADF 145

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 49.7 bits (119), Expect = 4e-07
 Identities = 34/154 (22%), Positives = 64/154 (41%), Gaps = 15/154 (9%)

Query: 94  YRILSKMGEGTFGQV--VECFDNEKKELVAIKIVRSINKYR---EAAMIEIDVLQRLARH 148
           Y ++  +G G    V    C  N   E VAIK +  + K +   +    E+  + +    
Sbjct: 3   YELIEVIGVGATAVVYAAICLPN--NEKVAIKRI-DLEKCQTSVDELRKEVQAMSQCNHP 59

Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLR-KNSYRSFPIDLVRELGRQLLES 206
           ++           F   + + +V   L G SL D ++           ++  + +++L+ 
Sbjct: 60  NVVKYYTS-----FVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKG 114

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           + ++H    IH D+K  NILL     VK+ D+ V
Sbjct: 115 LEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGV 148

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 49.6 bits (118), Expect = 4e-07
 Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 18/148 (12%)

Query: 99  KMGEGTFGQVVECFDNEKK--ELVAIKIVRSINK---YREAAMIEIDVLQRLARHDIGGT 153
           ++G G FG V +     KK  + VA+KI+++ N     ++  + E +V+Q+L    I   
Sbjct: 2   ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYI--V 59

Query: 154 RCVQI---RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           R + I    +W      + +   +LGP L  FL+KN  +      + EL  Q+   + ++
Sbjct: 60  RMIGICEAESWM-----LVMELAELGP-LNKFLQKN--KHVTEKNITELVHQVSMGMKYL 111

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
            E   +H DL   N+LLV+  Y K+ D+
Sbjct: 112 EETNFVHRDLAARNVLLVTQHYAKISDF 139

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 49.2 bits (117), Expect = 6e-07
 Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 12/149 (8%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA----MIEIDVLQRLARHD 149
           Y  L K+GEGT+  V +        LVA+K +R   ++ E A    + E+ +L+ L   +
Sbjct: 8   YIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRL--EHEEGAPCTAIREVSLLKDLKHAN 65

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           I     V + +       + +VFE L   L  +L  +   S  +  V+    QLL  + +
Sbjct: 66  I-----VTLHDIIHTEKSLTLVFEYLDKDLKQYL-DDCGNSINMHNVKLFLFQLLRGLNY 119

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDY 238
            H  +++H DLKP+N+L+     +K+ D+
Sbjct: 120 CHRRKVLHRDLKPQNLLINERGELKLADF 148

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 48.8 bits (116), Expect = 7e-07
 Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 8/141 (5%)

Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G FG V   +  EK++ VAIK +R      E  + E  V+ +L+       + VQ+
Sbjct: 11  EIGSGQFGLVWLGYWLEKRK-VAIKTIREGAMSEEDFIEEAQVMMKLSH-----PKLVQL 64

Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
                 R+ IC+VFE +    L D+LR      F  + +  +   + E +A++    +IH
Sbjct: 65  YGVCTERSPICLVFEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSNVIH 123

Query: 218 TDLKPENILLVSAEYVKVPDY 238
            DL   N L+   + VKV D+
Sbjct: 124 RDLAARNCLVGENQVVKVSDF 144

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 48.9 bits (116), Expect = 7e-07
 Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 19/151 (12%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR----LARHDIGG 152
           L K+G+G+FG+V +  DN  +++VAIKI+       E A  EI+ +Q+    L++ D   
Sbjct: 9   LEKIGKGSFGEVFKGIDNRTQKVVAIKIID-----LEEAEDEIEDIQQEITVLSQCD--S 61

Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID--LVRELGRQLLESVAF 209
               +    +     + I+ E L G S  D L        P+D   +  + R++L+ + +
Sbjct: 62  PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLDY 116

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           +H  + IH D+K  N+LL     VK+ D+ V
Sbjct: 117 LHSEKKIHRDIKAANVLLSEHGEVKLADFGV 147

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 48.6 bits (116), Expect = 9e-07
 Identities = 32/150 (21%), Positives = 69/150 (46%), Gaps = 12/150 (8%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKI--VRSINKYREAAMI--EIDVLQRLARHD 149
              +  +G GTFG+V    D   +   A+K+  +  + + ++   +  E  VL+ ++   
Sbjct: 3   LERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPF 62

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I            D +  + ++ E + G  L+ +LR  +   F          +++ ++ 
Sbjct: 63  IIRLFW----TEHD-QRFLYMLMEYVPGGELFSYLR--NSGRFSNSTGLFYASEIVCALE 115

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++H   +++ DLKPENILL    ++K+ D+
Sbjct: 116 YLHSKEIVYRDLKPENILLDKEGHIKLTDF 145

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 48.5 bits (115), Expect = 1e-06
 Identities = 35/143 (24%), Positives = 72/143 (50%), Gaps = 10/143 (6%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +G+GTFG+V+   +    +  A+KI++    I K   A  +    + +  RH        
Sbjct: 3   LGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPF----LT 58

Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
            ++  F  ++ +C V E + G  L+  L +   R F  D  R  G +++ ++ ++H  ++
Sbjct: 59  SLKYSFQTKDRLCFVMEYVNGGELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSGKI 116

Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           ++ DLK EN++L    ++K+ D+
Sbjct: 117 VYRDLKLENLMLDKDGHIKITDF 139

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 48.0 bits (114), Expect = 1e-06
 Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 10/148 (6%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE---AAMIEIDVLQRLARHDI 150
           Y  L K+GEG++  V +       +LVA+K++ S+         A+ E  +L+ L   +I
Sbjct: 7   YLNLEKLGEGSYATVYKGISRINGQLVALKVI-SMKTEEGVPFTAIREASLLKGLKHANI 65

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V + +    +  +  VFE +   L  ++ ++     P + VR    QLL  +A++
Sbjct: 66  -----VLLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYN-VRLFMFQLLRGLAYI 119

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H   ++H DLKP+N+L+     +K+ D+
Sbjct: 120 HGQHILHRDLKPQNLLISYLGELKLADF 147

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 47.9 bits (114), Expect = 1e-06
 Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 8/145 (5%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +++ K+G G FG+V   + N   + VAIK ++  +   EA + E +++++L +H     R
Sbjct: 9   KLVKKLGAGQFGEVWMGYYNGHTK-VAIKSLKQGSMSPEAFLAEANLMKQL-QHP----R 62

Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V++      +  I I+ E +   SL DFL+        I+ + ++  Q+ E +AF+   
Sbjct: 63  LVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK 121

Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             IH DL+  NIL+      K+ D+
Sbjct: 122 NYIHRDLRAANILVSETLCCKIADF 146

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 48.1 bits (114), Expect = 1e-06
 Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 8/145 (5%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +++ K+G G FG+V     N   + VA+K ++      E+ + E  ++++L RHD    +
Sbjct: 9   QLIKKLGNGQFGEVWMGTWNGNTK-VAVKTLKPGTMSPESFLEEAQIMKKL-RHD----K 62

Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+         I IV E +   SL DFL+    R+  +  + ++  Q+   +A++  +
Sbjct: 63  LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM 121

Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             IH DL+  NIL+      K+ D+
Sbjct: 122 NYIHRDLRSANILVGDGLVCKIADF 146

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 47.7 bits (113), Expect = 2e-06
 Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 16/153 (10%)

Query: 94  YRILSKMGEGTFGQVVEC---FDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHD 149
           ++I  K+G G F +V       D +   L  ++I   ++ K R+  + EID+L++L   +
Sbjct: 4   FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPN 63

Query: 150 IGGTRCVQIRNWFDYRNHICIVFE-----KLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
           +     ++  + F   N + IV E      L   +  F  K   R  P   V +   QL 
Sbjct: 64  V-----IKYLDSFIEDNELNIVLELADAGDLSQMIKYF--KKQKRLIPERTVWKYFVQLC 116

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            +V  MH  R++H D+KP N+ + +   VK+ D
Sbjct: 117 SAVEHMHSRRVMHRDIKPANVFITATGVVKLGD 149

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 6/152 (3%)

Query: 90  LTPRYRILSKMGEGTFGQVVECFDNEKKELVAI-KIVRSINKYREA--AMIEIDVLQRLA 146
           +  RY+ +  +G G +G V    D    + VAI KI  + +    A   + E+ +L+   
Sbjct: 3   VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFK 62

Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
             +I   R +      D++  + +V + +   L+  +  +  +    + +R    QLL  
Sbjct: 63  HDNIIAIRDILRPPGADFK-DVYVVMDLMESDLHHIIHSD--QPLTEEHIRYFLYQLLRG 119

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           + ++H   +IH DLKP N+L+     +++ D+
Sbjct: 120 LKYIHSANVIHRDLKPSNLLVNEDCELRIGDF 151

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 47.3 bits (112), Expect = 2e-06
 Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 10/150 (6%)

Query: 93  RYRILSKMGEGTFGQ---VVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD 149
           +Y +L  +GEG+FG+   V     ++K  +  I++ +S +   E +  E  +L ++   +
Sbjct: 1   QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAV-EDSRKEAVLLAKMKHPN 59

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I     V  +  F+   H+ IV E   G  L   ++    + FP D + +   Q+   V 
Sbjct: 60  I-----VAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQ 114

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            +HE R++H D+K +NI L     VK+ D+
Sbjct: 115 HIHEKRVLHRDIKSKNIFLTQNGKVKLGDF 144

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 47.0 bits (111), Expect = 3e-06
 Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 10/146 (6%)

Query: 95  RILSKMGEGTFGQV-VECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           R+  K+G+G FG+V +  ++   K  VAIK ++      EA + E  ++++L RHD    
Sbjct: 9   RLDVKLGQGCFGEVWMGTWNGTTK--VAIKTLKPGTMMPEAFLQEAQIMKKL-RHD---- 61

Query: 154 RCVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
           + V +         I IV E +G  SL DFL++   +   +  + ++  Q+ + +A++  
Sbjct: 62  KLVPLYAVVS-EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER 120

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDY 238
           +  IH DL+  NIL+      K+ D+
Sbjct: 121 MNYIHRDLRAANILVGDNLVCKIADF 146

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 47.3 bits (112), Expect = 3e-06
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 12/149 (8%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA----MIEIDVLQRLARHD 149
           Y  L K+GEGT+  V +      + LVA+K +R   ++ E A    + E+ +L+ L   +
Sbjct: 8   YIKLEKLGEGTYATVFKGRSKLTENLVALKEIRL--EHEEGAPCTAIREVSLLKDLKHAN 65

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           I     V + +       + +VFE L   L  ++  +      +  V+    Q+L  +A+
Sbjct: 66  I-----VTLHDIVHTDKSLTLVFEYLDKDLKQYM-DDCGNIMSMHNVKIFLYQILRGLAY 119

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDY 238
            H  +++H DLKP+N+L+     +K+ D+
Sbjct: 120 CHRRKVLHRDLKPQNLLINERGELKLADF 148

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 47.0 bits (112), Expect = 3e-06
 Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 44/160 (27%)

Query: 100 MGEGTFGQVVECFDNEK--KEL-VAIKIVR--SINKYREAAMIEIDVLQRLARHDIGGTR 154
           +G G FG VV+     K  KE+ VA+K ++   I   ++  + E  V+ +L         
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQL--------- 53

Query: 155 CVQIRNWFDYRNHICIV----------------FEKLGPSLYDFLRKNSYRSFPIDLVRE 198
                      +H CIV                   LGP L  +L+K   R  P+  ++E
Sbjct: 54  -----------DHPCIVRLIGVCKGEPLMLVMELAPLGP-LLKYLKKR--REIPVSDLKE 99

Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           L  Q+   +A++     +H DL   N+LLV+    K+ D+
Sbjct: 100 LAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDF 139

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 46.7 bits (111), Expect = 4e-06
 Identities = 42/151 (27%), Positives = 77/151 (50%), Gaps = 12/151 (7%)

Query: 95  RILSKMGEGTFGQVVEC-FD---NEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           + + ++G+G FG V  C +D   +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 7   KFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDN 66

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           I   + V    +   R ++ +V E L P  SL D+L+K+  R     L+     Q+ + +
Sbjct: 67  IVKYKGV---CYSAGRRNLRLVMEYL-PYGSLRDYLQKHRERLDHRKLL-LYASQICKGM 121

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            ++   R +H DL   NIL+ S   VK+ D+
Sbjct: 122 EYLGSKRYVHRDLATRNILVESENRVKIGDF 152

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 46.9 bits (111), Expect = 4e-06
 Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 12/144 (8%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMI-EIDVLQRLARHDIGGTRC 155
           +G+GTFG+V+   +       A+KI+R    I K   A  + E  VLQ   RH       
Sbjct: 3   LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA-- 59

Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
             ++  F   + +C V E   G  L+  L +   R F  +  R  G +++ ++ ++H   
Sbjct: 60  --LKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRD 115

Query: 215 LIHTDLKPENILLVSAEYVKVPDY 238
           +++ D+K EN++L    ++K+ D+
Sbjct: 116 VVYRDIKLENLMLDKDGHIKITDF 139

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 46.6 bits (111), Expect = 5e-06
 Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 14/151 (9%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKI-----VRSINKYREAAMIEIDVLQRLARH 148
           ++IL+++G+G +GQV      +  E+VA+K      +  +N+ R   + E D+L    + 
Sbjct: 3   FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHV-LTERDILTT-TKS 60

Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           +      V++   F    ++ +  E + G      L  N+      D  R    ++ E+V
Sbjct: 61  EW----LVKLLYAFQDDEYLYLAMEYVPGGDFRTLL--NNLGVLSEDHARFYMAEMFEAV 114

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
             +HEL  IH DLKPEN L+ ++ ++K+ D+
Sbjct: 115 DALHELGYIHRDLKPENFLIDASGHIKLTDF 145

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 46.3 bits (110), Expect = 5e-06
 Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 14/153 (9%)

Query: 92  PR--YRILSKMGEGTFGQVVE-CFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLAR 147
           PR  + +  K+G G FG+V E  + N  +  VAIKI++S +  ++     E+  L+RL R
Sbjct: 4   PREEFTLERKLGSGYFGEVWEGLWKNRVR--VAIKILKSDDLLKQQDFQKEVQALKRL-R 60

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           H       + +         + I+ E +   SL  FLR    +  P+  + ++  Q+ E 
Sbjct: 61  HK----HLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEG 116

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYV-KVPDY 238
           +A++ E   IH DL   NI LV  + V KV D+
Sbjct: 117 MAYLEEQNSIHRDLAARNI-LVGEDLVCKVADF 148

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 46.1 bits (109), Expect = 6e-06
 Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 22/150 (14%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVR-------SINKYREAAMIEIDVLQRLARHDIG- 151
           +G+G +G V  C    + +L+A+K V        +  K  E    E+D+L+ L   +I  
Sbjct: 8   LGKGAYGTVY-CGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQ 66

Query: 152 --GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
             GT C+         N I I  E + G S+   L  N +   P  +  +  +Q+L+ VA
Sbjct: 67  YLGT-CLD-------DNTISIFMEFVPGGSISSIL--NRFGPLPEPVFCKYTKQILDGVA 116

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++H   ++H D+K  N++L+    +K+ D+
Sbjct: 117 YLHNNCVVHRDIKGNNVMLMPNGIIKLIDF 146

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 45.9 bits (109), Expect = 7e-06
 Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 18/154 (11%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA-RHDIGGTRC 155
           LS++GEG  G V +C       + A+K + +         ++  +L+ L           
Sbjct: 6   LSRLGEGAGGSVTKCRLKNTGMIFALKTITT----DPNPDLQKQILRELEINKSCKSPYI 61

Query: 156 VQIRNWF--DYRNHICIVFEKLG----PSLYDFLRKNSYRSFPIDLVRELGR---QLLES 206
           V+    F  +  + I I  E        S+Y  ++K   R       + LG+    +L+ 
Sbjct: 62  VKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGE----KVLGKIAESVLKG 117

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           ++++H  ++IH D+KP NILL     VK+ D+ V
Sbjct: 118 LSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGV 151

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 46.0 bits (109), Expect = 7e-06
 Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 18/154 (11%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV-----RSINKYREAAMIEIDVLQRLAR 147
            +  L ++G G+FG V    D    E+VAIK +     +S  K+++  + E+  LQ+L R
Sbjct: 16  LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDI-IKEVRFLQQL-R 73

Query: 148 HDIGGTRCVQIRNWFDYRNHIC-IVFEKLGPSLYDFL--RKNSYRSFPIDLVRELGRQLL 204
           H       ++ +  +  R H   +V E    S  D L   K   +   I  +       L
Sbjct: 74  H----PNTIEYKGCY-LREHTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICH---GAL 125

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           + +A++H    IH D+K  NILL     VK+ D+
Sbjct: 126 QGLAYLHSHERIHRDIKAGNILLTEPGTVKLADF 159

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 46.0 bits (109), Expect = 7e-06
 Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 9/143 (6%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           +G+GT+G V    D   +  +AIK I    ++Y +    EI +   L   +I     VQ 
Sbjct: 16  LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNI-----VQY 70

Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLR-KNSYRSFPIDLVRELGRQLLESVAFMHELRLI 216
                      I  E++ G SL   LR K          +    +Q+LE + ++H+ +++
Sbjct: 71  LGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIV 130

Query: 217 HTDLKPENILLVS-AEYVKVPDY 238
           H D+K +N+L+ + +  VK+ D+
Sbjct: 131 HRDIKGDNVLVNTYSGVVKISDF 153

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 46.2 bits (109), Expect = 7e-06
 Identities = 38/144 (26%), Positives = 74/144 (51%), Gaps = 11/144 (7%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS---IN-KYREAAMIEIDVLQRLARHDIGGTRC 155
           +G+G+FG+V+        +  A+K+++    +N K ++  M E +VL +  +H       
Sbjct: 3   IGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPF----L 58

Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           V +   F     +  V + + G  L+  L++   RSFP    R    ++  ++ ++H + 
Sbjct: 59  VGLHYSFQTTEKLYFVLDFVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSIN 116

Query: 215 LIHTDLKPENILLVSAEYVKVPDY 238
           +++ DLKPENILL S  +V + D+
Sbjct: 117 IVYRDLKPENILLDSQGHVVLTDF 140

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 46.2 bits (109), Expect = 8e-06
 Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 25/146 (17%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ L+ +G G +G V   +D   ++ VA+K        ++ +   YRE     + +L+ 
Sbjct: 16  RYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRE-----LRLLKH 70

Query: 145 LARHDIGG-----TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
           +   ++ G     T    I N+    N + +V   +G  L + ++    +    + V+ L
Sbjct: 71  MKHENVIGLLDVFTPATSIENF----NEVYLVTNLMGADLNNIVK---CQKLSDEHVQFL 123

Query: 200 GRQLLESVAFMHELRLIHTDLKPENI 225
             QLL  + ++H   +IH DLKP N+
Sbjct: 124 IYQLLRGLKYIHSAGIIHRDLKPSNV 149

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 45.5 bits (108), Expect = 1e-05
 Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 9/146 (6%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++L K+G G FG+V E   N     VA+K ++      +  + E  ++++L RH     +
Sbjct: 9   QLLRKLGAGQFGEVWEGLWNNTTP-VAVKTLKPGTMDPKDFLAEAQIMKKL-RH----PK 62

Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +Q+         I IV E  K G SL ++L+  + R+  +  + ++  Q+   +A++  
Sbjct: 63  LIQLYAVCTLEEPIYIVTELMKYG-SLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEA 121

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDY 238
              IH DL   N+L+      KV D+
Sbjct: 122 QNYIHRDLAARNVLVGENNICKVADF 147

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 45.4 bits (107), Expect = 1e-05
 Identities = 35/145 (24%), Positives = 72/145 (49%), Gaps = 7/145 (4%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +++ K+G G FG+V   + N   + VA+K ++      +A + E ++++ L +HD    +
Sbjct: 9   KLVKKLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAFLEEANLMKTL-QHD----K 62

Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V++         I I+ E +   SL DFL+ +      +  + +   Q+ E +A++   
Sbjct: 63  LVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 122

Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             IH DL+  N+L+  +   K+ D+
Sbjct: 123 NYIHRDLRAANVLVSESLMCKIADF 147

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 40/159 (25%), Positives = 61/159 (38%), Gaps = 51/159 (32%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +GQV   FD +    VAIK         + +   YRE          R
Sbjct: 16  RYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYREL---------R 66

Query: 145 LARHDIGGTRCVQIRNWFDYRNHIC------------------IVFEKLGPSLYDFLRKN 186
           L +H              D+ N I                   +V   +G  L + ++  
Sbjct: 67  LLKH-------------MDHENVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKC- 112

Query: 187 SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENI 225
             +    D ++ L  Q+L  + ++H   +IH DLKP NI
Sbjct: 113 --QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNI 149

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 25/99 (25%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 162 FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK 221
           F+ + H+C+V E +       L KN   + P+D+ R    + + ++ ++H   ++H DLK
Sbjct: 70  FETKRHLCMVMEYVEGGDCATLLKN-IGALPVDMARMYFAETVLALEYLHNYGIVHRDLK 128

Query: 222 PENILLVSAEYVKVPDYKVPSPRHAFSFQTFLSMASRVY 260
           P+N+L+ S  ++K+ D+         S    +S+ + +Y
Sbjct: 129 PDNLLITSMGHIKLTDF-------GLSKIGLMSLTTNLY 160

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 45.0 bits (106), Expect = 1e-05
 Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 22/185 (11%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           + I+  +G+GT+G+V +  + +     A+KI+  I+   E    E ++L+ L+ H     
Sbjct: 20  WEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDH----P 75

Query: 154 RCVQIRNWF---DYRN--HICIVFEKL-GPSLYD----FLRKNSYRSFPIDLVRELGRQL 203
             V+    +   D +N   + +V E   G S+ D    FL++      PI  +  +  + 
Sbjct: 76  NVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPI--IAYILHEA 133

Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP------RHAFSFQTFLSMAS 257
           L  +  +H  + IH D+K  NILL +   VK+ D+ V +       R   S  T   MA 
Sbjct: 134 LMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAP 193

Query: 258 RVYIC 262
            V  C
Sbjct: 194 EVIAC 198

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 45.0 bits (106), Expect = 2e-05
 Identities = 41/141 (29%), Positives = 74/141 (52%), Gaps = 8/141 (5%)

Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           K+G G FG+V     N K   VA+K ++  +   EA + E +V++ L +HD    + V++
Sbjct: 13  KLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHD----KLVKL 66

Query: 159 RNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
            +    +  I I+ E +   SL DFL+ +     P+  + +   Q+ E +AF+ +   IH
Sbjct: 67  -HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIH 125

Query: 218 TDLKPENILLVSAEYVKVPDY 238
            DL+  NIL+ ++   K+ D+
Sbjct: 126 RDLRAANILVSASLVCKIADF 146

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 45.0 bits (106), Expect = 2e-05
 Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 11/144 (7%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAA--MIEIDVLQRLARHDIGGTRC 155
           +G+G+FG+V+           A+K++  ++I K +E    M E +VL +  +H       
Sbjct: 3   IGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPF----L 58

Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           V +   F     +  V + + G  L+  L++   R F     R    ++  ++ ++H L 
Sbjct: 59  VGLHYSFQTAEKLYFVLDYVNGGELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLN 116

Query: 215 LIHTDLKPENILLVSAEYVKVPDY 238
           +I+ DLKPENILL S  +V + D+
Sbjct: 117 IIYRDLKPENILLDSQGHVVLTDF 140

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 44.6 bits (105), Expect = 2e-05
 Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 12/151 (7%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHD 149
           +RI  K+G G F +V           VA+K V+  +    K R   + EID+L++L   +
Sbjct: 4   FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 63

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLR--KNSYRSFPIDLVRELGRQLLES 206
           +     ++    F   N + IV E      L   ++  K   R  P   V +   QL  +
Sbjct: 64  V-----IKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSA 118

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           +  MH  R++H D+KP N+ + +   VK+ D
Sbjct: 119 LEHMHSRRVMHRDIKPANVFITATGVVKLGD 149

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 45.0 bits (107), Expect = 2e-05
 Identities = 32/141 (22%), Positives = 67/141 (47%), Gaps = 12/141 (8%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSI---NKYREAAMIEIDVLQRLAR 147
            ++ +  +G+G  G+V         +L A+K++  + +   NK +     E ++L  L  
Sbjct: 2   HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVL-TEQEILATL-D 59

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           H         +   F    ++C+V +   G  L+  L++   +    ++ R    ++L +
Sbjct: 60  HPF----LPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLA 115

Query: 207 VAFMHELRLIHTDLKPENILL 227
           + ++H L +++ DLKPENILL
Sbjct: 116 LEYLHLLGIVYRDLKPENILL 136

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 18/151 (11%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
            L ++G GT GQV +    +   ++A+K + R+ NK  E   I +D+   L  HD     
Sbjct: 19  NLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKE-ENKRILMDLDVVLKSHD----- 72

Query: 155 C---VQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
           C   V+   +F   + + I  E +   L D L K      P D+   LG+  +  V  +H
Sbjct: 73  CPYIVKCYGYFITDSDVFICMELMSTCL-DKLLKRIQGPIPEDI---LGKMTVAIVKALH 128

Query: 212 ELR----LIHTDLKPENILLVSAEYVKVPDY 238
            L+    +IH D+KP NILL ++  VK+ D+
Sbjct: 129 YLKEKHGVIHRDVKPSNILLDASGNVKLCDF 159

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 45.0 bits (106), Expect = 2e-05
 Identities = 37/144 (25%), Positives = 72/144 (50%), Gaps = 18/144 (12%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR------ 147
           Y++ + +G G+FG V E    +  E VAIK V    +Y+     E+ +++ L        
Sbjct: 68  YKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNR---ELLIMKNLNHINIIFL 124

Query: 148 HDIGGTRCVQI--RNWFDYRNHICIVFEKLGPSLYDFLRKNSY--RSFPIDLVRELGRQL 203
            D   T C +   +N F     + +V E +  +++ +++  +    + P+ LV+    QL
Sbjct: 125 KDYYYTECFKKNEKNIF-----LNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQL 179

Query: 204 LESVAFMHELRLIHTDLKPENILL 227
             ++A++H   + H DLKP+N+L+
Sbjct: 180 CRALAYIHSKFICHRDLKPQNLLI 203

Length = 440

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 44.5 bits (105), Expect = 2e-05
 Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 22/150 (14%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-------EAAMIEIDVLQRLARHDIGG 152
           +G+G FG+V  C      +L A K    +NK R       E AM+E  +L ++    I  
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACK---KLNKKRLKKRKGYEGAMVEKRILAKVHSRFI-- 55

Query: 153 TRCVQIRNWFDYRNHICIVFE-----KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
              V +   F  +  +C+V        L   +Y+   +N    FP         Q++  +
Sbjct: 56  ---VSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENP--GFPEPRACFYTAQIISGL 110

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPD 237
             +H+ R+I+ DLKPEN+LL +   V++ D
Sbjct: 111 EHLHQRRIIYRDLKPENVLLDNDGNVRISD 140

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 44.5 bits (105), Expect = 3e-05
 Identities = 36/149 (24%), Positives = 74/149 (49%), Gaps = 9/149 (6%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +G+GTFGQV +    + + + A+K++  + I   +E A    E ++L R    +      
Sbjct: 1   IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDE--SPFI 58

Query: 156 VQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           V ++  F   + + +V +   G  L+  L+K     F  D  +    +L+ ++  +H+  
Sbjct: 59  VGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEG--RFSEDRAKFYIAELVLALEHLHKYD 116

Query: 215 LIHTDLKPENILLVSAEYVKVPDYKVPSP 243
           +++ DLKPENILL +  ++ + D+ +   
Sbjct: 117 IVYRDLKPENILLDATGHIALCDFGLSKA 145

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 44.2 bits (104), Expect = 3e-05
 Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 32/193 (16%)

Query: 91  TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI 150
           T  + I+  +G+GT+G+V +  + +   L A+KI+  I+   E    E ++LQ L  H  
Sbjct: 21  TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNH-- 78

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL---GRQLLESV 207
                V+    F Y+    +     G  L+  L   +  S   +LV+ L   G++L E++
Sbjct: 79  --PNVVKFYGMF-YKADKLV-----GGQLWLVLELCNGGSV-TELVKGLLICGQRLDEAM 129

Query: 208 ------------AFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP------RHAFSF 249
                         +H  R+IH D+K  NILL +   VK+ D+ V +       R   S 
Sbjct: 130 ISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSV 189

Query: 250 QTFLSMASRVYIC 262
            T   MA  V  C
Sbjct: 190 GTPFWMAPEVIAC 202

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 44.7 bits (105), Expect = 3e-05
 Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 24/158 (15%)

Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAA--MIEIDVL 142
           GE+    Y ++ K+G G FG+V        +E    K +  R + K RE +  +IE++V+
Sbjct: 8   GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVM 66

Query: 143 QRLARHDIGGTRCV-QIRNWFDYRNHICIVFEKLGPSLYDFLR--KNSYRSF-PID--LV 196
           + L   +I   R + +  N  + + +I + F   G    D  R  +  Y+ F  I+   +
Sbjct: 67  RELKHKNI--VRYIDRFLNKANQKLYILMEFCDAG----DLSRNIQKCYKMFGKIEEHAI 120

Query: 197 RELGRQLLESVAFMHEL-------RLIHTDLKPENILL 227
            ++ RQLL ++A+ H L       R++H DLKP+NI L
Sbjct: 121 VDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFL 158

Length = 1021

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 22/154 (14%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA---AMIEIDVLQRLAR--- 147
           Y+ L K+GEG++  V +       +LVA+K +R +     A   A+ E  +L+ L     
Sbjct: 7   YKKLDKLGEGSYATVYKGRSKLTGQLVALKEIR-LEHEEGAPFTAIREASLLKDLKHANI 65

Query: 148 ---HDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
              HDI  T           +  + +VFE L   L  ++         +  VR    QLL
Sbjct: 66  VTLHDIIHT-----------KKTLTLVFEYLDTDLKQYMDDCG-GGLSMHNVRLFLFQLL 113

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
             +A+ H+ R++H DLKP+N+L+     +K+ D+
Sbjct: 114 RGLAYCHQRRVLHRDLKPQNLLISERGELKLADF 147

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 44.3 bits (104), Expect = 3e-05
 Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 19/156 (12%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE  ++      +
Sbjct: 18  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLL------K 71

Query: 145 LARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
             +H+  IG           +  N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 72  HMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 128

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 129 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 164

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 43.9 bits (103), Expect = 3e-05
 Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 13/158 (8%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV----RSINKYREAAMIEIDVLQRLARHDIGG 152
           L ++G G+FG V    D    E+VAIK +    +  N+  +  + E+  LQ+L RH    
Sbjct: 20  LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RH---- 74

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
              +Q R  +   +   +V E    S  D L  +      +++   +    L+ +A++H 
Sbjct: 75  PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-AVTHGALQGLAYLHS 133

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAF 247
             +IH D+K  NILL     VK+ D+    + +P + F
Sbjct: 134 HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF 171

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 43.9 bits (103), Expect = 3e-05
 Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 8/145 (5%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    +
Sbjct: 9   RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 62

Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+         I IV E +   SL DFL+    +   +  + ++  Q+   +A++  +
Sbjct: 63  LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 121

Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             +H DL+  NIL+      KV D+
Sbjct: 122 NYVHRDLRAANILVGENLVCKVADF 146

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 43.9 bits (104), Expect = 4e-05
 Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 13/145 (8%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS--INKYR--EAAMIEIDVLQRLARHDIGGTRC 155
           +G+G+FG+V+        EL A+K+++   I +    E  M E  VL    +H       
Sbjct: 3   LGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPF----L 58

Query: 156 VQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            Q+ + F  ++ +  V E +  G  ++   R      F     R    +++  + F+HE 
Sbjct: 59  TQLHSCFQTKDRLFFVMEYVNGGDLMFHIQR---SGRFDEPRARFYAAEIVLGLQFLHER 115

Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
            +I+ DLK +N+LL S  ++K+ D+
Sbjct: 116 GIIYRDLKLDNVLLDSEGHIKIADF 140

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 43.6 bits (103), Expect = 4e-05
 Identities = 33/149 (22%), Positives = 70/149 (46%), Gaps = 9/149 (6%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHDIGG 152
             +S +G G  G V +        ++A K+V   + +  R+  + E+ ++     H+   
Sbjct: 8   ETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIM-----HECRS 62

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH- 211
              V     F   N+IC+  E +     D + K      P++++ ++   ++E + +++ 
Sbjct: 63  PYIVSFYGAFLNENNICMCMEFMDCGSLDRIYK-KGGPIPVEILGKIAVAVVEGLTYLYN 121

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKV 240
             R++H D+KP NIL+ S   +K+ D+ V
Sbjct: 122 VHRIMHRDIKPSNILVNSRGQIKLCDFGV 150

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 43.6 bits (103), Expect = 4e-05
 Identities = 35/146 (23%), Positives = 68/146 (46%), Gaps = 16/146 (10%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-------EAAMIEIDVLQRLARHDIGG 152
           +G+G FG+V  C      ++ A K    ++K R       + A+ E  +L++++   I  
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACK---KLDKKRLKKRKGEQMALNEKKILEKVSSRFI-- 55

Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V +   F+ ++ +C+V   + G  L   +       FP         Q++  +  +H
Sbjct: 56  ---VSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLH 112

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPD 237
           + R+++ DLKPEN+LL     V++ D
Sbjct: 113 QRRIVYRDLKPENVLLDDHGNVRISD 138

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 43.8 bits (103), Expect = 4e-05
 Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 9/149 (6%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           + I+  +G G FG+V        + + A+KI   +NK+      E     R  R+ +   
Sbjct: 3   FEIIKVIGRGAFGEVAVVKMKHTERIYAMKI---LNKWEMLKRAETACF-REERNVLVNG 58

Query: 154 RCVQIRNW---FDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
            C  I      F   N++ +V +  +G  L   L K   R  P D+ R    +++ ++  
Sbjct: 59  DCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDR-LPEDMARFYIAEMVLAIHS 117

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +H+L  +H D+KP+N+LL    ++++ D+
Sbjct: 118 IHQLHYVHRDIKPDNVLLDMNGHIRLADF 146

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 43.7 bits (103), Expect = 5e-05
 Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 18/162 (11%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINK--YREAAMIEIDVLQRLARHD 149
           RY  L ++G G +G V    D    E VAIK + R      + + A  E+ +L+ +   +
Sbjct: 16  RYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHEN 75

Query: 150 IGGTRCVQI-----RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
           + G   V         + D        F  + P +   L+K        D V+ L  Q+L
Sbjct: 76  VIGLLDVFTSAVSGDEFQD--------FYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQML 127

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA 246
             + ++H   +IH DLKP N+ +     +K+ D+ +   RHA
Sbjct: 128 CGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGL--ARHA 167

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 43.5 bits (102), Expect = 5e-05
 Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 15/159 (9%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV-----RSINKYREAAMIEIDVLQRLARHDIG 151
           L ++G G+FG V    D    E+VAIK +     +S  K+++  + E+  LQR+   +  
Sbjct: 30  LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDI-IKEVKFLQRIKHPN-- 86

Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               ++ +  +   +   +V E    S  D L  +      +++   +    L+ +A++H
Sbjct: 87  ---SIEYKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-AITHGALQGLAYLH 142

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAF 247
              +IH D+K  NILL     VK+ D+    + SP ++F
Sbjct: 143 SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSF 181

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 43.5 bits (102), Expect = 5e-05
 Identities = 37/144 (25%), Positives = 75/144 (52%), Gaps = 11/144 (7%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAA--MIEIDVLQRLARHDIGGTRC 155
           +G+G+FG+V+      +++  A+K++  ++I K +E    M E +VL +  +H       
Sbjct: 3   IGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPF----L 58

Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           V +   F   + +  V + + G  L+  L++   R F     R    ++  ++ ++H L 
Sbjct: 59  VGLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLN 116

Query: 215 LIHTDLKPENILLVSAEYVKVPDY 238
           +++ DLKPENILL S  ++ + D+
Sbjct: 117 IVYRDLKPENILLDSQGHIVLTDF 140

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 43.2 bits (101), Expect = 6e-05
 Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 10/148 (6%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARHDIG 151
           +Y    K+G+G  G V    D    + VAIK +    + ++  +I EI V++ L   +I 
Sbjct: 20  KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNI- 78

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               V   + F   + + +V E L G SL D + +       I  V    R+ L+++ F+
Sbjct: 79  ----VNFLDSFLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAV---CRECLQALEFL 131

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  ++IH D+K +N+LL     VK+ D+
Sbjct: 132 HANQVIHRDIKSDNVLLGMDGSVKLTDF 159

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 43.1 bits (101), Expect = 8e-05
 Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 27/157 (17%)

Query: 93  RYRILSKMGEGTFGQVVECF------DNEKKELVAI------KIVRSINKY-----REAA 135
            +R++  +  G FG++  C       + E +  V        K  R I K      R A 
Sbjct: 149 HFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAI 208

Query: 136 MIE--IDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNS--YRSF 191
            +E  I  L RL   +I     ++I        +  ++ +K    LY F+   +  ++  
Sbjct: 209 QLENEILALGRLNHENI-----LKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDR 263

Query: 192 P-IDLVRELGRQLLESVAFMHELRLIHTDLKPENILL 227
           P +   R + +QLL +V ++H+ +LIH D+K ENI L
Sbjct: 264 PLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFL 300

Length = 501

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 42.7 bits (101), Expect = 8e-05
 Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 30/158 (18%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA--MIEIDVLQRLARHDIGGTR 154
           L ++G G FG V +        ++A+K +RS    +E    ++++DV+ R        + 
Sbjct: 9   LGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMR-------SSD 61

Query: 155 CVQIRNWFDYRNH-----IC-----IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
           C  I  ++          IC     I  +K    +Y+ L+       P ++   LG+  +
Sbjct: 62  CPYIVKFYGALFREGDCWICMELMDISLDKFYKYVYEVLKSV----IPEEI---LGKIAV 114

Query: 205 ESVAFMH----ELRLIHTDLKPENILLVSAEYVKVPDY 238
            +V  ++    EL++IH D+KP NILL     +K+ D+
Sbjct: 115 ATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDF 152

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 43.0 bits (101), Expect = 9e-05
 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)

Query: 169 CIVFEKLGPSLYDFLRKNSYRSFPIDL--VRELGRQLLESVAFMHELRLIHTDLKPENIL 226
           C+V  K    LY +L     R  P+ L  V  + RQLL ++ ++H   +IH D+K EN+L
Sbjct: 236 CLVLPKYRSDLYTYL---GARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVL 292

Query: 227 LVSAEYVKVPDY 238
           +   E + + D+
Sbjct: 293 VNGPEDICLGDF 304

Length = 461

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 42.6 bits (100), Expect = 9e-05
 Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 14/150 (9%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           +Y    K+G+G  G V    D    + VAIK +    + ++  +I   ++ R  +H    
Sbjct: 20  KYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHP--- 76

Query: 153 TRCVQIRNWFD---YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                I N+ D     + + +V E L G SL D + +       I  V    R+ L+++ 
Sbjct: 77  ----NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALE 129

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           F+H  ++IH D+K +NILL     VK+ D+
Sbjct: 130 FLHSNQVIHRDIKSDNILLGMDGSVKLTDF 159

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 5/141 (3%)

Query: 90  LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREA--AMIEIDVLQRLA 146
           +  +Y  +  +G G +G V    ++E  E VAIK I  + +   +A   + EI +L+ L 
Sbjct: 3   VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLD 62

Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
             ++   + +      +  N + IV+E +   L+  +R +  ++   D  +    QLL  
Sbjct: 63  HENVIAIKDIMPPPHREAFNDVYIVYELMDTDLHQIIRSS--QTLSDDHCQYFLYQLLRG 120

Query: 207 VAFMHELRLIHTDLKPENILL 227
           + ++H   ++H DLKP N+LL
Sbjct: 121 LKYIHSANVLHRDLKPSNLLL 141

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 42.3 bits (99), Expect = 1e-04
 Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 13/145 (8%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHDIGGTRC 155
           +G+GTFG+V+   +       A+KI++   I    E A  + E  VLQ  +RH       
Sbjct: 3   LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPF----L 57

Query: 156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH-EL 213
             ++  F   + +C V E   G  L+  L +   R F  D  R  G +++ ++ ++H E 
Sbjct: 58  TALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEK 115

Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
            +++ DLK EN++L    ++K+ D+
Sbjct: 116 NVVYRDLKLENLMLDKDGHIKITDF 140

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 41.9 bits (98), Expect = 1e-04
 Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 27/160 (16%)

Query: 100 MGEGTFGQVVECF--DNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGTR 154
           +GEG FGQV+      +  K   AIK+++   S N +R+ A  E++VL +L  H      
Sbjct: 10  IGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAG-ELEVLCKLGHH----PN 64

Query: 155 CVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELG-------RQLLE 205
            + +    + R ++ I  E   P  +L DFLRK+          +E G       +QLL+
Sbjct: 65  IINLLGACENRGYLYIAIE-YAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQ 123

Query: 206 -------SVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
                   + ++ E + IH DL   N+L+      K+ D+
Sbjct: 124 FASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADF 163

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 36/153 (23%), Positives = 71/153 (46%), Gaps = 14/153 (9%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMI--EIDVLQRLARHD 149
           + +L  +G+G FG+V      + K++ A+K +      +      +  E  +LQ L  H 
Sbjct: 2   FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL-NHP 60

Query: 150 IGGTRCVQIRNWFDYRNHICIVFE-KLGPSL-YDFLRKNSYRSFPIDLVRELGRQLLESV 207
                 V +   F    ++ +V +  LG  L Y   +K     F  + V+    +++ ++
Sbjct: 61  F----LVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLAL 113

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
            ++H   +IH D+KP+NILL    +V + D+ +
Sbjct: 114 EYLHSKGIIHRDIKPDNILLDEQGHVHITDFNI 146

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 41.6 bits (97), Expect = 2e-04
 Identities = 35/152 (23%), Positives = 74/152 (48%), Gaps = 11/152 (7%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           + ++ ++G GT+G V +  +    EL AIK+++ +    + A+++ +++      D   +
Sbjct: 11  FELIQRIGSGTYGDVYKARNVNTGELAAIKVIK-LEPGEDFAVVQQEIIMM---KDCKHS 66

Query: 154 RCVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPID--LVRELGRQLLESVAFM 210
             V     +  R+ + I  E  G  SL D      + + P+    +  + R+ L+ + ++
Sbjct: 67  NIVAYFGSYLRRDKLWICMEFCGGGSLQDIY----HVTGPLSESQIAYVSRETLQGLYYL 122

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           H    +H D+K  NILL    +VK+ D+ V +
Sbjct: 123 HSKGKMHRDIKGANILLTDNGHVKLADFGVSA 154

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 41.5 bits (97), Expect = 2e-04
 Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 9/141 (6%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK---IVRSINKYREAAMIEIDVLQRLARHD 149
           RY I+ K+GEG+FG++         E   IK   + +   K +EA+  E+ +L ++   +
Sbjct: 1   RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPN 60

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I     V     F     + IV E   G  L   + +     F  D +     Q+   + 
Sbjct: 61  I-----VTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLK 115

Query: 209 FMHELRLIHTDLKPENILLVS 229
            +H+ +++H D+K +NI L  
Sbjct: 116 HIHDRKILHRDIKSQNIFLSK 136

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 20/151 (13%)

Query: 100 MGEGTFGQVVE--CFDNEKKEL---VAIKIVRSINKY--REAAMIEIDVLQRLARHDIGG 152
           +G G FG+VVE   +   K +    VA+K+++       REA M E+ ++  L  H+   
Sbjct: 43  LGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHE--- 99

Query: 153 TRCVQIRNWFDYRNH---ICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
                I N          I ++ E    G  L +FLR+       ++ +     Q+ + +
Sbjct: 100 ----NIVNLLGACTIGGPILVITEYCCYG-DLLNFLRRKRESFLTLEDLLSFSYQVAKGM 154

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           AF+     IH DL   N+LL   + VK+ D+
Sbjct: 155 AFLASKNCIHRDLAARNVLLTHGKIVKICDF 185

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)

Query: 176 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY-VK 234
              L+D L+K          V+++ RQL+E++  +H+  +IH D+K EN+L   A+  + 
Sbjct: 93  DGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIY 150

Query: 235 VPDY 238
           + DY
Sbjct: 151 LCDY 154

Length = 267

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 41.6 bits (97), Expect = 2e-04
 Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 27/160 (16%)

Query: 100 MGEGTFGQVVECFDNEK--KELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGTR 154
           +GEG FGQV++    +   +   AIK ++   S + +R+ A  E++VL +L  H      
Sbjct: 3   IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAG-ELEVLCKLGHH----PN 57

Query: 155 CVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELG-------RQLLE 205
            + +    ++R ++ +  E   P  +L DFLRK+                     +QLL 
Sbjct: 58  IINLLGACEHRGYLYLAIE-YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 116

Query: 206 -------SVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
                   + ++ + + IH DL   NIL+      K+ D+
Sbjct: 117 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADF 156

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 41.6 bits (97), Expect = 2e-04
 Identities = 37/151 (24%), Positives = 71/151 (47%), Gaps = 13/151 (8%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI----EIDVLQRLARHD 149
           + IL  +G G FG+V         ++ A+KI+      + A       E DVL       
Sbjct: 3   FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN----- 57

Query: 150 IGGTRCVQIRNW-FDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
            G  + +   ++ F   N++ +V +  +G  L   L K   R  P D+ R    +++ ++
Sbjct: 58  -GDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDR-LPEDMARFYLAEMVIAI 115

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
             +H+L  +H D+KP+NIL+    ++++ D+
Sbjct: 116 DSVHQLHYVHRDIKPDNILMDMNGHIRLADF 146

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 19/78 (24%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 162 FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL 220
           F  ++++ +V E L G      ++       P D  ++   +++  V  +H+  +IH D+
Sbjct: 66  FQSKDYLYLVMEYLNGGDCASLIKTLGG--LPEDWAKQYIAEVVLGVEDLHQRGIIHRDI 123

Query: 221 KPENILLVSAEYVKVPDY 238
           KPEN+L+    ++K+ D+
Sbjct: 124 KPENLLIDQTGHLKLTDF 141

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 41.1 bits (96), Expect = 2e-04
 Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 10/144 (6%)

Query: 99  KMGEGTFGQVVE-CFDNEKKEL-VAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTR 154
           ++G G FG V +  +   KK++ VAIK++++ N+   R+  M E +++ +L    I    
Sbjct: 2   ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYI---- 57

Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
            V++    +    + ++    G  L  FL         +  V EL  Q+   + ++    
Sbjct: 58  -VRMIGVCEAEALMLVMEMASGGPLNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGKN 115

Query: 215 LIHTDLKPENILLVSAEYVKVPDY 238
            +H DL   N+LLV+  Y K+ D+
Sbjct: 116 FVHRDLAARNVLLVNQHYAKISDF 139

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 10/143 (6%)

Query: 98  SKMGEGTFGQVVE-CFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           + +G+G FG V+   +  +K   VA+K ++  +   +A + E  V+  L RH       V
Sbjct: 12  ATIGKGEFGDVMLGDYRGQK---VAVKCLKDDSTAAQAFLAEASVMTTL-RHP----NLV 63

Query: 157 QIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           Q+       N + IV E +   SL D+LR        +         + E + ++ E   
Sbjct: 64  QLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNF 123

Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           +H DL   N+L+      KV D+
Sbjct: 124 VHRDLAARNVLVSEDLVAKVSDF 146

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 40.7 bits (95), Expect = 3e-04
 Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 8/148 (5%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIK---IVRSINKYREAAMIEIDVLQRLARHDI 150
           Y  +  +G+G++G+V         +   IK   +  +  + R+AA  E  +L +L   +I
Sbjct: 2   YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNI 61

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
              R     +W      + IV     G  LY  L++   +  P + V E   Q+  ++ +
Sbjct: 62  VAYR----ESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQY 117

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPD 237
           +HE  ++H DLK +N+ L     +KV D
Sbjct: 118 LHEKHILHRDLKTQNVFLTRTNIIKVGD 145

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 40.9 bits (95), Expect = 3e-04
 Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 16/151 (10%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARHDIG 151
           +Y    K+G+G  G V    D    + VAIK +    + ++  +I EI V++        
Sbjct: 20  KYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRE------- 72

Query: 152 GTRCVQIRNWFDYR---NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
             +   I N+ D     + + +V E L G SL D + +       I  V    R+ L+++
Sbjct: 73  -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQAL 128

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            F+H  ++IH D+K +NILL     VK+ D+
Sbjct: 129 DFLHSNQVIHRDIKSDNILLGMDGSVKLTDF 159

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 41.0 bits (96), Expect = 4e-04
 Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 14/143 (9%)

Query: 90  LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-----EIDVLQR 144
           +T RY  L  +G G FG V    D    + VAIK  + +  +    +      E+ +L+ 
Sbjct: 8   ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIK--KIMKPFSTPVLAKRTYRELKLLKH 65

Query: 145 LARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
           L   +I     + I    D    I  V E LG  L+  L     R      ++    Q+L
Sbjct: 66  LRHENIISLSDIFISPLED----IYFVTELLGTDLHRLLTS---RPLEKQFIQYFLYQIL 118

Query: 205 ESVAFMHELRLIHTDLKPENILL 227
             + ++H   ++H DLKP NIL+
Sbjct: 119 RGLKYVHSAGVVHRDLKPSNILI 141

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 12/151 (7%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRL--AR 147
           +R L+ +G G FG+V+     +  EL AIK ++          E+ M E  + +     R
Sbjct: 1   FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSER 60

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           H       V +   F   +H+C V E    +  D +       F           ++  +
Sbjct: 61  HPF----LVNLFACFQTEDHVCFVMEYA--AGGDLMMHIHTDVFSEPRAVFYAACVVLGL 114

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            ++HE ++++ DLK +N+LL +  +VK+ D+
Sbjct: 115 QYLHENKIVYRDLKLDNLLLDTEGFVKIADF 145

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 40.9 bits (95), Expect = 4e-04
 Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 16/151 (10%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARHDIG 151
           +Y    K+G+G  G V    D    + VAI+ +    + ++  +I EI V++        
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE------- 73

Query: 152 GTRCVQIRNWFDYR---NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
             +   I N+ D     + + +V E L G SL D + +       I  V    R+ L+++
Sbjct: 74  -NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQAL 129

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            F+H  ++IH D+K +NILL     VK+ D+
Sbjct: 130 EFLHSNQVIHRDIKSDNILLGMDGSVKLTDF 160

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 40.8 bits (95), Expect = 4e-04
 Identities = 37/158 (23%), Positives = 73/158 (46%), Gaps = 13/158 (8%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV----RSINKYREAAMIEIDVLQRLARHDIGG 152
           L ++G G+FG V    ++   E+VA+K +    +  N+  +  + E+  LQ+L   +   
Sbjct: 26  LHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNT-- 83

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
              ++ +  +   +   +V E    S  D L  +      +++   +    L+ +A++H 
Sbjct: 84  ---IEYKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-AITHGALQGLAYLHS 139

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAF 247
             +IH D+K  NILL     VK+ D+      SP ++F
Sbjct: 140 HNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSF 177

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 40.2 bits (94), Expect = 5e-04
 Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 24/152 (15%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSI-------NKYREAAMIEIDVLQRLARHDI-- 150
           +G G F    +  D +   L+A+K V  +        +  EA   EI ++ RL    I  
Sbjct: 8   LGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIR 67

Query: 151 --GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
             G T            +H  +  E + G S+   L K  Y +F   ++     QLL  +
Sbjct: 68  MLGATC---------EDSHFNLFVEWMAGGSVSHLLSK--YGAFKEAVIINYTEQLLRGL 116

Query: 208 AFMHELRLIHTDLKPENILLVS-AEYVKVPDY 238
           +++HE ++IH D+K  N+L+ S  + +++ D+
Sbjct: 117 SYLHENQIIHRDVKGANLLIDSTGQRLRIADF 148

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 39.9 bits (94), Expect = 7e-04
 Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 18/158 (11%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDI 150
           Y +L  +G+G+FG V +       +++  K +   N   K ++  + E+++L+ L   +I
Sbjct: 2   YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNI 61

Query: 151 GGTRCVQIRNWF-DYRNH-ICIVFEKL-GPSLYDFLRK--NSYRSFPIDLVRELGRQLLE 205
                V+  +   D  N  + IV E   G  L   ++K     +    + +  +  QLL 
Sbjct: 62  -----VRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLL 116

Query: 206 SVAFMHEL-----RLIHTDLKPENILLVSAEYVKVPDY 238
           ++   H        ++H DLKP NI L +   VK+ D+
Sbjct: 117 ALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDF 154

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 40.0 bits (93), Expect = 7e-04
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 15/154 (9%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLARHDIG 151
           Y ++ ++G GT+G V +  +    EL A+KI++ +    + ++I  EI +++     +I 
Sbjct: 11  YELIQRVGSGTYGDVYKARNLHTGELAAVKIIK-LEPGDDFSLIQQEIFMVKECKHCNI- 68

Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPID--LVRELGRQLLESVA 208
               V     +  R  + I  E  G  SL D      + + P+    +  + R+ L+ +A
Sbjct: 69  ----VAYFGSYLSREKLWICMEYCGGGSLQDIY----HVTGPLSELQIAYVCRETLQGLA 120

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           ++H    +H D+K  NILL     VK+ D+ V +
Sbjct: 121 YLHSKGKMHRDIKGANILLTDNGDVKLADFGVAA 154

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 40.2 bits (94), Expect = 7e-04
 Identities = 36/148 (24%), Positives = 69/148 (46%), Gaps = 12/148 (8%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMI-EIDVLQRLARHDIG 151
           I+  +  G FG+V         +L A+K+V+    INK     +  E D L  L++    
Sbjct: 8   IVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALA-LSKSPF- 65

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               V +       N++ +V E L G  +   L    Y  F  ++  +   ++  ++ ++
Sbjct: 66  ---IVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGY--FDEEMAVKYISEVALALDYL 120

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H   +IH DLKP+N+L+ +  ++K+ D+
Sbjct: 121 HRHGIIHRDLKPDNMLISNEGHIKLTDF 148

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 22/150 (14%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEID------VLQRLARHDI 150
           L ++G G FG VV       K  VAIK++R      E AM E D      V+ +L+  ++
Sbjct: 9   LKELGSGQFG-VVHLGKWRGKIDVAIKMIR------EGAMSEDDFIEEAKVMMKLSHPNL 61

Query: 151 GGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                VQ+      +  I IV E    G  L ++LR+   +    + + ++   + E++ 
Sbjct: 62  -----VQLYGVCTKQRPIFIVTEYMANG-CLLNYLRERKGK-LGTEWLLDMCSDVCEAME 114

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++     IH DL   N L+     VKV D+
Sbjct: 115 YLESNGFIHRDLAARNCLVGEDNVVKVSDF 144

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 52/192 (27%)

Query: 97  LSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDI 150
           L  +G+G+FG+V    +    +  +L A+K+++      + R    +E D+L        
Sbjct: 1   LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDIL-------- 52

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLY---DFLRKNSYRSFPIDLVRELGRQLL--- 204
                 ++ + F  + H    F+  G  LY   DFLR         DL   L ++++   
Sbjct: 53  -----AEVNHPFIVKLHY--AFQTEG-KLYLILDFLRGG-------DLFTRLSKEVMFTE 97

Query: 205 ESVAF-----------MHELRLIHTDLKPENILLVSAEYVKVPDY-----KVPSPRHAFS 248
           E V F           +H L +I+ DLKPENILL    ++K+ D+      +   + A+S
Sbjct: 98  EDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS 157

Query: 249 F-QTFLSMASRV 259
           F  T   MA  V
Sbjct: 158 FCGTVEYMAPEV 169

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 36/177 (20%)

Query: 92  PRYRIL--SKMGEGTFGQVVEC---------------FDNEKKELVAIKIVRS-INKY-R 132
           PR ++    K+GEG FG+V  C               FD  +  LVA+K++R+ + K  R
Sbjct: 3   PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDG-QPVLVAVKMLRADVTKTAR 61

Query: 133 EAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRK------ 185
              + EI ++ RL   +I     V + +     + +C++ E +    L  FL +      
Sbjct: 62  NDFLKEIKIMSRLKNPNIIRLLGVCVSD-----DPLCMITEYMENGDLNQFLSQREIEST 116

Query: 186 ----NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
               N+  S  I  +  +  Q+   + ++  L  +H DL   N L+ +   +K+ D+
Sbjct: 117 FTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADF 173

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 38.7 bits (90), Expect = 0.001
 Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 8/144 (5%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRC 155
            L ++G G FG VV+      +  VAIK+++  +   +  + E  V+ +L+   +     
Sbjct: 8   FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKL----- 61

Query: 156 VQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           VQ+      +  I IV E +    L ++LR++  R  P  L+ E+ + + E +A++   +
Sbjct: 62  VQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLL-EMCKDVCEGMAYLESKQ 120

Query: 215 LIHTDLKPENILLVSAEYVKVPDY 238
            IH DL   N L+     VKV D+
Sbjct: 121 FIHRDLAARNCLVDDQGCVKVSDF 144

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 33/151 (21%), Positives = 71/151 (47%), Gaps = 13/151 (8%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           + + S +G G FG+V    +    ++ A+K+++     +   + +  V       DI   
Sbjct: 3   FDVKSLVGRGHFGEVQVVREKATGDIYAMKVMK-----KSVLLAQETVSFFEEERDILSI 57

Query: 154 R----CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRS-FPIDLVRELGRQLLESV 207
                  Q++  F  ++++ +V E   G  L   L  N Y   F  D+ +    +L+ ++
Sbjct: 58  SNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLL--NRYEDQFDEDMAQFYLAELVLAI 115

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
             +H++  +H D+KPEN+L+    ++K+ D+
Sbjct: 116 HSVHQMGYVHRDIKPENVLIDRTGHIKLADF 146

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|226168 COG3642, COG3642, Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 10/61 (16%)

Query: 170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV 228
           IV E + G  L D L +        DL+RE+GR     V  +H+  ++H DL   NI+L 
Sbjct: 76  IVMEYIEGELLKDALEEARP-----DLLREVGRL----VGKLHKAGIVHGDLTTSNIILS 126

Query: 229 S 229
            
Sbjct: 127 G 127

Length = 204

>gnl|CDD|237847 PRK14879, PRK14879, serine/threonine protein kinase; Provisional

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 8/67 (11%)

Query: 162 FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL 220
            D  N I IV E + G  L D +  NS     ++L RE+GR     V  +H   +IH DL
Sbjct: 69  VDPENFI-IVMEYIEGEPLKDLI--NSNGMEELELSREIGRL----VGKLHSAGIIHGDL 121

Query: 221 KPENILL 227
              N++L
Sbjct: 122 TTSNMIL 128

Length = 211

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 38.9 bits (90), Expect = 0.002
 Identities = 15/46 (32%), Positives = 31/46 (67%)

Query: 193 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           I++++ + RQ+L  +  +H + ++H D+KPEN+L+     VK+ D+
Sbjct: 308 INVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDF 353

Length = 507

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 38.4 bits (89), Expect = 0.002
 Identities = 33/146 (22%), Positives = 70/146 (47%), Gaps = 16/146 (10%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEID--VLQRLARHDIGGTRCVQ 157
           +G+G+FG+V++     K++   I  +++I K    +  E+   + +R     +     V 
Sbjct: 1   IGKGSFGKVMQV---RKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVP 57

Query: 158 IRNWFDYRNHICIVFEKL-GPSLYDFLRK----NSYRSFPIDLVRELGRQLLESVAFMHE 212
           ++  F     + +V   + G  L+  L++    +  R+      R    +LL ++  +H+
Sbjct: 58  LKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRA------RFYTAELLCALENLHK 111

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDY 238
             +I+ DLKPENILL    ++ + D+
Sbjct: 112 FNVIYRDLKPENILLDYQGHIALCDF 137

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 38.4 bits (89), Expect = 0.002
 Identities = 39/173 (22%), Positives = 74/173 (42%), Gaps = 43/173 (24%)

Query: 100 MGEGTFGQVVECFDNEKKEL-----VAIKIVR---SINKYREAAMIEIDVLQRLARHDI- 150
           +GEG FG+VV+      K       VA+K+++   S ++ R   + E ++L+++    + 
Sbjct: 8   LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELR-DLLSEFNLLKQVNHPHVI 66

Query: 151 ---GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLR---------------KNSY---- 188
              G   C Q     D    + + + K G SL  FLR               +NS     
Sbjct: 67  KLYGA--CSQ-----DGPLLLIVEYAKYG-SLRSFLRESRKVGPSYLGSDGNRNSSYLDN 118

Query: 189 ---RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
              R+  +  +     Q+   + ++ E++L+H DL   N+L+     +K+ D+
Sbjct: 119 PDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDF 171

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 38.5 bits (89), Expect = 0.002
 Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 24/156 (15%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDI-- 150
           +  L  +G G FG+V      +   + A+KI+R      +A M+E + +  + A  DI  
Sbjct: 3   FESLKVIGRGAFGEVRLVQKKDTGHIYAMKILR------KADMLEKEQVAHIRAERDILV 56

Query: 151 --GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES- 206
              G   V++   F  + ++ ++ E L G  +   L K        D + E   Q   + 
Sbjct: 57  EADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKK-------DTLSEEATQFYIAE 109

Query: 207 ----VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
               +  +H+L  IH D+KP+N+LL +  +VK+ D+
Sbjct: 110 TVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDF 145

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 38.0 bits (88), Expect = 0.003
 Identities = 42/150 (28%), Positives = 76/150 (50%), Gaps = 19/150 (12%)

Query: 100 MGEGTFGQVVEC-FDNE---KKELVAIKIVRSINKYREAAMI--EIDVLQRLARHDIGGT 153
           +GEG FG+V  C +D E     E VA+K ++  +     A +  EI++L+ L   +I   
Sbjct: 12  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 71

Query: 154 R--CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL--GRQLLESVA 208
           +  C +     D  N I ++ E L   SL ++L +N  +   I+L ++L    Q+ + + 
Sbjct: 72  KGICTE-----DGGNGIKLIMEFLPSGSLKEYLPRNKNK---INLKQQLKYAVQICKGMD 123

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++   + +H DL   N+L+ S   VK+ D+
Sbjct: 124 YLGSRQYVHRDLAARNVLVESEHQVKIGDF 153

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 38.4 bits (89), Expect = 0.003
 Identities = 38/151 (25%), Positives = 69/151 (45%), Gaps = 9/151 (5%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINK--YREAAMIEIDVLQRLARHD 149
           RYR L ++G G +G V    D      VAIK + R      + + A  E+ +L+ + +H+
Sbjct: 16  RYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-KHE 74

Query: 150 --IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
             IG           D  +   +V   +G  L   ++   +     D ++ L  Q+L+ +
Sbjct: 75  NVIGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMK---HEKLSEDRIQFLVYQMLKGL 131

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 132 KYIHAAGIIHRDLKPGNLAVNEDCELKILDF 162

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 37.8 bits (88), Expect = 0.003
 Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 10/150 (6%)

Query: 92  PRYRI--LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD 149
           PR  +    K+GEG+ G V    D      VA+K +    + R   +    V+ R  +H 
Sbjct: 17  PRSYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHP 76

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                 V++ + +   + + +V E L G +L D +         I  V      +L++++
Sbjct: 77  ----NIVEMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATV---CLAVLKALS 129

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           F+H   +IH D+K ++ILL S   VK+ D+
Sbjct: 130 FLHAQGVIHRDIKSDSILLTSDGRVKLSDF 159

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 37.9 bits (88), Expect = 0.003
 Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 16/152 (10%)

Query: 94  YRILSKMGEGTFGQV--VECFDNEKKELVAIKIVRSINKYREAAMI----EIDVLQRLAR 147
           +  +  +G+G FG+V  V+  D  K  + A+K +     +++  +     E DVL   A 
Sbjct: 3   FHTVKVIGKGAFGEVRLVQKKDTGK--IYAMKTLLKSEMFKKDQLAHVKAERDVL---AE 57

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
            D      V +   F    ++ ++ E L G  L   L K  Y +F  D+ R    + + +
Sbjct: 58  SD--SPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIK--YDTFSEDVTRFYMAECVLA 113

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +  +H+L  IH D+KP+NIL+    ++K+ D+
Sbjct: 114 IEAVHKLGFIHRDIKPDNILIDRGGHIKLSDF 145

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 37.5 bits (87), Expect = 0.004
 Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 20/161 (12%)

Query: 94  YRILSKMGEGTFGQVVEC-FDNEKKELVAIKIV-----------RSINKYREAAMIEIDV 141
           Y +L  +G G FG V +    N  + L+A+K +           R  +K     + E+ +
Sbjct: 2   YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTI 61

Query: 142 LQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLR--KNSYRSFPIDLVRE 198
           ++   RH       V+    F   + + IV + + G  L +     K   + F  + +  
Sbjct: 62  IKEQLRH----PNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWN 117

Query: 199 LGRQLLESVAFMH-ELRLIHTDLKPENILLVSAEYVKVPDY 238
           +  Q++ ++ ++H E R++H DL P NI+L   + V + D+
Sbjct: 118 IFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDF 158

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 37.7 bits (87), Expect = 0.004
 Identities = 20/60 (33%), Positives = 37/60 (61%), Gaps = 1/60 (1%)

Query: 179 LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           L D++R+N  R    DL+     Q+ + ++++ E+RL+H DL   N+L+ S  +VK+ D+
Sbjct: 95  LLDYVRENKDRIGSQDLL-NWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDF 153

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 37.7 bits (87), Expect = 0.004
 Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 12/147 (8%)

Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI----GG 152
           +  +G G FG+V      + K L A+K +R     ++  ++   V    A  DI      
Sbjct: 6   IKTLGIGAFGEVCLARKVDTKALYAMKTLR-----KKDVLLRNQVAHVKAERDILAEADN 60

Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F  ++++  V + + G  +   L +     FP DL R    +L  +V  +H
Sbjct: 61  EWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGI--FPEDLARFYIAELTCAVESVH 118

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++  IH D+KP+NIL+    ++K+ D+
Sbjct: 119 KMGFIHRDIKPDNILIDRDGHIKLTDF 145

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 37.6 bits (87), Expect = 0.004
 Identities = 31/136 (22%), Positives = 64/136 (47%), Gaps = 16/136 (11%)

Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-------EAAMIEIDVLQRLARHDIGG 152
           +G+G FG+V         ++ A K    ++K R       + A++E ++L+++    I  
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACK---KLDKKRLKKKSGEKMALLEKEILEKVNSPFI-- 55

Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V +   F+ + H+C+V   + G  L   +     R   ++ V     Q+   +  +H
Sbjct: 56  ---VNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLH 112

Query: 212 ELRLIHTDLKPENILL 227
            + +++ D+KPEN+LL
Sbjct: 113 SMDIVYRDMKPENVLL 128

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	264
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
PTZ00284	467	protein kinase; Provisional	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.98
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.98
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.98
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.98
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.98
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.98
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.98
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.97
KOG0586	596	consensus Serine/threonine protein kinase [General	99.97
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.97
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.97
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.97
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.97
KOG0610	459	consensus Putative serine/threonine protein kinase	99.97
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.97
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.97
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.97
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.97
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.97
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.97
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.97
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.97
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.97
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.97
PHA03210	501	serine/threonine kinase US3; Provisional	99.97
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.97
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.97
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.97
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.97
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.97
KOG1152	772	consensus Signal transduction serine/threonine kin	99.97
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.97
PTZ00267	478	NIMA-related protein kinase; Provisional	99.97
PHA03209	357	serine/threonine kinase US3; Provisional	99.97
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.97
PTZ00036	440	glycogen synthase kinase; Provisional	99.97
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.97
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.97
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.97
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.97
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.97
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.97
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.97
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.97
PHA03207	392	serine/threonine kinase US3; Provisional	99.97
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.97
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.97
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.97
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.97
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.97
PTZ00283	496	serine/threonine protein kinase; Provisional	99.97
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.97
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.97
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.97
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.97
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.97
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.97
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.97
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.97
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.97
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.97
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.97
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.97
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.97
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.97
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.97
KOG0584	632	consensus Serine/threonine protein kinase [General	99.97
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.97
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.97
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.97
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.97
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.97
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.97
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.97
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.97
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.97
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.97
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.97
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.97
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.97
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.97
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.97
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.97
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.97
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.97
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.97
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.97
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.97
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.97
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.97
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.97
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.96
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.96
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.96
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.96
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.96
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.96
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.96
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.96
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.96
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.96
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.96
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.96
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.96
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.96
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.96
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.96
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.96
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.96
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.96
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.96
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.96
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.96
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.96
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.96
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.96
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.96
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.96
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.96
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.96
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.96
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.96
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.96
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.96
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.96
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.96
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.96
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.96
PLN00009	294	cyclin-dependent kinase A; Provisional	99.96
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.96
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.96
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.96
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.96
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.96
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.96
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.96
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.96
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.96
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.96
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.96
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.96
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.96
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.96
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.96
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.96
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.96
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.96
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.96
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.96
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.96
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.96
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.96
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.96
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.96
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.96
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.96
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.96
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.96
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.96
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.96
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.96
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.96
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.96
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.96
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.96
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.96
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.96
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.96
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.96
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.96
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.96
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.96
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.96
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.96
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.96
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.96
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.96
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.96
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.96
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.96
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.96
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.96
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.96
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.96
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.96
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.96
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.96
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.96
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.96
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.96
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.96
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.96
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.96
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.96
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.96
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.96
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.96
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.96
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.96
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.96
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.96
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.96
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.96
PRK09188	365	serine/threonine protein kinase; Provisional	99.96
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.96
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.96
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.96
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.96
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.96
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.96
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.96
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.96
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.96
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.96
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.96
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.96
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.96
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.96
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.96
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.96
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.96
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.96
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.96
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.95
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.95
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.95
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.95
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.95
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.95
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.95
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.95
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.95
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.95
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.95
PHA02988	283	hypothetical protein; Provisional	99.95
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.95
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.95
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.95
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.95
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.95
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.95
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.95
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.95
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.95
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.95
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.95
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.95
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.95
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.95
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.95
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.95
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.95
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.95
KOG3653	534	consensus Transforming growth factor beta/activin	99.95
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.95
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.95
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.95
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.95
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.95
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.95
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.95
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.95
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.95
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.95
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.95
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.95
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.95
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.95
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.95
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.95
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.95
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.95
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.95
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.95
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.95
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.95
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.95
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.95
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.95
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.95
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.95
PHA02882	294	putative serine/threonine kinase; Provisional	99.95
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.95
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.95
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.95
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.95
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.95
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.95
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.95
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.95
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.95
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.95
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.95
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.95
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.95
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.95
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.95
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.95
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.95
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.95
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.95
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.94
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.94
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.94
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.94
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.94
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.94
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.94
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.94
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.94
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.94
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.94
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.94
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.94
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.93
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.93
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.93
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.93
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.93
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.93
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.93
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.93
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.92
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.92
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.92
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.92
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.91
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.91
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.91
PRK10345	210	hypothetical protein; Provisional	99.91
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.91
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.91
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.9
smart00090	237	RIO RIO-like kinase.	99.89
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.89
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.89
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.88
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.87
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.87
PRK12274	218	serine/threonine protein kinase; Provisional	99.86
PRK14879	211	serine/threonine protein kinase; Provisional	99.86
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.85
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.85
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.85
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.84
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.82
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.81
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.79
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.78
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.77
PLN00181	793	protein SPA1-RELATED; Provisional	99.75
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.74
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.69
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.69
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.66
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.66
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.66
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.64
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.62
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.57
KOG3087	229	consensus Serine/threonine protein kinase [General	99.56
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.55
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.49
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.42
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.42
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.41
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.38
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.33
PRK09902	216	hypothetical protein; Provisional	99.32
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.32
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.27
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.26
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.24
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.23
COG0478	304	RIO-like serine/threonine protein kinase fused to	99.23
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	99.17
KOG1243	690	consensus Protein kinase [General function predict	99.17
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	99.08
COG0661	517	AarF Predicted unusual protein kinase [General fun	99.08
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	99.03
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	99.02
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.98
PF01636	239	APH: Phosphotransferase enzyme family This family	98.93
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.89
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	98.86
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	98.8
KOG1235	538	consensus Predicted unusual protein kinase [Genera	98.67
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.65
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	98.57
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.56
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	98.54
PLN02876	822	acyl-CoA dehydrogenase	98.52
KOG2270	520	consensus Serine/threonine protein kinase involved	98.39
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.35
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	98.29
PRK05231	319	homoserine kinase; Provisional	98.27
KOG2268	465	consensus Serine/threonine protein kinase [Signal	98.25
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	98.24
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	98.18
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	98.18
PRK09550	401	mtnK methylthioribose kinase; Reviewed	98.16
PRK10593	297	hypothetical protein; Provisional	98.15
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	98.14
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	97.94
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.92
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	97.79
PLN02236	344	choline kinase	97.72
COG4248	637	Uncharacterized protein with protein kinase and he	97.66
PRK11768	325	serine/threonine protein kinase; Provisional	97.66
PRK12396	409	5-methylribose kinase; Reviewed	97.63
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	97.62
KOG0576	829	consensus Mitogen-activated protein kinase kinase	97.59
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	97.55
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	97.51
PLN02756	418	S-methyl-5-thioribose kinase	97.4
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	97.38
KOG2137	700	consensus Protein kinase [Signal transduction mech	97.33
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	97.29
PTZ00384	383	choline kinase; Provisional	97.26
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	97.2
COG2334	331	Putative homoserine kinase type II (protein kinase	97.02
PRK06148	1013	hypothetical protein; Provisional	96.89
PTZ00296	442	choline kinase; Provisional	96.73
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	96.65
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	96.52
PRK10271	188	thiK thiamine kinase; Provisional	96.25
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	96.15
KOG1236	565	consensus Predicted unusual protein kinase [Genera	96.1
KOG2269	531	consensus Serine/threonine protein kinase [Signal	96.0

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=2e-43  Score=288.67  Aligned_cols=165  Identities=28%  Similarity=0.451  Sum_probs=151.6

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      ..++|.+.++||+|+|++||+|+++.++..||||.+.+.   .+..+.+..|+.+|+.++|+|+     |+++++..+.+
T Consensus         8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nI-----V~l~d~~~~~~   82 (429)
T KOG0595|consen    8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNI-----VRLLDCIEDDD   82 (429)
T ss_pred             ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcce-----eeEEEEEecCC
Confidence            346799999999999999999999999999999998754   4567788999999999999988     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC------CcEEeccCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA------EYVKVPDYK  239 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~------~~v~l~Dfg  239 (264)
                      ++||||||| ||+|.+|+++.+  .+++..++.++.||+.||++||+++||||||||+||||+..      -.+||+|||
T Consensus        83 ~i~lVMEyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFG  160 (429)
T KOG0595|consen   83 FIYLVMEYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFG  160 (429)
T ss_pred             eEEEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccc
Confidence            999999999 999999999987  89999999999999999999999999999999999999975      358999999


Q ss_pred             CCCcCCCC-----cccceeeeeceeEe
Q 024661          240 VPSPRHAF-----SFQTFLSMASRVYI  261 (264)
Q Consensus       240 ~a~~~~~~-----~~~~~~y~ape~~~  261 (264)
                      +|+..++.     -+|++.|||||+++
T Consensus       161 fAR~L~~~~~a~tlcGSplYMAPEV~~  187 (429)
T KOG0595|consen  161 FARFLQPGSMAETLCGSPLYMAPEVIM  187 (429)
T ss_pred             hhhhCCchhHHHHhhCCccccCHHHHH
Confidence            99987764     47999999999874

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.9e-41  Score=274.26  Aligned_cols=168  Identities=29%  Similarity=0.467  Sum_probs=152.2

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh--------hHHHHHHHHHHHHHHhccCCCCcceEEEc
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--------YREAAMIEIDVLQRLARHDIGGTRCVQIR  159 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--------~~~~~~~e~~~l~~l~~~~~~~~~~~~~~  159 (264)
                      ..+.+.|.+.+.||+|+||.|.+|..+.+|+.||||++++...        ......+|+++|+.++||++     |+++
T Consensus       168 ks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~I-----V~~~  242 (475)
T KOG0615|consen  168 KSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNI-----VRIK  242 (475)
T ss_pred             chhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCE-----EEEe
Confidence            3567889999999999999999999999999999999985431        22345799999999999998     9999


Q ss_pred             eeeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC---CcEEe
Q 024661          160 NWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA---EYVKV  235 (264)
Q Consensus       160 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~---~~v~l  235 (264)
                      ++|+..+..||||||+ ||+|++.+..++  .+.+.....++.|++.|+.|||++||+||||||+|||+..+   ..+||
T Consensus       243 d~f~~~ds~YmVlE~v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKI  320 (475)
T KOG0615|consen  243 DFFEVPDSSYMVLEYVEGGELFDKVVANK--YLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKI  320 (475)
T ss_pred             eeeecCCceEEEEEEecCccHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEe
Confidence            9999999999999999 999999999887  78889999999999999999999999999999999999977   78999


Q ss_pred             ccCCCCCcCCC-----CcccceeeeeceeEee
Q 024661          236 PDYKVPSPRHA-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       236 ~Dfg~a~~~~~-----~~~~~~~y~ape~~~~  262 (264)
                      +|||+|.....     ..|||+.|.|||++++
T Consensus       321 tDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~  352 (475)
T KOG0615|consen  321 TDFGLAKVSGEGSFMKTLCGTPSYVAPEVLAS  352 (475)
T ss_pred             cccchhhccccceehhhhcCCccccChhheec
Confidence            99999988643     4589999999999976

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-41  Score=272.65  Aligned_cols=165  Identities=24%  Similarity=0.392  Sum_probs=150.9

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      .++|+++++||+|+||+||+++.+.+++.+|+|++++..    ........|..+|..++||.+     |.++..|++.+
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFi-----v~l~ysFQt~~   98 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFI-----VKLIYSFQTEE   98 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcE-----eeeEEecccCC
Confidence            367999999999999999999999999999999998643    345678899999999998887     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC-
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR-  244 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~-  244 (264)
                      .+|+|+||+ ||.|...|++..  .|+|..++.|+.+|+.||.|||++|||||||||+|||+|.+|+++|+|||+|+.. 
T Consensus        99 kLylVld~~~GGeLf~hL~~eg--~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~  176 (357)
T KOG0598|consen   99 KLYLVLDYLNGGELFYHLQREG--RFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDL  176 (357)
T ss_pred             eEEEEEeccCCccHHHHHHhcC--CcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence            999999999 999999999876  8999999999999999999999999999999999999999999999999999852 


Q ss_pred             -----CCCcccceeeeeceeEee
Q 024661          245 -----HAFSFQTFLSMASRVYIC  262 (264)
Q Consensus       245 -----~~~~~~~~~y~ape~~~~  262 (264)
                           ....+||..|||||+++.
T Consensus       177 ~~~~~t~tfcGT~eYmAPEil~~  199 (357)
T KOG0598|consen  177 KDGDATRTFCGTPEYMAPEILLG  199 (357)
T ss_pred             cCCCccccccCCccccChHHHhc
Confidence                 234589999999998753

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=6.2e-40  Score=280.05  Aligned_cols=163  Identities=29%  Similarity=0.420  Sum_probs=153.0

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEec----hhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      .+|..++.||+|+|+.||.+++..+|+.||+|++.+    .....+.+.+||++.+.|+|+||     |+++++|++.++
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnI-----V~f~~~FEDs~n   92 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNI-----VQFYHFFEDSNN   92 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcE-----EeeeeEeecCCc
Confidence            679999999999999999999999999999999986    45677889999999999999998     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      +|||+|+| .++|..+++..+  .++|.+++.++.||+.||.|||+++|+|||||..|+|++++.+|||+|||+|+....
T Consensus        93 VYivLELC~~~sL~el~Krrk--~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~  170 (592)
T KOG0575|consen   93 VYIVLELCHRGSLMELLKRRK--PLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY  170 (592)
T ss_pred             eEEEEEecCCccHHHHHHhcC--CCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecC
Confidence            99999999 999999999766  899999999999999999999999999999999999999999999999999987553


Q ss_pred             ------CcccceeeeeceeEe
Q 024661          247 ------FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ------~~~~~~~y~ape~~~  261 (264)
                            .-|||+.|+|||++.
T Consensus       171 ~~Erk~TlCGTPNYIAPEVl~  191 (592)
T KOG0575|consen  171 DGERKKTLCGTPNYIAPEVLN  191 (592)
T ss_pred             cccccceecCCCcccChhHhc
Confidence                  458999999999874

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=5.4e-39  Score=260.24  Aligned_cols=164  Identities=24%  Similarity=0.347  Sum_probs=149.4

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEe--chhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC-EE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN-HI  168 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~  168 (264)
                      ++.+.++.||+|+.|+||+++++.+++.+|+|++.  .+....+++.+|+++++.++++++     |.+++.|.+++ .+
T Consensus        79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyI-----V~~ygaF~~~~~~i  153 (364)
T KOG0581|consen   79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYI-----VGFYGAFYSNGEEI  153 (364)
T ss_pred             HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCe-----eeEeEEEEeCCceE
Confidence            45777899999999999999999999999999994  456778899999999999988877     99999999999 59


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEeecCCcEEeccCCCCCcC--
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKVPSPR--  244 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~--  244 (264)
                      +|+|||| +|+|.+++...+  +++|..+..++.+|++||.|||+ .+||||||||+|||++..|.|||||||.+...  
T Consensus       154 sI~mEYMDgGSLd~~~k~~g--~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvn  231 (364)
T KOG0581|consen  154 SICMEYMDGGSLDDILKRVG--RIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVN  231 (364)
T ss_pred             EeehhhcCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhh
Confidence            9999999 999999999875  89999999999999999999995 89999999999999999999999999998763  


Q ss_pred             --CCCcccceeeeeceeEee
Q 024661          245 --HAFSFQTFLSMASRVYIC  262 (264)
Q Consensus       245 --~~~~~~~~~y~ape~~~~  262 (264)
                        .....||..|||||-+.+
T Consensus       232 S~a~tfvGT~~YMsPERi~g  251 (364)
T KOG0581|consen  232 SIANTFVGTSAYMSPERISG  251 (364)
T ss_pred             hhcccccccccccChhhhcC
Confidence              345579999999997754

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=3e-39  Score=254.25  Aligned_cols=164  Identities=24%  Similarity=0.388  Sum_probs=152.5

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++++.||.|+||.|.+++.+.+|..+|+|++++.+    +..+...+|..+|+.+.||.+     +.+++.|.+..+
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFl-----v~l~~t~~d~~~  118 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFL-----VKLYGTFKDNSN  118 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCcee-----EEEEEeeccCCe
Confidence            56999999999999999999999999999999998654    456778899999999999887     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      +||||||+ ||.|++++++..  +|++..++.|+.||+.||+|||+++|++||+||+|||+|.+|.+||+|||+|.....
T Consensus       119 lymvmeyv~GGElFS~Lrk~~--rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~  196 (355)
T KOG0616|consen  119 LYMVMEYVPGGELFSYLRKSG--RFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG  196 (355)
T ss_pred             EEEEEeccCCccHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence            99999999 999999999876  899999999999999999999999999999999999999999999999999988766


Q ss_pred             Cc---ccceeeeeceeEee
Q 024661          247 FS---FQTFLSMASRVYIC  262 (264)
Q Consensus       247 ~~---~~~~~y~ape~~~~  262 (264)
                      .+   |||+.|+|||++.+
T Consensus       197 rT~TlCGTPeYLAPEii~s  215 (355)
T KOG0616|consen  197 RTWTLCGTPEYLAPEIIQS  215 (355)
T ss_pred             cEEEecCCccccChHHhhc
Confidence            44   69999999998754

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=7.2e-39  Score=252.97  Aligned_cols=165  Identities=28%  Similarity=0.460  Sum_probs=149.6

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ++|+.+.++|+|+||.||+|+++.||+.||||.+...   ....+...+|+++|++++|+|+     |.++++|.....+
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NL-----VnLiEVFrrkrkl   76 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENL-----VNLIEVFRRKRKL   76 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchH-----HHHHHHHHhccee
Confidence            4688899999999999999999999999999998643   3556788999999999999998     9999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-C
Q 024661          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-F  247 (264)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-~  247 (264)
                      +||+|||..++.+.+.... .+++.+.+..|+.|++.|+.|+|+++++||||||+||||+.+|.+||||||+|+.... .
T Consensus        77 hLVFE~~dhTvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg  155 (396)
T KOG0593|consen   77 HLVFEYCDHTVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG  155 (396)
T ss_pred             EEEeeecchHHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCc
Confidence            9999999999888888876 5689999999999999999999999999999999999999999999999999998662 2


Q ss_pred             -----cccceeeeeceeEee
Q 024661          248 -----SFQTFLSMASRVYIC  262 (264)
Q Consensus       248 -----~~~~~~y~ape~~~~  262 (264)
                           ...|.+|.|||++.+
T Consensus       156 d~YTDYVATRWYRaPELLvG  175 (396)
T KOG0593|consen  156 DNYTDYVATRWYRAPELLVG  175 (396)
T ss_pred             chhhhhhhhhhccChhhhcc
Confidence                 246788999998865

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=4.1e-37  Score=265.14  Aligned_cols=189  Identities=37%  Similarity=0.685  Sum_probs=172.4

Q ss_pred             CCCCCCceEEeeCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHh-ccCCCCc
Q 024661           75 PDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA-RHDIGGT  153 (264)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~-~~~~~~~  153 (264)
                      ..+.++.+.+...+.+..+|.+.+.||+|+||.|-+|.+..|++.||||++++.+....+...|+.+|..++ |-+-...
T Consensus       169 ~~~~~~dY~~v~~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~  248 (586)
T KOG0667|consen  169 FDDEDGDYQLVVNDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKY  248 (586)
T ss_pred             CCCCCCceeEEecceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCe
Confidence            444566789999999999999999999999999999999999999999999999999999999999999999 5555667


Q ss_pred             ceEEEceeeeeCCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC--C
Q 024661          154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA--E  231 (264)
Q Consensus       154 ~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~--~  231 (264)
                      ++|+++++|...+++|||+|++..+|+++++.++-.+++...++.++.||+.||.+||+.||||+||||+|||+..-  .
T Consensus       249 n~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~  328 (586)
T KOG0667|consen  249 NIVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRS  328 (586)
T ss_pred             eEEEeeeccccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcC
Confidence            88999999999999999999999999999999887889999999999999999999999999999999999999864  4


Q ss_pred             cEEeccCCCCCcCCCCc---ccceeeeeceeEeec
Q 024661          232 YVKVPDYKVPSPRHAFS---FQTFLSMASRVYICI  263 (264)
Q Consensus       232 ~v~l~Dfg~a~~~~~~~---~~~~~y~ape~~~~~  263 (264)
                      .|||+|||.|+......   +++.+|-|||+++++
T Consensus       329 ~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGl  363 (586)
T KOG0667|consen  329 RIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGL  363 (586)
T ss_pred             ceeEEecccccccCCcceeeeeccccccchhhccC
Confidence            89999999998765543   477789999999875

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=6.7e-38  Score=243.26  Aligned_cols=165  Identities=27%  Similarity=0.400  Sum_probs=149.8

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh---hHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ++|...++||+|.||.||+|++..+|+.||||.++..+.   ......+|+..|+.++|+|+     +.+++.|.+.+.+
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nI-----i~LiD~F~~~~~l   76 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNI-----IELIDVFPHKSNL   76 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcch-----hhhhhhccCCCce
Confidence            478899999999999999999999999999999985432   35677899999999999998     9999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC--
Q 024661          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA--  246 (264)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~--  246 (264)
                      .||+||+..+|...++... ..++...+..|+.+++.||+|||++.|+||||||.|+||+++|.+||+|||+|+....  
T Consensus        77 ~lVfEfm~tdLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~  155 (318)
T KOG0659|consen   77 SLVFEFMPTDLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN  155 (318)
T ss_pred             EEEEEeccccHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence            9999999999999998765 5799999999999999999999999999999999999999999999999999987442  


Q ss_pred             ----CcccceeeeeceeEee
Q 024661          247 ----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ----~~~~~~~y~ape~~~~  262 (264)
                          ...-|.+|-|||+++|
T Consensus       156 ~~~~~~V~TRWYRAPELLfG  175 (318)
T KOG0659|consen  156 RIQTHQVVTRWYRAPELLFG  175 (318)
T ss_pred             cccccceeeeeccChHHhcc
Confidence                2246889999998875

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=1.4e-37  Score=262.10  Aligned_cols=146  Identities=23%  Similarity=0.411  Sum_probs=133.8

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh----hHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      -.++|+++.+||+|+||.||+|+.+.||+.+|+|++++...    ....+..|..+|....++.+     |+++..|++.
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~v-----VKLyYsFQD~  213 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWV-----VKLYYSFQDK  213 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcE-----EEEEEEecCC
Confidence            34679999999999999999999999999999999997653    34566778888877666665     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                      .++||||||+ ||++..+|....  .+++..+++|+.+++.|++.||+.|+|||||||+|+|||..|++||+|||+|.
T Consensus       214 ~~LYLiMEylPGGD~mTLL~~~~--~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~  289 (550)
T KOG0605|consen  214 EYLYLIMEYLPGGDMMTLLMRKD--TLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLST  289 (550)
T ss_pred             CeeEEEEEecCCccHHHHHHhcC--cCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccc
Confidence            9999999999 999999999876  89999999999999999999999999999999999999999999999999985

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.4e-37  Score=260.28  Aligned_cols=169  Identities=25%  Similarity=0.404  Sum_probs=150.0

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ....+.|+.+++||+|.||.||+|++..+|+.||+|.++..   .....-..+||.+|++|.|+||     +++.+...+
T Consensus       113 ~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNI-----ikL~eivt~  187 (560)
T KOG0600|consen  113 PRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNI-----IKLEEIVTS  187 (560)
T ss_pred             ccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcc-----cceeeEEEe
Confidence            34456799999999999999999999999999999998743   3445667899999999999999     999988877


Q ss_pred             C--CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          165 R--NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       165 ~--~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                      .  ..+|||+|||..+|.-++.... ..|++.++..|+.|++.||+|+|.+||+|||||.+|||||.+|.+||+|||+|+
T Consensus       188 ~~~~siYlVFeYMdhDL~GLl~~p~-vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr  266 (560)
T KOG0600|consen  188 KLSGSIYLVFEYMDHDLSGLLSSPG-VKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLAR  266 (560)
T ss_pred             cCCceEEEEEecccchhhhhhcCCC-cccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEecccccee
Confidence            6  7999999999999999988754 579999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCc-------ccceeeeeceeEee
Q 024661          243 PRHAFS-------FQTFLSMASRVYIC  262 (264)
Q Consensus       243 ~~~~~~-------~~~~~y~ape~~~~  262 (264)
                      ......       .-|.+|-+||+++|
T Consensus       267 ~y~~~~~~~~T~rVvTLWYRpPELLLG  293 (560)
T KOG0600|consen  267 FYTPSGSAPYTSRVVTLWYRPPELLLG  293 (560)
T ss_pred             eccCCCCcccccceEEeeccChHHhcC
Confidence            654433       35889999999876

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=9e-37  Score=257.37  Aligned_cols=164  Identities=24%  Similarity=0.336  Sum_probs=146.1

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeC
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~  165 (264)
                      ..+|.+++.||+|+|++|++|+++.++++||||++.+..    ...+-+.+|-++|.+| .||.+     ++++..|+|+
T Consensus        72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgi-----vkLy~TFQD~  146 (604)
T KOG0592|consen   72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGI-----VKLYFTFQDE  146 (604)
T ss_pred             hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCe-----EEEEEEeecc
Confidence            356999999999999999999999999999999987543    3345667899999999 45555     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      ..+|+|+||+ +|+|.++|.+.+  .|++..++.|+.||+.||+|||++|||||||||+|||++.+++++|+|||.|...
T Consensus       147 ~sLYFvLe~A~nGdll~~i~K~G--sfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l  224 (604)
T KOG0592|consen  147 ESLYFVLEYAPNGDLLDLIKKYG--SFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKIL  224 (604)
T ss_pred             cceEEEEEecCCCcHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccC
Confidence            9999999999 999999999886  8999999999999999999999999999999999999999999999999998752


Q ss_pred             C-------------------CCcccceeeeeceeEe
Q 024661          245 H-------------------AFSFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~-------------------~~~~~~~~y~ape~~~  261 (264)
                      .                   ....||..|.+||++.
T Consensus       225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~  260 (604)
T KOG0592|consen  225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLN  260 (604)
T ss_pred             ChhhccccCccCcccccCcccceeeeecccCHHHhc
Confidence            2                   2246899999999864

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-36  Score=257.85  Aligned_cols=167  Identities=30%  Similarity=0.414  Sum_probs=150.8

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech-----h-hhHHHHHHHHHHHHHHh-ccCCCCcceEEEcee
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-----N-KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNW  161 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~-~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~  161 (264)
                      ...++|.+++.||+|+||+|++|.+..+++.||+|++++.     . ...+.+.+|+.+++.+. |+|+     ++++++
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI-----~~l~ev   88 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNI-----IRLLEV   88 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCE-----eEEEEE
Confidence            4557899999999999999999999999999999977653     1 23566778999999999 8877     999999


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC-CcEEeccCC
Q 024661          162 FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA-EYVKVPDYK  239 (264)
Q Consensus       162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~-~~v~l~Dfg  239 (264)
                      +.....+|+||||+ ||+|++++.+..  ++.|..++.+++|++.|++|||++||+||||||+|||++.+ +++||+|||
T Consensus        89 ~~t~~~~~ivmEy~~gGdL~~~i~~~g--~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG  166 (370)
T KOG0583|consen   89 FATPTKIYIVMEYCSGGDLFDYIVNKG--RLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFG  166 (370)
T ss_pred             EecCCeEEEEEEecCCccHHHHHHHcC--CCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccc
Confidence            99999999999999 899999999954  89999999999999999999999999999999999999999 999999999


Q ss_pred             CCCcCC------CCcccceeeeeceeEee
Q 024661          240 VPSPRH------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       240 ~a~~~~------~~~~~~~~y~ape~~~~  262 (264)
                      ++....      ...+|++.|+|||++.+
T Consensus       167 ~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~  195 (370)
T KOG0583|consen  167 LSAISPGEDGLLKTFCGSPAYAAPEVLSG  195 (370)
T ss_pred             cccccCCCCCcccCCCCCcccCCHHHhCC
Confidence            998652      25579999999999865

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1e-38  Score=249.86  Aligned_cols=166  Identities=28%  Similarity=0.353  Sum_probs=146.2

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEe---chhhhHHHHHHHHHHHHHHhccCCCCcceEEEce-eeeeCC
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRN-WFDYRN  166 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~-~~~~~~  166 (264)
                      ...|+++++||+|+||.||++.+..+|..+|.|.++   .+.+.++....|+.+|++|+|+|+     |++++ .|..++
T Consensus        18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNI-----VqYy~~~f~~~~   92 (375)
T KOG0591|consen   18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNI-----VQYYAHSFIEDN   92 (375)
T ss_pred             HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchH-----HHHHHHhhhccc
Confidence            356999999999999999999999999999999886   234667888999999999999998     99988 455555


Q ss_pred             E-EEEEEecC-CCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHH--CC--CeecCCCCCCEEeecCCcEEeccC
Q 024661          167 H-ICIVFEKL-GPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMHE--LR--LIHTDLKPENILLVSAEYVKVPDY  238 (264)
Q Consensus       167 ~-~~lv~e~~-~~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~--ivH~dikp~Nili~~~~~v~l~Df  238 (264)
                      . ++||||+| +|+|...++.  .+...++|..+|.++.|++.||.++|.  ..  |.||||||.||+++.+|.|||+||
T Consensus        93 evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDf  172 (375)
T KOG0591|consen   93 EVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDF  172 (375)
T ss_pred             hhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccc
Confidence            5 99999999 9999999983  344679999999999999999999999  34  899999999999999999999999


Q ss_pred             CCCCcCCCC------cccceeeeeceeEe
Q 024661          239 KVPSPRHAF------SFQTFLSMASRVYI  261 (264)
Q Consensus       239 g~a~~~~~~------~~~~~~y~ape~~~  261 (264)
                      |+++.....      ..||++||+||.+.
T Consensus       173 GL~r~l~s~~tfA~S~VGTPyYMSPE~i~  201 (375)
T KOG0591|consen  173 GLGRFLSSKTTFAHSLVGTPYYMSPERIH  201 (375)
T ss_pred             hhHhHhcchhHHHHhhcCCCcccCHHHHh
Confidence            999876553      36999999999864

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.2e-36  Score=258.18  Aligned_cols=167  Identities=23%  Similarity=0.316  Sum_probs=146.7

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      .-.++|.++++||+|+||+|+++..+.+++.+|||++++..    ...+..+.|.+++....    .||.++.++.+|++
T Consensus       365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~----~HPFL~~L~~~fQT  440 (694)
T KOG0694|consen  365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELAN----RHPFLVNLFSCFQT  440 (694)
T ss_pred             ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhc----cCCeEeeccccccc
Confidence            34467999999999999999999999999999999998753    45678888999888876    33556999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      ++++|+||||+ ||++..+.+..   .|++..++.|+..|+.||.|||++|||+||||.+|||+|.+|++||+|||+++.
T Consensus       441 ~~~l~fvmey~~Ggdm~~~~~~~---~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe  517 (694)
T KOG0694|consen  441 KEHLFFVMEYVAGGDLMHHIHTD---VFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKE  517 (694)
T ss_pred             CCeEEEEEEecCCCcEEEEEecc---cccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccc
Confidence            99999999999 88855444433   699999999999999999999999999999999999999999999999999987


Q ss_pred             CC------CCcccceeeeeceeEee
Q 024661          244 RH------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       244 ~~------~~~~~~~~y~ape~~~~  262 (264)
                      ..      ...+||+.|||||++..
T Consensus       518 ~m~~g~~TsTfCGTpey~aPEil~e  542 (694)
T KOG0694|consen  518 GMGQGDRTSTFCGTPEFLAPEVLTE  542 (694)
T ss_pred             cCCCCCccccccCChhhcChhhhcc
Confidence            44      45589999999999754

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-35  Score=240.43  Aligned_cols=198  Identities=57%  Similarity=0.976  Sum_probs=179.2

Q ss_pred             CCCCCCCCCCCCCCCceEEeeCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHH
Q 024661           66 PRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL  145 (264)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l  145 (264)
                      ++...++..+++.++.+.+..++.+..+|.+.+.+|+|.||.|..+.+..++..||+|+++.-...++...-|+++++++
T Consensus        63 ~~~~~~~~~~dD~dGH~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki  142 (415)
T KOG0671|consen   63 ARLESRPGRPDDKDGHYVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKI  142 (415)
T ss_pred             ccccCCCCCCCCCCceEEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            56677788889999999999999999999999999999999999999999999999999998889999999999999999


Q ss_pred             hccC-CCCcceEEEceeeeeCCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 024661          146 ARHD-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPEN  224 (264)
Q Consensus       146 ~~~~-~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~N  224 (264)
                      .+.. -....++++.++|+..++.|||+|.+|-++++++..+...+++...++.|+.|+++++.|||+.+++|.||||+|
T Consensus       143 ~~~DP~g~~rcv~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPEN  222 (415)
T KOG0671|consen  143 NESDPNGKFRCVQMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPEN  222 (415)
T ss_pred             HhcCCCCceEEEeeehhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChhe
Confidence            7654 334567899999999999999999999999999999888899999999999999999999999999999999999


Q ss_pred             EEeecCC--------------------cEEeccCCCCCcCCCCc---ccceeeeeceeEeec
Q 024661          225 ILLVSAE--------------------YVKVPDYKVPSPRHAFS---FQTFLSMASRVYICI  263 (264)
Q Consensus       225 ili~~~~--------------------~v~l~Dfg~a~~~~~~~---~~~~~y~ape~~~~~  263 (264)
                      ||+.+..                    .|+|+|||.|+..+...   .+|..|-|||++++.
T Consensus       223 ILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgL  284 (415)
T KOG0671|consen  223 ILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGL  284 (415)
T ss_pred             EEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheecc
Confidence            9996421                    47999999998765544   689999999999874

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-37  Score=258.99  Aligned_cols=167  Identities=28%  Similarity=0.454  Sum_probs=148.3

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh--hHHHHHHHHHHHHHHh-ccCCCCcceEEEceeeeeC
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~~  165 (264)
                      .+-++|.++++||.|.||.||+|+.+.+++.||||.+++.-.  ..-.-.+|+..|+++. |+|+     +++.+++.+.
T Consensus         7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpni-----ikL~Evi~d~   81 (538)
T KOG0661|consen    7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNI-----IKLKEVIRDN   81 (538)
T ss_pred             hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcc-----hhhHHHhhcc
Confidence            345789999999999999999999999999999998875432  2223368999999999 8888     9999999887


Q ss_pred             C-EEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 N-HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~-~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      + .+|+|||||..+|+++++.+ ...|++..++.|+.||++||+|+|.+|+.|||+||+||||.....+||+|||+|+..
T Consensus        82 ~~~L~fVfE~Md~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev  160 (538)
T KOG0661|consen   82 DRILYFVFEFMDCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREV  160 (538)
T ss_pred             CceEeeeHHhhhhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccc
Confidence            7 99999999999999999987 478999999999999999999999999999999999999999999999999999975


Q ss_pred             CC-----CcccceeeeeceeEe
Q 024661          245 HA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~~-----~~~~~~~y~ape~~~  261 (264)
                      ..     ....|.+|.|||+++
T Consensus       161 ~SkpPYTeYVSTRWYRAPEvLL  182 (538)
T KOG0661|consen  161 RSKPPYTEYVSTRWYRAPEVLL  182 (538)
T ss_pred             ccCCCcchhhhcccccchHHhh
Confidence            54     225889999999863

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=5.3e-37  Score=259.89  Aligned_cols=164  Identities=26%  Similarity=0.424  Sum_probs=150.4

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ++|.+.+.||+|+||.||+|+.+.+.+.||+|.+.+.   ++....+.+|+++++.++|+|+     +.++++|+...++
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpni-----v~m~esfEt~~~~   76 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNI-----VEMLESFETSAHL   76 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcch-----hhHHHhhcccceE
Confidence            4688999999999999999999999999999999753   4556778899999999999999     9999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC--
Q 024661          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA--  246 (264)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~--  246 (264)
                      |+|+||+-|+|..++...+  .++|+.+..++.|++.||.|||+++|+|||+||.|||++.+|.+|+||||+|+.-..  
T Consensus        77 ~vVte~a~g~L~~il~~d~--~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t  154 (808)
T KOG0597|consen   77 WVVTEYAVGDLFTILEQDG--KLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT  154 (808)
T ss_pred             EEEehhhhhhHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCc
Confidence            9999999669999999876  899999999999999999999999999999999999999999999999999987443  


Q ss_pred             ----CcccceeeeeceeEee
Q 024661          247 ----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ----~~~~~~~y~ape~~~~  262 (264)
                          ...||+.|||||++..
T Consensus       155 ~vltsikGtPlYmAPElv~e  174 (808)
T KOG0597|consen  155 SVLTSIKGTPLYMAPELVEE  174 (808)
T ss_pred             eeeeeccCcccccCHHHHcC
Confidence                3359999999998764

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.2e-35  Score=240.49  Aligned_cols=166  Identities=23%  Similarity=0.293  Sum_probs=150.7

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      .+.|++.++||.|..+.||+|+...+++.||||+++.++  ...+.+.+|+..++.+.|||+     +.++..|..+..+
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNI-----v~~~~sFvv~~~L   99 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNI-----VTYHCSFVVDSEL   99 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCc-----ceEEEEEEeccee
Confidence            367999999999999999999999999999999998543  346789999999999999999     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC--
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH--  245 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~--  245 (264)
                      |+||.|| +|++.++++..-...++|..+..|+++++.||.|||.+|.||||||+.||||+.+|.|||+|||.+....  
T Consensus       100 WvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~  179 (516)
T KOG0582|consen  100 WVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS  179 (516)
T ss_pred             EEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence            9999999 9999999998766789999999999999999999999999999999999999999999999999764311  


Q ss_pred             --------CCcccceeeeeceeEe
Q 024661          246 --------AFSFQTFLSMASRVYI  261 (264)
Q Consensus       246 --------~~~~~~~~y~ape~~~  261 (264)
                              ....+|+.|||||+++
T Consensus       180 G~R~~~rf~tfvgtp~wmAPEvl~  203 (516)
T KOG0582|consen  180 GDRQVTRFNTFVGTPCWMAPEVLM  203 (516)
T ss_pred             CceeeEeeccccCcccccChHHhh
Confidence                    3446899999999853

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2e-36  Score=247.75  Aligned_cols=167  Identities=29%  Similarity=0.458  Sum_probs=152.9

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech----hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      .+..+|++.+.||.|.||+|-+|.+...|+.||||.+++.    ++..-.+.+|++++..|+||+|     ++++++|+.
T Consensus        50 nlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhI-----I~IyEVFEN  124 (668)
T KOG0611|consen   50 NLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHI-----IQIYEVFEN  124 (668)
T ss_pred             chhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCce-----eehhhhhcC
Confidence            5667899999999999999999999999999999999754    3445677899999999999998     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      .+.+.|||||. +|.|++|+...+  .+++.+++.+++||++|+.|+|.++++|||||.+|||+|.++++||+|||++..
T Consensus       125 kdKIvivMEYaS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNl  202 (668)
T KOG0611|consen  125 KDKIVIVMEYASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNL  202 (668)
T ss_pred             CceEEEEEEecCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhh
Confidence            99999999999 999999999876  899999999999999999999999999999999999999999999999999976


Q ss_pred             CCC-----CcccceeeeeceeEee
Q 024661          244 RHA-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       244 ~~~-----~~~~~~~y~ape~~~~  262 (264)
                      ...     ..||.+.|.+||++-+
T Consensus       203 y~~~kfLqTFCGSPLYASPEIvNG  226 (668)
T KOG0611|consen  203 YADKKFLQTFCGSPLYASPEIVNG  226 (668)
T ss_pred             hccccHHHHhcCCcccCCccccCC
Confidence            543     4578899999998643

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-35  Score=249.12  Aligned_cols=163  Identities=28%  Similarity=0.378  Sum_probs=143.6

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcE-EEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC-
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKEL-VAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN-  166 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~-vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~-  166 (264)
                      +...+.+.||+|+||+||+|.+.  |.. ||+|++....   ...+.+.+|+.+|.+++|+|+     +++++.+.+.. 
T Consensus        41 ~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNI-----V~f~G~~~~~~~  113 (362)
T KOG0192|consen   41 DELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNI-----VQFYGACTSPPG  113 (362)
T ss_pred             HHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCe-----eeEEEEEcCCCC
Confidence            34566677999999999999987  444 9999997533   226689999999999999998     99999999887 


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCCCCEEeecCC-cEEeccCCCCCc
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR-LIHTDLKPENILLVSAE-YVKVPDYKVPSP  243 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dikp~Nili~~~~-~v~l~Dfg~a~~  243 (264)
                      .+++||||+ +|+|.+++.......++...+..|+.||+.||+|||+++ |||||||++|||++.++ ++||+|||+++.
T Consensus       114 ~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~  193 (362)
T KOG0192|consen  114 SLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSRE  193 (362)
T ss_pred             ceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCcccee
Confidence            799999999 999999998843358999999999999999999999999 99999999999999997 999999999987


Q ss_pred             CCCC------cccceeeeeceeEe
Q 024661          244 RHAF------SFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~~------~~~~~~y~ape~~~  261 (264)
                      ....      ..||+.|||||+++
T Consensus       194 ~~~~~~~~~~~~GT~~wMAPEv~~  217 (362)
T KOG0192|consen  194 KVISKTSMTSVAGTYRWMAPEVLR  217 (362)
T ss_pred             eccccccccCCCCCccccChhhhc
Confidence            5542      46899999999987

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.7e-35  Score=239.53  Aligned_cols=164  Identities=31%  Similarity=0.406  Sum_probs=145.5

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC--EE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN--HI  168 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~--~~  168 (264)
                      .+|..++.||+|+||.||++.+..+|+.+|+|.+.... ...+.+.+|+.+|++++|++|     |++++......  .+
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~I-----V~~~G~~~~~~~~~~   91 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNI-----VQYYGSSSSRENDEY   91 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCE-----EeeCCccccccCeee
Confidence            45888999999999999999999999999999887542 225678999999999998887     99999855544  79


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec-CCcEEeccCCCCCcCCC
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS-AEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~-~~~v~l~Dfg~a~~~~~  246 (264)
                      +++|||+ +|+|.+++...++ .+++..++.+.+||++||.|||++||||+||||+|||++. ++.+||+|||++.....
T Consensus        92 ~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~  170 (313)
T KOG0198|consen   92 NIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLES  170 (313)
T ss_pred             EeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence            9999999 9999999998875 7999999999999999999999999999999999999999 79999999999886542


Q ss_pred             ---------CcccceeeeeceeEe
Q 024661          247 ---------FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ---------~~~~~~~y~ape~~~  261 (264)
                               ...||+.|||||++.
T Consensus       171 ~~~~~~~~~~~~Gtp~~maPEvi~  194 (313)
T KOG0198|consen  171 KGTKSDSELSVQGTPNYMAPEVIR  194 (313)
T ss_pred             ccccccccccccCCccccCchhhc
Confidence                     235899999999987

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.8e-35  Score=236.46  Aligned_cols=166  Identities=23%  Similarity=0.367  Sum_probs=147.0

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee--CC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--RN  166 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~--~~  166 (264)
                      +.|+.+..|++|+||.||+|+++.+++.||+|.++.++   ...-...+||.+|.+++|+||     |.+..+...  -+
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NI-----V~vkEVVvG~~~d  150 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNI-----VEVKEVVVGSNMD  150 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCe-----eeeEEEEeccccc
Confidence            56999999999999999999999999999999997432   233456889999999999998     888887765  46


Q ss_pred             EEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          167 HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       167 ~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      .+|||||||..+|..++...+ ++|.+.++..++.|++.|++|||.+.|+|||||++|+|+...|-+||+|||+|+....
T Consensus       151 ~iy~VMe~~EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygs  229 (419)
T KOG0663|consen  151 KIYIVMEYVEHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGS  229 (419)
T ss_pred             eeeeeHHHHHhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcC
Confidence            799999999999999999876 7899999999999999999999999999999999999999999999999999987443


Q ss_pred             C------cccceeeeeceeEeec
Q 024661          247 F------SFQTFLSMASRVYICI  263 (264)
Q Consensus       247 ~------~~~~~~y~ape~~~~~  263 (264)
                      -      -.-|.+|-|||+++|-
T Consensus       230 p~k~~T~lVVTLWYRaPELLLG~  252 (419)
T KOG0663|consen  230 PLKPYTPLVVTLWYRAPELLLGA  252 (419)
T ss_pred             CcccCcceEEEeeecCHHHhcCC
Confidence            2      2368899999998863

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-34  Score=240.89  Aligned_cols=167  Identities=23%  Similarity=0.330  Sum_probs=142.4

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---------------hhHHHHHHHHHHHHHHhccCCCCc
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------------KYREAAMIEIDVLQRLARHDIGGT  153 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------------~~~~~~~~e~~~l~~l~~~~~~~~  153 (264)
                      ...+.|++.+.||+|.||+|.+|++..+++.||||++.+.+               ...+...+|+.+++++.|+|+   
T Consensus        94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nV---  170 (576)
T KOG0585|consen   94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNV---  170 (576)
T ss_pred             eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCe---
Confidence            34467999999999999999999999999999999997532               223678899999999999998   


Q ss_pred             ceEEEceeeee--CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC
Q 024661          154 RCVQIRNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA  230 (264)
Q Consensus       154 ~~~~~~~~~~~--~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~  230 (264)
                        |+++++..+  .+.+|||+||| .|.+...-....  .+++.+++.|+++++.||+|||.+|||||||||+|+|++++
T Consensus       171 --V~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~--els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~  246 (576)
T KOG0585|consen  171 --VKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKP--ELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSD  246 (576)
T ss_pred             --eEEEEeecCcccCceEEEEEeccCCccccCCCCcc--cccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCC
Confidence              999999988  57899999999 776654322221  38999999999999999999999999999999999999999


Q ss_pred             CcEEeccCCCCCcCC-----------CCcccceeeeeceeEee
Q 024661          231 EYVKVPDYKVPSPRH-----------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       231 ~~v~l~Dfg~a~~~~-----------~~~~~~~~y~ape~~~~  262 (264)
                      |+|||+|||.+....           ....||+.+||||++..
T Consensus       247 g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~  289 (576)
T KOG0585|consen  247 GTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSG  289 (576)
T ss_pred             CcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcC
Confidence            999999999987431           13468999999998753

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=7.5e-35  Score=235.58  Aligned_cols=166  Identities=29%  Similarity=0.480  Sum_probs=146.7

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh---hHHHHHHHHHHHHHHhccC-CCCcceEEEceeeeeCC-
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHD-IGGTRCVQIRNWFDYRN-  166 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~~~-~~~~~~~~~~~~~~~~~-  166 (264)
                      ..|..+++||+|.||+||+|+.+.+|+.||+|.++....   ......+|+.+++.++|+| +     +.+++++.+.+ 
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~i-----v~L~dv~~~~~~   85 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHI-----VRLHDVIHTSNN   85 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcce-----EEEEeeeeeccc
Confidence            457888999999999999999999999999999985433   4566789999999999998 6     99999998877 


Q ss_pred             -----EEEEEEecCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          167 -----HICIVFEKLGPSLYDFLRKNSY--RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       167 -----~~~lv~e~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                           .+++|+||+.-+|..++.....  ..++...++.++.||+.||+|||+++|+||||||.||||+++|.+||+|||
T Consensus        86 ~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFG  165 (323)
T KOG0594|consen   86 HRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFG  165 (323)
T ss_pred             ccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccc
Confidence                 8999999999999999997653  367788999999999999999999999999999999999999999999999


Q ss_pred             CCCcCC------CCcccceeeeeceeEee
Q 024661          240 VPSPRH------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       240 ~a~~~~------~~~~~~~~y~ape~~~~  262 (264)
                      +|+...      .....|..|.|||++.+
T Consensus       166 lAra~~ip~~~yt~evvTlWYRaPEvLlG  194 (323)
T KOG0594|consen  166 LARAFSIPMRTYTPEVVTLWYRAPEVLLG  194 (323)
T ss_pred             hHHHhcCCcccccccEEEeeccCHHHhcC
Confidence            998543      12347889999999765

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=6.3e-36  Score=229.08  Aligned_cols=167  Identities=23%  Similarity=0.340  Sum_probs=152.6

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      .++|++++.||+|.||.||+|+.+.++-.||+|++.+..    ....++.+|+++-..|.|+||     .+++++|.+..
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpni-----lrlY~~fhd~~   95 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNI-----LRLYGYFHDSK   95 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccH-----Hhhhhheeccc
Confidence            367999999999999999999999999999999998643    445788899999999999988     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      .+||++||. +|+|+..|.......+++.....|+.|++.||.|+|.++|+||||||+|+|++.++.+||+|||.+....
T Consensus        96 riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p  175 (281)
T KOG0580|consen   96 RIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP  175 (281)
T ss_pred             eeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence            999999999 9999999997766789999999999999999999999999999999999999999999999999997653


Q ss_pred             ----CCcccceeeeeceeEee
Q 024661          246 ----AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ----~~~~~~~~y~ape~~~~  262 (264)
                          ..-+||..|.+||...+
T Consensus       176 ~~kR~tlcgt~dyl~pEmv~~  196 (281)
T KOG0580|consen  176 SNKRKTLCGTLDYLPPEMVEG  196 (281)
T ss_pred             CCCceeeecccccCCHhhcCC
Confidence                24479999999998754

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=3e-34  Score=245.80  Aligned_cols=145  Identities=23%  Similarity=0.367  Sum_probs=132.8

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++.+.||+|+||+||+|.+..+++.+|+|++.+..    .....+.+|+.+++.++|+++     +++++.+.+...
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~i-----v~~~~~~~~~~~   75 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWV-----VKMFYSFQDKLN   75 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCc-----ceEEEEEecCCe
Confidence            36999999999999999999999999999999997532    334567789999999998887     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      +|+||||+ +++|.+++....  .+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~  150 (363)
T cd05628          76 LYLIMEFLPGGDMMTLLMKKD--TLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTG  150 (363)
T ss_pred             EEEEEcCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccc
Confidence            99999999 999999998765  799999999999999999999999999999999999999999999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.4e-34  Score=244.25  Aligned_cols=144  Identities=24%  Similarity=0.380  Sum_probs=132.0

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++.+..    ...+.+.+|+++++.+.|+++     +++++++.+.++
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i-----v~~~~~~~~~~~   75 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWV-----VSLYYSFQDAQY   75 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEEcCCe
Confidence            36999999999999999999999999999999987532    234567889999999998887     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                      +|+||||+ +++|.+++....  .+++..++.++.|++.||+|||++||+||||||+|||++.++.++|+|||+++
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~  149 (377)
T cd05629          76 LYLIMEFLPGGDLMTMLIKYD--TFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLST  149 (377)
T ss_pred             eEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccc
Confidence            99999999 999999998765  78999999999999999999999999999999999999999999999999985

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=1.5e-33  Score=242.96  Aligned_cols=143  Identities=23%  Similarity=0.397  Sum_probs=131.7

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      .|++++.||+|+||.||+|.+..+++.||+|++.+..    .....+.+|+.+++.++|+++     +++++.+.+.+.+
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~i-----v~l~~~~~~~~~~   76 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWV-----VKLYYSFQDKDNL   76 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCe-----eeeEEEEecCCEE
Confidence            5899999999999999999999999999999997532    334567889999999998887     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                      |+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+++++|+|||++.
T Consensus        77 ~lv~E~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~  149 (381)
T cd05626          77 YFVMDYIPGGDMMSLLIRME--VFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCT  149 (381)
T ss_pred             EEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCc
Confidence            9999999 999999998765  78999999999999999999999999999999999999999999999999875

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1e-33  Score=242.63  Aligned_cols=145  Identities=23%  Similarity=0.378  Sum_probs=132.9

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++.+.||.|+||.||+|++..+++.||+|++.+..    .....+.+|+.+++.++|+++     +++++.+.+.+.
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~i-----v~~~~~~~~~~~   75 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWV-----VKLYYSFQDENY   75 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCC-----cceEEEEEcCCe
Confidence            36999999999999999999999999999999997532    334567789999999998888     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      +|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++..
T Consensus        76 ~~lv~E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~  150 (364)
T cd05599          76 LYLIMEYLPGGDMMTLLMKKD--TFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTG  150 (364)
T ss_pred             EEEEECCCCCcHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeeccccee
Confidence            99999999 999999998765  699999999999999999999999999999999999999999999999999864

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=1.5e-33  Score=243.03  Aligned_cols=143  Identities=25%  Similarity=0.418  Sum_probs=131.8

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      +|+++++||+|+||.||+|.+..+++.+|+|++.+..    .....+.+|+.+++.+.|+++     +++++.+.+.+.+
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~i-----v~~~~~~~~~~~~   76 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWV-----VRLYYSFQDKDNL   76 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcC-----CeEEEEEEeCCEE
Confidence            5899999999999999999999999999999997542    334577889999999999888     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                      |+||||+ +|+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|.
T Consensus        77 ~lv~E~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~  149 (382)
T cd05625          77 YFVMDYIPGGDMMSLLIRMG--IFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT  149 (382)
T ss_pred             EEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCc
Confidence            9999999 899999998764  68999999999999999999999999999999999999999999999999975

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=1.1e-33  Score=239.27  Aligned_cols=164  Identities=27%  Similarity=0.370  Sum_probs=147.3

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++.+.||+|+||.||+|++..+++.+|+|++.+..    ...+.+.+|+.+++.+.|+|+     +++++.+.+++.
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~~~~   92 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFI-----VNMMCSFQDENR   92 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCC-----CcEEEEEEcCCE
Confidence            67999999999999999999999999999999997543    234567889999999999988     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      +|+||||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        93 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~  170 (329)
T PTZ00263         93 VYFLLEFVVGGELFTHLRKAG--RFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD  170 (329)
T ss_pred             EEEEEcCCCCChHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence            99999999 999999998765  789999999999999999999999999999999999999999999999999976543


Q ss_pred             ---CcccceeeeeceeEee
Q 024661          247 ---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~~  262 (264)
                         ...++..|||||++.+
T Consensus       171 ~~~~~~gt~~y~aPE~~~~  189 (329)
T PTZ00263        171 RTFTLCGTPEYLAPEVIQS  189 (329)
T ss_pred             CcceecCChhhcCHHHHcC
Confidence               2357889999998754

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2e-34  Score=248.21  Aligned_cols=165  Identities=24%  Similarity=0.404  Sum_probs=152.6

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech----hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      +-|++++.||.|+-|.|.+|++..||+..|||++.+.    ......+.+|+-+|+-+.|||+     +++++.|++..+
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnV-----l~LydVwe~~~~   86 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNV-----LRLYDVWENKQH   86 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCe-----eeeeeeeccCce
Confidence            4599999999999999999999999999999999765    2345677889999999999998     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC-
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH-  245 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~-  245 (264)
                      +|+|+||+ +|.|++++...+  ++++.++..++.||+.|+.|+|..+|+|||+||+|+|++..+++||+|||+|..-. 
T Consensus        87 lylvlEyv~gGELFdylv~kG--~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~  164 (786)
T KOG0588|consen   87 LYLVLEYVPGGELFDYLVRKG--PLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVP  164 (786)
T ss_pred             EEEEEEecCCchhHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccC
Confidence            99999999 999999999876  89999999999999999999999999999999999999999999999999998633 


Q ss_pred             ----CCcccceeeeeceeEeec
Q 024661          246 ----AFSFQTFLSMASRVYICI  263 (264)
Q Consensus       246 ----~~~~~~~~y~ape~~~~~  263 (264)
                          ...||.+.|.+||+++|.
T Consensus       165 gklLeTSCGSPHYA~PEIV~G~  186 (786)
T KOG0588|consen  165 GKLLETSCGSPHYAAPEIVSGR  186 (786)
T ss_pred             CccccccCCCcccCCchhhcCC
Confidence                467899999999999873

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=1.7e-33  Score=242.27  Aligned_cols=144  Identities=23%  Similarity=0.394  Sum_probs=132.1

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++++.||+|+||.||+|++..+++.||+|++.+..    .....+.+|+++++.+.|+++     +++++.+.+++.
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~i-----v~~~~~~~~~~~   75 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWV-----VKLYYSFQDKDN   75 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCc-----ceEEEEEEcCCE
Confidence            36999999999999999999999999999999987532    234567889999999999888     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                      +|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||+|.
T Consensus        76 ~~lv~E~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~  149 (376)
T cd05598          76 LYFVMDYIPGGDMMSLLIRLG--IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT  149 (376)
T ss_pred             EEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCc
Confidence            99999999 999999998765  68999999999999999999999999999999999999999999999999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=3.4e-32  Score=240.33  Aligned_cols=170  Identities=35%  Similarity=0.587  Sum_probs=145.9

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCC-CcceEEEceeeeeC-CEE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG-GTRCVQIRNWFDYR-NHI  168 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~-~~~~~~~~~~~~~~-~~~  168 (264)
                      .++|++.++||+|+||+||+|.+..+++.||||+++...........|+.+++.+.|.+.. +.+++.++++|..+ .++
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~  207 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM  207 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence            5789999999999999999999999999999999976555556677899999999887743 34578888888764 689


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEeecCC----------------
Q 024661          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAE----------------  231 (264)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~Nili~~~~----------------  231 (264)
                      |+|||+++++|.+++....  .+++..+..++.||+.||+|||+ .||+||||||+|||++.++                
T Consensus       208 ~iv~~~~g~~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~  285 (467)
T PTZ00284        208 CIVMPKYGPCLLDWIMKHG--PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPC  285 (467)
T ss_pred             EEEEeccCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCc
Confidence            9999999999999998764  79999999999999999999997 5999999999999998765                


Q ss_pred             cEEeccCCCCCcCC---CCcccceeeeeceeEee
Q 024661          232 YVKVPDYKVPSPRH---AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       232 ~v~l~Dfg~a~~~~---~~~~~~~~y~ape~~~~  262 (264)
                      .+||+|||.+....   ....+|..|||||++.+
T Consensus       286 ~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~  319 (467)
T PTZ00284        286 RVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLG  319 (467)
T ss_pred             eEEECCCCccccCccccccccCCccccCcHHhhc
Confidence            49999999886532   23468899999998765

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-34  Score=244.61  Aligned_cols=164  Identities=27%  Similarity=0.366  Sum_probs=148.7

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhh-HHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY-REAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      .-...|....+||+|..|.||.|....+++.||||.+....+. .+-+.+|+.+|+..+|+|+     |.+++.|-.++.
T Consensus       270 dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~Ni-----Vnfl~Sylv~de  344 (550)
T KOG0578|consen  270 DPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNI-----VNFLDSYLVGDE  344 (550)
T ss_pred             ChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHH-----HHHHHHhcccce
Confidence            3346699999999999999999999999999999999865543 4667899999999999998     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      +|+||||+ ||+|.+.+...   .++|.++..|+++++.||+|||.+||+|||||.+|||++.+|.+||+|||+|.....
T Consensus       345 LWVVMEym~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~  421 (550)
T KOG0578|consen  345 LWVVMEYMEGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISE  421 (550)
T ss_pred             eEEEEeecCCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeecccc
Confidence            99999999 99999999875   499999999999999999999999999999999999999999999999999986543


Q ss_pred             ------CcccceeeeeceeE
Q 024661          247 ------FSFQTFLSMASRVY  260 (264)
Q Consensus       247 ------~~~~~~~y~ape~~  260 (264)
                            .-.||++|||||++
T Consensus       422 ~~~KR~TmVGTPYWMAPEVv  441 (550)
T KOG0578|consen  422 EQSKRSTMVGTPYWMAPEVV  441 (550)
T ss_pred             ccCccccccCCCCccchhhh
Confidence                  33699999999985

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=6.7e-33  Score=236.63  Aligned_cols=158  Identities=25%  Similarity=0.424  Sum_probs=138.7

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      ++|++.++||+|+||.||+|.+..+++.||+|++...  ......+.+|+++++.++|+|+     +++++++.+.+.+|
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~  148 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNV-----VKCHDMFDHNGEIQ  148 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCc-----ceeeeEeccCCeEE
Confidence            4588899999999999999999999999999998643  3445678899999999999888     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC--
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA--  246 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~--  246 (264)
                      +||||+ +++|.+.      ...++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....  
T Consensus       149 lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~  222 (353)
T PLN00034        149 VLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM  222 (353)
T ss_pred             EEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccc
Confidence            999999 8887642      2466788899999999999999999999999999999999999999999999875432  


Q ss_pred             ----CcccceeeeeceeE
Q 024661          247 ----FSFQTFLSMASRVY  260 (264)
Q Consensus       247 ----~~~~~~~y~ape~~  260 (264)
                          ...++..|+|||++
T Consensus       223 ~~~~~~~gt~~y~aPE~~  240 (353)
T PLN00034        223 DPCNSSVGTIAYMSPERI  240 (353)
T ss_pred             ccccccccCccccCcccc
Confidence                33588899999986

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=3.8e-33  Score=238.74  Aligned_cols=145  Identities=23%  Similarity=0.382  Sum_probs=132.1

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      +.|++.+.||+|+||.||+|.+..+++.+|+|+++...    .....+.+|+.++..+.|+++     +++++.+.+.+.
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----v~~~~~~~~~~~   75 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWV-----VKMFYSFQDKRN   75 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCE-----eeEEEEEEcCCE
Confidence            36899999999999999999999999999999997532    334567789999999988877     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      +|+||||+ +++|.+++.+..  .+++..+..++.|++.||+|||++||+||||||+|||++.++.++|+|||++..
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~  150 (360)
T cd05627          76 LYLIMEFLPGGDMMTLLMKKD--TLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTG  150 (360)
T ss_pred             EEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcc
Confidence            99999999 999999998765  799999999999999999999999999999999999999999999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=2.4e-33  Score=240.54  Aligned_cols=165  Identities=19%  Similarity=0.287  Sum_probs=145.9

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ...++|++.+.||+|+||.||+|.+..+++.+|+|++.+..    .....+.+|+.+++.+.|+++     +++++.+.+
T Consensus        40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~i-----v~~~~~~~~  114 (370)
T cd05621          40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV-----VQLFCAFQD  114 (370)
T ss_pred             CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCE-----eeEEEEEEc
Confidence            34477999999999999999999999999999999987532    234557789999999999887     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      ++.+|+||||+ +++|.+++...   .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+|..
T Consensus       115 ~~~~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~  191 (370)
T cd05621         115 DKYLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMK  191 (370)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEeccccee
Confidence            99999999999 99999999764   489999999999999999999999999999999999999999999999999975


Q ss_pred             CCC-------CcccceeeeeceeEe
Q 024661          244 RHA-------FSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~-------~~~~~~~y~ape~~~  261 (264)
                      ...       ...+|..|||||++.
T Consensus       192 ~~~~~~~~~~~~~gt~~Y~aPE~~~  216 (370)
T cd05621         192 MDETGMVRCDTAVGTPDYISPEVLK  216 (370)
T ss_pred             cccCCceecccCCCCcccCCHHHHh
Confidence            432       335889999999864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-33  Score=234.28  Aligned_cols=164  Identities=21%  Similarity=0.296  Sum_probs=146.1

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++.+.||+|+||.||+|.+..+++.+|+|++....    ...+.+.+|+.+++.+.|+|+     +++++.+.+.+.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~~~~   75 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFI-----IRLFWTEHDQRF   75 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcH-----hhhHhhhccCCe
Confidence            36999999999999999999999999999999987432    234567889999999999888     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      +|+||||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~  153 (291)
T cd05612          76 LYMLMEYVPGGELFSYLRNSG--RFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD  153 (291)
T ss_pred             EEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence            99999999 899999998765  789999999999999999999999999999999999999999999999999876443


Q ss_pred             ---CcccceeeeeceeEee
Q 024661          247 ---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~~  262 (264)
                         ...++..|+|||++.+
T Consensus       154 ~~~~~~gt~~y~aPE~~~~  172 (291)
T cd05612         154 RTWTLCGTPEYLAPEVIQS  172 (291)
T ss_pred             CcccccCChhhcCHHHHcC
Confidence               2357889999998653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-33  Score=236.97  Aligned_cols=168  Identities=29%  Similarity=0.461  Sum_probs=151.2

Q ss_pred             eCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh----hHHHHHHHHHHHHHHh-ccCCCCcceEEEce
Q 024661           86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLA-RHDIGGTRCVQIRN  160 (264)
Q Consensus        86 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~  160 (264)
                      ....+...|.+.+.||+|.||.||+|+.+.+|+.+|+|++.+...    ..+.+.+|+.+|+++. |+|+     +.+++
T Consensus        29 ~~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpni-----v~l~~  103 (382)
T KOG0032|consen   29 FSEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNI-----VQLKD  103 (382)
T ss_pred             ccccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCE-----EEEEE
Confidence            345667789999999999999999999999999999999986443    3468899999999999 8877     99999


Q ss_pred             eeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC----CcEEe
Q 024661          161 WFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA----EYVKV  235 (264)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~----~~v~l  235 (264)
                      .|++...+++|||++ ||.|++.+...   .+++..+..++.|++.++.|||+.||+||||||+|+|+...    +.+++
T Consensus       104 ~~e~~~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~  180 (382)
T KOG0032|consen  104 AFEDPDSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKL  180 (382)
T ss_pred             EEEcCCeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEE
Confidence            999999999999999 99999999886   39999999999999999999999999999999999999854    47999


Q ss_pred             ccCCCCCcCCC-----CcccceeeeeceeEe
Q 024661          236 PDYKVPSPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       236 ~Dfg~a~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      +|||+|.....     ..+||+.|+|||++.
T Consensus       181 ~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~  211 (382)
T KOG0032|consen  181 IDFGLAKFIKPGERLHTIVGTPEYVAPEVLG  211 (382)
T ss_pred             eeCCCceEccCCceEeeecCCccccCchhhc
Confidence            99999987665     336999999999876

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.6e-33  Score=235.29  Aligned_cols=164  Identities=24%  Similarity=0.343  Sum_probs=146.8

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++++..    .....+.+|+++++.+.|+++     +++++.+.+.+.
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----v~~~~~~~~~~~   75 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWL-----VKLLYAFQDDEY   75 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCC-----ccEEEEEEcCCE
Confidence            36999999999999999999999999999999998542    234567889999999998888     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      .|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~  153 (333)
T cd05600          76 LYLAMEYVPGGDFRTLLNNLG--VLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT  153 (333)
T ss_pred             EEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence            99999999 999999998765  789999999999999999999999999999999999999999999999999976433


Q ss_pred             ---CcccceeeeeceeEee
Q 024661          247 ---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~~  262 (264)
                         ...++..|+|||++.+
T Consensus       154 ~~~~~~gt~~y~aPE~~~~  172 (333)
T cd05600         154 YANSVVGSPDYMAPEVLRG  172 (333)
T ss_pred             ccCCcccCccccChhHhcC
Confidence               3458899999998653

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.6e-34  Score=223.76  Aligned_cols=167  Identities=26%  Similarity=0.449  Sum_probs=149.6

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---------hhhHHHHHHHHHHHHHHhccCCCCcceEEEce
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---------NKYREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---------~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~  160 (264)
                      +-.+|.-.+.||+|..+.|.++.++.+|..+|+|++...         ....+....|+.+|+++..+    ++++.+.+
T Consensus        15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GH----P~II~l~D   90 (411)
T KOG0599|consen   15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGH----PYIIDLQD   90 (411)
T ss_pred             HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCC----CcEEEeee
Confidence            345688889999999999999999999999999998621         23456677899999998643    45599999


Q ss_pred             eeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          161 WFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                      +|+.+.++|+|+|.| .|.|+|++.+..  .++++..+.|++|+++|++|||.++||||||||+|||++++.+++|+|||
T Consensus        91 ~yes~sF~FlVFdl~prGELFDyLts~V--tlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFG  168 (411)
T KOG0599|consen   91 VYESDAFVFLVFDLMPRGELFDYLTSKV--TLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFG  168 (411)
T ss_pred             eccCcchhhhhhhhcccchHHHHhhhhe--eecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccc
Confidence            999999999999999 999999999876  89999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCCC-----cccceeeeeceeEee
Q 024661          240 VPSPRHAF-----SFQTFLSMASRVYIC  262 (264)
Q Consensus       240 ~a~~~~~~-----~~~~~~y~ape~~~~  262 (264)
                      +|+...+.     -|||+.|+|||.+.|
T Consensus       169 Fa~~l~~GekLrelCGTPgYLAPEtikC  196 (411)
T KOG0599|consen  169 FACQLEPGEKLRELCGTPGYLAPETIKC  196 (411)
T ss_pred             eeeccCCchhHHHhcCCCcccChhheee
Confidence            99987653     489999999999988

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-34  Score=246.40  Aligned_cols=167  Identities=24%  Similarity=0.320  Sum_probs=149.8

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEec----hhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ..|.-++.||.|+||.||.|++..+.+.||||...-    ....=+++..|+.+|+++.|||.     +.+.++|-.+..
T Consensus        26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPnt-----ieYkgCyLre~T  100 (948)
T KOG0577|consen   26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNT-----IEYKGCYLREHT  100 (948)
T ss_pred             HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCc-----ccccceeeccch
Confidence            348889999999999999999999999999998751    12233578899999999999998     999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC--
Q 024661          168 ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH--  245 (264)
Q Consensus       168 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~--  245 (264)
                      .|||||||-|+-.|++.-.+ .++.+..+..|+.+.+.||.|||+.+.||||||..|||+.+.|.|||+|||.|....  
T Consensus       101 aWLVMEYClGSAsDlleVhk-KplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA  179 (948)
T KOG0577|consen  101 AWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA  179 (948)
T ss_pred             HHHHHHHHhccHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCch
Confidence            99999999888888887665 479999999999999999999999999999999999999999999999999998754  


Q ss_pred             CCcccceeeeeceeEeecC
Q 024661          246 AFSFQTFLSMASRVYICIN  264 (264)
Q Consensus       246 ~~~~~~~~y~ape~~~~~~  264 (264)
                      ....||++|||||+++.||
T Consensus       180 nsFvGTPywMAPEVILAMD  198 (948)
T KOG0577|consen  180 NSFVGTPYWMAPEVILAMD  198 (948)
T ss_pred             hcccCCccccchhHheecc
Confidence            4667999999999999886

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-33  Score=238.03  Aligned_cols=174  Identities=22%  Similarity=0.305  Sum_probs=149.6

Q ss_pred             eEEeeCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhh-HHHHHHHHHHHHHHhccCCCCcceEEEce
Q 024661           82 YVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY-REAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (264)
Q Consensus        82 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~~~~~~~~~~~~~~~  160 (264)
                      +.+......++.|.-...||+|+||.||+|....+ ..||||.+...... ..+|.+|++++.+++|+|+     +++++
T Consensus        65 fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nl-----v~LlG  138 (361)
T KOG1187|consen   65 FSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNL-----VKLLG  138 (361)
T ss_pred             eeHHHHHHHHhCCchhcceecCCCeEEEEEEECCC-CEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCc-----ccEEE
Confidence            34444456668899999999999999999986544 88999988765443 5569999999999999998     99999


Q ss_pred             eeeeCC-EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCCCCEEeecCCcEEe
Q 024661          161 WFDYRN-HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL---RLIHTDLKPENILLVSAEYVKV  235 (264)
Q Consensus       161 ~~~~~~-~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp~Nili~~~~~v~l  235 (264)
                      +|.+.+ ..+||+||+ +|+|.+.+.......++|.....|+.+++.||+|||..   .|+|||||++|||+|++.++||
T Consensus       139 yC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKl  218 (361)
T KOG1187|consen  139 YCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKL  218 (361)
T ss_pred             EEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEc
Confidence            999988 599999999 99999999876532789999999999999999999975   3999999999999999999999


Q ss_pred             ccCCCCCcCCC-Cc------ccceeeeeceeEe
Q 024661          236 PDYKVPSPRHA-FS------FQTFLSMASRVYI  261 (264)
Q Consensus       236 ~Dfg~a~~~~~-~~------~~~~~y~ape~~~  261 (264)
                      +|||+|+.... ..      .||..|++||++.
T Consensus       219 sDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~  251 (361)
T KOG1187|consen  219 SDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYAS  251 (361)
T ss_pred             cCccCcccCCccccceeeecCCCCccCChhhhc
Confidence            99999976543 22      6888999999875

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=6.1e-33  Score=232.06  Aligned_cols=165  Identities=24%  Similarity=0.420  Sum_probs=144.8

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      .++|++.+.||+|+||.||+|.+..+++.+|+|+++...  .......+|+.+++.+.|+|+     +++++++.+....
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~~   78 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANI-----VLLHDIIHTKETL   78 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCc-----CeEEEEEecCCeE
Confidence            367999999999999999999999999999999987432  223456789999999999988     9999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC---
Q 024661          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH---  245 (264)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~---  245 (264)
                      |+||||++++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++....   
T Consensus        79 ~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~  157 (303)
T cd07869          79 TLVFEYVHTDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS  157 (303)
T ss_pred             EEEEECCCcCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC
Confidence            9999999889999887653 468999999999999999999999999999999999999999999999999986432   


Q ss_pred             ---CCcccceeeeeceeEe
Q 024661          246 ---AFSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ---~~~~~~~~y~ape~~~  261 (264)
                         ....++..|||||++.
T Consensus       158 ~~~~~~~~~~~y~aPE~~~  176 (303)
T cd07869         158 HTYSNEVVTLWYRPPDVLL  176 (303)
T ss_pred             ccCCCCcccCCCCChHHHc
Confidence               2235678899999864

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=1.4e-32  Score=232.59  Aligned_cols=165  Identities=22%  Similarity=0.321  Sum_probs=145.9

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh----hHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|.+.+.||+|+||.||+|.+..+++.+|+|++++...    ....+.+|+.+++.+.|+++     +.+++.+.+.+.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i-----~~~~~~~~~~~~   75 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWI-----PQLQYAFQDKDN   75 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCC-----cceeeEEecCCe
Confidence            369999999999999999999999999999999985432    44567889999999888887     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      .|+||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~  154 (330)
T cd05601          76 LYLVMEYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTA  154 (330)
T ss_pred             EEEEECCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence            99999999 999999998763 3699999999999999999999999999999999999999999999999999975432


Q ss_pred             -------CcccceeeeeceeEee
Q 024661          247 -------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 -------~~~~~~~y~ape~~~~  262 (264)
                             ...+|..|+|||++.+
T Consensus       155 ~~~~~~~~~~gt~~y~aPE~~~~  177 (330)
T cd05601         155 NKMVNSKLPVGTPDYIAPEVLTT  177 (330)
T ss_pred             CCceeeecccCCccccCHHHhcc
Confidence                   2257889999998753

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.6e-33  Score=236.32  Aligned_cols=164  Identities=24%  Similarity=0.386  Sum_probs=146.3

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|.+.+.||+|+||.||+|.+..+++.||+|++++..    .....+.+|+.++..+.|+++     +++++.+.+++.
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~   75 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWI-----VKLYYSFQDEEH   75 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCc-----cchhhheecCCe
Confidence            46999999999999999999999999999999998543    344567889999999998888     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      +|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++.....
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~  153 (350)
T cd05573          76 LYLVMEYMPGGDLMNLLIRKD--VFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNK  153 (350)
T ss_pred             EEEEEcCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence            99999999 999999998764  799999999999999999999999999999999999999999999999999875432


Q ss_pred             C-----------------------------------cccceeeeeceeEee
Q 024661          247 F-----------------------------------SFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ~-----------------------------------~~~~~~y~ape~~~~  262 (264)
                      .                                   ..+|..|+|||++.+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  204 (350)
T cd05573         154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRG  204 (350)
T ss_pred             cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcC
Confidence            2                                   247889999998653

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-33  Score=236.59  Aligned_cols=164  Identities=27%  Similarity=0.391  Sum_probs=146.6

Q ss_pred             eEE--EeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           94 YRI--LSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        94 y~~--~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      |++  .+.||+|.||+||-|+++.+|+.||||+|.+.   .+....+.+|+.+|+.+.||.+     |.+.--|+..+.+
T Consensus       564 YQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGi-----V~le~M~ET~erv  638 (888)
T KOG4236|consen  564 YQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGI-----VNLECMFETPERV  638 (888)
T ss_pred             HHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCe-----eEEEEeecCCceE
Confidence            555  36899999999999999999999999999753   3445788999999999999988     9999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC---cEEeccCCCCCcCC
Q 024661          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE---YVKVPDYKVPSPRH  245 (264)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~---~v~l~Dfg~a~~~~  245 (264)
                      |+|||-+.|++.+.+-+....++++.....++.||+.||.|||.++|+|+||||+|||+.+..   ++||||||+|+.+.
T Consensus       639 FVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIg  718 (888)
T KOG4236|consen  639 FVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIG  718 (888)
T ss_pred             EEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecc
Confidence            999999988888888776667999999999999999999999999999999999999998653   89999999999876


Q ss_pred             CC-----cccceeeeeceeEee
Q 024661          246 AF-----SFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~~-----~~~~~~y~ape~~~~  262 (264)
                      +.     ..||+.|+|||+++.
T Consensus       719 EksFRrsVVGTPAYLaPEVLrn  740 (888)
T KOG4236|consen  719 EKSFRRSVVGTPAYLAPEVLRN  740 (888)
T ss_pred             hhhhhhhhcCCccccCHHHHhh
Confidence            53     358999999999863

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=7.5e-33  Score=234.97  Aligned_cols=166  Identities=23%  Similarity=0.372  Sum_probs=145.8

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCC-cEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ..++|.+.+.||+|+||.||+|.+..++ ..||+|.+.+..    ...+.+.+|+.+++.+.|+|+     +++++++.+
T Consensus        28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~I-----v~~~~~~~~  102 (340)
T PTZ00426         28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFC-----VNLYGSFKD  102 (340)
T ss_pred             ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCC-----cceEEEEEe
Confidence            3467999999999999999999876654 689999987532    334567889999999999988     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      .+.+|+||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++..
T Consensus       103 ~~~~~lv~Ey~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~  180 (340)
T PTZ00426        103 ESYLYLVLEFVIGGEFFTFLRRNK--RFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKV  180 (340)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCee
Confidence            99999999999 999999998765  799999999999999999999999999999999999999999999999999976


Q ss_pred             CCC---CcccceeeeeceeEee
Q 024661          244 RHA---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       244 ~~~---~~~~~~~y~ape~~~~  262 (264)
                      ...   ...+|..|||||++.+
T Consensus       181 ~~~~~~~~~gt~~y~aPE~~~~  202 (340)
T PTZ00426        181 VDTRTYTLCGTPEYIAPEILLN  202 (340)
T ss_pred             cCCCcceecCChhhcCHHHHhC
Confidence            433   3357889999998653

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-33  Score=238.94  Aligned_cols=164  Identities=23%  Similarity=0.334  Sum_probs=143.0

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEec---hhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      +...+...++..||+|+||+||+|++-++   ||||+++.   .....+.|++|+.++++-+|.||     +-|.+++..
T Consensus       388 eIp~~ev~l~~rIGsGsFGtV~Rg~whGd---VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NI-----lLFMG~~~~  459 (678)
T KOG0193|consen  388 EIPPEEVLLGERIGSGSFGTVYRGRWHGD---VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENI-----LLFMGACMN  459 (678)
T ss_pred             ccCHHHhhccceeccccccceeecccccc---eEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhh-----eeeehhhcC
Confidence            34445577889999999999999998744   99999974   34577899999999999999998     999999988


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      ... .||+.+| |-+|+.+++... ..|+......|++||++|+.|||.++|||+|||..||++.++++|||+|||+++.
T Consensus       460 p~~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatv  537 (678)
T KOG0193|consen  460 PPL-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATV  537 (678)
T ss_pred             Cce-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceee
Confidence            777 9999999 889999998655 4699999999999999999999999999999999999999999999999999986


Q ss_pred             CCC--------CcccceeeeeceeEe
Q 024661          244 RHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~--------~~~~~~~y~ape~~~  261 (264)
                      ...        ...+...|||||+++
T Consensus       538 k~~w~g~~q~~qp~gsilwmAPEvIR  563 (678)
T KOG0193|consen  538 KTRWSGEQQLEQPHGSLLWMAPEVIR  563 (678)
T ss_pred             eeeeccccccCCCccchhhhcHHHHh
Confidence            443        224566799999986

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=1e-32  Score=229.11  Aligned_cols=165  Identities=25%  Similarity=0.408  Sum_probs=144.3

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      ++|++.++||.|+||.||+|.+..+++.||+|+++...  .....+.+|+.+++.++|+|+     +++++++.+++..+
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~~~   79 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANI-----VTLHDIIHTERCLT   79 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCE-----eeEEEEEcCCCeEE
Confidence            56999999999999999999999999999999987432  234567789999999999887     99999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---
Q 024661          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---  246 (264)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---  246 (264)
                      +||||+.++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....   
T Consensus        80 lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~  158 (288)
T cd07871          80 LVFEYLDSDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK  158 (288)
T ss_pred             EEEeCCCcCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc
Confidence            999999779999987654 3578999999999999999999999999999999999999999999999999865321   


Q ss_pred             ---CcccceeeeeceeEee
Q 024661          247 ---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~~  262 (264)
                         ...++..|||||++.+
T Consensus       159 ~~~~~~~~~~y~aPE~~~~  177 (288)
T cd07871         159 TYSNEVVTLWYRPPDVLLG  177 (288)
T ss_pred             cccCceecccccChHHhcC
Confidence               2346888999998753

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=1.3e-32  Score=232.15  Aligned_cols=158  Identities=23%  Similarity=0.345  Sum_probs=139.3

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEe
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE  173 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e  173 (264)
                      +.||+|+||.||+|.+..+|+.+|+|++++..    .....+.+|+.+++.+.|+++     +.+++.+...+.+|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i-----~~~~~~~~~~~~~~lv~e   75 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFL-----TALKYSFQTHDRLCFVME   75 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCC-----CCEEEEEEcCCEEEEEEe
Confidence            46999999999999999999999999998532    233566789999999999988     999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC------C
Q 024661          174 KL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH------A  246 (264)
Q Consensus       174 ~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~------~  246 (264)
                      |+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++....      .
T Consensus        76 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~  153 (323)
T cd05571          76 YANGGELFFHLSRER--VFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMK  153 (323)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCccc
Confidence            99 899999998765  78999999999999999999999999999999999999999999999999987532      1


Q ss_pred             CcccceeeeeceeEee
Q 024661          247 FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ~~~~~~~y~ape~~~~  262 (264)
                      ...+|..|||||++.+
T Consensus       154 ~~~gt~~y~aPE~~~~  169 (323)
T cd05571         154 TFCGTPEYLAPEVLED  169 (323)
T ss_pred             ceecCccccChhhhcC
Confidence            2357889999998753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-32  Score=232.97  Aligned_cols=164  Identities=23%  Similarity=0.336  Sum_probs=144.1

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++.+.||+|+||.||++.+..+++.||+|++.+..    ...+.+.+|+.+++.++|+++     +.+++++.++++
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~   75 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWI-----TNLHYAFQDENN   75 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCC-----CceEEEEecCCe
Confidence            46999999999999999999999999999999997532    234557789999999988887     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      +|+||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++.....
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  154 (331)
T cd05597          76 LYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA  154 (331)
T ss_pred             EEEEEecCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence            99999999 999999997643 3689999999999999999999999999999999999999999999999999865322


Q ss_pred             -------CcccceeeeeceeEe
Q 024661          247 -------FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 -------~~~~~~~y~ape~~~  261 (264)
                             ...+|..|||||++.
T Consensus       155 ~~~~~~~~~~gt~~y~aPE~~~  176 (331)
T cd05597         155 DGTVQSNVAVGTPDYISPEILQ  176 (331)
T ss_pred             CCCccccceeccccccCHHHHh
Confidence                   124788999999875

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=1.8e-32  Score=227.29  Aligned_cols=164  Identities=21%  Similarity=0.295  Sum_probs=143.5

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      |++.+.||+|+||.||+|.+..+++.||+|.+.+..    .....+.+|+.+++.+.|+++     +.+++.+.+.+.++
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i-----v~~~~~~~~~~~~~   76 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFV-----VSLAYAYETKDALC   76 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcE-----EEEEEEEccCCeEE
Confidence            788999999999999999999999999999987432    223456789999999998877     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC--
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA--  246 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~--  246 (264)
                      +||||+ +++|.+++.......+++..+..++.|++.||+|||++||+||||||+|||++.++.++|+|||++.....  
T Consensus        77 lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~  156 (285)
T cd05631          77 LVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE  156 (285)
T ss_pred             EEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence            999999 89999888755444689999999999999999999999999999999999999999999999999875322  


Q ss_pred             ---CcccceeeeeceeEee
Q 024661          247 ---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~~  262 (264)
                         ...++..|||||++.+
T Consensus       157 ~~~~~~g~~~y~aPE~~~~  175 (285)
T cd05631         157 TVRGRVGTVGYMAPEVINN  175 (285)
T ss_pred             eecCCCCCCCccCHhhhcC
Confidence               2357889999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=1.4e-32  Score=235.96  Aligned_cols=164  Identities=21%  Similarity=0.326  Sum_probs=144.9

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      ..++|++.+.||+|+||.||+|.+..+++.+|+|++.+..    .....+.+|+.+++.++|+++     +.+++++.+.
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~i-----v~~~~~~~~~  115 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWI-----VQLHYAFQDD  115 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCc-----ceEEEEEecC
Confidence            3467999999999999999999999999999999997532    233456789999999999888     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      +.+|+||||+ +|+|.+++...   .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus       116 ~~~~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~  192 (370)
T cd05596         116 KYLYMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM  192 (370)
T ss_pred             CEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence            9999999999 99999998764   4889999999999999999999999999999999999999999999999998754


Q ss_pred             CC-------CcccceeeeeceeEe
Q 024661          245 HA-------FSFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~~-------~~~~~~~y~ape~~~  261 (264)
                      ..       ...+|..|||||++.
T Consensus       193 ~~~~~~~~~~~~gt~~y~aPE~~~  216 (370)
T cd05596         193 DANGMVRCDTAVGTPDYISPEVLK  216 (370)
T ss_pred             cCCCcccCCCCCCCcCeECHHHhc
Confidence            32       235889999999865

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-33  Score=225.88  Aligned_cols=170  Identities=22%  Similarity=0.333  Sum_probs=148.4

Q ss_pred             eCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEe---chhhhHHHHHHHHHHHHHHhccCCCCcceEEEceee
Q 024661           86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (264)
Q Consensus        86 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~  162 (264)
                      ....+..+|...+.||.|+||.|+.+.++.+|+.||||.+.   ......++..+|+.+|+.++|+|+     +.+.+.+
T Consensus        16 ~~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNI-----i~l~di~   90 (359)
T KOG0660|consen   16 ELFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENI-----IGLLDIF   90 (359)
T ss_pred             eEEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCc-----ceEEeec
Confidence            33456677888899999999999999999999999999886   234556788999999999999998     7877776


Q ss_pred             ee-----CCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEecc
Q 024661          163 DY-----RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  237 (264)
Q Consensus       163 ~~-----~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~D  237 (264)
                      .-     -+.+|+|+|+|+.+|.+.+++.+  .++++.+..++.||+.||.|+|+.+|+|||+||.|+|++.++.+||+|
T Consensus        91 ~p~~~~~f~DvYiV~elMetDL~~iik~~~--~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~D  168 (359)
T KOG0660|consen   91 RPPSRDKFNDVYLVFELMETDLHQIIKSQQ--DLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICD  168 (359)
T ss_pred             ccccccccceeEEehhHHhhHHHHHHHcCc--cccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEecc
Confidence            54     46799999999999999999876  699999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcCCC--------CcccceeeeeceeEee
Q 024661          238 YKVPSPRHA--------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       238 fg~a~~~~~--------~~~~~~~y~ape~~~~  262 (264)
                      ||+|+....        ....|.+|-|||++.+
T Consensus       169 FGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~  201 (359)
T KOG0660|consen  169 FGLARYLDKFFEDGFMTEYVATRWYRAPELLLN  201 (359)
T ss_pred             ccceeeccccCcccchhcceeeeeecCHHHHhc
Confidence            999998753        2235778999998754

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=1.8e-32  Score=235.31  Aligned_cols=165  Identities=19%  Similarity=0.296  Sum_probs=145.6

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ...++|++.+.||+|+||.||+|.+..+++.+|+|++.+..    .....+.+|+.+++.+.|+++     +++++.+.+
T Consensus        40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~i-----v~~~~~~~~  114 (371)
T cd05622          40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV-----VQLFYAFQD  114 (371)
T ss_pred             cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEEc
Confidence            34478999999999999999999999999999999987532    233456789999999999888     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      ...+|+||||+ +++|.+++...   .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++..
T Consensus       115 ~~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~  191 (371)
T cd05622         115 DRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK  191 (371)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeE
Confidence            99999999999 89999998764   489999999999999999999999999999999999999999999999999875


Q ss_pred             CCC-------CcccceeeeeceeEe
Q 024661          244 RHA-------FSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~-------~~~~~~~y~ape~~~  261 (264)
                      ...       ...+|..|||||++.
T Consensus       192 ~~~~~~~~~~~~~gt~~y~aPE~l~  216 (371)
T cd05622         192 MNKEGMVRCDTAVGTPDYISPEVLK  216 (371)
T ss_pred             cCcCCcccccCcccCccccCHHHHh
Confidence            432       335889999999864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=8.2e-34  Score=229.72  Aligned_cols=162  Identities=23%  Similarity=0.390  Sum_probs=138.1

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC-----CE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR-----NH  167 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~-----~~  167 (264)
                      .|.-.+.+|+|+||.||+|....+++.||||.+-.+....   .+|+++|+.+.|+|+     |++.-+|...     -+
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k---nrEl~im~~l~HpNI-----V~L~~~f~~~~~~d~~~   96 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK---NRELQIMRKLDHPNI-----VRLLYFFSSSTESDEVY   96 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC---cHHHHHHHhcCCcCe-----eeEEEEEEecCCCchhH
Confidence            4888999999999999999999999999999876544433   349999999999998     9998887652     25


Q ss_pred             EEEEEecCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC-CcEEeccCCCCCcC
Q 024661          168 ICIVFEKLGPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA-EYVKVPDYKVPSPR  244 (264)
Q Consensus       168 ~~lv~e~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~-~~v~l~Dfg~a~~~  244 (264)
                      ..+||||+..+|.++++..  .+..++...++.+..||+.||.|||+.||+||||||.|+|+|.+ |.+||||||.|...
T Consensus        97 lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L  176 (364)
T KOG0658|consen   97 LNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL  176 (364)
T ss_pred             HHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence            6789999999999999842  23478888999999999999999999999999999999999976 89999999999874


Q ss_pred             CC-----CcccceeeeeceeEee
Q 024661          245 HA-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       245 ~~-----~~~~~~~y~ape~~~~  262 (264)
                      ..     +.+-+.+|-|||++.+
T Consensus       177 ~~~epniSYicSRyYRaPELifg  199 (364)
T KOG0658|consen  177 VKGEPNISYICSRYYRAPELIFG  199 (364)
T ss_pred             ccCCCceeEEEeccccCHHHHcC
Confidence            43     3346778999998765

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=2.4e-32  Score=231.23  Aligned_cols=165  Identities=21%  Similarity=0.313  Sum_probs=144.0

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++.+.||+|+||.||++++..+++.+|+|++.+..    .....+.+|+.++..+.|+++     +.+++++.+.+.
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~l~~~~~~~~~   75 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWI-----TTLHYAFQDENY   75 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEEcCCE
Confidence            46999999999999999999999999999999987532    233456778888888888877     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      .|+||||+ +|+|.+++.... ..+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        76 ~~lv~Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~  154 (331)
T cd05624          76 LYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ  154 (331)
T ss_pred             EEEEEeCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence            99999999 999999998643 3689999999999999999999999999999999999999999999999999865332


Q ss_pred             -------CcccceeeeeceeEee
Q 024661          247 -------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 -------~~~~~~~y~ape~~~~  262 (264)
                             ...++..|||||++.+
T Consensus       155 ~~~~~~~~~~gt~~y~aPE~~~~  177 (331)
T cd05624         155 DGTVQSSVAVGTPDYISPEILQA  177 (331)
T ss_pred             CCceeeccccCCcccCCHHHHhc
Confidence                   2357889999998753

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-33  Score=235.35  Aligned_cols=162  Identities=23%  Similarity=0.324  Sum_probs=144.2

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      .++++++||+|.||.||.|.+..+. .||+|.++......+.+.+|+++|+.|+|+++     |++++++..++.+||||
T Consensus       207 ~l~l~~~LG~G~FG~V~~g~~~~~~-~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~l-----V~l~gV~~~~~piyIVt  280 (468)
T KOG0197|consen  207 ELKLIRELGSGQFGEVWLGKWNGST-KVAVKTIKEGSMSPEAFLREAQIMKKLRHEKL-----VKLYGVCTKQEPIYIVT  280 (468)
T ss_pred             HHHHHHHhcCCccceEEEEEEcCCC-cccceEEeccccChhHHHHHHHHHHhCcccCe-----EEEEEEEecCCceEEEE
Confidence            3566889999999999999997552 49999998777777889999999999999998     99999999989999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCCcc--
Q 024661          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSF--  249 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~~~--  249 (264)
                      ||+ .|+|.++|+......++....+.++.||++||+||+++++|||||..+|||++++..+||+|||+|+......+  
T Consensus       281 E~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~  360 (468)
T KOG0197|consen  281 EYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTA  360 (468)
T ss_pred             EecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCceee
Confidence            999 99999999986667899999999999999999999999999999999999999999999999999996443332  


Q ss_pred             -----cceeeeeceeE
Q 024661          250 -----QTFLSMASRVY  260 (264)
Q Consensus       250 -----~~~~y~ape~~  260 (264)
                           ....|.|||.+
T Consensus       361 ~~~~kfPIkWtAPEa~  376 (468)
T KOG0197|consen  361 SEGGKFPIKWTAPEAL  376 (468)
T ss_pred             cCCCCCCceecCHHHH
Confidence                 12359999975

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.3e-33  Score=236.12  Aligned_cols=167  Identities=26%  Similarity=0.429  Sum_probs=153.2

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE-
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH-  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~-  167 (264)
                      ++|..++++|+|+||.+++++++..+..+++|.++..   ...++....|+.+++++.|||+     |.+.+.|..++. 
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~i-----v~y~ds~~~~~~~   78 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNI-----VEYKDSFEEDGQL   78 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCe-----eeeccchhcCCce
Confidence            5799999999999999999999999999999998743   3455678899999999999998     999999999887 


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      +||||+|| ||+|.+.+...++..|+++.++.|+.|++.|+.|||+++|+|||||+.||+++.++.|+|+|||+|+....
T Consensus        79 l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~  158 (426)
T KOG0589|consen   79 LCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP  158 (426)
T ss_pred             EEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence            99999999 99999999988777899999999999999999999999999999999999999999999999999987655


Q ss_pred             C------cccceeeeeceeEeec
Q 024661          247 F------SFQTFLSMASRVYICI  263 (264)
Q Consensus       247 ~------~~~~~~y~ape~~~~~  263 (264)
                      .      ..||++||.||++.++
T Consensus       159 ~~~~a~tvvGTp~YmcPEil~d~  181 (426)
T KOG0589|consen  159 EDSLASTVVGTPYYMCPEILSDI  181 (426)
T ss_pred             chhhhheecCCCcccCHHHhCCC
Confidence            4      4699999999998765

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-34  Score=259.92  Aligned_cols=166  Identities=21%  Similarity=0.317  Sum_probs=148.6

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh----hHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      .++|.+++.||+|+||.|.+++.+.+++.||+|++++...    ....|..|.++|.....     .++++++..|+++.
T Consensus        74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns-----~Wiv~LhyAFQD~~  148 (1317)
T KOG0612|consen   74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNS-----EWIVQLHYAFQDER  148 (1317)
T ss_pred             HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCc-----HHHHHHHHHhcCcc
Confidence            4679999999999999999999999999999999987543    34567788888876654     45599999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      ++|+||||+ ||+|..++.+..  .++++.+++|+..|+.||+-||+.|+|||||||+|||||..|++||+|||.|-...
T Consensus       149 ~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~  226 (1317)
T KOG0612|consen  149 YLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMD  226 (1317)
T ss_pred             ceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcC
Confidence            999999999 999999999886  89999999999999999999999999999999999999999999999999986644


Q ss_pred             -------CCcccceeeeeceeEeec
Q 024661          246 -------AFSFQTFLSMASRVYICI  263 (264)
Q Consensus       246 -------~~~~~~~~y~ape~~~~~  263 (264)
                             ....||+.|++||++.++
T Consensus       227 ~dG~V~s~~aVGTPDYISPEvLqs~  251 (1317)
T KOG0612|consen  227 ADGTVRSSVAVGTPDYISPEVLQSQ  251 (1317)
T ss_pred             CCCcEEeccccCCCCccCHHHHHhh
Confidence                   344699999999998765

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=4e-32  Score=229.25  Aligned_cols=164  Identities=22%  Similarity=0.293  Sum_probs=142.0

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      +|++.+.||+|+||.||+|.+..+++.||+|++.+..    ...+.+..|.+++..+.|++    +++.+++++.+.+.+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~----~i~~~~~~~~~~~~~   76 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPP----FLTQLHSCFQTMDRL   76 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCC----ceeeeEEEEEcCCEE
Confidence            4889999999999999999999999999999997532    33456778888888887764    248889999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC--
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH--  245 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~--  245 (264)
                      |+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++....  
T Consensus        77 ~lv~E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~  154 (324)
T cd05587          77 YFVMEYVNGGDLMYHIQQVG--KFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG  154 (324)
T ss_pred             EEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence            9999999 999999998765  68999999999999999999999999999999999999999999999999986421  


Q ss_pred             ----CCcccceeeeeceeEee
Q 024661          246 ----AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ----~~~~~~~~y~ape~~~~  262 (264)
                          ....+|..|+|||++.+
T Consensus       155 ~~~~~~~~gt~~y~aPE~~~~  175 (324)
T cd05587         155 GKTTRTFCGTPDYIAPEIIAY  175 (324)
T ss_pred             CCceeeecCCccccChhhhcC
Confidence                12347889999998754

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=3.8e-32  Score=229.27  Aligned_cols=158  Identities=22%  Similarity=0.334  Sum_probs=138.9

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEe
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE  173 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e  173 (264)
                      +.||+|+||.||++.+..+|..||+|+++...    .....+.+|+.+++.+.|+++     +++++.+...+.+|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----~~~~~~~~~~~~~~lv~E   75 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL-----TALKYAFQTHDRLCFVME   75 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCC-----cceeeEEecCCEEEEEEe
Confidence            46899999999999999999999999997532    234556789999999999988     999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC------C
Q 024661          174 KL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH------A  246 (264)
Q Consensus       174 ~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~------~  246 (264)
                      |+ +++|..++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....      .
T Consensus        76 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~  153 (323)
T cd05595          76 YANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK  153 (323)
T ss_pred             CCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccc
Confidence            99 899999887754  78999999999999999999999999999999999999999999999999986521      1


Q ss_pred             CcccceeeeeceeEee
Q 024661          247 FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ~~~~~~~y~ape~~~~  262 (264)
                      ...++..|||||++..
T Consensus       154 ~~~gt~~y~aPE~~~~  169 (323)
T cd05595         154 TFCGTPEYLAPEVLED  169 (323)
T ss_pred             cccCCcCcCCcccccC
Confidence            2357889999998753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.7e-32  Score=234.58  Aligned_cols=160  Identities=24%  Similarity=0.413  Sum_probs=142.8

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      ..+|++.+.||+|+||.||+|.+..+++.||+|...     ...+.+|+++++.++|+|+     ++++++|......++
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----~~~~~~E~~il~~l~HpnI-----v~~~~~~~~~~~~~l  160 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAINHPSI-----IQLKGTFTYNKFTCL  160 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-----hhhhHHHHHHHHhCCCCCC-----CCEeEEEEECCeeEE
Confidence            467999999999999999999999999999999654     2456789999999999988     999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC----
Q 024661          171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA----  246 (264)
Q Consensus       171 v~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~----  246 (264)
                      |||+++++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+|.....    
T Consensus       161 v~e~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~  238 (391)
T PHA03212        161 ILPRYKTDLYCYLAAKR--NIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINAN  238 (391)
T ss_pred             EEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccccc
Confidence            99999889999987764  689999999999999999999999999999999999999999999999999864221    


Q ss_pred             ---CcccceeeeeceeEee
Q 024661          247 ---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~~  262 (264)
                         ...+|..|+|||++.+
T Consensus       239 ~~~~~~gt~~y~aPE~~~~  257 (391)
T PHA03212        239 KYYGWAGTIATNAPELLAR  257 (391)
T ss_pred             ccccccCccCCCChhhhcC
Confidence               2358899999998753

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=4.3e-32  Score=229.37  Aligned_cols=158  Identities=22%  Similarity=0.354  Sum_probs=139.2

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEe
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE  173 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e  173 (264)
                      +.||+|+||.||++.+..+++.||+|++.+..    .....+.+|+.+++.+.|+++     +.+++.+...+.+|+|||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~~~~~~lv~E   75 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFL-----TSLKYSFQTKDRLCFVME   75 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCC-----cceEEEEEcCCEEEEEEe
Confidence            36899999999999999999999999997532    334567789999999999888     999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC------C
Q 024661          174 KL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH------A  246 (264)
Q Consensus       174 ~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~------~  246 (264)
                      |+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++....      .
T Consensus        76 y~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~  153 (328)
T cd05593          76 YVNGGELFFHLSRER--VFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMK  153 (328)
T ss_pred             CCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccc
Confidence            99 999999987754  79999999999999999999999999999999999999999999999999987522      1


Q ss_pred             CcccceeeeeceeEee
Q 024661          247 FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ~~~~~~~y~ape~~~~  262 (264)
                      ...++..|||||++.+
T Consensus       154 ~~~gt~~y~aPE~~~~  169 (328)
T cd05593         154 TFCGTPEYLAPEVLED  169 (328)
T ss_pred             cccCCcCccChhhhcC
Confidence            2357889999998753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.8e-31  Score=232.37  Aligned_cols=161  Identities=22%  Similarity=0.310  Sum_probs=141.8

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      ...|.+.+.||+|+||.||+|.+..+++.|++|....     ..+.+|+++++.++|+|+     +++++++...+..|+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----~~~~~E~~iL~~L~HpnI-----v~l~~~~~~~~~~~l  237 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----ASSVHEARLLRRLSHPAV-----LALLDVRVVGGLTCL  237 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----cCHHHHHHHHHHCCCCCC-----CcEEEEEEECCEEEE
Confidence            4579999999999999999999999999999996432     235679999999999988     999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC----
Q 024661          171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA----  246 (264)
Q Consensus       171 v~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~----  246 (264)
                      |||++.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+++....    
T Consensus       238 v~e~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~  316 (461)
T PHA03211        238 VLPKYRSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST  316 (461)
T ss_pred             EEEccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceeccccccc
Confidence            99999889999987643 3699999999999999999999999999999999999999999999999999875322    


Q ss_pred             ----CcccceeeeeceeEee
Q 024661          247 ----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ----~~~~~~~y~ape~~~~  262 (264)
                          ...+|..|||||++.+
T Consensus       317 ~~~~~~~GT~~Y~APE~~~~  336 (461)
T PHA03211        317 PFHYGIAGTVDTNAPEVLAG  336 (461)
T ss_pred             ccccccCCCcCCcCHHHHcC
Confidence                2247899999998754

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=5.9e-32  Score=228.96  Aligned_cols=164  Identities=22%  Similarity=0.325  Sum_probs=142.9

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++.++||+|+||.||++.+..+++.+|+|++.+..    .....+.+|+.++..+.|+++     +.+++.+.+.+.
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~   75 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWI-----TTLHYAFQDENN   75 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCE-----eeEEEEEecCCE
Confidence            36999999999999999999999999999999987532    223456778888888888776     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      +|+||||+ +|+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++.....
T Consensus        76 ~~lv~ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~  154 (332)
T cd05623          76 LYLVMDYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLME  154 (332)
T ss_pred             EEEEEeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence            99999999 999999998643 3689999999999999999999999999999999999999999999999999864321


Q ss_pred             -------CcccceeeeeceeEe
Q 024661          247 -------FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 -------~~~~~~~y~ape~~~  261 (264)
                             ...+|..|||||++.
T Consensus       155 ~~~~~~~~~~gt~~y~aPE~~~  176 (332)
T cd05623         155 DGTVQSSVAVGTPDYISPEILQ  176 (332)
T ss_pred             CCcceecccccCccccCHHHHh
Confidence                   235788999999875

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=7.5e-32  Score=228.28  Aligned_cols=163  Identities=22%  Similarity=0.352  Sum_probs=140.2

Q ss_pred             CeEEEeecccCccEEEEEEEeC---CCCcEEEEEEEechh-----hhHHHHHHHHHHHHHHh-ccCCCCcceEEEceeee
Q 024661           93 RYRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~  163 (264)
                      +|++.+.||+|+||.||++++.   .+++.+|+|++.+..     ...+.+..|+.+++.+. |+++     +.+++++.
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i-----~~~~~~~~   75 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFL-----VTLHYAFQ   75 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCc-----ccEEEEEe
Confidence            4899999999999999999864   468899999987532     23456778999999985 5555     99999999


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                      .++.+|+||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus        76 ~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~  153 (332)
T cd05614          76 TEAKLHLILDYVSGGEMFTHLYQRD--NFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSK  153 (332)
T ss_pred             cCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCc
Confidence            999999999999 899999998765  68999999999999999999999999999999999999999999999999987


Q ss_pred             cCCC-------CcccceeeeeceeEee
Q 024661          243 PRHA-------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       243 ~~~~-------~~~~~~~y~ape~~~~  262 (264)
                      ....       ...+|..|||||++.+
T Consensus       154 ~~~~~~~~~~~~~~gt~~y~aPE~~~~  180 (332)
T cd05614         154 EFLSEEKERTYSFCGTIEYMAPEIIRG  180 (332)
T ss_pred             cccccCCCccccccCCccccCHHHhcC
Confidence            5321       2347889999998754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.9e-32  Score=227.04  Aligned_cols=156  Identities=23%  Similarity=0.359  Sum_probs=138.0

Q ss_pred             cccCccEEEEEEEeCCCCcEEEEEEEech----hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC
Q 024661          100 MGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (264)
Q Consensus       100 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  175 (264)
                      ||+|+||.||+|.+..+++.||+|++++.    ......+.+|+.+++.++|+|+     +++++.+.+.+..|+||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~lv~e~~   75 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFI-----VPLKFSFQSPEKLYLVLAFI   75 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcE-----eceeeEEecCCeEEEEEcCC
Confidence            79999999999999999999999999753    2334567789999999998887     99999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC------Cc
Q 024661          176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA------FS  248 (264)
Q Consensus       176 -~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~------~~  248 (264)
                       +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++.....      ..
T Consensus        76 ~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~  153 (312)
T cd05585          76 NGGELFHHLQREG--RFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTF  153 (312)
T ss_pred             CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccc
Confidence             999999998754  799999999999999999999999999999999999999999999999999875321      23


Q ss_pred             ccceeeeeceeEee
Q 024661          249 FQTFLSMASRVYIC  262 (264)
Q Consensus       249 ~~~~~y~ape~~~~  262 (264)
                      .+|..|||||++.+
T Consensus       154 ~gt~~y~aPE~~~~  167 (312)
T cd05585         154 CGTPEYLAPELLLG  167 (312)
T ss_pred             cCCcccCCHHHHcC
Confidence            57889999998754

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=5.1e-34  Score=244.81  Aligned_cols=165  Identities=25%  Similarity=0.448  Sum_probs=149.3

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEe-chhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~-~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      +.|.|+..||.|+||+||+|..+.++-..|.|+|. +.....+.+.-|++||..+.||++     +.+++.|..++.+||
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~i-----vkLl~ayy~enkLwi  106 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVI-----VKLLSAYYFENKLWI  106 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHH-----HHHHHHHhccCceEE
Confidence            56999999999999999999999888888899887 455677889999999999999988     999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC-----
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR-----  244 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~-----  244 (264)
                      +.||| ||-...++-... ..+++..+..+++|++.||.|||+++|||||||..|||++-+|.++|+|||.+...     
T Consensus       107 liEFC~GGAVDaimlEL~-r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~q  185 (1187)
T KOG0579|consen  107 LIEFCGGGAVDAIMLELG-RVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQ  185 (1187)
T ss_pred             EEeecCCchHhHHHHHhc-cccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHh
Confidence            99999 777776665543 57999999999999999999999999999999999999999999999999998653     


Q ss_pred             -CCCcccceeeeeceeEee
Q 024661          245 -HAFSFQTFLSMASRVYIC  262 (264)
Q Consensus       245 -~~~~~~~~~y~ape~~~~  262 (264)
                       ....+||++|||||+++|
T Consensus       186 kRDsFIGTPYWMAPEVvmC  204 (1187)
T KOG0579|consen  186 KRDSFIGTPYWMAPEVVMC  204 (1187)
T ss_pred             hhccccCCcccccchheee
Confidence             346689999999999998

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.98  E-value=6.7e-32  Score=228.96  Aligned_cols=163  Identities=26%  Similarity=0.379  Sum_probs=140.7

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC----
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR----  165 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~----  165 (264)
                      +|++.+.||+|+||.||+|.+..+++.||+|.+...   ......+.+|+.+++.++|+|+     +++++++...    
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~~~~~~~~~~~   75 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDI-----VEIKHIMLPPSRRE   75 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCE-----eeecceEeccCCCC
Confidence            599999999999999999999999999999988642   2234567889999999999988     8888877542    


Q ss_pred             -CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 -NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 -~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                       ..+|+||||++++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus        76 ~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~  153 (338)
T cd07859          76 FKDIYVVFELMESDLHQVIKAND--DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA  153 (338)
T ss_pred             CceEEEEEecCCCCHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence             3589999999889999998765  6999999999999999999999999999999999999999999999999998753


Q ss_pred             CC---------CcccceeeeeceeEee
Q 024661          245 HA---------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       245 ~~---------~~~~~~~y~ape~~~~  262 (264)
                      ..         ...++..|+|||++.+
T Consensus       154 ~~~~~~~~~~~~~~~t~~y~aPE~~~~  180 (338)
T cd07859         154 FNDTPTAIFWTDYVATRWYRAPELCGS  180 (338)
T ss_pred             ccccCccccccCCCCCCCcCCHHHHhc
Confidence            21         2357888999998643

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.98  E-value=1.1e-31  Score=226.55  Aligned_cols=158  Identities=23%  Similarity=0.337  Sum_probs=137.6

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEe
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE  173 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e  173 (264)
                      +.||+|+||.||+|.+..+++.+|+|++.+..    .....+.+|+++++.+.|+++     +.+++.+...+.+|+|||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i-----~~~~~~~~~~~~~~lv~E   75 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL-----TALKYSFQTHDRLCFVME   75 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCC-----CceEEEEEcCCEEEEEEe
Confidence            46899999999999999999999999997532    233556778899999988888     999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEeecCCcEEeccCCCCCcCC------
Q 024661          174 KL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH------  245 (264)
Q Consensus       174 ~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~------  245 (264)
                      |+ +++|.+++....  .+++..+..++.||+.||.|||+ +||+||||||+|||++.++.+||+|||++....      
T Consensus        76 ~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~  153 (325)
T cd05594          76 YANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM  153 (325)
T ss_pred             CCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccc
Confidence            99 899999887655  78999999999999999999997 799999999999999999999999999986422      


Q ss_pred             CCcccceeeeeceeEee
Q 024661          246 AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~~~~~~~~y~ape~~~~  262 (264)
                      ....++..|||||++.+
T Consensus       154 ~~~~gt~~y~aPE~~~~  170 (325)
T cd05594         154 KTFCGTPEYLAPEVLED  170 (325)
T ss_pred             ccccCCcccCCHHHHcc
Confidence            12348889999998653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.98  E-value=9.5e-32  Score=226.84  Aligned_cols=164  Identities=23%  Similarity=0.297  Sum_probs=140.9

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      +|++.+.||+|+||.||+|.++.+++.||+|++.+..    ...+.+..|..+++.+.|++    +++.+++++.+.+.+
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~----~i~~~~~~~~~~~~~   76 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPP----FLTQLHSCFQTVDRL   76 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCC----chhheeeEEecCCEE
Confidence            3788999999999999999999999999999997542    23345677888888877653    237788999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC--
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH--  245 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~--  245 (264)
                      |+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++....  
T Consensus        77 ~lv~Ey~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~  154 (323)
T cd05615          77 YFVMEYVNGGDLMYHIQQVG--KFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD  154 (323)
T ss_pred             EEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence            9999999 899999998765  79999999999999999999999999999999999999999999999999987532  


Q ss_pred             ----CCcccceeeeeceeEee
Q 024661          246 ----AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ----~~~~~~~~y~ape~~~~  262 (264)
                          ....+|..|||||++.+
T Consensus       155 ~~~~~~~~gt~~y~aPE~~~~  175 (323)
T cd05615         155 GVTTRTFCGTPDYIAPEIIAY  175 (323)
T ss_pred             CccccCccCCccccCHHHHcC
Confidence                12347889999998754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.98  E-value=1.5e-31  Score=226.20  Aligned_cols=158  Identities=19%  Similarity=0.280  Sum_probs=137.4

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      +.||+|+||.||+|.+..+++.||+|++++..    .....+.+|..+++.+ .|+++     +++++++.+.+.+|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~I-----v~~~~~~~~~~~~~lv~   75 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFL-----VGLHSCFQTESRLFFVI   75 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCC-----CceEEEEEcCCEEEEEE
Confidence            36899999999999999999999999998532    2335577888888888 57777     99999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC------C
Q 024661          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR------H  245 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~------~  245 (264)
                      ||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...      .
T Consensus        76 e~~~~g~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~  153 (329)
T cd05588          76 EFVSGGDLMFHMQRQR--KLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTT  153 (329)
T ss_pred             eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCcc
Confidence            999 899999887654  7999999999999999999999999999999999999999999999999998642      1


Q ss_pred             CCcccceeeeeceeEee
Q 024661          246 AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~~~~~~~~y~ape~~~~  262 (264)
                      ....+|..|||||++.+
T Consensus       154 ~~~~gt~~y~aPE~~~~  170 (329)
T cd05588         154 STFCGTPNYIAPEILRG  170 (329)
T ss_pred             ccccCCccccCHHHHcC
Confidence            23357889999998653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.98  E-value=2.6e-31  Score=224.15  Aligned_cols=164  Identities=23%  Similarity=0.293  Sum_probs=139.5

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      +|.+.+.||+|+||.||+|.+..+++.+|+|++.+..    ........|..++..+.++    ++++.+++++.+.+.+
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~----~~i~~~~~~~~~~~~~   76 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKP----PFLTQLHSCFQTMDRL   76 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCC----CeEeeEEEEEecCCEE
Confidence            4889999999999999999999999999999988542    2233456677777776543    3458899999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC--
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH--  245 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~--  245 (264)
                      |+||||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++....  
T Consensus        77 ~lv~E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~  154 (323)
T cd05616          77 YFVMEYVNGGDLMYQIQQVG--RFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD  154 (323)
T ss_pred             EEEEcCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence            9999999 899999988765  68999999999999999999999999999999999999999999999999987532  


Q ss_pred             ----CCcccceeeeeceeEee
Q 024661          246 ----AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ----~~~~~~~~y~ape~~~~  262 (264)
                          ....+|..|||||++.+
T Consensus       155 ~~~~~~~~gt~~y~aPE~~~~  175 (323)
T cd05616         155 GVTTKTFCGTPDYIAPEIIAY  175 (323)
T ss_pred             CCccccCCCChhhcCHHHhcC
Confidence                12357889999998754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.98  E-value=2.1e-31  Score=224.87  Aligned_cols=161  Identities=24%  Similarity=0.346  Sum_probs=137.3

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHH---HhccCCCCcceEEEceeeeeCC
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQR---LARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~---l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      |++.+.||+|+||.||+|.+..+++.||+|++++..    ...+.+.+|++++..   +.|+|+     +++++++.+.+
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i-----~~~~~~~~~~~   75 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFL-----VNLFACFQTED   75 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCCh-----hceeeEEEcCC
Confidence            788999999999999999999999999999997532    233556667666543   456665     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      .+|+||||+ +++|..++...   .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus        76 ~~~lv~E~~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~  152 (324)
T cd05589          76 HVCFVMEYAAGGDLMMHIHTD---VFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGM  152 (324)
T ss_pred             EEEEEEcCCCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence            999999999 89999887653   59999999999999999999999999999999999999999999999999986532


Q ss_pred             ------CCcccceeeeeceeEee
Q 024661          246 ------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ------~~~~~~~~y~ape~~~~  262 (264)
                            ....++..|||||++.+
T Consensus       153 ~~~~~~~~~~g~~~y~aPE~~~~  175 (324)
T cd05589         153 GFGDRTSTFCGTPEFLAPEVLTE  175 (324)
T ss_pred             CCCCcccccccCccccCHhHhcC
Confidence                  12357889999998754

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.2e-33  Score=231.65  Aligned_cols=164  Identities=28%  Similarity=0.374  Sum_probs=148.2

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      ..|+..+.||+|+||.||+|.+..+++.||+|++..+.  ...+.+..|+.++.++.++++     ..+|+.|..+..+|
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~i-----t~yygsyl~g~~Lw   87 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNI-----TEYYGSYLKGTKLW   87 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchH-----HhhhhheeecccHH
Confidence            34888899999999999999999999999999998543  445788899999999999887     89999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC----
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR----  244 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~----  244 (264)
                      ++|||| ||++.+.++...  .+++..+..++++++.||.|||.++.+|||||+.|||+..+|.|||+|||++...    
T Consensus        88 iiMey~~gGsv~~lL~~~~--~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~  165 (467)
T KOG0201|consen   88 IIMEYCGGGSVLDLLKSGN--ILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV  165 (467)
T ss_pred             HHHHHhcCcchhhhhccCC--CCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechh
Confidence            999999 999999998765  5589999999999999999999999999999999999999999999999998643    


Q ss_pred             --CCCcccceeeeeceeEee
Q 024661          245 --HAFSFQTFLSMASRVYIC  262 (264)
Q Consensus       245 --~~~~~~~~~y~ape~~~~  262 (264)
                        .....||++|||||++.+
T Consensus       166 ~rr~tfvGTPfwMAPEVI~~  185 (467)
T KOG0201|consen  166 KRRKTFVGTPFWMAPEVIKQ  185 (467)
T ss_pred             hccccccccccccchhhhcc
Confidence              345679999999999865

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=3e-31  Score=227.18  Aligned_cols=168  Identities=25%  Similarity=0.342  Sum_probs=153.2

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .-.+.|.+.+.||+|.|+.|.+|++.-++..||||++++.   ....+.+.+|+++++.+.|||+     |+++.+.+..
T Consensus        53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnI-----vkl~~v~~t~  127 (596)
T KOG0586|consen   53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNI-----VKLFSVIETE  127 (596)
T ss_pred             ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcce-----eeeeeeeeec
Confidence            3346699999999999999999999999999999999854   2344568999999999999998     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      ..+|+||||+ +|.+++++.++.  +..+..+..++.|++.|++|||+++|||||||.+|||++.+.++||+|||++...
T Consensus       128 ~~lylV~eya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~  205 (596)
T KOG0586|consen  128 ATLYLVMEYASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFF  205 (596)
T ss_pred             ceeEEEEEeccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceee
Confidence            9999999999 999999999987  7888999999999999999999999999999999999999999999999999874


Q ss_pred             C-----CCcccceeeeeceeEeec
Q 024661          245 H-----AFSFQTFLSMASRVYICI  263 (264)
Q Consensus       245 ~-----~~~~~~~~y~ape~~~~~  263 (264)
                      .     ...+|++.|.|||++.+.
T Consensus       206 ~~~~~lqt~cgsppyAaPEl~~g~  229 (596)
T KOG0586|consen  206 DYGLMLQTFCGSPPYAAPELFNGK  229 (596)
T ss_pred             cccccccccCCCCCccChHhhcCc
Confidence            4     356789999999998764

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.97  E-value=6.3e-31  Score=222.56  Aligned_cols=166  Identities=23%  Similarity=0.319  Sum_probs=147.4

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ..++|++.+.||+|+||.||++.+..++..+|+|++...  ....+.+.+|+++++.++|+|+     +++++++.+++.
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~   77 (331)
T cd06649           3 KDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI-----VGFYGAFYSDGE   77 (331)
T ss_pred             CcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCC-----CeEEEEEEECCE
Confidence            347899999999999999999999999999999998743  3445678999999999999988     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      +++||||+ +++|.+++....  .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.++|+|||++....
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  155 (331)
T cd06649          78 ISICMEHMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  155 (331)
T ss_pred             EEEEeecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccc
Confidence            99999999 899999998765  689999999999999999999986 69999999999999999999999999986542


Q ss_pred             C----CcccceeeeeceeEee
Q 024661          246 A----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~----~~~~~~~y~ape~~~~  262 (264)
                      .    ...++..|+|||++.+
T Consensus       156 ~~~~~~~~g~~~y~aPE~~~~  176 (331)
T cd06649         156 DSMANSFVGTRSYMSPERLQG  176 (331)
T ss_pred             ccccccCCCCcCcCCHhHhcC
Confidence            2    3357889999998754

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.97  E-value=3.1e-31  Score=221.80  Aligned_cols=166  Identities=22%  Similarity=0.352  Sum_probs=139.5

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCC----------------CCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCC
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNE----------------KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGG  152 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~----------------~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~  152 (264)
                      .++|++.++||+|+||.||+|.+..                ++..||+|++...  ......+.+|+.+++.+.|+|+  
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni--   81 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNI--   81 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCe--
Confidence            4679999999999999999998532                3457999988753  3345678899999999999887  


Q ss_pred             cceEEEceeeeeCCEEEEEEecC-CCCHHHHHHhcCC-----------------CCCCHHHHHHHHHHHHHHHHHHHHCC
Q 024661          153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSY-----------------RSFPIDLVRELGRQLLESVAFMHELR  214 (264)
Q Consensus       153 ~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~-----------------~~~~~~~~~~i~~qi~~~l~~lH~~~  214 (264)
                         +++++++.+.+..|+||||+ +++|.+++.....                 ..+++..++.++.||+.||.|||++|
T Consensus        82 ---v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~  158 (304)
T cd05096          82 ---IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN  158 (304)
T ss_pred             ---eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence               99999999999999999999 9999999875321                 23677889999999999999999999


Q ss_pred             CeecCCCCCCEEeecCCcEEeccCCCCCcCCCC--------cccceeeeeceeEe
Q 024661          215 LIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF--------SFQTFLSMASRVYI  261 (264)
Q Consensus       215 ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~--------~~~~~~y~ape~~~  261 (264)
                      |+||||||+|||++.++.+||+|||+++.....        ..++..|||||++.
T Consensus       159 ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  213 (304)
T cd05096         159 FVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECIL  213 (304)
T ss_pred             ccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHh
Confidence            999999999999999999999999999754321        22356799999764

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.97  E-value=4.3e-31  Score=226.02  Aligned_cols=165  Identities=24%  Similarity=0.326  Sum_probs=141.9

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .+.++|++.+.||+|+||.||+|.+..+++.+|+|++...   ......+.+|+.+++.+.|+|+     +++++++...
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~   92 (359)
T cd07876          18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNI-----ISLLNVFTPQ   92 (359)
T ss_pred             hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCE-----eeeeeeeccC
Confidence            4568899999999999999999999999999999998642   2345667789999999999888     9999888653


Q ss_pred             ------CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          166 ------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       166 ------~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                            ..+|+||||++++|.+.+..    .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus        93 ~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg  168 (359)
T cd07876          93 KSLEEFQDVYLVMELMDANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG  168 (359)
T ss_pred             CCccccceeEEEEeCCCcCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCC
Confidence                  35799999998888887743    48889999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCC-----CcccceeeeeceeEee
Q 024661          240 VPSPRHA-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       240 ~a~~~~~-----~~~~~~~y~ape~~~~  262 (264)
                      ++.....     ...+|..|+|||++.+
T Consensus       169 ~a~~~~~~~~~~~~~~t~~y~aPE~~~~  196 (359)
T cd07876         169 LARTACTNFMMTPYVVTRYYRAPEVILG  196 (359)
T ss_pred             CccccccCccCCCCcccCCCCCchhccC
Confidence            9975432     2356888999998764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.97  E-value=2.6e-31  Score=224.72  Aligned_cols=158  Identities=20%  Similarity=0.280  Sum_probs=136.7

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      +.||+|+||.||+|.+..+++.+|+|++++..    .....+.+|+.++..+ .|+++     +++++++.+.+.+|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~i-----v~~~~~~~~~~~~~lv~   75 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL-----VGLHSCFQTESRLFFVI   75 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcC-----CceeeEEEeCCEEEEEE
Confidence            46999999999999999999999999998532    2344567788887776 57776     99999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC------
Q 024661          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH------  245 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~------  245 (264)
                      ||+ +++|..++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++....      
T Consensus        76 E~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~  153 (329)
T cd05618          76 EYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT  153 (329)
T ss_pred             eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcc
Confidence            999 899999887654  79999999999999999999999999999999999999999999999999986521      


Q ss_pred             CCcccceeeeeceeEee
Q 024661          246 AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~~~~~~~~y~ape~~~~  262 (264)
                      ....+|..|+|||++.+
T Consensus       154 ~~~~gt~~y~aPE~~~~  170 (329)
T cd05618         154 STFCGTPNYIAPEILRG  170 (329)
T ss_pred             ccccCCccccCHHHHcC
Confidence            23357889999998653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=2.1e-31  Score=218.51  Aligned_cols=149  Identities=23%  Similarity=0.345  Sum_probs=137.7

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      .-.++|++++.||.|.-|+||+|+.+.++..+|+|++.+..    ....+...|-+||+.++||.+     +.+|..|+.
T Consensus        74 l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFl-----PTLYa~fet  148 (459)
T KOG0610|consen   74 LGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFL-----PTLYASFET  148 (459)
T ss_pred             cCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCcc-----chhhheeec
Confidence            33467999999999999999999999999999999998643    334566779999999999988     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                      +++.|++|||| ||+|..+++++....|++..++.|+.+++.||+|||-.|||+|||||+||||.++|+|.|+||-++.
T Consensus       149 ~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~  227 (459)
T KOG0610|consen  149 DKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSL  227 (459)
T ss_pred             cceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccc
Confidence            99999999999 9999999999988899999999999999999999999999999999999999999999999998764

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.97  E-value=2e-31  Score=226.28  Aligned_cols=166  Identities=22%  Similarity=0.297  Sum_probs=136.9

Q ss_pred             CCCeEEEeecccCccEEEEEEEeC-----CCCcEEEEEEEech--hhhHHHHHHHHHHHHHH-hccCCCCcceEEEceee
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWF  162 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~  162 (264)
                      .++|++.++||.|+||.||+|.+.     .+++.||+|+++..  ......+.+|+.+++.+ +|+|+     +++++++
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni-----v~~~~~~   80 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNV-----VNLLGAC   80 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcce-----eeEEeEe
Confidence            367999999999999999999752     34567999998743  23446788999999999 78877     9999987


Q ss_pred             ee-CCEEEEEEecC-CCCHHHHHHhcC-----------------------------------------------------
Q 024661          163 DY-RNHICIVFEKL-GPSLYDFLRKNS-----------------------------------------------------  187 (264)
Q Consensus       163 ~~-~~~~~lv~e~~-~~~L~~~l~~~~-----------------------------------------------------  187 (264)
                      .. .+.++++|||+ +|+|.+++....                                                     
T Consensus        81 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (338)
T cd05102          81 TKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP  160 (338)
T ss_pred             cCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence            66 45689999999 999999997532                                                     


Q ss_pred             -------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC--------Ccccce
Q 024661          188 -------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA--------FSFQTF  252 (264)
Q Consensus       188 -------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~--------~~~~~~  252 (264)
                             ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....        ...++.
T Consensus       161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~  240 (338)
T cd05102         161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPL  240 (338)
T ss_pred             hhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCc
Confidence                   12477888999999999999999999999999999999999999999999999975321        122346


Q ss_pred             eeeeceeEe
Q 024661          253 LSMASRVYI  261 (264)
Q Consensus       253 ~y~ape~~~  261 (264)
                      .|||||++.
T Consensus       241 ~y~aPE~~~  249 (338)
T cd05102         241 KWMAPESIF  249 (338)
T ss_pred             cccCcHHhh
Confidence            799999764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.97  E-value=2.5e-31  Score=224.07  Aligned_cols=158  Identities=21%  Similarity=0.261  Sum_probs=135.6

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      +.||+|+||.||+|++..+++.||+|++.+..    .....+..|.++++.+ .|+++     +.+++++.+.+.+|+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i-----~~~~~~~~~~~~~~lv~   75 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFL-----TALHCCFQTKDRLFFVM   75 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCc-----cceeeEEEcCCeEEEEE
Confidence            46999999999999999999999999997542    2334566788888765 56666     99999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC------
Q 024661          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH------  245 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~------  245 (264)
                      ||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++....      
T Consensus        76 E~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~  153 (321)
T cd05591          76 EYVNGGDLMFQIQRSR--KFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTT  153 (321)
T ss_pred             eCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccc
Confidence            999 899999988765  78999999999999999999999999999999999999999999999999986421      


Q ss_pred             CCcccceeeeeceeEee
Q 024661          246 AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~~~~~~~~y~ape~~~~  262 (264)
                      ....++..|||||++.+
T Consensus       154 ~~~~gt~~y~aPE~~~~  170 (321)
T cd05591         154 TTFCGTPDYIAPEILQE  170 (321)
T ss_pred             cccccCccccCHHHHcC
Confidence            12347889999998653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.97  E-value=2.3e-31  Score=220.66  Aligned_cols=165  Identities=25%  Similarity=0.497  Sum_probs=141.5

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ++|++.+.||+|+||.||+|+++.+++.+|+|+++..   ....+.+.+|+.+++.++|+|+     +++++++..++.+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~   75 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENI-----VELKEAFRRRGKL   75 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccc-----cchhhhEecCCEE
Confidence            4699999999999999999999999999999998743   2335667889999999999988     9999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC--
Q 024661          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA--  246 (264)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~--  246 (264)
                      |+||||+.+++.+.+.... ..+++..++.++.|++.||.|||+.||+|+||||+||+++.++.+||+|||++.....  
T Consensus        76 ~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~  154 (287)
T cd07848          76 YLVFEYVEKNMLELLEEMP-NGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS  154 (287)
T ss_pred             EEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence            9999999555555554432 3689999999999999999999999999999999999999999999999999976432  


Q ss_pred             -----CcccceeeeeceeEee
Q 024661          247 -----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 -----~~~~~~~y~ape~~~~  262 (264)
                           ...++..|+|||++.+
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~  175 (287)
T cd07848         155 NANYTEYVATRWYRSPELLLG  175 (287)
T ss_pred             cccccccccccccCCcHHHcC
Confidence                 2247888999998643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.97  E-value=2.8e-31  Score=223.32  Aligned_cols=158  Identities=22%  Similarity=0.284  Sum_probs=134.9

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      +.||+|+||.||+|.+..+++.||+|++++..    ........|..++... .|+++     +++++.+.+.+.+|+||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i-----~~~~~~~~~~~~~~lv~   75 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFL-----THLYCTFQTKEHLFFVM   75 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCc-----cCeeEEEEeCCEEEEEE
Confidence            46999999999999999999999999998542    2334556677777654 56666     99999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC------
Q 024661          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH------  245 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~------  245 (264)
                      ||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++....      
T Consensus        76 E~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  153 (316)
T cd05620          76 EFLNGGDLMFHIQDKG--RFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRA  153 (316)
T ss_pred             CCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCce
Confidence            999 899999988754  78999999999999999999999999999999999999999999999999986421      


Q ss_pred             CCcccceeeeeceeEee
Q 024661          246 AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~~~~~~~~y~ape~~~~  262 (264)
                      ....++..|+|||++.+
T Consensus       154 ~~~~gt~~y~aPE~~~~  170 (316)
T cd05620         154 STFCGTPDYIAPEILQG  170 (316)
T ss_pred             eccCCCcCccCHHHHcC
Confidence            23357889999998753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.97  E-value=5.8e-31  Score=222.93  Aligned_cols=166  Identities=22%  Similarity=0.319  Sum_probs=146.8

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ..++|++.++||.|+||.||++.+..++..+++|++...  ......+.+|+++++.++|+|+     +++++++.+.+.
T Consensus         3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~   77 (333)
T cd06650           3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI-----VGFYGAFYSDGE   77 (333)
T ss_pred             chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcc-----cceeEEEEECCE
Confidence            457899999999999999999999999999999988743  3345678899999999999888     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      +|+||||+ +++|.+++....  .+++..+..++.|++.||.|||+. +|+|+||||+|||++.++.+||+|||++....
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~  155 (333)
T cd06650          78 ISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  155 (333)
T ss_pred             EEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhh
Confidence            99999999 899999998765  689999999999999999999975 79999999999999999999999999987532


Q ss_pred             ----CCcccceeeeeceeEee
Q 024661          246 ----AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ----~~~~~~~~y~ape~~~~  262 (264)
                          ....++..|+|||++.+
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~~  176 (333)
T cd06650         156 DSMANSFVGTRSYMSPERLQG  176 (333)
T ss_pred             hhccccCCCCccccCHHHhcC
Confidence                23357889999998754

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.97  E-value=3.3e-31  Score=223.73  Aligned_cols=158  Identities=22%  Similarity=0.356  Sum_probs=132.8

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHH-HHHHHhccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEID-VLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~-~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      +.||+|+||+||+|.+..+++.+|+|++.+..    .....+..|.. +++.+.|+++     +++++.+...+.+|+||
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~I-----v~~~~~~~~~~~~~lv~   75 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFL-----VGLHFSFQTADKLYFVL   75 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCC-----CceeEEEEcCCeEEEEE
Confidence            46999999999999999999999999997532    12223333433 4566777777     99999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC------
Q 024661          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH------  245 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~------  245 (264)
                      ||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++....      
T Consensus        76 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~  153 (325)
T cd05602          76 DYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTT  153 (325)
T ss_pred             eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCc
Confidence            999 899999998754  68899999999999999999999999999999999999999999999999987421      


Q ss_pred             CCcccceeeeeceeEee
Q 024661          246 AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~~~~~~~~y~ape~~~~  262 (264)
                      ....+|..|||||++.+
T Consensus       154 ~~~~gt~~y~aPE~~~~  170 (325)
T cd05602         154 STFCGTPEYLAPEVLHK  170 (325)
T ss_pred             ccccCCccccCHHHHcC
Confidence            22357889999998653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=5.3e-31  Score=218.51  Aligned_cols=165  Identities=21%  Similarity=0.304  Sum_probs=143.5

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      .|++.+.||+|+||.||++.+..+++.||+|++....    .....+.+|+.+++.++|+++     +.+++.+.+++.+
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~   75 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFV-----VSLAYAYETKDAL   75 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCE-----eeeeeeecCCCeE
Confidence            3889999999999999999999999999999987432    223456789999999999887     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-  246 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-  246 (264)
                      |+||||+ +++|.+++.......+++..+..++.|++.||.|||+.|++|+||||+||++++++.++|+|||++..... 
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~  155 (285)
T cd05605          76 CLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG  155 (285)
T ss_pred             EEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence            9999999 89999988765445699999999999999999999999999999999999999999999999999875322 


Q ss_pred             ----CcccceeeeeceeEee
Q 024661          247 ----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ----~~~~~~~y~ape~~~~  262 (264)
                          ...++..||+||++.+
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~  175 (285)
T cd05605         156 ETIRGRVGTVGYMAPEVVKN  175 (285)
T ss_pred             CccccccCCCCccCcHHhcC
Confidence                2357788999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.97  E-value=4.7e-34  Score=219.83  Aligned_cols=167  Identities=22%  Similarity=0.339  Sum_probs=147.8

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ..+.+.|++.++||+|.|+.|+++.+..+|+.+|+|+++..   ....+.+.+|+++.+.++||+|     +++.+.+..
T Consensus         7 ~~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~I-----vrL~~ti~~   81 (355)
T KOG0033|consen    7 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI-----VRLHDSIQE   81 (355)
T ss_pred             cccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcE-----eehhhhhcc
Confidence            35667899999999999999999999999999999988743   2356788999999999999998     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC---cEEeccCCC
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE---YVKVPDYKV  240 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~---~v~l~Dfg~  240 (264)
                      +.+.|||+|++ |++|..-+-+.-  .++|..+-.+++||+++|.|+|.+||||||+||+|+|+.+..   -+||+|||+
T Consensus        82 ~~~~ylvFe~m~G~dl~~eIV~R~--~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGv  159 (355)
T KOG0033|consen   82 ESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGL  159 (355)
T ss_pred             cceeEEEEecccchHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccce
Confidence            99999999999 999887766553  689999999999999999999999999999999999998653   699999999


Q ss_pred             CCcCCCC-----cccceeeeeceeEe
Q 024661          241 PSPRHAF-----SFQTFLSMASRVYI  261 (264)
Q Consensus       241 a~~~~~~-----~~~~~~y~ape~~~  261 (264)
                      |......     ..||+.|||||+++
T Consensus       160 Ai~l~~g~~~~G~~GtP~fmaPEvvr  185 (355)
T KOG0033|consen  160 AIEVNDGEAWHGFAGTPGYLSPEVLK  185 (355)
T ss_pred             EEEeCCccccccccCCCcccCHHHhh
Confidence            9876642     25899999999864

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.97  E-value=4.2e-31  Score=222.93  Aligned_cols=158  Identities=23%  Similarity=0.332  Sum_probs=136.9

Q ss_pred             eecccCccEEEEEEEeC---CCCcEEEEEEEechh-----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           98 SKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      +.||+|+||.||++.+.   .+++.||+|++++..     .....+.+|+.+++.++|+|+     +++++.+..++.+|
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i-----v~~~~~~~~~~~~~   76 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFI-----VDLIYAFQTGGKLY   76 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCch-----hceeeEEecCCeEE
Confidence            67999999999999864   468899999997532     233456789999999999888     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC---
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH---  245 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~---  245 (264)
                      +||||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++....   
T Consensus        77 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  154 (323)
T cd05584          77 LILEYLSGGELFMHLEREG--IFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG  154 (323)
T ss_pred             EEEeCCCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence            999999 899999998765  68899999999999999999999999999999999999999999999999986421   


Q ss_pred             ---CCcccceeeeeceeEee
Q 024661          246 ---AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ---~~~~~~~~y~ape~~~~  262 (264)
                         ....++..|||||++.+
T Consensus       155 ~~~~~~~gt~~y~aPE~~~~  174 (323)
T cd05584         155 TVTHTFCGTIEYMAPEILMR  174 (323)
T ss_pred             CcccccCCCccccChhhccC
Confidence               12357889999998754

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.97  E-value=3.2e-31  Score=223.35  Aligned_cols=158  Identities=22%  Similarity=0.278  Sum_probs=136.0

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      +.||+|+||.||+|.++.+++.||+|++.+..    .....+..|..+++.+ .|+++     +++++++.+.+.+|+||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i-----v~~~~~~~~~~~~~iv~   75 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFL-----TQLYCCFQTPDRLFFVM   75 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCch-----hceeeEEEcCCEEEEEE
Confidence            36899999999999999999999999987532    2344566788887766 46666     99999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC------
Q 024661          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH------  245 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~------  245 (264)
                      ||+ +++|.+++....  .+++..++.++.|++.||+|||++||+||||||+|||++.++.++|+|||++....      
T Consensus        76 Ey~~~g~L~~~i~~~~--~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~  153 (320)
T cd05590          76 EFVNGGDLMFHIQKSR--RFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTT  153 (320)
T ss_pred             cCCCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcc
Confidence            999 899999988765  79999999999999999999999999999999999999999999999999986421      


Q ss_pred             CCcccceeeeeceeEee
Q 024661          246 AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~~~~~~~~y~ape~~~~  262 (264)
                      ....+|..|||||++..
T Consensus       154 ~~~~gt~~y~aPE~~~~  170 (320)
T cd05590         154 STFCGTPDYIAPEILQE  170 (320)
T ss_pred             cccccCccccCHHHHcC
Confidence            23357889999998653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=3.2e-31  Score=235.43  Aligned_cols=174  Identities=21%  Similarity=0.334  Sum_probs=138.2

Q ss_pred             EeeCCccCCCeEEEeecccCccEEEEEEEeCCCC-cEEEEE------------------EEechhhhHHHHHHHHHHHHH
Q 024661           84 FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKK-ELVAIK------------------IVRSINKYREAAMIEIDVLQR  144 (264)
Q Consensus        84 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~vaiK------------------~~~~~~~~~~~~~~e~~~l~~  144 (264)
                      +..++.+.++|+++++||+|+||+||+|..+... +..+.|                  .+.........+.+|+.+++.
T Consensus       140 ~~~~~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~  219 (501)
T PHA03210        140 LKHDDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGR  219 (501)
T ss_pred             cccchhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHh
Confidence            3445566789999999999999999998764332 111212                  122222344567889999999


Q ss_pred             HhccCCCCcceEEEceeeeeCCEEEEEEecCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Q 024661          145 LARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNS---YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK  221 (264)
Q Consensus       145 l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dik  221 (264)
                      ++|+|+     +++++++.+.+..|+++++++++|.+++....   ........++.++.||+.||+|||++||+|||||
T Consensus       220 l~HpnI-----v~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLK  294 (501)
T PHA03210        220 LNHENI-----LKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIK  294 (501)
T ss_pred             CCCCCc-----CcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            999988     99999999999999999999889998876432   1123466788899999999999999999999999


Q ss_pred             CCCEEeecCCcEEeccCCCCCcCCC-------CcccceeeeeceeEee
Q 024661          222 PENILLVSAEYVKVPDYKVPSPRHA-------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       222 p~Nili~~~~~v~l~Dfg~a~~~~~-------~~~~~~~y~ape~~~~  262 (264)
                      |+|||++.++.+||+|||++.....       ...||..|+|||++.+
T Consensus       295 P~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~  342 (501)
T PHA03210        295 LENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAG  342 (501)
T ss_pred             HHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcC
Confidence            9999999999999999999975332       2358899999998754

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.97  E-value=4.8e-31  Score=221.87  Aligned_cols=158  Identities=23%  Similarity=0.299  Sum_probs=133.8

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      +.||+|+||.||+|.+..+++.||+|+++...    ...+....|..++..+ .|+++     +++++++...+.+|+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i-----~~~~~~~~~~~~~~lv~   75 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFL-----THLFCTFQTKEHLFFVM   75 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCc-----cceeeEEEcCCEEEEEE
Confidence            36999999999999999999999999998542    2233445566666543 56666     99999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC------
Q 024661          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH------  245 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~------  245 (264)
                      ||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....      
T Consensus        76 e~~~gg~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~  153 (316)
T cd05592          76 EYLNGGDLMFHIQSSG--RFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKA  153 (316)
T ss_pred             cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcc
Confidence            999 999999998755  79999999999999999999999999999999999999999999999999986432      


Q ss_pred             CCcccceeeeeceeEee
Q 024661          246 AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~~~~~~~~y~ape~~~~  262 (264)
                      ....+|..|||||++.+
T Consensus       154 ~~~~gt~~y~aPE~~~~  170 (316)
T cd05592         154 STFCGTPDYIAPEILKG  170 (316)
T ss_pred             ccccCCccccCHHHHcC
Confidence            22357889999998653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.97  E-value=6.1e-31  Score=221.77  Aligned_cols=158  Identities=24%  Similarity=0.352  Sum_probs=133.8

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHH-HHHHHhccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEID-VLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~-~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      +.||+|+||.||+|++..+++.+|+|++.+..    .....+..|.. +++.+.|+|+     +++++.+.+.+..|+||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~i-----v~~~~~~~~~~~~~lv~   75 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFL-----VGLHYSFQTAEKLYFVL   75 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCc-----cceeeEEEcCCEEEEEE
Confidence            46999999999999999999999999987532    22334444543 5677888877     99999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC------
Q 024661          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH------  245 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~------  245 (264)
                      ||+ +++|...+....  .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....      
T Consensus        76 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~  153 (321)
T cd05603          76 DYVNGGELFFHLQRER--CFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETT  153 (321)
T ss_pred             cCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcc
Confidence            999 899998887654  78999999999999999999999999999999999999999999999999987521      


Q ss_pred             CCcccceeeeeceeEee
Q 024661          246 AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~~~~~~~~y~ape~~~~  262 (264)
                      ....++..|+|||++.+
T Consensus       154 ~~~~gt~~y~aPE~~~~  170 (321)
T cd05603         154 STFCGTPEYLAPEVLRK  170 (321)
T ss_pred             ccccCCcccCCHHHhcC
Confidence            12347889999998753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.97  E-value=6.7e-31  Score=221.69  Aligned_cols=158  Identities=25%  Similarity=0.376  Sum_probs=133.5

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHH-HHHHHhccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEID-VLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~-~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      +.||+|+||+||+|.+..+|+.||+|++.+..    .....+..|.. +++.+.|+++     +++++.+.+.+.+|+||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~i-----v~~~~~~~~~~~~~lv~   75 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFL-----VGLHYSFQTADKLYFVL   75 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCC-----CCeeEEEEeCCEEEEEE
Confidence            46999999999999999999999999997532    12233444444 4566777777     99999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC------
Q 024661          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH------  245 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~------  245 (264)
                      ||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....      
T Consensus        76 e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~  153 (323)
T cd05575          76 DYVNGGELFFHLQRER--SFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTT  153 (323)
T ss_pred             cCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcc
Confidence            999 999999998755  78999999999999999999999999999999999999999999999999986421      


Q ss_pred             CCcccceeeeeceeEee
Q 024661          246 AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~~~~~~~~y~ape~~~~  262 (264)
                      ....+|..|||||++..
T Consensus       154 ~~~~gt~~y~aPE~~~~  170 (323)
T cd05575         154 STFCGTPEYLAPEVLRK  170 (323)
T ss_pred             ccccCChhhcChhhhcC
Confidence            12347889999998653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.97  E-value=9.2e-31  Score=219.48  Aligned_cols=164  Identities=24%  Similarity=0.407  Sum_probs=143.4

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      ++|.+.++||+|+||.||+|.+..+++.+|+|.++...  .....+.+|+.+++.++|+|+     +++++++..++..|
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~   80 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI-----VTLHDIVHTDKSLT   80 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCc-----ceEEEEEeeCCeEE
Confidence            57999999999999999999999999999999987432  233466789999999999888     99999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC----
Q 024661          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH----  245 (264)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~----  245 (264)
                      +||||+.++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++....    
T Consensus        81 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~  159 (309)
T cd07872          81 LVFEYLDKDLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK  159 (309)
T ss_pred             EEEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence            999999889999887654 358899999999999999999999999999999999999999999999999986532    


Q ss_pred             --CCcccceeeeeceeEe
Q 024661          246 --AFSFQTFLSMASRVYI  261 (264)
Q Consensus       246 --~~~~~~~~y~ape~~~  261 (264)
                        ....++..|+|||++.
T Consensus       160 ~~~~~~~~~~y~aPE~~~  177 (309)
T cd07872         160 TYSNEVVTLWYRPPDVLL  177 (309)
T ss_pred             ccccccccccccCCHHHh
Confidence              1234678899999864

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.97  E-value=7.1e-31  Score=221.71  Aligned_cols=158  Identities=23%  Similarity=0.345  Sum_probs=133.8

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHH-HHHHHhccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEID-VLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~-~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      +.||+|+||.||+|.+..+|+.+|+|++.+..    .....+..|.. +++.+.|+|+     +++++.+..++.+|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~i-----v~~~~~~~~~~~~~lv~   75 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFL-----VGLHYSFQTTEKLYFVL   75 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCC-----ccEEEEEecCCEEEEEE
Confidence            46999999999999999999999999997532    22334444544 4566778777     99999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC------
Q 024661          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH------  245 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~------  245 (264)
                      ||+ +++|..++....  .+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++....      
T Consensus        76 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~  153 (325)
T cd05604          76 DFVNGGELFFHLQRER--SFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTT  153 (325)
T ss_pred             cCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCc
Confidence            999 899999887654  79999999999999999999999999999999999999999999999999987532      


Q ss_pred             CCcccceeeeeceeEee
Q 024661          246 AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~~~~~~~~y~ape~~~~  262 (264)
                      ....++..|||||++.+
T Consensus       154 ~~~~gt~~y~aPE~~~~  170 (325)
T cd05604         154 TTFCGTPEYLAPEVIRK  170 (325)
T ss_pred             ccccCChhhCCHHHHcC
Confidence            12347889999998653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.97  E-value=1.4e-31  Score=227.40  Aligned_cols=164  Identities=22%  Similarity=0.349  Sum_probs=146.3

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHH---------HHHHHHHHHh---ccCCCCcceEEEc
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAM---------IEIDVLQRLA---RHDIGGTRCVQIR  159 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~---------~e~~~l~~l~---~~~~~~~~~~~~~  159 (264)
                      ..|..++.+|+|+||.|++|.++....+|+||.+.++.-..+.+.         .|+++|..++   |+||     ++++
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NI-----lKlL  635 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENI-----LKLL  635 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccch-----hhhh
Confidence            459999999999999999999999999999999987654333333         4999999998   6666     9999


Q ss_pred             eeeeeCCEEEEEEecC--CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEecc
Q 024661          160 NWFDYRNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  237 (264)
Q Consensus       160 ~~~~~~~~~~lv~e~~--~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~D  237 (264)
                      ++|++++++||+||--  +.+|++++....  +++|.++..|+.|++.|+++||++||||||||-+|++++.+|-+||+|
T Consensus       636 dfFEddd~yyl~te~hg~gIDLFd~IE~kp--~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klid  713 (772)
T KOG1152|consen  636 DFFEDDDYYYLETEVHGEGIDLFDFIEFKP--RMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLID  713 (772)
T ss_pred             heeecCCeeEEEecCCCCCcchhhhhhccC--ccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEee
Confidence            9999999999999999  679999999877  899999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcCCCC----cccceeeeeceeEee
Q 024661          238 YKVPSPRHAF----SFQTFLSMASRVYIC  262 (264)
Q Consensus       238 fg~a~~~~~~----~~~~~~y~ape~~~~  262 (264)
                      ||.|......    ..||..|.|||++.+
T Consensus       714 fgsaa~~ksgpfd~f~gtv~~aapevl~g  742 (772)
T KOG1152|consen  714 FGSAAYTKSGPFDVFVGTVDYAAPEVLGG  742 (772)
T ss_pred             ccchhhhcCCCcceeeeeccccchhhhCC
Confidence            9999765442    348999999999875

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.97  E-value=7.9e-31  Score=221.62  Aligned_cols=158  Identities=20%  Similarity=0.291  Sum_probs=137.0

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHh-ccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      +.||+|+||.||+|.+..+++.+|+|++++..    ...+.+.+|+.++..+. |+++     +.+++++.+.+.+|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i-----~~~~~~~~~~~~~~lv~   75 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFL-----VGLHSCFQTTSRLFLVI   75 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCE-----eeEEEEEEeCCEEEEEE
Confidence            46999999999999999999999999998542    23455778888888874 5555     99999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC------
Q 024661          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH------  245 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~------  245 (264)
                      ||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++....      
T Consensus        76 e~~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~  153 (327)
T cd05617          76 EYVNGGDLMFHMQRQR--KLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTT  153 (327)
T ss_pred             eCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCce
Confidence            999 999999887654  79999999999999999999999999999999999999999999999999987421      


Q ss_pred             CCcccceeeeeceeEee
Q 024661          246 AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~~~~~~~~y~ape~~~~  262 (264)
                      ....+|..|||||++.+
T Consensus       154 ~~~~gt~~y~aPE~~~~  170 (327)
T cd05617         154 STFCGTPNYIAPEILRG  170 (327)
T ss_pred             ecccCCcccCCHHHHCC
Confidence            12357889999998753

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.97  E-value=1e-30  Score=231.28  Aligned_cols=166  Identities=19%  Similarity=0.204  Sum_probs=143.2

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCC-CcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      ..|.+.+.||+|++|.||+|....+ ++.+++|.+... ......+.+|+.+++.++|+|+     +++++++...+.+|
T Consensus        67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpni-----v~~~~~~~~~~~~~  141 (478)
T PTZ00267         67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGI-----VKHFDDFKSDDKLL  141 (478)
T ss_pred             eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCE-----eEEEEEEEECCEEE
Confidence            3499999999999999999998877 788899976533 3344567789999999999988     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          170 IVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      |||||+ +++|.+++...  ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus       142 lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~  221 (478)
T PTZ00267        142 LIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSD  221 (478)
T ss_pred             EEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCC
Confidence            999999 99999988642  223689999999999999999999999999999999999999999999999999975432


Q ss_pred             --------CcccceeeeeceeEee
Q 024661          247 --------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 --------~~~~~~~y~ape~~~~  262 (264)
                              ...||..|||||++.+
T Consensus       222 ~~~~~~~~~~~gt~~y~aPE~~~~  245 (478)
T PTZ00267        222 SVSLDVASSFCGTPYYLAPELWER  245 (478)
T ss_pred             ccccccccccCCCccccCHhHhCC
Confidence                    2348889999998653

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=9.4e-31  Score=223.67  Aligned_cols=160  Identities=24%  Similarity=0.385  Sum_probs=140.8

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      .+|++.+.||+|+||.||+|.+..+++.||+|+....     ....|+.+++.+.|+|+     +++++++...+..|+|
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~lv  135 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVNHPSV-----IRMKDTLVSGAITCMV  135 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCCCCCC-----cChhheEEeCCeeEEE
Confidence            4699999999999999999999999999999975432     23458999999999888     9999999999999999


Q ss_pred             EecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-----
Q 024661          172 FEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-----  246 (264)
Q Consensus       172 ~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-----  246 (264)
                      ||++.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++.....     
T Consensus       136 ~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~  214 (357)
T PHA03209        136 LPHYSSDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFL  214 (357)
T ss_pred             EEccCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCcccc
Confidence            9999889999987643 4689999999999999999999999999999999999999999999999999975321     


Q ss_pred             CcccceeeeeceeEee
Q 024661          247 FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ~~~~~~~y~ape~~~~  262 (264)
                      ...+|..|+|||++..
T Consensus       215 ~~~gt~~y~aPE~~~~  230 (357)
T PHA03209        215 GLAGTVETNAPEVLAR  230 (357)
T ss_pred             cccccccccCCeecCC
Confidence            2347889999998753

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.97  E-value=6.9e-31  Score=220.93  Aligned_cols=157  Identities=21%  Similarity=0.297  Sum_probs=134.5

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      +.||+|+||.||+|.+..+++.||+|+++...    ........|..+++.. .|+++     +++++++.+.+.+|+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i-----v~~~~~~~~~~~~~lv~   75 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL-----THLYCTFQTKENLFFVM   75 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcC-----cceEEEEEeCCEEEEEE
Confidence            46999999999999999999999999998542    2334556677777654 67776     99999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC------
Q 024661          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH------  245 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~------  245 (264)
                      ||+ +++|.+++....  .+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++....      
T Consensus        76 ey~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  153 (316)
T cd05619          76 EYLNGGDLMFHIQSCH--KFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKT  153 (316)
T ss_pred             eCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCce
Confidence            999 999999998754  68999999999999999999999999999999999999999999999999986422      


Q ss_pred             CCcccceeeeeceeEe
Q 024661          246 AFSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ~~~~~~~~y~ape~~~  261 (264)
                      ....+|..|||||++.
T Consensus       154 ~~~~gt~~y~aPE~~~  169 (316)
T cd05619         154 CTFCGTPDYIAPEILL  169 (316)
T ss_pred             eeecCCccccCHHHHc
Confidence            1234788999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.97  E-value=1.4e-30  Score=228.00  Aligned_cols=166  Identities=22%  Similarity=0.345  Sum_probs=137.7

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee----
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY----  164 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~----  164 (264)
                      ....+|++++.||+|+||.||+|.+..+++.||+|.+.....   ...+|+.+++.+.|+|+     +++++++..    
T Consensus        63 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~---~~~~Ei~il~~l~h~ni-----v~l~~~~~~~~~~  134 (440)
T PTZ00036         63 SPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQ---YKNRELLIMKNLNHINI-----IFLKDYYYTECFK  134 (440)
T ss_pred             CcCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHhcCCCCC-----cceeeeEeecccc
Confidence            345679999999999999999999999999999998864332   33569999999999998     888776643    


Q ss_pred             ----CCEEEEEEecCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC-cEEecc
Q 024661          165 ----RNHICIVFEKLGPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE-YVKVPD  237 (264)
Q Consensus       165 ----~~~~~lv~e~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~-~v~l~D  237 (264)
                          ...+++||||++++|.+++...  ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus       135 ~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~D  214 (440)
T PTZ00036        135 KNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCD  214 (440)
T ss_pred             cCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeec
Confidence                2357899999988898887632  234689999999999999999999999999999999999999665 799999


Q ss_pred             CCCCCcCCC-----CcccceeeeeceeEee
Q 024661          238 YKVPSPRHA-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       238 fg~a~~~~~-----~~~~~~~y~ape~~~~  262 (264)
                      ||+|+....     ...++..|||||++.+
T Consensus       215 FGla~~~~~~~~~~~~~~t~~y~aPE~~~~  244 (440)
T PTZ00036        215 FGSAKNLLAGQRSVSYICSRFYRAPELMLG  244 (440)
T ss_pred             cccchhccCCCCcccCCCCcCccCHHHhcC
Confidence            999975322     3357888999998754

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.97  E-value=7e-31  Score=221.11  Aligned_cols=157  Identities=26%  Similarity=0.378  Sum_probs=136.8

Q ss_pred             eecccCccEEEEEEEe---CCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEE
Q 024661           98 SKMGEGTFGQVVECFD---NEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~---~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      +.||+|+||.||++.+   ..+|+.+|+|++.+..   .....+..|+++++.+.|+|+     +++++.+.+.+.+|+|
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~~~lv   76 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFI-----VKLHYAFQTEGKLYLI   76 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCc-----ccEEEEEEcCCEEEEE
Confidence            5799999999999986   3578999999998533   234456789999999999888     9999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC----
Q 024661          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA----  246 (264)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~----  246 (264)
                      |||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++.....    
T Consensus        77 ~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~  154 (318)
T cd05582          77 LDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK  154 (318)
T ss_pred             EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCc
Confidence            9999 899999997654  689999999999999999999999999999999999999999999999999875322    


Q ss_pred             --CcccceeeeeceeEe
Q 024661          247 --FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 --~~~~~~~y~ape~~~  261 (264)
                        ...++..|||||++.
T Consensus       155 ~~~~~g~~~y~aPE~~~  171 (318)
T cd05582         155 AYSFCGTVEYMAPEVVN  171 (318)
T ss_pred             eecccCChhhcCHHHHc
Confidence              234788899999864

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.97  E-value=8.3e-31  Score=223.89  Aligned_cols=165  Identities=23%  Similarity=0.329  Sum_probs=142.0

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .+.++|++.+.||+|+||.||+|.+..+++.+|+|.+...   ......+.+|+.+++.++|+|+     +++++++...
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~   88 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI-----ISLLNVFTPQ   88 (355)
T ss_pred             hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCch-----hceeeeeecc
Confidence            3568899999999999999999999999999999998642   2344677789999999999988     8888887543


Q ss_pred             ------CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          166 ------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       166 ------~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                            ..+|+||||+.++|.+.+..    .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||
T Consensus        89 ~~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg  164 (355)
T cd07874          89 KSLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG  164 (355)
T ss_pred             ccccccceeEEEhhhhcccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCc
Confidence                  35799999998888887754    48899999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCC-----CcccceeeeeceeEee
Q 024661          240 VPSPRHA-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       240 ~a~~~~~-----~~~~~~~y~ape~~~~  262 (264)
                      +++....     ...+|..|+|||++.+
T Consensus       165 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~  192 (355)
T cd07874         165 LARTAGTSFMMTPYVVTRYYRAPEVILG  192 (355)
T ss_pred             ccccCCCccccCCccccCCccCHHHHcC
Confidence            9976433     2357889999998754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.1e-30  Score=220.94  Aligned_cols=155  Identities=24%  Similarity=0.354  Sum_probs=131.3

Q ss_pred             cccCccEEEEEEEeCCCCcEEEEEEEechhh----hHHHHHHHHHHHHHH---hccCCCCcceEEEceeeeeCCEEEEEE
Q 024661          100 MGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRL---ARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus       100 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l---~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      ||+|+||+||+|++..+++.||+|++.+...    .......|..++...   .|+++     +.+++.+.+.+.+|+||
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i-----~~~~~~~~~~~~~~lv~   75 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFI-----VGLKFSFQTDSDLYLVT   75 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcC-----cceEEEEecCCeEEEEE
Confidence            7999999999999999999999999875321    223344566666655   35555     99999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC------
Q 024661          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH------  245 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~------  245 (264)
                      ||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||++....      
T Consensus        76 e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~  153 (330)
T cd05586          76 DYMSGGELFWHLQKEG--RFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTT  153 (330)
T ss_pred             cCCCCChHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCc
Confidence            999 899999988754  79999999999999999999999999999999999999999999999999986521      


Q ss_pred             CCcccceeeeeceeEe
Q 024661          246 AFSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ~~~~~~~~y~ape~~~  261 (264)
                      ....+|..|||||++.
T Consensus       154 ~~~~gt~~y~aPE~~~  169 (330)
T cd05586         154 NTFCGTTEYLAPEVLL  169 (330)
T ss_pred             cCccCCccccCHHHHc
Confidence            1235788999999864

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.97  E-value=3.7e-33  Score=220.94  Aligned_cols=161  Identities=25%  Similarity=0.404  Sum_probs=146.5

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      -|.++++||+|+||.||+|.++.+|..+|||.+.. ....+.+..|+.+++++..+.+     |++|+.|.....+|+||
T Consensus        34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV-~sDLQEIIKEISIMQQC~S~yV-----VKYYGSYFK~sDLWIVM  107 (502)
T KOG0574|consen   34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV-DTDLQEIIKEISIMQQCKSKYV-----VKYYGSYFKHSDLWIVM  107 (502)
T ss_pred             HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc-cchHHHHHHHHHHHHHcCCchh-----hhhhhhhccCCceEeeh
Confidence            38889999999999999999999999999998764 4456788899999999998877     99999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC------C
Q 024661          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR------H  245 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~------~  245 (264)
                      ||| .|++.++++.+. ..+++.++..+++..+.||+|||...-+|||||..|||++.+|..||+|||.|-..      .
T Consensus       108 EYCGAGSiSDI~R~R~-K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKR  186 (502)
T KOG0574|consen  108 EYCGAGSISDIMRARR-KPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKR  186 (502)
T ss_pred             hhcCCCcHHHHHHHhc-CCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhh
Confidence            999 799999998654 58999999999999999999999999999999999999999999999999999653      3


Q ss_pred             CCcccceeeeeceeE
Q 024661          246 AFSFQTFLSMASRVY  260 (264)
Q Consensus       246 ~~~~~~~~y~ape~~  260 (264)
                      ....||+.|||||++
T Consensus       187 NTVIGTPFWMAPEVI  201 (502)
T KOG0574|consen  187 NTVIGTPFWMAPEVI  201 (502)
T ss_pred             CccccCcccccHHHH
Confidence            456799999999985

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.3e-32  Score=219.86  Aligned_cols=164  Identities=25%  Similarity=0.395  Sum_probs=146.4

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|..+++||.|.||+|-+|+.+.+++.+|+|++++.-    ........|-++|+...||.+     ..+...|+..+.
T Consensus       168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFL-----t~LKYsFQt~dr  242 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFL-----TSLKYSFQTQDR  242 (516)
T ss_pred             chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHH-----HHhhhhhccCce
Confidence            56999999999999999999999999999999988642    334455678889999999876     888888999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc---
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP---  243 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~---  243 (264)
                      +|+||||. ||.|+-.+....  .|++..++.+..+|+.||.|||+++||.||||.+|+|+|.+|++||+|||++..   
T Consensus       243 lCFVMeyanGGeLf~HLsrer--~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~  320 (516)
T KOG0690|consen  243 LCFVMEYANGGELFFHLSRER--VFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK  320 (516)
T ss_pred             EEEEEEEccCceEeeehhhhh--cccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhccc
Confidence            99999999 999998888765  899999999999999999999999999999999999999999999999999975   


Q ss_pred             ---CCCCcccceeeeeceeEee
Q 024661          244 ---RHAFSFQTFLSMASRVYIC  262 (264)
Q Consensus       244 ---~~~~~~~~~~y~ape~~~~  262 (264)
                         .....|||+.|+|||++--
T Consensus       321 ~g~t~kTFCGTPEYLAPEVleD  342 (516)
T KOG0690|consen  321 YGDTTKTFCGTPEYLAPEVLED  342 (516)
T ss_pred             ccceeccccCChhhcCchhhcc
Confidence               2345689999999999743

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.97  E-value=1.1e-30  Score=216.89  Aligned_cols=165  Identities=27%  Similarity=0.464  Sum_probs=136.9

Q ss_pred             CCeEEEeecccCccEEEEEEEeCC-CCcEEEEEEEechh---hhHHHHHHHHHHHHHH---hccCCCCcceEEEceeee-
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSIN---KYREAAMIEIDVLQRL---ARHDIGGTRCVQIRNWFD-  163 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l---~~~~~~~~~~~~~~~~~~-  163 (264)
                      ++|++.+.||+|+||.||+|.+.. ++..+|+|.++...   .......+|+.+++.+   .|+|+     +++++++. 
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpni-----v~~~~~~~~   75 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV-----VRLFDVCTV   75 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCc-----ceEEEEEec
Confidence            369999999999999999999865 46889999887432   2234566788877776   46666     99988875 


Q ss_pred             ----eCCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          164 ----YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       164 ----~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                          ....+++|||+++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||
T Consensus        76 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg  155 (290)
T cd07862          76 SRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG  155 (290)
T ss_pred             ccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEcccc
Confidence                3467999999998899999987654568999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCC-----CcccceeeeeceeEe
Q 024661          240 VPSPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       240 ~a~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      ++.....     ...++..|+|||++.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~  182 (290)
T cd07862         156 LARIYSFQMALTSVVVTLWYRAPEVLL  182 (290)
T ss_pred             ceEeccCCcccccccccccccChHHHh
Confidence            9875432     234788899999764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.97  E-value=6.1e-31  Score=226.10  Aligned_cols=163  Identities=19%  Similarity=0.273  Sum_probs=141.8

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC---
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN---  166 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~---  166 (264)
                      .|++.+.||+|+||.||+|.+..+++.||+|.+...   ......+.+|+++++.++|+|+     +++++++...+   
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~~~   75 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNV-----LSALDILQPPHIDP   75 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCc-----CCHhheecCCCccc
Confidence            378899999999999999999999999999988642   2334577889999999999988     99999988766   


Q ss_pred             --EEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          167 --HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       167 --~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                        ..|+||||++++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus        76 ~~~~~lv~e~~~~~l~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~  153 (372)
T cd07853          76 FEEIYVVTELMQSDLHKIIVSPQ--PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVE  153 (372)
T ss_pred             cceEEEEeeccccCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeec
Confidence              899999999889999887654  7999999999999999999999999999999999999999999999999998753


Q ss_pred             CC-------CcccceeeeeceeEee
Q 024661          245 HA-------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       245 ~~-------~~~~~~~y~ape~~~~  262 (264)
                      ..       ...++..|+|||++.+
T Consensus       154 ~~~~~~~~~~~~~~~~y~aPE~~~~  178 (372)
T cd07853         154 EPDESKHMTQEVVTQYYRAPEILMG  178 (372)
T ss_pred             ccCccccCCCCCcCCCcCCHHHHcC
Confidence            22       2246778999998754

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.4e-31  Score=223.76  Aligned_cols=168  Identities=21%  Similarity=0.388  Sum_probs=152.4

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .+.+-|.+.+.||+|.|..|.+|++.-+|+.||||++.+.+   .....+..|++.++-++|+|+     |++|++....
T Consensus        15 kIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNi-----VRLYEViDTQ   89 (864)
T KOG4717|consen   15 KIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNI-----VRLYEVIDTQ   89 (864)
T ss_pred             ceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCe-----eeeeehhccc
Confidence            45567999999999999999999999999999999998654   345678899999999999999     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec-CCcEEeccCCCCCc
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS-AEYVKVPDYKVPSP  243 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~-~~~v~l~Dfg~a~~  243 (264)
                      ..+|||+|+- +|+|++|+-++. ..++|+.+..|+.||+.|+.|+|...+|||||||+|+++.+ -|-|||+|||++..
T Consensus        90 TKlyLiLELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNk  168 (864)
T KOG4717|consen   90 TKLYLILELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNK  168 (864)
T ss_pred             ceEEEEEEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeecccccc
Confidence            9999999999 899999999876 57999999999999999999999999999999999998775 58999999999987


Q ss_pred             CCC-----CcccceeeeeceeEee
Q 024661          244 RHA-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       244 ~~~-----~~~~~~~y~ape~~~~  262 (264)
                      ..+     ..+|...|-|||++++
T Consensus       169 f~PG~kL~TsCGSLAYSAPEILLG  192 (864)
T KOG4717|consen  169 FQPGKKLTTSCGSLAYSAPEILLG  192 (864)
T ss_pred             CCCcchhhcccchhhccCchhhhc
Confidence            554     5578889999999876

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=5e-30  Score=221.77  Aligned_cols=165  Identities=24%  Similarity=0.450  Sum_probs=142.1

Q ss_pred             CCccCCCeEEEeecccCccEEEEEEEeC--CCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           87 GENLTPRYRILSKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ...+..+|.+.+.||.|+||.||+|...  .++..|++|.+...    ....+|+++++.++|+++     +++++.+..
T Consensus        87 ~~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~h~~i-----v~~~~~~~~  157 (392)
T PHA03207         87 ASVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTISHRAI-----INLIHAYRW  157 (392)
T ss_pred             chhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcCCCCc-----cceeeeEee
Confidence            3455678999999999999999999764  34678999987643    234579999999999988     999999999


Q ss_pred             CCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          165 RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       165 ~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      ...+|++||+++++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||++...
T Consensus       158 ~~~~~lv~e~~~~~l~~~l~~~~--~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~  235 (392)
T PHA03207        158 KSTVCMVMPKYKCDLFTYVDRSG--PLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKL  235 (392)
T ss_pred             CCEEEEEehhcCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCcccccc
Confidence            99999999999889999996544  7999999999999999999999999999999999999999999999999998653


Q ss_pred             CC--------CcccceeeeeceeEee
Q 024661          245 HA--------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       245 ~~--------~~~~~~~y~ape~~~~  262 (264)
                      ..        ...+|..|+|||++.+
T Consensus       236 ~~~~~~~~~~~~~gt~~y~aPE~~~~  261 (392)
T PHA03207        236 DAHPDTPQCYGWSGTLETNSPELLAL  261 (392)
T ss_pred             CcccccccccccccccCccCHhHhcC
Confidence            32        2357889999998753

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.97  E-value=1.4e-30  Score=215.49  Aligned_cols=158  Identities=25%  Similarity=0.340  Sum_probs=135.8

Q ss_pred             cccCccEEEEEEEeCCCCcEEEEEEEechhh----hHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC
Q 024661          100 MGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (264)
Q Consensus       100 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  175 (264)
                      ||+|+||+||++.+..+++.+|+|.+.+...    ..+.+..|+.+++.++|+++     +.+.+++..+..+|+||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i-----~~~~~~~~~~~~~~lv~e~~   75 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFI-----VSLAYAFQTKTDLCLVMTIM   75 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcE-----eeeeEEEcCCCeEEEEEeCC
Confidence            7999999999999999999999999874322    23456789999999988877     99999999999999999999


Q ss_pred             -CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC------
Q 024661          176 -GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA------  246 (264)
Q Consensus       176 -~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~------  246 (264)
                       +++|.+++...  ....+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++.....      
T Consensus        76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~  155 (280)
T cd05608          76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTK  155 (280)
T ss_pred             CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccc
Confidence             89998887532  224689999999999999999999999999999999999999999999999999865332      


Q ss_pred             CcccceeeeeceeEee
Q 024661          247 FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ~~~~~~~y~ape~~~~  262 (264)
                      ...++..|||||++.+
T Consensus       156 ~~~g~~~y~aPE~~~~  171 (280)
T cd05608         156 GYAGTPGFMAPELLQG  171 (280)
T ss_pred             ccCCCcCccCHHHhcC
Confidence            2257889999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.97  E-value=1.4e-30  Score=231.22  Aligned_cols=165  Identities=25%  Similarity=0.277  Sum_probs=141.6

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEe-chhhhHHHHHHHHHHHHHHh-ccCCCCcceEEEcee-eee---
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNW-FDY---  164 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~-~~~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~-~~~---  164 (264)
                      .-++++.+.|.+|||+.||+|++...|..+|+|.+. .++...+...+|+++++.|+ |+||     |.+++. ...   
T Consensus        36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nI-----V~yidss~~~~~~  110 (738)
T KOG1989|consen   36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNI-----VSYIDSSAINRSS  110 (738)
T ss_pred             CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCce-----eeEeccccccccC
Confidence            356899999999999999999999988889999765 45667788999999999998 6666     999993 221   


Q ss_pred             ---CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEeecCCcEEeccC
Q 024661          165 ---RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDY  238 (264)
Q Consensus       165 ---~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dikp~Nili~~~~~v~l~Df  238 (264)
                         ..+++|+|||| ||+|.+++..+...+|++.++++|+.|+++|+.+||.+.  |||||||-+||||..+|+.|||||
T Consensus       111 ~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDF  190 (738)
T KOG1989|consen  111 NNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDF  190 (738)
T ss_pred             CCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcc
Confidence               24789999999 799999999776678999999999999999999999997  999999999999999999999999


Q ss_pred             CCCCcCCC---------------CcccceeeeeceeE
Q 024661          239 KVPSPRHA---------------FSFQTFLSMASRVY  260 (264)
Q Consensus       239 g~a~~~~~---------------~~~~~~~y~ape~~  260 (264)
                      |.|+-...               ..+-|+.|.+||++
T Consensus       191 GSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMI  227 (738)
T KOG1989|consen  191 GSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMI  227 (738)
T ss_pred             cccccccCCCccHHHHHHHHHHHHhhCCccccChHHH
Confidence            99875321               11347889999963

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=1.7e-30  Score=229.90  Aligned_cols=173  Identities=24%  Similarity=0.375  Sum_probs=153.7

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee---
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY---  164 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~---  164 (264)
                      ..-.+.|++.+.||.|.+|+||+++.+.+++..|+|+........+++..|.++++...++    +|++.++++|..   
T Consensus        15 pdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~h----pnv~~fyg~~~k~~~   90 (953)
T KOG0587|consen   15 PDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHH----PNVATFYGAFIKKDP   90 (953)
T ss_pred             CCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCC----CCcceEEEEEEEecC
Confidence            3445679999999999999999999999999999999887777778888899999987643    344999988865   


Q ss_pred             --CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCC
Q 024661          165 --RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVP  241 (264)
Q Consensus       165 --~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a  241 (264)
                        .+.+||||||| +|+.-|+++...+.++.|..+..|++.++.||.+||.+.++|||||-.|||++.++.|||+|||++
T Consensus        91 ~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvS  170 (953)
T KOG0587|consen   91 GNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVS  170 (953)
T ss_pred             CCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeee
Confidence              57899999999 999999999887889999999999999999999999999999999999999999999999999998


Q ss_pred             CcC------CCCcccceeeeeceeEeecC
Q 024661          242 SPR------HAFSFQTFLSMASRVYICIN  264 (264)
Q Consensus       242 ~~~------~~~~~~~~~y~ape~~~~~~  264 (264)
                      ...      .....||++|||||+++|.+
T Consensus       171 aQldsT~grRnT~iGtP~WMAPEViac~e  199 (953)
T KOG0587|consen  171 AQLDSTVGRRNTFIGTPYWMAPEVIACDE  199 (953)
T ss_pred             eeeecccccccCcCCCcccccceeeeccc
Confidence            653      34567999999999999963

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.97  E-value=7.4e-31  Score=223.18  Aligned_cols=166  Identities=20%  Similarity=0.366  Sum_probs=142.9

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .+.++|++.+.||.|+||.||+|.+..+++.||+|.+....   .....+.+|+.+++.++|+|+     +++++++...
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~   86 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENV-----IGLLDVFTPA   86 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCch-----hhhhhhhccc
Confidence            45578999999999999999999999999999999987432   234567789999999999988     8888877542


Q ss_pred             ------CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          166 ------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       166 ------~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                            ...|++|++++++|.+++...   .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus        87 ~~~~~~~~~~~~~~~~~~~l~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg  163 (343)
T cd07878          87 TSIENFNEVYLVTNLMGADLNNIVKCQ---KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFG  163 (343)
T ss_pred             ccccccCcEEEEeecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCc
Confidence                  457999999999999888643   59999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCCC---cccceeeeeceeEee
Q 024661          240 VPSPRHAF---SFQTFLSMASRVYIC  262 (264)
Q Consensus       240 ~a~~~~~~---~~~~~~y~ape~~~~  262 (264)
                      ++......   ..++..|+|||++.+
T Consensus       164 ~~~~~~~~~~~~~~t~~y~aPE~~~~  189 (343)
T cd07878         164 LARQADDEMTGYVATRWYRAPEIMLN  189 (343)
T ss_pred             cceecCCCcCCccccccccCchHhcC
Confidence            99765432   347889999998754

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.97  E-value=2.9e-30  Score=214.12  Aligned_cols=164  Identities=21%  Similarity=0.305  Sum_probs=142.9

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      .|+..+.||.|+||+||+|.+..+++.+|+|.+....    .....+.+|+++++.++|+++     +.+.+.+..++..
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i-----~~~~~~~~~~~~~   75 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFV-----VNLAYAYETKDAL   75 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCc-----eeEEEEEecCCEE
Confidence            3788899999999999999999999999999987532    223456789999999999888     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC--
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH--  245 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~--  245 (264)
                      |++|||+ +++|.+++.......+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++....  
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~  155 (285)
T cd05632          76 CLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG  155 (285)
T ss_pred             EEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC
Confidence            9999999 8899988876544579999999999999999999999999999999999999999999999999986532  


Q ss_pred             ---CCcccceeeeeceeEe
Q 024661          246 ---AFSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ---~~~~~~~~y~ape~~~  261 (264)
                         ....++..|+|||++.
T Consensus       156 ~~~~~~~g~~~~~aPE~~~  174 (285)
T cd05632         156 ESIRGRVGTVGYMAPEVLN  174 (285)
T ss_pred             CcccCCCCCcCccChHHhc
Confidence               1235788999999874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.97  E-value=2.1e-30  Score=229.67  Aligned_cols=169  Identities=24%  Similarity=0.265  Sum_probs=142.0

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      ...++|.+.+.||+|+||+||+|.+..+++.||+|++...   ......+.+|+.++..+.|+++     +++++.+...
T Consensus        29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~i-----v~~~~~~~~~  103 (496)
T PTZ00283         29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSI-----VKCHEDFAKK  103 (496)
T ss_pred             ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcE-----EEeecceecc
Confidence            4457899999999999999999999999999999998743   3344567789999988888877     8877766432


Q ss_pred             C--------EEEEEEecC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEE
Q 024661          166 N--------HICIVFEKL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK  234 (264)
Q Consensus       166 ~--------~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~  234 (264)
                      +        .+++||||+ +|+|.+++....  ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus       104 ~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vk  183 (496)
T PTZ00283        104 DPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVK  183 (496)
T ss_pred             cccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEE
Confidence            2        478999999 999999987532  34689999999999999999999999999999999999999999999


Q ss_pred             eccCCCCCcCC--------CCcccceeeeeceeEee
Q 024661          235 VPDYKVPSPRH--------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       235 l~Dfg~a~~~~--------~~~~~~~~y~ape~~~~  262 (264)
                      |+|||+++...        ....+|..|||||++.+
T Consensus       184 L~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~  219 (496)
T PTZ00283        184 LGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRR  219 (496)
T ss_pred             EEecccCeeccccccccccccccCCcceeCHHHhCC
Confidence            99999986532        12357889999998754

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.97  E-value=1.9e-30  Score=211.80  Aligned_cols=161  Identities=34%  Similarity=0.496  Sum_probs=141.6

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHH---HHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE---AAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~---~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      |++.+.||+|+||+||++.+..+++.+|+|++........   ...+|+.+++.+.|+++     +++++++.+....++
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i-----~~~~~~~~~~~~~~~   75 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNI-----VQILDVFQDDNYLYI   75 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTB-----CHEEEEEEESSEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccc-----ccccccccccccccc
Confidence            7899999999999999999999999999999986543332   33559999999999888     999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC-----
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR-----  244 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~-----  244 (264)
                      |||++ +++|.+++....  .+++..++.++.||+.||.+||++|++|+||||+||+++.++.++|+|||.+...     
T Consensus        76 v~~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~  153 (260)
T PF00069_consen   76 VMEYCPGGSLQDYLQKNK--PLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNE  153 (260)
T ss_dssp             EEEEETTEBHHHHHHHHS--SBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTS
T ss_pred             cccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999 669999998544  7999999999999999999999999999999999999999999999999998641     


Q ss_pred             -CCCcccceeeeeceeEe
Q 024661          245 -HAFSFQTFLSMASRVYI  261 (264)
Q Consensus       245 -~~~~~~~~~y~ape~~~  261 (264)
                       .....++..|+|||++.
T Consensus       154 ~~~~~~~~~~y~aPE~~~  171 (260)
T PF00069_consen  154 NFNPFVGTPEYMAPEVLQ  171 (260)
T ss_dssp             EBSSSSSSGGGSCHHHHT
T ss_pred             cccccccccccccccccc
Confidence             12335778899999854

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.97  E-value=2.1e-30  Score=218.22  Aligned_cols=158  Identities=23%  Similarity=0.320  Sum_probs=136.3

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      +.||+|+||.||+|.+..+++.+|+|++++..    .....+..|..+++.+ .|+++     +++++++.+.+.+|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i-----~~~~~~~~~~~~~~lv~   75 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFL-----TQLHSCFQTKDRLFFVM   75 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCc-----cceeeEEEcCCEEEEEE
Confidence            46999999999999999999999999998542    2345566788888877 46666     99999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC------
Q 024661          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH------  245 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~------  245 (264)
                      ||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++....      
T Consensus        76 e~~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~  153 (318)
T cd05570          76 EYVNGGDLMFHIQRSG--RFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTT  153 (318)
T ss_pred             cCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcc
Confidence            999 899999988764  79999999999999999999999999999999999999999999999999986421      


Q ss_pred             CCcccceeeeeceeEee
Q 024661          246 AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~~~~~~~~y~ape~~~~  262 (264)
                      ....++..|||||++.+
T Consensus       154 ~~~~g~~~y~aPE~~~~  170 (318)
T cd05570         154 STFCGTPDYIAPEILSY  170 (318)
T ss_pred             cceecCccccCHHHhcC
Confidence            12347889999998754

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.97  E-value=3e-30  Score=236.73  Aligned_cols=166  Identities=20%  Similarity=0.272  Sum_probs=143.4

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech----hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++.++||+|+||.||+|.+..+++.||+|++...    ....+.+.+|+++++.+.|+|+     +++++++.+.+.
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNI-----Vkl~~v~~d~~~   76 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGI-----VPVYSICSDGDP   76 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCc-----CeEEEEEeeCCE
Confidence            5799999999999999999999999999999998642    2345678899999999999988     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEecc
Q 024661          168 ICIVFEKL-GPSLYDFLRKNS---------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  237 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~---------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~D  237 (264)
                      .|++|||+ |++|.+++....         ...++...+..++.||+.||+|||++||+||||||+|||++.++.++|+|
T Consensus        77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiD  156 (932)
T PRK13184         77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILD  156 (932)
T ss_pred             EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEe
Confidence            99999999 999999987421         12355677889999999999999999999999999999999999999999


Q ss_pred             CCCCCcCC------------------------CCcccceeeeeceeEee
Q 024661          238 YKVPSPRH------------------------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       238 fg~a~~~~------------------------~~~~~~~~y~ape~~~~  262 (264)
                      ||++....                        ....||..|||||.+.+
T Consensus       157 FGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g  205 (932)
T PRK13184        157 WGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG  205 (932)
T ss_pred             cCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC
Confidence            99997541                        01247889999998654

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.97  E-value=3.1e-30  Score=214.01  Aligned_cols=164  Identities=28%  Similarity=0.471  Sum_probs=137.8

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHh---ccCCCCcceEEEceeeee--
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLA---RHDIGGTRCVQIRNWFDY--  164 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~---~~~~~~~~~~~~~~~~~~--  164 (264)
                      +|++.+.||+|+||.||+|.+..+++.+|+|.++...   .......+|+.+++.+.   |+|+     +++++++..  
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni-----~~~~~~~~~~~   75 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNI-----VRLMDVCATSR   75 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCe-----eeeeeeecccc
Confidence            5899999999999999999999999999999887432   22345567888777764   5555     999988764  


Q ss_pred             ---CCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCC
Q 024661          165 ---RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVP  241 (264)
Q Consensus       165 ---~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a  241 (264)
                         ...++++||++.++|.+++.......+++..++.++.|++.||.|||++||+|+||||+|||++.++.+||+|||++
T Consensus        76 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~  155 (288)
T cd07863          76 TDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLA  155 (288)
T ss_pred             CCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCcc
Confidence               35689999999889999998765456899999999999999999999999999999999999999999999999998


Q ss_pred             CcCCC-----CcccceeeeeceeEe
Q 024661          242 SPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       242 ~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      .....     ...++..|+|||++.
T Consensus       156 ~~~~~~~~~~~~~~~~~y~aPE~~~  180 (288)
T cd07863         156 RIYSCQMALTPVVVTLWYRAPEVLL  180 (288)
T ss_pred             ccccCcccCCCccccccccCchHhh
Confidence            75432     234678899999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.97  E-value=3.6e-30  Score=213.51  Aligned_cols=164  Identities=21%  Similarity=0.308  Sum_probs=143.0

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      .|++.+.||+|+||.||++.+..+++.+|+|.+....    .....+..|+.+++.++|+++     +.+++.+.+++.+
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i-----~~~~~~~~~~~~~   75 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFV-----VSLAYAYETKDAL   75 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCe-----eeeeEEEecCCEE
Confidence            3788899999999999999999999999999886432    223456789999999998887     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-  246 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-  246 (264)
                      |+||||+ +++|.+++.......+++..+..++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++..... 
T Consensus        76 ~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~  155 (285)
T cd05630          76 CLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG  155 (285)
T ss_pred             EEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC
Confidence            9999999 89999998765545699999999999999999999999999999999999999999999999999865332 


Q ss_pred             ----CcccceeeeeceeEe
Q 024661          247 ----FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ----~~~~~~~y~ape~~~  261 (264)
                          ...++..|||||++.
T Consensus       156 ~~~~~~~g~~~y~aPE~~~  174 (285)
T cd05630         156 QTIKGRVGTVGYMAPEVVK  174 (285)
T ss_pred             ccccCCCCCccccChHHHc
Confidence                235788999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=3.6e-31  Score=227.21  Aligned_cols=144  Identities=23%  Similarity=0.394  Sum_probs=130.6

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      -|..++.||-|+||+|.++....|...||+|.+++..    ........|.+||......-+     |+++..|++++.+
T Consensus       630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WV-----VrLyySFQDkdnL  704 (1034)
T KOG0608|consen  630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWV-----VRLYYSFQDKDNL  704 (1034)
T ss_pred             ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcce-----EEEEEEeccCCce
Confidence            3888999999999999999999999999999987543    233456778889888877655     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      |+||||+ ||++..+|.+..  -|.|..+++|+.++..|++++|..|+|||||||+|||||.+|++||+|||+|+-
T Consensus       705 YFVMdYIPGGDmMSLLIrmg--IFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTG  778 (1034)
T KOG0608|consen  705 YFVMDYIPGGDMMSLLIRMG--IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG  778 (1034)
T ss_pred             EEEEeccCCccHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeecccccc
Confidence            9999999 999999999876  899999999999999999999999999999999999999999999999999963

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.97  E-value=1e-29  Score=207.29  Aligned_cols=165  Identities=24%  Similarity=0.354  Sum_probs=145.3

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      +|++.+.||.|+||.||++.+..+++.+++|.++..  ....+.+.+|+.+++.++|+|+     +++.+.+.+++.+|+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~l   75 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNI-----VAFKESFEADGHLYI   75 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEEECCEEEE
Confidence            488999999999999999999999999999988632  3445677889999999999888     999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---  246 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---  246 (264)
                      +|||+ +++|.+++.......+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||.+.....   
T Consensus        76 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~  155 (255)
T cd08219          76 VMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA  155 (255)
T ss_pred             EEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccccc
Confidence            99999 89999998865555689999999999999999999999999999999999999999999999999875432   


Q ss_pred             ---CcccceeeeeceeEee
Q 024661          247 ---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~~  262 (264)
                         ...++..|+|||++.+
T Consensus       156 ~~~~~~~~~~~~aPE~~~~  174 (255)
T cd08219         156 YACTYVGTPYYVPPEIWEN  174 (255)
T ss_pred             ccccccCCccccCHHHHcc
Confidence               2346778999998654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=4.2e-31  Score=212.23  Aligned_cols=167  Identities=19%  Similarity=0.288  Sum_probs=143.6

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      ..+|.++.+||+|+|.+|.+++.+++.+.+|+|+++++-    ...+-...|-.++.+...    ++.+|.+..+|+.+.
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn----~pflvglhscfqtes  324 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN----NPFLVGLHSCFQTES  324 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccC----CCeEEehhhhhcccc
Confidence            367999999999999999999999999999999998542    223344556555555432    366799999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc--
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP--  243 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~--  243 (264)
                      .+|+|.||+ ||+|.-.+++..  .++++.++.+..+|+.||.|||+.||+.||||.+|+|++..|++||+|+|++..  
T Consensus       325 rlffvieyv~ggdlmfhmqrqr--klpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l  402 (593)
T KOG0695|consen  325 RLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL  402 (593)
T ss_pred             eEEEEEEEecCcceeeehhhhh--cCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCC
Confidence            999999999 999987777655  799999999999999999999999999999999999999999999999999975  


Q ss_pred             ----CCCCcccceeeeeceeEeec
Q 024661          244 ----RHAFSFQTFLSMASRVYICI  263 (264)
Q Consensus       244 ----~~~~~~~~~~y~ape~~~~~  263 (264)
                          .....+||+.|+|||++++=
T Consensus       403 ~~gd~tstfcgtpnyiapeilrge  426 (593)
T KOG0695|consen  403 GPGDTTSTFCGTPNYIAPEILRGE  426 (593)
T ss_pred             CCCcccccccCCCcccchhhhccc
Confidence                23456899999999999873

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.97  E-value=5e-30  Score=211.80  Aligned_cols=158  Identities=21%  Similarity=0.338  Sum_probs=136.9

Q ss_pred             cccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC
Q 024661          100 MGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (264)
Q Consensus       100 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  175 (264)
                      ||+|+||.||++.+..+|+.+|+|.+....    ........|+++++.++|+++     +.+++.+.++..+|+||||+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i-----~~~~~~~~~~~~~~lv~e~~   75 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFI-----VNLAYAFESKTHLCLVMSLM   75 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcE-----EEEEEEEecCCeEEEEEecC
Confidence            799999999999999999999999986422    123445669999999998887     99999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-----Ccc
Q 024661          176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-----FSF  249 (264)
Q Consensus       176 -~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-----~~~  249 (264)
                       +++|.+++.......+++..+..++.||+.||+|||+.||+||||||+||+++.++.++|+|||++.....     ...
T Consensus        76 ~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~  155 (277)
T cd05607          76 NGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRA  155 (277)
T ss_pred             CCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccC
Confidence             89999988765545689999999999999999999999999999999999999999999999999875432     234


Q ss_pred             cceeeeeceeEee
Q 024661          250 QTFLSMASRVYIC  262 (264)
Q Consensus       250 ~~~~y~ape~~~~  262 (264)
                      ++..|+|||++.+
T Consensus       156 ~~~~y~aPE~~~~  168 (277)
T cd05607         156 GTNGYMAPEILKE  168 (277)
T ss_pred             CCCCccCHHHHcc
Confidence            7789999998643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.97  E-value=5e-30  Score=214.23  Aligned_cols=164  Identities=25%  Similarity=0.403  Sum_probs=143.8

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      ++|.+.++||.|+||.||+|.+..+++.||+|.++..  ......+.+|+.+++.++|+|+     +.+++++...+..+
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-----~~~~~~~~~~~~~~   80 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI-----VTLHDIIHTEKSLT   80 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCc-----ceEEEEEecCCeEE
Confidence            5799999999999999999999999999999998743  2334567789999999999988     99999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---
Q 024661          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---  246 (264)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---  246 (264)
                      +||||+.++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.....   
T Consensus        81 lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~  159 (301)
T cd07873          81 LVFEYLDKDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK  159 (301)
T ss_pred             EEEeccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence            999999889999987653 3688999999999999999999999999999999999999999999999999865321   


Q ss_pred             ---CcccceeeeeceeEe
Q 024661          247 ---FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~  261 (264)
                         ...++..|++||++.
T Consensus       160 ~~~~~~~~~~y~~PE~~~  177 (301)
T cd07873         160 TYSNEVVTLWYRPPDILL  177 (301)
T ss_pred             cccccceeecccCcHHHh
Confidence               234577899999764

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.97  E-value=2.1e-30  Score=222.71  Aligned_cols=165  Identities=23%  Similarity=0.315  Sum_probs=138.3

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCC-----CcEEEEEEEech--hhhHHHHHHHHHHHHHH-hccCCCCcceEEEceeee
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~  163 (264)
                      ++|++.+.||+|+||.||+|.+...     +..||+|.++..  ....+.+.+|+.+++.+ .|+|+     +++++++.
T Consensus        38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nI-----v~~~~~~~  112 (374)
T cd05106          38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNI-----VNLLGACT  112 (374)
T ss_pred             HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCce-----eeEeeEec
Confidence            4699999999999999999986544     357999998743  23456788899999999 78887     99999999


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhcC-------------------------------------------------------
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKNS-------------------------------------------------------  187 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~-------------------------------------------------------  187 (264)
                      ..+.+|+||||+ +|+|.+++....                                                       
T Consensus       113 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (374)
T cd05106         113 HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS  192 (374)
T ss_pred             CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence            999999999999 999999986421                                                       


Q ss_pred             -------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC-------
Q 024661          188 -------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF-------  247 (264)
Q Consensus       188 -------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~-------  247 (264)
                                   ...+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+++.....       
T Consensus       193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~  272 (374)
T cd05106         193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKG  272 (374)
T ss_pred             ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeecc
Confidence                         124788889999999999999999999999999999999999999999999998753321       


Q ss_pred             -cccceeeeeceeEe
Q 024661          248 -SFQTFLSMASRVYI  261 (264)
Q Consensus       248 -~~~~~~y~ape~~~  261 (264)
                       ..++..|||||++.
T Consensus       273 ~~~~~~~y~aPE~~~  287 (374)
T cd05106         273 NARLPVKWMAPESIF  287 (374)
T ss_pred             CCCCccceeCHHHhc
Confidence             12345699999764

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.97  E-value=3.4e-30  Score=220.81  Aligned_cols=164  Identities=24%  Similarity=0.321  Sum_probs=141.0

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee--
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--  164 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~--  164 (264)
                      +.++|++.+.||+|+||.||+|.+..+++.+|+|++...   ......+.+|+.+++.+.|+|+     +.+++.+..  
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----i~~~~~~~~~~   96 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI-----IGLLNVFTPQK   96 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCc-----cccceeecccc
Confidence            457899999999999999999999999999999998642   2344667889999999999988     777777644  


Q ss_pred             ----CCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCC
Q 024661          165 ----RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV  240 (264)
Q Consensus       165 ----~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~  240 (264)
                          ...+|+||||++++|.+++..    .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus        97 ~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~  172 (364)
T cd07875          97 SLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL  172 (364)
T ss_pred             cccccCeEEEEEeCCCCCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCC
Confidence                346899999998889888754    478899999999999999999999999999999999999999999999999


Q ss_pred             CCcCCC-----CcccceeeeeceeEee
Q 024661          241 PSPRHA-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       241 a~~~~~-----~~~~~~~y~ape~~~~  262 (264)
                      ++....     ...++..|+|||++.+
T Consensus       173 a~~~~~~~~~~~~~~t~~y~aPE~~~~  199 (364)
T cd07875         173 ARTAGTSFMMTPYVVTRYYRAPEVILG  199 (364)
T ss_pred             ccccCCCCcccCCcccCCcCCHHHHhC
Confidence            976433     2357889999998754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.5e-31  Score=221.66  Aligned_cols=168  Identities=23%  Similarity=0.348  Sum_probs=149.4

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech----hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      .-.+.|+.-+.||+|+||.||-++.+.||+.+|+|.+.+.    ........+|-.+|+.++.+.+     |.+-..|++
T Consensus       182 vt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~Fi-----VslaYAfeT  256 (591)
T KOG0986|consen  182 VTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFI-----VSLAYAFET  256 (591)
T ss_pred             ccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcE-----EEEeeeecC
Confidence            3446689999999999999999999999999999988643    2334566789999999988866     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      .+.+|+||..| ||+|.-.|.+.....|+++.++.|+.+|+.||++||+.+||+||+||+|||+|+.|+|+|+|+|+|..
T Consensus       257 kd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAve  336 (591)
T KOG0986|consen  257 KDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVE  336 (591)
T ss_pred             CCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEe
Confidence            99999999999 99999888887777899999999999999999999999999999999999999999999999999987


Q ss_pred             CCC-----CcccceeeeeceeEe
Q 024661          244 RHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~-----~~~~~~~y~ape~~~  261 (264)
                      ...     ...||..|||||++.
T Consensus       337 i~~g~~~~~rvGT~GYMAPEvl~  359 (591)
T KOG0986|consen  337 IPEGKPIRGRVGTVGYMAPEVLQ  359 (591)
T ss_pred             cCCCCccccccCcccccCHHHHc
Confidence            543     337999999999874

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.97  E-value=5.9e-31  Score=228.50  Aligned_cols=165  Identities=25%  Similarity=0.327  Sum_probs=143.2

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC---
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN---  166 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~---  166 (264)
                      .-|...+.||.|+||.||+++++.+|+.||||.+++.  ....+...+|++++++++|+||     |++++.-+...   
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NI-----Vk~f~iee~~~~~~   87 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNI-----VKLFDIEETKFLGL   87 (732)
T ss_pred             cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhh-----hhhcccCCccccCc
Confidence            4477788999999999999999999999999998853  4567888999999999999998     99888765543   


Q ss_pred             ---EEEEEEecC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC--C--cEEecc
Q 024661          167 ---HICIVFEKL-GPSLYDFLRKNS-YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA--E--YVKVPD  237 (264)
Q Consensus       167 ---~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~--~--~v~l~D  237 (264)
                         ...+||||| +|+|...+++-. ..++++..++.++..++.||.|||++||+||||||.||++..+  |  -.||+|
T Consensus        88 ~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtD  167 (732)
T KOG4250|consen   88 VTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTD  167 (732)
T ss_pred             ccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeec
Confidence               578999999 999999998542 3579999999999999999999999999999999999998743  4  469999


Q ss_pred             CCCCCcCCCCc-----ccceeeeeceeEe
Q 024661          238 YKVPSPRHAFS-----FQTFLSMASRVYI  261 (264)
Q Consensus       238 fg~a~~~~~~~-----~~~~~y~ape~~~  261 (264)
                      ||.|+.....+     +||..|.+||+|-
T Consensus       168 fG~Arel~d~s~~~S~vGT~~YLhPel~E  196 (732)
T KOG4250|consen  168 FGAARELDDNSLFTSLVGTEEYLHPELYE  196 (732)
T ss_pred             ccccccCCCCCeeeeecCchhhcChHHHh
Confidence            99999876543     6899999999863

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.97  E-value=1.1e-29  Score=211.06  Aligned_cols=164  Identities=26%  Similarity=0.443  Sum_probs=146.2

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++.+.||.|+||.||++.+..+++.+++|++....    ...+.+.+|+++++++.|+|+     +.+++++.+.+.
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~   75 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFL-----VNLYGSFQDDSN   75 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCc-----cceeeEEEcCCe
Confidence            36999999999999999999999999999999987532    345678889999999999888     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      +|+||||+ +++|.+++....  .+++..+..++.|++.||.|||++|++|+||+|+|||++.++.++|+|||++.....
T Consensus        76 ~~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~  153 (290)
T cd05580          76 LYLVMEYVPGGELFSHLRKSG--RFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKG  153 (290)
T ss_pred             EEEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence            99999999 999999998765  789999999999999999999999999999999999999999999999999876443


Q ss_pred             C---cccceeeeeceeEee
Q 024661          247 F---SFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ~---~~~~~~y~ape~~~~  262 (264)
                      .   ..++..|++||.+.+
T Consensus       154 ~~~~~~~~~~y~aPE~~~~  172 (290)
T cd05580         154 RTYTLCGTPEYLAPEIILS  172 (290)
T ss_pred             CCCCCCCCccccChhhhcC
Confidence            2   346788999997653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=2e-31  Score=228.62  Aligned_cols=163  Identities=25%  Similarity=0.376  Sum_probs=142.4

Q ss_pred             CCCe-EEEeecccCccEEEEEEEeCCCCcEEEEEEEe-----chhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           91 TPRY-RILSKMGEGTFGQVVECFDNEKKELVAIKIVR-----SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        91 ~~~y-~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~-----~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      .++| +...+||+|+|.+||+|.|..+|..||.-.++     +.....+++..|+.+|+.|+|+||     ++++++|.+
T Consensus        38 ~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NI-----irfy~SW~d  112 (632)
T KOG0584|consen   38 TGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNI-----IRFYDSWVD  112 (632)
T ss_pred             CCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCce-----eeeeeheec
Confidence            3444 44568999999999999999999999966544     234556899999999999999998     999999988


Q ss_pred             CC--EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEeecC-CcEEeccC
Q 024661          165 RN--HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSA-EYVKVPDY  238 (264)
Q Consensus       165 ~~--~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dikp~Nili~~~-~~v~l~Df  238 (264)
                      ..  .+.+|+|++ .|+|..|+++.+  ..+.+.+..|++||+.||.|||++.  |+|||||.+||+|+.+ |.|||+|+
T Consensus       113 ~~n~~in~iTEL~TSGtLr~Y~kk~~--~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDL  190 (632)
T KOG0584|consen  113 TDNKTINFITELFTSGTLREYRKKHR--RVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDL  190 (632)
T ss_pred             CCCceeeeeeecccCCcHHHHHHHhc--cCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecch
Confidence            55  489999999 999999999987  8999999999999999999999984  9999999999999865 89999999


Q ss_pred             CCCCcCCC----CcccceeeeeceeE
Q 024661          239 KVPSPRHA----FSFQTFLSMASRVY  260 (264)
Q Consensus       239 g~a~~~~~----~~~~~~~y~ape~~  260 (264)
                      |+|+....    .-+||+.+||||+|
T Consensus       191 GLAtl~r~s~aksvIGTPEFMAPEmY  216 (632)
T KOG0584|consen  191 GLATLLRKSHAKSVIGTPEFMAPEMY  216 (632)
T ss_pred             hHHHHhhccccceeccCccccChHHH
Confidence            99986432    34799999999987

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3e-30  Score=221.02  Aligned_cols=163  Identities=23%  Similarity=0.334  Sum_probs=141.5

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCc---E-EEEEEEec----hhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKE---L-VAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~---~-vaiK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      +-.+.++||+|.||.||+|..+..+.   . ||+|..+.    .......+.+|.++++.++|+|+     ++++|+..+
T Consensus       158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NV-----Vr~yGVa~~  232 (474)
T KOG0194|consen  158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNV-----VRFYGVAVL  232 (474)
T ss_pred             CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCE-----EEEEEEEcC
Confidence            34456899999999999999866432   3 89998773    24567889999999999999998     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      +..+++|||+| ||+|.++|++.+. .++..+...++.+.+.||+|||+++++||||..+|+|++.++.+||+|||+++.
T Consensus       233 ~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~  311 (474)
T KOG0194|consen  233 EEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRA  311 (474)
T ss_pred             CCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccC
Confidence            99999999999 9999999998763 589999999999999999999999999999999999999999999999999988


Q ss_pred             CCCCcccc------eeeeeceeEe
Q 024661          244 RHAFSFQT------FLSMASRVYI  261 (264)
Q Consensus       244 ~~~~~~~~------~~y~ape~~~  261 (264)
                      ...+....      ..|+|||.+-
T Consensus       312 ~~~~~~~~~~~klPirWLAPEtl~  335 (474)
T KOG0194|consen  312 GSQYVMKKFLKKLPIRWLAPETLN  335 (474)
T ss_pred             CcceeeccccccCcceecChhhhc
Confidence            76444332      4599999753

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.97  E-value=7.1e-30  Score=209.64  Aligned_cols=164  Identities=20%  Similarity=0.280  Sum_probs=140.2

Q ss_pred             CCeEEEeecccCccEEEEEEEeC---CCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      .+|++.+.||+|+||.||+|.+.   ..+..+|+|.++..  ......+.+|+..++.++|+|+     +++++++...+
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~   79 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNI-----VRLEGVITRGN   79 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCc-----CeEEEEEecCC
Confidence            56999999999999999999865   34668999988753  2344678889999999998888     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      ..++||||+ +++|.+++.... ..+++..++.++.||+.||+|||++|++||||||+|||++.++.++++|||.+....
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~  158 (266)
T cd05064          80 TMMIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK  158 (266)
T ss_pred             CcEEEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence            999999999 889999998653 368999999999999999999999999999999999999999999999999876532


Q ss_pred             CC-------cccceeeeeceeEe
Q 024661          246 AF-------SFQTFLSMASRVYI  261 (264)
Q Consensus       246 ~~-------~~~~~~y~ape~~~  261 (264)
                      ..       ..++..|+|||++.
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~  181 (266)
T cd05064         159 SEAIYTTMSGKSPVLWAAPEAIQ  181 (266)
T ss_pred             ccchhcccCCCCceeecCHHHHh
Confidence            21       22356799999764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.97  E-value=4.9e-30  Score=220.59  Aligned_cols=166  Identities=24%  Similarity=0.306  Sum_probs=138.9

Q ss_pred             CCeEEEeecccCccEEEEEEEe-----CCCCcEEEEEEEech--hhhHHHHHHHHHHHHHH-hccCCCCcceEEEceeee
Q 024661           92 PRYRILSKMGEGTFGQVVECFD-----NEKKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~  163 (264)
                      ++|++.+.||+|+||.||+|++     ..++..||+|+++..  ....+.+.+|+.+++.+ .|+|+     +++++++.
T Consensus        35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnI-----v~l~~~~~  109 (375)
T cd05104          35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINI-----VNLLGACT  109 (375)
T ss_pred             HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcce-----eeeeeeec
Confidence            4699999999999999999974     345678999998643  23456788999999999 78877     99999999


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhcC-------------------------------------------------------
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKNS-------------------------------------------------------  187 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~-------------------------------------------------------  187 (264)
                      +.+..++||||+ +|+|.+++....                                                       
T Consensus       110 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  189 (375)
T cd05104         110 VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV  189 (375)
T ss_pred             cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence            999999999999 999999987432                                                       


Q ss_pred             ------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC--
Q 024661          188 ------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF--  247 (264)
Q Consensus       188 ------------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~--  247 (264)
                                        ...+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++......  
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~  269 (375)
T cd05104         190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN  269 (375)
T ss_pred             ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence                              124778889999999999999999999999999999999999999999999998754321  


Q ss_pred             ------cccceeeeeceeEee
Q 024661          248 ------SFQTFLSMASRVYIC  262 (264)
Q Consensus       248 ------~~~~~~y~ape~~~~  262 (264)
                            ..++..|||||++.+
T Consensus       270 ~~~~~~~~~~~~y~aPE~~~~  290 (375)
T cd05104         270 YVVKGNARLPVKWMAPESIFN  290 (375)
T ss_pred             ccccCCCCCCcceeChhHhcC
Confidence                  123456999998643

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.97  E-value=9.4e-30  Score=210.70  Aligned_cols=164  Identities=26%  Similarity=0.436  Sum_probs=142.3

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      +|++.+.||+|++|.||+|.+..++..|++|.+...   ......+.+|+.+++.+.|+++     +++++++.+++.+|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~   75 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNI-----VCLQDVLMQESRLY   75 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCE-----eeeEEEEeeCCeEE
Confidence            488999999999999999999999999999988643   2234567889999999998887     99999999999999


Q ss_pred             EEEecCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC---
Q 024661          170 IVFEKLGPSLYDFLRKNS-YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH---  245 (264)
Q Consensus       170 lv~e~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~---  245 (264)
                      +||||+.++|.+++.... ...+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++....   
T Consensus        76 ~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  155 (285)
T cd07861          76 LIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV  155 (285)
T ss_pred             EEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence            999999889999887543 2468999999999999999999999999999999999999999999999999986432   


Q ss_pred             ---CCcccceeeeeceeEe
Q 024661          246 ---AFSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ---~~~~~~~~y~ape~~~  261 (264)
                         ....++..|+|||++.
T Consensus       156 ~~~~~~~~~~~y~aPE~~~  174 (285)
T cd07861         156 RVYTHEVVTLWYRAPEVLL  174 (285)
T ss_pred             ccccCCcccccccChHHhc
Confidence               1224577899999764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.97  E-value=1.1e-29  Score=208.53  Aligned_cols=164  Identities=26%  Similarity=0.324  Sum_probs=144.0

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      .++|++.+.||+|+||.||+|.+..+++.+++|++.... .....+.+|+.+++.+.|+++     +++++.+..++.+|
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----i~~~~~~~~~~~~~   82 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNI-----VAYFGSYLSREKLW   82 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCe-----eeeeEEEEeCCEEE
Confidence            457999999999999999999999999999999987432 334567789999999999888     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC--
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA--  246 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~--  246 (264)
                      +||||+ +++|.+++....  .+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++.....  
T Consensus        83 iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd06646          83 ICMEYCGGGSLQDIYHVTG--PLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI  160 (267)
T ss_pred             EEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccc
Confidence            999999 889999987654  689999999999999999999999999999999999999999999999999875321  


Q ss_pred             ----CcccceeeeeceeEe
Q 024661          247 ----FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ----~~~~~~~y~ape~~~  261 (264)
                          ...++..|++||.+.
T Consensus       161 ~~~~~~~~~~~y~~PE~~~  179 (267)
T cd06646         161 AKRKSFIGTPYWMAPEVAA  179 (267)
T ss_pred             cccCccccCccccCHhHcc
Confidence                224677899999763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.97  E-value=6.7e-30  Score=210.19  Aligned_cols=167  Identities=23%  Similarity=0.351  Sum_probs=145.0

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeee----
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDY----  164 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~----  164 (264)
                      ..+.|++.+.||.|+||.||+|.+..+++.+++|++.........+..|+.+++.+ .|+|+     +++++++..    
T Consensus         4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i-----~~~~~~~~~~~~~   78 (272)
T cd06637           4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNI-----ATYYGAFIKKNPP   78 (272)
T ss_pred             hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCe-----eeEeeEEeecCCC
Confidence            34679999999999999999999999999999999976555566788899999998 57777     999998865    


Q ss_pred             --CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCC
Q 024661          165 --RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVP  241 (264)
Q Consensus       165 --~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a  241 (264)
                        ...+|++|||+ +++|.+++.......+++..+..++.|++.||.|||+++|+|+||+|+||+++.++.++|+|||++
T Consensus        79 ~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~  158 (272)
T cd06637          79 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS  158 (272)
T ss_pred             CCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCc
Confidence              35789999999 889999998765557899999999999999999999999999999999999999999999999998


Q ss_pred             CcCCC------CcccceeeeeceeEe
Q 024661          242 SPRHA------FSFQTFLSMASRVYI  261 (264)
Q Consensus       242 ~~~~~------~~~~~~~y~ape~~~  261 (264)
                      .....      ...++..|+|||++.
T Consensus       159 ~~~~~~~~~~~~~~g~~~y~aPE~~~  184 (272)
T cd06637         159 AQLDRTVGRRNTFIGTPYWMAPEVIA  184 (272)
T ss_pred             eecccccccCCcccccccccCHhHhc
Confidence            75322      234678899999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.97  E-value=1.4e-30  Score=205.90  Aligned_cols=164  Identities=25%  Similarity=0.417  Sum_probs=139.5

Q ss_pred             ccCCCeEEE-eecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee---
Q 024661           89 NLTPRYRIL-SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY---  164 (264)
Q Consensus        89 ~~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~---  164 (264)
                      .+.++|.+. ++||-|-.|+|..|.++.+++.+|+|++...    +...+|++.......+    +++|+++++|++   
T Consensus        58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds----~KARrEVeLHw~~s~h----~~iV~IidVyeNs~~  129 (400)
T KOG0604|consen   58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS----PKARREVELHWMASGH----PHIVSIIDVYENSYQ  129 (400)
T ss_pred             cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC----HHHHhHhhhhhhhcCC----CceEEeehhhhhhcc
Confidence            456778875 4799999999999999999999999987643    3456688766655422    445999998865   


Q ss_pred             -CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC---CcEEeccCC
Q 024661          165 -RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA---EYVKVPDYK  239 (264)
Q Consensus       165 -~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~---~~v~l~Dfg  239 (264)
                       ...+.+|||++ ||.|++.++++....|+|.++..|+.||..|+.|||+.+|.||||||+|+|....   ..+||+|||
T Consensus       130 ~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfG  209 (400)
T KOG0604|consen  130 GRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFG  209 (400)
T ss_pred             CceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccc
Confidence             56789999999 9999999999988889999999999999999999999999999999999999854   579999999


Q ss_pred             CCCcCCC-----CcccceeeeeceeE
Q 024661          240 VPSPRHA-----FSFQTFLSMASRVY  260 (264)
Q Consensus       240 ~a~~~~~-----~~~~~~~y~ape~~  260 (264)
                      +|.....     ..+.|++|.|||++
T Consensus       210 FAK~t~~~~~L~TPc~TPyYvaPevl  235 (400)
T KOG0604|consen  210 FAKETQEPGDLMTPCFTPYYVAPEVL  235 (400)
T ss_pred             cccccCCCccccCCcccccccCHHHh
Confidence            9987552     44689999999986

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.97  E-value=1.3e-30  Score=192.43  Aligned_cols=164  Identities=27%  Similarity=0.437  Sum_probs=145.7

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      +|.-.++||+|.||+||+|+...+++.||+|.++..   +.......+|+-+++.++|.|+     +++++....++.+-
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhkni-----vrl~dvlhsdkklt   77 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI-----VRLHDVLHSDKKLT   77 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcce-----eehhhhhccCceeE
Confidence            467788999999999999999999999999998743   3445677899999999999998     99999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---
Q 024661          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---  246 (264)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---  246 (264)
                      +|+|||..+|..+..+.. ..++.+.++.++.|++.||.|+|++++.|||+||.|+||+.+|.+||+|||+++....   
T Consensus        78 lvfe~cdqdlkkyfdsln-g~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvr  156 (292)
T KOG0662|consen   78 LVFEFCDQDLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR  156 (292)
T ss_pred             EeHHHhhHHHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceE
Confidence            999999999999998765 4699999999999999999999999999999999999999999999999999975322   


Q ss_pred             ---CcccceeeeeceeEee
Q 024661          247 ---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~~  262 (264)
                         -..-|.+|..|.++.+
T Consensus       157 cysaevvtlwyrppdvlfg  175 (292)
T KOG0662|consen  157 CYSAEVVTLWYRPPDVLFG  175 (292)
T ss_pred             eeeceeeeeeccCcceeee
Confidence               2235778989988765

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.97  E-value=2.3e-29  Score=210.96  Aligned_cols=164  Identities=23%  Similarity=0.339  Sum_probs=144.7

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      ++|++.+.||+|+||.||++.+..++..+++|.+...  ......+.+|+++++.++|+|+     +++++.+.+++.+|
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~   75 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYI-----VGFYGAFYSDGEIS   75 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEeeCCEEE
Confidence            3599999999999999999999999999999988643  3345668889999999999988     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-  246 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-  246 (264)
                      +||||+ +++|.+++....  .+++..+..++.|++.||.|||+ ++++|+||||+|||++.++.++|+|||++..... 
T Consensus        76 lv~ey~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  153 (308)
T cd06615          76 ICMEHMDGGSLDQVLKKAG--RIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS  153 (308)
T ss_pred             EEeeccCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc
Confidence            999999 899999998764  78999999999999999999997 6999999999999999999999999999865432 


Q ss_pred             ---CcccceeeeeceeEee
Q 024661          247 ---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~~  262 (264)
                         ...++..|++||.+.+
T Consensus       154 ~~~~~~~~~~~~aPE~~~~  172 (308)
T cd06615         154 MANSFVGTRSYMSPERLQG  172 (308)
T ss_pred             ccccCCCCcCccChhHhcC
Confidence               3346788999997643

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.97  E-value=1.3e-29  Score=207.60  Aligned_cols=165  Identities=19%  Similarity=0.246  Sum_probs=145.6

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      ..|.+.+.||+|+||.||+|.+..+++.+++|.+.........+.+|+++++.+.|+++     +++++++..++.++++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~lv   80 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNL-----VQLLGVCTREPPFYII   80 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCCh-----hheEEEEcCCCCcEEE
Confidence            45899999999999999999999999999999988665556778899999999999888     9999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCCc--
Q 024661          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS--  248 (264)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~~--  248 (264)
                      |||+ +++|.+++.......+++..++.++.|++.||.|||++|++|+||||+||++++++.++|+|||++.......  
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~  160 (263)
T cd05052          81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT  160 (263)
T ss_pred             EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceee
Confidence            9999 8999999986554568999999999999999999999999999999999999999999999999987644321  


Q ss_pred             -----ccceeeeeceeEe
Q 024661          249 -----FQTFLSMASRVYI  261 (264)
Q Consensus       249 -----~~~~~y~ape~~~  261 (264)
                           ..+..|+|||.+.
T Consensus       161 ~~~~~~~~~~y~aPE~~~  178 (263)
T cd05052         161 AHAGAKFPIKWTAPESLA  178 (263)
T ss_pred             ccCCCCCccccCCHHHhc
Confidence                 1245699999764

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.97  E-value=1.1e-29  Score=219.46  Aligned_cols=167  Identities=22%  Similarity=0.285  Sum_probs=139.6

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCC-----CcEEEEEEEech--hhhHHHHHHHHHHHHHHh-ccCCCCcceEEEceee
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSI--NKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWF  162 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~  162 (264)
                      .++|++++.||+|+||.||+|.+...     +..||+|+++..  ....+.+.+|+.+++.+. |+|+     +++++++
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnI-----v~l~~~~  110 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNI-----VNLLGAC  110 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCe-----eeEEEEE
Confidence            35789999999999999999987533     346999998643  334567889999999996 8877     9999999


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHHhcC------------------------------------------------------
Q 024661          163 DYRNHICIVFEKL-GPSLYDFLRKNS------------------------------------------------------  187 (264)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~------------------------------------------------------  187 (264)
                      .+.+.+|+||||+ +|+|.+++....                                                      
T Consensus       111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (400)
T cd05105         111 TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP  190 (400)
T ss_pred             ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence            9999999999999 999999886431                                                      


Q ss_pred             ----------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEe
Q 024661          188 ----------------------------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL  227 (264)
Q Consensus       188 ----------------------------------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili  227 (264)
                                                              ...+++..+..++.||+.||.|||+++|+|+||||+|||+
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill  270 (400)
T cd05105         191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLL  270 (400)
T ss_pred             hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEE
Confidence                                                    1247788889999999999999999999999999999999


Q ss_pred             ecCCcEEeccCCCCCcCCC--------CcccceeeeeceeEee
Q 024661          228 VSAEYVKVPDYKVPSPRHA--------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       228 ~~~~~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~~  262 (264)
                      +.++.+||+|||++.....        ...++..|||||.+.+
T Consensus       271 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  313 (400)
T cd05105         271 AQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFD  313 (400)
T ss_pred             eCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcC
Confidence            9999999999999875321        2235567999997643

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.97  E-value=1.5e-29  Score=206.91  Aligned_cols=165  Identities=21%  Similarity=0.316  Sum_probs=143.5

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      .++|++.++||+|+||.||+|.+. ++..+++|.+.......+.+.+|+.+++.++|+++     +++++.+.+.+..++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~l   78 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKL-----VRLYAVVTKEEPIYI   78 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCe-----eeEEEEEcCCCCcEE
Confidence            367999999999999999999865 45679999887655556788999999999999887     999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC--
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF--  247 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~--  247 (264)
                      +|||+ +++|.+++.......+++..++.++.|++.||+|||+.+++|+||||+||+++.++.++|+|||++......  
T Consensus        79 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~  158 (261)
T cd05072          79 ITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY  158 (261)
T ss_pred             EEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCce
Confidence            99999 899999998765557899999999999999999999999999999999999999999999999999764321  


Q ss_pred             -----cccceeeeeceeEe
Q 024661          248 -----SFQTFLSMASRVYI  261 (264)
Q Consensus       248 -----~~~~~~y~ape~~~  261 (264)
                           ..++..|+|||.+.
T Consensus       159 ~~~~~~~~~~~y~aPE~~~  177 (261)
T cd05072         159 TAREGAKFPIKWTAPEAIN  177 (261)
T ss_pred             eccCCCccceecCCHHHhc
Confidence                 12345799999764

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.97  E-value=1.6e-29  Score=210.11  Aligned_cols=164  Identities=26%  Similarity=0.423  Sum_probs=142.8

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      ++|++.+.||.|++|.||+|.+..+++.|++|.+....  .....+.+|+++++.++|+++     +++++++.+.+..|
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~~~   79 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANI-----VTLHDIIHTKKTLT   79 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcce-----eeEEEEEecCCeEE
Confidence            67999999999999999999999899999999986432  223456789999999999887     99999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---
Q 024661          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---  246 (264)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---  246 (264)
                      +||||+.++|.+++.... ..+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||+++....   
T Consensus        80 lv~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~  158 (291)
T cd07844          80 LVFEYLDTDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK  158 (291)
T ss_pred             EEEecCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCc
Confidence            999999779999987654 3689999999999999999999999999999999999999999999999999865321   


Q ss_pred             ---CcccceeeeeceeEe
Q 024661          247 ---FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~  261 (264)
                         ...++..|+|||++.
T Consensus       159 ~~~~~~~~~~~~aPE~~~  176 (291)
T cd07844         159 TYSNEVVTLWYRPPDVLL  176 (291)
T ss_pred             cccccccccccCCcHHhh
Confidence               223567899999864

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=8.5e-31  Score=208.86  Aligned_cols=162  Identities=25%  Similarity=0.421  Sum_probs=140.2

Q ss_pred             CeEE-EeecccCccEEEEEEEeCCCCcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           93 RYRI-LSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        93 ~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      -|++ .+.||+|+|+.|-.|....+|.++|||++.+.. ..+.++.+|++++.+++.+    +|+++++++|+++..+||
T Consensus        78 ~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh----~nilqLiefFEdd~~FYL  153 (463)
T KOG0607|consen   78 MYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGH----KNILQLIEFFEDDTRFYL  153 (463)
T ss_pred             HHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCC----ccHHHHHHHhcccceEEE
Confidence            3555 357999999999999999999999999998764 4567889999999998743    445999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC---cEEeccCCCCCcCCC
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE---YVKVPDYKVPSPRHA  246 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~---~v~l~Dfg~a~~~~~  246 (264)
                      |||-+ ||+|...+.+++  .|++.++.++..+|+.||.|||.+||.|||+||+|||.....   -||||||.+..-.+.
T Consensus       154 VfEKm~GGplLshI~~~~--~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~  231 (463)
T KOG0607|consen  154 VFEKMRGGPLLSHIQKRK--HFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKL  231 (463)
T ss_pred             EEecccCchHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeecccccccccc
Confidence            99999 999999999887  799999999999999999999999999999999999998766   479999987653221


Q ss_pred             -------------CcccceeeeeceeE
Q 024661          247 -------------FSFQTFLSMASRVY  260 (264)
Q Consensus       247 -------------~~~~~~~y~ape~~  260 (264)
                                   ..+|...|||||++
T Consensus       232 ~~~~spastP~L~tPvGSAEfMAPEVV  258 (463)
T KOG0607|consen  232 NNDCSPASTPELLTPVGSAEFMAPEVV  258 (463)
T ss_pred             CCCCCCCCCccccCcccchhhcchhHH
Confidence                         23566679999975

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.97  E-value=6.3e-30  Score=211.70  Aligned_cols=163  Identities=28%  Similarity=0.448  Sum_probs=142.4

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      +|++.+.||+|+||.||+|.+..+|+.+++|.+....   .....+.+|+.+++.++|+|+     +++++++.+...+|
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i-----~~~~~~~~~~~~~~   75 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI-----VRLYDVLHSDKKLT   75 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCe-----eeHHHHhccCCceE
Confidence            5899999999999999999999999999999986432   223566789999999999887     99999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---
Q 024661          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---  246 (264)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---  246 (264)
                      +++||++++|.+++.... ..+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.....   
T Consensus        76 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~  154 (284)
T cd07839          76 LVFEYCDQDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR  154 (284)
T ss_pred             EEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC
Confidence            999999889999887643 3689999999999999999999999999999999999999999999999999875432   


Q ss_pred             ---CcccceeeeeceeEe
Q 024661          247 ---FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~  261 (264)
                         ...++..|+|||.+.
T Consensus       155 ~~~~~~~~~~y~aPE~~~  172 (284)
T cd07839         155 CYSAEVVTLWYRPPDVLF  172 (284)
T ss_pred             CcCCCccccCCcChHHHh
Confidence               224577899999764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=2.2e-29  Score=206.03  Aligned_cols=167  Identities=21%  Similarity=0.300  Sum_probs=143.9

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      ..++|++.+.||+|++|.||+|.+.. ++.|++|.++......+.+.+|+.+++.++|+|+     +++++++...+..|
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~   77 (261)
T cd05068           4 DRTSIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKL-----IQLYAVCTLEEPIY   77 (261)
T ss_pred             chhheeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCc-----cceeEEEecCCCee
Confidence            34679999999999999999999754 5679999987655556778899999999999888     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCCc
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS  248 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~~  248 (264)
                      ++||++ +++|.+++.......+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus        78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~  157 (261)
T cd05068          78 IVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDI  157 (261)
T ss_pred             eeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCc
Confidence            999999 9999999987554578999999999999999999999999999999999999999999999999987643221


Q ss_pred             -------ccceeeeeceeEee
Q 024661          249 -------FQTFLSMASRVYIC  262 (264)
Q Consensus       249 -------~~~~~y~ape~~~~  262 (264)
                             .....|++||.+.+
T Consensus       158 ~~~~~~~~~~~~y~aPE~~~~  178 (261)
T cd05068         158 YEAREGAKFPIKWTAPEAALY  178 (261)
T ss_pred             ccccCCCcCceeccCcccccc
Confidence                   12346999997653

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.97  E-value=1.9e-29  Score=232.60  Aligned_cols=173  Identities=24%  Similarity=0.420  Sum_probs=146.0

Q ss_pred             EeeCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEce
Q 024661           84 FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (264)
Q Consensus        84 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~  160 (264)
                      +..++...++|++++.||+|+||.||+|.+..++..+|+|++...   ......+..|+.+++.+.|+++     +++++
T Consensus         5 ~~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNI-----Vrl~d   79 (1021)
T PTZ00266          5 YDDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNI-----VRYID   79 (1021)
T ss_pred             ccCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCc-----CeEEE
Confidence            445667778999999999999999999999999999999998742   3445678899999999999988     99999


Q ss_pred             eeee--CCEEEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC-------CCeecCCCCCCEEee
Q 024661          161 WFDY--RNHICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHEL-------RLIHTDLKPENILLV  228 (264)
Q Consensus       161 ~~~~--~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~-------~ivH~dikp~Nili~  228 (264)
                      +|.+  ...+||||||+ +++|.++|...  ....+++..++.|+.||+.||.|||+.       +|||+||||+||||+
T Consensus        80 ~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~  159 (1021)
T PTZ00266         80 RFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLS  159 (1021)
T ss_pred             EEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEee
Confidence            8855  46799999999 89999999753  123699999999999999999999984       499999999999996


Q ss_pred             cC-----------------CcEEeccCCCCCcCC-----CCcccceeeeeceeEe
Q 024661          229 SA-----------------EYVKVPDYKVPSPRH-----AFSFQTFLSMASRVYI  261 (264)
Q Consensus       229 ~~-----------------~~v~l~Dfg~a~~~~-----~~~~~~~~y~ape~~~  261 (264)
                      .+                 +.+||+|||++....     ....+|..|||||++.
T Consensus       160 s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~  214 (1021)
T PTZ00266        160 TGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLL  214 (1021)
T ss_pred             cCccccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHh
Confidence            53                 348999999997643     2335889999999874

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.97  E-value=4.4e-29  Score=206.85  Aligned_cols=173  Identities=23%  Similarity=0.358  Sum_probs=145.7

Q ss_pred             EeeCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHH-hccCCCCcceEEEceee
Q 024661           84 FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWF  162 (264)
Q Consensus        84 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~  162 (264)
                      +.......++|++.+.||+|+||.||+|.+..+++.+++|++.........+.+|+.+++.+ .|+|+     +++++++
T Consensus        10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i-----~~~~~~~   84 (286)
T cd06638          10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNV-----VKFYGMY   84 (286)
T ss_pred             eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCe-----eeeeeee
Confidence            34444566889999999999999999999999999999998875444456778899999999 58877     9998877


Q ss_pred             e-----eCCEEEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEE
Q 024661          163 D-----YRNHICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK  234 (264)
Q Consensus       163 ~-----~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~  234 (264)
                      .     ..+.+++||||+ +++|.+++...  ....+++..+..++.|++.||.|||+++++|+||||+||+++.++.++
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~k  164 (286)
T cd06638          85 YKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVK  164 (286)
T ss_pred             eecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEE
Confidence            3     456799999999 89999987632  224688999999999999999999999999999999999999999999


Q ss_pred             eccCCCCCcCCC------CcccceeeeeceeEe
Q 024661          235 VPDYKVPSPRHA------FSFQTFLSMASRVYI  261 (264)
Q Consensus       235 l~Dfg~a~~~~~------~~~~~~~y~ape~~~  261 (264)
                      |+|||++.....      ...++..|+|||++.
T Consensus       165 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~  197 (286)
T cd06638         165 LVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIA  197 (286)
T ss_pred             EccCCceeecccCCCccccccCCCcccChhhhc
Confidence            999999865322      234778899999875

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.97  E-value=3.1e-29  Score=208.50  Aligned_cols=166  Identities=25%  Similarity=0.422  Sum_probs=144.7

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ..+.|+++++||.|+||.||+|.+..+++.+++|.+... ....+.+.+|+.+++.+.|+++     +++++.+..++.+
T Consensus        10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~   84 (292)
T cd06644          10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYI-----VKLLGAFYWDGKL   84 (292)
T ss_pred             cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcE-----eeeEEEEEeCCeE
Confidence            346799999999999999999999999999999998743 3445678889999999999887     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-  246 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-  246 (264)
                      |+||||+ +++|..++.+.. ..+++..+..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||++..... 
T Consensus        85 ~lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~  163 (292)
T cd06644          85 WIMIEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT  163 (292)
T ss_pred             EEEEecCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccc
Confidence            9999999 888988876543 3689999999999999999999999999999999999999999999999998865322 


Q ss_pred             -----CcccceeeeeceeEe
Q 024661          247 -----FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 -----~~~~~~~y~ape~~~  261 (264)
                           ...++..|+|||++.
T Consensus       164 ~~~~~~~~~~~~y~aPE~~~  183 (292)
T cd06644         164 LQRRDSFIGTPYWMAPEVVM  183 (292)
T ss_pred             ccccceecCCccccCceeec
Confidence                 224677899999874

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.97  E-value=3.7e-29  Score=207.91  Aligned_cols=165  Identities=24%  Similarity=0.382  Sum_probs=142.2

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      ++|.+.+.||+|+||.||+|.+..+++.+++|++....  .....+.+|+.+++.+.|+|+     +++++++.+++..|
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-----~~~~~~~~~~~~~~   79 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANI-----VLLHDIIHTKETLT   79 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCE-----eEEEEEEecCCeEE
Confidence            67999999999999999999999999999999986432  223456789999999999887     99999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---
Q 024661          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---  246 (264)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---  246 (264)
                      +||||++++|.+++.... ..+.+..+..++.|++.||.|||++||+|+||||+|||++.++.++|+|||+++....   
T Consensus        80 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~  158 (291)
T cd07870          80 FVFEYMHTDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ  158 (291)
T ss_pred             EEEecccCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCC
Confidence            999999888888876543 3578888999999999999999999999999999999999999999999999875321   


Q ss_pred             ---CcccceeeeeceeEee
Q 024661          247 ---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~~  262 (264)
                         ...++..|+|||.+.+
T Consensus       159 ~~~~~~~~~~y~aPE~~~~  177 (291)
T cd07870         159 TYSSEVVTLWYRPPDVLLG  177 (291)
T ss_pred             CCCCccccccccCCceeec
Confidence               2235778999998753

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.97  E-value=3.8e-29  Score=228.80  Aligned_cols=161  Identities=20%  Similarity=0.317  Sum_probs=143.2

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|.+.++||+|+||.||+|.+..+++.||+|+++...    .....+..|+.+++.++|+++     +.+++.+.....
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~I-----v~~~~~~~~~~~   78 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFI-----VHLYYSLQSANN   78 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCc-----CeEEEEEEECCE
Confidence            57999999999999999999999999999999987532    334677889999999999888     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      +|+||||+ +++|.+++....  .+++..++.|+.||+.||+|||.+||+||||||+|||++.++.++|+|||+++....
T Consensus        79 ~~lVmEy~~g~~L~~li~~~~--~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~~  156 (669)
T cd05610          79 VYLVMEYLIGGDVKSLLHIYG--YFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLN  156 (669)
T ss_pred             EEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCccccC
Confidence            99999999 999999998754  689999999999999999999999999999999999999999999999999986432


Q ss_pred             ------Ccccceeeeecee
Q 024661          247 ------FSFQTFLSMASRV  259 (264)
Q Consensus       247 ------~~~~~~~y~ape~  259 (264)
                            ...+|..|++||.
T Consensus       157 ~~~~~~~~~~t~~~~~pe~  175 (669)
T cd05610         157 RELNMMDILTTPSMAKPKN  175 (669)
T ss_pred             CcccccccccCccccCccc
Confidence                  3357778888874

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.97  E-value=9.7e-30  Score=208.75  Aligned_cols=162  Identities=24%  Similarity=0.341  Sum_probs=143.7

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      ++|.+.+.||+|+||.||+|.+..+++.+++|+++... .....+.+|+.+++.++|+++     +++++.+...+.+|+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~i-----i~~~~~~~~~~~~~l   83 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNI-----VAYFGSYLRRDKLWI   83 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCe-----eeEEEEEEeCCEEEE
Confidence            57999999999999999999999999999999987543 334567789999999998888     999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC----
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH----  245 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~----  245 (264)
                      ||||+ +++|.+++....  .+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++....    
T Consensus        84 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd06645          84 CMEFCGGGSLQDIYHVTG--PLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIA  161 (267)
T ss_pred             EEeccCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCccc
Confidence            99999 889999988765  79999999999999999999999999999999999999999999999999986432    


Q ss_pred             --CCcccceeeeeceeE
Q 024661          246 --AFSFQTFLSMASRVY  260 (264)
Q Consensus       246 --~~~~~~~~y~ape~~  260 (264)
                        ....++..|+|||++
T Consensus       162 ~~~~~~~~~~y~aPE~~  178 (267)
T cd06645         162 KRKSFIGTPYWMAPEVA  178 (267)
T ss_pred             ccccccCcccccChhhh
Confidence              233578899999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=4.4e-29  Score=204.29  Aligned_cols=164  Identities=29%  Similarity=0.373  Sum_probs=143.6

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh------hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      +.|.+.+.||+|++|.||+|.+..+++.+++|.+....      .....+.+|+++++.+.|+++     +++++++.++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~   76 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERI-----VQYYGCLRDD   76 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCe-----eeeEEEEccC
Confidence            45899999999999999999999999999999886321      223567889999999999888     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      +.+++|||++ +++|.+++....  .+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++...
T Consensus        77 ~~~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~  154 (263)
T cd06625          77 ETLSIFMEYMPGGSVKDQLKAYG--ALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRL  154 (263)
T ss_pred             CeEEEEEEECCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceec
Confidence            9999999999 899999998765  6899999999999999999999999999999999999999999999999998643


Q ss_pred             CC---------CcccceeeeeceeEee
Q 024661          245 HA---------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       245 ~~---------~~~~~~~y~ape~~~~  262 (264)
                      ..         ...++..|+|||++.+
T Consensus       155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~  181 (263)
T cd06625         155 QTICSSGTGMKSVTGTPYWMSPEVISG  181 (263)
T ss_pred             cccccccccccCCCcCccccCcceecc
Confidence            22         2235678999998764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.97  E-value=5.8e-29  Score=202.85  Aligned_cols=165  Identities=26%  Similarity=0.350  Sum_probs=146.2

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      +|++.+.||.|+||.||.+++..+++.+++|.+...   ......+.+|++++++++|+|+     +++++++.+.+.++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~~~~~~   75 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNI-----IAYYNHFMDDNTLL   75 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCe-----eEEEeEEecCCeEE
Confidence            589999999999999999999999999999987642   3445678899999999998887     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC--
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA--  246 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~--  246 (264)
                      ++|||+ +++|.+++.......+++..+..++.|++.+|.|||+.|++|+||+|+||+++.++.+||+|||++.....  
T Consensus        76 ~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~  155 (256)
T cd08221          76 IEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY  155 (256)
T ss_pred             EEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence            999999 89999999876445789999999999999999999999999999999999999999999999999875432  


Q ss_pred             ----CcccceeeeeceeEee
Q 024661          247 ----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ----~~~~~~~y~ape~~~~  262 (264)
                          ...++..|+|||.+.+
T Consensus       156 ~~~~~~~~~~~y~ape~~~~  175 (256)
T cd08221         156 SMAETVVGTPYYMSPELCQG  175 (256)
T ss_pred             ccccccCCCccccCHhhcCC
Confidence                2347888999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.96  E-value=6.1e-29  Score=202.57  Aligned_cols=164  Identities=26%  Similarity=0.359  Sum_probs=145.1

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      .|.+.+.||+|++|.||+|.+..+++.+++|.+...   ......+.+|+++++.++|+|+     +++++++...+..|
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~   75 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYI-----IRYYESFLDKGKLN   75 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCe-----ehheeeeccCCEEE
Confidence            388899999999999999999999999999998642   3456778889999999999888     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC-
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF-  247 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~-  247 (264)
                      +||||+ +++|.+++.......+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++...... 
T Consensus        76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~  155 (256)
T cd08529          76 IVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT  155 (256)
T ss_pred             EEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence            999999 899999998764457899999999999999999999999999999999999999999999999998754322 


Q ss_pred             -----cccceeeeeceeEe
Q 024661          248 -----SFQTFLSMASRVYI  261 (264)
Q Consensus       248 -----~~~~~~y~ape~~~  261 (264)
                           ..++..|+|||++.
T Consensus       156 ~~~~~~~~~~~y~aPE~~~  174 (256)
T cd08529         156 NFANTIVGTPYYLSPELCE  174 (256)
T ss_pred             chhhccccCccccCHHHhc
Confidence                 24677899999864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=3.6e-29  Score=210.44  Aligned_cols=147  Identities=20%  Similarity=0.412  Sum_probs=133.4

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++.+.||+|++|.||+|.+..+++.+++|.+....    .....+..|+++++.+.|+++     +++++.+.+...
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~   75 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFL-----PTLYASFQTETY   75 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCc-----hhheeeeecCCE
Confidence            36999999999999999999999999999999987532    244567889999999998887     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      .|++|||+ +++|.+++.......+++..+..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||++..
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~  152 (316)
T cd05574          76 LCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQ  152 (316)
T ss_pred             EEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhc
Confidence            99999999 89999999876555799999999999999999999999999999999999999999999999998764

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.96  E-value=5.2e-29  Score=205.91  Aligned_cols=159  Identities=21%  Similarity=0.317  Sum_probs=139.4

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      +|++.+.||+|+||.||+|.+..+++.+|+|.+...  ......+.+|+++++.+.|+++     +.+++.+...+..++
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~l   76 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYI-----IGFYGAFFVENRISI   76 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCe-----eeEEEEEEECCEEEE
Confidence            588899999999999999999999999999998643  2344678899999999999888     999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC----
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH----  245 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~----  245 (264)
                      ||||+ +++|..+.      .+++..+..++.|++.||.|||+.||+|+||||+|||++.++.++|+|||++....    
T Consensus        77 v~e~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~  150 (279)
T cd06619          77 CTEFMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIA  150 (279)
T ss_pred             EEecCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccc
Confidence            99999 88886542      47888999999999999999999999999999999999999999999999987532    


Q ss_pred             CCcccceeeeeceeEee
Q 024661          246 AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~~~~~~~~y~ape~~~~  262 (264)
                      ....++..|+|||.+.+
T Consensus       151 ~~~~~~~~y~aPE~~~~  167 (279)
T cd06619         151 KTYVGTNAYMAPERISG  167 (279)
T ss_pred             cCCCCChhhcCceeecC
Confidence            23457889999998753

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.96  E-value=4e-29  Score=203.93  Aligned_cols=163  Identities=21%  Similarity=0.280  Sum_probs=140.5

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      +.|++.+.||+|+||.||++.+.. +..+++|.+.........+.+|+.+++.++|+++     +++++++...+..|+|
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~iv   77 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKL-----VQLYGVCTQQKPLYIV   77 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCccHHHHHHHHHHHHHCCCCCc-----eeEEEEEccCCCEEEE
Confidence            458999999999999999998754 4579999887655556678889999999999888     9999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCCc--
Q 024661          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS--  248 (264)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~~--  248 (264)
                      |||+ +++|.+++.... ..+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||.++......  
T Consensus        78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~  156 (256)
T cd05114          78 TEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT  156 (256)
T ss_pred             EEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCcee
Confidence            9999 899999987644 258999999999999999999999999999999999999999999999999987543211  


Q ss_pred             -----ccceeeeeceeEe
Q 024661          249 -----FQTFLSMASRVYI  261 (264)
Q Consensus       249 -----~~~~~y~ape~~~  261 (264)
                           .++..|+|||.+.
T Consensus       157 ~~~~~~~~~~y~aPE~~~  174 (256)
T cd05114         157 SSSGAKFPVKWSPPEVFN  174 (256)
T ss_pred             ccCCCCCchhhCChhhcc
Confidence                 2344699999865

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.96  E-value=1.5e-29  Score=212.76  Aligned_cols=160  Identities=23%  Similarity=0.380  Sum_probs=132.3

Q ss_pred             EeecccCccEEEEEEEeC--CCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee--CCEEEEEE
Q 024661           97 LSKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--RNHICIVF  172 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~--~~~~~lv~  172 (264)
                      +.+||+|+||.||+|.++  .+++.+|+|.+.... ......+|+.+++.++|+|+     +++++.+..  +..+|++|
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~~~~~lv~   79 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-ISMSACREIALLRELKHPNV-----ISLQKVFLSHADRKVWLLF   79 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-CcHHHHHHHHHHHhcCCCCC-----cceeeeEecCCCcEEEEEE
Confidence            468999999999999965  467889999886432 23457789999999999988     899888854  56789999


Q ss_pred             ecCCCCHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEee----cCCcEEeccCCCC
Q 024661          173 EKLGPSLYDFLRKNS-------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV----SAEYVKVPDYKVP  241 (264)
Q Consensus       173 e~~~~~L~~~l~~~~-------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~----~~~~v~l~Dfg~a  241 (264)
                      ||++++|.+++....       ...+++..++.++.||+.||.|||++||+||||||+|||++    .++.+||+|||++
T Consensus        80 e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07868          80 DYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             eccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence            999889999886421       23588999999999999999999999999999999999994    5578999999999


Q ss_pred             CcCCC---------CcccceeeeeceeEee
Q 024661          242 SPRHA---------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       242 ~~~~~---------~~~~~~~y~ape~~~~  262 (264)
                      .....         ...+|..|||||++.+
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  189 (317)
T cd07868         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLG  189 (317)
T ss_pred             eccCCCCccccccCCccccccccCCHHHcC
Confidence            75322         2346888999998754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.96  E-value=4.9e-29  Score=207.85  Aligned_cols=165  Identities=25%  Similarity=0.339  Sum_probs=144.4

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ...+|++.+.||+|+||.||+|.+..+++.+++|.+.... ...+.+.+|+.+++.+.|+|+     +.+++.+......
T Consensus        18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v-----~~~~~~~~~~~~~   92 (296)
T cd06654          18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI-----VNYLDSYLVGDEL   92 (296)
T ss_pred             cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCE-----eeEEEEEEeCCEE
Confidence            3468999999999999999999999999999999887432 334677889999999998887     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-  246 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-  246 (264)
                      |+||||+ +++|.+++...   .+++..+..++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++..... 
T Consensus        93 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~  169 (296)
T cd06654          93 WVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE  169 (296)
T ss_pred             EEeecccCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhcccc
Confidence            9999999 89999998754   488999999999999999999999999999999999999999999999999875322 


Q ss_pred             -----CcccceeeeeceeEee
Q 024661          247 -----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 -----~~~~~~~y~ape~~~~  262 (264)
                           ...++..|+|||.+.+
T Consensus       170 ~~~~~~~~~~~~y~aPE~~~~  190 (296)
T cd06654         170 QSKRSTMVGTPYWMAPEVVTR  190 (296)
T ss_pred             ccccCcccCCccccCHHHHcC
Confidence                 2357788999997643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.96  E-value=2.7e-29  Score=211.27  Aligned_cols=163  Identities=20%  Similarity=0.283  Sum_probs=138.0

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcE----EEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKEL----VAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~----vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .+|++.+.||+|+||.||+|.+..+++.    ||+|+++..  ....+.+.+|+.+++.+.|+|+     +++++++...
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-----v~~~g~~~~~   81 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV-----CRLLGICLTS   81 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEcCC
Confidence            5699999999999999999998766553    899988643  3445678899999999999988     9999988764


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                       ..++++|++ +|+|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus        82 -~~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~  159 (316)
T cd05108          82 -TVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLL  159 (316)
T ss_pred             -CceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccc
Confidence             577899999 999999998754 35889999999999999999999999999999999999999999999999999864


Q ss_pred             CCC--------cccceeeeeceeEe
Q 024661          245 HAF--------SFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~~~--------~~~~~~y~ape~~~  261 (264)
                      ...        ...+..||+||.+.
T Consensus       160 ~~~~~~~~~~~~~~~~~y~apE~~~  184 (316)
T cd05108         160 GADEKEYHAEGGKVPIKWMALESIL  184 (316)
T ss_pred             cCCCcceeccCCccceeecChHHhc
Confidence            321        12345799999764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=8.5e-29  Score=202.38  Aligned_cols=165  Identities=30%  Similarity=0.378  Sum_probs=145.6

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      ++|++.+.||.|+||.||+|.+..+++.+++|++.... ...+.+.+|+++++.++|+++     +++++.+.+.+.+|+
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~~~~~~l   77 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNI-----VAYFGSYLRRDKLWI   77 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCCh-----hceEEEEEeCCEEEE
Confidence            57999999999999999999999899999999987532 345778899999999999988     999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---  246 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---  246 (264)
                      +|||+ +++|.+++.... ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.....   
T Consensus        78 ~~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~  156 (262)
T cd06613          78 VMEYCGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA  156 (262)
T ss_pred             EEeCCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhh
Confidence            99999 889999987652 3689999999999999999999999999999999999999999999999999875432   


Q ss_pred             ---CcccceeeeeceeEee
Q 024661          247 ---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~~  262 (264)
                         ...++..|++||.+.+
T Consensus       157 ~~~~~~~~~~y~~Pe~~~~  175 (262)
T cd06613         157 KRKSFIGTPYWMAPEVAAV  175 (262)
T ss_pred             ccccccCCccccCchhhcc
Confidence               2246778999998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.96  E-value=6.4e-29  Score=203.84  Aligned_cols=165  Identities=25%  Similarity=0.318  Sum_probs=143.1

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEec----hhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++.+.||+|+||.||+|++..+++.+++|.+..    .......+.+|+++++.++|+++     +++++++.+.+.
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~   76 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNV-----IKYLDSFIEDNE   76 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcce-----eeeeeeEEECCe
Confidence            579999999999999999999999999999998753    23445567889999999999888     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          168 ICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      .+++|||+ +++|.+++...  ....+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++...
T Consensus        77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~  156 (267)
T cd08228          77 LNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF  156 (267)
T ss_pred             EEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceec
Confidence            99999999 88999988642  2235889999999999999999999999999999999999999999999999998764


Q ss_pred             CC------CcccceeeeeceeEe
Q 024661          245 HA------FSFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~~------~~~~~~~y~ape~~~  261 (264)
                      ..      ...++..|+|||.+.
T Consensus       157 ~~~~~~~~~~~~~~~~~aPE~~~  179 (267)
T cd08228         157 SSKTTAAHSLVGTPYYMSPERIH  179 (267)
T ss_pred             cchhHHHhcCCCCccccChhhhc
Confidence            32      234677899999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.96  E-value=3.8e-29  Score=208.46  Aligned_cols=163  Identities=26%  Similarity=0.397  Sum_probs=142.6

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh------hHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK------YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      +|++.+.||+|++|.||+|.+..+++.|++|.+.....      ....+..|+++++.++|+++     +++++++.+.+
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~~~   75 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNI-----IGLLDVFGHKS   75 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCC-----hhhhheeecCC
Confidence            48899999999999999999999999999999874322      24556789999999999888     99999999999


Q ss_pred             EEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          167 HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       167 ~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      ..++||||++++|.+++.... ..+++..++.++.||++||.|||++|++|+||+|+||+++.++.++|+|||++.....
T Consensus        76 ~~~lv~e~~~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~  154 (298)
T cd07841          76 NINLVFEFMETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGS  154 (298)
T ss_pred             EEEEEEcccCCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence            999999999889999997653 3689999999999999999999999999999999999999999999999999875432


Q ss_pred             ------CcccceeeeeceeEe
Q 024661          247 ------FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ------~~~~~~~y~ape~~~  261 (264)
                            ...++..|+|||.+.
T Consensus       155 ~~~~~~~~~~~~~y~aPE~~~  175 (298)
T cd07841         155 PNRKMTHQVVTRWYRAPELLF  175 (298)
T ss_pred             CCccccccccceeeeCHHHHh
Confidence                  223567899999763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.96  E-value=4.6e-29  Score=203.02  Aligned_cols=158  Identities=19%  Similarity=0.306  Sum_probs=136.4

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  175 (264)
                      +.||+|+||.||+|.+..+++.+++|.+...  ......+.+|+++++.+.|+++     +++++++......|+||||+
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~lv~e~~   75 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNI-----VRLIGVCTQKQPIYIVMELV   75 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEcCCCCeEEEEeec
Confidence            4699999999999999999999999987643  3345678899999999999888     99999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCCc------
Q 024661          176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS------  248 (264)
Q Consensus       176 -~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~~------  248 (264)
                       +++|.+++.... ..+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.......      
T Consensus        76 ~~~~L~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  154 (252)
T cd05084          76 QGGDFLTFLRTEG-PRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGG  154 (252)
T ss_pred             cCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCC
Confidence             899999997543 358999999999999999999999999999999999999999999999999987543221      


Q ss_pred             --ccceeeeeceeEe
Q 024661          249 --FQTFLSMASRVYI  261 (264)
Q Consensus       249 --~~~~~y~ape~~~  261 (264)
                        ..+..|+|||.+.
T Consensus       155 ~~~~~~~y~aPE~~~  169 (252)
T cd05084         155 MKQIPVKWTAPEALN  169 (252)
T ss_pred             CCCCceeecCchhhc
Confidence              1234699999764

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.96  E-value=4.8e-29  Score=206.49  Aligned_cols=164  Identities=28%  Similarity=0.448  Sum_probs=140.8

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ++|++.+.||+|++|.||+|.+..+++.+++|++....   ...+.+.+|+.+++.+.|+|+     +++++.+......
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~~~~~   75 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNL-----VNLIEVFRRKRKL   75 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCE-----eeeeeEEeeCCEE
Confidence            46999999999999999999999999999999886432   234567889999999998887     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF  247 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~  247 (264)
                      ++||||+ ++.|..++....  .+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus        76 ~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  153 (286)
T cd07847          76 HLVFEYCDHTVLNELEKNPR--GVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGP  153 (286)
T ss_pred             EEEEeccCccHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence            9999999 666666555433  6899999999999999999999999999999999999999999999999999764332


Q ss_pred             ------cccceeeeeceeEee
Q 024661          248 ------SFQTFLSMASRVYIC  262 (264)
Q Consensus       248 ------~~~~~~y~ape~~~~  262 (264)
                            ..++..|+|||++.+
T Consensus       154 ~~~~~~~~~~~~~~aPE~~~~  174 (286)
T cd07847         154 GDDYTDYVATRWYRAPELLVG  174 (286)
T ss_pred             cccccCcccccccCCHHHHhC
Confidence                  246678999998643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2.2e-29  Score=208.07  Aligned_cols=164  Identities=30%  Similarity=0.441  Sum_probs=144.6

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      ++|++.+.||.|+||.||+|.+..++..+++|++... ....+.+.+|+++++.++|+++     +++++.+......|+
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~l   79 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNI-----VGLYEAYFYENKLWI   79 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCce-----eEEEEEEecCCeEEE
Confidence            5699999999999999999999889999999998743 3445678889999999998887     999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---  246 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---  246 (264)
                      ||||+ +++|.+++.... ..+++..++.++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++.....   
T Consensus        80 v~e~~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~  158 (280)
T cd06611          80 LIEFCDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ  158 (280)
T ss_pred             EeeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccccc
Confidence            99999 889999987653 3689999999999999999999999999999999999999999999999998865332   


Q ss_pred             ---CcccceeeeeceeEe
Q 024661          247 ---FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~  261 (264)
                         ...++..|++||++.
T Consensus       159 ~~~~~~~~~~y~~PE~~~  176 (280)
T cd06611         159 KRDTFIGTPYWMAPEVVA  176 (280)
T ss_pred             ccceeecchhhcCHHHHh
Confidence               224678899999864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=5.7e-30  Score=221.95  Aligned_cols=156  Identities=24%  Similarity=0.355  Sum_probs=141.4

Q ss_pred             ecccCccEEEEEEEeCCCCcEEEEEEEe-chhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC-C
Q 024661           99 KMGEGTFGQVVECFDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-G  176 (264)
Q Consensus        99 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~-~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~  176 (264)
                      +||.|.||+||-|++..+...+|||.+. +.....+.+++|+.+.++++|.||     |++++.+..++++-|.||-+ |
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNI-----VrYLGs~senGf~kIFMEqVPG  656 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNI-----VRYLGSVSENGFFKIFMEQVPG  656 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhH-----HHHhhccCCCCeEEEEeecCCC
Confidence            6999999999999999999999999886 445677889999999999999999     99999999999999999999 9


Q ss_pred             CCHHHHHHhcCCCCC--CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEee-cCCcEEeccCCCCCcC------CCC
Q 024661          177 PSLYDFLRKNSYRSF--PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV-SAEYVKVPDYKVPSPR------HAF  247 (264)
Q Consensus       177 ~~L~~~l~~~~~~~~--~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~-~~~~v~l~Dfg~a~~~------~~~  247 (264)
                      |+|.++++.. +.++  +|..+-.|..||++||.|||++.|||||||-+|+||+ ..|.+||+|||.+...      .+.
T Consensus       657 GSLSsLLrsk-WGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TET  735 (1226)
T KOG4279|consen  657 GSLSSLLRSK-WGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTET  735 (1226)
T ss_pred             CcHHHHHHhc-cCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCccccc
Confidence            9999999865 3566  8999999999999999999999999999999999998 5799999999988753      345


Q ss_pred             cccceeeeeceeE
Q 024661          248 SFQTFLSMASRVY  260 (264)
Q Consensus       248 ~~~~~~y~ape~~  260 (264)
                      ..||..|||||++
T Consensus       736 FTGTLQYMAPEvI  748 (1226)
T KOG4279|consen  736 FTGTLQYMAPEVI  748 (1226)
T ss_pred             cccchhhhChHhh
Confidence            5689999999985

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.96  E-value=4.5e-29  Score=204.45  Aligned_cols=164  Identities=24%  Similarity=0.318  Sum_probs=139.1

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      .++|++.++||+|+||.||+|.+..++ .+++|.++......+.+.+|+++++.+.|+++     +++++.+. +...|+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i-----~~~~~~~~-~~~~~l   77 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL-----VQLYAVVS-EEPIYI   77 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCccCHHHHHHHHHHHHhCCCCCc-----ceEEEEEC-CCCcEE
Confidence            467999999999999999999987654 59999988655555678899999999999887     88888764 456899


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCCc-
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS-  248 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~~-  248 (264)
                      ||||+ +++|.+++.......+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||.+....... 
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~  157 (262)
T cd05071          78 VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY  157 (262)
T ss_pred             EEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccc
Confidence            99999 8899999987544468999999999999999999999999999999999999999999999999987543221 


Q ss_pred             ------ccceeeeeceeEe
Q 024661          249 ------FQTFLSMASRVYI  261 (264)
Q Consensus       249 ------~~~~~y~ape~~~  261 (264)
                            .++..|++||.+.
T Consensus       158 ~~~~~~~~~~~y~~PE~~~  176 (262)
T cd05071         158 TARQGAKFPIKWTAPEAAL  176 (262)
T ss_pred             ccccCCcccceecCHhHhc
Confidence                  2345699999764

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=9.9e-31  Score=214.93  Aligned_cols=164  Identities=23%  Similarity=0.317  Sum_probs=142.1

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      .+|..+.+||.|+||+|.+|..+.+.+.+|||++++.-    ...+..+.|-++|.-...+    +.+++++.+|+.-+.
T Consensus       349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kp----pFL~qlHScFQTmDR  424 (683)
T KOG0696|consen  349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKP----PFLVQLHSCFQTMDR  424 (683)
T ss_pred             cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCC----chHHHHHHHhhhhhh
Confidence            56899999999999999999999999999999998642    2233445566666554444    567999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC--
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR--  244 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~--  244 (264)
                      +|+||||+ ||+|.-.+++..  .+.|..+..|+.+|+-||-|||++||+.||||.+|||++.+|++||+|||++...  
T Consensus       425 LyFVMEyvnGGDLMyhiQQ~G--kFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~  502 (683)
T KOG0696|consen  425 LYFVMEYVNGGDLMYHIQQVG--KFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF  502 (683)
T ss_pred             eeeEEEEecCchhhhHHHHhc--ccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccccccc
Confidence            99999999 999999998876  8999999999999999999999999999999999999999999999999999752  


Q ss_pred             ----CCCcccceeeeeceeEe
Q 024661          245 ----HAFSFQTFLSMASRVYI  261 (264)
Q Consensus       245 ----~~~~~~~~~y~ape~~~  261 (264)
                          ....+||+.|||||+++
T Consensus       503 ~~~TTkTFCGTPdYiAPEIi~  523 (683)
T KOG0696|consen  503 DGVTTKTFCGTPDYIAPEIIA  523 (683)
T ss_pred             CCcceeeecCCCcccccceEE
Confidence                23557999999999875

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.96  E-value=8.4e-29  Score=203.04  Aligned_cols=164  Identities=28%  Similarity=0.405  Sum_probs=141.1

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech------hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee-
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI------NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-  164 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~-  164 (264)
                      ..|++.+.||+|+||.||+|.+..+++.|++|.+...      ....+.+.+|+.+++.+.|+++     +++++++.+ 
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~   76 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERI-----VQYYGCLRDP   76 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCe-----eeEEeEeccC
Confidence            4699999999999999999999999999999987532      1234577889999999999888     999998876 


Q ss_pred             -CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          165 -RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       165 -~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                       ...++++|||+ +++|.+++.+..  .+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++.
T Consensus        77 ~~~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~  154 (265)
T cd06652          77 MERTLSIFMEHMPGGSIKDQLKSYG--ALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASK  154 (265)
T ss_pred             CCceEEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccc
Confidence             35789999999 899999998764  68899999999999999999999999999999999999999999999999987


Q ss_pred             cCCC---------CcccceeeeeceeEee
Q 024661          243 PRHA---------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       243 ~~~~---------~~~~~~~y~ape~~~~  262 (264)
                      ....         ...++..|+|||.+.+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  183 (265)
T cd06652         155 RLQTICLSGTGMKSVTGTPYWMSPEVISG  183 (265)
T ss_pred             ccccccccccccccCCCCccccChhhhcC
Confidence            5321         2246778999998653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.96  E-value=3.5e-29  Score=210.72  Aligned_cols=190  Identities=28%  Similarity=0.501  Sum_probs=166.9

Q ss_pred             CCCCCCCceEEeeCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCC-CC
Q 024661           74 RPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI-GG  152 (264)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~-~~  152 (264)
                      ..++..+.|.+.+|+.+.++|.+....|.|-|++|..|.+...|..||||+|..++.....-..|+++|+.|....- ..
T Consensus       414 NWdDaEGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk  493 (752)
T KOG0670|consen  414 NWDDAEGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDK  493 (752)
T ss_pred             CcccccceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhh
Confidence            34555678999999999999999999999999999999999999999999999877777777899999999986542 23


Q ss_pred             cceEEEceeeeeCCEEEEEEecCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC
Q 024661          153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNS-YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (264)
Q Consensus       153 ~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~  231 (264)
                      .++++++..|...+++|||+|-+.-+|.++|++.+ +.++....++.|+.|++.||..|..+||+|.||||+|||+++..
T Consensus       494 ~Hclrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k  573 (752)
T KOG0670|consen  494 FHCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESK  573 (752)
T ss_pred             hHHHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCc
Confidence            46689999999999999999999999999999653 45688899999999999999999999999999999999999764


Q ss_pred             -cEEeccCCCCCcCCCCcccc----eeeeeceeEeec
Q 024661          232 -YVKVPDYKVPSPRHAFSFQT----FLSMASRVYICI  263 (264)
Q Consensus       232 -~v~l~Dfg~a~~~~~~~~~~----~~y~ape~~~~~  263 (264)
                       .+||||||.|.......+-.    ..|-|||+++|+
T Consensus       574 ~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~  610 (752)
T KOG0670|consen  574 NILKLCDFGSASFASENEITPYLVSRFYRAPEIILGL  610 (752)
T ss_pred             ceeeeccCccccccccccccHHHHHHhccCcceeecC
Confidence             68999999998877765543    359999999885

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.96  E-value=4.4e-29  Score=210.97  Aligned_cols=161  Identities=16%  Similarity=0.197  Sum_probs=138.4

Q ss_pred             EEeecccC--ccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           96 ILSKMGEG--TFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        96 ~~~~lg~G--~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      ++++||+|  +|++||++.++.+|+.||+|.++..   ....+.+.+|+++++.++|+|+     +++++++..++..|+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpni-----v~~~~~~~~~~~~~l   76 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNI-----VPYRATFIADNELWV   76 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCe-----eeEEEEEEECCEEEE
Confidence            46789999  6899999999999999999998743   2344567789999999999988     999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC----
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH----  245 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~----  245 (264)
                      ||||+ +++|.+++.......+++..++.++.|++.||+|||++||+||||||+|||++.++.++++||+.+....    
T Consensus        77 v~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~  156 (327)
T cd08227          77 VTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ  156 (327)
T ss_pred             EEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence            99999 8999999976543468999999999999999999999999999999999999999999999998653321    


Q ss_pred             ---------CCcccceeeeeceeEe
Q 024661          246 ---------AFSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ---------~~~~~~~~y~ape~~~  261 (264)
                               ....++..|||||++.
T Consensus       157 ~~~~~~~~~~~~~~~~~y~aPE~~~  181 (327)
T cd08227         157 RLRVVHDFPKYSVKVLPWLSPEVLQ  181 (327)
T ss_pred             cccccccccccccceecccChHHhh
Confidence                     1224566799999875

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.96  E-value=1.2e-28  Score=206.25  Aligned_cols=164  Identities=21%  Similarity=0.390  Sum_probs=142.5

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++.+.||.|+||.||++.+..+++.|++|.+....    .....+.+|+++++.++|+|+     +++++.+..+++
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~   75 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFV-----VSMFCSFETKRH   75 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCe-----eeeEEEEecCCE
Confidence            35899999999999999999999999999999987543    234567789999999998887     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC-
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH-  245 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~-  245 (264)
                      +|+||||+ +++|.+++....  .+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.... 
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~  153 (305)
T cd05609          76 LCMVMEYVEGGDCATLLKNIG--ALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM  153 (305)
T ss_pred             EEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence            99999999 899999998765  68999999999999999999999999999999999999999999999999886311 


Q ss_pred             --------------------CCcccceeeeeceeEee
Q 024661          246 --------------------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 --------------------~~~~~~~~y~ape~~~~  262 (264)
                                          ....++..|+|||.+.+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  190 (305)
T cd05609         154 SLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR  190 (305)
T ss_pred             CccccccccccccchhhccccCCccCccccCchhccC
Confidence                                11235667999998653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.96  E-value=3.1e-29  Score=204.60  Aligned_cols=164  Identities=22%  Similarity=0.278  Sum_probs=140.6

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      .+|++.+.||+|+||.||+|.+. ++..+++|++.+.......+.+|+++++.++|+++     +++++++...+..|+|
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~lv   77 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNL-----VQLYGVCTKQRPIFIV   77 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCE-----EEEEEEEcCCCceEEE
Confidence            35889999999999999999876 45679999987655555678889999999998887     9999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCCc--
Q 024661          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS--  248 (264)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~~--  248 (264)
                      |||+ +++|.+++.... ..+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||+++......  
T Consensus        78 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~  156 (256)
T cd05059          78 TEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT  156 (256)
T ss_pred             EecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceeccccccc
Confidence            9999 899999998654 368999999999999999999999999999999999999999999999999987543211  


Q ss_pred             -----ccceeeeeceeEee
Q 024661          249 -----FQTFLSMASRVYIC  262 (264)
Q Consensus       249 -----~~~~~y~ape~~~~  262 (264)
                           ..+..|++||.+.+
T Consensus       157 ~~~~~~~~~~y~~Pe~~~~  175 (256)
T cd05059         157 SSQGTKFPVKWAPPEVFDY  175 (256)
T ss_pred             ccCCCCCCccccCHHHhcc
Confidence                 12346999998653

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.96  E-value=1e-28  Score=204.55  Aligned_cols=163  Identities=30%  Similarity=0.445  Sum_probs=144.8

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      +|++.+.||.|++|.||+|.+..++..+++|++....   .....+.+|+.+++.+.|+++     +++++++.+....|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~~~   75 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYV-----VKLLDVFPHGSGFV   75 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCC-----cceeeEEecCCeeE
Confidence            5899999999999999999999999999999987432   335678899999999998888     99999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---
Q 024661          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---  246 (264)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---  246 (264)
                      +||||++++|.+++.... ..+++..++.++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.....   
T Consensus        76 ~v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~  154 (286)
T cd07832          76 LVMEYMPSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP  154 (286)
T ss_pred             EEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence            999999999999987654 4699999999999999999999999999999999999999999999999999876433   


Q ss_pred             ----CcccceeeeeceeEe
Q 024661          247 ----FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ----~~~~~~~y~ape~~~  261 (264)
                          ...++..|+|||.+.
T Consensus       155 ~~~~~~~~~~~y~aPE~~~  173 (286)
T cd07832         155 RLYSHQVATRWYRAPELLY  173 (286)
T ss_pred             CccccccCcccccCceeee
Confidence                234677899999874

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=7e-29  Score=204.09  Aligned_cols=168  Identities=27%  Similarity=0.416  Sum_probs=145.5

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeC---
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYR---  165 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~---  165 (264)
                      ..++|++.+.||.|++|.||+|.+..+++.+++|++.......+.+.+|+.+++++ .|+|+     +++++++...   
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i-----~~~~~~~~~~~~~   78 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNI-----ATFYGAFIKKNPP   78 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCCh-----heEEEEEEecCCC
Confidence            34789999999999999999999998999999999887666667889999999998 58877     9999998664   


Q ss_pred             ---CEEEEEEecC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          166 ---NHICIVFEKL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       166 ---~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                         ..+|+||||+ +++|.+++....  ...+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||
T Consensus        79 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~  158 (275)
T cd06608          79 GNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFG  158 (275)
T ss_pred             CcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCc
Confidence               4589999999 889999987532  3578999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCC------CcccceeeeeceeEee
Q 024661          240 VPSPRHA------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       240 ~a~~~~~------~~~~~~~y~ape~~~~  262 (264)
                      ++.....      ...++..|+|||++.+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  187 (275)
T cd06608         159 VSAQLDSTLGRRNTFIGTPYWMAPEVIAC  187 (275)
T ss_pred             cceecccchhhhcCccccccccCHhHhcc
Confidence            9865332      3346778999998754

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.96  E-value=1.5e-28  Score=205.86  Aligned_cols=169  Identities=24%  Similarity=0.311  Sum_probs=146.4

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech----hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeee
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~  163 (264)
                      .....+|.+.+.||+|+||.||+|.+..+++.|++|.+...    ....+.+.+|+++++.++|+|+     +++.+++.
T Consensus        11 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni-----v~~~~~~~   85 (307)
T cd06607          11 DDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNT-----IEYKGCYL   85 (307)
T ss_pred             CCcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCE-----EEEEEEEE
Confidence            34446799999999999999999999989999999988632    2334567889999999999887     99999999


Q ss_pred             eCCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          164 YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       164 ~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      +.+..|+||||+.++|.+++.... ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++..
T Consensus        86 ~~~~~~lv~e~~~g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~  164 (307)
T cd06607          86 REHTAWLVMEYCLGSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASL  164 (307)
T ss_pred             eCCeEEEEHHhhCCCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCccee
Confidence            999999999999888888887543 3689999999999999999999999999999999999999999999999999876


Q ss_pred             CCC--CcccceeeeeceeEee
Q 024661          244 RHA--FSFQTFLSMASRVYIC  262 (264)
Q Consensus       244 ~~~--~~~~~~~y~ape~~~~  262 (264)
                      ...  ...++..|+|||++.+
T Consensus       165 ~~~~~~~~~~~~y~aPE~~~~  185 (307)
T cd06607         165 VSPANSFVGTPYWMAPEVILA  185 (307)
T ss_pred             cCCCCCccCCccccCceeeec
Confidence            433  3347788999998753

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.96  E-value=9.8e-29  Score=204.49  Aligned_cols=162  Identities=28%  Similarity=0.458  Sum_probs=141.9

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      |++.+.||.|+||.||+|.+..++..+++|.+... ....+.+.+|+++++.+.|+|+     +.+++.+...+..|+||
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----i~~~~~~~~~~~~~~v~   81 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI-----VKLLDAFYYENNLWILI   81 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCe-----eeEEEEEeeCCEEEEEE
Confidence            78889999999999999999999999999988643 3445678889999999999888     99999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-----
Q 024661          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-----  246 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-----  246 (264)
                      ||+ +++|..++.... ..+++..+..++.|++.||.|||+.|++|+||||+|||++.++.++|+|||++.....     
T Consensus        82 e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~  160 (282)
T cd06643          82 EFCAGGAVDAVMLELE-RPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR  160 (282)
T ss_pred             EecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccccccc
Confidence            999 889988876533 3689999999999999999999999999999999999999999999999999865322     


Q ss_pred             -CcccceeeeeceeEe
Q 024661          247 -FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 -~~~~~~~y~ape~~~  261 (264)
                       ...++..||+||++.
T Consensus       161 ~~~~~~~~y~aPE~~~  176 (282)
T cd06643         161 DSFIGTPYWMAPEVVM  176 (282)
T ss_pred             ccccccccccCHhhcc
Confidence             234778899999874

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.96  E-value=7.9e-29  Score=206.69  Aligned_cols=166  Identities=26%  Similarity=0.339  Sum_probs=145.0

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ....+|++.+.||+|+||.||+|.+..+++.|++|.+.... ...+.+.+|+.+++.+.|+++     +.+++.+...+.
T Consensus        16 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~~~~   90 (297)
T cd06656          16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNI-----VNYLDSYLVGDE   90 (297)
T ss_pred             ChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCE-----eeEEEEEecCCE
Confidence            34478999999999999999999999999999999987432 334667889999999999887     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      .|+||||+ +++|.+++...   .+++..+..++.|++.||.|||+.|++|+||||+|||++.++.++|+|||++.....
T Consensus        91 ~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~  167 (297)
T cd06656          91 LWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP  167 (297)
T ss_pred             EEEeecccCCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccC
Confidence            99999999 99999998754   488999999999999999999999999999999999999999999999999875432


Q ss_pred             ------CcccceeeeeceeEee
Q 024661          247 ------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ------~~~~~~~y~ape~~~~  262 (264)
                            ...++..|++||.+.+
T Consensus       168 ~~~~~~~~~~~~~y~aPE~~~~  189 (297)
T cd06656         168 EQSKRSTMVGTPYWMAPEVVTR  189 (297)
T ss_pred             CccCcCcccCCccccCHHHHcC
Confidence                  2346778999997643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.96  E-value=6.6e-29  Score=205.01  Aligned_cols=168  Identities=17%  Similarity=0.277  Sum_probs=139.5

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCC-----CCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEcee
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNW  161 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~  161 (264)
                      ...++|++.+.||+|+||.||+|.+..     ++..+|+|.+....  .....+.+|+.+++.+.|+|+     ++++++
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----v~~~~~   77 (277)
T cd05062           3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV-----VRLLGV   77 (277)
T ss_pred             ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCe-----eeEEEE
Confidence            345789999999999999999998653     35679999886422  344567889999999988887     999999


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHHhcCC--------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCc
Q 024661          162 FDYRNHICIVFEKL-GPSLYDFLRKNSY--------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY  232 (264)
Q Consensus       162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~--------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~  232 (264)
                      +......++||||+ +++|.+++.+...        ..+++..+..++.|++.||.|||+.|++|+||||+||++++++.
T Consensus        78 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~  157 (277)
T cd05062          78 VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT  157 (277)
T ss_pred             EcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCC
Confidence            99999999999999 8999999975321        23577889999999999999999999999999999999999999


Q ss_pred             EEeccCCCCCcCCCC--------cccceeeeeceeEe
Q 024661          233 VKVPDYKVPSPRHAF--------SFQTFLSMASRVYI  261 (264)
Q Consensus       233 v~l~Dfg~a~~~~~~--------~~~~~~y~ape~~~  261 (264)
                      ++|+|||++......        ..++..|||||.+.
T Consensus       158 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  194 (277)
T cd05062         158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK  194 (277)
T ss_pred             EEECCCCCccccCCcceeecCCCCccCHhhcChhHhh
Confidence            999999998753221        12356799999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.96  E-value=2e-29  Score=206.18  Aligned_cols=164  Identities=24%  Similarity=0.333  Sum_probs=144.1

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh-hHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      ..+|++.++||.|+||.||+|.+.. +..+++|++..... ..+.+.+|+.+++.++|+++     +++++++.+....+
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~   78 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHL-----ISLFAVCSVGEPVY   78 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcch-----hheeeeEecCCCeE
Confidence            3569999999999999999999887 88899999875543 56778899999999998887     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCCc
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS  248 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~~  248 (264)
                      +||||+ +++|.+++.......+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus        79 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~  158 (261)
T cd05148          79 IITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV  158 (261)
T ss_pred             EEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCcc
Confidence            999999 8899999987655678999999999999999999999999999999999999999999999999987543221


Q ss_pred             ------ccceeeeeceeE
Q 024661          249 ------FQTFLSMASRVY  260 (264)
Q Consensus       249 ------~~~~~y~ape~~  260 (264)
                            .++..|++||.+
T Consensus       159 ~~~~~~~~~~~~~~PE~~  176 (261)
T cd05148         159 YLSSDKKIPYKWTAPEAA  176 (261)
T ss_pred             ccccCCCCceEecCHHHH
Confidence                  245679999975

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=7.3e-28  Score=201.32  Aligned_cols=157  Identities=39%  Similarity=0.671  Sum_probs=142.2

Q ss_pred             CCCCCCCceEEeeCCccC-CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccC---
Q 024661           74 RPDDKDGHYVFAIGENLT-PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD---  149 (264)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~-~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~---  149 (264)
                      ......+..++.+|+.+. +||.+.++||+|.|++||+|.|....+.||+|+++......+....||.+|+++....   
T Consensus        59 ~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~  138 (590)
T KOG1290|consen   59 EDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPND  138 (590)
T ss_pred             hhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCC
Confidence            344455678999999999 9999999999999999999999999999999999988888999999999999997644   


Q ss_pred             CCCcceEEEceeeee----CCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCCCCC
Q 024661          150 IGGTRCVQIRNWFDY----RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPEN  224 (264)
Q Consensus       150 ~~~~~~~~~~~~~~~----~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~dikp~N  224 (264)
                      .....+|++++.|..    ..++|+|+|++|.+|..+|.....+.++...++.|++||+.||.||| ++||||.||||+|
T Consensus       139 ~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPEN  218 (590)
T KOG1290|consen  139 PGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPEN  218 (590)
T ss_pred             CCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcce
Confidence            334678999999976    46899999999999999999988889999999999999999999999 5799999999999


Q ss_pred             EEeecC
Q 024661          225 ILLVSA  230 (264)
Q Consensus       225 ili~~~  230 (264)
                      ||+..+
T Consensus       219 vLl~~~  224 (590)
T KOG1290|consen  219 VLLCST  224 (590)
T ss_pred             eeeecc
Confidence            999765

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.96  E-value=1.5e-28  Score=200.41  Aligned_cols=165  Identities=24%  Similarity=0.352  Sum_probs=142.0

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee-CCEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-RNHI  168 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~-~~~~  168 (264)
                      .|++.+.||.|++|.||++.+..+++.+++|.+....   ...+.+.+|+++++.++|+++     +.+.+.+.. +..+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~   75 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNI-----VAYRESWEGEDGLL   75 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCe-----eeeeeeecCCCCEE
Confidence            4899999999999999999999999999999987432   344567889999999999887     888887764 5578


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-  246 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-  246 (264)
                      |++||++ +++|.+++.......+++..+..++.|++.||++||++|++|+||+|+||+++.++.++|+|||++..... 
T Consensus        76 ~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~  155 (257)
T cd08223          76 YIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ  155 (257)
T ss_pred             EEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence            9999999 89999999875545689999999999999999999999999999999999999999999999999865321 


Q ss_pred             -----CcccceeeeeceeEee
Q 024661          247 -----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 -----~~~~~~~y~ape~~~~  262 (264)
                           ...++..|+|||++.+
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~~  176 (257)
T cd08223         156 CDMASTLIGTPYYMSPELFSN  176 (257)
T ss_pred             CCccccccCCcCccChhHhcC
Confidence                 2346778999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.96  E-value=5.9e-29  Score=205.80  Aligned_cols=165  Identities=23%  Similarity=0.324  Sum_probs=140.4

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCC-----cEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKK-----ELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ++|++.+.||+|+||.||+|.+...+     ..+++|.++..  ......+.+|+.+++.+.|+++     +.+++++.+
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i-----~~~~~~~~~   79 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNI-----VCLLGVCTK   79 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCccc-----ceEEEEEcC
Confidence            46899999999999999999976554     67999988643  2345678899999999999888     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSY--------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS  229 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~--------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~  229 (264)
                      ....|++|||+ +++|.+++.....              ..+++..+..++.|++.||.|||++|++|+||||+||++++
T Consensus        80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~  159 (283)
T cd05048          80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE  159 (283)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcC
Confidence            99999999999 8999999976421              35788999999999999999999999999999999999999


Q ss_pred             CCcEEeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          230 AEYVKVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       230 ~~~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      ++.++|+|||++.....        ...++..|||||.+.
T Consensus       160 ~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  199 (283)
T cd05048         160 GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAIL  199 (283)
T ss_pred             CCcEEECCCcceeeccccccccccCCCcccccccCHHHhc
Confidence            99999999999875322        223466799999764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.96  E-value=8.8e-29  Score=204.87  Aligned_cols=165  Identities=22%  Similarity=0.323  Sum_probs=138.5

Q ss_pred             CCeEEEeecccCccEEEEEEEeC----CCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDN----EKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      +.|++.+.||+|+||.||+|...    .++..+++|.+....  .....+.+|+.+++.++|+|+     +++++++...
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~   79 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNI-----VCLLGVVTQE   79 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCe-----eeEEEEEecC
Confidence            46899999999999999999853    356789999886422  334577889999999999887     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcC---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNS---------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS  229 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~---------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~  229 (264)
                      ...|++|||+ +++|.+++....               ...+++..+..++.|++.||.|||++|++|+||||+|||++.
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~  159 (283)
T cd05090          80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGE  159 (283)
T ss_pred             CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcC
Confidence            9999999999 899999986321               124788889999999999999999999999999999999999


Q ss_pred             CCcEEeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          230 AEYVKVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       230 ~~~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      ++.++|+|||+++....        ...++..|+|||.+.
T Consensus       160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  199 (283)
T cd05090         160 QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIM  199 (283)
T ss_pred             CCcEEeccccccccccCCcceecccCCCccceecChHHhc
Confidence            99999999999975322        223456799999764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.96  E-value=7.9e-29  Score=211.53  Aligned_cols=165  Identities=23%  Similarity=0.329  Sum_probs=141.2

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .+.++|++.+.||+|+||.||+|.+..+++.+|+|.+.+.   ......+.+|+.+++.++|+|+     ++++++|...
T Consensus        13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~   87 (353)
T cd07850          13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNI-----IGLLNVFTPQ   87 (353)
T ss_pred             hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCC-----cceeeeeccC
Confidence            4568899999999999999999999999999999998642   2334567789999999999988     8888887543


Q ss_pred             ------CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          166 ------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       166 ------~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                            ...|+||||+.++|.+.+..    .+++..+..++.|++.||+|||++||+|+||||+||+++.++.++|+|||
T Consensus        88 ~~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg  163 (353)
T cd07850          88 KSLEEFQDVYLVMELMDANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG  163 (353)
T ss_pred             CCccccCcEEEEEeccCCCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCc
Confidence                  35799999998899988864    38899999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCCC-----cccceeeeeceeEee
Q 024661          240 VPSPRHAF-----SFQTFLSMASRVYIC  262 (264)
Q Consensus       240 ~a~~~~~~-----~~~~~~y~ape~~~~  262 (264)
                      ++......     ..++..|+|||.+.+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~  191 (353)
T cd07850         164 LARTAGTSFMMTPYVVTRYYRAPEVILG  191 (353)
T ss_pred             cceeCCCCCCCCCCcccccccCHHHHhC
Confidence            99764432     236778999997643

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=9.1e-29  Score=202.24  Aligned_cols=167  Identities=23%  Similarity=0.278  Sum_probs=144.9

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ...++|++.+.||+|+||.||+|.+. .+..+++|.+.........+.+|+.+++.+.|+++     +++++++......
T Consensus         3 ~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~   76 (261)
T cd05034           3 IPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKL-----VQLYAVCSEEEPI   76 (261)
T ss_pred             cchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCE-----eeeeeeeecCCce
Confidence            34578999999999999999999975 45779999988666666788999999999998887     9999999998999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF  247 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~  247 (264)
                      +++||++ +++|.+++.......+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus        77 ~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~  156 (261)
T cd05034          77 YIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDD  156 (261)
T ss_pred             EEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccch
Confidence            9999999 899999998765557899999999999999999999999999999999999999999999999998764421


Q ss_pred             -------cccceeeeeceeEe
Q 024661          248 -------SFQTFLSMASRVYI  261 (264)
Q Consensus       248 -------~~~~~~y~ape~~~  261 (264)
                             ...+..|++||.+.
T Consensus       157 ~~~~~~~~~~~~~y~~PE~~~  177 (261)
T cd05034         157 EYTAREGAKFPIKWTAPEAAN  177 (261)
T ss_pred             hhhhhhccCCCccccCHHHhc
Confidence                   12345699999764

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.96  E-value=9.9e-29  Score=204.40  Aligned_cols=167  Identities=24%  Similarity=0.363  Sum_probs=144.4

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeee----
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDY----  164 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~----  164 (264)
                      ..+.|++.+.||.|+||.||+|.+..+++.+++|++.........+..|+.+++.+ .|+|+     +++++++..    
T Consensus        14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i-----~~~~~~~~~~~~~   88 (282)
T cd06636          14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNI-----ATYYGAFIKKSPP   88 (282)
T ss_pred             hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcE-----EEEeeehhccccc
Confidence            34679999999999999999999999999999999876665666788899999998 46666     999988853    


Q ss_pred             --CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCC
Q 024661          165 --RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVP  241 (264)
Q Consensus       165 --~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a  241 (264)
                        ...+|++|||+ +++|.+++.......+++..++.++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++
T Consensus        89 ~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~  168 (282)
T cd06636          89 GHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVS  168 (282)
T ss_pred             CCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcch
Confidence              56899999999 889999998765556889999999999999999999999999999999999999999999999998


Q ss_pred             CcCC------CCcccceeeeeceeEe
Q 024661          242 SPRH------AFSFQTFLSMASRVYI  261 (264)
Q Consensus       242 ~~~~------~~~~~~~~y~ape~~~  261 (264)
                      ....      ....++..|+|||.+.
T Consensus       169 ~~~~~~~~~~~~~~~~~~y~aPE~l~  194 (282)
T cd06636         169 AQLDRTVGRRNTFIGTPYWMAPEVIA  194 (282)
T ss_pred             hhhhccccCCCcccccccccCHhhcC
Confidence            6532      2234778899999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.96  E-value=6.2e-29  Score=202.92  Aligned_cols=163  Identities=23%  Similarity=0.309  Sum_probs=140.1

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      ++|++.+.||+|+||.||+|.+.. +..+|+|.++......+.+.+|+.+++.+.|+++     +++++++.....+|++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~lv   77 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKL-----VQLYGVCTKQRPIYIV   77 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCe-----eeEEEEEccCCCcEEE
Confidence            469999999999999999998754 4459999887655555678899999999998887     9999999998999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC---
Q 024661          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF---  247 (264)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~---  247 (264)
                      |||+ +++|.+++.... ..+++..++.++.||+.||.|||+.|++|+||||+||+++.++.+||+|||.+......   
T Consensus        78 ~e~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~  156 (256)
T cd05113          78 TEYMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT  156 (256)
T ss_pred             EEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCcee
Confidence            9999 889999998654 26899999999999999999999999999999999999999999999999998753321   


Q ss_pred             ----cccceeeeeceeEe
Q 024661          248 ----SFQTFLSMASRVYI  261 (264)
Q Consensus       248 ----~~~~~~y~ape~~~  261 (264)
                          ..++..|++||.+.
T Consensus       157 ~~~~~~~~~~y~~pe~~~  174 (256)
T cd05113         157 SSVGSKFPVRWSPPEVLL  174 (256)
T ss_pred             ecCCCccChhhCCHHHHh
Confidence                12345699999764

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.96  E-value=1.7e-28  Score=204.60  Aligned_cols=162  Identities=27%  Similarity=0.374  Sum_probs=143.4

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      .+|++.+.||.|++|.||+|.+..+++.+++|.+.... ...+.+.+|+.+++.++|+|+     +.+++.+...+.+|+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~~~l   93 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNI-----VNFLDSFLVGDELFV   93 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCce-----eeeeeeEecCceEEE
Confidence            56999999999999999999999999999999886432 335677889999999999887     999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---  246 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---  246 (264)
                      ||||+ +++|.+++...   .+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.....   
T Consensus        94 v~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~  170 (296)
T cd06655          94 VMEYLAGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS  170 (296)
T ss_pred             EEEecCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence            99999 99999988754   589999999999999999999999999999999999999999999999999875432   


Q ss_pred             ---CcccceeeeeceeEe
Q 024661          247 ---FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~  261 (264)
                         ...++..|++||.+.
T Consensus       171 ~~~~~~~~~~y~aPE~~~  188 (296)
T cd06655         171 KRSTMVGTPYWMAPEVVT  188 (296)
T ss_pred             cCCCcCCCccccCcchhc
Confidence               224677899999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.96  E-value=1.6e-28  Score=204.38  Aligned_cols=165  Identities=25%  Similarity=0.416  Sum_probs=141.7

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ++|++.+.||.|++|.||+|.+..+++.+++|.+....   .....+.+|+++++.+.|+++     +++++++.+....
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~   76 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNI-----VRLQDVVHSEKRL   76 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCE-----eeEEEEEecCCeE
Confidence            46999999999999999999999999999999886432   234567889999999999887     9999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec-CCcEEeccCCCCCcCCC-
Q 024661          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS-AEYVKVPDYKVPSPRHA-  246 (264)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~-~~~v~l~Dfg~a~~~~~-  246 (264)
                      |+||||++++|.+++.......+++..++.++.||+.||+|||++|++|+||+|+||+++. ++.+||+|||++..... 
T Consensus        77 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~  156 (294)
T PLN00009         77 YLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP  156 (294)
T ss_pred             EEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence            9999999889999887655445788999999999999999999999999999999999995 56799999999865321 


Q ss_pred             -----CcccceeeeeceeEe
Q 024661          247 -----FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 -----~~~~~~~y~ape~~~  261 (264)
                           ...++..|++||.+.
T Consensus       157 ~~~~~~~~~~~~y~~PE~~~  176 (294)
T PLN00009        157 VRTFTHEVVTLWYRAPEILL  176 (294)
T ss_pred             ccccccCceeecccCHHHHh
Confidence                 223567899999764

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.96  E-value=1.7e-28  Score=203.13  Aligned_cols=164  Identities=23%  Similarity=0.344  Sum_probs=137.5

Q ss_pred             CCeEEEeecccCccEEEEEEEe----CCCCcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee--
Q 024661           92 PRYRILSKMGEGTFGQVVECFD----NEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--  164 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~----~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~--  164 (264)
                      .+|++.+.||+|+||.||+|..    ..+++.|++|.+.... ...+.+.+|+++++.++|+|+     +++.+++..  
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~   78 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNI-----VKYKGVCYSAG   78 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCe-----eEEEEEEccCC
Confidence            4699999999999999999974    4568899999987433 345678899999999999888     888887643  


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      ...+++||||+ +++|.+++.... ..+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++..
T Consensus        79 ~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~  157 (284)
T cd05081          79 RRNLRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKV  157 (284)
T ss_pred             CCceEEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCccccc
Confidence            45789999999 899999997643 3589999999999999999999999999999999999999999999999999986


Q ss_pred             CCCC---------cccceeeeeceeEe
Q 024661          244 RHAF---------SFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~~---------~~~~~~y~ape~~~  261 (264)
                      ....         ...+..|++||.+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~  184 (284)
T cd05081         158 LPQDKEYYKVREPGESPIFWYAPESLT  184 (284)
T ss_pred             ccCCCcceeecCCCCCceEeeCHHHhc
Confidence            4321         12334699999764

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.96  E-value=4.6e-30  Score=218.16  Aligned_cols=151  Identities=25%  Similarity=0.357  Sum_probs=135.9

Q ss_pred             EeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC-
Q 024661           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-  175 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-  175 (264)
                      ++.||+|+.|.||+|+..  ++.||||.++.      .-..+|.-|++|+|+||     +.|.++|.....+||||||| 
T Consensus       129 LeWlGSGaQGAVF~Grl~--netVAVKKV~e------lkETdIKHLRkLkH~NI-----I~FkGVCtqsPcyCIiMEfCa  195 (904)
T KOG4721|consen  129 LEWLGSGAQGAVFLGRLH--NETVAVKKVRE------LKETDIKHLRKLKHPNI-----ITFKGVCTQSPCYCIIMEFCA  195 (904)
T ss_pred             hhhhccCcccceeeeecc--CceehhHHHhh------hhhhhHHHHHhccCcce-----eeEeeeecCCceeEEeeeccc
Confidence            678999999999999876  77899997652      22347889999999998     99999999999999999999 


Q ss_pred             CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-----Cccc
Q 024661          176 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-----FSFQ  250 (264)
Q Consensus       176 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-----~~~~  250 (264)
                      .|.|...|+...  .++......|..+|+.|+.|||.+.|||||||.-||||..+..|||+|||.+.....     ..+|
T Consensus       196 ~GqL~~VLka~~--~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaG  273 (904)
T KOG4721|consen  196 QGQLYEVLKAGR--PITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAG  273 (904)
T ss_pred             cccHHHHHhccC--ccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhh
Confidence            999999999876  899999999999999999999999999999999999999999999999999876443     5579


Q ss_pred             ceeeeeceeEee
Q 024661          251 TFLSMASRVYIC  262 (264)
Q Consensus       251 ~~~y~ape~~~~  262 (264)
                      |..|||||+++.
T Consensus       274 TVaWMAPEvIrn  285 (904)
T KOG4721|consen  274 TVAWMAPEVIRN  285 (904)
T ss_pred             hHhhhCHHHhhc
Confidence            999999999863

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.96  E-value=4.9e-29  Score=203.55  Aligned_cols=162  Identities=23%  Similarity=0.365  Sum_probs=144.8

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      +|++.+.||.|+||.||+|.+..+++.+++|++.+..    ...+.+.+|++++++++|+|+     +.+++.+......
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~   75 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFL-----VNLWYSFQDEENM   75 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCCh-----HHHHHhhcCCCeE
Confidence            4899999999999999999999999999999997532    345678899999999999988     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF  247 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~  247 (264)
                      |+||||+ +++|.+++....  .+++..+..++.|++.||.|||++|++|+||+|+||++++++.++|+|||++......
T Consensus        76 ~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~  153 (258)
T cd05578          76 YLVVDLLLGGDLRYHLSQKV--KFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD  153 (258)
T ss_pred             EEEEeCCCCCCHHHHHHhcC--CcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence            9999999 999999998763  6899999999999999999999999999999999999999999999999998764432


Q ss_pred             -----cccceeeeeceeEe
Q 024661          248 -----SFQTFLSMASRVYI  261 (264)
Q Consensus       248 -----~~~~~~y~ape~~~  261 (264)
                           ..++..|++||.+.
T Consensus       154 ~~~~~~~~~~~y~~PE~~~  172 (258)
T cd05578         154 TLTTSTSGTPGYMAPEVLC  172 (258)
T ss_pred             ccccccCCChhhcCHHHHc
Confidence                 34677899999764

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.96  E-value=4.8e-29  Score=211.47  Aligned_cols=166  Identities=20%  Similarity=0.283  Sum_probs=136.2

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCC-----CCcEEEEEEEech--hhhHHHHHHHHHHHHHH-hccCCCCcceEEEceee
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWF  162 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~  162 (264)
                      .++|++.+.||.|+||.||+|.+..     +++.||+|+++..  ....+.+..|+.+++++ .|+|+     +.+++++
T Consensus         6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~ni-----v~~~~~~   80 (337)
T cd05054           6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNV-----VNLLGAC   80 (337)
T ss_pred             HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcch-----hheeeeE
Confidence            3579999999999999999997543     4578999988742  23345677899999999 67777     9999877


Q ss_pred             ee-CCEEEEEEecC-CCCHHHHHHhcCC----------------------------------------------------
Q 024661          163 DY-RNHICIVFEKL-GPSLYDFLRKNSY----------------------------------------------------  188 (264)
Q Consensus       163 ~~-~~~~~lv~e~~-~~~L~~~l~~~~~----------------------------------------------------  188 (264)
                      .. +..++++|||+ +++|.+++.....                                                    
T Consensus        81 ~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (337)
T cd05054          81 TKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDE  160 (337)
T ss_pred             ecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccch
Confidence            54 56789999999 9999999864321                                                    


Q ss_pred             -------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC--------Cccccee
Q 024661          189 -------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA--------FSFQTFL  253 (264)
Q Consensus       189 -------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~--------~~~~~~~  253 (264)
                             ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++.....        ...++..
T Consensus       161 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~  240 (337)
T cd05054         161 EGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK  240 (337)
T ss_pred             hhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcc
Confidence                   2578899999999999999999999999999999999999999999999999976421        1223567


Q ss_pred             eeeceeEe
Q 024661          254 SMASRVYI  261 (264)
Q Consensus       254 y~ape~~~  261 (264)
                      |||||++.
T Consensus       241 y~aPE~~~  248 (337)
T cd05054         241 WMAPESIF  248 (337)
T ss_pred             ccCcHHhc
Confidence            99999764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.96  E-value=3.3e-29  Score=188.60  Aligned_cols=165  Identities=21%  Similarity=0.322  Sum_probs=138.5

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEec--hhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      +...-+..||+|++|.|=+.++..+|..+|+|.+..  ..+...+..+|+++..+....    ++.|.|++.+..+..+|
T Consensus        46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~C----Pf~V~FyGa~~regdvw  121 (282)
T KOG0984|consen   46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDC----PFTVHFYGALFREGDVW  121 (282)
T ss_pred             hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCC----CeEEEeehhhhccccEE
Confidence            445567889999999999999999999999999873  345556777788776654432    67799999999999999


Q ss_pred             EEEecCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          170 IVFEKLGPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       170 lv~e~~~~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      +.||.|..+|..+-..  ..+..++|..+-+|+..++.||.|||++ .++|||+||+||||+.+|+||+||||++-....
T Consensus       122 IcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~d  201 (282)
T KOG0984|consen  122 ICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVD  201 (282)
T ss_pred             EeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehh
Confidence            9999999999877653  2345799999999999999999999976 899999999999999999999999999976544


Q ss_pred             C-----cccceeeeeceeE
Q 024661          247 F-----SFQTFLSMASRVY  260 (264)
Q Consensus       247 ~-----~~~~~~y~ape~~  260 (264)
                      +     ..|-..|||||.+
T Consensus       202 SiAkt~daGCkpYmaPEri  220 (282)
T KOG0984|consen  202 SIAKTMDAGCKPYMAPERI  220 (282)
T ss_pred             hhHHHHhcCCCccCChhhc
Confidence            3     4566789999975

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.96  E-value=3.3e-30  Score=204.82  Aligned_cols=166  Identities=22%  Similarity=0.384  Sum_probs=140.8

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCC----cEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKK----ELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~----~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ..|++..+||+|.||.||+|..+.++    +.+|||.++.+   ........+|+.+++.++|+|+     +.+..+|-.
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nv-----i~Lv~Vfl~   98 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNV-----ISLVKVFLS   98 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcc-----hhHHHHHhc
Confidence            45999999999999999999665543    26899988743   2456778899999999999998     777777766


Q ss_pred             -CCEEEEEEecCCCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC----CcEEec
Q 024661          165 -RNHICIVFEKLGPSLYDFLRKN---SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA----EYVKVP  236 (264)
Q Consensus       165 -~~~~~lv~e~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~----~~v~l~  236 (264)
                       +..+++++||...+|+++++-+   ....++...+..|+.||+.|+.|||++.|+||||||.|||+..+    |.|||+
T Consensus        99 ~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIa  178 (438)
T KOG0666|consen   99 HDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIA  178 (438)
T ss_pred             cCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEee
Confidence             8899999999999999999733   22458889999999999999999999999999999999999987    899999


Q ss_pred             cCCCCCcCCC---------CcccceeeeeceeEee
Q 024661          237 DYKVPSPRHA---------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       237 Dfg~a~~~~~---------~~~~~~~y~ape~~~~  262 (264)
                      |||+++..+.         ...-|.+|.|||++++
T Consensus       179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLG  213 (438)
T KOG0666|consen  179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLG  213 (438)
T ss_pred             cccHHHHhhccccccccCCceEEEEEecChHHhcc
Confidence            9999987432         2246889999999876

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.96  E-value=5.3e-29  Score=211.24  Aligned_cols=164  Identities=26%  Similarity=0.436  Sum_probs=140.1

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC--
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR--  165 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~--  165 (264)
                      +.++|++.+.||+|+||.||+|.+..+|+.||+|.+...  ......+.+|+.+++.++|+|+     +++++++...  
T Consensus         3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~   77 (336)
T cd07849           3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENI-----IGILDIIRPPSF   77 (336)
T ss_pred             cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCc-----Cchhheeecccc
Confidence            457899999999999999999999999999999998632  2345667889999999999888     7777765543  


Q ss_pred             ---CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          166 ---NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       166 ---~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                         ...|+++|+++++|.+++...   .+++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||++.
T Consensus        78 ~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~  154 (336)
T cd07849          78 ESFNDVYIVQELMETDLYKLIKTQ---HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLAR  154 (336)
T ss_pred             cccceEEEEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECccccee
Confidence               468999999988999888653   59999999999999999999999999999999999999999999999999986


Q ss_pred             cCCC---------CcccceeeeeceeEe
Q 024661          243 PRHA---------FSFQTFLSMASRVYI  261 (264)
Q Consensus       243 ~~~~---------~~~~~~~y~ape~~~  261 (264)
                      ....         ...++..|||||.+.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~  182 (336)
T cd07849         155 IADPEHDHTGFLTEYVATRWYRAPEIML  182 (336)
T ss_pred             eccccccccCCcCCcCcCCCccChHHhh
Confidence            5322         124677899999764

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.96  E-value=2.2e-28  Score=200.52  Aligned_cols=165  Identities=24%  Similarity=0.328  Sum_probs=143.6

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech----hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++.+.||.|+||.||+|.+..+++.+++|.++..    ....+.+.+|+++++.+.|+++     +.+++.+...+.
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i-----~~~~~~~~~~~~   76 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNV-----IKYLASFIENNE   76 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCe-----eeeeeeeecCCe
Confidence            5799999999999999999999999999999988632    2345678899999999999887     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          168 ICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      .+++|||+ +++|.+++...  ....+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++...
T Consensus        77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~  156 (267)
T cd08224          77 LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFF  156 (267)
T ss_pred             EEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeec
Confidence            99999999 89999998753  2245899999999999999999999999999999999999999999999999998653


Q ss_pred             CC------CcccceeeeeceeEe
Q 024661          245 HA------FSFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~~------~~~~~~~y~ape~~~  261 (264)
                      ..      ...++..|+|||.+.
T Consensus       157 ~~~~~~~~~~~~~~~y~apE~~~  179 (267)
T cd08224         157 SSKTTAAHSLVGTPYYMSPERIH  179 (267)
T ss_pred             cCCCcccceecCCccccCHHHhc
Confidence            32      224677899999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.96  E-value=1.3e-28  Score=206.20  Aligned_cols=166  Identities=19%  Similarity=0.307  Sum_probs=138.4

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCC-------CCcEEEEEEEech--hhhHHHHHHHHHHHHHH-hccCCCCcceEEEce
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNE-------KKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRN  160 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~  160 (264)
                      .++|.+.+.||+|+||.||+|.+..       ....+|+|.++..  ......+.+|+.+++.+ .|+++     +++++
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i-----~~~~~   91 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNI-----INLLG   91 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCE-----eeEEE
Confidence            4679999999999999999998643       2346999988743  23345678899999998 67777     99999


Q ss_pred             eeeeCCEEEEEEecC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 024661          161 WFDYRNHICIVFEKL-GPSLYDFLRKNSY--------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENI  225 (264)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~--------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Ni  225 (264)
                      ++...+..|+||||+ +++|.+++.....              ..+++..++.++.|++.||+|||++|++|+||||+||
T Consensus        92 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni  171 (307)
T cd05098          92 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNV  171 (307)
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHhe
Confidence            999999999999999 8999999986421              2478889999999999999999999999999999999


Q ss_pred             EeecCCcEEeccCCCCCcCCCC--------cccceeeeeceeEe
Q 024661          226 LLVSAEYVKVPDYKVPSPRHAF--------SFQTFLSMASRVYI  261 (264)
Q Consensus       226 li~~~~~v~l~Dfg~a~~~~~~--------~~~~~~y~ape~~~  261 (264)
                      +++.++.++|+|||++......        ...+..|||||.+.
T Consensus       172 ll~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~  215 (307)
T cd05098         172 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF  215 (307)
T ss_pred             EEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhc
Confidence            9999999999999998754321        12335799999764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.96  E-value=9.4e-29  Score=202.19  Aligned_cols=166  Identities=23%  Similarity=0.331  Sum_probs=141.7

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ...++|++.++||+|+||.||+|... +++.+++|.+.........+.+|+.+++.++|+++     +.+++++. .+..
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~-~~~~   75 (260)
T cd05067           3 VPRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRL-----VRLYAVVT-QEPI   75 (260)
T ss_pred             cchHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCe-----eeEEEEEc-cCCc
Confidence            34577999999999999999999864 56789999988666556788899999999999887     88888764 4678


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF  247 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~  247 (264)
                      +++||++ +++|.+++.......+++..+..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||++......
T Consensus        76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~  155 (260)
T cd05067          76 YIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDN  155 (260)
T ss_pred             EEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence            9999999 899999998765557899999999999999999999999999999999999999999999999998754421


Q ss_pred             -------cccceeeeeceeEe
Q 024661          248 -------SFQTFLSMASRVYI  261 (264)
Q Consensus       248 -------~~~~~~y~ape~~~  261 (264)
                             ..++..|++||++.
T Consensus       156 ~~~~~~~~~~~~~y~~pe~~~  176 (260)
T cd05067         156 EYTAREGAKFPIKWTAPEAIN  176 (260)
T ss_pred             CcccccCCcccccccCHHHhc
Confidence                   12345799999763

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.96  E-value=2e-30  Score=237.20  Aligned_cols=167  Identities=28%  Similarity=0.348  Sum_probs=148.7

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEec---hhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      +.-+|....+||.|.||.||.|....+|+..|+|-++-   .......+.+|+.++..+.|+|+     |+++++-.+.+
T Consensus      1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNl-----V~YyGVEvHRe 1307 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNL-----VRYYGVEVHRE 1307 (1509)
T ss_pred             ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccc-----cccCceeecHH
Confidence            33468888999999999999999999999999997763   23455678899999999999999     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      .++|.|||| +|+|.+++....  ..++.....+..|++.|+.|||++|||||||||.||+++.+|.+|++|||.|....
T Consensus      1308 kv~IFMEyC~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~ 1385 (1509)
T KOG4645|consen 1308 KVYIFMEYCEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIK 1385 (1509)
T ss_pred             HHHHHHHHhccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEec
Confidence            999999999 999999998764  67888889999999999999999999999999999999999999999999998754


Q ss_pred             CCc----------ccceeeeeceeEeec
Q 024661          246 AFS----------FQTFLSMASRVYICI  263 (264)
Q Consensus       246 ~~~----------~~~~~y~ape~~~~~  263 (264)
                      ...          .||+.|||||++.+.
T Consensus      1386 ~~~~~~~~el~~~~GT~~YMAPEvit~t 1413 (1509)
T KOG4645|consen 1386 NNAQTMPGELQSMMGTPMYMAPEVITGT 1413 (1509)
T ss_pred             CchhcCCHHHHhhcCCchhcCchhhccc
Confidence            422          589999999998764

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.96  E-value=3.2e-29  Score=196.06  Aligned_cols=163  Identities=21%  Similarity=0.336  Sum_probs=138.5

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      ..+.+..||+|+-|.||+++.+.+|..+|||...+.  +.+.+++.+.++++......    ++||+.+++|..+..+++
T Consensus        93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dc----pyIV~c~GyFi~n~dV~I  168 (391)
T KOG0983|consen   93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDC----PYIVQCFGYFITNTDVFI  168 (391)
T ss_pred             HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCC----CeeeeeeeEEeeCchHHH
Confidence            355677899999999999999999999999998753  34556777777776654322    667999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEeecCCcEEeccCCCCCc-----C
Q 024661          171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKVPSP-----R  244 (264)
Q Consensus       171 v~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~-----~  244 (264)
                      .||.|..-+..+++..+ .+++|..+-.+...++.||.||.+ +||+|||+||+|||+|+.|++||||||++-.     .
T Consensus       169 cMelMs~C~ekLlkrik-~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA  247 (391)
T KOG0983|consen  169 CMELMSTCAEKLLKRIK-GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA  247 (391)
T ss_pred             HHHHHHHHHHHHHHHhc-CCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccc
Confidence            99999777777777655 479999999999999999999985 5899999999999999999999999999854     4


Q ss_pred             CCCcccceeeeeceeE
Q 024661          245 HAFSFQTFLSMASRVY  260 (264)
Q Consensus       245 ~~~~~~~~~y~ape~~  260 (264)
                      +..+.|-..|||||-+
T Consensus       248 htrsAGC~~YMaPERi  263 (391)
T KOG0983|consen  248 HTRSAGCAAYMAPERI  263 (391)
T ss_pred             cccccCCccccCcccc
Confidence            5566788899999965

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.96  E-value=1.2e-28  Score=201.52  Aligned_cols=164  Identities=23%  Similarity=0.329  Sum_probs=138.7

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      .++|.+.++||+|++|.||+|.+..++ .+++|.+.......+.+.+|+.+++.+.|+++     +.+++++. .+..|+
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~-~~~~~~   77 (260)
T cd05069           5 RESLRLDVKLGQGCFGEVWMGTWNGTT-KVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKL-----VPLYAVVS-EEPIYI   77 (260)
T ss_pred             hHHeeeeeeecCcCCCeEEEEEEcCCc-eEEEEEcccCCccHHHHHHHHHHHHhCCCCCe-----eeEEEEEc-CCCcEE
Confidence            467999999999999999999876654 58999887655556778899999999999887     88888775 456899


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC--
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF--  247 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~--  247 (264)
                      +|||+ +++|.+++.......+++..+..++.|++.||.|||+.|++|+||+|+||++++++.++|+|||++......  
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~  157 (260)
T cd05069          78 VTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY  157 (260)
T ss_pred             EEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcc
Confidence            99999 789999998765456899999999999999999999999999999999999999999999999999754321  


Q ss_pred             -----cccceeeeeceeEe
Q 024661          248 -----SFQTFLSMASRVYI  261 (264)
Q Consensus       248 -----~~~~~~y~ape~~~  261 (264)
                           ..++..|++||...
T Consensus       158 ~~~~~~~~~~~y~~Pe~~~  176 (260)
T cd05069         158 TARQGAKFPIKWTAPEAAL  176 (260)
T ss_pred             cccCCCccchhhCCHHHhc
Confidence                 12345699999653

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.96  E-value=2e-28  Score=200.88  Aligned_cols=164  Identities=22%  Similarity=0.292  Sum_probs=140.7

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCC---CcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      ++|++.+.||+|+||.||+|.+..+   ...+++|.++..  ......+.+|+.+++.++|+++     +++++.+...+
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~   78 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNI-----IRLEGVVTKSR   78 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCc-----ceEeEEEecCC
Confidence            5699999999999999999998644   457999988643  3345678889999999999888     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      ..+++|||+ +++|.+++.... ..+++..++.++.|++.||.|||+++|+|+||||+||+++.++.++|+|||++....
T Consensus        79 ~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~  157 (266)
T cd05033          79 PVMIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLE  157 (266)
T ss_pred             ceEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccc
Confidence            999999999 889999998654 368999999999999999999999999999999999999999999999999998653


Q ss_pred             C--------CcccceeeeeceeEe
Q 024661          246 A--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ~--------~~~~~~~y~ape~~~  261 (264)
                      .        ....+..|++||.+.
T Consensus       158 ~~~~~~~~~~~~~~~~y~~Pe~~~  181 (266)
T cd05033         158 DSEATYTTKGGKIPIRWTAPEAIA  181 (266)
T ss_pred             ccccceeccCCCCCccccChhhhc
Confidence            1        112345699999764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.96  E-value=7.4e-29  Score=206.31  Aligned_cols=164  Identities=26%  Similarity=0.388  Sum_probs=142.1

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC--C
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR--N  166 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~--~  166 (264)
                      +.|++.+.||.|+||.||+|.+..+++.+++|.++...   .....+.+|+.+++.+.|+|+     +.+++++...  +
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-----~~~~~~~~~~~~~   79 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNI-----VTVKEVVVGSNLD   79 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCE-----EEEEEEEEecCCC
Confidence            46999999999999999999999999999999987432   223356789999999998887     9999988877  8


Q ss_pred             EEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          167 HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       167 ~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      ..|+||||++++|.+++.... ..+++..++.++.||+.||+|||++|++|+||+|+||+++.++.++|+|||++.....
T Consensus        80 ~~~lv~e~~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  158 (293)
T cd07843          80 KIYMVMEYVEHDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGS  158 (293)
T ss_pred             cEEEEehhcCcCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence            999999999879999988654 3689999999999999999999999999999999999999999999999999875433


Q ss_pred             ------CcccceeeeeceeEe
Q 024661          247 ------FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ------~~~~~~~y~ape~~~  261 (264)
                            ...++..|+|||.+.
T Consensus       159 ~~~~~~~~~~~~~~~aPE~~~  179 (293)
T cd07843         159 PLKPYTQLVVTLWYRAPELLL  179 (293)
T ss_pred             CccccccccccccccCchhhc
Confidence                  234677899999864

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.96  E-value=1.3e-28  Score=203.78  Aligned_cols=165  Identities=28%  Similarity=0.472  Sum_probs=143.9

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      .|++.+.||.|++|.||+|++..+++.+++|.+....   .....+.+|+++++.++|+|+     +++++++.+.+..+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~~~   75 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----VKLLDVIHTENKLY   75 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCC-----cchhhhcccCCcEE
Confidence            3889999999999999999999999999999886432   233567889999999999988     99999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---
Q 024661          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---  246 (264)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---  246 (264)
                      +||||+.++|.+++.......+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||++.....   
T Consensus        76 ~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~  155 (284)
T cd07860          76 LVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR  155 (284)
T ss_pred             EEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc
Confidence            99999977999998876556789999999999999999999999999999999999999999999999999865322   


Q ss_pred             ---CcccceeeeeceeEee
Q 024661          247 ---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~~  262 (264)
                         ...++..|+|||.+.+
T Consensus       156 ~~~~~~~~~~y~aPE~~~~  174 (284)
T cd07860         156 TYTHEVVTLWYRAPEILLG  174 (284)
T ss_pred             ccccccccccccCCeEEec
Confidence               1235678999998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.96  E-value=1.8e-28  Score=203.63  Aligned_cols=168  Identities=18%  Similarity=0.281  Sum_probs=138.4

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCC-----CCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceee
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~  162 (264)
                      ..++|++.+.||+|+||.||+|..+.     .+..+|+|.+....  .....+.+|+.+++.+.|+++     +++++.+
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~   78 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV-----VRLLGVV   78 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCe-----eeEEEEE
Confidence            45789999999999999999997642     24579999876432  234467789999999998887     9999999


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcE
Q 024661          163 DYRNHICIVFEKL-GPSLYDFLRKNS--------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV  233 (264)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~--------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v  233 (264)
                      .+.+..|+||||+ +++|.+++....        ...++...+..++.|++.||.|||+++|+||||||+||+++.++.+
T Consensus        79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~  158 (288)
T cd05061          79 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTV  158 (288)
T ss_pred             cCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcE
Confidence            9999999999999 999999997532        1234677889999999999999999999999999999999999999


Q ss_pred             EeccCCCCCcCCC--------CcccceeeeeceeEee
Q 024661          234 KVPDYKVPSPRHA--------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       234 ~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~~  262 (264)
                      +|+|||+++....        ...++..|++||.+.+
T Consensus       159 ~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~  195 (288)
T cd05061         159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD  195 (288)
T ss_pred             EECcCCccccccccccccccCCCcccccccCHHHhcc
Confidence            9999999875322        1123567999998653

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.96  E-value=8.8e-29  Score=202.99  Aligned_cols=165  Identities=25%  Similarity=0.315  Sum_probs=143.1

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech----hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++.+.||+|++|.||+|.+..+++.+++|.+...    ......+.+|+.+++.+.|+|+     +++++++..++.
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~~~~   76 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNV-----IKYYASFIEDNE   76 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCch-----hhhhheeEeCCe
Confidence            4688999999999999999999999999999987642    2344677889999999999888     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          168 ICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      .+++||++ +++|.+++...  ....+++..++.++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++...
T Consensus        77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~  156 (267)
T cd08229          77 LNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF  156 (267)
T ss_pred             EEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhcc
Confidence            99999999 88999998742  2246899999999999999999999999999999999999999999999999988654


Q ss_pred             CC------CcccceeeeeceeEe
Q 024661          245 HA------FSFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~~------~~~~~~~y~ape~~~  261 (264)
                      ..      ...++..|+|||.+.
T Consensus       157 ~~~~~~~~~~~~~~~~~ape~~~  179 (267)
T cd08229         157 SSKTTAAHSLVGTPYYMSPERIH  179 (267)
T ss_pred             ccCCcccccccCCcCccCHHHhc
Confidence            32      235777899999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.96  E-value=1.2e-28  Score=202.18  Aligned_cols=162  Identities=25%  Similarity=0.357  Sum_probs=141.7

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-------hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      +|+..+.||+|++|.||++.+..+++.+++|++....       ...+.+.+|+.+++.++|+++     +++++.+.+.
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~   75 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHI-----IRMLGATCED   75 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCce-----ehhhceeccC
Confidence            4788899999999999999999999999999986422       235678899999999999888     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC-cEEeccCCCCCc
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE-YVKVPDYKVPSP  243 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~-~v~l~Dfg~a~~  243 (264)
                      +..++||||+ +++|.+++....  .+++..+..++.|++.||.|||++|++|+||+|+||+++.++ .++|+|||++..
T Consensus        76 ~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~  153 (268)
T cd06630          76 SHFNLFVEWMAGGSVSHLLSKYG--AFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAAR  153 (268)
T ss_pred             CeEEEEEeccCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence            9999999999 899999998755  789999999999999999999999999999999999998776 699999999865


Q ss_pred             CCC----------CcccceeeeeceeEe
Q 024661          244 RHA----------FSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~----------~~~~~~~y~ape~~~  261 (264)
                      ...          ...++..|++||.+.
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~  181 (268)
T cd06630         154 LAAKGTGAGEFQGQLLGTIAFMAPEVLR  181 (268)
T ss_pred             cccccccCCccccccccccceeCHhHhc
Confidence            432          224677899999764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.96  E-value=1.6e-28  Score=203.49  Aligned_cols=163  Identities=23%  Similarity=0.341  Sum_probs=138.1

Q ss_pred             CeEEEeecccCccEEEEEEEe----CCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC-
Q 024661           93 RYRILSKMGEGTFGQVVECFD----NEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR-  165 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~----~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~-  165 (264)
                      -|++.+.||+|+||.||+|..    ..++..+++|.++..  ......+.+|+.+++.+.|+|+     +++.+++... 
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~   79 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI-----VKYKGICTEDG   79 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCe-----eeeeeEEecCC
Confidence            378999999999999999984    456788999998633  3345678899999999999887     8898888774 


Q ss_pred             -CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          166 -NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       166 -~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                       ...++||||+ +++|.+++.... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++.
T Consensus        80 ~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~  158 (284)
T cd05079          80 GNGIKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKA  158 (284)
T ss_pred             CCceEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccc
Confidence             6789999999 999999997653 3589999999999999999999999999999999999999999999999999875


Q ss_pred             CCC---------CcccceeeeeceeEe
Q 024661          244 RHA---------FSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~---------~~~~~~~y~ape~~~  261 (264)
                      ...         ...++..|+|||++.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~y~apE~~~  185 (284)
T cd05079         159 IETDKEYYTVKDDLDSPVFWYAPECLI  185 (284)
T ss_pred             cccCccceeecCCCCCCccccCHHHhc
Confidence            432         223455799999764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.96  E-value=1.5e-28  Score=205.60  Aligned_cols=165  Identities=21%  Similarity=0.308  Sum_probs=137.4

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcE--EEEEEEech--hhhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeCC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKEL--VAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~--vaiK~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      ++|++.+.||+|+||.||+|.+..++..  +++|.++..  ......+.+|++++.++ .|+++     +++++++..++
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~i-----v~~~~~~~~~~   81 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI-----INLLGACEHRG   81 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCc-----ceEEEEECCCC
Confidence            4699999999999999999998877754  566665532  33456778899999999 78877     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~  231 (264)
                      .+|+||||+ +++|.+++....              ...+++..++.++.||+.||+|||++|++||||||+|||++.++
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~  161 (303)
T cd05088          82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY  161 (303)
T ss_pred             CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCC
Confidence            999999999 899999997542              12578999999999999999999999999999999999999999


Q ss_pred             cEEeccCCCCCcCCCC-----cccceeeeeceeEe
Q 024661          232 YVKVPDYKVPSPRHAF-----SFQTFLSMASRVYI  261 (264)
Q Consensus       232 ~v~l~Dfg~a~~~~~~-----~~~~~~y~ape~~~  261 (264)
                      .++|+|||++......     ...+..|+|||.+.
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~  196 (303)
T cd05088         162 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLN  196 (303)
T ss_pred             cEEeCccccCcccchhhhcccCCCcccccCHHHHh
Confidence            9999999998643211     12345699999753

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.96  E-value=1.2e-28  Score=206.91  Aligned_cols=165  Identities=25%  Similarity=0.386  Sum_probs=141.2

Q ss_pred             CeEEEeecccCccEEEEEEEeCC--CCcEEEEEEEech----hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC-
Q 024661           93 RYRILSKMGEGTFGQVVECFDNE--KKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR-  165 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~-  165 (264)
                      +|++.++||+|+||.||+|.+..  +++.+|+|.+...    ....+...+|+.+++.++|+++     +++++++.+. 
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~   75 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENV-----VSLVEVFLEHA   75 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCc-----cceEEEEeCCC
Confidence            58999999999999999999988  7899999998752    2334667889999999999988     9999999888 


Q ss_pred             -CEEEEEEecCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec----CCcEEecc
Q 024661          166 -NHICIVFEKLGPSLYDFLRKNS---YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS----AEYVKVPD  237 (264)
Q Consensus       166 -~~~~lv~e~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~----~~~v~l~D  237 (264)
                       ..+|+|||+++++|.+++....   ...+++..++.++.||+.||.|||+.+|+|+||||+||+++.    ++.+||+|
T Consensus        76 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~D  155 (316)
T cd07842          76 DKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGD  155 (316)
T ss_pred             CceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECC
Confidence             8899999999888888876432   236899999999999999999999999999999999999999    89999999


Q ss_pred             CCCCCcCCC---------CcccceeeeeceeEee
Q 024661          238 YKVPSPRHA---------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       238 fg~a~~~~~---------~~~~~~~y~ape~~~~  262 (264)
                      ||++.....         ...++..|+|||++.+
T Consensus       156 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  189 (316)
T cd07842         156 LGLARLFNAPLKPLADLDPVVVTIWYRAPELLLG  189 (316)
T ss_pred             CccccccCCCcccccccCCccccccccCHHHHhC
Confidence            999875422         1235678999997643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.96  E-value=2.2e-28  Score=200.96  Aligned_cols=164  Identities=22%  Similarity=0.313  Sum_probs=140.4

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCc---EEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKE---LVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      +.|++.+.||+|+||.||+|.+..+++   .|++|.+...  ......+..|+.+++.+.|+|+     +++.+++.++.
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-----~~~~~~~~~~~   78 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNI-----IHLEGVVTKSR   78 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCc-----ceEEEEECCCC
Confidence            458999999999999999999877654   5999988743  3445688999999999999988     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      ..++||||+ +++|.+++.... ..+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++....
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~  157 (269)
T cd05065          79 PVMIITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE  157 (269)
T ss_pred             ceEEEEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccc
Confidence            999999999 889999988654 368999999999999999999999999999999999999999999999999986533


Q ss_pred             CCc--------c---cceeeeeceeEe
Q 024661          246 AFS--------F---QTFLSMASRVYI  261 (264)
Q Consensus       246 ~~~--------~---~~~~y~ape~~~  261 (264)
                      ...        .   .+..|++||.+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~  184 (269)
T cd05065         158 DDTSDPTYTSSLGGKIPIRWTAPEAIA  184 (269)
T ss_pred             cCccccccccccCCCcceeecCHhHhc
Confidence            211        1   134699999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.96  E-value=1.7e-28  Score=204.28  Aligned_cols=165  Identities=23%  Similarity=0.399  Sum_probs=140.4

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCC----------------cEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCc
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKK----------------ELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGT  153 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~----------------~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~  153 (264)
                      ++|++.+.||+|+||.||+|.+...+                ..+++|.+...  ....+.+.+|+++++.+.|+++   
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i---   81 (296)
T cd05051           5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNI---   81 (296)
T ss_pred             hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCE---
Confidence            57999999999999999999876543                45799988743  2445678899999999999887   


Q ss_pred             ceEEEceeeeeCCEEEEEEecC-CCCHHHHHHhcC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 024661          154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNS---------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPE  223 (264)
Q Consensus       154 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~  223 (264)
                        +++++++..+...+++||++ +++|.+++....         ...+++..++.++.|++.||.|||++|++|+||||+
T Consensus        82 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~  159 (296)
T cd05051          82 --ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATR  159 (296)
T ss_pred             --eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchh
Confidence              99999999999999999999 899999997643         125889999999999999999999999999999999


Q ss_pred             CEEeecCCcEEeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          224 NILLVSAEYVKVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       224 Nili~~~~~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      ||+++.++.++|+|||++.....        ...++..|||||.+.
T Consensus       160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  205 (296)
T cd05051         160 NCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVL  205 (296)
T ss_pred             ceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhh
Confidence            99999999999999999875322        122456799999754

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.96  E-value=1e-28  Score=210.09  Aligned_cols=166  Identities=21%  Similarity=0.285  Sum_probs=135.1

Q ss_pred             CCeEEEeecccCccEEEEEEEeC-----CCCcEEEEEEEech--hhhHHHHHHHHHHHHHHh-ccCCCCcceEEEceeee
Q 024661           92 PRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSI--NKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~  163 (264)
                      ++|++.+.||.|+||.||+|.+.     .+++.||+|+++..  ......+.+|+.++.++. |+|+     +++++++.
T Consensus         7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni-----v~~~~~~~   81 (343)
T cd05103           7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV-----VNLLGACT   81 (343)
T ss_pred             hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccH-----hhhcceee
Confidence            67999999999999999999853     45788999998743  234457888999999994 5666     89988775


Q ss_pred             e-CCEEEEEEecC-CCCHHHHHHhcC------------------------------------------------------
Q 024661          164 Y-RNHICIVFEKL-GPSLYDFLRKNS------------------------------------------------------  187 (264)
Q Consensus       164 ~-~~~~~lv~e~~-~~~L~~~l~~~~------------------------------------------------------  187 (264)
                      . ...++++|||+ +|+|.+++....                                                      
T Consensus        82 ~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (343)
T cd05103          82 KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV  161 (343)
T ss_pred             cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence            5 45789999999 999999987532                                                      


Q ss_pred             -----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC--------Cc
Q 024661          188 -----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA--------FS  248 (264)
Q Consensus       188 -----------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~--------~~  248 (264)
                                 ...+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||++.....        ..
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  241 (343)
T cd05103         162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDA  241 (343)
T ss_pred             hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCC
Confidence                       01367788899999999999999999999999999999999999999999999875321        11


Q ss_pred             ccceeeeeceeEee
Q 024661          249 FQTFLSMASRVYIC  262 (264)
Q Consensus       249 ~~~~~y~ape~~~~  262 (264)
                      .++..||+||.+.+
T Consensus       242 ~~~~~y~aPE~~~~  255 (343)
T cd05103         242 RLPLKWMAPETIFD  255 (343)
T ss_pred             CCCcceECcHHhcC
Confidence            23456999998643

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.96  E-value=1e-28  Score=202.00  Aligned_cols=165  Identities=22%  Similarity=0.328  Sum_probs=139.6

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      ..++|++.++||+|+||.||+|.+. .+..+++|.+.......+.+.+|+.+++.++|+++     +.+++++. ....|
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i-----~~~~~~~~-~~~~~   76 (260)
T cd05070           4 PRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKL-----VQLYAVVS-EEPIY   76 (260)
T ss_pred             chHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCce-----EEEEeEEC-CCCcE
Confidence            3467999999999999999999865 45669999987655556778999999999999887     88888775 45689


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCCc
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS  248 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~~  248 (264)
                      ++|||+ +++|.+++.......+++..+..++.|++.||.|||++|++|+||+|+||++++++.++|+|||++.......
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~  156 (260)
T cd05070          77 IVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE  156 (260)
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcc
Confidence            999999 8999999987554568999999999999999999999999999999999999999999999999987533211


Q ss_pred             -------ccceeeeeceeEe
Q 024661          249 -------FQTFLSMASRVYI  261 (264)
Q Consensus       249 -------~~~~~y~ape~~~  261 (264)
                             .++..|+|||.+.
T Consensus       157 ~~~~~~~~~~~~y~aPE~~~  176 (260)
T cd05070         157 YTARQGAKFPIKWTAPEAAL  176 (260)
T ss_pred             cccccCCCCCccccChHHHh
Confidence                   2345699999753

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=2.7e-28  Score=198.94  Aligned_cols=163  Identities=21%  Similarity=0.270  Sum_probs=143.2

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      ++|++.+.||.|+||.||+|...  ++.+++|.+.......+.+.+|+.+++.+.|+++     +++++++.+.+..++|
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~~v   78 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNL-----VQLLGVVLQGNPLYIV   78 (256)
T ss_pred             hhccceeeeecCCCceEEEEEec--CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcce-----eeeEEEEcCCCCeEEE
Confidence            56899999999999999999875  7889999998665556788999999999999887     9999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC---
Q 024661          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF---  247 (264)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~---  247 (264)
                      ||++ +++|.+++.......+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||.+......   
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~  158 (256)
T cd05039          79 TEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDS  158 (256)
T ss_pred             EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccccccccc
Confidence            9999 789999998765446899999999999999999999999999999999999999999999999998765322   


Q ss_pred             cccceeeeeceeEe
Q 024661          248 SFQTFLSMASRVYI  261 (264)
Q Consensus       248 ~~~~~~y~ape~~~  261 (264)
                      ...+..|+|||.+.
T Consensus       159 ~~~~~~~~ape~~~  172 (256)
T cd05039         159 GKLPVKWTAPEALR  172 (256)
T ss_pred             CCCcccccCchhhc
Confidence            12345699999764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.96  E-value=2.4e-28  Score=202.06  Aligned_cols=165  Identities=18%  Similarity=0.322  Sum_probs=137.8

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh--hhHHHHHHHHHH-HHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDV-LQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~-l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|.++...  .....+..|+.. ++.+.|+|+     +++++++..++.+
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i-----v~~~~~~~~~~~~   75 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYT-----VTFYGALFREGDV   75 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCe-----eeeeEEEecCCcE
Confidence            36999999999999999999999999999999987532  223445556654 455566766     9999999999999


Q ss_pred             EEEEecCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          169 CIVFEKLGPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      |++|||+.++|.+++...  ....+++..++.++.||+.||+|||++ +++|+||||+||+++.++.+||+|||++....
T Consensus        76 ~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~  155 (283)
T cd06617          76 WICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLV  155 (283)
T ss_pred             EEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence            999999988998888642  224689999999999999999999997 99999999999999999999999999987543


Q ss_pred             C-----CcccceeeeeceeEe
Q 024661          246 A-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ~-----~~~~~~~y~ape~~~  261 (264)
                      .     ...++..|++||.+.
T Consensus       156 ~~~~~~~~~~~~~y~aPE~~~  176 (283)
T cd06617         156 DSVAKTIDAGCKPYMAPERIN  176 (283)
T ss_pred             cccccccccCCccccChhhcC
Confidence            2     234677899999874

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.96  E-value=9.8e-29  Score=204.85  Aligned_cols=165  Identities=21%  Similarity=0.341  Sum_probs=143.0

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      ++|++++.||+|+||.||+|.+..++..+++|.+...  ......+.+|+++++.+.|+|+     +++++.+...+.+|
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~~~   75 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYI-----VDFYGAFFIEGAVY   75 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcH-----HhhhhheecCCeEE
Confidence            3688999999999999999999999999999988642  2334678889999999999888     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEeecCCcEEeccCCCCCcCC-
Q 024661          170 IVFEKL-GPSLYDFLRKNS-YRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH-  245 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~-  245 (264)
                      +||||+ +++|.+++.... ...+++..+..++.|++.||.|||+ .||+|+||||+||+++.++.++|+|||++.... 
T Consensus        76 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  155 (286)
T cd06622          76 MCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVA  155 (286)
T ss_pred             EEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccC
Confidence            999999 889999887642 2368999999999999999999997 599999999999999999999999999986532 


Q ss_pred             ---CCcccceeeeeceeEe
Q 024661          246 ---AFSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ---~~~~~~~~y~ape~~~  261 (264)
                         ....++..|+|||.+.
T Consensus       156 ~~~~~~~~~~~y~aPE~~~  174 (286)
T cd06622         156 SLAKTNIGCQSYMAPERIK  174 (286)
T ss_pred             CccccCCCccCccCcchhc
Confidence               2334677899999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.96  E-value=2.4e-28  Score=202.88  Aligned_cols=166  Identities=20%  Similarity=0.311  Sum_probs=140.6

Q ss_pred             CCeEEEeecccCccEEEEEEEeC-----CCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .+|.+.+.||+|+||.||++.+.     .++..+++|.+... ....+.+.+|+++++.+.|+++     +++++++...
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~   79 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI-----VKFYGVCVEG   79 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEecC
Confidence            46999999999999999999853     34567899988643 3445678899999999999988     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcC-----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcE
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNS-----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV  233 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~-----------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v  233 (264)
                      +.+|+||||+ +++|.+++....           ...+++..++.++.|++.||+|||++|++||||||+|||++.++.+
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~  159 (288)
T cd05093          80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV  159 (288)
T ss_pred             CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcE
Confidence            9999999999 899999997542           1248999999999999999999999999999999999999999999


Q ss_pred             EeccCCCCCcCCC--------CcccceeeeeceeEee
Q 024661          234 KVPDYKVPSPRHA--------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       234 ~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~~  262 (264)
                      +|+|||++.....        ...++..|+|||.+.+
T Consensus       160 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  196 (288)
T cd05093         160 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY  196 (288)
T ss_pred             EeccCCccccccCCceeecCCCCCccccccCHHHhcc
Confidence            9999999875422        1223567999997653

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.96  E-value=1.5e-28  Score=204.82  Aligned_cols=165  Identities=23%  Similarity=0.373  Sum_probs=138.4

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCC--------------CcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcce
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEK--------------KELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRC  155 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~--------------~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~  155 (264)
                      ++|++.+.||+|+||.||+|.+..+              ...||+|.++..  ....+.+.+|+++++.+.|+++     
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i-----   79 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNI-----   79 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCc-----
Confidence            5799999999999999999987543              235899988643  3345678899999999999888     


Q ss_pred             EEEceeeeeCCEEEEEEecC-CCCHHHHHHhcC----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 024661          156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNS----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPEN  224 (264)
Q Consensus       156 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~----------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~N  224 (264)
                      +++++++...+..++||||+ +++|.+++....          ...+++..++.++.|++.||.|||++|++|+||||+|
T Consensus        80 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~N  159 (295)
T cd05097          80 IRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRN  159 (295)
T ss_pred             CeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhh
Confidence            99999999999999999999 899999986532          1136788899999999999999999999999999999


Q ss_pred             EEeecCCcEEeccCCCCCcCCCC--------cccceeeeeceeEe
Q 024661          225 ILLVSAEYVKVPDYKVPSPRHAF--------SFQTFLSMASRVYI  261 (264)
Q Consensus       225 ili~~~~~v~l~Dfg~a~~~~~~--------~~~~~~y~ape~~~  261 (264)
                      |+++.++.+||+|||++......        ..++..|+|||++.
T Consensus       160 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  204 (295)
T cd05097         160 CLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESIL  204 (295)
T ss_pred             EEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhc
Confidence            99999999999999998754321        12356799999764

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=3.9e-28  Score=199.05  Aligned_cols=164  Identities=28%  Similarity=0.385  Sum_probs=141.5

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech------hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI------NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .+|++.+.||+|+||.||+|.+..+++.+++|.+...      ......+.+|+.+++.++|+++     +++++++.+.
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i-----~~~~~~~~~~   76 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRI-----VQYYGCLRDP   76 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCc-----ceEEEEEEcC
Confidence            4699999999999999999999999999999987521      2344578889999999999888     8999888663


Q ss_pred             --CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          166 --NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       166 --~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                        +.++++||++ +++|.+++....  .+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.
T Consensus        77 ~~~~~~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~  154 (264)
T cd06653          77 EEKKLSIFVEYMPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASK  154 (264)
T ss_pred             CCCEEEEEEEeCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccc
Confidence              5789999999 889999998754  58899999999999999999999999999999999999999999999999997


Q ss_pred             cCCC---------CcccceeeeeceeEee
Q 024661          243 PRHA---------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       243 ~~~~---------~~~~~~~y~ape~~~~  262 (264)
                      ....         ...++..|++||.+.+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  183 (264)
T cd06653         155 RIQTICMSGTGIKSVTGTPYWMSPEVISG  183 (264)
T ss_pred             ccccccccCccccccCCcccccCHhhhcC
Confidence            5422         1246778999998754

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.96  E-value=1.1e-28  Score=210.15  Aligned_cols=167  Identities=25%  Similarity=0.348  Sum_probs=143.2

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      +--.++..+.++||+|.||.|.+|.-. .+..||+|.++..  ...+..|.+|+++|.+|+|||+     +.+++.|..+
T Consensus       534 EfPRs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNI-----veLvGVC~~D  607 (807)
T KOG1094|consen  534 EFPRSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNI-----VELLGVCVQD  607 (807)
T ss_pred             hcchhheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCe-----eEEEeeeecC
Confidence            344467889999999999999999854 3688999999843  3456899999999999999998     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      +.+|+++||+ .|+|.+++..+.......+....|+.||+.||+||.+.++|||||.++|+|++.++++||+|||+++..
T Consensus       608 ePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~l  687 (807)
T KOG1094|consen  608 DPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNL  687 (807)
T ss_pred             CchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCccccccc
Confidence            9999999999 999999999886445566677889999999999999999999999999999999999999999999864


Q ss_pred             CCCcc--------cceeeeeceeE
Q 024661          245 HAFSF--------QTFLSMASRVY  260 (264)
Q Consensus       245 ~~~~~--------~~~~y~ape~~  260 (264)
                      -...+        -...|||+|.+
T Consensus       688 ysg~yy~vqgr~vlpiRwmawEsi  711 (807)
T KOG1094|consen  688 YSGDYYRVQGRAVLPIRWMAWESI  711 (807)
T ss_pred             ccCCceeeecceeeeeeehhHHHH
Confidence            33221        12469999964

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.96  E-value=3.6e-28  Score=198.17  Aligned_cols=164  Identities=24%  Similarity=0.385  Sum_probs=144.5

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      +|++.+.||+|+||.+|++.+..+++.+++|.+...   ......+.+|+.+++.++|+++     +++.+++...+..|
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~   75 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNI-----VQYQESFEENGNLY   75 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCe-----eeeEeeecCCCeEE
Confidence            589999999999999999999999999999998743   2345678899999999999887     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC-
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF-  247 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~-  247 (264)
                      +||||+ +++|.+++.......+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++...... 
T Consensus        76 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~  155 (256)
T cd08218          76 IVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV  155 (256)
T ss_pred             EEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence            999999 899999998755456899999999999999999999999999999999999999999999999998754332 


Q ss_pred             -----cccceeeeeceeEe
Q 024661          248 -----SFQTFLSMASRVYI  261 (264)
Q Consensus       248 -----~~~~~~y~ape~~~  261 (264)
                           ..++..|++||++.
T Consensus       156 ~~~~~~~~~~~~~~pe~~~  174 (256)
T cd08218         156 ELARTCIGTPYYLSPEICE  174 (256)
T ss_pred             hhhhhccCCccccCHHHhC
Confidence                 23667899999764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.96  E-value=1.5e-28  Score=201.63  Aligned_cols=162  Identities=28%  Similarity=0.382  Sum_probs=141.5

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----------hhHHHHHHHHHHHHHHhccCCCCcceEEEceee
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----------~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~  162 (264)
                      +|.+...||.|++|.||+|.+..+++.+++|.+....          ...+.+.+|+.+++.++|+++     +++++++
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~   75 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENI-----VQYLGSS   75 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCe-----eeEEEEE
Confidence            4788899999999999999998889999999886321          223567889999999999888     9999999


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCC
Q 024661          163 DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVP  241 (264)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a  241 (264)
                      ...+..+++|||+ +++|.+++....  .+++..+..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++
T Consensus        76 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~  153 (267)
T cd06628          76 LDADHLNIFLEYVPGGSVAALLNNYG--AFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGIS  153 (267)
T ss_pred             EeCCccEEEEEecCCCCHHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCC
Confidence            9999999999999 889999998764  6899999999999999999999999999999999999999999999999998


Q ss_pred             CcCCC------------CcccceeeeeceeEe
Q 024661          242 SPRHA------------FSFQTFLSMASRVYI  261 (264)
Q Consensus       242 ~~~~~------------~~~~~~~y~ape~~~  261 (264)
                      .....            ...++..|++||.+.
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~  185 (267)
T cd06628         154 KKLEANSLSTKTNGARPSLQGSVFWMAPEVVK  185 (267)
T ss_pred             cccccccccCCccccccccCCCcCccChhHhc
Confidence            76542            123567799999764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.96  E-value=5.3e-28  Score=200.96  Aligned_cols=168  Identities=26%  Similarity=0.382  Sum_probs=143.1

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeC--
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYR--  165 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~--  165 (264)
                      ...++|.+.+.||+|+||.||+|.+..+++.+++|++.........+.+|+.+++.+ +|+|+     +++++++...  
T Consensus        19 ~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni-----~~~~~~~~~~~~   93 (291)
T cd06639          19 DPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNV-----VKFYGMFYKADK   93 (291)
T ss_pred             CCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCe-----EEEEEEEEeccc
Confidence            456789999999999999999999999999999999876544556778899999988 67776     9999888653  


Q ss_pred             ---CEEEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          166 ---NHICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       166 ---~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                         +.+|+||||+ +++|.+++...  ....+++..++.++.|++.||.|||+.|++|+||||+||+++.++.++|+|||
T Consensus        94 ~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg  173 (291)
T cd06639          94 LVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFG  173 (291)
T ss_pred             cCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecc
Confidence               4689999999 88999988642  22468999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCC------CcccceeeeeceeEe
Q 024661          240 VPSPRHA------FSFQTFLSMASRVYI  261 (264)
Q Consensus       240 ~a~~~~~------~~~~~~~y~ape~~~  261 (264)
                      ++.....      ...++..|++||.+.
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~  201 (291)
T cd06639         174 VSAQLTSTRLRRNTSVGTPFWMAPEVIA  201 (291)
T ss_pred             cchhcccccccccCccCCccccChhhhc
Confidence            9875332      234677899999864

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.96  E-value=2.8e-28  Score=203.93  Aligned_cols=169  Identities=17%  Similarity=0.262  Sum_probs=140.3

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeC-------CCCcEEEEEEEech--hhhHHHHHHHHHHHHHH-hccCCCCcceEEE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDN-------EKKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQI  158 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~  158 (264)
                      ...++|.+.+.||+|+||.||+|++.       ..+..+++|.+...  ......+.+|+.+++.+ .|+|+     +++
T Consensus        12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----~~~   86 (304)
T cd05101          12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI-----INL   86 (304)
T ss_pred             ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCc-----hhe
Confidence            34567999999999999999999753       23457999988643  33456788999999999 78887     999


Q ss_pred             ceeeeeCCEEEEEEecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 024661          159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPE  223 (264)
Q Consensus       159 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~  223 (264)
                      ++++......|++|||+ +++|.+++.+..              ...+++..+..++.||+.||.|||++|++|+||||+
T Consensus        87 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~  166 (304)
T cd05101          87 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAAR  166 (304)
T ss_pred             eEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccc
Confidence            99999999999999999 889999998642              124778889999999999999999999999999999


Q ss_pred             CEEeecCCcEEeccCCCCCcCCC--------CcccceeeeeceeEee
Q 024661          224 NILLVSAEYVKVPDYKVPSPRHA--------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       224 Nili~~~~~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~~  262 (264)
                      ||+++.++.++|+|||+++....        ...++..|+|||++.+
T Consensus       167 Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  213 (304)
T cd05101         167 NVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFD  213 (304)
T ss_pred             eEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhcc
Confidence            99999999999999999875432        1224567999997643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.96  E-value=2.9e-28  Score=202.69  Aligned_cols=166  Identities=21%  Similarity=0.331  Sum_probs=139.6

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCC-----CcEEEEEEEech--hhhHHHHHHHHHHHHHH-hccCCCCcceEEEceee
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWF  162 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~  162 (264)
                      .++|++.+.||+|+||.||++.+...     ...+++|.+...  ......+.+|+++++.+ +|+|+     +++++++
T Consensus        11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----~~~~~~~   85 (293)
T cd05053          11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI-----INLLGVC   85 (293)
T ss_pred             HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCe-----eeEEEEE
Confidence            36799999999999999999987643     367999988743  23345678899999999 68777     9999999


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHHhc--------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEe
Q 024661          163 DYRNHICIVFEKL-GPSLYDFLRKN--------------SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL  227 (264)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~--------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili  227 (264)
                      ..++.++++|||+ +++|.+++...              ....+++..++.++.|++.||.|||++||+|+||||+|||+
T Consensus        86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~  165 (293)
T cd05053          86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV  165 (293)
T ss_pred             cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEE
Confidence            9999999999999 89999999742              23468899999999999999999999999999999999999


Q ss_pred             ecCCcEEeccCCCCCcCCCC--------cccceeeeeceeEe
Q 024661          228 VSAEYVKVPDYKVPSPRHAF--------SFQTFLSMASRVYI  261 (264)
Q Consensus       228 ~~~~~v~l~Dfg~a~~~~~~--------~~~~~~y~ape~~~  261 (264)
                      +.++.++|+|||++......        ..++..|+|||++.
T Consensus       166 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  207 (293)
T cd05053         166 TEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALF  207 (293)
T ss_pred             cCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhc
Confidence            99999999999999764321        12345699999764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.96  E-value=2.7e-28  Score=201.96  Aligned_cols=162  Identities=24%  Similarity=0.365  Sum_probs=136.5

Q ss_pred             CCe-EEEeecccCccEEEEEEEe----CCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           92 PRY-RILSKMGEGTFGQVVECFD----NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        92 ~~y-~~~~~lg~G~~g~V~~~~~----~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ++| ++.+.||+|+||+||++..    ..++..+|+|.++...  .....+.+|+++++.++|+++     +++++++..
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~   77 (283)
T cd05080           3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENI-----VKYKGCCSE   77 (283)
T ss_pred             hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEec
Confidence            456 9999999999999988753    3467889999987532  345677889999999999887     999988765


Q ss_pred             --CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCC
Q 024661          165 --RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVP  241 (264)
Q Consensus       165 --~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a  241 (264)
                        ...++++|||+ +++|.+++...   .+++..++.++.|++.||.|||++||+|+||||+|||++.++.++|+|||++
T Consensus        78 ~~~~~~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~  154 (283)
T cd05080          78 QGGKGLQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLA  154 (283)
T ss_pred             CCCceEEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccc
Confidence              34689999999 89999999764   4899999999999999999999999999999999999999999999999998


Q ss_pred             CcCCC---------CcccceeeeeceeEe
Q 024661          242 SPRHA---------FSFQTFLSMASRVYI  261 (264)
Q Consensus       242 ~~~~~---------~~~~~~~y~ape~~~  261 (264)
                      .....         ...++..|++||.+.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~  183 (283)
T cd05080         155 KAVPEGHEYYRVREDGDSPVFWYAVECLK  183 (283)
T ss_pred             cccCCcchhhccCCCCCCCceeeCHhHhc
Confidence            76432         123456799999764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.96  E-value=3.1e-28  Score=199.97  Aligned_cols=164  Identities=22%  Similarity=0.284  Sum_probs=139.8

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCC---cEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKK---ELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~---~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      ++|++.+.||+|+||.||+|.+..++   ..+++|.++..  ....+.+.+|+.+++.++|+|+     +++++++..++
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~   78 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNI-----IHLEGVVTKSK   78 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEecCC
Confidence            56999999999999999999986544   36899988643  2345678889999999999888     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      ..|+||||+ +++|.+++.... ..+++..+..++.|++.||.|||++|++|+||||+|||++.++.++|+|||++....
T Consensus        79 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~  157 (267)
T cd05066          79 PVMIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLE  157 (267)
T ss_pred             ccEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence            999999999 889999998654 358999999999999999999999999999999999999999999999999987533


Q ss_pred             CCc---------ccceeeeeceeEe
Q 024661          246 AFS---------FQTFLSMASRVYI  261 (264)
Q Consensus       246 ~~~---------~~~~~y~ape~~~  261 (264)
                      ...         ..+..|++||.+.
T Consensus       158 ~~~~~~~~~~~~~~~~~y~~pe~~~  182 (267)
T cd05066         158 DDPEAAYTTRGGKIPIRWTAPEAIA  182 (267)
T ss_pred             cccceeeecCCCccceeecCHhHhc
Confidence            211         1235699999764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.96  E-value=1.2e-28  Score=203.57  Aligned_cols=165  Identities=21%  Similarity=0.311  Sum_probs=140.6

Q ss_pred             CCeEEEeecccCccEEEEEEEeCC-----CCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ++|.+.+.||+|+||.||+|.+..     +++.+++|.++...  ...+.+.+|+++++.+.|+++     +.+++++..
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~   79 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENI-----VKFYGVCTE   79 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCc-----hheeeEEec
Confidence            568999999999999999998743     35789999987532  245788999999999999888     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcC------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNS------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~  231 (264)
                      ....|+||||+ +++|.+++....            ...+++..+..++.|++.||.|||++|++|+||||+||+++.++
T Consensus        80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~  159 (280)
T cd05049          80 GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDL  159 (280)
T ss_pred             CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCC
Confidence            99999999999 999999997542            13478889999999999999999999999999999999999999


Q ss_pred             cEEeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          232 YVKVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       232 ~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      .++|+|||++.....        ....+..|+|||++.
T Consensus       160 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  197 (280)
T cd05049         160 VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIM  197 (280)
T ss_pred             eEEECCcccceecccCcceecCCCCcccceecChhhhc
Confidence            999999999875322        122356799999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.96  E-value=2e-28  Score=211.63  Aligned_cols=165  Identities=22%  Similarity=0.339  Sum_probs=137.8

Q ss_pred             CCeEEEeecccCccEEEEEEEeC-----CCCcEEEEEEEech--hhhHHHHHHHHHHHHHHh-ccCCCCcceEEEceeee
Q 024661           92 PRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSI--NKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~  163 (264)
                      ++|.+.++||+|+||.||+|++.     .+++.||+|+++..  ....+.+.+|+.++..+. |+|+     +++++.+.
T Consensus        37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~ni-----v~~~~~~~  111 (401)
T cd05107          37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNI-----VNLLGACT  111 (401)
T ss_pred             HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCe-----EEEEEEEc
Confidence            46888999999999999999864     34568999999743  233457889999999997 8877     99999999


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhcCC------------------------------------------------------
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKNSY------------------------------------------------------  188 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~------------------------------------------------------  188 (264)
                      ..+..++||||+ +|+|.+++.....                                                      
T Consensus       112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (401)
T cd05107         112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP  191 (401)
T ss_pred             cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence            999999999999 9999999975321                                                      


Q ss_pred             ------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 024661          189 ------------------------------------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENIL  226 (264)
Q Consensus       189 ------------------------------------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nil  226 (264)
                                                                ..+++..++.++.||+.||.|||+.+++||||||+|||
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiL  271 (401)
T cd05107         192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVL  271 (401)
T ss_pred             hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEE
Confidence                                                      13567778899999999999999999999999999999


Q ss_pred             eecCCcEEeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          227 LVSAEYVKVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       227 i~~~~~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      ++.++.++|+|||+++....        ...++..||+||.+.
T Consensus       272 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~  314 (401)
T cd05107         272 ICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIF  314 (401)
T ss_pred             EeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhc
Confidence            99999999999999875321        223556799999764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.96  E-value=2.7e-28  Score=203.93  Aligned_cols=167  Identities=23%  Similarity=0.325  Sum_probs=141.0

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeC-----CCCcEEEEEEEech--hhhHHHHHHHHHHHHHH-hccCCCCcceEEEcee
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNW  161 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~  161 (264)
                      ..++|.+.+.||+|+||.||+|.+.     .++..+|+|.++..  ....+.+.+|+.+++++ +|+|+     ++++++
T Consensus        33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----v~~~~~  107 (302)
T cd05055          33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENI-----VNLLGA  107 (302)
T ss_pred             cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCc-----ceEEEE
Confidence            3367999999999999999999853     34567999988743  33456788999999999 68887     999999


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCC
Q 024661          162 FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV  240 (264)
Q Consensus       162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~  240 (264)
                      +...+..|++|||+ +++|.+++.......+++..+..++.|++.||.|||+++|+|+||||+|||++.++.++|+|||+
T Consensus       108 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~  187 (302)
T cd05055         108 CTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGL  187 (302)
T ss_pred             EecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcc
Confidence            99999999999999 89999999865433489999999999999999999999999999999999999999999999999


Q ss_pred             CCcCCC--------CcccceeeeeceeEe
Q 024661          241 PSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       241 a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      +.....        ...++..|+|||.+.
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  216 (302)
T cd05055         188 ARDIMNDSNYVVKGNARLPVKWMAPESIF  216 (302)
T ss_pred             cccccCCCceeecCCCCcccccCCHhhhc
Confidence            875322        122456799999764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.96  E-value=2e-28  Score=208.27  Aligned_cols=165  Identities=22%  Similarity=0.383  Sum_probs=142.6

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .+.++|++.+.||+|+||.||+|.+..++..||+|.+...   ......+.+|+.+++.+.|+|+     +++++.+...
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~   86 (343)
T cd07880          12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENV-----IGLLDVFTPD   86 (343)
T ss_pred             ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCc-----cceeeeecCC
Confidence            4678899999999999999999999999999999988642   2334567889999999999988     8888888654


Q ss_pred             C------EEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          166 N------HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       166 ~------~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                      .      .+++|||+++++|.+++...   .+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||
T Consensus        87 ~~~~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg  163 (343)
T cd07880          87 LSLDRFHDFYLVMPFMGTDLGKLMKHE---KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFG  163 (343)
T ss_pred             ccccccceEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecc
Confidence            3      46999999998999888753   58999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCCC---cccceeeeeceeEe
Q 024661          240 VPSPRHAF---SFQTFLSMASRVYI  261 (264)
Q Consensus       240 ~a~~~~~~---~~~~~~y~ape~~~  261 (264)
                      ++......   ..++..|++||.+.
T Consensus       164 ~~~~~~~~~~~~~~~~~y~aPE~~~  188 (343)
T cd07880         164 LARQTDSEMTGYVVTRWYRAPEVIL  188 (343)
T ss_pred             cccccccCccccccCCcccCHHHHh
Confidence            99765432   23577899999764

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.96  E-value=3.2e-28  Score=201.40  Aligned_cols=164  Identities=26%  Similarity=0.441  Sum_probs=142.2

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      +|++.+.||.|++|.||+|++..+|+.+++|.++...  .....+.+|+.+++.++|+|+     +++++++.+.+..++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~~~l   75 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENI-----VRLHDVIHTENKLML   75 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCE-----eeeeeeEeeCCcEEE
Confidence            4899999999999999999999999999999987432  234566789999999998887     999999999999999


Q ss_pred             EEecCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---
Q 024661          171 VFEKLGPSLYDFLRKNS-YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---  246 (264)
Q Consensus       171 v~e~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---  246 (264)
                      ||||+.++|.+++.... ...+++..+..++.|++.||.|||+.|++|+||+|+||++++++.++|+|||++.....   
T Consensus        76 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~  155 (284)
T cd07836          76 VFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN  155 (284)
T ss_pred             EEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc
Confidence            99999779999887543 23589999999999999999999999999999999999999999999999999864321   


Q ss_pred             ---CcccceeeeeceeEe
Q 024661          247 ---FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~  261 (264)
                         ...++..|++||.+.
T Consensus       156 ~~~~~~~~~~y~~PE~~~  173 (284)
T cd07836         156 TFSNEVVTLWYRAPDVLL  173 (284)
T ss_pred             ccccccccccccChHHhc
Confidence               234577899999764

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.96  E-value=4.5e-28  Score=198.20  Aligned_cols=166  Identities=24%  Similarity=0.329  Sum_probs=141.3

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ...++|++.++||+|+||.||++.+. .+..+++|.+.......+.+.+|+.+++.+.|+++     +++++.+.+ ...
T Consensus         3 ~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~-~~~   75 (260)
T cd05073           3 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKL-----VKLHAVVTK-EPI   75 (260)
T ss_pred             ccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCc-----ceEEEEEcC-CCe
Confidence            34578999999999999999999865 44569999887655556788899999999999988     888888877 788


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF  247 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~  247 (264)
                      +++|||+ +++|.+++.......+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+......
T Consensus        76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  155 (260)
T cd05073          76 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN  155 (260)
T ss_pred             EEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence            9999999 889999998765556888999999999999999999999999999999999999999999999998654321


Q ss_pred             -------cccceeeeeceeEe
Q 024661          248 -------SFQTFLSMASRVYI  261 (264)
Q Consensus       248 -------~~~~~~y~ape~~~  261 (264)
                             ..++..|++||++.
T Consensus       156 ~~~~~~~~~~~~~y~~PE~~~  176 (260)
T cd05073         156 EYTAREGAKFPIKWTAPEAIN  176 (260)
T ss_pred             CcccccCCcccccccCHhHhc
Confidence                   12345699999764

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.96  E-value=3.5e-28  Score=201.93  Aligned_cols=163  Identities=23%  Similarity=0.361  Sum_probs=140.1

Q ss_pred             CeEEEeecccCccEEEEEEEeC---CCCcEEEEEEEechh-----hhHHHHHHHHHHHHHHh-ccCCCCcceEEEceeee
Q 024661           93 RYRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~  163 (264)
                      .|++.+.||.|+||.||+|.+.   .+|+.||+|++....     ...+.+.+|+.+++.+. |+++     +.+++.+.
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i-----~~~~~~~~   75 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL-----VTLHYAFQ   75 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCCh-----hceeeEee
Confidence            3889999999999999999875   468899999987432     23466788999999995 6666     88999999


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                      .+..+|+||||+ +++|.+++....  .+++..+..++.|++.||.|||+.|++|+||+|+|||++.++.++|+|||++.
T Consensus        76 ~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~  153 (290)
T cd05613          76 TDTKLHLILDYINGGELFTHLSQRE--RFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK  153 (290)
T ss_pred             cCCeEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccce
Confidence            999999999999 899999998765  68899999999999999999999999999999999999999999999999987


Q ss_pred             cCCC-------CcccceeeeeceeEee
Q 024661          243 PRHA-------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       243 ~~~~-------~~~~~~~y~ape~~~~  262 (264)
                      ....       ...++..|++||.+.+
T Consensus       154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~  180 (290)
T cd05613         154 EFHEDEVERAYSFCGTIEYMAPDIVRG  180 (290)
T ss_pred             ecccccccccccccCCcccCChhhccC
Confidence            6433       1236778999998753

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.96  E-value=2.6e-28  Score=201.25  Aligned_cols=167  Identities=19%  Similarity=0.297  Sum_probs=140.5

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCC-----CcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceee
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~  162 (264)
                      ..++|++.+.||+|+||.||+|.+...     +..+++|.+....  .....+.+|+.+++.+.|+++     +++++++
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~   78 (277)
T cd05032           4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHV-----VRLLGVV   78 (277)
T ss_pred             chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCce-----eEEEEEE
Confidence            346799999999999999999998644     3789999986432  334567889999999998887     9999999


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcE
Q 024661          163 DYRNHICIVFEKL-GPSLYDFLRKNS--------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV  233 (264)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~--------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v  233 (264)
                      ......|+||||+ +++|.+++....        ...+++..+..++.|++.||.|||+.|++|+||||+||+++.++.+
T Consensus        79 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~  158 (277)
T cd05032          79 STGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTV  158 (277)
T ss_pred             cCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCE
Confidence            9999999999999 899999997532        1236788999999999999999999999999999999999999999


Q ss_pred             EeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          234 KVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       234 ~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      +|+|||+++....        ...++..|+|||.+.
T Consensus       159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  194 (277)
T cd05032         159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLK  194 (277)
T ss_pred             EECCcccchhhccCcccccCCCCCccccccCHHHHh
Confidence            9999999875322        223466799999753

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.96  E-value=2.8e-28  Score=200.61  Aligned_cols=163  Identities=26%  Similarity=0.383  Sum_probs=141.7

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-----------hhHHHHHHHHHHHHHHhccCCCCcceEEEcee
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNW  161 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----------~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~  161 (264)
                      +|.+.+.||.|+||.||+|.+..+++.+++|.++...           ...+.+.+|+.+++.++|+++     ++++++
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~   76 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNI-----VQYLGF   76 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCc-----ceEEEE
Confidence            5889999999999999999999899999999875321           123467789999999999888     999999


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCC
Q 024661          162 FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV  240 (264)
Q Consensus       162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~  240 (264)
                      +...+..++||||+ +++|.+++....  .+++..+..++.||+.||.|||+++++|+||+|+||+++.++.++|+|||+
T Consensus        77 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~  154 (272)
T cd06629          77 ETTEEYLSIFLEYVPGGSIGSCLRTYG--RFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGI  154 (272)
T ss_pred             eccCCceEEEEecCCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccc
Confidence            99999999999999 999999998764  789999999999999999999999999999999999999999999999999


Q ss_pred             CCcCCC--------CcccceeeeeceeEee
Q 024661          241 PSPRHA--------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       241 a~~~~~--------~~~~~~~y~ape~~~~  262 (264)
                      +.....        ...++..|++||.+.+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  184 (272)
T cd06629         155 SKKSDDIYDNDQNMSMQGSVFWMAPEVIHS  184 (272)
T ss_pred             cccccccccccccccccCCccccCHHHhcc
Confidence            875432        1236678999997653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.96  E-value=2e-28  Score=205.90  Aligned_cols=160  Identities=23%  Similarity=0.383  Sum_probs=131.3

Q ss_pred             EeecccCccEEEEEEEeCC--CCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee--CCEEEEEE
Q 024661           97 LSKMGEGTFGQVVECFDNE--KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--RNHICIVF  172 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~--~~~~~lv~  172 (264)
                      ..+||+|+||.||+|.+..  ++..+|+|.+.... ....+.+|+.+++.++|+|+     +++++++..  +..+|+||
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~~~~~lv~   79 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-ISMSACREIALLRELKHPNV-----IALQKVFLSHSDRKVWLLF   79 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-CcHHHHHHHHHHHhCCCCCe-----eeEEEEEeccCCCeEEEEE
Confidence            4689999999999999654  56789999886533 23457789999999999988     999988743  57889999


Q ss_pred             ecCCCCHHHHHHhc-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEe----ecCCcEEeccCCCC
Q 024661          173 EKLGPSLYDFLRKN-------SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL----VSAEYVKVPDYKVP  241 (264)
Q Consensus       173 e~~~~~L~~~l~~~-------~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili----~~~~~v~l~Dfg~a  241 (264)
                      ||++++|.+++...       ....+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||++
T Consensus        80 e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07867          80 DYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             eeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence            99988999888632       12248899999999999999999999999999999999999    45679999999999


Q ss_pred             CcCCC---------CcccceeeeeceeEee
Q 024661          242 SPRHA---------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       242 ~~~~~---------~~~~~~~y~ape~~~~  262 (264)
                      +....         ...+|..|+|||++.+
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  189 (317)
T cd07867         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLG  189 (317)
T ss_pred             eccCCCcccccccCcceecccccCcHHhcC
Confidence            75432         1246788999998754

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.96  E-value=2.2e-28  Score=200.92  Aligned_cols=159  Identities=19%  Similarity=0.240  Sum_probs=130.2

Q ss_pred             eecccCccEEEEEEEeCC--CCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEe
Q 024661           98 SKMGEGTFGQVVECFDNE--KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE  173 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e  173 (264)
                      ++||+|+||.||+|....  ....+++|.+...  ......+.+|+.+++.++|+|+     +++++.+.+...+|+|||
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~ni-----i~~~~~~~~~~~~~lv~e   75 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNV-----LQCLGQCIESIPYLLVLE   75 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCc-----ceEEEEECCCCceEEEEE
Confidence            369999999999997533  3456888876532  2334567889999999999888     999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---
Q 024661          174 KL-GPSLYDFLRKNSY---RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---  246 (264)
Q Consensus       174 ~~-~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---  246 (264)
                      |+ +++|.+++.....   ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....   
T Consensus        76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~  155 (269)
T cd05042          76 FCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY  155 (269)
T ss_pred             eCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchh
Confidence            99 8999999986531   2346788899999999999999999999999999999999999999999999865322   


Q ss_pred             -----CcccceeeeeceeEe
Q 024661          247 -----FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 -----~~~~~~~y~ape~~~  261 (264)
                           ...++..|+|||++.
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~  175 (269)
T cd05042         156 YITKDCHAVPLRWLAPELVE  175 (269)
T ss_pred             eeccCCCCCcccccCHHHHh
Confidence                 122455699999763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.96  E-value=3.8e-28  Score=198.18  Aligned_cols=162  Identities=21%  Similarity=0.320  Sum_probs=137.7

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceee-eeCCEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF-DYRNHICI  170 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~-~~~~~~~l  170 (264)
                      ++|++.+.||+|+||.||++...  +..+++|.++.. ...+.+.+|+.+++.+.|+++     +++++++ ...+..++
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~~l   77 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNL-----VQLLGVIVEEKGGLYI   77 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCC-chHHHHHHHHHHHHhCCCCCe-----eeEEEEEEcCCCceEE
Confidence            46999999999999999999765  677999988643 335678899999999999887     8888865 45677999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---  246 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---  246 (264)
                      +|||+ +++|.+++.......+++..++.++.|++.||+|||++|++|+||||+||+++.++.++|+|||++.....   
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~  157 (256)
T cd05082          78 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD  157 (256)
T ss_pred             EEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccCC
Confidence            99999 88999999876545688999999999999999999999999999999999999999999999999876433   


Q ss_pred             CcccceeeeeceeEe
Q 024661          247 FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ~~~~~~~y~ape~~~  261 (264)
                      ....+..|||||++.
T Consensus       158 ~~~~~~~y~aPE~~~  172 (256)
T cd05082         158 TGKLPVKWTAPEALR  172 (256)
T ss_pred             CCccceeecCHHHHc
Confidence            223455799999754

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.96  E-value=6.8e-29  Score=191.48  Aligned_cols=167  Identities=20%  Similarity=0.196  Sum_probs=144.4

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee-----
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-----  164 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~-----  164 (264)
                      .+||++.+.||+|+|+.||+++...+++.+|+|.+.-. ....+..++|++..+.++|+|+     ++++++...     
T Consensus        20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~v-----l~l~dh~l~~~~D~   94 (302)
T KOG2345|consen   20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNV-----LRLVDHQLREEKDG   94 (302)
T ss_pred             CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcch-----HHHHHHHHHhhccC
Confidence            47899999999999999999999999999999988743 4667888999999999999988     777776533     


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEeecCCcEEeccCC
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                      ....||+++|. .|+|.+.+...  ++..+++..++.|+.+|++||++||+..  +.||||||.|||+.+++.++|.|||
T Consensus        95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~G  174 (302)
T KOG2345|consen   95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLG  174 (302)
T ss_pred             ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEecc
Confidence            45699999999 99999999854  3446999999999999999999999998  9999999999999999999999999


Q ss_pred             CCCcCCC---------------CcccceeeeeceeEee
Q 024661          240 VPSPRHA---------------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       240 ~a~~~~~---------------~~~~~~~y~ape~~~~  262 (264)
                      .++...-               ...-|..|.|||++-|
T Consensus       175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~v  212 (302)
T KOG2345|consen  175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNV  212 (302)
T ss_pred             CccccceEeechHHHHHHHHHHHHhCCCcccCchheec
Confidence            9976322               1124677999999865

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.96  E-value=2.6e-28  Score=202.34  Aligned_cols=165  Identities=30%  Similarity=0.526  Sum_probs=141.1

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ++|++.+.||+|++|.||+|.+..+++.|++|.++..   ....+.+.+|+++++.+.|+++     +++++++...+..
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~   75 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENI-----VNLKEAFRRKGRL   75 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCe-----eehhheEEECCEE
Confidence            4699999999999999999999999999999988643   2345678899999999998887     9999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC-
Q 024661          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF-  247 (264)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~-  247 (264)
                      +++|||+++++.+.+.... ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++...... 
T Consensus        76 ~iv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~  154 (288)
T cd07833          76 YLVFEYVERTLLELLEASP-GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARP  154 (288)
T ss_pred             EEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence            9999999555555444332 36899999999999999999999999999999999999999999999999998764332 


Q ss_pred             ------cccceeeeeceeEee
Q 024661          248 ------SFQTFLSMASRVYIC  262 (264)
Q Consensus       248 ------~~~~~~y~ape~~~~  262 (264)
                            ..++..|+|||++..
T Consensus       155 ~~~~~~~~~~~~~~~PE~~~~  175 (288)
T cd07833         155 ASPLTDYVATRWYRAPELLVG  175 (288)
T ss_pred             cccccCcccccCCcCCchhcC
Confidence                  235678999998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.96  E-value=2.4e-28  Score=199.42  Aligned_cols=158  Identities=16%  Similarity=0.253  Sum_probs=134.5

Q ss_pred             eecccCccEEEEEEEeCCCC----------cEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           98 SKMGEGTFGQVVECFDNEKK----------ELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~----------~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      +.||+|+||.||+|.+..++          ..+++|.+.........+.+|+.+++.+.|+++     +.+++++.. ..
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~-~~   74 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHL-----VKLYGVCVR-DE   74 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcch-----hheeeEEec-CC
Confidence            46899999999999998766          357888776544436788899999999999888     899998877 77


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC-------cEEeccCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE-------YVKVPDYK  239 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~-------~v~l~Dfg  239 (264)
                      .++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+|||++.++       .++|+|||
T Consensus        75 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg  153 (259)
T cd05037          75 NIMVEEYVKFGPLDVFLHREK-NNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPG  153 (259)
T ss_pred             cEEEEEcCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCC
Confidence            89999999 899999998754 2688999999999999999999999999999999999999888       89999999


Q ss_pred             CCCcCCC--CcccceeeeeceeEee
Q 024661          240 VPSPRHA--FSFQTFLSMASRVYIC  262 (264)
Q Consensus       240 ~a~~~~~--~~~~~~~y~ape~~~~  262 (264)
                      ++.....  ...++..|+|||.+.+
T Consensus       154 ~a~~~~~~~~~~~~~~y~aPE~~~~  178 (259)
T cd05037         154 IPITVLSREERVERIPWIAPECIRN  178 (259)
T ss_pred             cccccccccccccCCCccChhhhcC
Confidence            9976443  3345667999998754

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.96  E-value=4e-28  Score=205.66  Aligned_cols=168  Identities=18%  Similarity=0.287  Sum_probs=139.2

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCC-------CcEEEEEEEech--hhhHHHHHHHHHHHHHH-hccCCCCcceEEEc
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEK-------KELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIR  159 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~  159 (264)
                      ...+|++.+.||+|+||.||+|.+...       +..+++|.++..  ....+.+.+|+.+++++ .|+|+     ++++
T Consensus        10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----v~~~   84 (334)
T cd05100          10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNI-----INLL   84 (334)
T ss_pred             CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCe-----eeee
Confidence            345799999999999999999986432       236899987743  33456788999999999 68887     9999


Q ss_pred             eeeeeCCEEEEEEecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 024661          160 NWFDYRNHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPEN  224 (264)
Q Consensus       160 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~N  224 (264)
                      +++...+.++++|||+ +++|.+++....              ...++...+..++.|++.||.|||++|++||||||+|
T Consensus        85 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~N  164 (334)
T cd05100          85 GACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARN  164 (334)
T ss_pred             EEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccce
Confidence            9999999999999999 889999997532              1247788899999999999999999999999999999


Q ss_pred             EEeecCCcEEeccCCCCCcCCCC--------cccceeeeeceeEee
Q 024661          225 ILLVSAEYVKVPDYKVPSPRHAF--------SFQTFLSMASRVYIC  262 (264)
Q Consensus       225 ili~~~~~v~l~Dfg~a~~~~~~--------~~~~~~y~ape~~~~  262 (264)
                      ||++.++.++|+|||+++.....        ..++..|||||++.+
T Consensus       165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  210 (334)
T cd05100         165 VLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFD  210 (334)
T ss_pred             EEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhcc
Confidence            99999999999999998754321        123457999998753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.96  E-value=5.1e-28  Score=198.01  Aligned_cols=163  Identities=27%  Similarity=0.369  Sum_probs=144.3

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh---hHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      +|.+.+.||+|+||.||+|.+..+++.+++|.++....   ..+.+.+|+++++.++|+++     +++++.+.+.+.++
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i-----~~~~~~~~~~~~~~   75 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNL-----VKYYGVEVHREKVY   75 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCCh-----hheeeeEecCCEEE
Confidence            58999999999999999999998999999999875433   56788999999999999888     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC--
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA--  246 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~--  246 (264)
                      +|+||+ +++|.+++....  .+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.....  
T Consensus        76 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~  153 (264)
T cd06626          76 IFMEYCSGGTLEELLEHGR--ILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT  153 (264)
T ss_pred             EEEecCCCCcHHHHHhhcC--CCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence            999999 899999998754  588999999999999999999999999999999999999999999999999876432  


Q ss_pred             --------CcccceeeeeceeEee
Q 024661          247 --------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 --------~~~~~~~y~ape~~~~  262 (264)
                              ...++..|++||++.+
T Consensus       154 ~~~~~~~~~~~~~~~~~~PE~~~~  177 (264)
T cd06626         154 TTMGEEVQSLAGTPAYMAPEVITG  177 (264)
T ss_pred             CcccccccCCcCCcCccChhhccC
Confidence                    1235678999998653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.96  E-value=3.2e-28  Score=204.04  Aligned_cols=166  Identities=28%  Similarity=0.391  Sum_probs=141.1

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC--
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR--  165 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~--  165 (264)
                      .++|++.+.||.|+||.||+|.+..+|+.||+|.++...   .......+|+.+++.++|+++     +++++++...  
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~   80 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNI-----VELKEVVVGKHL   80 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCC-----cceEEEEecCCC
Confidence            357999999999999999999999999999999987432   222345679999999999988     8999888764  


Q ss_pred             CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          166 NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       166 ~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      +.+++||||++++|.+++.... ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++....
T Consensus        81 ~~~~lv~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~  159 (309)
T cd07845          81 DSIFLVMEYCEQDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYG  159 (309)
T ss_pred             CeEEEEEecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecC
Confidence            5789999999889999988643 468999999999999999999999999999999999999999999999999987643


Q ss_pred             CC------cccceeeeeceeEee
Q 024661          246 AF------SFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~~------~~~~~~y~ape~~~~  262 (264)
                      ..      ...+..|+|||.+.+
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~  182 (309)
T cd07845         160 LPAKPMTPKVVTLWYRAPELLLG  182 (309)
T ss_pred             CccCCCCcccccccccChhhhcC
Confidence            21      124667999998753

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.96  E-value=5.8e-28  Score=198.19  Aligned_cols=163  Identities=28%  Similarity=0.374  Sum_probs=140.2

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech------hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee--
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI------NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--  164 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~--  164 (264)
                      .|++.+.||+|+||.||+|.+..++..+++|.+...      ......+.+|+.+++.++|+|+     +.+++++.+  
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~   77 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERI-----VQYYGCLRDRA   77 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCe-----eeEEEEEEcCC
Confidence            588999999999999999999999999999988632      1234567889999999999888     999988865  


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      ...++++||++ +++|.+++....  .+++..++.++.|++.||+|||+++|+|+||+|+||+++.++.++|+|||++..
T Consensus        78 ~~~~~l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~  155 (266)
T cd06651          78 EKTLTIFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKR  155 (266)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence            46789999999 889999998765  689999999999999999999999999999999999999999999999999864


Q ss_pred             CCC---------CcccceeeeeceeEee
Q 024661          244 RHA---------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       244 ~~~---------~~~~~~~y~ape~~~~  262 (264)
                      ...         ...++..|+|||.+.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~  183 (266)
T cd06651         156 LQTICMSGTGIRSVTGTPYWMSPEVISG  183 (266)
T ss_pred             cccccccCCccccCCccccccCHHHhCC
Confidence            321         1236778999997643

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.96  E-value=5.5e-28  Score=200.06  Aligned_cols=163  Identities=27%  Similarity=0.465  Sum_probs=142.7

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC--CEE
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR--NHI  168 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~--~~~  168 (264)
                      |++.+.||.|++|.||+|.+..+++.+++|.+...   ......+.+|+++++.+.|+++     +.+++++.+.  +..
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~~   75 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNI-----VRLKEIVTSKGKGSI   75 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCe-----eeheeeEecCCCCcE
Confidence            67889999999999999999999999999999754   2344567889999999998887     9999999888  899


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC-
Q 024661          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF-  247 (264)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~-  247 (264)
                      ++||||+.++|.+++.... ..+++..++.++.||+.||+|||+.|++|+||+|+||++++++.++|+|||++...... 
T Consensus        76 ~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~  154 (287)
T cd07840          76 YMVFEYMDHDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRN  154 (287)
T ss_pred             EEEeccccccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence            9999999779999987653 36899999999999999999999999999999999999999999999999998764432 


Q ss_pred             ------cccceeeeeceeEee
Q 024661          248 ------SFQTFLSMASRVYIC  262 (264)
Q Consensus       248 ------~~~~~~y~ape~~~~  262 (264)
                            ..++..|++||.+.+
T Consensus       155 ~~~~~~~~~~~~y~~PE~~~~  175 (287)
T cd07840         155 SADYTNRVITLWYRPPELLLG  175 (287)
T ss_pred             cccccccccccccCCceeeEc
Confidence                  245677999998754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.96  E-value=4e-28  Score=201.95  Aligned_cols=165  Identities=30%  Similarity=0.438  Sum_probs=138.5

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhc-cCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLAR-HDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~-~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++.+.||+|+||.||+|.+..+++.|++|.+....   .....+.+|+.+++.+.| +++     +++++++...+.
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i-----~~~~~~~~~~~~   75 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYI-----VRLLDVEHVEEK   75 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCc-----cceeeeEeecCC
Confidence            46999999999999999999999999999999876432   233567889999999965 666     889988877655


Q ss_pred             -----EEEEEecCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec-CCcEEeccC
Q 024661          168 -----ICIVFEKLGPSLYDFLRKNS---YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS-AEYVKVPDY  238 (264)
Q Consensus       168 -----~~lv~e~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~-~~~v~l~Df  238 (264)
                           .|++|||+.++|.+++....   ...+++..++.++.||+.||.|||++||+|+||+|+||+++. ++.++|+||
T Consensus        76 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~df  155 (295)
T cd07837          76 NGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADL  155 (295)
T ss_pred             CCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeec
Confidence                 89999999779999887532   235899999999999999999999999999999999999998 889999999


Q ss_pred             CCCCcCCC------CcccceeeeeceeEe
Q 024661          239 KVPSPRHA------FSFQTFLSMASRVYI  261 (264)
Q Consensus       239 g~a~~~~~------~~~~~~~y~ape~~~  261 (264)
                      |++.....      ...++..|+|||++.
T Consensus       156 g~~~~~~~~~~~~~~~~~~~~~~aPE~~~  184 (295)
T cd07837         156 GLGRAFSIPVKSYTHEIVTLWYRAPEVLL  184 (295)
T ss_pred             ccceecCCCccccCCcccccCCCChHHhh
Confidence            99875322      123567799999764

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.96  E-value=2.3e-28  Score=207.40  Aligned_cols=165  Identities=24%  Similarity=0.402  Sum_probs=141.9

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC-
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR-  165 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~-  165 (264)
                      +..+|.+.+.||+|+||.||+|.+..+++.|++|.+...   ......+.+|+.+++.++|+|+     +++++++... 
T Consensus         3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----~~~~~~~~~~~   77 (337)
T cd07858           3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENV-----IAIKDIMPPPH   77 (337)
T ss_pred             cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCc-----cchHHheeccc
Confidence            456899999999999999999999999999999988642   2334566789999999999988     8888877543 


Q ss_pred             ----CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCC
Q 024661          166 ----NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVP  241 (264)
Q Consensus       166 ----~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a  241 (264)
                          ...|++|||++++|.+++....  .+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||++
T Consensus        78 ~~~~~~~~lv~e~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~  155 (337)
T cd07858          78 REAFNDVYIVYELMDTDLHQIIRSSQ--TLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLA  155 (337)
T ss_pred             ccccCcEEEEEeCCCCCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccc
Confidence                3589999999889999988654  7999999999999999999999999999999999999999999999999999


Q ss_pred             CcCCCC------cccceeeeeceeEe
Q 024661          242 SPRHAF------SFQTFLSMASRVYI  261 (264)
Q Consensus       242 ~~~~~~------~~~~~~y~ape~~~  261 (264)
                      ......      ..++..|+|||.+.
T Consensus       156 ~~~~~~~~~~~~~~~~~~y~aPE~~~  181 (337)
T cd07858         156 RTTSEKGDFMTEYVVTRWYRAPELLL  181 (337)
T ss_pred             cccCCCcccccccccccCccChHHHh
Confidence            764332      24677899999764

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.96  E-value=4.7e-28  Score=200.13  Aligned_cols=164  Identities=21%  Similarity=0.273  Sum_probs=136.8

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCc----EEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKE----LVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      .++|++.+.||.|+||.||+|.+..+++    .||+|+++..  ......+.+|+.+++.+.|+++     +.+++++..
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~   80 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYV-----CRLLGICLT   80 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCC-----ceEEEEEcC
Confidence            3679999999999999999999877765    4799988632  3345677889999999988887     888888765


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                       ...+++||++ +|+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus        81 -~~~~l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~  158 (279)
T cd05109          81 -STVQLVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARL  158 (279)
T ss_pred             -CCcEEEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceee
Confidence             4578999999 899999997653 3689999999999999999999999999999999999999999999999999875


Q ss_pred             CCCC--------cccceeeeeceeEe
Q 024661          244 RHAF--------SFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~~--------~~~~~~y~ape~~~  261 (264)
                      ....        ..++..||+||.+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~~PE~~~  184 (279)
T cd05109         159 LDIDETEYHADGGKVPIKWMALESIL  184 (279)
T ss_pred             cccccceeecCCCccchhhCCHHHhc
Confidence            4311        12345799999764

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.96  E-value=4.4e-28  Score=197.63  Aligned_cols=162  Identities=28%  Similarity=0.388  Sum_probs=142.6

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh------hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      +|+..+.||+|++|.||+|.+..+++.+++|.+....      ...+.+.+|+.+++.++|+++     +++++++.+..
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~~~   75 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNI-----VQYLGTEREED   75 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCc-----hheeeeEecCC
Confidence            4788899999999999999998889999999886432      245678889999999999888     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      .+|++|||+ +++|.+++.+..  .+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.+||+|||++....
T Consensus        76 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~  153 (258)
T cd06632          76 NLYIFLELVPGGSLAKLLKKYG--SFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVV  153 (258)
T ss_pred             eEEEEEEecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceecc
Confidence            999999999 889999998764  68999999999999999999999999999999999999999999999999987643


Q ss_pred             C-----CcccceeeeeceeEe
Q 024661          246 A-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ~-----~~~~~~~y~ape~~~  261 (264)
                      .     ...++..|++||.+.
T Consensus       154 ~~~~~~~~~~~~~y~~pe~~~  174 (258)
T cd06632         154 EFSFAKSFKGSPYWMAPEVIA  174 (258)
T ss_pred             ccccccccCCCcceeCHHHhc
Confidence            2     234677899999753

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.96  E-value=2.5e-28  Score=203.91  Aligned_cols=169  Identities=27%  Similarity=0.474  Sum_probs=143.2

Q ss_pred             CCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeee
Q 024661           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~  163 (264)
                      ++...++|++.+.||.|+||.||+|.+..+++.+++|.++..   ......+.+|+++++.++|+|+     +++++++.
T Consensus         2 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i-----~~~~~~~~   76 (302)
T cd07864           2 GKRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNI-----VNLKEIVT   76 (302)
T ss_pred             chhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCe-----eeeeheec
Confidence            345567899999999999999999999999999999998743   2234566789999999999888     88888876


Q ss_pred             eCC----------EEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcE
Q 024661          164 YRN----------HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV  233 (264)
Q Consensus       164 ~~~----------~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v  233 (264)
                      +..          .+|+||||++++|.+++.... ..+++..++.++.||+.||.|||+.||+|+||+|+||++++++.+
T Consensus        77 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~  155 (302)
T cd07864          77 DKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGL-VHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQI  155 (302)
T ss_pred             CcchhhhccccCCcEEEEEcccCccHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcE
Confidence            644          899999999778888887653 468999999999999999999999999999999999999999999


Q ss_pred             EeccCCCCCcCCCC-------cccceeeeeceeEe
Q 024661          234 KVPDYKVPSPRHAF-------SFQTFLSMASRVYI  261 (264)
Q Consensus       234 ~l~Dfg~a~~~~~~-------~~~~~~y~ape~~~  261 (264)
                      ||+|||++......       ...+..|++||.+.
T Consensus       156 kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~  190 (302)
T cd07864         156 KLADFGLARLYNSEESRPYTNKVITLWYRPPELLL  190 (302)
T ss_pred             EeCcccccccccCCcccccccceeccCccChHHhc
Confidence            99999998764322       13466799999764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.96  E-value=4.8e-28  Score=197.28  Aligned_cols=163  Identities=26%  Similarity=0.378  Sum_probs=144.8

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      ++|++.+.||+|+||.||+|.+..++..+++|.+..... .+.+.+|+++++.++|+++     +.+++.+.+...+|++
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l~~~~i-----~~~~~~~~~~~~~~l~   76 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQCDSPYI-----VKYYGSYFKNTDLWIV   76 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhCCCCcE-----eeeeeeeecCCcEEEE
Confidence            569999999999999999999998899999999876544 6788999999999988887     9999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC---
Q 024661          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF---  247 (264)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~---  247 (264)
                      +|++ +++|.+++.... ..+++..++.++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++......   
T Consensus        77 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~  155 (256)
T cd06612          77 MEYCGAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAK  155 (256)
T ss_pred             EecCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCccc
Confidence            9999 889999987543 46899999999999999999999999999999999999999999999999998764332   


Q ss_pred             ---cccceeeeeceeEe
Q 024661          248 ---SFQTFLSMASRVYI  261 (264)
Q Consensus       248 ---~~~~~~y~ape~~~  261 (264)
                         ..++..|++||.+.
T Consensus       156 ~~~~~~~~~y~~PE~~~  172 (256)
T cd06612         156 RNTVIGTPFWMAPEVIQ  172 (256)
T ss_pred             cccccCCccccCHHHHh
Confidence               23677899999754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.96  E-value=7.3e-28  Score=196.20  Aligned_cols=164  Identities=26%  Similarity=0.338  Sum_probs=143.2

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      +|++.+.||+|+||.||+|.+..+++.+++|.+...   ......+.+|+++++.++|+++     +++++.+..++..+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~~~   75 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNI-----IEYYENFLEDKALM   75 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCch-----hheeeeEecCCEEE
Confidence            589999999999999999999999999999998743   2345678889999999999888     89999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC-CcEEeccCCCCCcCCCC
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA-EYVKVPDYKVPSPRHAF  247 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~-~~v~l~Dfg~a~~~~~~  247 (264)
                      +||||+ +++|.+++.......+++..+..++.|++.+|.|||++|++|+||+|+||+++.+ +.++|+|||++......
T Consensus        76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~  155 (256)
T cd08220          76 IVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK  155 (256)
T ss_pred             EEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence            999999 8899999987654568999999999999999999999999999999999999865 46899999999764432


Q ss_pred             -----cccceeeeeceeEe
Q 024661          248 -----SFQTFLSMASRVYI  261 (264)
Q Consensus       248 -----~~~~~~y~ape~~~  261 (264)
                           ..++..|+|||.+.
T Consensus       156 ~~~~~~~~~~~y~aPE~~~  174 (256)
T cd08220         156 SKAYTVVGTPCYISPELCE  174 (256)
T ss_pred             ccccccccCCcccCchhcc
Confidence                 34677899999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=3.4e-28  Score=200.38  Aligned_cols=163  Identities=26%  Similarity=0.354  Sum_probs=144.2

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      ++|++.+.||.|++|.||+|.+..+++.+++|.+....  .....+.+|+++++.++|+|+     +.+.+++.+...+|
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~   75 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYI-----TKYYGSFLKGSKLW   75 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCe-----eeeeEEEEECCeEE
Confidence            46889999999999999999999999999999987432  334567889999999998887     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC--
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA--  246 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~--  246 (264)
                      +|+||+ +++|.+++...   .+++..++.++.|++.||.|||+++++|+||+|+||++++++.++|+|||+++....  
T Consensus        76 ~v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~  152 (274)
T cd06609          76 IIMEYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM  152 (274)
T ss_pred             EEEEeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence            999999 88999998865   689999999999999999999999999999999999999999999999999876443  


Q ss_pred             ----CcccceeeeeceeEee
Q 024661          247 ----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ----~~~~~~~y~ape~~~~  262 (264)
                          ...++..|++||.+.+
T Consensus       153 ~~~~~~~~~~~y~~PE~~~~  172 (274)
T cd06609         153 SKRNTFVGTPFWMAPEVIKQ  172 (274)
T ss_pred             cccccccCCccccChhhhcc
Confidence                2346778999998764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.96  E-value=5.5e-28  Score=198.44  Aligned_cols=166  Identities=19%  Similarity=0.276  Sum_probs=140.5

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCc---EEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKE---LVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .++|+..+.||+|+||.||+|.+..++.   .+++|.++..  ....+.+..|+++++.+.|+++     +++.+++.+.
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~   78 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNI-----IRLEGVVTKF   78 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCe-----eEEEEEEccC
Confidence            3568999999999999999999876554   6899988643  3345678889999999998887     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      +..|+||||+ +++|.+++.... ..+++..+..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||++...
T Consensus        79 ~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~  157 (268)
T cd05063          79 KPAMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVL  157 (268)
T ss_pred             CCcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceec
Confidence            9999999999 889999997643 36899999999999999999999999999999999999999999999999998754


Q ss_pred             CCCc---------ccceeeeeceeEee
Q 024661          245 HAFS---------FQTFLSMASRVYIC  262 (264)
Q Consensus       245 ~~~~---------~~~~~y~ape~~~~  262 (264)
                      ....         ..+..|++||++.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~  184 (268)
T cd05063         158 EDDPEGTYTTSGGKIPIRWTAPEAIAY  184 (268)
T ss_pred             ccccccceeccCCCcCceecCHHHhhc
Confidence            3221         12346999997643

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.96  E-value=4.7e-28  Score=202.78  Aligned_cols=164  Identities=24%  Similarity=0.438  Sum_probs=138.5

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC---
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR---  165 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~---  165 (264)
                      ++|++.++||+|+||.||+|.+..+++.+|+|.+....   .......+|+.+++.++|+++     +++++++...   
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~~   86 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENV-----VNLIEICRTKATP   86 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCc-----cceEEEEeccccc
Confidence            56999999999999999999999999999999886422   223455679999999999988     8888877654   


Q ss_pred             -----CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCC
Q 024661          166 -----NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV  240 (264)
Q Consensus       166 -----~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~  240 (264)
                           ...|+||||++++|.+++.... ..+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||+
T Consensus        87 ~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~  165 (310)
T cd07865          87 YNRYKGSFYLVFEFCEHDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGL  165 (310)
T ss_pred             ccCCCceEEEEEcCCCcCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCC
Confidence                 3569999999889998887643 3689999999999999999999999999999999999999999999999999


Q ss_pred             CCcCCC----------CcccceeeeeceeEe
Q 024661          241 PSPRHA----------FSFQTFLSMASRVYI  261 (264)
Q Consensus       241 a~~~~~----------~~~~~~~y~ape~~~  261 (264)
                      +.....          ...++..|+|||.+.
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  196 (310)
T cd07865         166 ARAFSLSKNSKPNRYTNRVVTLWYRPPELLL  196 (310)
T ss_pred             cccccCCcccCCCCccCcccCccccCcHHhc
Confidence            865322          123566799999764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.96  E-value=3.3e-28  Score=199.04  Aligned_cols=162  Identities=27%  Similarity=0.442  Sum_probs=136.2

Q ss_pred             EEEeecccCccEEEEEEEeC----CCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           95 RILSKMGEGTFGQVVECFDN----EKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        95 ~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      .+.+.||.|.||.||+|.+.    ..+..|+||.++..  ....+.+.+|++.++.++|+|+     +++++++...+..
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-----~~~~g~~~~~~~~   76 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNI-----VKLYGFCIENEPL   76 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTB-----E-EEEEEESSSSE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccc-----ccccccccccccc
Confidence            46789999999999999988    34677999999642  3346888999999999999988     9999999988889


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-  246 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-  246 (264)
                      ++||||+ +|+|.+++.......+++..+..|+.||+.||.|||+++++|+||+++||+++.++.+||+|||++..... 
T Consensus        77 ~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~  156 (259)
T PF07714_consen   77 FLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK  156 (259)
T ss_dssp             EEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999 89999999987445799999999999999999999999999999999999999999999999999976521 


Q ss_pred             -------CcccceeeeeceeEe
Q 024661          247 -------FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 -------~~~~~~~y~ape~~~  261 (264)
                             .......|+|||.+.
T Consensus       157 ~~~~~~~~~~~~~~~~aPE~~~  178 (259)
T PF07714_consen  157 SKYKNDSSQQLPLRYLAPEVLK  178 (259)
T ss_dssp             SSEEESTTSESGGGGS-HHHHH
T ss_pred             cccccccccccccccccccccc
Confidence                   223556799999753

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.96  E-value=2.2e-28  Score=202.60  Aligned_cols=163  Identities=29%  Similarity=0.439  Sum_probs=140.3

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ++|++.+.||+|+||.||+|.+..+++.+|+|.+....   ...+.+.+|+++++.+.|+++     +++++++.+.+..
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~   75 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENL-----VNLIEVFRRKKRL   75 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcch-----hhHHHhcccCCeE
Confidence            36999999999999999999999899999999875422   234567889999999999888     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-  246 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-  246 (264)
                      |+||||+ ++.|.++.....  .+++..+..++.||+.||.|||+.|++|+||+|+||++++++.++|+|||++..... 
T Consensus        76 ~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~  153 (286)
T cd07846          76 YLVFEFVDHTVLDDLEKYPN--GLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP  153 (286)
T ss_pred             EEEEecCCccHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence            9999999 667776665443  589999999999999999999999999999999999999999999999999875322 


Q ss_pred             -----CcccceeeeeceeEe
Q 024661          247 -----FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 -----~~~~~~~y~ape~~~  261 (264)
                           ...++..|+|||++.
T Consensus       154 ~~~~~~~~~~~~y~aPE~~~  173 (286)
T cd07846         154 GEVYTDYVATRWYRAPELLV  173 (286)
T ss_pred             ccccCcccceeeccCcHHhc
Confidence                 123677899999764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.96  E-value=5.4e-28  Score=198.17  Aligned_cols=162  Identities=25%  Similarity=0.336  Sum_probs=139.8

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech-------hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-------NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      +|++.+.||.|+||.||+|.. .+++.+|+|.+...       ......+.+|+++++.++|+|+     +++.+++.+.
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~   74 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNI-----VQYLGTCLDD   74 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCE-----eeEeeEeecC
Confidence            488899999999999999986 47888999988632       1233567889999999999887     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      +.+|++|||+ +++|.+++.+..  .+++..+..++.|++.||+|||+.+++|+||+|+||++++++.++|+|||++...
T Consensus        75 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  152 (265)
T cd06631          75 NTISIFMEFVPGGSISSILNRFG--PLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRL  152 (265)
T ss_pred             CeEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence            9999999999 899999998754  6889999999999999999999999999999999999999999999999988643


Q ss_pred             C------------CCcccceeeeeceeEee
Q 024661          245 H------------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       245 ~------------~~~~~~~~y~ape~~~~  262 (264)
                      .            ....++..|++||.+.+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~  182 (265)
T cd06631         153 AWVGLHGTHSNMLKSMHGTPYWMAPEVINE  182 (265)
T ss_pred             hhccccccccccccccCCCccccChhhhcC
Confidence            1            12246778999998754

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=2.2e-28  Score=207.20  Aligned_cols=168  Identities=24%  Similarity=0.334  Sum_probs=141.7

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEe---chhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      -+..|+++++||+|+.+.||++.... ...+|+|.+.   .+.+....+..|+..|..|+.+    ..++++++|-..++
T Consensus       359 kg~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~----~~IIqL~DYEv~d~  433 (677)
T KOG0596|consen  359 KGREYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGH----DKIIQLYDYEVTDG  433 (677)
T ss_pred             CcchhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCC----ceEEEEeeeeccCc
Confidence            34559999999999999999998543 3456666544   3456778899999999999876    45699999999999


Q ss_pred             EEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC-
Q 024661          167 HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH-  245 (264)
Q Consensus       167 ~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~-  245 (264)
                      ++|||||+-..+|..+|++... ....-.++.|..||+.|+.++|.+||||.||||.|+|+- +|.+||+|||+|.... 
T Consensus       434 ~lYmvmE~Gd~DL~kiL~k~~~-~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~  511 (677)
T KOG0596|consen  434 YLYMVMECGDIDLNKILKKKKS-IDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQP  511 (677)
T ss_pred             eEEEEeecccccHHHHHHhccC-CCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCc
Confidence            9999999999999999998762 233348899999999999999999999999999999996 6899999999997643 


Q ss_pred             -------CCcccceeeeeceeEeecC
Q 024661          246 -------AFSFQTFLSMASRVYICIN  264 (264)
Q Consensus       246 -------~~~~~~~~y~ape~~~~~~  264 (264)
                             ...+||..||+||.+.|++
T Consensus       512 DTTsI~kdsQvGT~NYMsPEAl~~~~  537 (677)
T KOG0596|consen  512 DTTSIVKDSQVGTVNYMSPEALTDMS  537 (677)
T ss_pred             cccceeeccccCcccccCHHHHhhcc
Confidence                   4557999999999998874

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.96  E-value=4.5e-28  Score=204.38  Aligned_cols=155  Identities=19%  Similarity=0.140  Sum_probs=122.4

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCC-CCcEEEEEEEech------hhhHHHHHHHHHHHHHHhccCCCCcceE-EEc
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSI------NKYREAAMIEIDVLQRLARHDIGGTRCV-QIR  159 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~~-~~~  159 (264)
                      ..+.++|.+.+.||+|+||+||+|.+.. +++.+|||++...      ......+.+|+++++.+.|+++     + .++
T Consensus        14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~i-----v~~l~   88 (365)
T PRK09188         14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGV-----VPQLL   88 (365)
T ss_pred             ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCC-----CcEEE
Confidence            3556789999999999999999999876 6777899986522      2235678999999999999987     4 343


Q ss_pred             eeeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC-CCCCEEeecCCcEEecc
Q 024661          160 NWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL-KPENILLVSAEYVKVPD  237 (264)
Q Consensus       160 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~di-kp~Nili~~~~~v~l~D  237 (264)
                      +.    +..|+||||+ |++|.. +..     ..   ...++.|++.+|.|||++||+|||| ||+|||++.+++++|+|
T Consensus        89 ~~----~~~~LVmE~~~G~~L~~-~~~-----~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiD  155 (365)
T PRK09188         89 AT----GKDGLVRGWTEGVPLHL-ARP-----HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVID  155 (365)
T ss_pred             Ec----CCcEEEEEccCCCCHHH-hCc-----cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEE
Confidence            32    4579999999 888862 211     11   1467899999999999999999999 99999999999999999


Q ss_pred             CCCCCcCCCCc--------------ccceeeeeceeE
Q 024661          238 YKVPSPRHAFS--------------FQTFLSMASRVY  260 (264)
Q Consensus       238 fg~a~~~~~~~--------------~~~~~y~ape~~  260 (264)
                      ||+|+......              .+++.|+|||++
T Consensus       156 FGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~  192 (365)
T PRK09188        156 FQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDAL  192 (365)
T ss_pred             CccceecccCcchhhhhhhhhhhhhhccCccCCcccC
Confidence            99998543322              345668999975

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.96  E-value=4.8e-28  Score=197.55  Aligned_cols=159  Identities=22%  Similarity=0.336  Sum_probs=139.5

Q ss_pred             eecccCccEEEEEEEeCCC---CcEEEEEEEechhh--hHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           98 SKMGEGTFGQVVECFDNEK---KELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      +.||+|+||.||+|.+...   +..+++|++.....  ..+.+.+|++.++.+.|+++     +++++++.+...++++|
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~~~lv~   75 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNV-----VRLLGVCTEEEPLYLVL   75 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCCh-----heeeeeecCCCceEEEE
Confidence            4699999999999999866   88899999875433  35788899999999998887     99999999999999999


Q ss_pred             ecC-CCCHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          173 EKL-GPSLYDFLRKNS-------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~-------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      ||+ +++|.+++....       ...+++..++.++.|++.||+|||++|++|+||+|+||+++.++.++|+|||.+...
T Consensus        76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~  155 (262)
T cd00192          76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDV  155 (262)
T ss_pred             EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEccccccccc
Confidence            999 999999998751       247899999999999999999999999999999999999999999999999999865


Q ss_pred             CCC--------cccceeeeeceeEe
Q 024661          245 HAF--------SFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~~~--------~~~~~~y~ape~~~  261 (264)
                      ...        ..++..|+|||.+.
T Consensus       156 ~~~~~~~~~~~~~~~~~y~aPE~~~  180 (262)
T cd00192         156 YDDDYYRKKTGGKLPIRWMAPESLK  180 (262)
T ss_pred             ccccccccccCCCcCccccCHHHhc
Confidence            432        34677899999764

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.96  E-value=8.2e-28  Score=199.93  Aligned_cols=165  Identities=21%  Similarity=0.316  Sum_probs=139.7

Q ss_pred             CCeEEEeecccCccEEEEEEEeCC-----CCcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .+|.+.+.||+|+||.||+|.+..     ++..+++|.+.... ...+.+.+|+++++.+.|+++     +++++++...
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~   79 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI-----VKFYGVCGDG   79 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCc-----ceEEEEEccC
Confidence            459999999999999999998543     45568889876433 334678899999999999888     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA  230 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~  230 (264)
                      ...++||||+ +++|.+++....              ...+++..++.++.||+.||+|||++||+|+||||+|||++.+
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~  159 (291)
T cd05094          80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN  159 (291)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC
Confidence            9999999999 999999997542              1247899999999999999999999999999999999999999


Q ss_pred             CcEEeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          231 EYVKVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       231 ~~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      +.++|+|||++.....        ...++..|||||.+.
T Consensus       160 ~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~  198 (291)
T cd05094         160 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM  198 (291)
T ss_pred             CcEEECCCCcccccCCCceeecCCCCCcceeecChHHhc
Confidence            9999999999865322        233567899999764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.96  E-value=6.7e-28  Score=201.05  Aligned_cols=166  Identities=21%  Similarity=0.310  Sum_probs=137.8

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCc--EEEEEEEec--hhhhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeCC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKE--LVAIKIVRS--INKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~--~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      ++|++.+.||.|+||.||+|.+..++.  .+++|.++.  .....+.+.+|+.++.++ .|+++     +++++++...+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~i-----v~~~~~~~~~~   76 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNI-----INLLGACENRG   76 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCch-----hheEEEEccCC
Confidence            469999999999999999999877664  468887763  233456788899999999 57777     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~  231 (264)
                      .+|++|||+ +++|.+++....              ...+++..++.++.|++.||+|||++||+|+||||+|||++.++
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~  156 (297)
T cd05089          77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENL  156 (297)
T ss_pred             cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCC
Confidence            999999999 899999997532              12478899999999999999999999999999999999999999


Q ss_pred             cEEeccCCCCCcCCC-----CcccceeeeeceeEee
Q 024661          232 YVKVPDYKVPSPRHA-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       232 ~v~l~Dfg~a~~~~~-----~~~~~~~y~ape~~~~  262 (264)
                      .+||+|||++.....     ....+..|++||.+.+
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~  192 (297)
T cd05089         157 ASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNY  192 (297)
T ss_pred             eEEECCcCCCccccceeccCCCCcCccccCchhhcc
Confidence            999999999864321     1122456999997653

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.96  E-value=5.4e-28  Score=200.01  Aligned_cols=163  Identities=28%  Similarity=0.460  Sum_probs=142.0

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      |++.+.||.|++|.||+|.+..+|..|++|++....   .....+.+|+++++.++|+++     +++++++.+.+..|+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i-----v~~~~~~~~~~~~~i   75 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNI-----VRLLDVVHSENKLYL   75 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCc-----cCHhheeccCCeEEE
Confidence            677889999999999999999999999999887432   233567889999999999888     999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC-----
Q 024661          171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH-----  245 (264)
Q Consensus       171 v~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~-----  245 (264)
                      +|||++++|.+++.......+++..++.++.|++.||+|||+++++|+||+|+||+++.++.++|+|||++....     
T Consensus        76 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~  155 (283)
T cd07835          76 VFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT  155 (283)
T ss_pred             EEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc
Confidence            999998899999887654468999999999999999999999999999999999999999999999999986532     


Q ss_pred             -CCcccceeeeeceeEe
Q 024661          246 -AFSFQTFLSMASRVYI  261 (264)
Q Consensus       246 -~~~~~~~~y~ape~~~  261 (264)
                       ....++..|+|||++.
T Consensus       156 ~~~~~~~~~~~aPE~~~  172 (283)
T cd07835         156 YTHEVVTLWYRAPEILL  172 (283)
T ss_pred             cCccccccCCCCCceee
Confidence             1223577899999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.96  E-value=2.9e-28  Score=206.60  Aligned_cols=167  Identities=21%  Similarity=0.379  Sum_probs=142.2

Q ss_pred             ccCCCeEE-EeecccCccEEEEEEEeCCCCcEEEEEEEechhhh---------------HHHHHHHHHHHHHHhccCCCC
Q 024661           89 NLTPRYRI-LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY---------------REAAMIEIDVLQRLARHDIGG  152 (264)
Q Consensus        89 ~~~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---------------~~~~~~e~~~l~~l~~~~~~~  152 (264)
                      .+.++|.. .+.||.|+||.||+|.+..+++.||+|.+......               ...+.+|+++++.+.|+++  
T Consensus         5 ~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i--   82 (335)
T PTZ00024          5 SISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENI--   82 (335)
T ss_pred             ccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcce--
Confidence            45577875 56799999999999999999999999988643221               1246789999999999887  


Q ss_pred             cceEEEceeeeeCCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCc
Q 024661          153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY  232 (264)
Q Consensus       153 ~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~  232 (264)
                         +.+++++..++..|+|||++.++|.+++....  .+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.
T Consensus        83 ---v~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~  157 (335)
T PTZ00024         83 ---MGLVDVYVEGDFINLVMDIMASDLKKVVDRKI--RLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGI  157 (335)
T ss_pred             ---eeeeEEEecCCcEEEEEeccccCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCC
Confidence               99999999999999999999889999998654  6899999999999999999999999999999999999999999


Q ss_pred             EEeccCCCCCcCC--------------------CCcccceeeeeceeEee
Q 024661          233 VKVPDYKVPSPRH--------------------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       233 v~l~Dfg~a~~~~--------------------~~~~~~~~y~ape~~~~  262 (264)
                      ++|+|||++....                    ....++..|++||.+.+
T Consensus       158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  207 (335)
T PTZ00024        158 CKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMG  207 (335)
T ss_pred             EEECCccceeecccccccccccccccccccccccccccccCCCCChhccc
Confidence            9999999886543                    01134667999998753

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.96  E-value=7.5e-28  Score=202.32  Aligned_cols=165  Identities=20%  Similarity=0.331  Sum_probs=137.4

Q ss_pred             CCeEEEeecccCccEEEEEEEeCC-------CCcEEEEEEEech--hhhHHHHHHHHHHHHHH-hccCCCCcceEEEcee
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNE-------KKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNW  161 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~  161 (264)
                      ++|.+.++||+|+||.||+|++..       ....+++|.++..  ......+..|+.+++.+ .|+|+     ++++++
T Consensus        12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----v~~~~~   86 (314)
T cd05099          12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNI-----INLLGV   86 (314)
T ss_pred             HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCe-----eeEEEE
Confidence            679999999999999999998642       3456899988743  23345678899999998 48777     999999


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 024661          162 FDYRNHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENIL  226 (264)
Q Consensus       162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nil  226 (264)
                      +.+.+.+|++|||+ +++|.+++....              ...+++..+..++.||+.||.|||++|++|+||||+|||
T Consensus        87 ~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil  166 (314)
T cd05099          87 CTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVL  166 (314)
T ss_pred             EccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEE
Confidence            99999999999999 899999997632              134888999999999999999999999999999999999


Q ss_pred             eecCCcEEeccCCCCCcCCCC--------cccceeeeeceeEe
Q 024661          227 LVSAEYVKVPDYKVPSPRHAF--------SFQTFLSMASRVYI  261 (264)
Q Consensus       227 i~~~~~v~l~Dfg~a~~~~~~--------~~~~~~y~ape~~~  261 (264)
                      ++.++.+||+|||+++.....        ...+..||+||.+.
T Consensus       167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  209 (314)
T cd05099         167 VTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALF  209 (314)
T ss_pred             EcCCCcEEEccccccccccccccccccccCCCCccccCHHHHc
Confidence            999999999999999764321        11235699999754

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.96  E-value=7e-28  Score=198.90  Aligned_cols=163  Identities=27%  Similarity=0.385  Sum_probs=142.6

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      ..|+..+.||.|+||.||+|.+..++..+|+|++...  ......+.+|+.+++.+.|+++     +++++.+.+.+..|
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~   78 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV-----TKYYGSYLKGTKLW   78 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEEECCEEE
Confidence            4588889999999999999999999999999998743  2445678889999999988887     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC-
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF-  247 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~-  247 (264)
                      +||||+ +++|.+++...   .+++..+..++.|++.||+|||+.+++|+||+|+||+++.++.++|+|||++...... 
T Consensus        79 lv~e~~~~~~L~~~i~~~---~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~  155 (277)
T cd06640          79 IIMEYLGGGSALDLLRAG---PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ  155 (277)
T ss_pred             EEEecCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc
Confidence            999999 89999998753   5889999999999999999999999999999999999999999999999998654322 


Q ss_pred             -----cccceeeeeceeEee
Q 024661          248 -----SFQTFLSMASRVYIC  262 (264)
Q Consensus       248 -----~~~~~~y~ape~~~~  262 (264)
                           ..++..|+|||++.+
T Consensus       156 ~~~~~~~~~~~y~apE~~~~  175 (277)
T cd06640         156 IKRNTFVGTPFWMAPEVIQQ  175 (277)
T ss_pred             cccccccCcccccCHhHhcc
Confidence                 235678999998643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.96  E-value=1.8e-28  Score=207.83  Aligned_cols=166  Identities=20%  Similarity=0.390  Sum_probs=141.8

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee--
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--  164 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~--  164 (264)
                      +.++|++.+.||.|++|.||+|.+..+++.|++|.+....   .....+.+|+.+++.+.|+++     +++++++..  
T Consensus         3 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~   77 (334)
T cd07855           3 VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNI-----IAIRDILRPPG   77 (334)
T ss_pred             hhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCc-----cCHHHhccccC
Confidence            3467999999999999999999999999999999987432   334567789999999999888     888887753  


Q ss_pred             --CCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          165 --RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       165 --~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                        ...+|+||||++++|.+++....  .+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.
T Consensus        78 ~~~~~~~lv~e~~~~~l~~~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~  155 (334)
T cd07855          78 ADFKDVYVVMDLMESDLHHIIHSDQ--PLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMAR  155 (334)
T ss_pred             CCCceEEEEEehhhhhHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccce
Confidence              45789999999889999987654  69999999999999999999999999999999999999999999999999986


Q ss_pred             cCCC----------CcccceeeeeceeEee
Q 024661          243 PRHA----------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       243 ~~~~----------~~~~~~~y~ape~~~~  262 (264)
                      ....          ...++..|++||.+.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  185 (334)
T cd07855         156 GLSSSPTEHKYFMTEYVATRWYRAPELLLS  185 (334)
T ss_pred             eecccCcCCCcccccccccccccChHHhcC
Confidence            5321          2246778999998643

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.96  E-value=5.5e-28  Score=201.42  Aligned_cols=164  Identities=21%  Similarity=0.356  Sum_probs=137.3

Q ss_pred             CCeEEEeecccCccEEEEEEEeCC----------------CCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCc
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNE----------------KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGT  153 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~----------------~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~  153 (264)
                      ++|++.+.||+|+||.||++.+..                ++..+|+|++...  ....+.+.+|+.+++.++|+++   
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i---   81 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNI---   81 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCc---
Confidence            579999999999999999986432                3456899988743  3345678899999999999888   


Q ss_pred             ceEEEceeeeeCCEEEEEEecC-CCCHHHHHHhcCC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 024661          154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSY---------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPE  223 (264)
Q Consensus       154 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~---------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~  223 (264)
                        +++++++...+..|++|||+ +++|.+++.....         ..+++..+..++.|++.||+|||++|++|+||||+
T Consensus        82 --~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~  159 (296)
T cd05095          82 --IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATR  159 (296)
T ss_pred             --ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChh
Confidence              99999999999999999999 8999999976431         23677889999999999999999999999999999


Q ss_pred             CEEeecCCcEEeccCCCCCcCCCC--------cccceeeeeceeE
Q 024661          224 NILLVSAEYVKVPDYKVPSPRHAF--------SFQTFLSMASRVY  260 (264)
Q Consensus       224 Nili~~~~~v~l~Dfg~a~~~~~~--------~~~~~~y~ape~~  260 (264)
                      |||++.++.++|+|||++......        ...+..|++||..
T Consensus       160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~  204 (296)
T cd05095         160 NCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESI  204 (296)
T ss_pred             eEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHH
Confidence            999999999999999998754221        1224569999964

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.96  E-value=5.6e-28  Score=199.49  Aligned_cols=157  Identities=24%  Similarity=0.358  Sum_probs=136.2

Q ss_pred             cccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC
Q 024661          100 MGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (264)
Q Consensus       100 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  175 (264)
                      ||+|+||+||+|.+..+|+.+++|.+....    .....+.+|+++++.++|+++     +.+++.+...+..|+||||+
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~lv~e~~   75 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFI-----VSLAYAFETKDDLCLVMTLM   75 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCE-----eeeeeEEecCCeEEEEEecC
Confidence            689999999999999999999999987432    234455789999999998877     99999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-----Ccc
Q 024661          176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-----FSF  249 (264)
Q Consensus       176 -~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-----~~~  249 (264)
                       +++|.+++.......+++..++.++.|++.||.|||++|++|+||+|+||++++++.++|+|||++.....     ...
T Consensus        76 ~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  155 (277)
T cd05577          76 NGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRA  155 (277)
T ss_pred             CCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCcccccc
Confidence             89999999876545789999999999999999999999999999999999999999999999999875432     223


Q ss_pred             cceeeeeceeEe
Q 024661          250 QTFLSMASRVYI  261 (264)
Q Consensus       250 ~~~~y~ape~~~  261 (264)
                      ++..|++||.+.
T Consensus       156 ~~~~y~~PE~~~  167 (277)
T cd05577         156 GTPGYMAPEVLQ  167 (277)
T ss_pred             CCCCcCCHHHhc
Confidence            567799999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.96  E-value=1.4e-27  Score=201.91  Aligned_cols=166  Identities=25%  Similarity=0.363  Sum_probs=143.4

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee-
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-  164 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~-  164 (264)
                      .+.++|++.+.||.|+||.||+|.+..+++.+++|.+.+.   ....+.+..|+++++.+.|+|+     +++.+++.. 
T Consensus         7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~~~~~~~   81 (328)
T cd07856           7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENI-----ISLSDIFISP   81 (328)
T ss_pred             ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCe-----eeEeeeEecC
Confidence            4668899999999999999999999999999999987542   2345677889999999999888     999998865 


Q ss_pred             CCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          165 RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       165 ~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      ....|++||+++++|.+++...   .+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++...
T Consensus        82 ~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~  158 (328)
T cd07856          82 LEDIYFVTELLGTDLHRLLTSR---PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQ  158 (328)
T ss_pred             CCcEEEEeehhccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCcccccccc
Confidence            5688999999988999888753   5888899999999999999999999999999999999999999999999998764


Q ss_pred             CCC---cccceeeeeceeEee
Q 024661          245 HAF---SFQTFLSMASRVYIC  262 (264)
Q Consensus       245 ~~~---~~~~~~y~ape~~~~  262 (264)
                      ...   ..++..|++||.+.+
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~  179 (328)
T cd07856         159 DPQMTGYVSTRYYRAPEIMLT  179 (328)
T ss_pred             CCCcCCCcccccccCceeeec
Confidence            432   246778999998753

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.96  E-value=7.1e-28  Score=197.99  Aligned_cols=159  Identities=19%  Similarity=0.204  Sum_probs=131.9

Q ss_pred             eecccCccEEEEEEEeC--CCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEe
Q 024661           98 SKMGEGTFGQVVECFDN--EKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE  173 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e  173 (264)
                      +.||+|+||.||+|...  .++..+++|.++...  .....+.+|+.+++.++|+|+     +++++.+.+....++|||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~lv~e   75 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNL-----LQCLGQCTEVTPYLLVME   75 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEcCCCCcEEEEE
Confidence            36899999999999864  345679999886432  334567889999999999888     999999999999999999


Q ss_pred             cC-CCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---
Q 024661          174 KL-GPSLYDFLRKNS---YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---  246 (264)
Q Consensus       174 ~~-~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---  246 (264)
                      |+ +++|.+++....   ....++..+..++.|++.||+|||+.|++|+||||+||+++.+++++|+|||++.....   
T Consensus        76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~  155 (269)
T cd05087          76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY  155 (269)
T ss_pred             CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcce
Confidence            99 899999997532   12456778889999999999999999999999999999999999999999999865322   


Q ss_pred             -----CcccceeeeeceeEe
Q 024661          247 -----FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 -----~~~~~~~y~ape~~~  261 (264)
                           ...++..|+|||++.
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~  175 (269)
T cd05087         156 YVTPDQLWVPLRWIAPELVD  175 (269)
T ss_pred             eecCCCcCCcccccCHhHhc
Confidence                 123456799999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.96  E-value=1.4e-27  Score=197.48  Aligned_cols=159  Identities=23%  Similarity=0.312  Sum_probs=129.8

Q ss_pred             ecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEec
Q 024661           99 KMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEK  174 (264)
Q Consensus        99 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  174 (264)
                      .||+|+||.||++.+..+++.+|+|.+.+..    .......+|..+++.+.+.  .+++++.+++.+..++..++||||
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~lv~e~   78 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG--DCPFIVCMTYAFHTPDKLCFILDL   78 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhC--CCCcEeEEEEEEecCCeEEEEEec
Confidence            4899999999999999999999999886432    1222334455444444321  124559999999999999999999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC----CCcc
Q 024661          175 L-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH----AFSF  249 (264)
Q Consensus       175 ~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~----~~~~  249 (264)
                      + +++|.+++....  .+++..+..++.|++.||+|||++||+|+||||+|||+++++.++|+|||++....    ....
T Consensus        79 ~~~~~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  156 (279)
T cd05633          79 MNGGDLHYHLSQHG--VFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV  156 (279)
T ss_pred             CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcC
Confidence            9 899999988765  69999999999999999999999999999999999999999999999999986432    2335


Q ss_pred             cceeeeeceeEe
Q 024661          250 QTFLSMASRVYI  261 (264)
Q Consensus       250 ~~~~y~ape~~~  261 (264)
                      ++..|||||.+.
T Consensus       157 ~~~~y~aPE~~~  168 (279)
T cd05633         157 GTHGYMAPEVLQ  168 (279)
T ss_pred             CCcCccCHHHhc
Confidence            788999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.96  E-value=6.3e-28  Score=199.47  Aligned_cols=164  Identities=21%  Similarity=0.238  Sum_probs=134.0

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcE----EEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKEL----VAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~----vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      ++|++.+.||.|+||.||+|.+..+++.    +++|.+...  ......+..|+..++.+.|+|+     +++++++. .
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~i-----v~~~~~~~-~   80 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYI-----VRLLGICP-G   80 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCc-----ceEEEEEC-C
Confidence            5689999999999999999999777763    667766432  2233566777778888888887     99998875 4


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      ...++++|++ +++|.+++.... ..+++..++.++.||+.||.|||++|++|+||||+|||++.++.+||+|||+++..
T Consensus        81 ~~~~~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~  159 (279)
T cd05111          81 ASLQLVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLL  159 (279)
T ss_pred             CccEEEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceec
Confidence            5678899999 999999998654 36899999999999999999999999999999999999999999999999999753


Q ss_pred             CC--------CcccceeeeeceeEee
Q 024661          245 HA--------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       245 ~~--------~~~~~~~y~ape~~~~  262 (264)
                      ..        ...++..||+||.+.+
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~pE~~~~  185 (279)
T cd05111         160 YPDDKKYFYSEHKTPIKWMALESILF  185 (279)
T ss_pred             cCCCcccccCCCCCcccccCHHHhcc
Confidence            21        1224567999998643

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.3e-27  Score=194.24  Aligned_cols=162  Identities=30%  Similarity=0.424  Sum_probs=144.5

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      +|++.+.||+|++|.||++.+..+++.+++|.+....   ...+.+.+|+++++.+.|+++     +.+++++.+.+..+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~   75 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNI-----VKYIGSIETSDSLY   75 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCc-----cEEEEEEEeCCEEE
Confidence            4889999999999999999999899999999987543   456788999999999999887     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC-
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF-  247 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~-  247 (264)
                      ++||++ +++|.+++....  .+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++...... 
T Consensus        76 ~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~  153 (254)
T cd06627          76 IILEYAENGSLRQIIKKFG--PFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS  153 (254)
T ss_pred             EEEecCCCCcHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence            999999 889999998764  7899999999999999999999999999999999999999999999999999765432 


Q ss_pred             -----cccceeeeeceeEe
Q 024661          248 -----SFQTFLSMASRVYI  261 (264)
Q Consensus       248 -----~~~~~~y~ape~~~  261 (264)
                           ..++..|++||.+.
T Consensus       154 ~~~~~~~~~~~y~~pe~~~  172 (254)
T cd06627         154 KDDASVVGTPYWMAPEVIE  172 (254)
T ss_pred             ccccccccchhhcCHhhhc
Confidence                 24677899999754

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.96  E-value=7.1e-28  Score=198.86  Aligned_cols=166  Identities=21%  Similarity=0.315  Sum_probs=139.7

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCC-----CCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeee
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~  163 (264)
                      .+.|.+.+.||+|++|.||+|.+..     ++..+++|.+...  ......+.+|+.+++.+.|+++     +++++++.
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~   79 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNI-----VRLIGVSF   79 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEc
Confidence            3669999999999999999999977     6788999987632  3344568889999999998887     99999999


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC---cEE
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKNSY-----RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE---YVK  234 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~---~v~  234 (264)
                      +.+..++||||+ +++|.+++.....     ..+++..+..++.||+.||+|||+++++|+||||+||+++.++   .++
T Consensus        80 ~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~k  159 (277)
T cd05036          80 ERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAK  159 (277)
T ss_pred             cCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceE
Confidence            989999999999 9999999976431     2588999999999999999999999999999999999998765   699


Q ss_pred             eccCCCCCcCCCCc--------ccceeeeeceeEe
Q 024661          235 VPDYKVPSPRHAFS--------FQTFLSMASRVYI  261 (264)
Q Consensus       235 l~Dfg~a~~~~~~~--------~~~~~y~ape~~~  261 (264)
                      |+|||+++......        ..+..|||||++.
T Consensus       160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  194 (277)
T cd05036         160 IADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFL  194 (277)
T ss_pred             eccCccccccCCccceecCCCCCccHhhCCHHHHh
Confidence            99999997653211        1235699999864

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=8.4e-28  Score=198.30  Aligned_cols=164  Identities=21%  Similarity=0.303  Sum_probs=140.5

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      .|++.+.||+|+||.||+|.+..+++.+++|.++..  ......+.+|+.+++.+.+  ..+++++++++++..+...|+
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~--~~~~~vi~~~~~~~~~~~~~l   79 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQ--SQPPNITKYYGSYLKGPRLWI   79 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhcc--CCCCCeeeEeeeeeeCCEEEE
Confidence            478889999999999999999999999999998643  3345667889999999973  122444999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---  246 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---  246 (264)
                      ||||+ +++|.+++...   .+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.....   
T Consensus        80 v~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06917          80 IMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS  156 (277)
T ss_pred             EEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc
Confidence            99999 88999998764   589999999999999999999999999999999999999999999999999875432   


Q ss_pred             ---CcccceeeeeceeEe
Q 024661          247 ---FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~  261 (264)
                         ...++..|+|||.+.
T Consensus       157 ~~~~~~~~~~y~aPE~~~  174 (277)
T cd06917         157 KRSTFVGTPYWMAPEVIT  174 (277)
T ss_pred             ccccccCCcceeCHHHhc
Confidence               224677899999764

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.96  E-value=4.1e-28  Score=200.99  Aligned_cols=163  Identities=22%  Similarity=0.341  Sum_probs=144.1

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      ++|++.+.||+|+||+||++.+..+++.+++|++...  ......+.+|+++++.++|+++     +++++.+...+.+|
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~~~   79 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYI-----VSFYGAFLNENNIC   79 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCc-----ceEeeeEecCCEEE
Confidence            5689999999999999999999999999999987643  3445778899999999999888     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEeecCCcEEeccCCCCCcCC--
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH--  245 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~--  245 (264)
                      +||||+ +++|.+++....  .+++..+..++.|++.+|.|||+ .+++|+||+|+||+++.++.++|+|||++....  
T Consensus        80 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~  157 (284)
T cd06620          80 MCMEFMDCGSLDRIYKKGG--PIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS  157 (284)
T ss_pred             EEEecCCCCCHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence            999999 889999987754  68999999999999999999996 699999999999999999999999999986532  


Q ss_pred             --CCcccceeeeeceeEe
Q 024661          246 --AFSFQTFLSMASRVYI  261 (264)
Q Consensus       246 --~~~~~~~~y~ape~~~  261 (264)
                        ....++..|++||.+.
T Consensus       158 ~~~~~~~~~~~~aPE~~~  175 (284)
T cd06620         158 IADTFVGTSTYMSPERIQ  175 (284)
T ss_pred             ccCccccCcccCCHHHHc
Confidence              2235788999999764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.96  E-value=5.5e-28  Score=196.94  Aligned_cols=163  Identities=23%  Similarity=0.311  Sum_probs=141.1

Q ss_pred             eEEEeecccCccEEEEEEEeCCCC----cEEEEEEEechhh--hHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKK----ELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~----~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      +++.+.||.|+||.||++.+...+    ..+++|.+.....  ....+..|+.+++.+.|+++     +++++.+.+.+.
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~   75 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNI-----VKLLGVCTEEEP   75 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCch-----heEEEEEcCCCe
Confidence            356789999999999999998766    8899999875433  56788899999999988887     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      .|++||++ +++|.+++.......+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus        76 ~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~  155 (258)
T smart00219       76 LMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYD  155 (258)
T ss_pred             eEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccc
Confidence            99999999 89999999875522389999999999999999999999999999999999999999999999999976443


Q ss_pred             C-------cccceeeeeceeEe
Q 024661          247 F-------SFQTFLSMASRVYI  261 (264)
Q Consensus       247 ~-------~~~~~~y~ape~~~  261 (264)
                      .       ..++..|++||.+.
T Consensus       156 ~~~~~~~~~~~~~~y~~Pe~~~  177 (258)
T smart00219      156 DDYYKKKGGKLPIRWMAPESLK  177 (258)
T ss_pred             ccccccccCCCcccccChHHhc
Confidence            2       23557899999753

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.95  E-value=9.4e-28  Score=195.69  Aligned_cols=163  Identities=26%  Similarity=0.354  Sum_probs=140.0

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      .+|++.+.||+|+||.||+|.+.. +..+++|.+.........+.+|+++++.+.|+++     +++++++......|++
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~-~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~~v   77 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLE-KRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKL-----VQLYGVCTERSPICLV   77 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeC-CCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCe-----eeEEEEEccCCceEEE
Confidence            468999999999999999998753 6679999887655555678899999999998887     9999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC---
Q 024661          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF---  247 (264)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~---  247 (264)
                      |||+ +++|.+++.... ..++++.++.++.|++.+|.|||+++++|+||||+||+++.++.++|+|||++......   
T Consensus        78 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~  156 (256)
T cd05112          78 FEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT  156 (256)
T ss_pred             EEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCccc
Confidence            9999 899999987654 35889999999999999999999999999999999999999999999999998753221   


Q ss_pred             ----cccceeeeeceeEe
Q 024661          248 ----SFQTFLSMASRVYI  261 (264)
Q Consensus       248 ----~~~~~~y~ape~~~  261 (264)
                          ...+..|+|||.+.
T Consensus       157 ~~~~~~~~~~~~aPe~~~  174 (256)
T cd05112         157 SSTGTKFPVKWSSPEVFS  174 (256)
T ss_pred             ccCCCccchhhcCHhHhc
Confidence                12345799999765

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.95  E-value=1.1e-27  Score=197.79  Aligned_cols=164  Identities=20%  Similarity=0.288  Sum_probs=138.7

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCc----EEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKE----LVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      .++|++.+.||+|+||.||+|.+..+++    .+++|.+....  .....+.+|+.+++.+.|+|+     +++++++..
T Consensus         6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~   80 (279)
T cd05057           6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHV-----VRLLGICLS   80 (279)
T ss_pred             HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEec
Confidence            3679999999999999999999876654    58899876432  345678889999999999888     999988877


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                       ...++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||+++.
T Consensus        81 -~~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~  158 (279)
T cd05057          81 -SQVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKL  158 (279)
T ss_pred             -CceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCccccc
Confidence             7899999999 999999998754 3589999999999999999999999999999999999999999999999999976


Q ss_pred             CCCCc--------ccceeeeeceeEe
Q 024661          244 RHAFS--------FQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~~~--------~~~~~y~ape~~~  261 (264)
                      .....        ..+..|++||.+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~~PE~~~  184 (279)
T cd05057         159 LDVDEKEYHAEGGKVPIKWMALESIL  184 (279)
T ss_pred             ccCcccceecCCCcccccccCHHHhh
Confidence            43211        1245699999753

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.95  E-value=8.5e-28  Score=198.80  Aligned_cols=163  Identities=28%  Similarity=0.490  Sum_probs=141.0

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh--hHHHHHHHHHHHHHHh-ccCCCCcceEEEceeeeeCCEEEE
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      |++.+.||+|++|.||+|....+++.+++|.+.....  ......+|+..++.+. |+++     +.+++.+.+++..|+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i-----~~~~~~~~~~~~~~l   75 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNI-----VKLKEVFRENDELYF   75 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCc-----hhHHHHhhcCCcEEE
Confidence            6788999999999999999998899999998864322  2234456888898888 8877     999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC----
Q 024661          171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA----  246 (264)
Q Consensus       171 v~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~----  246 (264)
                      ||||++++|.+++.......+++..+..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||++.....    
T Consensus        76 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~  155 (283)
T cd07830          76 VFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPY  155 (283)
T ss_pred             EEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCc
Confidence            9999988999998876545789999999999999999999999999999999999999999999999999976443    


Q ss_pred             -CcccceeeeeceeEe
Q 024661          247 -FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 -~~~~~~~y~ape~~~  261 (264)
                       ...++..|+|||++.
T Consensus       156 ~~~~~~~~~~aPE~~~  171 (283)
T cd07830         156 TDYVSTRWYRAPEILL  171 (283)
T ss_pred             CCCCCcccccCceeee
Confidence             234677899999875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.95  E-value=9.9e-28  Score=204.17  Aligned_cols=165  Identities=22%  Similarity=0.368  Sum_probs=141.2

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .+.++|.+.+.||+|+||.||+|.+..+++.||+|.+....   ...+.+.+|+.+++.++|+|+     +++++++...
T Consensus        14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i-----v~~~~~~~~~   88 (345)
T cd07877          14 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV-----IGLLDVFTPA   88 (345)
T ss_pred             hccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcc-----cceeeeeeec
Confidence            45688999999999999999999999999999999986432   234567789999999999988     8888877542


Q ss_pred             ------CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          166 ------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       166 ------~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                            ...|+++++++++|.+++...   .+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||
T Consensus        89 ~~~~~~~~~~lv~~~~~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg  165 (345)
T cd07877          89 RSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG  165 (345)
T ss_pred             ccccccccEEEEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccc
Confidence                  457899999999999888653   58999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCCC---cccceeeeeceeEe
Q 024661          240 VPSPRHAF---SFQTFLSMASRVYI  261 (264)
Q Consensus       240 ~a~~~~~~---~~~~~~y~ape~~~  261 (264)
                      ++......   ..++..|+|||++.
T Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~  190 (345)
T cd07877         166 LARHTDDEMTGYVATRWYRAPEIML  190 (345)
T ss_pred             ccccccccccccccCCCccCHHHHh
Confidence            98764432   24677899999764

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.95  E-value=1.7e-27  Score=196.84  Aligned_cols=159  Identities=22%  Similarity=0.286  Sum_probs=130.0

Q ss_pred             ecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEec
Q 024661           99 KMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEK  174 (264)
Q Consensus        99 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  174 (264)
                      .||+|+||.||+|.+..+++.||+|.+.+..    ........|..+++.+.+.  .+++++.+.+.+...+.+|+||||
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~v~e~   78 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG--DCPFIVCMSYAFHTPDKLSFILDL   78 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhC--CCCcEeeeeeeeecCCEEEEEEec
Confidence            4899999999999999999999999886432    1122234444444444331  234559999999999999999999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC----Ccc
Q 024661          175 L-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA----FSF  249 (264)
Q Consensus       175 ~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~----~~~  249 (264)
                      + +++|.+++....  .+++..+..++.|++.||.|||+.+|+|+||||+||+++.++.++|+|||++.....    ...
T Consensus        79 ~~g~~L~~~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~  156 (278)
T cd05606          79 MNGGDLHYHLSQHG--VFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV  156 (278)
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcC
Confidence            9 999999887654  799999999999999999999999999999999999999999999999999865332    335


Q ss_pred             cceeeeeceeEe
Q 024661          250 QTFLSMASRVYI  261 (264)
Q Consensus       250 ~~~~y~ape~~~  261 (264)
                      ++..|+|||.+.
T Consensus       157 ~~~~y~aPE~~~  168 (278)
T cd05606         157 GTHGYMAPEVLQ  168 (278)
T ss_pred             CCcCCcCcHHhc
Confidence            788999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.95  E-value=9.5e-28  Score=199.79  Aligned_cols=163  Identities=26%  Similarity=0.352  Sum_probs=142.6

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      .++|.+.+.||+|+||.||++.+..++..+++|.+... ....+.+.+|+.+++.+.|+++     +.+++.+...+..|
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i-----~~~~~~~~~~~~~~   92 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNI-----VNYLDSYLVGDELW   92 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCe-----eehhheeeeCCcEE
Confidence            46899999999999999999999888999999998642 3345677889999999988887     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC--
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA--  246 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~--  246 (264)
                      +|+||+ +++|.+++.+.   .+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.....  
T Consensus        93 lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~  169 (293)
T cd06647          93 VVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ  169 (293)
T ss_pred             EEEecCCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccc
Confidence            999999 99999998764   478999999999999999999999999999999999999999999999998765332  


Q ss_pred             ----CcccceeeeeceeEe
Q 024661          247 ----FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ----~~~~~~~y~ape~~~  261 (264)
                          ...++..|++||.+.
T Consensus       170 ~~~~~~~~~~~y~~PE~~~  188 (293)
T cd06647         170 SKRSTMVGTPYWMAPEVVT  188 (293)
T ss_pred             cccccccCChhhcCchhhc
Confidence                224667799999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.95  E-value=6.2e-28  Score=199.07  Aligned_cols=163  Identities=27%  Similarity=0.382  Sum_probs=143.1

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech----hhhHHHHHHHHHHHHHHh-ccCCCCcceEEEceeeeeCC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~~~  166 (264)
                      ++|.+.+.||+|+||.||+|.+..+++.+++|++.+.    ......+.+|+.+++.+. |+|+     +++++.+.+.+
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i-----~~~~~~~~~~~   75 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGI-----IKLYYTFQDEE   75 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCc-----hhHHHHhcCCc
Confidence            3699999999999999999999999999999998752    233466788999999998 7777     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      ..++|||++ +++|.+++.+..  .+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++....
T Consensus        76 ~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~  153 (280)
T cd05581          76 NLYFVLEYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLD  153 (280)
T ss_pred             eEEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence            999999999 999999998765  79999999999999999999999999999999999999999999999999987543


Q ss_pred             CCc--------------------------ccceeeeeceeEe
Q 024661          246 AFS--------------------------FQTFLSMASRVYI  261 (264)
Q Consensus       246 ~~~--------------------------~~~~~y~ape~~~  261 (264)
                      ...                          .++..|++||.+.
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~  195 (280)
T cd05581         154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLN  195 (280)
T ss_pred             CccccccCCCCCccccccccccccccccccCCccccCHHHhC
Confidence            322                          3567799999754

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.95  E-value=1.2e-27  Score=197.17  Aligned_cols=165  Identities=18%  Similarity=0.259  Sum_probs=140.2

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCC-----CcEEEEEEEechhh--hHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ++|++...||+|+||.||+|+.+.+     .+.+++|.+.....  ..+.+.+|+++++.+.|+++     +.+++++.+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~   79 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNV-----VRLLGLCRE   79 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcce-----eeeEEEECC
Confidence            5699999999999999999997543     46799998764332  45678999999999999887     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCC-------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEec
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSY-------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  236 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~  236 (264)
                      ....|+||||+ +++|.+++.....       ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+
T Consensus        80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~  159 (275)
T cd05046          80 AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVS  159 (275)
T ss_pred             CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEc
Confidence            99999999999 8999999986541       158999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcCCC-------CcccceeeeeceeEe
Q 024661          237 DYKVPSPRHA-------FSFQTFLSMASRVYI  261 (264)
Q Consensus       237 Dfg~a~~~~~-------~~~~~~~y~ape~~~  261 (264)
                      |||++.....       ...++..|++||.+.
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~  191 (275)
T cd05046         160 LLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQ  191 (275)
T ss_pred             ccccccccCcccccccCCceeEEeecChhhhc
Confidence            9999864321       223466799999754

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.95  E-value=1.9e-27  Score=200.14  Aligned_cols=166  Identities=25%  Similarity=0.326  Sum_probs=143.5

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech----hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      ....|...+.||+|+||.||++.+..++..+++|.+...    ......+.+|+++++.++|+|+     +++++++.++
T Consensus        23 ~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~   97 (317)
T cd06635          23 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNS-----IEYKGCYLRE   97 (317)
T ss_pred             chhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCE-----EEEEEEEeeC
Confidence            334488899999999999999999999999999998642    2334567889999999999887     9999999999


Q ss_pred             CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          166 NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       166 ~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      +..|+||||+.++|.+++.... ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++....
T Consensus        98 ~~~~lv~e~~~g~l~~~~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~  176 (317)
T cd06635          98 HTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIAS  176 (317)
T ss_pred             CeEEEEEeCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccC
Confidence            9999999999778888876543 368999999999999999999999999999999999999999999999999987544


Q ss_pred             C--CcccceeeeeceeEe
Q 024661          246 A--FSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ~--~~~~~~~y~ape~~~  261 (264)
                      .  ...++..|+|||.+.
T Consensus       177 ~~~~~~~~~~y~aPE~~~  194 (317)
T cd06635         177 PANSFVGTPYWMAPEVIL  194 (317)
T ss_pred             CcccccCCccccChhhhh
Confidence            3  335788899999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.95  E-value=1.1e-27  Score=198.13  Aligned_cols=165  Identities=21%  Similarity=0.316  Sum_probs=139.1

Q ss_pred             CCeEEEeecccCccEEEEEEEeC-----CCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .+|++.++||+|+||.||++...     .++..+++|.+... ....+.+.+|+++++.++|+|+     +++++++.+.
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~   79 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHI-----VRFYGVCTEG   79 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCC-----ceEEEEEecC
Confidence            46888999999999999999743     34667899987643 3445678899999999999888     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSY-------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~-------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~  231 (264)
                      ...+++|||+ +++|.+++.....             ..+++..++.++.|++.||+|||++|++|+||||+|||+++++
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~  159 (280)
T cd05092          80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGL  159 (280)
T ss_pred             CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCC
Confidence            9999999999 8999999976431             2478899999999999999999999999999999999999999


Q ss_pred             cEEeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          232 YVKVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       232 ~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      .++|+|||++.....        ...++..|+|||.+.
T Consensus       160 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  197 (280)
T cd05092         160 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIL  197 (280)
T ss_pred             CEEECCCCceeEcCCCceeecCCCccccccccCHHHhc
Confidence            999999999864322        222356799999754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.95  E-value=2.7e-28  Score=201.31  Aligned_cols=163  Identities=29%  Similarity=0.398  Sum_probs=142.2

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      +.|+..+.||.|+||.||+|.+..+++.+++|.+...  ....+.+.+|+.+++.+.|+++     +++++.+...+..|
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~   78 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYI-----TRYYGSYLKGTKLW   78 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCcc-----HhhhcccccCCceE
Confidence            3477788999999999999999989999999988743  3345678899999999998888     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC-
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF-  247 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~-  247 (264)
                      +||||+ +++|.+++...   .+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++...... 
T Consensus        79 lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~  155 (277)
T cd06642          79 IIMEYLGGGSALDLLKPG---PLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ  155 (277)
T ss_pred             EEEEccCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcc
Confidence            999999 88999988653   5899999999999999999999999999999999999999999999999998764332 


Q ss_pred             -----cccceeeeeceeEee
Q 024661          248 -----SFQTFLSMASRVYIC  262 (264)
Q Consensus       248 -----~~~~~~y~ape~~~~  262 (264)
                           ..++..|++||.+.+
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~  175 (277)
T cd06642         156 IKRNTFVGTPFWMAPEVIKQ  175 (277)
T ss_pred             hhhhcccCcccccCHHHhCc
Confidence                 236778999998654

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>PHA02988 hypothetical protein; Provisional

Probab=99.95  E-value=7.2e-28  Score=199.57  Aligned_cols=156  Identities=11%  Similarity=0.110  Sum_probs=134.3

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechhh----hHHHHHHHHHHHHHHhccCCCCcceEEEceeeee----CCEEE
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY----RNHIC  169 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~----~~~~~  169 (264)
                      ..||+|+++.||+|.+  +|+.||+|.++....    ..+.+.+|+.++++++|+|+     +++++++.+    ...++
T Consensus        26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-----v~~~g~~~~~~~~~~~~~   98 (283)
T PHA02988         26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNI-----LKIYGFIIDIVDDLPRLS   98 (283)
T ss_pred             eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCE-----EEEeeeEEecccCCCceE
Confidence            4689999999999987  588999999875432    24667799999999999988     999999876    45789


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-  246 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-  246 (264)
                      +||||+ +|+|.+++....  .+++.....++.|++.||.|||+ .+++||||||+|||++.++.+||+|||++..... 
T Consensus        99 lv~Ey~~~g~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~  176 (283)
T PHA02988         99 LILEYCTRGYLREVLDKEK--DLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP  176 (283)
T ss_pred             EEEEeCCCCcHHHHHhhCC--CCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc
Confidence            999999 899999998765  78899999999999999999998 4999999999999999999999999999875332 


Q ss_pred             --CcccceeeeeceeEee
Q 024661          247 --FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 --~~~~~~~y~ape~~~~  262 (264)
                        ...++..|+|||++.+
T Consensus       177 ~~~~~~~~~y~aPE~~~~  194 (283)
T PHA02988        177 PFKNVNFMVYFSYKMLND  194 (283)
T ss_pred             cccccCcccccCHHHhhh
Confidence              2347888999998753

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.95  E-value=1.2e-27  Score=195.81  Aligned_cols=155  Identities=26%  Similarity=0.328  Sum_probs=137.8

Q ss_pred             cccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC
Q 024661          100 MGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (264)
Q Consensus       100 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  175 (264)
                      ||.|++|.||+|.+..+++.+++|++.+..    ...+.+.+|+.+++.+.|+++     +.+++.+.++..+|++|||+
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~lv~e~~   75 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFI-----VKLYRTFKDKKYIYMLMEYC   75 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCE-----eeeeeeEEcCCccEEEEecC
Confidence            689999999999999999999999987432    345678899999999999887     99999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC-----cc
Q 024661          176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF-----SF  249 (264)
Q Consensus       176 -~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~-----~~  249 (264)
                       +++|.+++.+..  .+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++......     ..
T Consensus        76 ~~~~L~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~  153 (262)
T cd05572          76 LGGELWTILRDRG--LFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFC  153 (262)
T ss_pred             CCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccccccccc
Confidence             899999998765  6899999999999999999999999999999999999999999999999998765432     34


Q ss_pred             cceeeeeceeEe
Q 024661          250 QTFLSMASRVYI  261 (264)
Q Consensus       250 ~~~~y~ape~~~  261 (264)
                      ++..|++||.+.
T Consensus       154 ~~~~~~~PE~~~  165 (262)
T cd05572         154 GTPEYVAPEIIL  165 (262)
T ss_pred             CCcCccChhHhc
Confidence            677899999763

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.95  E-value=6.8e-28  Score=204.51  Aligned_cols=167  Identities=30%  Similarity=0.426  Sum_probs=141.8

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHH-hccCCCCcceEEEceeee
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~  163 (264)
                      ..+.++|++.+.||+|+||.||+|.+..+++.+++|.+...   ......+.+|+.+++++ +|+|+     +++++++.
T Consensus         3 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni-----~~~~~~~~   77 (337)
T cd07852           3 KHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNI-----VKLLNVIK   77 (337)
T ss_pred             chhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCc-----cceeeeec
Confidence            35668899999999999999999999989999999987532   23345677899999999 88888     99999876


Q ss_pred             e--CCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCC
Q 024661          164 Y--RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVP  241 (264)
Q Consensus       164 ~--~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a  241 (264)
                      .  ...+|+||||++++|.+++...   .+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++
T Consensus        78 ~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~  154 (337)
T cd07852          78 AENDKDIYLVFEYMETDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLA  154 (337)
T ss_pred             cCCCceEEEEecccccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccch
Confidence            4  3478999999988999988764   5788899999999999999999999999999999999999999999999998


Q ss_pred             CcCCCC-----------cccceeeeeceeEee
Q 024661          242 SPRHAF-----------SFQTFLSMASRVYIC  262 (264)
Q Consensus       242 ~~~~~~-----------~~~~~~y~ape~~~~  262 (264)
                      ......           ..++..|++||++.+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  186 (337)
T cd07852         155 RSLSELEENPENPVLTDYVATRWYRAPEILLG  186 (337)
T ss_pred             hccccccccccCcchhcccccccccCceeeec
Confidence            753221           236778999998754

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.95  E-value=5.2e-28  Score=204.55  Aligned_cols=163  Identities=24%  Similarity=0.372  Sum_probs=143.0

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC---
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN---  166 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~---  166 (264)
                      +|++.+.||.|++|.||+|.+..+++.+++|.+...   ....+.+.+|+.+++.++|+++     +.+.+++....   
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~   75 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENI-----IGLLDILRPPSPED   75 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcch-----hhhhhhhcccCccc
Confidence            589999999999999999999988999999988753   2345678889999999998887     88888887765   


Q ss_pred             --EEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          167 --HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       167 --~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                        .+|++|||++++|.+++....  .+++..++.++.||+.||.|||++||+|+||||+|||++.++.++|+|||++...
T Consensus        76 ~~~~~lv~e~~~~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~  153 (330)
T cd07834          76 FNDVYIVTELMETDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGV  153 (330)
T ss_pred             ccceEEEecchhhhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence              889999999889999987654  7999999999999999999999999999999999999999999999999999764


Q ss_pred             CCC---------cccceeeeeceeEee
Q 024661          245 HAF---------SFQTFLSMASRVYIC  262 (264)
Q Consensus       245 ~~~---------~~~~~~y~ape~~~~  262 (264)
                      ...         ..++..|+|||.+.+
T Consensus       154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~  180 (330)
T cd07834         154 DPDEDEKGFLTEYVVTRWYRAPELLLS  180 (330)
T ss_pred             cccccccccccccccccCcCCceeeec
Confidence            332         246778999998764

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.95  E-value=3e-28  Score=202.73  Aligned_cols=165  Identities=22%  Similarity=0.314  Sum_probs=141.6

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ..+.|.....||.|+||.||++.+..++..++||.+... ....+.+.+|+.+++.++|+|+     +.+++.+...+..
T Consensus        20 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----i~~~~~~~~~~~~   94 (292)
T cd06658          20 PREYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENV-----VDMYNSYLVGDEL   94 (292)
T ss_pred             hHHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcH-----HHHHHheecCCeE
Confidence            334566678899999999999999999999999998643 3445678899999999999888     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-  246 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-  246 (264)
                      |+||||+ +++|.+++...   .+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++..... 
T Consensus        95 ~lv~e~~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~  171 (292)
T cd06658          95 WVVMEFLEGGALTDIVTHT---RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE  171 (292)
T ss_pred             EEEEeCCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccc
Confidence            9999999 88999988643   589999999999999999999999999999999999999999999999999864321 


Q ss_pred             -----CcccceeeeeceeEee
Q 024661          247 -----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 -----~~~~~~~y~ape~~~~  262 (264)
                           ...++..|+|||.+.+
T Consensus       172 ~~~~~~~~~~~~y~aPE~~~~  192 (292)
T cd06658         172 VPKRKSLVGTPYWMAPEVISR  192 (292)
T ss_pred             cccCceeecCccccCHHHHcc
Confidence                 2246778999997643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.95  E-value=1.2e-27  Score=197.47  Aligned_cols=162  Identities=27%  Similarity=0.382  Sum_probs=141.3

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      -|++.+.||.|+||.||+|.+..+++.+|+|.+...  ......+.+|+.+++.+.|+++     +++++++..++..|+
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~~~l   79 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV-----TKYYGSYLKDTKLWI   79 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCE-----eEEEEEEEeCCeEEE
Confidence            378889999999999999999889999999987643  2344678889999999998887     999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC--
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF--  247 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~--  247 (264)
                      ||||+ +++|.+++...   .+++..+..++.|++.+|.|||+.|++|+||+|+||+++.++.++|+|||++......  
T Consensus        80 v~e~~~~~~l~~~i~~~---~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06641          80 IMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI  156 (277)
T ss_pred             EEEeCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchh
Confidence            99999 88999998754   5899999999999999999999999999999999999999999999999998654332  


Q ss_pred             ----cccceeeeeceeEee
Q 024661          248 ----SFQTFLSMASRVYIC  262 (264)
Q Consensus       248 ----~~~~~~y~ape~~~~  262 (264)
                          ..++..|++||.+.+
T Consensus       157 ~~~~~~~~~~y~~PE~~~~  175 (277)
T cd06641         157 KRNTFVGTPFWMAPEVIKQ  175 (277)
T ss_pred             hhccccCCccccChhhhcc
Confidence                236778999997643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.95  E-value=2e-27  Score=194.75  Aligned_cols=165  Identities=22%  Similarity=0.292  Sum_probs=143.6

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      ++|++.+.||.|+||.||+|....++..+++|++....  ...+.+.+|+.+++.++|+++     +++++.+...+..|
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~   75 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNV-----VKYYTSFVVGDELW   75 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCE-----EEEEEEEeeCCEEE
Confidence            46999999999999999999998899999999986432  345678899999999998887     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-
Q 024661          170 IVFEKL-GPSLYDFLRKNSY-RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-  246 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-  246 (264)
                      ++||++ +++|.+++..... ..+++..+..++.|++.||.|||++|++|+||+|+||++++++.++|+|||++..... 
T Consensus        76 iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~  155 (267)
T cd06610          76 LVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADG  155 (267)
T ss_pred             EEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccC
Confidence            999999 8999999986432 3689999999999999999999999999999999999999999999999998864322 


Q ss_pred             ---------CcccceeeeeceeEe
Q 024661          247 ---------FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ---------~~~~~~~y~ape~~~  261 (264)
                               ...++..|++||.+.
T Consensus       156 ~~~~~~~~~~~~~~~~y~~Pe~~~  179 (267)
T cd06610         156 GDRTRKVRKTFVGTPCWMAPEVME  179 (267)
T ss_pred             ccccccccccccCChhhcChHHHc
Confidence                     123677899999764

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.95  E-value=3.4e-28  Score=201.28  Aligned_cols=165  Identities=21%  Similarity=0.269  Sum_probs=138.1

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCC-----CcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      .+|++.++||.|+||.||+|.+..+     +..+|+|+++...  ...+.+.+|+.+++.++|+++     +++++.+.+
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~i-----v~~~~~~~~   79 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNI-----VCLLGVVTK   79 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCc-----CeEEEEEcC
Confidence            4588899999999999999987543     5789999987432  334668889999999999888     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS  229 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~  229 (264)
                      ....++++||+ +++|.+++....              ...+++..+..++.|++.||.|||++||+||||||+||+++.
T Consensus        80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~  159 (283)
T cd05091          80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD  159 (283)
T ss_pred             CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecC
Confidence            99999999999 899999986321              124788889999999999999999999999999999999999


Q ss_pred             CCcEEeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          230 AEYVKVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       230 ~~~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      ++.+||+|||+++....        ...++..|||||.+.
T Consensus       160 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  199 (283)
T cd05091         160 KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIM  199 (283)
T ss_pred             CCceEecccccccccccchheeeccCccCCccccCHHHHh
Confidence            99999999999875322        223456899999764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.95  E-value=1.1e-27  Score=199.13  Aligned_cols=164  Identities=19%  Similarity=0.309  Sum_probs=136.7

Q ss_pred             CeEEEeecccCccEEEEEEEeCC-----CCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           93 RYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      +|++.+.||+|+||.||+|.+..     ....+++|.+....  ...+.+.+|+.+++.+.|+|+     +++++.+..+
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~   75 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHV-----IKLYGACSQD   75 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCE-----eeEEEEEecC
Confidence            47889999999999999998753     23568888876432  334678889999999998887     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNS----------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKP  222 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~----------------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp  222 (264)
                      +..+++|||+ +++|.+++....                      ...+++..++.++.|++.||.|||++|++||||||
T Consensus        76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp  155 (290)
T cd05045          76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAA  155 (290)
T ss_pred             CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhh
Confidence            9999999999 899999987431                      12478889999999999999999999999999999


Q ss_pred             CCEEeecCCcEEeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          223 ENILLVSAEYVKVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       223 ~Nili~~~~~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      +|||+++++.++|+|||+++....        ....+..|++||.+.
T Consensus       156 ~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~  202 (290)
T cd05045         156 RNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLF  202 (290)
T ss_pred             heEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHc
Confidence            999999999999999999875321        123456799999753

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.95  E-value=3.7e-28  Score=202.66  Aligned_cols=161  Identities=21%  Similarity=0.324  Sum_probs=139.7

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      |.....||.|+||.||+|.+..+++.+++|++... ....+.+.+|+.+++.+.|+|+     +++++.+..++..|++|
T Consensus        23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i-----~~~~~~~~~~~~~~iv~   97 (297)
T cd06659          23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNV-----VEMYKSYLVGEELWVLM   97 (297)
T ss_pred             HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCch-----hhhhhheeeCCeEEEEE
Confidence            55566899999999999999989999999998643 2345667889999999999887     99999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-----
Q 024661          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-----  246 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-----  246 (264)
                      ||+ +++|.+++...   .+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.....     
T Consensus        98 e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~  174 (297)
T cd06659          98 EFLQGGALTDIVSQT---RLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR  174 (297)
T ss_pred             ecCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccc
Confidence            999 88999887653   589999999999999999999999999999999999999999999999999864322     


Q ss_pred             -CcccceeeeeceeEee
Q 024661          247 -FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 -~~~~~~~y~ape~~~~  262 (264)
                       ...++..|+|||++.+
T Consensus       175 ~~~~~~~~y~aPE~~~~  191 (297)
T cd06659         175 KSLVGTPYWMAPEVISR  191 (297)
T ss_pred             cceecCccccCHHHHcc
Confidence             2347788999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.95  E-value=3e-27  Score=198.56  Aligned_cols=167  Identities=23%  Similarity=0.327  Sum_probs=144.1

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech----hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ...+.|...++||+|+||.||+|.+..+++.+++|.+...    ......+.+|+++++.++|+++     +.+++++.+
T Consensus        18 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~   92 (313)
T cd06633          18 DPEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNT-----IEYKGCYLK   92 (313)
T ss_pred             CHHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCC-----ccEEEEEEe
Confidence            3345588888999999999999999999999999998632    2333567889999999999888     999999999


Q ss_pred             CCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          165 RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       165 ~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      ....|+||||+.++|.+++.... ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++...
T Consensus        93 ~~~~~lv~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~  171 (313)
T cd06633          93 EHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKS  171 (313)
T ss_pred             CCEEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCccc
Confidence            99999999999888988887543 36899999999999999999999999999999999999999999999999998754


Q ss_pred             CC--CcccceeeeeceeEe
Q 024661          245 HA--FSFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~~--~~~~~~~y~ape~~~  261 (264)
                      ..  ...++..|++||++.
T Consensus       172 ~~~~~~~~~~~y~aPE~~~  190 (313)
T cd06633         172 SPANSFVGTPYWMAPEVIL  190 (313)
T ss_pred             CCCCCccccccccChhhcc
Confidence            32  335778899999874

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.95  E-value=2.3e-27  Score=194.03  Aligned_cols=162  Identities=24%  Similarity=0.382  Sum_probs=144.5

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      .|++.+.||.|++|.||+|.+..+++.+++|.+....  .....+.+|+..++.++|+++     +++++++...+..++
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~l   76 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYV-----VKCYGAFYKEGEISI   76 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCe-----eeEEEEEccCCeEEE
Confidence            5889999999999999999999999999999987543  356778899999999998887     999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC--
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA--  246 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~--  246 (264)
                      +|||+ +++|.+++....  .+++..++.++.|++.||.|||+ .|++|+||+|+||+++.++.++|+|||++.....  
T Consensus        77 v~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~  154 (264)
T cd06623          77 VLEYMDGGSLADLLKKVG--KIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL  154 (264)
T ss_pred             EEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence            99999 899999998764  78999999999999999999999 9999999999999999999999999999876433  


Q ss_pred             ----CcccceeeeeceeEe
Q 024661          247 ----FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ----~~~~~~~y~ape~~~  261 (264)
                          ...++..|++||.+.
T Consensus       155 ~~~~~~~~~~~y~~pE~~~  173 (264)
T cd06623         155 DQCNTFVGTVTYMSPERIQ  173 (264)
T ss_pred             CcccceeecccccCHhhhC
Confidence                223567899999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.95  E-value=1.7e-27  Score=194.40  Aligned_cols=155  Identities=25%  Similarity=0.362  Sum_probs=130.5

Q ss_pred             ecccCccEEEEEEEe--CCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEe
Q 024661           99 KMGEGTFGQVVECFD--NEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE  173 (264)
Q Consensus        99 ~lg~G~~g~V~~~~~--~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e  173 (264)
                      +||+|+||.||+|.+  ..++..+|+|+++..   ....+.+.+|+.+++.+.|+++     +++++++. .+..++|||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~-~~~~~lv~e   75 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYI-----VRMIGICE-AESWMLVME   75 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEc-CCCcEEEEe
Confidence            689999999999965  456788999988643   2345678899999999999888     88888775 456789999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC-----
Q 024661          174 KL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF-----  247 (264)
Q Consensus       174 ~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~-----  247 (264)
                      |+ +++|.+++....  .+++..+..++.|++.||+|||++||+|+||||+||+++.++.++|+|||++......     
T Consensus        76 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~  153 (257)
T cd05116          76 LAELGPLNKFLQKNK--HVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK  153 (257)
T ss_pred             cCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence            99 889999997654  6899999999999999999999999999999999999999999999999998754321     


Q ss_pred             ----cccceeeeeceeEe
Q 024661          248 ----SFQTFLSMASRVYI  261 (264)
Q Consensus       248 ----~~~~~~y~ape~~~  261 (264)
                          ..++..|||||.+.
T Consensus       154 ~~~~~~~~~~y~aPE~~~  171 (257)
T cd05116         154 AKTHGKWPVKWYAPECMN  171 (257)
T ss_pred             ecCCCCCCccccCHhHhc
Confidence                12246799999753

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.95  E-value=1.6e-27  Score=196.90  Aligned_cols=161  Identities=29%  Similarity=0.449  Sum_probs=136.4

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHh-ccCCCCcceEEEceeeeeC--CEE
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYR--NHI  168 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~~--~~~  168 (264)
                      |++.++||+|+||.||+|.+..++..+|+|.+++..  .......+|+.+++++. |+|+     +++++++.+.  +.+
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i-----~~~~~~~~~~~~~~~   75 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNI-----LRLIEVLFDRKTGRL   75 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCc-----cceEEEEecCCCCcE
Confidence            678899999999999999999999999999887432  22233456888888885 7777     9999999887  899


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC--
Q 024661          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA--  246 (264)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~--  246 (264)
                      ++||||+.++|.+++.... ..+++..++.++.|++.||.|||+.|++|+||+|+||+++. +.++|+|||++.....  
T Consensus        76 ~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~  153 (282)
T cd07831          76 ALVFELMDMNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP  153 (282)
T ss_pred             EEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence            9999999889999887643 36899999999999999999999999999999999999999 9999999999975432  


Q ss_pred             ---CcccceeeeeceeEe
Q 024661          247 ---FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~  261 (264)
                         ...++..|+|||.+.
T Consensus       154 ~~~~~~~~~~y~aPE~~~  171 (282)
T cd07831         154 PYTEYISTRWYRAPECLL  171 (282)
T ss_pred             CcCCCCCCcccCChhHhh
Confidence               223677899999753

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.95  E-value=1.3e-27  Score=194.72  Aligned_cols=161  Identities=21%  Similarity=0.288  Sum_probs=137.0

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      ++|++.+.||+|+||.||++..  +++.+++|.+... ...+.+.+|+.+++.++|+++     +++++++..+ ..+++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~-~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~-~~~~v   76 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCD-VTAQAFLEETAVMTKLHHKNL-----VRLLGVILHN-GLYIV   76 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc--CCCceEEEeecCc-chHHHHHHHHHHHHhCCCCCc-----CeEEEEEcCC-CcEEE
Confidence            5699999999999999999864  5778999988643 334678889999999999888     8888888654 47999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---C
Q 024661          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---F  247 (264)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---~  247 (264)
                      |||+ +++|.+++.......+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++.....   .
T Consensus        77 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~  156 (254)
T cd05083          77 MELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDN  156 (254)
T ss_pred             EECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccCCC
Confidence            9999 89999999876545689999999999999999999999999999999999999999999999999875432   2


Q ss_pred             cccceeeeeceeEe
Q 024661          248 SFQTFLSMASRVYI  261 (264)
Q Consensus       248 ~~~~~~y~ape~~~  261 (264)
                      ...+..|++||.+.
T Consensus       157 ~~~~~~y~~pe~~~  170 (254)
T cd05083         157 SKLPVKWTAPEALK  170 (254)
T ss_pred             CCCCceecCHHHhc
Confidence            23456799999764

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.95  E-value=4.4e-28  Score=214.81  Aligned_cols=165  Identities=22%  Similarity=0.355  Sum_probs=142.1

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCC-----CCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeee
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~  163 (264)
                      ..+-++.++||+|.||+||+|+...     ....||||.++..  .+..++|++|++++..++|+||     |++++.+.
T Consensus       485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nI-----VrLlGVC~  559 (774)
T KOG1026|consen  485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNI-----VRLLGVCR  559 (774)
T ss_pred             hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCe-----EEEEEEEc
Confidence            3457778999999999999998643     3456999999854  3468899999999999999999     99999999


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhcC--------CCC----CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKNS--------YRS----FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA  230 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~--------~~~----~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~  230 (264)
                      .++.+|+|+||| .|||.++|....        +..    ++..+.+.|+.||+.||+||-++.+|||||..+|+||+++
T Consensus       560 ~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~  639 (774)
T KOG1026|consen  560 EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN  639 (774)
T ss_pred             cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc
Confidence            999999999999 999999998431        223    8899999999999999999999999999999999999999


Q ss_pred             CcEEeccCCCCCcCCCCcc--------cceeeeeceeE
Q 024661          231 EYVKVPDYKVPSPRHAFSF--------QTFLSMASRVY  260 (264)
Q Consensus       231 ~~v~l~Dfg~a~~~~~~~~--------~~~~y~ape~~  260 (264)
                      -.|||+|||+++..-..++        -...||+||.+
T Consensus       640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsI  677 (774)
T KOG1026|consen  640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESI  677 (774)
T ss_pred             eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHh
Confidence            9999999999997544332        12359999965

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.95  E-value=1.5e-27  Score=194.50  Aligned_cols=164  Identities=23%  Similarity=0.345  Sum_probs=143.1

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      +|.+.+.||.|+||.||+|.+..++..+++|.+...   ....+.+.+|+.+++.++|+|+     +++++.+.+....|
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i-----~~~~~~~~~~~~~~   75 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNI-----VTFFASFQENGRLF   75 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCCh-----hhhhheeccCCeEE
Confidence            589999999999999999999999999999998753   2345677889999999999888     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC-cEEeccCCCCCcCCCC
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE-YVKVPDYKVPSPRHAF  247 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~-~v~l~Dfg~a~~~~~~  247 (264)
                      +++||+ +++|.+++.......+++..+..++.|++.||.|||+++++|+||+|+||++++++ .++|+|||.+......
T Consensus        76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~  155 (257)
T cd08225          76 IVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS  155 (257)
T ss_pred             EEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence            999999 89999999876545689999999999999999999999999999999999999886 5699999998764332


Q ss_pred             ------cccceeeeeceeEe
Q 024661          248 ------SFQTFLSMASRVYI  261 (264)
Q Consensus       248 ------~~~~~~y~ape~~~  261 (264)
                            ..++..|+|||.+.
T Consensus       156 ~~~~~~~~~~~~~~ape~~~  175 (257)
T cd08225         156 MELAYTCVGTPYYLSPEICQ  175 (257)
T ss_pred             cccccccCCCccccCHHHHc
Confidence                  24677899999753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=4.5e-28  Score=200.63  Aligned_cols=167  Identities=22%  Similarity=0.276  Sum_probs=140.1

Q ss_pred             eEEeeCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHH--HhccCCCCcceEEEc
Q 024661           82 YVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR--LARHDIGGTRCVQIR  159 (264)
Q Consensus        82 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~--l~~~~~~~~~~~~~~  159 (264)
                      .++.....+.....+.+.||+|.||.||+|.++  |+.||||++...+  ...+.+|.++.+.  ++|.||     ..|+
T Consensus       201 lplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srd--E~SWfrEtEIYqTvmLRHENI-----LgFI  271 (513)
T KOG2052|consen  201 LPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRD--ERSWFRETEIYQTVMLRHENI-----LGFI  271 (513)
T ss_pred             chhHhHHhhhheeEEEEEecCccccceeecccc--CCceEEEEecccc--hhhhhhHHHHHHHHHhccchh-----hhhh
Confidence            445666777888999999999999999999988  7789999997543  3567777777776  678887     7776


Q ss_pred             eeeeeC----CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeecCCCCCCEE
Q 024661          160 NWFDYR----NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL--------RLIHTDLKPENIL  226 (264)
Q Consensus       160 ~~~~~~----~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~ivH~dikp~Nil  226 (264)
                      +.=..+    ..+|||++|- .|+|+|||...   .++......++..++.||+|||..        .|.|||||..|||
T Consensus       272 aaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNIL  348 (513)
T KOG2052|consen  272 AADNKDNGSWTQLWLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL  348 (513)
T ss_pred             hccccCCCceEEEEEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEE
Confidence            653222    3689999999 99999999985   589999999999999999999974        4999999999999


Q ss_pred             eecCCcEEeccCCCCCcC----------CCCcccceeeeeceeE
Q 024661          227 LVSAEYVKVPDYKVPSPR----------HAFSFQTFLSMASRVY  260 (264)
Q Consensus       227 i~~~~~v~l~Dfg~a~~~----------~~~~~~~~~y~ape~~  260 (264)
                      +.+++.+.|+|+|+|...          .....||..|||||++
T Consensus       349 VKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvL  392 (513)
T KOG2052|consen  349 VKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVL  392 (513)
T ss_pred             EccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHh
Confidence            999999999999999653          2344799999999986

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.95  E-value=3.6e-27  Score=195.67  Aligned_cols=166  Identities=23%  Similarity=0.306  Sum_probs=141.5

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee--CCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--RNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~--~~~  167 (264)
                      ++|+..+.||.|++|.||+|.+..+++.+++|.+....  .....+.+|+++++.++|+|+     +.+++++.+  .+.
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~~~   75 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYI-----VKYYGAFLDESSSS   75 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCe-----eeeeeEEEccCCCe
Confidence            46899999999999999999999999999999987432  345678899999999999888     999988865  347


Q ss_pred             EEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          168 ICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      +|+||||+ +++|.+++...  ....+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++...
T Consensus        76 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~  155 (287)
T cd06621          76 IGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGEL  155 (287)
T ss_pred             EEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccc
Confidence            89999999 89999887632  2346899999999999999999999999999999999999999999999999998653


Q ss_pred             CC----CcccceeeeeceeEee
Q 024661          245 HA----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       245 ~~----~~~~~~~y~ape~~~~  262 (264)
                      ..    ...++..|++||.+.+
T Consensus       156 ~~~~~~~~~~~~~y~~pE~~~~  177 (287)
T cd06621         156 VNSLAGTFTGTSFYMAPERIQG  177 (287)
T ss_pred             cccccccccCCccccCHHHhcC
Confidence            32    2246778999997653

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.95  E-value=5.9e-29  Score=207.15  Aligned_cols=161  Identities=21%  Similarity=0.249  Sum_probs=133.4

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC----E
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN----H  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~----~  167 (264)
                      ...++.+.||+|.||.||+|+..  ++.||||++..  ...+.+..|-++.+-.   +..|++|++|++.-....    .
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~--~~kqs~~~Ek~Iy~lp---~m~h~nIl~Fi~~ekr~t~~~~e  282 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPE--QEKQSFQNEKNIYSLP---GMKHENILQFIGAEKRGTADRME  282 (534)
T ss_pred             CchhhHHHhhcCccceeehhhcc--CceeEEEecCH--HHHHHHHhHHHHHhcc---CccchhHHHhhchhccCCccccc
Confidence            44777899999999999999876  58899999874  4446677777666542   333344499988765544    8


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCeecCCCCCCEEeecCCcEEecc
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL---------RLIHTDLKPENILLVSAEYVKVPD  237 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---------~ivH~dikp~Nili~~~~~v~l~D  237 (264)
                      ++||++|. .|+|.+||..+   .+++....+++..++.||+|||+.         .|+|||||.+|||+.+|++..|+|
T Consensus       283 ywLVt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaD  359 (534)
T KOG3653|consen  283 YWLVTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIAD  359 (534)
T ss_pred             eeEEeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeec
Confidence            99999999 99999999987   499999999999999999999974         599999999999999999999999


Q ss_pred             CCCCCcCCC--------CcccceeeeeceeEee
Q 024661          238 YKVPSPRHA--------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       238 fg~a~~~~~--------~~~~~~~y~ape~~~~  262 (264)
                      ||+|.....        ...||..|||||++-+
T Consensus       360 FGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEg  392 (534)
T KOG3653|consen  360 FGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEG  392 (534)
T ss_pred             cceeEEecCCCCCcchhhhhhhhhhcCHHHHhh
Confidence            999976432        2468999999998754

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.95  E-value=1.6e-27  Score=197.15  Aligned_cols=164  Identities=23%  Similarity=0.383  Sum_probs=139.8

Q ss_pred             CCeEEEeecccCccEEEEEEEeC----CCCcEEEEEEEechhh--hHHHHHHHHHHHHHHhccCCCCcceEEEceeeee-
Q 024661           92 PRYRILSKMGEGTFGQVVECFDN----EKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-  164 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~-  164 (264)
                      +.|++.+.||+|+||.||+|...    .+++.+|+|++.....  ..+.+.+|+++++.+.|+++     +++++++.. 
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i-----~~~~~~~~~~   78 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENI-----VKYKGVCEKP   78 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCCh-----heEEeeeecC
Confidence            45888899999999999999864    3478899999875444  46788999999999999888     899888877 


Q ss_pred             -CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          165 -RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       165 -~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                       ....+++|||+ +++|.+++.... ..+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||++.
T Consensus        79 ~~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~  157 (284)
T cd05038          79 GGRSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAK  157 (284)
T ss_pred             CCCceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccc
Confidence             66899999999 899999998654 358999999999999999999999999999999999999999999999999998


Q ss_pred             cCCCC---------cccceeeeeceeEe
Q 024661          243 PRHAF---------SFQTFLSMASRVYI  261 (264)
Q Consensus       243 ~~~~~---------~~~~~~y~ape~~~  261 (264)
                      .....         ...+..|++||.+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~  185 (284)
T cd05038         158 VLPEDKDYYYVKEPGESPIFWYAPECLR  185 (284)
T ss_pred             ccccCCcceeccCCCCCcccccCcHHHc
Confidence            65421         12345699999653

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.95  E-value=2.3e-28  Score=222.79  Aligned_cols=168  Identities=27%  Similarity=0.346  Sum_probs=134.7

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee--
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--  164 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~--  164 (264)
                      +...+|+.++.||+|+||.||+++.+-+|+.||||.|...  .+....+.+|+.++.+|+|+|+     |+++..|..  
T Consensus       476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNV-----VRYysAWVEs~  550 (1351)
T KOG1035|consen  476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNV-----VRYYSAWVEST  550 (1351)
T ss_pred             hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcce-----eeeehhhhccC
Confidence            4456688899999999999999999999999999998754  4555678899999999999987     433332200  


Q ss_pred             --------------------------------------------------------------------------------
Q 024661          165 --------------------------------------------------------------------------------  164 (264)
Q Consensus       165 --------------------------------------------------------------------------------  164 (264)
                                                                                                      
T Consensus       551 ~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~  630 (1351)
T KOG1035|consen  551 AELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNL  630 (1351)
T ss_pred             CccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccc
Confidence                                                                                            


Q ss_pred             -----------------------------C--------CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Q 024661          165 -----------------------------R--------NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES  206 (264)
Q Consensus       165 -----------------------------~--------~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~  206 (264)
                                                   +        ..+||-|||| ...|.+++..+. ..-....+|++++||++|
T Consensus       631 S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~-~~~~~d~~wrLFreIlEG  709 (1351)
T KOG1035|consen  631 SNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNH-FNSQRDEAWRLFREILEG  709 (1351)
T ss_pred             ccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcc-cchhhHHHHHHHHHHHHH
Confidence                                         0        2379999999 555555555543 211467899999999999


Q ss_pred             HHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC------------------------CCCcccceeeeeceeEee
Q 024661          207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR------------------------HAFSFQTFLSMASRVYIC  262 (264)
Q Consensus       207 l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~------------------------~~~~~~~~~y~ape~~~~  262 (264)
                      |.|+|++|||||||||.||++++++.|||+|||+|+..                        .....||..|+|||++-.
T Consensus       710 LaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~  789 (1351)
T KOG1035|consen  710 LAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSD  789 (1351)
T ss_pred             HHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcc
Confidence            99999999999999999999999999999999999761                        112358999999998643

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.95  E-value=1.7e-27  Score=196.48  Aligned_cols=158  Identities=16%  Similarity=0.194  Sum_probs=129.5

Q ss_pred             ecccCccEEEEEEEeCCC------------------------CcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCc
Q 024661           99 KMGEGTFGQVVECFDNEK------------------------KELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGT  153 (264)
Q Consensus        99 ~lg~G~~g~V~~~~~~~~------------------------~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~  153 (264)
                      .||+|+||.||+|....+                        ...|++|++.... .....+.+|+.+++.+.|+|+   
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~ni---   78 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHL---   78 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCe---
Confidence            699999999999974321                        2358888886432 334567788899999998888   


Q ss_pred             ceEEEceeeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC-
Q 024661          154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE-  231 (264)
Q Consensus       154 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~-  231 (264)
                        +++++++......|+||||+ +++|..++.... ..+++..+..++.||+.||+|||++||+||||||+|||++..+ 
T Consensus        79 --v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~  155 (274)
T cd05076          79 --AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEK-GRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGL  155 (274)
T ss_pred             --eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCc
Confidence              99999999999999999999 899998887543 3689999999999999999999999999999999999998654 


Q ss_pred             ------cEEeccCCCCCcCC--CCcccceeeeeceeEee
Q 024661          232 ------YVKVPDYKVPSPRH--AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       232 ------~v~l~Dfg~a~~~~--~~~~~~~~y~ape~~~~  262 (264)
                            .++++|||++....  ....++..|+|||.+.+
T Consensus       156 ~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~  194 (274)
T cd05076         156 AEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPG  194 (274)
T ss_pred             ccCccceeeecCCccccccccccccccCCcccCchhhcC
Confidence                  48999999875432  23346778999998753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.95  E-value=3.4e-27  Score=193.82  Aligned_cols=162  Identities=24%  Similarity=0.308  Sum_probs=138.0

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      +.....||+|+||.||+|.+..++..+++|.+... ....+.+.+|+.+++.++|+|+     +++++++...+..++++
T Consensus        10 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~~~lv~   84 (268)
T cd06624          10 NGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNI-----VQYLGSDSENGFFKIFM   84 (268)
T ss_pred             CCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCe-----eeeeeeeccCCEEEEEE
Confidence            33345899999999999999999999999988643 3445678899999999999887     99999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCC--CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec-CCcEEeccCCCCCcCCC--
Q 024661          173 EKL-GPSLYDFLRKNSYRSF--PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS-AEYVKVPDYKVPSPRHA--  246 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~--~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~-~~~v~l~Dfg~a~~~~~--  246 (264)
                      ||+ +++|.+++.... ..+  ++..+..++.||+.||.|||++||+|+||||+||+++. ++.++|+|||++.....  
T Consensus        85 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~  163 (268)
T cd06624          85 EQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN  163 (268)
T ss_pred             ecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCC
Confidence            999 899999998642 234  78889999999999999999999999999999999986 67999999999865422  


Q ss_pred             ----CcccceeeeeceeEe
Q 024661          247 ----FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ----~~~~~~~y~ape~~~  261 (264)
                          ...++..|+|||++.
T Consensus       164 ~~~~~~~~~~~~~aPE~~~  182 (268)
T cd06624         164 PCTETFTGTLQYMAPEVID  182 (268)
T ss_pred             CccccCCCCccccChhhhc
Confidence                223677899999864

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.95  E-value=2.4e-27  Score=194.96  Aligned_cols=163  Identities=16%  Similarity=0.195  Sum_probs=134.2

Q ss_pred             eEEEeecccCccEEEEEEEeCCC---CcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC-
Q 024661           94 YRILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN-  166 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~-  166 (264)
                      |++.+.||+|+||.||+|....+   +..+|+|.++..   ......+.+|++.++.++|+++     +++++.+.... 
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~   75 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNV-----MKLIGVCFEASS   75 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCe-----eeEEeeeccCCc
Confidence            56789999999999999987643   478999998743   2334678899999999999888     89888775544 


Q ss_pred             -----EEEEEEecC-CCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEec
Q 024661          167 -----HICIVFEKL-GPSLYDFLRKNS----YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  236 (264)
Q Consensus       167 -----~~~lv~e~~-~~~L~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~  236 (264)
                           ..+++|||+ +++|..++....    ...+++..+..++.|++.||.|||+++++|+||||+||++++++.+||+
T Consensus        76 ~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~  155 (273)
T cd05035          76 LQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVA  155 (273)
T ss_pred             cccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEEC
Confidence                 389999999 999999986431    2358999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcCCCC--------cccceeeeeceeEe
Q 024661          237 DYKVPSPRHAF--------SFQTFLSMASRVYI  261 (264)
Q Consensus       237 Dfg~a~~~~~~--------~~~~~~y~ape~~~  261 (264)
                      |||+++.....        ...+..|++||.+.
T Consensus       156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~  188 (273)
T cd05035         156 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLA  188 (273)
T ss_pred             CccceeeccccccccccccccCCccccCHhhcc
Confidence            99998753321        12345799999764

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.95  E-value=2.5e-27  Score=193.63  Aligned_cols=156  Identities=25%  Similarity=0.376  Sum_probs=129.5

Q ss_pred             ecccCccEEEEEEEeC--CCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEec
Q 024661           99 KMGEGTFGQVVECFDN--EKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEK  174 (264)
Q Consensus        99 ~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  174 (264)
                      .||+|+||.||+|.+.  ..+..+|+|++....  ...+.+.+|+.+++.++|+++     +++++++. ....++||||
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----i~~~~~~~-~~~~~lv~e~   75 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYI-----VRMIGVCE-AEALMLVMEM   75 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCe-----EEEEEEEc-CCCeEEEEEe
Confidence            4899999999999775  345679999886432  334678899999999999887     99998875 4578999999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC------
Q 024661          175 L-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF------  247 (264)
Q Consensus       175 ~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~------  247 (264)
                      + +++|.+++.... ..+++..++.++.|++.||.|||++|++|+||||+|||++.++.++|+|||++......      
T Consensus        76 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  154 (257)
T cd05115          76 ASGGPLNKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA  154 (257)
T ss_pred             CCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceec
Confidence            9 899999987543 36899999999999999999999999999999999999999999999999998743221      


Q ss_pred             ---cccceeeeeceeEe
Q 024661          248 ---SFQTFLSMASRVYI  261 (264)
Q Consensus       248 ---~~~~~~y~ape~~~  261 (264)
                         ..++..|+|||.+.
T Consensus       155 ~~~~~~~~~y~aPE~~~  171 (257)
T cd05115         155 RSAGKWPLKWYAPECIN  171 (257)
T ss_pred             cCCCCCCcccCCHHHHc
Confidence               11245799999753

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.95  E-value=2.6e-27  Score=193.34  Aligned_cols=156  Identities=24%  Similarity=0.333  Sum_probs=131.8

Q ss_pred             eecccCccEEEEEEEeCCCC---cEEEEEEEechhh--hHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           98 SKMGEGTFGQVVECFDNEKK---ELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~---~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      ++||+|+||.||+|.+..++   ..+++|.+.....  ..+.+.+|+.+++.+.|+++     +++++++. .+..++||
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~-~~~~~~v~   74 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCI-----VRLIGVCK-GEPLMLVM   74 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCe-----eeEEEEEc-CCceEEEE
Confidence            47999999999999876554   7899999875443  55678889999999998887     99988776 45689999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCCc---
Q 024661          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS---  248 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~~---  248 (264)
                      ||+ +++|.+++....  .+++..+..++.|++.||+|||+++++|+||||+|||++.++.++|+|||+++......   
T Consensus        75 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~  152 (257)
T cd05060          75 ELAPLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY  152 (257)
T ss_pred             EeCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCccc
Confidence            999 899999998765  78999999999999999999999999999999999999999999999999987542211   


Q ss_pred             ------ccceeeeeceeEe
Q 024661          249 ------FQTFLSMASRVYI  261 (264)
Q Consensus       249 ------~~~~~y~ape~~~  261 (264)
                            .++..|++||.+.
T Consensus       153 ~~~~~~~~~~~y~aPE~~~  171 (257)
T cd05060         153 RATTAGRWPLKWYAPECIN  171 (257)
T ss_pred             ccccCccccccccCHHHhc
Confidence                  1234699999754

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.95  E-value=6.5e-28  Score=197.55  Aligned_cols=164  Identities=24%  Similarity=0.375  Sum_probs=144.2

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      ++|++.+.||.|++|.||+|.+..+++.+++|.+...  ......+.+|+++++.+.|+++     +.+++.+...+.++
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~~~   75 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYI-----VGFYGAFYNNGDIS   75 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCch-----hhhheeeecCCEEE
Confidence            3588889999999999999999999999999988754  3445678889999999998888     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-  246 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-  246 (264)
                      +++|++ +++|.+++.... ..+++..+..++.|++.||+|||+ .|++|+||+|+||+++.++.++|+|||.+..... 
T Consensus        76 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~  154 (265)
T cd06605          76 ICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS  154 (265)
T ss_pred             EEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence            999999 799999998763 478999999999999999999999 9999999999999999999999999999865422 


Q ss_pred             ---CcccceeeeeceeEe
Q 024661          247 ---FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~  261 (264)
                         ...++..|++||.+.
T Consensus       155 ~~~~~~~~~~y~~PE~~~  172 (265)
T cd06605         155 LAKTFVGTSSYMAPERIQ  172 (265)
T ss_pred             HhhcccCChhccCHHHHc
Confidence               245777899999753

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.95  E-value=2.5e-27  Score=200.69  Aligned_cols=162  Identities=21%  Similarity=0.344  Sum_probs=136.3

Q ss_pred             CeEEEeecccCccEEEEEEEeCCC--CcEEEEEEEech---hhhHHHHHHHHHHHHHHh-ccCCCCcceEEEceeee---
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEK--KELVAIKIVRSI---NKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFD---  163 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~--~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~---  163 (264)
                      +|++.+.||+|+||.||++.+..+  +..+|+|.+...   ....+.+.+|+.+++.+. |+|+     +++++.+.   
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----v~~~~~~~~~~   75 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNI-----TCLYDMDIVFP   75 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCCh-----heeeeeeeecc
Confidence            488999999999999999999888  889999988642   223456788999999984 7777     88877543   


Q ss_pred             -eCCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          164 -YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       164 -~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                       ....+|+++|+++++|.+++....  .+++..++.++.||+.||+|||++|++|+||||+|||++.++.++|+|||++.
T Consensus        76 ~~~~~~~~~~e~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~  153 (332)
T cd07857          76 GNFNELYLYEELMEADLHQIIRSGQ--PLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLAR  153 (332)
T ss_pred             ccCCcEEEEEecccCCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence             235689999999889999997654  78999999999999999999999999999999999999999999999999987


Q ss_pred             cCCC----------CcccceeeeeceeEe
Q 024661          243 PRHA----------FSFQTFLSMASRVYI  261 (264)
Q Consensus       243 ~~~~----------~~~~~~~y~ape~~~  261 (264)
                      ....          ...++..|+|||.+.
T Consensus       154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~  182 (332)
T cd07857         154 GFSENPGENAGFMTEYVATRWYRAPEIML  182 (332)
T ss_pred             ecccccccccccccCcccCccccCcHHHh
Confidence            5321          224778899999764

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.95  E-value=2.3e-27  Score=195.15  Aligned_cols=163  Identities=17%  Similarity=0.213  Sum_probs=132.8

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCc--EEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee----
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKE--LVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY----  164 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~----  164 (264)
                      |.+.+.||+|+||.||+|.+..++.  .+|+|.++..   ....+.+.+|+.+++.++|+|+     +++++.+..    
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~   75 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNV-----MRLIGVCLQTVES   75 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEccCCcc
Confidence            3567899999999999999877765  5899987642   3445678889999999999988     888876532    


Q ss_pred             --CCEEEEEEecC-CCCHHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEecc
Q 024661          165 --RNHICIVFEKL-GPSLYDFLRKN----SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  237 (264)
Q Consensus       165 --~~~~~lv~e~~-~~~L~~~l~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~D  237 (264)
                        ....+++|||+ +++|.+++...    ....+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|
T Consensus        76 ~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~D  155 (272)
T cd05075          76 EGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVAD  155 (272)
T ss_pred             cCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECC
Confidence              23579999999 89999987532    223588999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcCCCC--------cccceeeeeceeEe
Q 024661          238 YKVPSPRHAF--------SFQTFLSMASRVYI  261 (264)
Q Consensus       238 fg~a~~~~~~--------~~~~~~y~ape~~~  261 (264)
                      ||++......        ...+..|++||.+.
T Consensus       156 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~  187 (272)
T cd05075         156 FGLSKKIYNGDYYRQGRIAKMPVKWIAIESLA  187 (272)
T ss_pred             CCcccccCcccceecCCcccCCcccCCHHHcc
Confidence            9998764321        12455799999764

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.95  E-value=2.9e-27  Score=193.79  Aligned_cols=158  Identities=18%  Similarity=0.208  Sum_probs=130.4

Q ss_pred             eecccCccEEEEEEEeCCC------------CcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           98 SKMGEGTFGQVVECFDNEK------------KELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~------------~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      +.||+|+||.||+|.....            ...+++|++.... .....+.+|+.+++.+.|+|+     +++++++..
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~i-----v~~~~~~~~   75 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHI-----VLLYGVCVR   75 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCE-----eeEEEEEec
Confidence            4689999999999985322            2358888876432 334577888899999999888     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCc-------EEec
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY-------VKVP  236 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~-------v~l~  236 (264)
                      +...+++|||+ +++|..++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.       ++++
T Consensus        76 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~  154 (262)
T cd05077          76 DVENIMVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLS  154 (262)
T ss_pred             CCCCEEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeC
Confidence            99999999999 888888877543 36899999999999999999999999999999999999987664       8999


Q ss_pred             cCCCCCcCCC--CcccceeeeeceeEe
Q 024661          237 DYKVPSPRHA--FSFQTFLSMASRVYI  261 (264)
Q Consensus       237 Dfg~a~~~~~--~~~~~~~y~ape~~~  261 (264)
                      |||++.....  ...++..|||||.+.
T Consensus       155 d~g~~~~~~~~~~~~~~~~y~aPE~~~  181 (262)
T cd05077         155 DPGIPITVLSRQECVERIPWIAPECVE  181 (262)
T ss_pred             CCCCCccccCcccccccccccChhhhc
Confidence            9999875433  334677899999764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.95  E-value=3.6e-27  Score=192.81  Aligned_cols=165  Identities=22%  Similarity=0.313  Sum_probs=141.6

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee--CCE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--RNH  167 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~--~~~  167 (264)
                      +|++.+.||.|+||.||+|.+..++..+++|.+...   ....+.+..|+++++.+.|+++     +++++.+..  ...
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~   75 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNI-----VRYYDRIIDRSNQT   75 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCcc-----ceeeeeeecCCCCE
Confidence            488999999999999999999999999999988632   3445678889999999999888     898887754  567


Q ss_pred             EEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHH-----HCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMH-----ELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH-----~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                      .|++|||+ +++|.+++...  ....+++..++.++.||+.||.|||     +.+++|+||+|+||+++.++.++|+|||
T Consensus        76 ~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g  155 (265)
T cd08217          76 LYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFG  155 (265)
T ss_pred             EEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccc
Confidence            89999999 89999999753  2346899999999999999999999     8999999999999999999999999999


Q ss_pred             CCCcCCCC------cccceeeeeceeEee
Q 024661          240 VPSPRHAF------SFQTFLSMASRVYIC  262 (264)
Q Consensus       240 ~a~~~~~~------~~~~~~y~ape~~~~  262 (264)
                      ++......      ..++..|++||.+..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~pE~~~~  184 (265)
T cd08217         156 LAKILGHDSSFAKTYVGTPYYMSPEQLNH  184 (265)
T ss_pred             ccccccCCcccccccccCCCccChhhhcC
Confidence            98865432      246778999998643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.95  E-value=4.9e-27  Score=191.11  Aligned_cols=164  Identities=26%  Similarity=0.469  Sum_probs=144.6

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      +|++.+.||.|+||.||++.+..++..+++|++...   ......+.+|+++++.++|+++     +.+.+.+...+..+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~-----~~~~~~~~~~~~~~   75 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNI-----IKYYESFEEKGKLC   75 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCCh-----hheEEEEecCCEEE
Confidence            589999999999999999999999999999998743   2456678889999999998887     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          170 IVFEKL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      +++|++ +++|.+++....  ...+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.....
T Consensus        76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~  155 (258)
T cd08215          76 IVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSS  155 (258)
T ss_pred             EEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeeccc
Confidence            999999 889999998642  34799999999999999999999999999999999999999999999999999876433


Q ss_pred             C------cccceeeeeceeEe
Q 024661          247 F------SFQTFLSMASRVYI  261 (264)
Q Consensus       247 ~------~~~~~~y~ape~~~  261 (264)
                      .      ..++..|++||.+.
T Consensus       156 ~~~~~~~~~~~~~y~~pe~~~  176 (258)
T cd08215         156 TVDLAKTVVGTPYYLSPELCQ  176 (258)
T ss_pred             CcceecceeeeecccChhHhc
Confidence            2      34677899999753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=4.4e-27  Score=192.26  Aligned_cols=158  Identities=18%  Similarity=0.281  Sum_probs=130.3

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechhh----hHHHHHHHHHHH-HHHhccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVL-QRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l-~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      +.||.|+||.||+|.+..+++.+|+|++.+...    ....+..|..++ ....|+|+     +++++.+..++.+|++|
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i-----~~~~~~~~~~~~~~lv~   76 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYV-----AKLYYSFQSKDYLYLVM   76 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCe-----eeeeeeEEcCCeEEEEE
Confidence            579999999999999999999999999875321    112233343333 23355555     99999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC--CCcc
Q 024661          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH--AFSF  249 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~--~~~~  249 (264)
                      ||+ +++|.+++....  .+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++....  ....
T Consensus        77 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~  154 (260)
T cd05611          77 EYLNGGDCASLIKTLG--GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFV  154 (260)
T ss_pred             eccCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccccccCC
Confidence            999 999999998765  68999999999999999999999999999999999999999999999999987543  2334


Q ss_pred             cceeeeeceeEee
Q 024661          250 QTFLSMASRVYIC  262 (264)
Q Consensus       250 ~~~~y~ape~~~~  262 (264)
                      ++..|++||.+.+
T Consensus       155 ~~~~y~~pe~~~~  167 (260)
T cd05611         155 GTPDYLAPETILG  167 (260)
T ss_pred             CCcCccChhhhcC
Confidence            7788999998653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.95  E-value=3.3e-27  Score=194.22  Aligned_cols=159  Identities=21%  Similarity=0.315  Sum_probs=132.3

Q ss_pred             eecccCccEEEEEEEeCCCCc--EEEEEEEech--hhhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           98 SKMGEGTFGQVVECFDNEKKE--LVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~--~vaiK~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      +.||+|+||.||+|.+..++.  .+++|.++..  ....+.+.+|+++++++ .|+++     +++++++...+.+|++|
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----v~~~~~~~~~~~~~lv~   75 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI-----INLLGACEHRGYLYLAI   75 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCe-----eeEEEEEecCCCceEEE
Confidence            368999999999999987775  4688877632  34456788899999999 67777     99999999999999999


Q ss_pred             ecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEecc
Q 024661          173 EKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  237 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~D  237 (264)
                      ||+ +++|.+++....              ...+++..++.++.|++.||+|||++|++|+||||+||+++.++.++|+|
T Consensus        76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~d  155 (270)
T cd05047          76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIAD  155 (270)
T ss_pred             EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECC
Confidence            999 899999997532              12478899999999999999999999999999999999999999999999


Q ss_pred             CCCCCcCCCC-----cccceeeeeceeEe
Q 024661          238 YKVPSPRHAF-----SFQTFLSMASRVYI  261 (264)
Q Consensus       238 fg~a~~~~~~-----~~~~~~y~ape~~~  261 (264)
                      ||++......     ...+..|+|||++.
T Consensus       156 fgl~~~~~~~~~~~~~~~~~~y~apE~~~  184 (270)
T cd05047         156 FGLSRGQEVYVKKTMGRLPVRWMAIESLN  184 (270)
T ss_pred             CCCccccchhhhccCCCCccccCChHHHc
Confidence            9998643211     12345699999764

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.2e-28  Score=204.50  Aligned_cols=171  Identities=26%  Similarity=0.484  Sum_probs=147.4

Q ss_pred             EeeCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEec--------hhhhHHHHHHHHHHHHHHhccCCCCcce
Q 024661           84 FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--------INKYREAAMIEIDVLQRLARHDIGGTRC  155 (264)
Q Consensus        84 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--------~~~~~~~~~~e~~~l~~l~~~~~~~~~~  155 (264)
                      |.....+.++|.++..||+|+|+.||+|.+....+.||+|+-..        .....+...+|.++.+.|.|+.|     
T Consensus       455 FkDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRI-----  529 (775)
T KOG1151|consen  455 FKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRI-----  529 (775)
T ss_pred             hccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCccee-----
Confidence            44455777899999999999999999999999999999997542        22345667889999999999888     


Q ss_pred             EEEceeeee-CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--CCeecCCCCCCEEeecC-
Q 024661          156 VQIRNWFDY-RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL--RLIHTDLKPENILLVSA-  230 (264)
Q Consensus       156 ~~~~~~~~~-~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~ivH~dikp~Nili~~~-  230 (264)
                      |++|++|.- .+.+|-|+||| |.+|.-||+.++  -+++++++.|+.||+.||.||.+.  .|||=||||.|||+.++ 
T Consensus       530 VKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhk--lmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~Gt  607 (775)
T KOG1151|consen  530 VKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHK--LMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGT  607 (775)
T ss_pred             eeeeeeeeeccccceeeeeecCCCchhHHHHhhh--hhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCc
Confidence            999999965 57899999999 889999999887  799999999999999999999976  59999999999999865 


Q ss_pred             --CcEEeccCCCCCcCC-------------CCcccceeeeeceeEe
Q 024661          231 --EYVKVPDYKVPSPRH-------------AFSFQTFLSMASRVYI  261 (264)
Q Consensus       231 --~~v~l~Dfg~a~~~~-------------~~~~~~~~y~ape~~~  261 (264)
                        |.+||+|||++..-.             ....||++|+.||.|.
T Consensus       608 acGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFv  653 (775)
T KOG1151|consen  608 ACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFV  653 (775)
T ss_pred             ccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceee
Confidence              689999999997633             2346899999999875

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.95  E-value=3.5e-27  Score=193.87  Aligned_cols=159  Identities=22%  Similarity=0.242  Sum_probs=130.4

Q ss_pred             eecccCccEEEEEEEeCCC--CcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEe
Q 024661           98 SKMGEGTFGQVVECFDNEK--KELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE  173 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~--~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e  173 (264)
                      ++||+|+||.||+|.....  ...+++|.+...  ....+.+.+|+.+++.++|+|+     +++++.+.+....|+|||
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~i-----v~~~~~~~~~~~~~lv~e   75 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNI-----LQCLGQCVEAIPYLLVFE   75 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcch-----hheEEEecCCCccEEEEe
Confidence            3699999999999975433  334667766533  2345678899999999999888     999999999999999999


Q ss_pred             cC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC-----
Q 024661          174 KL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH-----  245 (264)
Q Consensus       174 ~~-~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~-----  245 (264)
                      |+ +++|.+++....  ....++..++.++.||+.||+|||+++++|+||||+|||++.++.++|+|||++....     
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~  155 (268)
T cd05086          76 YCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYI  155 (268)
T ss_pred             cCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhh
Confidence            99 899999998642  1246677888999999999999999999999999999999999999999999986421     


Q ss_pred             ---CCcccceeeeeceeEe
Q 024661          246 ---AFSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ---~~~~~~~~y~ape~~~  261 (264)
                         ....++..|+|||++.
T Consensus       156 ~~~~~~~~~~~y~aPE~~~  174 (268)
T cd05086         156 ETEDDKCVPLRWLAPELVG  174 (268)
T ss_pred             hcccCCcCcccccCchhcc
Confidence               1224667899999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.95  E-value=6.7e-28  Score=197.00  Aligned_cols=159  Identities=19%  Similarity=0.280  Sum_probs=133.8

Q ss_pred             eecccCccEEEEEEEeCCCCc-------EEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           98 SKMGEGTFGQVVECFDNEKKE-------LVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~-------~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      +.||+|+||.||+|.+...+.       .+++|.+.... ...+.+.+|+.+++.+.|+|+     +.+++++......+
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----v~~~~~~~~~~~~~   75 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHL-----VLNYGVCVCGDESI   75 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCCh-----hheeeEEEeCCCcE
Confidence            469999999999999865443       38888776433 345677889999999999888     99999999989999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCc--------EEeccCCC
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY--------VKVPDYKV  240 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~--------v~l~Dfg~  240 (264)
                      +||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+||+++.++.        ++++|||+
T Consensus        76 lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~  154 (258)
T cd05078          76 MVQEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGI  154 (258)
T ss_pred             EEEecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccc
Confidence            999999 899999998654 35899999999999999999999999999999999999987764        69999999


Q ss_pred             CCcCCC--CcccceeeeeceeEee
Q 024661          241 PSPRHA--FSFQTFLSMASRVYIC  262 (264)
Q Consensus       241 a~~~~~--~~~~~~~y~ape~~~~  262 (264)
                      +.....  ...++..|||||++..
T Consensus       155 ~~~~~~~~~~~~~~~y~aPE~~~~  178 (258)
T cd05078         155 SITVLPKEILLERIPWVPPECIEN  178 (258)
T ss_pred             ccccCCchhccccCCccCchhccC
Confidence            876443  2346778999998753

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.95  E-value=2.9e-27  Score=192.90  Aligned_cols=158  Identities=24%  Similarity=0.307  Sum_probs=134.8

Q ss_pred             eecccCccEEEEEEEeCC-CC--cEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           98 SKMGEGTFGQVVECFDNE-KK--ELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~-~~--~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      +.||+|++|.||+|.+.. .+  ..+++|.+....  ...+.+.+|+.++++++|+|+     +++++.+.+ ...+++|
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~-~~~~~v~   74 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENL-----IRLYGVVLT-HPLMMVT   74 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCc-----cceeEEEcC-CeEEEEE
Confidence            468999999999999865 33  368999987543  356788899999999999888     999999888 8999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-----
Q 024661          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-----  246 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-----  246 (264)
                      |++ +++|.+++.......+++..++.++.|++.||+|||++|++|+||+|+||+++.++.+||+|||++.....     
T Consensus        75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~  154 (257)
T cd05040          75 ELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY  154 (257)
T ss_pred             EecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccce
Confidence            999 89999999875434689999999999999999999999999999999999999999999999999876432     


Q ss_pred             ----CcccceeeeeceeEe
Q 024661          247 ----FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ----~~~~~~~y~ape~~~  261 (264)
                          ...++..|++||.+.
T Consensus       155 ~~~~~~~~~~~y~~pE~~~  173 (257)
T cd05040         155 VMEEHLKVPFAWCAPESLR  173 (257)
T ss_pred             ecccCCCCCceecCHHHhc
Confidence                223566899999754

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.95  E-value=2.1e-27  Score=197.11  Aligned_cols=166  Identities=19%  Similarity=0.307  Sum_probs=139.2

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCC-----CCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeee
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~  163 (264)
                      .++|++.+.||+|+||.||+|.+..     ++..+++|++...  ......+.+|+.+++.+.|+++     +++++++.
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i-----v~~~~~~~   78 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNI-----VKLLGVCA   78 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCch-----heEEEEEc
Confidence            3579999999999999999998753     5778999988743  2345668889999999999888     99999999


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhcC--------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKNS--------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKP  222 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~--------------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp  222 (264)
                      +....|++|||+ +++|.+++....                    ...+++..++.++.|++.||.|||+++++|+||||
T Consensus        79 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p  158 (288)
T cd05050          79 VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLAT  158 (288)
T ss_pred             CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccH
Confidence            999999999999 889999997432                    12367888999999999999999999999999999


Q ss_pred             CCEEeecCCcEEeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          223 ENILLVSAEYVKVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       223 ~Nili~~~~~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      +||+++.++.++|+|||++.....        ....+..|+|||.+.
T Consensus       159 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  205 (288)
T cd05050         159 RNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIF  205 (288)
T ss_pred             hheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHh
Confidence            999999999999999999875322        112345699999754

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.95  E-value=3.6e-27  Score=191.60  Aligned_cols=157  Identities=21%  Similarity=0.305  Sum_probs=133.4

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  175 (264)
                      +.||+|+||.||+|... ++..+++|.++..  ......+.+|+++++.+.|+|+     +.+++++...+..++||||+
T Consensus         1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~lv~e~~   74 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNI-----VKLIGVCTQRQPIYIVMELV   74 (250)
T ss_pred             CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCc-----CeEEEEEecCCccEEEEECC
Confidence            46899999999999854 6788999988643  2334568889999999999888     99999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCCc------
Q 024661          176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS------  248 (264)
Q Consensus       176 -~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~~------  248 (264)
                       +++|.+++.... ..+++..+..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||++.......      
T Consensus        75 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~  153 (250)
T cd05085          75 PGGDFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGL  153 (250)
T ss_pred             CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCC
Confidence             999999987654 358899999999999999999999999999999999999999999999999986533221      


Q ss_pred             -ccceeeeeceeEe
Q 024661          249 -FQTFLSMASRVYI  261 (264)
Q Consensus       249 -~~~~~y~ape~~~  261 (264)
                       ..+..|+|||++.
T Consensus       154 ~~~~~~y~aPE~~~  167 (250)
T cd05085         154 KQIPIKWTAPEALN  167 (250)
T ss_pred             CCCcccccCHHHhc
Confidence             2345699999764

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.95  E-value=4.2e-27  Score=195.13  Aligned_cols=163  Identities=24%  Similarity=0.326  Sum_probs=141.5

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      ..|...+.||.|++|.||++.+..+++.+++|.+.... ...+.+.+|+.+++.+.|+++     +++++++...+..|+
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~v-----v~~~~~~~~~~~~~~   93 (285)
T cd06648          19 SYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNI-----VEMYSSYLVGDELWV   93 (285)
T ss_pred             HhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCCh-----heEEEEEEcCCeEEE
Confidence            34666789999999999999999899999999886432 334567889999999998888     999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---  246 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---  246 (264)
                      ++||+ +++|.+++...   .+++..+..++.|++.||+|||++|++||||+|+||+++.++.++|+|||++.....   
T Consensus        94 v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~  170 (285)
T cd06648          94 VMEFLEGGALTDIVTHT---RMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP  170 (285)
T ss_pred             EEeccCCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc
Confidence            99999 89999998873   589999999999999999999999999999999999999999999999998764322   


Q ss_pred             ---CcccceeeeeceeEee
Q 024661          247 ---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~~  262 (264)
                         ...++..|++||.+.+
T Consensus       171 ~~~~~~~~~~y~aPE~~~~  189 (285)
T cd06648         171 RRKSLVGTPYWMAPEVISR  189 (285)
T ss_pred             ccccccCCccccCHHHhcC
Confidence               2347788999998653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.95  E-value=2e-27  Score=199.12  Aligned_cols=165  Identities=25%  Similarity=0.396  Sum_probs=138.5

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee---
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY---  164 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~---  164 (264)
                      .++|++.++||+|+||.||+|.+..+++.+++|.+....   .......+|+++++.++|+++     +++++.+..   
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~   81 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNV-----VPLIDMAVERPD   81 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCc-----cchhhheecccc
Confidence            578999999999999999999999999999999886432   223456789999999999988     888777643   


Q ss_pred             -----CCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          165 -----RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       165 -----~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                           ...+++||||+.++|.+.+.... ..+++..+..++.|+++||.|||++|++|+||||+||++++++.++|+|||
T Consensus        82 ~~~~~~~~~~lv~~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg  160 (311)
T cd07866          82 KSKRKRGSVYMVTPYMDHDLSGLLENPS-VKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFG  160 (311)
T ss_pred             cccccCceEEEEEecCCcCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCc
Confidence                 34579999999888888877543 469999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCCC-----------------cccceeeeeceeEe
Q 024661          240 VPSPRHAF-----------------SFQTFLSMASRVYI  261 (264)
Q Consensus       240 ~a~~~~~~-----------------~~~~~~y~ape~~~  261 (264)
                      ++......                 ..++..|+|||.+.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  199 (311)
T cd07866         161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLL  199 (311)
T ss_pred             cchhccCCCcccccCCcccccccccceeccCcCChHHhh
Confidence            98753221                 12456799999764

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=6e-30  Score=214.79  Aligned_cols=165  Identities=25%  Similarity=0.340  Sum_probs=147.4

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech----hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      ...+++++..||-|+||.|=++........+|+|++++.    ....+.+..|-.++..++.+.|     |++|..|.+.
T Consensus       418 ~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fI-----vrLYrTfrd~  492 (732)
T KOG0614|consen  418 KLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFI-----VRLYRTFRDS  492 (732)
T ss_pred             chhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHH-----HHHHHHhccc
Confidence            335577788999999999999988777667899988753    3566778889999999887766     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      .++|++||-| ||.|+..+++.+  .|++..++.|+..+++|++|||++|||+|||||+|++++.+|.+||.|||+|...
T Consensus       493 kyvYmLmEaClGGElWTiLrdRg--~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki  570 (732)
T KOG0614|consen  493 KYVYMLMEACLGGELWTILRDRG--SFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKI  570 (732)
T ss_pred             hhhhhhHHhhcCchhhhhhhhcC--CcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHh
Confidence            9999999999 999999999887  8999999999999999999999999999999999999999999999999999875


Q ss_pred             CC-----CcccceeeeeceeEe
Q 024661          245 HA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~~-----~~~~~~~y~ape~~~  261 (264)
                      ..     ..+||+.|.|||+++
T Consensus       571 ~~g~KTwTFcGTpEYVAPEIIL  592 (732)
T KOG0614|consen  571 GSGRKTWTFCGTPEYVAPEIIL  592 (732)
T ss_pred             ccCCceeeecCCcccccchhhh
Confidence            43     447999999999875

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.95  E-value=1.8e-27  Score=202.33  Aligned_cols=164  Identities=24%  Similarity=0.384  Sum_probs=137.8

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC---
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR---  165 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~---  165 (264)
                      +.++|.+.+.||.|+||.||+|.+..+++.|++|.+.... ...+.+.+|+++++.++|+++     +++++.+...   
T Consensus         3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i-----~~~~~~~~~~~~~   77 (342)
T cd07854           3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNI-----VKVYEVLGPSGSD   77 (342)
T ss_pred             cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcc-----hhhHhhhcccccc
Confidence            4578999999999999999999999999999999886433 344667889999999999988     7777665443   


Q ss_pred             -----------CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec-CCcE
Q 024661          166 -----------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS-AEYV  233 (264)
Q Consensus       166 -----------~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~-~~~v  233 (264)
                                 ...|+||||++++|.+++...   .+++..++.++.||+.||.|||++||+||||||+||+++. ++.+
T Consensus        78 ~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~  154 (342)
T cd07854          78 LTEDVGSLTELNSVYIVQEYMETDLANVLEQG---PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVL  154 (342)
T ss_pred             cccccccccccceEEEEeecccccHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceE
Confidence                       468999999988999888653   5899999999999999999999999999999999999985 5678


Q ss_pred             EeccCCCCCcCCC---------CcccceeeeeceeEe
Q 024661          234 KVPDYKVPSPRHA---------FSFQTFLSMASRVYI  261 (264)
Q Consensus       234 ~l~Dfg~a~~~~~---------~~~~~~~y~ape~~~  261 (264)
                      +|+|||++.....         ...++..|+|||.+.
T Consensus       155 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  191 (342)
T cd07854         155 KIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLL  191 (342)
T ss_pred             EECCcccceecCCccccccccccccccccccCHHHHh
Confidence            9999999865321         124577899999754

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.95  E-value=3.3e-27  Score=191.92  Aligned_cols=157  Identities=22%  Similarity=0.333  Sum_probs=135.2

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  175 (264)
                      ++||.|+||.||+|.+.. ++.+++|.+....  .....+.+|+++++.+.|+++     +.+++++.+....++|||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~~v~e~~   74 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNI-----VKLIGVCVQKQPIYIVMELV   74 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCe-----EEEEEEEecCCCeEEEEEcC
Confidence            479999999999999887 8999999887432  345678899999999999887     99999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC-------
Q 024661          176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF-------  247 (264)
Q Consensus       176 -~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~-------  247 (264)
                       +++|.+++.... ..+++..+..++.|++.+|.|||+++++|+||+|+||+++.++.++|+|||++......       
T Consensus        75 ~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~  153 (251)
T cd05041          75 PGGSLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDG  153 (251)
T ss_pred             CCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccc
Confidence             899999997643 36889999999999999999999999999999999999999999999999998754421       


Q ss_pred             -cccceeeeeceeEe
Q 024661          248 -SFQTFLSMASRVYI  261 (264)
Q Consensus       248 -~~~~~~y~ape~~~  261 (264)
                       ...+..|++||.+.
T Consensus       154 ~~~~~~~y~~PE~~~  168 (251)
T cd05041         154 LKQIPIKWTAPEALN  168 (251)
T ss_pred             cCcceeccCChHhhc
Confidence             12245699999764

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.95  E-value=4.8e-27  Score=194.74  Aligned_cols=167  Identities=26%  Similarity=0.369  Sum_probs=147.4

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ...+.|++...||.|++|.||+|.+..++..+++|++.......+.+.+|++.++.++|+|+     +++++.+...+..
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~   90 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNI-----VDYYDSYLVGDEL   90 (286)
T ss_pred             CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCe-----eEEEEEEEECCEE
Confidence            45567999999999999999999999889999999998654456678889999999999887     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-  246 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-  246 (264)
                      |+++||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++..... 
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  169 (286)
T cd06614          91 WVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKE  169 (286)
T ss_pred             EEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccc
Confidence            9999999 799999998764 4689999999999999999999999999999999999999999999999998765332 


Q ss_pred             -----CcccceeeeeceeEe
Q 024661          247 -----FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 -----~~~~~~~y~ape~~~  261 (264)
                           ...++..|++||.+.
T Consensus       170 ~~~~~~~~~~~~y~~PE~~~  189 (286)
T cd06614         170 KSKRNSVVGTPYWMAPEVIK  189 (286)
T ss_pred             hhhhccccCCcccCCHhHhc
Confidence                 223667899999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.95  E-value=2.9e-27  Score=196.94  Aligned_cols=173  Identities=19%  Similarity=0.238  Sum_probs=127.2

Q ss_pred             eeCCccCCCeEEEeecccCccEEEEEEEeCCC---CcEEEEEEEechhhh--HHH-------HHHHHHHHHHHhccCCCC
Q 024661           85 AIGENLTPRYRILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSINKY--REA-------AMIEIDVLQRLARHDIGG  152 (264)
Q Consensus        85 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~--~~~-------~~~e~~~l~~l~~~~~~~  152 (264)
                      .+.+...++|++.+.||+|+||.||+|.+..+   +..+++|+.......  .+.       ...++..+..  ..++.|
T Consensus         5 ~~~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~--~~~~~h   82 (294)
T PHA02882          5 PLIDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKN--IHNIDH   82 (294)
T ss_pred             eeeccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHH--hccCCC
Confidence            34556678899999999999999999998877   667777764322111  000       0111111111  223344


Q ss_pred             cceEEEceeeeeCC----EEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEee
Q 024661          153 TRCVQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV  228 (264)
Q Consensus       153 ~~~~~~~~~~~~~~----~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~  228 (264)
                      ++++.+++++....    ..++++|++..++.+.+....  ..++..++.++.|++.||+|||+++|+||||||+|||++
T Consensus        83 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~  160 (294)
T PHA02882         83 LGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRIK--CKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVD  160 (294)
T ss_pred             CCCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhhc--cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc
Confidence            55588887655432    568899999778888877643  467888999999999999999999999999999999999


Q ss_pred             cCCcEEeccCCCCCcCC-------------CCcccceeeeeceeEe
Q 024661          229 SAEYVKVPDYKVPSPRH-------------AFSFQTFLSMASRVYI  261 (264)
Q Consensus       229 ~~~~v~l~Dfg~a~~~~-------------~~~~~~~~y~ape~~~  261 (264)
                      .++.++|+|||+|+...             ....+|..|+|||++.
T Consensus       161 ~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~  206 (294)
T PHA02882        161 GNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHN  206 (294)
T ss_pred             CCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhC
Confidence            99999999999986531             1224889999999764

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.95  E-value=7e-27  Score=190.21  Aligned_cols=162  Identities=30%  Similarity=0.395  Sum_probs=145.1

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC--CE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR--NH  167 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~--~~  167 (264)
                      +|++.+.||+|++|.||+|.+..++..+++|++....   ...+.+.+|+.+++++.|+++     +.+++.+.+.  ..
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~   75 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNI-----VRYYGSERDEEKNT   75 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCE-----eeEEEEEecCCCCe
Confidence            4888999999999999999999999999999987544   456788899999999998887     9999999888  89


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      ++++||++ +++|.+++.+..  .+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+.....
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~  153 (260)
T cd06606          76 LNIFLEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGD  153 (260)
T ss_pred             EEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence            99999999 999999998765  799999999999999999999999999999999999999999999999999876433


Q ss_pred             C--------cccceeeeeceeEe
Q 024661          247 F--------SFQTFLSMASRVYI  261 (264)
Q Consensus       247 ~--------~~~~~~y~ape~~~  261 (264)
                      .        ..++..|++||.+.
T Consensus       154 ~~~~~~~~~~~~~~~y~~pE~~~  176 (260)
T cd06606         154 IETGEGTGSVRGTPYWMAPEVIR  176 (260)
T ss_pred             ccccccccCCCCCccccCHhhhc
Confidence            2        34677899999764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.95  E-value=5.1e-27  Score=192.95  Aligned_cols=164  Identities=23%  Similarity=0.281  Sum_probs=137.1

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCC---CcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .++|.+.+.||.|+||.||+|.+...   ...+++|.....  ....+.+.+|+.+++.+.|+|+     +++++++.+ 
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~-   78 (270)
T cd05056           5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHI-----VKLIGVITE-   78 (270)
T ss_pred             hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCch-----hceeEEEcC-
Confidence            35699999999999999999987544   346899987643  3455678899999999999888     999988875 


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      ...|+||||+ +++|.+++.... ..+++..++.++.|++.||+|||++|++|+||||+||+++.++.++|+|||++...
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~  157 (270)
T cd05056          79 NPVWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYL  157 (270)
T ss_pred             CCcEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeec
Confidence            5578999999 899999998654 35899999999999999999999999999999999999999999999999998754


Q ss_pred             CCC-------cccceeeeeceeEe
Q 024661          245 HAF-------SFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~~~-------~~~~~~y~ape~~~  261 (264)
                      ...       ......|+|||.+.
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~  181 (270)
T cd05056         158 EDESYYKASKGKLPIKWMAPESIN  181 (270)
T ss_pred             ccccceecCCCCccccccChhhhc
Confidence            322       12234699999753

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.95  E-value=9.1e-27  Score=192.85  Aligned_cols=163  Identities=31%  Similarity=0.475  Sum_probs=137.5

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHh---ccCCCCcceEEEceeeeeCCE
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLA---RHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~---~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      |++.+.||+|+||.||+|.+..++..+++|.++...   .....+.+|+.+++.+.   |+++     +++++++.+.+.
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i-----~~~~~~~~~~~~   75 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNI-----VRLLDVCHGPRT   75 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCc-----ceEEEEEeeccC
Confidence            678999999999999999999889999999987422   22345667888887774   6666     999999988776


Q ss_pred             -----EEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          168 -----ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       168 -----~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                           ++++||+++++|.+++.......+++..++.++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++.
T Consensus        76 ~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~  155 (287)
T cd07838          76 DRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLAR  155 (287)
T ss_pred             CCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcce
Confidence                 999999997799999887554468999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCC-----cccceeeeeceeEe
Q 024661          243 PRHAF-----SFQTFLSMASRVYI  261 (264)
Q Consensus       243 ~~~~~-----~~~~~~y~ape~~~  261 (264)
                      .....     ..++..|++||++.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~PE~~~  179 (287)
T cd07838         156 IYSFEMALTSVVVTLWYRAPEVLL  179 (287)
T ss_pred             eccCCcccccccccccccChHHhc
Confidence            64322     23567799999764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.95  E-value=1e-28  Score=192.40  Aligned_cols=166  Identities=22%  Similarity=0.307  Sum_probs=137.3

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      +.+-+..||.|+||+|++..++.+|+.+|||.++..  +...+++..|.+...+-  .+.  +++|++++....++..|+
T Consensus        65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks--~~c--p~IVkfyGa~F~EGdcWi  140 (361)
T KOG1006|consen   65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKS--SNC--PNIVKFYGALFSEGDCWI  140 (361)
T ss_pred             hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhh--cCC--cHHHHHhhhhhcCCceee
Confidence            355577899999999999999999999999999854  35566777777765543  333  667999999999999999


Q ss_pred             EEecCCCCHHHHHH---hcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          171 VFEKLGPSLYDFLR---KNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       171 v~e~~~~~L~~~l~---~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      .||+|..+|..+-+   ..+...++|..+..|....+.||+||.+ ..|+||||||+|||++..|.|||||||++-....
T Consensus       141 CMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~  220 (361)
T KOG1006|consen  141 CMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD  220 (361)
T ss_pred             eHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHH
Confidence            99999888776544   3334579999999999999999999985 5899999999999999999999999999965443


Q ss_pred             -----CcccceeeeeceeEee
Q 024661          247 -----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 -----~~~~~~~y~ape~~~~  262 (264)
                           ...|-..|||||-+..
T Consensus       221 SiAkT~daGCrpYmAPERi~p  241 (361)
T KOG1006|consen  221 SIAKTVDAGCRPYMAPERIDP  241 (361)
T ss_pred             HHHhhhccCCccccChhccCC
Confidence                 4456778999997643

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.95  E-value=2.9e-27  Score=198.24  Aligned_cols=166  Identities=26%  Similarity=0.327  Sum_probs=142.8

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech----hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      ....|...+.||+|+||.||+|.+..+++.+++|.+...    ......+.+|+++++.++|+++     +++.+++...
T Consensus        13 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~   87 (308)
T cd06634          13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNT-----IQYRGCYLRE   87 (308)
T ss_pred             cHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCc-----ccEEEEEEcC
Confidence            334588889999999999999999999999999988632    2334567789999999999888     9999999999


Q ss_pred             CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          166 NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       166 ~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      ...|+||||+.++|.+++.... ..+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++....
T Consensus        88 ~~~~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  166 (308)
T cd06634          88 HTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA  166 (308)
T ss_pred             CeeEEEEEccCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeec
Confidence            9999999999778888876543 358999999999999999999999999999999999999999999999999987644


Q ss_pred             C--CcccceeeeeceeEe
Q 024661          246 A--FSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ~--~~~~~~~y~ape~~~  261 (264)
                      .  ...++..|+|||.+.
T Consensus       167 ~~~~~~~~~~y~aPE~~~  184 (308)
T cd06634         167 PANXFVGTPYWMAPEVIL  184 (308)
T ss_pred             CcccccCCccccCHHHHh
Confidence            3  234778899999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.95  E-value=2.3e-27  Score=193.88  Aligned_cols=155  Identities=23%  Similarity=0.383  Sum_probs=136.1

Q ss_pred             cccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC
Q 024661          100 MGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (264)
Q Consensus       100 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  175 (264)
                      ||.|+||.||++.+..+++.+++|++....    ...+.+.+|+++++.+.|+|+     +++++.+..+...|++||++
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i-----~~~~~~~~~~~~~~lv~e~~   75 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYV-----VKLYYSFQGKKNLYLVMEYL   75 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcch-----hHHHHheecCcEEEEEEecC
Confidence            689999999999999999999999987432    345678889999999999888     88999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC-------
Q 024661          176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF-------  247 (264)
Q Consensus       176 -~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~-------  247 (264)
                       +++|.+++.+..  .+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++......       
T Consensus        76 ~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  153 (265)
T cd05579          76 PGGDLASLLENVG--SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND  153 (265)
T ss_pred             CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence             889999998765  7899999999999999999999999999999999999999999999999998653222       


Q ss_pred             -------cccceeeeeceeEe
Q 024661          248 -------SFQTFLSMASRVYI  261 (264)
Q Consensus       248 -------~~~~~~y~ape~~~  261 (264)
                             ..++..|++||.+.
T Consensus       154 ~~~~~~~~~~~~~~~~Pe~~~  174 (265)
T cd05579         154 DEKEDKRIVGTPDYIAPEVIL  174 (265)
T ss_pred             ccccccCcccCccccCHHHhc
Confidence                   23567799999753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.95  E-value=3.5e-27  Score=197.27  Aligned_cols=163  Identities=21%  Similarity=0.274  Sum_probs=135.8

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCc----EEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKE----LVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      ++|+..+.||+|+||.||+|.+..+++    .+++|.+....  .....+.+|+.+++.+.|+|+     +++++++...
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~ni-----v~~~~~~~~~   81 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL-----VRLLGVCLSP   81 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCc-----ccEEEEEcCC
Confidence            568899999999999999999877775    46888776432  334467889999999999988     9999988654


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                       ..++++|++ +|+|.+++.... ..+++..++.++.|++.||.|||++||+|+||||+||+++.++.+||+|||+++..
T Consensus        82 -~~~~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~  159 (303)
T cd05110          82 -TIQLVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLL  159 (303)
T ss_pred             -CceeeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccc
Confidence             567899999 899999987654 35889999999999999999999999999999999999999999999999999754


Q ss_pred             CCC--------cccceeeeeceeEe
Q 024661          245 HAF--------SFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~~~--------~~~~~~y~ape~~~  261 (264)
                      ...        ..++..||+||.+.
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~PE~~~  184 (303)
T cd05110         160 EGDEKEYNADGGKMPIKWMALECIH  184 (303)
T ss_pred             cCcccccccCCCccccccCCHHHhc
Confidence            321        12355799999764

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.95  E-value=1.9e-27  Score=202.26  Aligned_cols=165  Identities=23%  Similarity=0.381  Sum_probs=141.8

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .+.++|++...||+|++|.||+|.+..+++.+++|++...   ....+.+.+|+.+++.+.|+++     +.+.+++...
T Consensus        12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~   86 (343)
T cd07851          12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENV-----IGLLDVFTPA   86 (343)
T ss_pred             cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCH-----HHHHHHhhcc
Confidence            3567899999999999999999999999999999988642   2334567789999999999888     8887777655


Q ss_pred             CE------EEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          166 NH------ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       166 ~~------~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                      +.      .|+|+|+++++|.+++...   .+++..++.++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||
T Consensus        87 ~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg  163 (343)
T cd07851          87 SSLEDFQDVYLVTHLMGADLNNIVKCQ---KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFG  163 (343)
T ss_pred             ccccccccEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccc
Confidence            44      8999999999999998763   59999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCC---CcccceeeeeceeEe
Q 024661          240 VPSPRHA---FSFQTFLSMASRVYI  261 (264)
Q Consensus       240 ~a~~~~~---~~~~~~~y~ape~~~  261 (264)
                      ++.....   ...++..|++||++.
T Consensus       164 ~~~~~~~~~~~~~~~~~y~aPE~~~  188 (343)
T cd07851         164 LARHTDDEMTGYVATRWYRAPEIML  188 (343)
T ss_pred             ccccccccccCCcccccccCHHHHh
Confidence            9976432   234677899999753

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.95  E-value=4.5e-27  Score=199.91  Aligned_cols=165  Identities=24%  Similarity=0.375  Sum_probs=139.6

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .+.++|.+.+.||+|+||.||+|.+..+++.+|+|.+.+.   ......+.+|+.+++.+.|+|+     +++++++...
T Consensus        12 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-----v~~~~~~~~~   86 (342)
T cd07879          12 ELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENV-----IGLLDVFTSA   86 (342)
T ss_pred             ccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCc-----cchhheeccc
Confidence            4457899999999999999999999999999999998643   2334567889999999999988     8888887653


Q ss_pred             ------CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          166 ------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       166 ------~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                            ..+|+|||++..+|.+++.    ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||
T Consensus        87 ~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg  162 (342)
T cd07879          87 VSGDEFQDFYLVMPYMQTDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFG  162 (342)
T ss_pred             ccCCCCceEEEEecccccCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCC
Confidence                  3579999999778877653    258999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCCC---cccceeeeeceeEee
Q 024661          240 VPSPRHAF---SFQTFLSMASRVYIC  262 (264)
Q Consensus       240 ~a~~~~~~---~~~~~~y~ape~~~~  262 (264)
                      ++......   ..++..|+|||.+.+
T Consensus       163 ~~~~~~~~~~~~~~~~~y~aPE~~~~  188 (342)
T cd07879         163 LARHADAEMTGYVVTRWYRAPEVILN  188 (342)
T ss_pred             CCcCCCCCCCCceeeecccChhhhcC
Confidence            99764332   245778999998653

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.95  E-value=8.8e-27  Score=192.56  Aligned_cols=166  Identities=18%  Similarity=0.217  Sum_probs=139.5

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCC----CCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNE----KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~----~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      .++|.+.+.||+|+||.||+|.+..    ++..+++|.+...  ....+.+.+|+.+++.+.|+|+     +++++++..
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-----~~~~~~~~~   79 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNI-----LPILHVCIE   79 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEec
Confidence            4679999999999999999999876    3577999988643  3445678889999999999988     898887655


Q ss_pred             -CCEEEEEEecC-CCCHHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEec
Q 024661          165 -RNHICIVFEKL-GPSLYDFLRKNSY------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  236 (264)
Q Consensus       165 -~~~~~lv~e~~-~~~L~~~l~~~~~------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~  236 (264)
                       ....++++|++ +++|.+++.....      ..+++..++.++.|++.||+|||+++++|+||||+||+++.++.+||+
T Consensus        80 ~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~  159 (280)
T cd05043          80 DGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKIT  159 (280)
T ss_pred             CCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEEC
Confidence             57889999999 8999999976432      358899999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          237 DYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       237 Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      |||+++....        ...++..|+|||.+.
T Consensus       160 d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~  192 (280)
T cd05043         160 DNALSRDLFPMDYHCLGDNENRPVKWMALESLV  192 (280)
T ss_pred             CCCCcccccCCceEEeCCCCCcchhccCHHHHh
Confidence            9999975422        123455699999764

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.95  E-value=4.4e-27  Score=198.86  Aligned_cols=160  Identities=15%  Similarity=0.173  Sum_probs=134.8

Q ss_pred             eecccC--ccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           98 SKMGEG--TFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        98 ~~lg~G--~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      ..||+|  +||+||++.+..+|+.||+|++....   ...+.+.+|+.+++.++|+|+     ++++++|...+..|+||
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~ni-----v~~~~~~~~~~~~~~v~   78 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNI-----MTSWTVFTTGSWLWVIS   78 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCc-----ceEeeeEecCCceEEEE
Confidence            456776  89999999999999999999986432   334678889999999999988     99999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-----
Q 024661          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-----  246 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-----  246 (264)
                      ||+ +++|.+++.......+++..+..++.|++.||+|||++|++||||||+|||++.++.++++||+.+.....     
T Consensus        79 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~  158 (328)
T cd08226          79 PFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA  158 (328)
T ss_pred             ecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence            999 88999999876545689999999999999999999999999999999999999999999999975432111     


Q ss_pred             --------CcccceeeeeceeEee
Q 024661          247 --------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 --------~~~~~~~y~ape~~~~  262 (264)
                              ...++..||+||++.+
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~~  182 (328)
T cd08226         159 KVVYDFPQFSTSVLPWLSPELLRQ  182 (328)
T ss_pred             cccccccccccCccCccChhhhcC
Confidence                    1123456999998754

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.95  E-value=1.2e-26  Score=190.76  Aligned_cols=160  Identities=22%  Similarity=0.284  Sum_probs=132.3

Q ss_pred             CCeEEEeec--ccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeCCEE
Q 024661           92 PRYRILSKM--GEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        92 ~~y~~~~~l--g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      +.|.+.+.+  |+|+||.||++....++..+++|.+.......    .|+.....+ .|+++     +++++.+...+.+
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~----~e~~~~~~~~~h~~i-----v~~~~~~~~~~~~   84 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA----IEPMVHQLMKDNPNF-----IKLYYSVTTLKGH   84 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch----hhHHHHHHhhcCCCE-----EEEEEEEecCCee
Confidence            456776666  99999999999999999999999987532211    122222222 35555     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC-cEEeccCCCCCcCCC
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE-YVKVPDYKVPSPRHA  246 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~-~v~l~Dfg~a~~~~~  246 (264)
                      |+||||+ +++|.+++....  .+++..++.++.|++.||.|||+.|++|+||+|+||+++.++ .++|+|||++.....
T Consensus        85 ~iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~  162 (267)
T PHA03390         85 VLIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT  162 (267)
T ss_pred             EEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCC
Confidence            9999999 899999998765  799999999999999999999999999999999999999998 999999999875443


Q ss_pred             --CcccceeeeeceeEee
Q 024661          247 --FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 --~~~~~~~y~ape~~~~  262 (264)
                        ...++..|+|||++.+
T Consensus       163 ~~~~~~~~~y~aPE~~~~  180 (267)
T PHA03390        163 PSCYDGTLDYFSPEKIKG  180 (267)
T ss_pred             CccCCCCCcccChhhhcC
Confidence              2347788999998753

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.95  E-value=1.4e-26  Score=187.64  Aligned_cols=163  Identities=28%  Similarity=0.427  Sum_probs=144.6

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh-hHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      .|.+.+.||+|++|.||++.+..+++.+++|++..... ....+.+|++.++.+.|+++     +++.+.+......+++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~l~   75 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNI-----VKYYGSYLKKDELWIV   75 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCE-----eEEEEEEecCCeEEEE
Confidence            38889999999999999999998999999999875443 56788899999999998877     9999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC----
Q 024661          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA----  246 (264)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~----  246 (264)
                      +||+ +++|.+++.... ..+++..+..++.|++.||.+||++|++|+||+|+||+++.++.++|+|||.+.....    
T Consensus        76 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  154 (253)
T cd05122          76 MEFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKAR  154 (253)
T ss_pred             EecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccccc
Confidence            9999 799999988763 3689999999999999999999999999999999999999999999999999876543    


Q ss_pred             -CcccceeeeeceeEe
Q 024661          247 -FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 -~~~~~~~y~ape~~~  261 (264)
                       ...++..|++||.+.
T Consensus       155 ~~~~~~~~~~~PE~~~  170 (253)
T cd05122         155 NTMVGTPYWMAPEVIN  170 (253)
T ss_pred             cceecCCcccCHHHHc
Confidence             234677899999764

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.95  E-value=2.4e-27  Score=216.91  Aligned_cols=167  Identities=18%  Similarity=0.276  Sum_probs=143.9

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCc-----EEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceee
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKE-----LVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~  162 (264)
                      -...-++.+.||+|.||.||.|.......     .||+|.+++.  .+....|.+|..+++.+.|+|+     +++++.+
T Consensus       690 ~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNi-----v~liGv~  764 (1025)
T KOG1095|consen  690 PRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNI-----VSLIGVC  764 (1025)
T ss_pred             ChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcce-----eeEEEee
Confidence            34567889999999999999999865432     4899988754  5667899999999999999998     9999999


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHHhc-----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEec
Q 024661          163 DYRNHICIVFEKL-GPSLYDFLRKN-----SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  236 (264)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~-----~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~  236 (264)
                      -+....+|++||| +|+|..+|+..     +...++....+.++.||+.|+.||+++++|||||..+|+|++....|||+
T Consensus       765 l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIa  844 (1025)
T KOG1095|consen  765 LDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIA  844 (1025)
T ss_pred             cCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEc
Confidence            9999999999999 99999999975     12468999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcCCCCcc----c----ceeeeeceeEe
Q 024661          237 DYKVPSPRHAFSF----Q----TFLSMASRVYI  261 (264)
Q Consensus       237 Dfg~a~~~~~~~~----~----~~~y~ape~~~  261 (264)
                      |||+|+......+    +    ...||+||.+.
T Consensus       845 DFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~  877 (1025)
T KOG1095|consen  845 DFGLARDIYDKDYYRKHGEAMLPVKWMPPESLK  877 (1025)
T ss_pred             ccchhHhhhhchheeccCccccceecCCHHHHh
Confidence            9999996443221    1    13599999864

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.95  E-value=9.7e-27  Score=193.11  Aligned_cols=163  Identities=24%  Similarity=0.337  Sum_probs=138.2

Q ss_pred             CeEEEeecccCccEEEEEEEeC---CCCcEEEEEEEechh-----hhHHHHHHHHHHHHHHh-ccCCCCcceEEEceeee
Q 024661           93 RYRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~  163 (264)
                      +|++.+.||.|++|.||++.+.   .+++.+++|++++..     ...+.+.+|+.+++++. |+++     +.+++.+.
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i-----~~~~~~~~   75 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFL-----VTLHYAFQ   75 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcch-----hhhheeee
Confidence            3889999999999999999864   357889999987432     23456778999999995 6666     88899999


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                      .+...|+||||+ +++|.+++....  .+++..++.++.|++.+|.|||+.|++|+||+|+||+++.++.++|+|||++.
T Consensus        76 ~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~  153 (288)
T cd05583          76 TDTKLHLILDYVNGGELFTHLYQRE--HFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSK  153 (288)
T ss_pred             cCCEEEEEEecCCCCcHHHHHhhcC--CcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccc
Confidence            999999999999 889999987654  68999999999999999999999999999999999999999999999999986


Q ss_pred             cCCC-------CcccceeeeeceeEee
Q 024661          243 PRHA-------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       243 ~~~~-------~~~~~~~y~ape~~~~  262 (264)
                      ....       ...++..|++||.+.+
T Consensus       154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~  180 (288)
T cd05583         154 EFLAEEEERAYSFCGTIEYMAPEVIRG  180 (288)
T ss_pred             ccccccccccccccCCccccCHHHhcC
Confidence            5322       1236778999997643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.95  E-value=4.7e-27  Score=194.97  Aligned_cols=165  Identities=22%  Similarity=0.324  Sum_probs=138.3

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHh-ccCCCCcceEEEceeeeeCCEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      +|...+.||+|+||.||++.+..+++.+|+|.+...  ......+.+|+.++.++. |+++     +++++++..++..+
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i-----v~~~~~~~~~~~~~   79 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYI-----VKFYGALFREGDCW   79 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCE-----eeeeeEEecCCcEE
Confidence            467788999999999999999999999999988643  234567788999999886 7776     99999999999999


Q ss_pred             EEEecCCCCHHHHHH---hcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          170 IVFEKLGPSLYDFLR---KNSYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       170 lv~e~~~~~L~~~l~---~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      ++||++++++.++..   ......+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++....
T Consensus        80 ~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  159 (288)
T cd06616          80 ICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV  159 (288)
T ss_pred             EEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence            999999777766543   22234799999999999999999999974 99999999999999999999999999986532


Q ss_pred             C-----CcccceeeeeceeEee
Q 024661          246 A-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~-----~~~~~~~y~ape~~~~  262 (264)
                      .     ...++..|+|||.+.+
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~  181 (288)
T cd06616         160 DSIAKTRDAGCRPYMAPERIDP  181 (288)
T ss_pred             cCCccccccCccCccCHHHhcc
Confidence            2     2346778999998753

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.95  E-value=1.1e-26  Score=190.10  Aligned_cols=158  Identities=18%  Similarity=0.211  Sum_probs=129.5

Q ss_pred             eecccCccEEEEEEEeCC---CCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeee-eCCEEEEE
Q 024661           98 SKMGEGTFGQVVECFDNE---KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD-YRNHICIV  171 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~-~~~~~~lv  171 (264)
                      +.||+|+||.||+|.+..   .+..+|+|.+...  ....+.+.+|+.+++.++|+|+     +++++.+. .++..+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~~~~lv   75 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNV-----LSLLGICLPSEGSPLVV   75 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCc-----ceEEEEeecCCCCcEEE
Confidence            368999999999998653   3457999987532  3345677889999999999888     88888654 46678999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC----
Q 024661          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA----  246 (264)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~----  246 (264)
                      |||+ +++|.+++.... ...++..+..++.|++.||.|||+.+++|+||||+|||++.++.++|+|||+++....    
T Consensus        76 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~  154 (262)
T cd05058          76 LPYMKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY  154 (262)
T ss_pred             EecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcce
Confidence            9999 899999998653 3467788899999999999999999999999999999999999999999999875322    


Q ss_pred             ------CcccceeeeeceeEe
Q 024661          247 ------FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ------~~~~~~~y~ape~~~  261 (264)
                            ...++..|+|||.+.
T Consensus       155 ~~~~~~~~~~~~~y~aPE~~~  175 (262)
T cd05058         155 SVHNHTGAKLPVKWMALESLQ  175 (262)
T ss_pred             eecccccCcCCccccChhHhc
Confidence                  122456799999764

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.95  E-value=1.2e-26  Score=188.86  Aligned_cols=165  Identities=28%  Similarity=0.404  Sum_probs=142.9

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      +|++.++||.|+||.||++.+..+++.+++|.+...   ......+.+|+++++.++|+++     +.+.+.+.+....|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~   75 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNI-----ISYKEAFLDGNKLC   75 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCc-----hhhhhhhccCCEEE
Confidence            489999999999999999999999999999998743   2345567789999999998887     89999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          170 IVFEKL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      +||||+ +++|.+++....  ...+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus        76 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~  155 (256)
T cd08530          76 IVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKK  155 (256)
T ss_pred             EEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhcc
Confidence            999999 899999987621  23689999999999999999999999999999999999999999999999999865433


Q ss_pred             ----CcccceeeeeceeEee
Q 024661          247 ----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ----~~~~~~~y~ape~~~~  262 (264)
                          ...++..|++||.+.+
T Consensus       156 ~~~~~~~~~~~~~~Pe~~~~  175 (256)
T cd08530         156 NMAKTQIGTPHYMAPEVWKG  175 (256)
T ss_pred             CCcccccCCccccCHHHHCC
Confidence                2346778999997643

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=5.9e-29  Score=194.79  Aligned_cols=159  Identities=19%  Similarity=0.304  Sum_probs=135.5

Q ss_pred             EeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC-----CEE
Q 024661           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR-----NHI  168 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~-----~~~  168 (264)
                      -+.||-|.||.||.+++..+|+.|++|.+...   -...+.+.+|+.+|..++|.|+     ...++..+-.     .++
T Consensus        58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNV-----LSaLDILQPph~dfFqEi  132 (449)
T KOG0664|consen   58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNV-----LSLLDILQPANPSFFQEL  132 (449)
T ss_pred             CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccH-----HHHHHhcCCCCchHHHHH
Confidence            46899999999999999999999999987532   2345778899999999999987     5555444321     357


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCCc
Q 024661          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS  248 (264)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~~  248 (264)
                      |+++|++..+|..++-+-+  .++.+.+.-++.||+.||.|||+.+|.||||||.|+|++++..+||||||+|+......
T Consensus       133 YV~TELmQSDLHKIIVSPQ--~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~  210 (449)
T KOG0664|consen  133 YVLTELMQSDLHKIIVSPQ--ALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRD  210 (449)
T ss_pred             HHHHHHHHhhhhheeccCC--CCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhh
Confidence            8999999999999988765  78999999999999999999999999999999999999999999999999998755433


Q ss_pred             -------ccceeeeeceeEee
Q 024661          249 -------FQTFLSMASRVYIC  262 (264)
Q Consensus       249 -------~~~~~y~ape~~~~  262 (264)
                             .-|.+|.|||++++
T Consensus       211 ~~hMTqEVVTQYYRAPEiLMG  231 (449)
T KOG0664|consen  211 RLNMTHEVVTQYYRAPELLMG  231 (449)
T ss_pred             hhhhHHHHHHHHhccHHHhhc
Confidence                   35788999999886

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.94  E-value=5.5e-27  Score=193.78  Aligned_cols=163  Identities=29%  Similarity=0.494  Sum_probs=142.1

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      |++.+.||.|++|.||+|.+..+++.+++|.+....   .....+.+|+.+++.+.|+++     +++++.+.+....++
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i-----~~~~~~~~~~~~~~~   75 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNI-----IKLLDVFRHKGDLYL   75 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCc-----chHHHhhccCCCEEE
Confidence            567889999999999999999899999999886432   235677889999999998888     999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC---
Q 024661          171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF---  247 (264)
Q Consensus       171 v~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~---  247 (264)
                      +|||+.++|.+++.... ..+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||.+......   
T Consensus        76 v~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~  154 (283)
T cd05118          76 VFEFMDTDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRP  154 (283)
T ss_pred             EEeccCCCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCccc
Confidence            99999779999888753 46899999999999999999999999999999999999999999999999998765432   


Q ss_pred             ---cccceeeeeceeEee
Q 024661          248 ---SFQTFLSMASRVYIC  262 (264)
Q Consensus       248 ---~~~~~~y~ape~~~~  262 (264)
                         ..++..|++||.+.+
T Consensus       155 ~~~~~~~~~~~~PE~~~~  172 (283)
T cd05118         155 YTHYVVTRWYRAPELLLG  172 (283)
T ss_pred             ccCccCcccccCcHHHhc
Confidence               346778999997653

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.94  E-value=6.4e-27  Score=193.30  Aligned_cols=162  Identities=29%  Similarity=0.472  Sum_probs=141.7

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      |++.+.||+|.+|.||+|+...+++.+++|.+...   ....+.+..|+.+++.+.|+++     +++++++.+.+..++
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i-----~~~~~~~~~~~~~~~   75 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNI-----VKLLDVIHTERKLYL   75 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCH-----HHHHhhhhcCCceEE
Confidence            67788999999999999999999999999998753   3345677889999999998887     999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC---
Q 024661          171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF---  247 (264)
Q Consensus       171 v~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~---  247 (264)
                      |||+++++|.+++.... ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++......   
T Consensus        76 v~e~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~  154 (282)
T cd07829          76 VFEYCDMDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRT  154 (282)
T ss_pred             EecCcCcCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccc
Confidence            99999889999998763 36999999999999999999999999999999999999999999999999998754322   


Q ss_pred             ---cccceeeeeceeEe
Q 024661          248 ---SFQTFLSMASRVYI  261 (264)
Q Consensus       248 ---~~~~~~y~ape~~~  261 (264)
                         ...+..|+|||.+.
T Consensus       155 ~~~~~~~~~~~aPE~~~  171 (282)
T cd07829         155 YTHEVVTLWYRAPEILL  171 (282)
T ss_pred             cCccccCcCcCChHHhc
Confidence               23466799999764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.94  E-value=8.6e-27  Score=193.97  Aligned_cols=160  Identities=23%  Similarity=0.320  Sum_probs=138.1

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      |....+||+|+||.||++....+++.+++|.+... ......+.+|+.+++.+.|+++     +++++.+...+..|++|
T Consensus        22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~~~lv~   96 (292)
T cd06657          22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV-----VEMYNSYLVGDELWVVM   96 (292)
T ss_pred             hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcch-----hheeeEEEeCCEEEEEE
Confidence            44457899999999999999999999999988632 2345678889999999998888     99999999999999999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-----
Q 024661          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-----  246 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-----  246 (264)
                      ||+ +++|.+++...   .+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||++.....     
T Consensus        97 e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~  173 (292)
T cd06657          97 EFLEGGALTDIVTHT---RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR  173 (292)
T ss_pred             ecCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccc
Confidence            999 88999887653   589999999999999999999999999999999999999999999999998764322     


Q ss_pred             -CcccceeeeeceeEe
Q 024661          247 -FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 -~~~~~~~y~ape~~~  261 (264)
                       ...++..|++||.+.
T Consensus       174 ~~~~~~~~y~~pE~~~  189 (292)
T cd06657         174 KSLVGTPYWMAPELIS  189 (292)
T ss_pred             cccccCccccCHHHhc
Confidence             224677899999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.94  E-value=2.2e-26  Score=201.89  Aligned_cols=172  Identities=22%  Similarity=0.366  Sum_probs=133.4

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeC----------------CCCcEEEEEEEechhh-h--------------HHHHHHH
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDN----------------EKKELVAIKIVRSINK-Y--------------REAAMIE  138 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~----------------~~~~~vaiK~~~~~~~-~--------------~~~~~~e  138 (264)
                      -.++|++.++||+|+||.||+|.+.                ..++.||||.++.... .              .+....|
T Consensus       143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE  222 (507)
T PLN03224        143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE  222 (507)
T ss_pred             cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence            3568999999999999999999752                2346799999864221 1              1223447


Q ss_pred             HHHHHHHhccCCCCcceEEEceeeee--------CCEEEEEEecC-CCCHHHHHHhcC----------------------
Q 024661          139 IDVLQRLARHDIGGTRCVQIRNWFDY--------RNHICIVFEKL-GPSLYDFLRKNS----------------------  187 (264)
Q Consensus       139 ~~~l~~l~~~~~~~~~~~~~~~~~~~--------~~~~~lv~e~~-~~~L~~~l~~~~----------------------  187 (264)
                      +.++.++.|.++.+.+++.+++++..        ++..|+||||+ +++|.+++....                      
T Consensus       223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            77888888887766667777777643        45789999999 999999886421                      


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-------CcccceeeeeceeE
Q 024661          188 YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-------FSFQTFLSMASRVY  260 (264)
Q Consensus       188 ~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-------~~~~~~~y~ape~~  260 (264)
                      ...+++..++.++.|++.+|.|||+.+|+||||||+|||++.++.++|+|||++.....       ....++.|++||.+
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l  382 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEEL  382 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhh
Confidence            11245678899999999999999999999999999999999999999999999865322       12246789999987


Q ss_pred             e
Q 024661          261 I  261 (264)
Q Consensus       261 ~  261 (264)
                      .
T Consensus       383 ~  383 (507)
T PLN03224        383 V  383 (507)
T ss_pred             c
Confidence            5

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.94  E-value=8.7e-27  Score=191.36  Aligned_cols=159  Identities=19%  Similarity=0.300  Sum_probs=132.9

Q ss_pred             eecccCccEEEEEEEeCCCC------cEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           98 SKMGEGTFGQVVECFDNEKK------ELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~------~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      +.||.|+||.||+|++....      +.+++|.+....  .....+.+|+.+++.++|+++     +++++++.+....+
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~   75 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNI-----VKLLGVCLLNEPQY   75 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCe-----eeEeeeecCCCCeE
Confidence            36899999999999976433      679999876432  345678889999999999888     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC-----cEEeccC
Q 024661          170 IVFEKL-GPSLYDFLRKNS-----YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE-----YVKVPDY  238 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~-----~v~l~Df  238 (264)
                      +||||+ +++|.+++....     ...+++..+..++.|++.||.|||+++++|+||+|+||+++.++     .++|+||
T Consensus        76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~df  155 (269)
T cd05044          76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDF  155 (269)
T ss_pred             EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCc
Confidence            999999 899999997532     23478899999999999999999999999999999999999887     8999999


Q ss_pred             CCCCcCCC--------CcccceeeeeceeEe
Q 024661          239 KVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       239 g~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      |++.....        ....+..|++||.+.
T Consensus       156 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  186 (269)
T cd05044         156 GLARDIYKSDYYRKEGEGLLPVRWMAPESLL  186 (269)
T ss_pred             ccccccccccccccCcccCCCccccCHHHHc
Confidence            99865321        123456799999764

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.94  E-value=1.5e-26  Score=194.20  Aligned_cols=154  Identities=17%  Similarity=0.158  Sum_probs=130.0

Q ss_pred             ccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC-CCCH
Q 024661          104 TFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSL  179 (264)
Q Consensus       104 ~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L  179 (264)
                      ++|.||+++...+++.+|+|++...   ......+.+|+++++.++|+|+     +.+++++...+..|++|||+ +++|
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i-----~~~~~~~~~~~~~~~~~e~~~~~~l   86 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNI-----LPYVTSFIVDSELYVVSPLMAYGSC   86 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcch-----hhhhheeecCCeEEEEEeccCCCCH
Confidence            4455666666778999999998743   3445678899999999999888     99999999999999999999 8999


Q ss_pred             HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-------------
Q 024661          180 YDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-------------  246 (264)
Q Consensus       180 ~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-------------  246 (264)
                      .+++.......+++..+..++.|++.||+|||+++|+|+||||+||+++.++.++|+|||.+.....             
T Consensus        87 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~  166 (314)
T cd08216          87 EDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPK  166 (314)
T ss_pred             HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccc
Confidence            9999875445689999999999999999999999999999999999999999999999998864321             


Q ss_pred             CcccceeeeeceeEee
Q 024661          247 FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ~~~~~~~y~ape~~~~  262 (264)
                      ...++..|+|||++.+
T Consensus       167 ~~~~~~~y~aPE~~~~  182 (314)
T cd08216         167 SSVKNLPWLSPEVLQQ  182 (314)
T ss_pred             cccccccccCHHHhcC
Confidence            1235667999998643

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.94  E-value=3.1e-26  Score=190.88  Aligned_cols=164  Identities=23%  Similarity=0.338  Sum_probs=137.7

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHh-ccCCCCcceEEEceeeeeCCEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      +.|++.+.||+|++|.||+|.+..+++.+|+|.+++..  .....+..|+.++.... |+++     +++++++.+....
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i-----~~~~~~~~~~~~~   89 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYI-----VKCYGYFITDSDV   89 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCch-----HhhheeeecCCeE
Confidence            66999999999999999999999889999999987532  23345566776666654 6666     9999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-
Q 024661          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-  246 (264)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-  246 (264)
                      |++|||++++|.+++.... ..+++..+..++.|++.||.|||+ .||+|+||+|+||++++++.++|+|||++..... 
T Consensus        90 ~~v~e~~~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~  168 (296)
T cd06618          90 FICMELMSTCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS  168 (296)
T ss_pred             EEEeeccCcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence            9999999888888877643 378999999999999999999997 6999999999999999999999999999865332 


Q ss_pred             ----CcccceeeeeceeEe
Q 024661          247 ----FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ----~~~~~~~y~ape~~~  261 (264)
                          ...++..|+|||.+.
T Consensus       169 ~~~~~~~~~~~y~aPE~~~  187 (296)
T cd06618         169 KAKTRSAGCAAYMAPERID  187 (296)
T ss_pred             CcccCCCCCccccCHhhcC
Confidence                223567899999875

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.94  E-value=2.7e-26  Score=186.27  Aligned_cols=155  Identities=26%  Similarity=0.441  Sum_probs=137.7

Q ss_pred             cccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC
Q 024661          100 MGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (264)
Q Consensus       100 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  175 (264)
                      ||.|+||.||++.+..+++.+++|++.+..    .....+..|+.+++.+.|+++     +.+++.+..+...|++||++
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~~v~e~~   75 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFI-----VKLHYAFQTEEKLYLVLEYA   75 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcH-----HHHHHHeecCCeeEEEEecC
Confidence            689999999999999889999999987533    244578889999999998887     99999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC------Cc
Q 024661          176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA------FS  248 (264)
Q Consensus       176 -~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~------~~  248 (264)
                       +++|.+++....  .+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++.....      ..
T Consensus        76 ~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~  153 (250)
T cd05123          76 PGGELFSHLSKEG--RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTF  153 (250)
T ss_pred             CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCC
Confidence             999999998765  689999999999999999999999999999999999999999999999999876443      23


Q ss_pred             ccceeeeeceeEe
Q 024661          249 FQTFLSMASRVYI  261 (264)
Q Consensus       249 ~~~~~y~ape~~~  261 (264)
                      .++..|++||.+.
T Consensus       154 ~~~~~~~~Pe~~~  166 (250)
T cd05123         154 CGTPEYLAPEVLL  166 (250)
T ss_pred             cCCccccChHHhC
Confidence            4677899999764

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=2.1e-29  Score=195.07  Aligned_cols=167  Identities=22%  Similarity=0.400  Sum_probs=140.0

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEec---hhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee--
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--  164 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~--  164 (264)
                      ..+.|.-..+||+|.||.||+|+.+.+|+.||+|.+--   .........+|+.+|+.++|+|+     +.+++.+..  
T Consensus        15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv-----~nliEic~tk~   89 (376)
T KOG0669|consen   15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENV-----VNLIEICRTKA   89 (376)
T ss_pred             cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhH-----HHHHHHHhhcc
Confidence            34668889999999999999999999999999886532   33455677899999999999998     444444422  


Q ss_pred             ------CCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccC
Q 024661          165 ------RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY  238 (264)
Q Consensus       165 ------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Df  238 (264)
                            ...+|+||++|..+|..++.... .+++...+..++.+++.||.|+|++.|+|||+|+.|+||+.+|.+||+||
T Consensus        90 Tp~~r~r~t~ylVf~~cehDLaGlLsn~~-vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADF  168 (376)
T KOG0669|consen   90 TPTNRDRATFYLVFDFCEHDLAGLLSNRK-VRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADF  168 (376)
T ss_pred             CCcccccceeeeeHHHhhhhHHHHhcCcc-ccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecc
Confidence                  45699999999999999998764 57999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcCCC----C------cccceeeeeceeEee
Q 024661          239 KVPSPRHA----F------SFQTFLSMASRVYIC  262 (264)
Q Consensus       239 g~a~~~~~----~------~~~~~~y~ape~~~~  262 (264)
                      |+++....    .      ..-|..|..||.+++
T Consensus       169 Glar~fs~~~n~~kprytnrvvTLwYrppEllLG  202 (376)
T KOG0669|consen  169 GLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLG  202 (376)
T ss_pred             ccccceecccccCCCCcccceeeeecCCHHHhhc
Confidence            99965322    1      123788999998765

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.94  E-value=4.1e-26  Score=187.43  Aligned_cols=165  Identities=21%  Similarity=0.399  Sum_probs=136.2

Q ss_pred             CeEEEeecccCccEEEEEEEeCC-CCcEEEEEEEech-----------hhhHHHHHHHHHHHHH-HhccCCCCcceEEEc
Q 024661           93 RYRILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSI-----------NKYREAAMIEIDVLQR-LARHDIGGTRCVQIR  159 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~-----------~~~~~~~~~e~~~l~~-l~~~~~~~~~~~~~~  159 (264)
                      .|++.+.||+|+||.||+|.+.. +++.+++|.+...           ......+..|+.++.. +.|+|+     +.++
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i-----~~~~   75 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNI-----VRYY   75 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCe-----eeEE
Confidence            37889999999999999999987 6788999987521           1223445667776664 567766     9999


Q ss_pred             eeeeeCCEEEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEeecCCcEEe
Q 024661          160 NWFDYRNHICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKV  235 (264)
Q Consensus       160 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~Nili~~~~~v~l  235 (264)
                      +++..++..|++|||+ +++|.+++...  ....+++..++.++.|++.+|.|||+ .|++|+||+|+||+++.++.++|
T Consensus        76 ~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l  155 (269)
T cd08528          76 KTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTI  155 (269)
T ss_pred             eeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEE
Confidence            9999999999999999 88999988542  23468999999999999999999996 78999999999999999999999


Q ss_pred             ccCCCCCcCCC-----CcccceeeeeceeEee
Q 024661          236 PDYKVPSPRHA-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       236 ~Dfg~a~~~~~-----~~~~~~~y~ape~~~~  262 (264)
                      +|||++.....     ...++..|++||.+.+
T Consensus       156 ~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~  187 (269)
T cd08528         156 TDFGLAKQKQPESKLTSVVGTILYSCPEIVKN  187 (269)
T ss_pred             ecccceeecccccccccccCcccCcChhhhcC
Confidence            99999876443     2346778999998654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.94  E-value=4.5e-27  Score=202.02  Aligned_cols=163  Identities=20%  Similarity=0.278  Sum_probs=148.7

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEe
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE  173 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e  173 (264)
                      .....+||.|.||.||.|.++.-.-.||||.++.+....++|..|..+++.++|+|+     |+++++|..+..+|||+|
T Consensus       269 ItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNL-----VqLLGVCT~EpPFYIiTE  343 (1157)
T KOG4278|consen  269 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNL-----VQLLGVCTHEPPFYIITE  343 (1157)
T ss_pred             eeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccH-----HHHhhhhccCCCeEEEEe
Confidence            455778999999999999999988899999999888999999999999999999998     999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCCcc---
Q 024661          174 KL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSF---  249 (264)
Q Consensus       174 ~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~~~---  249 (264)
                      || .|+|.+||+......++.-.+++++.||..|++||..+++|||||..+|+|+.++..||++|||+++.-...++   
T Consensus       344 fM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAH  423 (1157)
T KOG4278|consen  344 FMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAH  423 (1157)
T ss_pred             cccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecc
Confidence            99 99999999977656788888999999999999999999999999999999999999999999999998665543   


Q ss_pred             ----cceeeeeceeEe
Q 024661          250 ----QTFLSMASRVYI  261 (264)
Q Consensus       250 ----~~~~y~ape~~~  261 (264)
                          ....|.|||-++
T Consensus       424 AGAKFPIKWTAPEsLA  439 (1157)
T KOG4278|consen  424 AGAKFPIKWTAPESLA  439 (1157)
T ss_pred             cCccCcccccCccccc
Confidence                233599999754

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.94  E-value=3.9e-26  Score=184.35  Aligned_cols=148  Identities=16%  Similarity=0.221  Sum_probs=124.0

Q ss_pred             CccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC-CCCHHH
Q 024661          103 GTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYD  181 (264)
Q Consensus       103 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~  181 (264)
                      |.+|.||++.+..+++.+++|.+.....    ...|...+....|+|+     +++++++.+.+..|++|||+ +++|.+
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~----~~~~~~~~~~~~~~~i-----~~~~~~~~~~~~~~lv~e~~~~~~L~~   74 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSE----YSRERLTIIPHCVPNM-----VCLHKYIVSEDSVFLVLQHAEGGKLWS   74 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhh----hhhHHHHHHhcCCCce-----eehhhheecCCeEEEEEecCCCCCHHH
Confidence            8899999999999999999999875432    2234444444445555     99999999999999999999 899999


Q ss_pred             HHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---Ccccceeeeece
Q 024661          182 FLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---FSFQTFLSMASR  258 (264)
Q Consensus       182 ~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---~~~~~~~y~ape  258 (264)
                      ++....  .+++..+..++.|++.||+|||++||+|+||||+||+++.++.++|+|||.+.....   ....+..||+||
T Consensus        75 ~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE  152 (237)
T cd05576          75 HISKFL--NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPE  152 (237)
T ss_pred             HHHHhc--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCc
Confidence            998765  689999999999999999999999999999999999999999999999998765433   223456799999


Q ss_pred             eEe
Q 024661          259 VYI  261 (264)
Q Consensus       259 ~~~  261 (264)
                      .+.
T Consensus       153 ~~~  155 (237)
T cd05576         153 VGG  155 (237)
T ss_pred             ccC
Confidence            763

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.94  E-value=2.7e-26  Score=205.60  Aligned_cols=168  Identities=18%  Similarity=0.227  Sum_probs=117.9

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCC----CcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEcee--ee
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEK----KELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNW--FD  163 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~----~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~--~~  163 (264)
                      ..++|.+.+.||+|+||.||+|.+..+    +..||+|.+..... .+....+  .++...+.++. ..+..+...  ..
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-~e~~~~e--~l~~~~~~~~~-~~~~~~~~~~~~~  205 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-VEIWMNE--RVRRACPNSCA-DFVYGFLEPVSSK  205 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-hHHHHHH--HHHhhchhhHH-HHHHhhhcccccc
Confidence            346799999999999999999999988    89999998764221 1111111  11111111110 000111110  24


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhcCCC------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKNSYR------------------SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPEN  224 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~------------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~N  224 (264)
                      .....++||||+ +++|.+++......                  ...+..+..++.||+.||+|||++||+||||||+|
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~N  285 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQN  285 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHH
Confidence            567899999999 88999998754210                  11234567899999999999999999999999999


Q ss_pred             EEeec-CCcEEeccCCCCCcCC-------CCcccceeeeeceeEe
Q 024661          225 ILLVS-AEYVKVPDYKVPSPRH-------AFSFQTFLSMASRVYI  261 (264)
Q Consensus       225 ili~~-~~~v~l~Dfg~a~~~~-------~~~~~~~~y~ape~~~  261 (264)
                      ||++. ++.+||+|||+|+...       ....+++.|||||.+.
T Consensus       286 ILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~  330 (566)
T PLN03225        286 IIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYI  330 (566)
T ss_pred             EEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhh
Confidence            99996 5799999999997532       2345778899999653

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.93  E-value=6e-26  Score=174.85  Aligned_cols=149  Identities=27%  Similarity=0.420  Sum_probs=128.8

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ...++|.++++||+|+||-+|+|....+|+.||||+-.. +.....+..|..+.+.+++-.    .+..+..++..+.+-
T Consensus        12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~-~a~hpqL~yEskvY~iL~~g~----GiP~i~~y~~e~~yn   86 (341)
T KOG1163|consen   12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESS-KAKHPQLLYESKVYRILQGGV----GIPHIRHYGTEKDYN   86 (341)
T ss_pred             eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecc-cCCCcchhHHHHHHHHhccCC----CCchhhhhccccccc
Confidence            455789999999999999999999999999999997543 334456778999999998742    236667777788899


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC---CcEEeccCCCCCc
Q 024661          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA---EYVKVPDYKVPSP  243 (264)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~---~~v~l~Dfg~a~~  243 (264)
                      .+|||++|.+|.+++.-.. ..|+.+.++.++.|++.-++|+|.++++||||||+|+|++-+   .++.|+|||+|..
T Consensus        87 vlVMdLLGPsLEdLfnfC~-R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKk  163 (341)
T KOG1163|consen   87 VLVMDLLGPSLEDLFNFCS-RRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKK  163 (341)
T ss_pred             eeeeeccCccHHHHHHHHh-hhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhh
Confidence            9999999999999987543 479999999999999999999999999999999999999865   4789999999976

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.93  E-value=1.2e-25  Score=185.03  Aligned_cols=162  Identities=16%  Similarity=0.207  Sum_probs=131.5

Q ss_pred             eEEEeecccCccEEEEEEEeC---CCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC--
Q 024661           94 YRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR--  165 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~--  165 (264)
                      |++.+.||+|+||.||+|.+.   .+++.+|+|++...   ....+.+.+|+.+++.+.|+++     +++++++...  
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~   75 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNV-----IKLIGVSLRSRA   75 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCc-----ceEEEEEccCCC
Confidence            667889999999999999864   35788999988643   2345667889999999999988     9999887543  


Q ss_pred             ----CEEEEEEecC-CCCHHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEec
Q 024661          166 ----NHICIVFEKL-GPSLYDFLRKN----SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  236 (264)
Q Consensus       166 ----~~~~lv~e~~-~~~L~~~l~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~  236 (264)
                          ...++++||+ +++|.+++...    ....+++..+..++.|++.||+|||++||+|+||||+||+++.++.++|+
T Consensus        76 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~  155 (273)
T cd05074          76 KGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVA  155 (273)
T ss_pred             CCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEEC
Confidence                2357899999 89999887532    11247889999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcCCC--------CcccceeeeeceeE
Q 024661          237 DYKVPSPRHA--------FSFQTFLSMASRVY  260 (264)
Q Consensus       237 Dfg~a~~~~~--------~~~~~~~y~ape~~  260 (264)
                      |||+++....        ...++..|++||.+
T Consensus       156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~  187 (273)
T cd05074         156 DFGLSKKIYSGDYYRQGCASKLPVKWLALESL  187 (273)
T ss_pred             cccccccccCCcceecCCCccCchhhcCHhHH
Confidence            9999876432        11234568999964

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.93  E-value=8.1e-26  Score=175.83  Aligned_cols=137  Identities=21%  Similarity=0.188  Sum_probs=107.1

Q ss_pred             EeecccCccEEEEEEEeCCCCcEEEEEEEechhh---h------------------------HHHHHHHHHHHHHHhccC
Q 024661           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---Y------------------------REAAMIEIDVLQRLARHD  149 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~------------------------~~~~~~e~~~l~~l~~~~  149 (264)
                      .+.||+|++|.||+|.+. +|+.||+|+++....   .                        ......|+.+++.+.+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG   80 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            468999999999999986 899999999874321   0                        112245999999999887


Q ss_pred             CCCcceEEEceeeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH-HHCCCeecCCCCCCEEe
Q 024661          150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM-HELRLIHTDLKPENILL  227 (264)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l-H~~~ivH~dikp~Nili  227 (264)
                      +..+....      . ...+|||||+ ++++.......  ..+++..+..++.|++.+|.++ |+.||+||||||+|||+
T Consensus        81 v~~p~~~~------~-~~~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli  151 (190)
T cd05147          81 IPCPEPIL------L-KSHVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLY  151 (190)
T ss_pred             CCCCcEEE------e-cCCEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE
Confidence            74444332      1 1238999999 55555443332  3689999999999999999999 79999999999999999


Q ss_pred             ecCCcEEeccCCCCCcC
Q 024661          228 VSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       228 ~~~~~v~l~Dfg~a~~~  244 (264)
                      + ++.++|+|||+|...
T Consensus       152 ~-~~~v~LiDFG~a~~~  167 (190)
T cd05147         152 H-DGKLYIIDVSQSVEH  167 (190)
T ss_pred             E-CCcEEEEEccccccC
Confidence            8 588999999999754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.93  E-value=1.5e-26  Score=202.84  Aligned_cols=164  Identities=22%  Similarity=0.304  Sum_probs=145.4

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCC---cEEEEEEEec--hhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKK---ELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~---~~vaiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      ..-.+.++||.|.||.||+|+.+..|   ..||||.++.  .++.+.+|..|..|+-+++||||     +++.++.....
T Consensus       629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNI-----IrLEGVVTks~  703 (996)
T KOG0196|consen  629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNI-----IRLEGVVTKSK  703 (996)
T ss_pred             hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcE-----EEEEEEEecCc
Confidence            44678889999999999999987765   4699999984  35677899999999999999998     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      .+.||+||| +|+|+.+|+.+.++ |+..++.-+++.|+.|+.||-++++|||||..+|||++.+-.+|++|||+++...
T Consensus       704 PvMIiTEyMENGsLDsFLR~~DGq-ftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvle  782 (996)
T KOG0196|consen  704 PVMIITEYMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE  782 (996)
T ss_pred             eeEEEhhhhhCCcHHHHHhhcCCc-eEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecc
Confidence            999999999 99999999988744 9999999999999999999999999999999999999999999999999999875


Q ss_pred             CCcc---cc------eeeeeceeEe
Q 024661          246 AFSF---QT------FLSMASRVYI  261 (264)
Q Consensus       246 ~~~~---~~------~~y~ape~~~  261 (264)
                      +..-   .|      ..|.|||.++
T Consensus       783 dd~~~~ytt~GGKIPiRWTAPEAIa  807 (996)
T KOG0196|consen  783 DDPEAAYTTLGGKIPIRWTAPEAIA  807 (996)
T ss_pred             cCCCccccccCCccceeecChhHhh
Confidence            5441   11      2499999764

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.93  E-value=5.8e-26  Score=185.62  Aligned_cols=163  Identities=27%  Similarity=0.348  Sum_probs=135.5

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEec------hhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS------INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      +|.+.+.||+|+||.||++.+...+..+++|+++.      .......+..|+.+++.++|+|+     +++++++.+..
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~   75 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAI-----VKFHASFLERD   75 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcH-----HHHHHHHhcCC
Confidence            58999999999999999999988777677776652      12233456678899999999888     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          167 HICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      ..++||||+ +++|.+++...  ....+++..++.++.|++.||.|||+.|++|+||+|+||+++. +.++|+|||++..
T Consensus        76 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~  154 (260)
T cd08222          76 AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRL  154 (260)
T ss_pred             ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceee
Confidence            999999999 88999988642  2346899999999999999999999999999999999999975 6799999998865


Q ss_pred             CCC------CcccceeeeeceeEe
Q 024661          244 RHA------FSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~------~~~~~~~y~ape~~~  261 (264)
                      ...      ...++..|++||.+.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~pe~~~  178 (260)
T cd08222         155 LMGSCDLATTFTGTPYYMSPEALK  178 (260)
T ss_pred             cCCCcccccCCCCCcCccCHHHHc
Confidence            422      224667899999754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.93  E-value=8.6e-28  Score=207.43  Aligned_cols=163  Identities=27%  Similarity=0.357  Sum_probs=146.5

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      -.++|.++..+|+|.||.||+++++.+++..|+|+++.+. ....-+..|+-+++.++|+|+     +-+++.+-....+
T Consensus        13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~ni-----vay~gsylr~dkl   87 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNI-----VAYFGSYLRRDKL   87 (829)
T ss_pred             CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcCh-----HHHHhhhhhhcCc
Confidence            3467999999999999999999999999999999998654 334556679999999999998     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC---
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR---  244 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~---  244 (264)
                      |++|||| +|+|.+.-.-..  .+++.++..++++.+.+|+|||++|-+|||||-.|||+++.|.+||+|||.+..+   
T Consensus        88 wicMEycgggslQdiy~~Tg--plselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitat  165 (829)
T KOG0576|consen   88 WICMEYCGGGSLQDIYHVTG--PLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITAT  165 (829)
T ss_pred             EEEEEecCCCcccceeeecc--cchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhh
Confidence            9999999 889999876654  8999999999999999999999999999999999999999999999999988653   


Q ss_pred             ---CCCcccceeeeecee
Q 024661          245 ---HAFSFQTFLSMASRV  259 (264)
Q Consensus       245 ---~~~~~~~~~y~ape~  259 (264)
                         ..+..||++|||||+
T Consensus       166 i~KrksfiGtpywmapEv  183 (829)
T KOG0576|consen  166 IAKRKSFIGTPYWMAPEV  183 (829)
T ss_pred             hhhhhcccCCccccchhH
Confidence               346679999999997

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.93  E-value=7.3e-25  Score=170.90  Aligned_cols=138  Identities=19%  Similarity=0.116  Sum_probs=108.1

Q ss_pred             EeecccCccEEEEEEEeCCCCcEEEEEEEechhh---------------------------hHHHHHHHHHHHHHHhccC
Q 024661           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---------------------------YREAAMIEIDVLQRLARHD  149 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------------------------~~~~~~~e~~~l~~l~~~~  149 (264)
                      .+.||+|++|.||+|.+. +|+.||+|+++....                           .......|.+.+.++.+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05145           2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG   80 (190)
T ss_pred             CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            468999999999999987 899999999874311                           0123457899999999988


Q ss_pred             CCCcceEEEceeeeeCCEEEEEEecC-CCCHHH-HHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEE
Q 024661          150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYD-FLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENIL  226 (264)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~-~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~Nil  226 (264)
                      +..+....     ..  ..||||||+ |+++.. .+..   ..++...+..++.|++.+|.++|. +||+||||||+|||
T Consensus        81 i~~p~~~~-----~~--~~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIl  150 (190)
T cd05145          81 VPVPEPIL-----LK--KNVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNIL  150 (190)
T ss_pred             CCCceEEE-----ec--CCEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEE
Confidence            63333221     11  248999999 554433 3433   257888999999999999999999 99999999999999


Q ss_pred             eecCCcEEeccCCCCCcCCC
Q 024661          227 LVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       227 i~~~~~v~l~Dfg~a~~~~~  246 (264)
                      ++ ++.++|+|||+|.....
T Consensus       151 l~-~~~~~liDFG~a~~~~~  169 (190)
T cd05145         151 YH-DGKPYIIDVSQAVELDH  169 (190)
T ss_pred             EE-CCCEEEEEcccceecCC
Confidence            99 89999999999986544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.93  E-value=2.4e-26  Score=175.89  Aligned_cols=163  Identities=18%  Similarity=0.346  Sum_probs=137.0

Q ss_pred             CCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHh-ccCCCCcceEEEceeeee-
Q 024661           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDY-  164 (264)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~-  164 (264)
                      .....++|++.+++|+|.|+.||.|....+++.++||+++.-+  ...+.+|+.+|+.+. |+|+     +.+++...+ 
T Consensus        33 ~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk--kkKIkREikIL~nL~gg~NI-----i~L~DiV~Dp  105 (338)
T KOG0668|consen   33 DWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK--KKKIKREIKILQNLRGGPNI-----IKLLDIVKDP  105 (338)
T ss_pred             eccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH--HHHHHHHHHHHHhccCCCCe-----eehhhhhcCc
Confidence            3345578999999999999999999999999999999997433  366889999999998 6666     999999877 


Q ss_pred             -CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC-CcEEeccCCCC
Q 024661          165 -RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA-EYVKVPDYKVP  241 (264)
Q Consensus       165 -~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~-~~v~l~Dfg~a  241 (264)
                       .....|++|++ +.+...+..     .++...++.++.|++.||.|+|++||.|||+||.|++|+.. ..++|+|+|+|
T Consensus       106 ~SktpaLiFE~v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLA  180 (338)
T KOG0668|consen  106 ESKTPSLIFEYVNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLA  180 (338)
T ss_pred             cccCchhHhhhhccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchH
Confidence             45688999999 666555432     57788899999999999999999999999999999999965 58999999999


Q ss_pred             CcCCCCc-----ccceeeeeceeEe
Q 024661          242 SPRHAFS-----FQTFLSMASRVYI  261 (264)
Q Consensus       242 ~~~~~~~-----~~~~~y~ape~~~  261 (264)
                      ...++..     ..+.+|-+||++.
T Consensus       181 EFYHp~~eYnVRVASRyfKGPELLV  205 (338)
T KOG0668|consen  181 EFYHPGKEYNVRVASRYFKGPELLV  205 (338)
T ss_pred             hhcCCCceeeeeeehhhcCCchhee
Confidence            8876643     2456788999875

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.92  E-value=1.3e-24  Score=174.60  Aligned_cols=162  Identities=25%  Similarity=0.340  Sum_probs=136.6

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      .++-.|+++++||+|+||.++.|...-+++.||||.-. .+....++..|.+..+.|.+.    +.|.+++.+.+...+-
T Consensus        25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEP-rkS~APQLrdEYr~YKlL~g~----~GIP~vYYFGqeG~~N   99 (449)
T KOG1165|consen   25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEP-RKSEAPQLRDEYRTYKLLGGT----EGIPQVYYFGQEGKYN   99 (449)
T ss_pred             EecccceeccccccCcceeeecccccccCceEEEEecc-ccCCcchHHHHHHHHHHHcCC----CCCCceeeeccccchh
Confidence            34567999999999999999999999999999999643 345556788899999999864    3447888777888889


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC-----cEEeccCCCCCc
Q 024661          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE-----YVKVPDYKVPSP  243 (264)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~-----~v~l~Dfg~a~~  243 (264)
                      .||||++|.+|.|++.-.. ..|+.+.+..++.|++.-++|+|++.+|.|||||+|+||+..+     .+.++|||+|..
T Consensus       100 iLVidLLGPSLEDLFD~Cg-R~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~  178 (449)
T KOG1165|consen  100 ILVIDLLGPSLEDLFDLCG-RRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE  178 (449)
T ss_pred             hhhhhhhCcCHHHHHHHhc-CcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence            9999999999999988654 6799999999999999999999999999999999999998654     688999999974


Q ss_pred             C-------------CCCcccceeeee
Q 024661          244 R-------------HAFSFQTFLSMA  256 (264)
Q Consensus       244 ~-------------~~~~~~~~~y~a  256 (264)
                      .             +.+-.||..||+
T Consensus       179 YrDp~TkqHIPYrE~KSLsGTARYMS  204 (449)
T KOG1165|consen  179 YRDPKTKQHIPYREHKSLSGTARYMS  204 (449)
T ss_pred             hcCccccccCccccccccccceeeeE
Confidence            2             123347777875

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.92  E-value=5.3e-26  Score=177.88  Aligned_cols=165  Identities=22%  Similarity=0.259  Sum_probs=137.4

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEce-eeeeCCE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRN-WFDYRNH  167 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~-~~~~~~~  167 (264)
                      .+.+.|.+.+.||+|.||.+.+|+++.++..+++|.+.+......+|.+|...--.|.++    .+|+.-++ .|+..+.
T Consensus        21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H----~hIi~tY~vaFqt~d~   96 (378)
T KOG1345|consen   21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPH----QHIIDTYEVAFQTSDA   96 (378)
T ss_pred             chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccc----hhhhHHHHHHhhcCce
Confidence            455779999999999999999999999999999999988777788899998765556543    22355444 4788889


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec--CCcEEeccCCCCCcC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS--AEYVKVPDYKVPSPR  244 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~--~~~v~l~Dfg~a~~~  244 (264)
                      +++++||+ .|+|.+-+...   ++-|.....++.|+++|++|+|++++||||||.+||||-.  ..+|||||||.++..
T Consensus        97 YvF~qE~aP~gdL~snv~~~---GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~  173 (378)
T KOG1345|consen   97 YVFVQEFAPRGDLRSNVEAA---GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKV  173 (378)
T ss_pred             EEEeeccCccchhhhhcCcc---cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeeccccccc
Confidence            99999999 89999877764   5888999999999999999999999999999999999974  359999999999876


Q ss_pred             CCCcc---cceeeeeceeE
Q 024661          245 HAFSF---QTFLSMASRVY  260 (264)
Q Consensus       245 ~~~~~---~~~~y~ape~~  260 (264)
                      .....   .+..|.+||++
T Consensus       174 g~tV~~~~~~~~y~~pe~~  192 (378)
T KOG1345|consen  174 GTTVKYLEYVNNYHAPELC  192 (378)
T ss_pred             CceehhhhhhcccCCcHHH
Confidence            55433   34568888865

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.92  E-value=3.9e-25  Score=190.11  Aligned_cols=161  Identities=21%  Similarity=0.333  Sum_probs=137.3

Q ss_pred             CeEEEeecccCccEEEEEEEeCCC----CcEEEEEEEec--hhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEK----KELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~----~~~vaiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      ...+.+.||.|-||.||+|.+...    ...||||.-+.  .....+.|..|..+++.++|++|     +++++.+.. .
T Consensus       390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphI-----ikLIGv~~e-~  463 (974)
T KOG4257|consen  390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHI-----IKLIGVCVE-Q  463 (974)
T ss_pred             hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcch-----hheeeeeec-c
Confidence            345567899999999999987543    33588888764  23457889999999999999998     999998875 6


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      ..|||||++ -|.|..|++.++ ..++......++.||+.||.|||+..+|||||..+|||+.+..-|||+|||+++-..
T Consensus       464 P~WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~e  542 (974)
T KOG4257|consen  464 PMWIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLE  542 (974)
T ss_pred             ceeEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhcc
Confidence            789999999 999999999876 579999999999999999999999999999999999999999999999999999866


Q ss_pred             CCccc-------ceeeeeceeE
Q 024661          246 AFSFQ-------TFLSMASRVY  260 (264)
Q Consensus       246 ~~~~~-------~~~y~ape~~  260 (264)
                      ...+-       .-.|||||-+
T Consensus       543 d~~yYkaS~~kLPIKWmaPESI  564 (974)
T KOG4257|consen  543 DDAYYKASRGKLPIKWMAPESI  564 (974)
T ss_pred             ccchhhccccccceeecCcccc
Confidence            54432       1249999953

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.92  E-value=2.7e-25  Score=193.13  Aligned_cols=165  Identities=22%  Similarity=0.285  Sum_probs=140.9

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCC-C--cEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEK-K--ELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~-~--~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      +..++.++||+|.||.|++|.++.. |  ..||||.++..  .....+|.+|+.++..|+|+++     +++|+..-+ .
T Consensus       110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hl-----iRLyGvVl~-q  183 (1039)
T KOG0199|consen  110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHL-----IRLYGVVLD-Q  183 (1039)
T ss_pred             HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcce-----eEEeeeecc-c
Confidence            3467788999999999999998754 2  35999999743  3467899999999999999988     999999887 7


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      ...+|||++ .|+|.+.|.+.....|--..+..|+.||+.||.||..+++|||||..+|+|+.....|||+|||+.+...
T Consensus       184 p~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg  263 (1039)
T KOG0199|consen  184 PAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALG  263 (1039)
T ss_pred             hhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccC
Confidence            889999999 9999999998544568888899999999999999999999999999999999999999999999998755


Q ss_pred             CCc--c-------cceeeeeceeEee
Q 024661          246 AFS--F-------QTFLSMASRVYIC  262 (264)
Q Consensus       246 ~~~--~-------~~~~y~ape~~~~  262 (264)
                      ...  +       -.+.|+|||.++.
T Consensus       264 ~ned~Yvm~p~rkvPfAWCaPEsLrh  289 (1039)
T KOG0199|consen  264 ENEDMYVMAPQRKVPFAWCAPESLRH  289 (1039)
T ss_pred             CCCcceEecCCCcCcccccCHhHhcc
Confidence            422  1       1245999998753

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.91  E-value=1.3e-24  Score=187.45  Aligned_cols=161  Identities=26%  Similarity=0.382  Sum_probs=136.0

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeCCEE
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      +.+.|.+...+|.|+|+.|..+.+..+++..++|++.+..   .+..+|+.++... +|+|+     +...+.+.+..+.
T Consensus       320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~---~~~~~e~~~~~~~~~h~ni-----v~~~~v~~~~~~~  391 (612)
T KOG0603|consen  320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA---DDNQDEIPISLLVRDHPNI-----VKSHDVYEDGKEI  391 (612)
T ss_pred             cchhhccccccCCCCccceeeeeccccccchhheeccccc---cccccccchhhhhcCCCcc-----eeecceecCCcee
Confidence            4567999999999999999999999999999999998652   2334466555544 46666     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEe-ecCCcEEeccCCCCCcCCC
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL-VSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili-~~~~~v~l~Dfg~a~~~~~  246 (264)
                      |+|||.+ |+.+.+.+....  .+. ..+..|+.||+.|+.|||++||||||+||+|||+ ++.++++|+|||.+.....
T Consensus       392 ~~v~e~l~g~ell~ri~~~~--~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~  468 (612)
T KOG0603|consen  392 YLVMELLDGGELLRRIRSKP--EFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELER  468 (612)
T ss_pred             eeeehhccccHHHHHHHhcc--hhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCch
Confidence            9999999 887877777654  233 7788899999999999999999999999999999 5889999999999988766


Q ss_pred             C---cccceeeeeceeEe
Q 024661          247 F---SFQTFLSMASRVYI  261 (264)
Q Consensus       247 ~---~~~~~~y~ape~~~  261 (264)
                      .   .+-|..|.|||++.
T Consensus       469 ~~~tp~~t~~y~APEvl~  486 (612)
T KOG0603|consen  469 SCDTPALTLQYVAPEVLA  486 (612)
T ss_pred             hhcccchhhcccChhhhc
Confidence            5   35678899999875

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.91  E-value=8.6e-24  Score=168.53  Aligned_cols=160  Identities=34%  Similarity=0.536  Sum_probs=140.9

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh--hHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEE
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      |.+.+.||.|++|.||++....+++.+++|.+.....  ..+.+.+|++.++.+.|+++     +++++++......+++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i-----~~~~~~~~~~~~~~~v   75 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNI-----VKLYGVFEDPEPLYLV   75 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCh-----hhheeeeecCCceEEE
Confidence            5678899999999999999998899999999875432  46788889999999988877     8999999888999999


Q ss_pred             EecC-CCCHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC--
Q 024661          172 FEKL-GPSLYDFLRKNSYRS-FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF--  247 (264)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~--  247 (264)
                      +|++ +++|.+++....  . +++..+..++.+++.++.+||+++++|+||+++||+++.++.++|+|||.+......  
T Consensus        76 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~  153 (225)
T smart00221       76 MEYCEGGDLFDYLRKKG--GKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA  153 (225)
T ss_pred             EeccCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc
Confidence            9999 779999998765  3 889999999999999999999999999999999999999999999999998765433  


Q ss_pred             -----cccceeeeeceeE
Q 024661          248 -----SFQTFLSMASRVY  260 (264)
Q Consensus       248 -----~~~~~~y~ape~~  260 (264)
                           ..++..|++||.+
T Consensus       154 ~~~~~~~~~~~~~~pe~~  171 (225)
T smart00221      154 ALLKTVKGTPFYLAPEVL  171 (225)
T ss_pred             ccccceeccCCcCCHhHh
Confidence                 2466679999976

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.91  E-value=1.4e-23  Score=176.81  Aligned_cols=149  Identities=28%  Similarity=0.402  Sum_probs=127.5

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCC-cEEEEEEEechhh-hHHHHHHHHHHHHHHhccCCCCcceEEEceee-eeCCEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINK-YREAAMIEIDVLQRLARHDIGGTRCVQIRNWF-DYRNHIC  169 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~-~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~-~~~~~~~  169 (264)
                      +|.+.++||+|+||.||+|.+..++ ..+|+|+...... ....+..|+.++..+.. .....++..+++.. ..+.+.|
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~-~~~~~~~~~~~~~G~~~~~~~~   97 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEK-KNGPSHFPKLLDHGRSTEDFNF   97 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhh-hcCCCCCCEEEEeccCCCceeE
Confidence            7999999999999999999988775 6789998765422 22278889999999985 22224558888888 5788999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC-----CcEEeccCCCCC
Q 024661          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA-----EYVKVPDYKVPS  242 (264)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~-----~~v~l~Dfg~a~  242 (264)
                      +||+.+|.+|.++........++..++..++.|++.+|++||+.|++||||||+|++++..     ..+.|.|||+|+
T Consensus        98 iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar  175 (322)
T KOG1164|consen   98 IVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR  175 (322)
T ss_pred             EEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence            9999999999999876666789999999999999999999999999999999999999965     369999999998

>PRK10345 hypothetical protein; Provisional

Probab=99.91  E-value=3.4e-23  Score=162.65  Aligned_cols=139  Identities=20%  Similarity=0.198  Sum_probs=110.5

Q ss_pred             EeecccCccEEEEEEEeCCCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC---E-EEEE
Q 024661           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN---H-ICIV  171 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~---~-~~lv  171 (264)
                      .+.||+|+||.||.  +..++.. +||++... ....+.+.+|+.+++.+.|.+..++++++++++++++.   . +.+|
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I   83 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI   83 (210)
T ss_pred             cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence            56899999999995  5556555 68987643 23456789999999999887777788899999999863   4 4478


Q ss_pred             EecC---CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHH-HHHHHCCCeecCCCCCCEEeecC----CcEEecc-CCCCC
Q 024661          172 FEKL---GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV-AFMHELRLIHTDLKPENILLVSA----EYVKVPD-YKVPS  242 (264)
Q Consensus       172 ~e~~---~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l-~~lH~~~ivH~dikp~Nili~~~----~~v~l~D-fg~a~  242 (264)
                      |||.   +++|.+++.+.   .+++.  ..++.|++.++ +|||+++|+||||||+|||++..    ++++|+| ||...
T Consensus        84 ~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~  158 (210)
T PRK10345         84 ADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGEST  158 (210)
T ss_pred             ecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcc
Confidence            9995   58999999763   36665  35678888777 99999999999999999999843    3899999 55544


Q ss_pred             c
Q 024661          243 P  243 (264)
Q Consensus       243 ~  243 (264)
                      .
T Consensus       159 ~  159 (210)
T PRK10345        159 F  159 (210)
T ss_pred             e
Confidence            3

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.91  E-value=7.2e-24  Score=202.57  Aligned_cols=157  Identities=15%  Similarity=0.242  Sum_probs=131.0

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      ..|...+.||+|+||.||+|.+..++..||+|.++.....   ...|++.+++++|+|+     +++++++.+.+..|+|
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~l~~l~HpnI-----v~~~~~~~~~~~~~lv  761 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI---PSSEIADMGKLQHPNI-----VKLIGLCRSEKGAYLI  761 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc---cHHHHHHHhhCCCCCc-----ceEEEEEEcCCCCEEE
Confidence            3466778899999999999999999999999988643322   2346888999999888     9999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCCCCEEeecCCcEEeccCCCCCcC--C
Q 024661          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH---ELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR--H  245 (264)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~--~  245 (264)
                      |||+ +++|.+++.     .+++..+..++.||+.||+|||   +.+|+||||||+||+++.++..++. ||.+...  .
T Consensus       762 ~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~  835 (968)
T PLN00113        762 HEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD  835 (968)
T ss_pred             EeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC
Confidence            9999 999999995     3788999999999999999999   6699999999999999998887765 5554332  2


Q ss_pred             CCcccceeeeeceeEee
Q 024661          246 AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~~~~~~~~y~ape~~~~  262 (264)
                      ....++..|||||++.+
T Consensus       836 ~~~~~t~~y~aPE~~~~  852 (968)
T PLN00113        836 TKCFISSAYVAPETRET  852 (968)
T ss_pred             CCccccccccCcccccC
Confidence            23357789999998754

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.91  E-value=5.5e-23  Score=161.58  Aligned_cols=157  Identities=34%  Similarity=0.497  Sum_probs=137.5

Q ss_pred             cccCccEEEEEEEeCCCCcEEEEEEEechhh--hHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC-C
Q 024661          100 MGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-G  176 (264)
Q Consensus       100 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~  176 (264)
                      ||+|.+|.||++....+++.+++|++.....  ..+.+.+|++.++.+.|+++     +++++++......+++||++ +
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i-----~~~~~~~~~~~~~~~~~e~~~~   75 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNI-----VKLYGVFEDENHLYLVMEYCEG   75 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCe-----eeEeeeeecCCeEEEEEecCCC
Confidence            6899999999999988899999999875443  35778899999999998776     99999999999999999999 6


Q ss_pred             CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec-CCcEEeccCCCCCcCCCC------cc
Q 024661          177 PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS-AEYVKVPDYKVPSPRHAF------SF  249 (264)
Q Consensus       177 ~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~-~~~v~l~Dfg~a~~~~~~------~~  249 (264)
                      ++|.+++.... ..+++..++.++.+++.+|.+||+.|++|+||+|.||+++. ++.++|+|||.+......      ..
T Consensus        76 ~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~  154 (215)
T cd00180          76 GSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIV  154 (215)
T ss_pred             CcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhccc
Confidence            99999998752 35899999999999999999999999999999999999999 899999999999765433      34


Q ss_pred             cceeeeeceeEee
Q 024661          250 QTFLSMASRVYIC  262 (264)
Q Consensus       250 ~~~~y~ape~~~~  262 (264)
                      ....|++||.+.+
T Consensus       155 ~~~~~~~pe~~~~  167 (215)
T cd00180         155 GTPAYMAPEVLLG  167 (215)
T ss_pred             CCCCccChhHhcc
Confidence            6777999997644

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.90  E-value=9e-24  Score=186.73  Aligned_cols=159  Identities=21%  Similarity=0.217  Sum_probs=127.8

Q ss_pred             eEEEeecccCccEE-EEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHh-ccCCCCcceEEEceeeeeCCEEEEE
Q 024661           94 YRILSKMGEGTFGQ-VVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        94 y~~~~~lg~G~~g~-V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      |.-.+.+|.|+.|+ ||+|...  |+.||||.+-  ........+|+..|+.-. |+|+     +++++.-.+..+.||.
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll--~e~~~~A~rEi~lL~eSD~H~Nv-----iRyyc~E~d~qF~YIa  581 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVYE--GREVAVKRLL--EEFFDFAQREIQLLQESDEHPNV-----IRYYCSEQDRQFLYIA  581 (903)
T ss_pred             eccHHHcccCCCCcEEEEEeeC--CceehHHHHh--hHhHHHHHHHHHHHHhccCCCce-----EEEEeeccCCceEEEE
Confidence            44466788998865 8999875  7789999765  344456788999998875 4555     9999999999999999


Q ss_pred             EecCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec---C--CcEEeccCCCCCcC
Q 024661          172 FEKLGPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS---A--EYVKVPDYKVPSPR  244 (264)
Q Consensus       172 ~e~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~---~--~~v~l~Dfg~a~~~  244 (264)
                      .|+|..+|.+++...  ..........+.++.|+++||++||+.+||||||||.||||..   +  .+++|+|||++...
T Consensus       582 lELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl  661 (903)
T KOG1027|consen  582 LELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL  661 (903)
T ss_pred             ehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence            999999999999974  1111111346788999999999999999999999999999997   3  37899999999874


Q ss_pred             CC---------CcccceeeeeceeEe
Q 024661          245 HA---------FSFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~~---------~~~~~~~y~ape~~~  261 (264)
                      ..         ...||..|+|||.+.
T Consensus       662 ~~~~sS~~r~s~~sGt~GW~APE~L~  687 (903)
T KOG1027|consen  662 AGGKSSFSRLSGGSGTSGWQAPEQLR  687 (903)
T ss_pred             CCCcchhhcccCCCCcccccCHHHHh
Confidence            33         334889999999875

>smart00090 RIO RIO-like kinase

Probab=99.89  E-value=7.1e-23  Score=164.52  Aligned_cols=142  Identities=23%  Similarity=0.127  Sum_probs=110.4

Q ss_pred             CeEEEeecccCccEEEEEEE-eCCCCcEEEEEEEechhh-------------------------hHHHHHHHHHHHHHHh
Q 024661           93 RYRILSKMGEGTFGQVVECF-DNEKKELVAIKIVRSINK-------------------------YREAAMIEIDVLQRLA  146 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~-------------------------~~~~~~~e~~~l~~l~  146 (264)
                      -|.+.+.||.|++|.||+|. +..+|+.||+|+++....                         ....+.+|+.+++++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            38899999999999999998 667899999999874321                         1123568999999998


Q ss_pred             ccCCCCcceEEEceeeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCCCC
Q 024661          147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR-LIHTDLKPEN  224 (264)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivH~dikp~N  224 (264)
                      +..+..   ..+++   . ...++||||+ +.+|........  .+....+..++.||+.+|.+||++| |+|+||||+|
T Consensus       109 ~~~i~~---p~~~~---~-~~~~lV~E~~~g~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~N  179 (237)
T smart00090      109 EAGVPV---PKPIA---W-RRNVLVMEFIGGDGLPAPRLKDV--EPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYN  179 (237)
T ss_pred             hcCCCC---CeeeE---e-cCceEEEEEecCCcccccccccC--CcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhh
Confidence            754311   23332   2 2348999999 656665543322  4666677899999999999999999 9999999999


Q ss_pred             EEeecCCcEEeccCCCCCcC
Q 024661          225 ILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       225 ili~~~~~v~l~Dfg~a~~~  244 (264)
                      |+++ +++++|+|||.|...
T Consensus       180 Ili~-~~~i~LiDFg~a~~~  198 (237)
T smart00090      180 ILVH-DGKVVIIDVSQSVEL  198 (237)
T ss_pred             EEEE-CCCEEEEEChhhhcc
Confidence            9999 889999999998753

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.89  E-value=7.6e-23  Score=164.60  Aligned_cols=151  Identities=32%  Similarity=0.506  Sum_probs=132.5

Q ss_pred             ccEEEEEEEeCCCCcEEEEEEEechhhh--HHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC-CCCHH
Q 024661          104 TFGQVVECFDNEKKELVAIKIVRSINKY--REAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLY  180 (264)
Q Consensus       104 ~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~  180 (264)
                      +||.||+|.+..+++.+++|++......  .+.+.+|++.++.++|+++     +++.+.+......+++||++ +++|.
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i-----~~~~~~~~~~~~~~l~~e~~~~~~L~   75 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNI-----VRLYDVFEDEDKLYLVMEYCDGGDLF   75 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcH-----HHHHhheeeCCEEEEEEeCCCCCCHH
Confidence            5899999999988999999998754322  5788899999999988887     99999999999999999999 66999


Q ss_pred             HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-----Ccccceeee
Q 024661          181 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-----FSFQTFLSM  255 (264)
Q Consensus       181 ~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-----~~~~~~~y~  255 (264)
                      +++....  .+++..++.++.+++.++.+||+.+++|+||+|+||+++.++.++|+|||.+.....     ...++..|+
T Consensus        76 ~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~  153 (244)
T smart00220       76 DLLKKRG--RLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYM  153 (244)
T ss_pred             HHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCC
Confidence            9998754  489999999999999999999999999999999999999999999999999976544     245677899


Q ss_pred             eceeEe
Q 024661          256 ASRVYI  261 (264)
Q Consensus       256 ape~~~  261 (264)
                      +||.+.
T Consensus       154 ~pE~~~  159 (244)
T smart00220      154 APEVLL  159 (244)
T ss_pred             CHHHHc
Confidence            999753

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.89  E-value=8.6e-24  Score=168.81  Aligned_cols=164  Identities=23%  Similarity=0.324  Sum_probs=141.3

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee--
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--  164 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~--  164 (264)
                      ...||.-+..+|.|.- .|.-|.+.-+++.|++|..-..   .....+..+|..++..+.|.|+     ++++.+|.-  
T Consensus        15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~ni-----i~l~n~ftP~~   88 (369)
T KOG0665|consen   15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNI-----ISLLNVFTPQK   88 (369)
T ss_pred             eeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccce-----eeeeeccCccc
Confidence            3467888999999998 8888999999999999976532   2334667889999999999998     999988854  


Q ss_pred             ----CCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCC
Q 024661          165 ----RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV  240 (264)
Q Consensus       165 ----~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~  240 (264)
                          ...+|+|||++..+|...+..    .++.+.+..++.|++.|+.|||+.||+||||||+||++..++.+||.|||+
T Consensus        89 ~l~~~~e~y~v~e~m~~nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~  164 (369)
T KOG0665|consen   89 TLEEFQEVYLVMELMDANLCQVILM----ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGL  164 (369)
T ss_pred             cHHHHHhHHHHHHhhhhHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchh
Confidence                246899999999999998873    588899999999999999999999999999999999999999999999999


Q ss_pred             CCcCCCC-----cccceeeeeceeEeec
Q 024661          241 PSPRHAF-----SFQTFLSMASRVYICI  263 (264)
Q Consensus       241 a~~~~~~-----~~~~~~y~ape~~~~~  263 (264)
                      |+.....     ...|.+|-|||++.++
T Consensus       165 ar~e~~~~~mtpyVvtRyyrapevil~~  192 (369)
T KOG0665|consen  165 ARTEDTDFMMTPYVVTRYYRAPEVILGM  192 (369)
T ss_pred             hcccCcccccCchhheeeccCchheecc
Confidence            9876554     2467789999999876

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.88  E-value=7.6e-22  Score=155.73  Aligned_cols=139  Identities=12%  Similarity=0.143  Sum_probs=109.8

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh----hHHH------HHHHHHHHHHHhccCCCCcceEE
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREA------AMIEIDVLQRLARHDIGGTRCVQ  157 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~------~~~e~~~l~~l~~~~~~~~~~~~  157 (264)
                      ..+.++|++.+.||.|+||.||++.+  ++..+++|+++....    ....      +.+|+..+.++.|+++     ..
T Consensus        27 ~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI-----~~   99 (232)
T PRK10359         27 DFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGL-----AS   99 (232)
T ss_pred             HHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCC-----Cc
Confidence            35678999999999999999999765  366799999974321    1122      5789999999999998     44


Q ss_pred             Eceeeee--------CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEee
Q 024661          158 IRNWFDY--------RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV  228 (264)
Q Consensus       158 ~~~~~~~--------~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~  228 (264)
                      +.+++..        .+..+|+|||+ |.+|.++.      .+++.    ...+++.+|..+|+.|++|||++|+||+++
T Consensus       100 ~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~------~~~~~----~~~~i~~~l~~lH~~gi~H~Dikp~Nili~  169 (232)
T PRK10359        100 LNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMP------EISED----VKAKIKASIESLHQHGMVSGDPHKGNFIVS  169 (232)
T ss_pred             ceEeeeecccccccccCCeEEEEEEECCccHHHhh------hccHH----HHHHHHHHHHHHHHcCCccCCCChHHEEEe
Confidence            4444332        35689999999 77898763      23332    356999999999999999999999999999


Q ss_pred             cCCcEEeccCCCCCcC
Q 024661          229 SAEYVKVPDYKVPSPR  244 (264)
Q Consensus       229 ~~~~v~l~Dfg~a~~~  244 (264)
                      .+| ++|+|||.+...
T Consensus       170 ~~g-i~liDfg~~~~~  184 (232)
T PRK10359        170 KNG-LRIIDLSGKRCT  184 (232)
T ss_pred             CCC-EEEEECCCcccc
Confidence            988 999999988654

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.87  E-value=7.5e-22  Score=178.64  Aligned_cols=165  Identities=21%  Similarity=0.352  Sum_probs=136.4

Q ss_pred             CCeEEEeecccCccEEEEEEEeCC-------CCcEEEEEEEech--hhhHHHHHHHHHHHHHHh-ccCCCCcceEEEcee
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNE-------KKELVAIKIVRSI--NKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNW  161 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~  161 (264)
                      ++..+.+.||+|.||.|++|....       ....||+|.++..  ....+.+..|+++++.+. |+|+     +.+.++
T Consensus       296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~ni-----v~llG~  370 (609)
T KOG0200|consen  296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNI-----VNLLGA  370 (609)
T ss_pred             hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcch-----hhheee
Confidence            334666799999999999997531       1456999988743  355788899999999987 5666     999999


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHHhcC------------C--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 024661          162 FDYRNHICIVFEKL-GPSLYDFLRKNS------------Y--RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENIL  226 (264)
Q Consensus       162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~------------~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nil  226 (264)
                      +..++.+++|+||+ .|+|.++++...            .  ..++....+.++.||+.|++||++.++|||||..+|||
T Consensus       371 ~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVL  450 (609)
T KOG0200|consen  371 CTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVL  450 (609)
T ss_pred             eccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEE
Confidence            99999999999999 999999998654            1  12888999999999999999999999999999999999


Q ss_pred             eecCCcEEeccCCCCCcCCCCcc-------c--ceeeeeceeEe
Q 024661          227 LVSAEYVKVPDYKVPSPRHAFSF-------Q--TFLSMASRVYI  261 (264)
Q Consensus       227 i~~~~~v~l~Dfg~a~~~~~~~~-------~--~~~y~ape~~~  261 (264)
                      +..+..+||+|||+|+.......       +  ...|||||.+.
T Consensus       451 i~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~  494 (609)
T KOG0200|consen  451 ITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLF  494 (609)
T ss_pred             ecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhc
Confidence            99999999999999986433221       1  23499999764

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.87  E-value=1.3e-22  Score=179.34  Aligned_cols=146  Identities=21%  Similarity=0.289  Sum_probs=129.2

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCc----EEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKE----LVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      .+..++||+|+||+||+|.+...|+    .||||++....  +...++.+|.-++..+.|+|+     +++++++.... 
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl-----~RLLgvc~~s~-  771 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNL-----LRLLGVCMLST-  771 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchH-----HHHhhhcccch-
Confidence            4456789999999999999976654    68899887543  446788999999999999998     99999987765 


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      +.||++|+ .|.|.++++.++ ..+-.+..+.|..||++||.|||++++|||||..+|+|+.+...+|+.|||+++....
T Consensus       772 ~qlvtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~  850 (1177)
T KOG1025|consen  772 LQLVTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAP  850 (1177)
T ss_pred             HHHHHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCc
Confidence            88999999 999999999876 4688899999999999999999999999999999999999999999999999987554

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.86  E-value=5e-21  Score=148.20  Aligned_cols=132  Identities=16%  Similarity=0.170  Sum_probs=102.0

Q ss_pred             EEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhh-----HHHHHHHHHHHHHHhcc-CCCCcceEEEceeeeeCCEE
Q 024661           95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY-----REAAMIEIDVLQRLARH-DIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        95 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~e~~~l~~l~~~-~~~~~~~~~~~~~~~~~~~~  168 (264)
                      .+...|++|+||+|+++..  .+..++.+.+......     ...+.+|+++|+++.|+ ++     +.++++    +..
T Consensus         5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~v-----P~ll~~----~~~   73 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRT-----PRLLHW----DGR   73 (218)
T ss_pred             ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCC-----CEEEEE----cCE
Confidence            3467899999999998765  5667787766643332     23578899999999764 34     666654    346


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC-CCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL-KPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~di-kp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      |++|||+ |.+|.+.+..        . ...++.|++.+|.++|++||+|||| ||+|||++.++.++|+|||+|...+.
T Consensus        74 ~lvmeyI~G~~L~~~~~~--------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~  144 (218)
T PRK12274         74 HLDRSYLAGAAMYQRPPR--------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNP  144 (218)
T ss_pred             EEEEeeecCccHHhhhhh--------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCC
Confidence            9999999 8788654321        1 1357789999999999999999999 79999999999999999999985443

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.86  E-value=8.9e-21  Score=150.38  Aligned_cols=134  Identities=20%  Similarity=0.229  Sum_probs=108.6

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechh---------hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      +.||+|++|.||+|.+  .|..+++|+.....         .....+.+|+.++..+.++++..+     ..++.+....
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p-----~~~~~~~~~~   74 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVP-----AVYFVDPENF   74 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-----eEEEEeCCCC
Confidence            5799999999999987  56678999764211         123457789999999999887333     2334456678


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      +++|||+ |++|.+++....     . ....++.+++.+|.++|+.|++|+|++|+|||++ ++.++|+|||.+....
T Consensus        75 ~lv~e~~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~~  145 (211)
T PRK14879         75 IIVMEYIEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEFSK  145 (211)
T ss_pred             EEEEEEeCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccCCC
Confidence            9999999 889999987543     1 7788999999999999999999999999999999 8899999999987643

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.85  E-value=1.5e-20  Score=147.63  Aligned_cols=136  Identities=24%  Similarity=0.231  Sum_probs=105.9

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-----------------------hhHHHHHHHHHHHHHHhccCC
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----------------------KYREAAMIEIDVLQRLARHDI  150 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----------------------~~~~~~~~e~~~l~~l~~~~~  150 (264)
                      |.+.+.||.|+||.||++... +|+.+|+|++....                       ........|..++..+.+.++
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   95 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF   95 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence            888899999999999999874 78999999876321                       011235678899999988754


Q ss_pred             CCcceEEEceeeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec
Q 024661          151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS  229 (264)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~  229 (264)
                      .   +...++    ....++||||+ +++|.++...        .....++.+++.++.++|+.||+|+||+|+||+++.
T Consensus        96 ~---v~~~~~----~~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~  160 (198)
T cd05144          96 P---VPKPID----WNRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDD  160 (198)
T ss_pred             C---CCceee----cCCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcC
Confidence            2   123322    23458999999 7787664321        235678899999999999999999999999999999


Q ss_pred             CCcEEeccCCCCCcCC
Q 024661          230 AEYVKVPDYKVPSPRH  245 (264)
Q Consensus       230 ~~~v~l~Dfg~a~~~~  245 (264)
                      ++.++|+|||++....
T Consensus       161 ~~~~~liDfg~~~~~~  176 (198)
T cd05144         161 DEKIYIIDWPQMVSTD  176 (198)
T ss_pred             CCcEEEEECCccccCC
Confidence            9999999999996543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.85  E-value=1.3e-21  Score=161.54  Aligned_cols=144  Identities=24%  Similarity=0.454  Sum_probs=125.0

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCC---CCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNE---KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .+...|.+.++||.|.|+.||++.+..   ..+.||+|.+... .....+.+|+++|..+...    .+++.+.+++..+
T Consensus        33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t-s~p~ri~~El~~L~~~gG~----~ni~~~~~~~rnn  107 (418)
T KOG1167|consen   33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT-SSPSRILNELEMLYRLGGS----DNIIKLNGCFRNN  107 (418)
T ss_pred             hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc-cCchHHHHHHHHHHHhccc----hhhhcchhhhccC
Confidence            445679999999999999999999887   7889999988743 3345688999999999765    3459999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC-CcEEeccCCCCC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA-EYVKVPDYKVPS  242 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~-~~v~l~Dfg~a~  242 (264)
                      +.+.+||||+ ..+..++...     ++...+..++..++.||.++|.+|||||||||+|+|.+.. ++-.|+|||+|.
T Consensus       108 d~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~  181 (418)
T KOG1167|consen  108 DQVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQ  181 (418)
T ss_pred             CeeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHH
Confidence            9999999999 6777777654     6678899999999999999999999999999999999965 688999999986

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.85  E-value=3.4e-20  Score=145.72  Aligned_cols=130  Identities=19%  Similarity=0.180  Sum_probs=103.3

Q ss_pred             ecccCccEEEEEEEeCCCCcEEEEEEEechh---------hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           99 KMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        99 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      .||+|++|.||+|.+  .+..+++|......         .....+.+|+++++.+.++++..+.+     ++.+.+..+
T Consensus         1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~-----~~~~~~~~~   73 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVV-----YDVDPDNKT   73 (199)
T ss_pred             CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE-----EEEECCCCE
Confidence            489999999999985  46779999854211         12356678999999999887633322     233456678


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      ++|||+ |++|.+++....   .      .++.|++.+|.+||+.|++|+|++|+||+++ ++.++++|||++....
T Consensus        74 lv~e~~~g~~l~~~~~~~~---~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~~  140 (199)
T TIGR03724        74 IVMEYIEGKPLKDVIEEGN---D------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYSD  140 (199)
T ss_pred             EEEEEECCccHHHHHhhcH---H------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcCCC
Confidence            999999 899998876532   1      7889999999999999999999999999999 8999999999987644

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.84  E-value=4.4e-20  Score=165.50  Aligned_cols=144  Identities=20%  Similarity=0.177  Sum_probs=111.5

Q ss_pred             EeeCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEe-c---h-----hhhHHHHHHHHHHHHHHhccCCCCcc
Q 024661           84 FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR-S---I-----NKYREAAMIEIDVLQRLARHDIGGTR  154 (264)
Q Consensus        84 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~-~---~-----~~~~~~~~~e~~~l~~l~~~~~~~~~  154 (264)
                      +.........|...+.||+|+||.||+|.+....  +++|+.. +   .     ....+.+.+|+++++.++|+++    
T Consensus       325 ~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~--~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i----  398 (535)
T PRK09605        325 WIKEEEVKRRKIPDHLIGKGAEADIKKGEYLGRD--AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGV----  398 (535)
T ss_pred             eccccccccccCccceeccCCcEEEEEEeecCcc--ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCC----
Confidence            3444444555677899999999999999876443  3444321 1   1     1223567889999999999887    


Q ss_pred             eEEEceeeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcE
Q 024661          155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV  233 (264)
Q Consensus       155 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v  233 (264)
                       +....+..+....++||||+ +++|.+++.          ....++.|++.+|.+||+.|++||||||+|||+ .++.+
T Consensus       399 -~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~  466 (535)
T PRK09605        399 -PTPVIYDVDPEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRL  466 (535)
T ss_pred             -CeeEEEEEeCCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcE
Confidence             44444555566789999999 899998875          246689999999999999999999999999999 67899


Q ss_pred             EeccCCCCCcCC
Q 024661          234 KVPDYKVPSPRH  245 (264)
Q Consensus       234 ~l~Dfg~a~~~~  245 (264)
                      +|+|||+++...
T Consensus       467 ~liDFGla~~~~  478 (535)
T PRK09605        467 YLIDFGLGKYSD  478 (535)
T ss_pred             EEEeCcccccCC
Confidence            999999998644

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.82  E-value=5.7e-19  Score=147.71  Aligned_cols=161  Identities=33%  Similarity=0.466  Sum_probs=136.5

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh----hHHHHHHHHHHHHHHhcc-CCCCcceEEEceeeeeCCEE
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARH-DIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~-~~~~~~~~~~~~~~~~~~~~  168 (264)
                      |.+.+.||.|+||.||++.+.   ..+++|.+.....    ....+.+|+.+++.+.|+ ++     +.+.+.+......
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i-----~~~~~~~~~~~~~   73 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNI-----VKLYDFFQDEGSL   73 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcce-----eeEEEEEecCCEE
Confidence            788899999999999999987   6789998874332    467888999999999988 46     9999999888889


Q ss_pred             EEEEecC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC-cEEeccCCCCCcCC
Q 024661          169 CIVFEKL-GPSLYDFLRKNSY-RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE-YVKVPDYKVPSPRH  245 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~-~v~l~Dfg~a~~~~  245 (264)
                      +++++++ ++++.+++..... ..+.+..+..++.|++.++.|+|+.+++|||+||+||+++..+ .++++|||.+....
T Consensus        74 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~  153 (384)
T COG0515          74 YLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLP  153 (384)
T ss_pred             EEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecC
Confidence            9999999 8899977765421 1588999999999999999999999999999999999999988 79999999986322


Q ss_pred             ------------CCcccceeeeeceeEee
Q 024661          246 ------------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ------------~~~~~~~~y~ape~~~~  262 (264)
                                  ....++..|++||.+.+
T Consensus       154 ~~~~~~~~~~~~~~~~~t~~~~~pe~~~~  182 (384)
T COG0515         154 DPGSTSSIPALPSTSVGTPGYMAPEVLLG  182 (384)
T ss_pred             CCCccccccccccccccccccCCHHHhcC
Confidence                        34457889999997654

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.81  E-value=4e-19  Score=138.23  Aligned_cols=137  Identities=25%  Similarity=0.228  Sum_probs=97.6

Q ss_pred             EeecccCccEEEEEEEeCCCCcEEEEEEEechhhh----HH---------------------HHHHHHHHHHHHhccCCC
Q 024661           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY----RE---------------------AAMIEIDVLQRLARHDIG  151 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~---------------------~~~~e~~~l~~l~~~~~~  151 (264)
                      .+.||+|+||.||+|.+. +++.||+|+++.....    ..                     ....|...+..+.+..+.
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~   80 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP   80 (187)
T ss_pred             CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence            467999999999999976 7899999998743211    11                     113566667777665431


Q ss_pred             CcceEEEceeeeeCCEEEEEEecC-CCCHH-HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEee
Q 024661          152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLY-DFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLV  228 (264)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~-~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~Nili~  228 (264)
                         +...++.    ...++||||+ ++.+. ..+....   .. ..+..++.+++.++.++|. +||+|+||||+||+++
T Consensus        81 ---~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~  149 (187)
T cd05119          81 ---VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD  149 (187)
T ss_pred             ---CCceEec----CCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE
Confidence               1222222    2358999999 53322 1122111   11 5678899999999999999 9999999999999999


Q ss_pred             cCCcEEeccCCCCCcCCC
Q 024661          229 SAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       229 ~~~~v~l~Dfg~a~~~~~  246 (264)
                       ++.++|+|||.+.....
T Consensus       150 -~~~~~liDfg~a~~~~~  166 (187)
T cd05119         150 -DGKVYIIDVPQAVEIDH  166 (187)
T ss_pred             -CCcEEEEECcccccccC
Confidence             99999999999976544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.79  E-value=1.6e-19  Score=165.93  Aligned_cols=150  Identities=25%  Similarity=0.340  Sum_probs=114.0

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      .-+..|.|.+.||+|+||.||+|.... |+.||+|+-+...-  .++.-=.+++.+|+ +.. .+.+..+...+...+.-
T Consensus       695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~--WEfYI~~q~~~RLk-~~~-~~~~~~~~~a~~~~~~S  769 (974)
T KOG1166|consen  695 VGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNP--WEFYICLQVMERLK-PQM-LPSIMHISSAHVFQNAS  769 (974)
T ss_pred             ecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCc--eeeeehHHHHHhhc-hhh-hcchHHHHHHHccCCcc
Confidence            445679999999999999999999877 99999998653221  11111222333333 100 01124455555556777


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC-------CcEEeccCCC
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA-------EYVKVPDYKV  240 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~-------~~v~l~Dfg~  240 (264)
                      ++|+||. .|+|.+++...+  .+++..+..++.|++..+++||.++|||+||||+|+||...       .-++|+|||.
T Consensus       770 ~lv~ey~~~Gtlld~~N~~~--~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~  847 (974)
T KOG1166|consen  770 VLVSEYSPYGTLLDLINTNK--VMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGR  847 (974)
T ss_pred             eeeeeccccccHHHhhccCC--CCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEeccc
Confidence            8999999 999999999655  89999999999999999999999999999999999999743       3689999999


Q ss_pred             CCcCC
Q 024661          241 PSPRH  245 (264)
Q Consensus       241 a~~~~  245 (264)
                      +....
T Consensus       848 siDm~  852 (974)
T KOG1166|consen  848 SIDMK  852 (974)
T ss_pred             ceeee
Confidence            97643

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.78  E-value=7.7e-18  Score=135.61  Aligned_cols=135  Identities=18%  Similarity=0.152  Sum_probs=99.4

Q ss_pred             ecc-cCccEEEEEEEeCCCCcEEEEEEEechh--------------hhHHHHHHHHHHHHHHhccCCCCcceEEEceeee
Q 024661           99 KMG-EGTFGQVVECFDNEKKELVAIKIVRSIN--------------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        99 ~lg-~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~  163 (264)
                      .|| .|+.|+||.+...  +..+++|.+....              .....+.+|++++..+.+.++.-+   ..+++..
T Consensus        38 ~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP---~pl~~~~  112 (239)
T PRK01723         38 VVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVP---RPIAARV  112 (239)
T ss_pred             eeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCc---eeEeeee
Confidence            454 5666777777654  6778999775311              223567889999999999886333   3333322


Q ss_pred             e-CC---EEEEEEecC-C-CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEecc
Q 024661          164 Y-RN---HICIVFEKL-G-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  237 (264)
Q Consensus       164 ~-~~---~~~lv~e~~-~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~D  237 (264)
                      . ..   ..++|||++ | .+|.+++...   .+++..    +.||+.+|.+||++||+|+||||+|||++.++.++|+|
T Consensus       113 ~~~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LID  185 (239)
T PRK01723        113 VRHGLFYRADILIERIEGARDLVALLQEA---PLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLID  185 (239)
T ss_pred             eecCcceeeeEEEEecCCCCCHHHHHhcC---CCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEE
Confidence            2 22   236999999 5 5899888653   355543    57899999999999999999999999999999999999


Q ss_pred             CCCCCcCC
Q 024661          238 YKVPSPRH  245 (264)
Q Consensus       238 fg~a~~~~  245 (264)
                      ||.+....
T Consensus       186 fg~~~~~~  193 (239)
T PRK01723        186 FDRGELRT  193 (239)
T ss_pred             CCCcccCC
Confidence            99988754

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.77  E-value=5.3e-18  Score=126.78  Aligned_cols=136  Identities=23%  Similarity=0.255  Sum_probs=110.3

Q ss_pred             EEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC
Q 024661           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (264)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  175 (264)
                      +.+.||.|.++.||++....  ..+++|....... ...+..|+.+++.+.+.+   ..+++++.++...+..+++|||+
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~~---~~~p~~~~~~~~~~~~~~v~e~~   75 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-GADREREVAILQLLARKG---LPVPKVLASGESDGWSYLLMEWI   75 (155)
T ss_pred             cceecccccccceEEEEecC--CeEEEEecCCCCc-hhHHHHHHHHHHHHHHcC---CCCCeEEEEcCCCCccEEEEEec
Confidence            35689999999999999754  6799998865433 567888999999998862   23377777777778899999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL---RLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       176 -~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                       ++.+..+         +......++.+++.+|.++|..   +++|+|++|+||+++.++.++++|||.+.....
T Consensus        76 ~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~~  141 (155)
T cd05120          76 EGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGPP  141 (155)
T ss_pred             CCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCCCh
Confidence             6555543         4455677889999999999985   799999999999999999999999999876443

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.75  E-value=5.1e-19  Score=165.70  Aligned_cols=96  Identities=16%  Similarity=0.134  Sum_probs=77.4

Q ss_pred             CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec----------------
Q 024661          166 NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS----------------  229 (264)
Q Consensus       166 ~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~----------------  229 (264)
                      ..++++||+++++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+||||+.                
T Consensus        53 ~~~~~~~e~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~  131 (793)
T PLN00181         53 DSIVRALECEDVSLRQWLDNPD-RSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG  131 (793)
T ss_pred             chhhhhhccCCccHHHHHhccc-ccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCccc
Confidence            4678889999999999997543 46999999999999999999999999999999999999954                


Q ss_pred             ---CCcEEeccCCCCCcCCC----------------------CcccceeeeeceeEee
Q 024661          230 ---AEYVKVPDYKVPSPRHA----------------------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       230 ---~~~v~l~Dfg~a~~~~~----------------------~~~~~~~y~ape~~~~  262 (264)
                         ++.+|++|||+++....                      ...+|..|||||++.+
T Consensus       132 ~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~  189 (793)
T PLN00181        132 SDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNG  189 (793)
T ss_pred             ccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhcc
Confidence               44567777777653210                      1236778999998764

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.74  E-value=3.3e-18  Score=140.60  Aligned_cols=170  Identities=16%  Similarity=0.159  Sum_probs=132.1

Q ss_pred             CCccCCCeEEEeecccCccEEEEEEEeCCCC-----cEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEc
Q 024661           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKK-----ELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIR  159 (264)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-----~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~  159 (264)
                      ......|+++...+.+|.||.||.|.++...     +.+.+|.++..  ......+..|--.+..+.|+|+     ..+.
T Consensus       279 l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nl-----l~V~  353 (563)
T KOG1024|consen  279 LTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNL-----LSVL  353 (563)
T ss_pred             hhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCc-----ccee
Confidence            3455578999999999999999999876442     34556655432  2334556667777777778877     6666


Q ss_pred             eee-eeCCEEEEEEecC-CCCHHHHHHhc------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC
Q 024661          160 NWF-DYRNHICIVFEKL-GPSLYDFLRKN------SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (264)
Q Consensus       160 ~~~-~~~~~~~lv~e~~-~~~L~~~l~~~------~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~  231 (264)
                      +.. ++....++++.+. -|+|..++...      ..+.++..++..++.|++.|++|||+.||||.||..+|++|++.-
T Consensus       354 ~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~L  433 (563)
T KOG1024|consen  354 GVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQL  433 (563)
T ss_pred             EEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhhe
Confidence            654 3456788999999 78999999822      224577788999999999999999999999999999999999999


Q ss_pred             cEEeccCCCCCcCCCCcc--------cceeeeeceeEe
Q 024661          232 YVKVPDYKVPSPRHAFSF--------QTFLSMASRVYI  261 (264)
Q Consensus       232 ~v~l~Dfg~a~~~~~~~~--------~~~~y~ape~~~  261 (264)
                      +|||+|=.+++...+.++        ....||++|.+.
T Consensus       434 qVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~  471 (563)
T KOG1024|consen  434 QVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQ  471 (563)
T ss_pred             eEEeccchhccccCcccccccCCCCCCcccccCHHHHh
Confidence            999999999998665443        344699999753

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.69  E-value=1e-18  Score=151.38  Aligned_cols=158  Identities=20%  Similarity=0.271  Sum_probs=130.1

Q ss_pred             ecccCccEEEEEEEeC---CCCcEEEEEEEechh---hhHHHHHHHHHHHHHHh-ccCCCCcceEEEceeeeeCCEEEEE
Q 024661           99 KMGEGTFGQVVECFDN---EKKELVAIKIVRSIN---KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        99 ~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      .+|.|.||.|+++...   ..+..+++|++++..   ........|..++..++ ++.     ++.+...|+.+...+++
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f-----~v~lhyafqt~~kl~l~   75 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPF-----LVKLHYAFQTDGKLYLI   75 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCc-----eeeeeeeeccccchhHh
Confidence            3789999999987643   236678999886432   11224555777777777 444     49999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC--Cc
Q 024661          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA--FS  248 (264)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~--~~  248 (264)
                      +++. +|+|...+....  .+++.....+...++.+++++|+.+|+|||+|++||+++.+|++++.|||+++..-.  ..
T Consensus        76 ld~~rgg~lft~l~~~~--~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~  153 (612)
T KOG0603|consen   76 LDFLRGGDLFTRLSKEV--MFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA  153 (612)
T ss_pred             hhhcccchhhhccccCC--chHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc
Confidence            9999 889998887765  788999999999999999999999999999999999999999999999999976433  33


Q ss_pred             ccceeeeeceeEeec
Q 024661          249 FQTFLSMASRVYICI  263 (264)
Q Consensus       249 ~~~~~y~ape~~~~~  263 (264)
                      +||..|||||++.|.
T Consensus       154 cgt~eymApEI~~gh  168 (612)
T KOG0603|consen  154 CGTYEYRAPEIINGH  168 (612)
T ss_pred             ccchhhhhhHhhhcc
Confidence            779999999998753

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.69  E-value=1.5e-17  Score=149.43  Aligned_cols=161  Identities=20%  Similarity=0.220  Sum_probs=121.2

Q ss_pred             EEEeecccCccEEEEEEEeCCCCcEEEEEEEe----chh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        95 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~----~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      .....+|.|.+|.|+.+......+.+..|.+.    ...   .....+..|+-+-..+.|+++     +.....+.+...
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~-----~e~l~~~~~~~~  395 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNI-----IETLDIVQEIDG  395 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCch-----hhhHHHHhhccc
Confidence            45678999999988888776655555555433    111   122224556666666777765     666666665555


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC--
Q 024661          168 ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH--  245 (264)
Q Consensus       168 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~--  245 (264)
                      .+-.||||.++|+.++....  .++...+..++.|++.|+.|+|+.||.|||+|++|+++..+|.+||+|||.+....  
T Consensus       396 ~~~~mE~~~~Dlf~~~~~~~--~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~  473 (601)
T KOG0590|consen  396 ILQSMEYCPYDLFSLVMSNG--KLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYP  473 (601)
T ss_pred             chhhhhcccHHHHHHHhccc--ccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccC
Confidence            55559999339999998763  68889999999999999999999999999999999999999999999999986522  


Q ss_pred             --------CCcccceeeeeceeEee
Q 024661          246 --------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 --------~~~~~~~~y~ape~~~~  262 (264)
                              ....|...|+|||++..
T Consensus       474 ~e~~~~~~~g~~gS~pY~apE~~~~  498 (601)
T KOG0590|consen  474 WEKNIHESSGIVGSDPYLAPEVLTG  498 (601)
T ss_pred             cchhhhhhcCcccCCcCcCcccccc
Confidence                    23357788999998754

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.66  E-value=1e-16  Score=132.26  Aligned_cols=108  Identities=23%  Similarity=0.250  Sum_probs=87.9

Q ss_pred             CCcceEEEceeeee---------------------------CCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHH
Q 024661          151 GGTRCVQIRNWFDY---------------------------RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQL  203 (264)
Q Consensus       151 ~~~~~~~~~~~~~~---------------------------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi  203 (264)
                      .|+|++++..+|.+                           ...+|+||..+..+|.+++..+.   .+......++.|+
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~---~s~r~~~~~laQl  350 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRH---RSYRTGRVILAQL  350 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCC---CchHHHHHHHHHH
Confidence            57788999988854                           23589999999999999998764   7778888999999


Q ss_pred             HHHHHHHHHCCCeecCCCCCCEEeecCC----cEEeccCCCCCcCCC------------CcccceeeeeceeEe
Q 024661          204 LESVAFMHELRLIHTDLKPENILLVSAE----YVKVPDYKVPSPRHA------------FSFQTFLSMASRVYI  261 (264)
Q Consensus       204 ~~~l~~lH~~~ivH~dikp~Nili~~~~----~v~l~Dfg~a~~~~~------------~~~~~~~y~ape~~~  261 (264)
                      ++|+.|||.+||.|||+|.+|||+.-+.    .+.|+|||++-....            +.-|...-||||+..
T Consensus       351 LEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~t  424 (598)
T KOG4158|consen  351 LEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIAT  424 (598)
T ss_pred             HHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhh
Confidence            9999999999999999999999997543    678999998854222            112455689999864

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.66  E-value=2.8e-15  Score=115.96  Aligned_cols=137  Identities=18%  Similarity=0.180  Sum_probs=100.4

Q ss_pred             EeecccCccEEEEEEEeCC------CCcEEEEEEEech-----------------------hhhHHHHH----HHHHHHH
Q 024661           97 LSKMGEGTFGQVVECFDNE------KKELVAIKIVRSI-----------------------NKYREAAM----IEIDVLQ  143 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~------~~~~vaiK~~~~~-----------------------~~~~~~~~----~e~~~l~  143 (264)
                      ...||.|.-+.||.|....      .+..+|+|+.+..                       ......+.    +|...|+
T Consensus         2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~   81 (197)
T cd05146           2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK   81 (197)
T ss_pred             CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence            3579999999999998643      3578999987410                       01122333    7999999


Q ss_pred             HHhccCCCCcceEEEceeeeeCCEEEEEEecCCCC-HH-HHHHhcCCCCCCHHHHHHHHHHHHHHHHHH-HHCCCeecCC
Q 024661          144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPS-LY-DFLRKNSYRSFPIDLVRELGRQLLESVAFM-HELRLIHTDL  220 (264)
Q Consensus       144 ~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~-L~-~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l-H~~~ivH~di  220 (264)
                      ++...+++-|..+.   +    ..-+|||||++++ +. ..++..   .++++.+..+..|++.+|..| |+.|+||+||
T Consensus        82 rl~~~Gv~vP~pi~---~----~~~~lvME~Ig~~~~~~~~Lkd~---~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDL  151 (197)
T cd05146          82 RMQKAGIPCPEVVV---L----KKHVLVMSFIGDDQVPAPKLKDA---KLNDEEMKNAYYQVLSMMKQLYKECNLVHADL  151 (197)
T ss_pred             HHHHcCCCCCeEEE---e----cCCEEEEEEcCCCCccchhhhcc---ccCHHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence            99988765444442   2    4568999999543 32 122221   355666778889999999998 8999999999


Q ss_pred             CCCCEEeecCCcEEeccCCCCCcC
Q 024661          221 KPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       221 kp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      ++.|||+. ++.+.|+|||.|...
T Consensus       152 s~~NIL~~-~~~v~iIDF~qav~~  174 (197)
T cd05146         152 SEYNMLWH-DGKVWFIDVSQSVEP  174 (197)
T ss_pred             CHHHEEEE-CCcEEEEECCCceeC
Confidence            99999997 578999999988654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.66  E-value=1.2e-15  Score=132.95  Aligned_cols=143  Identities=16%  Similarity=0.189  Sum_probs=96.8

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechhh-----------------------------------hH------HHHH
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-----------------------------------YR------EAAM  136 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----------------------------------~~------~~~~  136 (264)
                      +.||.|++|.||+|+.. +|+.||||+.+..-.                                   ..      -++.
T Consensus       123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~  201 (437)
T TIGR01982       123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR  201 (437)
T ss_pred             cceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence            56999999999999864 689999999853210                                   00      0233


Q ss_pred             HHHHHHHHHhccCCCCcceEEEceee-eeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHH-HHHHHHHC
Q 024661          137 IEIDVLQRLARHDIGGTRCVQIRNWF-DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE-SVAFMHEL  213 (264)
Q Consensus       137 ~e~~~l~~l~~~~~~~~~~~~~~~~~-~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~-~l~~lH~~  213 (264)
                      +|...+.++....- +...+.+...+ ......+|||||+ |++|.++..... ...+   ...++.+++. .+..+|..
T Consensus       202 ~Ea~n~~~~~~~~~-~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~---~~~ia~~~~~~~l~ql~~~  276 (437)
T TIGR01982       202 REAANASELGENFK-NDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE-AGLD---RKALAENLARSFLNQVLRD  276 (437)
T ss_pred             HHHHHHHHHHHhcC-CCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh-cCCC---HHHHHHHHHHHHHHHHHhC
Confidence            45555555543211 11113333333 2245579999999 888888765432 1222   2345555555 46789999


Q ss_pred             CCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          214 RLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       214 ~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      |++|+|++|.||+++.+++++|+|||++.....
T Consensus       277 g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       277 GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence            999999999999999999999999999976543

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.64  E-value=3.6e-16  Score=138.08  Aligned_cols=146  Identities=15%  Similarity=0.203  Sum_probs=95.7

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-----------------------------------hhHHHH-
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----------------------------------KYREAA-  135 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----------------------------------~~~~~~-  135 (264)
                      ..|+. +.||+|++|.||+|+.+.+|+.||||+++..-                                   ...+.+ 
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~  198 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH  198 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence            34666 78999999999999998889999999986321                                   111222 


Q ss_pred             -----HHHHHHHHHHhccCCCCcceEEEceeeee-CCEEEEEEecC-CCCHHHHHH--hcCC--CCCCHHHHHHHHHHHH
Q 024661          136 -----MIEIDVLQRLARHDIGGTRCVQIRNWFDY-RNHICIVFEKL-GPSLYDFLR--KNSY--RSFPIDLVRELGRQLL  204 (264)
Q Consensus       136 -----~~e~~~l~~l~~~~~~~~~~~~~~~~~~~-~~~~~lv~e~~-~~~L~~~l~--~~~~--~~~~~~~~~~i~~qi~  204 (264)
                           .+|...+.++... ..+...+.+...+.+ ....+|||||+ |+.+.++..  ..+.  ..+.+..+..++.|+ 
T Consensus       199 ~ElD~~~Ea~N~~~~~~~-f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-  276 (537)
T PRK04750        199 DELDLMREAANASQLRRN-FEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-  276 (537)
T ss_pred             HhhCHHHHHHHHHHHHHH-ccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-
Confidence                 3344444444321 112222444444433 56678999999 889987532  2210  013333344444444 


Q ss_pred             HHHHHHHHCCCeecCCCCCCEEeecCC----cEEeccCCCCCcCCC
Q 024661          205 ESVAFMHELRLIHTDLKPENILLVSAE----YVKVPDYKVPSPRHA  246 (264)
Q Consensus       205 ~~l~~lH~~~ivH~dikp~Nili~~~~----~v~l~Dfg~a~~~~~  246 (264)
                            ...|++|+|+||.||+++.++    +++++|||++.....
T Consensus       277 ------f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        277 ------FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             ------HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence                  469999999999999999988    999999999876543

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.62  E-value=4.2e-15  Score=113.62  Aligned_cols=130  Identities=17%  Similarity=0.140  Sum_probs=96.7

Q ss_pred             EeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC-
Q 024661           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-  175 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-  175 (264)
                      .+.|+.|.++.||+++..  +..+++|+.............|+.+++.+.+.++.    .+++.+..  ...++|||++ 
T Consensus         3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~----P~~~~~~~--~~~~lv~e~i~   74 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIG----PKLYYFDP--ETGVLITEFIE   74 (170)
T ss_pred             eeecCCcccCceEEEEEC--CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCC----CceEEEeC--CCCeEEEEecC
Confidence            457889999999999865  77899998765432234567899999999876541    33443332  3357999999 


Q ss_pred             CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-----eecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          176 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL-----IHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       176 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-----vH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      |.++.+.    .   .   ....+..+++.+|..||..++     +|+|++|.||+++ ++.++++|||.+....
T Consensus        75 G~~l~~~----~---~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~~  138 (170)
T cd05151          75 GSELLTE----D---F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMND  138 (170)
T ss_pred             CCccccc----c---c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccCCC
Confidence            6666542    0   1   113456799999999999885     9999999999999 7789999999987654

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.57  E-value=2.4e-14  Score=116.65  Aligned_cols=167  Identities=19%  Similarity=0.176  Sum_probs=100.5

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhc----------cC-CCCcceEEE
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLAR----------HD-IGGTRCVQI  158 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~----------~~-~~~~~~~~~  158 (264)
                      +...+.||.|+++.||.+++..|++.+++|++....    ..-+.+.+|......+.+          -. +...-++++
T Consensus        14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i   93 (288)
T PF14531_consen   14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI   93 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred             EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence            667889999999999999999999999999886322    223444444432222111          01 111112222


Q ss_pred             ce---eeeeC---C-----EEEEEEecCCCCHHHHHHh---cCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 024661          159 RN---WFDYR---N-----HICIVFEKLGPSLYDFLRK---NSYR--SFPIDLVRELGRQLLESVAFMHELRLIHTDLKP  222 (264)
Q Consensus       159 ~~---~~~~~---~-----~~~lv~e~~~~~L~~~l~~---~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp  222 (264)
                      .+   ++...   .     ..+++|+.+.++|.+++..   ....  .+.......+..|++..+++||..|+||+||+|
T Consensus        94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~  173 (288)
T PF14531_consen   94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKP  173 (288)
T ss_dssp             TTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SG
T ss_pred             cCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccce
Confidence            21   11111   1     3478999999999888652   2211  122223345568999999999999999999999


Q ss_pred             CCEEeecCCcEEeccCCCCCcCCCCc---ccceeeeeceeE
Q 024661          223 ENILLVSAEYVKVPDYKVPSPRHAFS---FQTFLSMASRVY  260 (264)
Q Consensus       223 ~Nili~~~~~v~l~Dfg~a~~~~~~~---~~~~~y~ape~~  260 (264)
                      +|++++.+|.++|+||+.........   ..+..|..||..
T Consensus       174 ~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~  214 (288)
T PF14531_consen  174 ENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELE  214 (288)
T ss_dssp             GGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHH
T ss_pred             eeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhh
Confidence            99999999999999998765433322   223447777754

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.56  E-value=1.6e-13  Score=102.80  Aligned_cols=142  Identities=23%  Similarity=0.175  Sum_probs=109.8

Q ss_pred             EEeecccCccEEEEEEEeCCCCcEEEEEEE-ec--------hhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIV-RS--------INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~-~~--------~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      .+..|.+|+-+.|+++.+.  |+..+||.= .+        ..-...+..+|.+.+.++..-.+..|.     -+|.+.+
T Consensus        11 ~l~likQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~-----l~~~D~~   83 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPR-----LIFIDTY   83 (229)
T ss_pred             cceeeeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCce-----EEEEecC
Confidence            4678889999999999775  777777742 11        224566778899999999887763332     2455667


Q ss_pred             EEEEEEecCCC--CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC---cEEeccCCCC
Q 024661          167 HICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE---YVKVPDYKVP  241 (264)
Q Consensus       167 ~~~lv~e~~~~--~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~---~v~l~Dfg~a  241 (264)
                      .-+|+|||+.|  ++.+++..........+....++.+|-+.+.-||.++|+|+||..+||++.+++   .+.|+|||++
T Consensus        84 ~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls  163 (229)
T KOG3087|consen   84 GGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLS  163 (229)
T ss_pred             CCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecch
Confidence            77899999965  899998876544444455578899999999999999999999999999998765   4589999998


Q ss_pred             CcC
Q 024661          242 SPR  244 (264)
Q Consensus       242 ~~~  244 (264)
                      ...
T Consensus       164 ~~s  166 (229)
T KOG3087|consen  164 SVS  166 (229)
T ss_pred             hcc
Confidence            653

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.55  E-value=1.1e-15  Score=139.65  Aligned_cols=159  Identities=19%  Similarity=0.271  Sum_probs=123.7

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      .|...+.||++.|=+|.+|++.+ |. |++|++-+..     ....+..+|++ ..-++++|+     +.+.-+...+..
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~-----lPfqk~~~t~kA   95 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNC-----LPFQKVLVTDKA   95 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcc-----cchHHHHHhhHH
Confidence            68889999999999999998754 33 8999886433     12223333444 555667776     766666677778


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC---
Q 024661          168 ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR---  244 (264)
Q Consensus       168 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~---  244 (264)
                      .|||-+|+..+|+|.+..+.  -+..-+.+.|+.|++.||.-+|..||+|||||.+||||++=+-+.|+||..-++.   
T Consensus        96 AylvRqyvkhnLyDRlSTRP--FL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLP  173 (1431)
T KOG1240|consen   96 AYLVRQYVKHNLYDRLSTRP--FLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLP  173 (1431)
T ss_pred             HHHHHHHHhhhhhhhhccch--HHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCC
Confidence            89999999999999998876  5777788899999999999999999999999999999999999999999865431   


Q ss_pred             --CC--------CcccceeeeeceeEe
Q 024661          245 --HA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       245 --~~--------~~~~~~~y~ape~~~  261 (264)
                        ++        .+-+-..|+|||-|.
T Consensus       174 eDNPadf~fFFDTSrRRtCYiAPERFv  200 (1431)
T KOG1240|consen  174 EDNPADFTFFFDTSRRRTCYIAPERFV  200 (1431)
T ss_pred             CCCcccceEEEecCCceeeecChHhhh
Confidence              11        112334699999764

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.49  E-value=1e-12  Score=98.76  Aligned_cols=131  Identities=18%  Similarity=0.141  Sum_probs=96.9

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEE-ec--------hhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIV-RS--------INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~-~~--------~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ..+++|+-+.+|.+.+.  |..+++|.= .+        .+-......+|..++..+....+..|.     -+..+.+..
T Consensus         2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~-----v~dvD~~~~   74 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPI-----VYDVDPDNG   74 (204)
T ss_pred             chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCe-----EEEEcCCCC
Confidence            35788999999998664  444666632 21        123446677899999999888763332     233456677


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      .|+|||+ |..|.+++....         ..++..+-..+.-||..||+|+||.++||++..++ +.++|||++....
T Consensus        75 ~I~me~I~G~~lkd~l~~~~---------~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s~  142 (204)
T COG3642          75 LIVMEYIEGELLKDALEEAR---------PDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFSD  142 (204)
T ss_pred             EEEEEEeCChhHHHHHHhcc---------hHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccccc
Confidence            8999999 666777887641         34567777888899999999999999999997655 9999999987543

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.42  E-value=3.1e-13  Score=103.85  Aligned_cols=77  Identities=23%  Similarity=0.148  Sum_probs=67.0

Q ss_pred             CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-Ccccceeee
Q 024661          177 PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-FSFQTFLSM  255 (264)
Q Consensus       177 ~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-~~~~~~~y~  255 (264)
                      |+|.+++...+ ..+++..++.++.||+.||.|||+++      ||+|||++.++.+++  ||++..... ...++..||
T Consensus         1 GsL~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~~~g~~~y~   71 (176)
T smart00750        1 VSLADILEVRG-RPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPEQSRVDPYFM   71 (176)
T ss_pred             CcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccccCCCccccc
Confidence            68999998653 36999999999999999999999998      999999999999999  999876433 346889999


Q ss_pred             eceeEee
Q 024661          256 ASRVYIC  262 (264)
Q Consensus       256 ape~~~~  262 (264)
                      |||++.+
T Consensus        72 aPE~~~~   78 (176)
T smart00750       72 APEVIQG   78 (176)
T ss_pred             ChHHhcC
Confidence            9998764

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.42  E-value=1.6e-12  Score=103.56  Aligned_cols=141  Identities=18%  Similarity=0.207  Sum_probs=100.2

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechhh--hHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC---CEEEEEE
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR---NHICIVF  172 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~---~~~~lv~  172 (264)
                      +.|+.|..+.+|++.... |+.+++|+......  ....+..|.++++.+.+.++..   .+++.+....   +..++||
T Consensus         4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~v---p~~~~~~~~~~~~~~~~~v~   79 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPV---PKVLALCEDPSVLGTPFYVM   79 (223)
T ss_pred             eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCC---CCEEEECCCCCccCCceEEE
Confidence            568999999999998643 57899998764332  3557788999999998865433   3334443332   3678999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---------------------------------------
Q 024661          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE---------------------------------------  212 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---------------------------------------  212 (264)
                      |++ |.++.+.+..   ..+++.....++.+++.+|..||+                                       
T Consensus        80 e~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (223)
T cd05154          80 ERVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPA  156 (223)
T ss_pred             EEeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHH
Confidence            999 6666554321   135555566666666666666663                                       


Q ss_pred             -----------------CCCeecCCCCCCEEeec--CCcEEeccCCCCCcCC
Q 024661          213 -----------------LRLIHTDLKPENILLVS--AEYVKVPDYKVPSPRH  245 (264)
Q Consensus       213 -----------------~~ivH~dikp~Nili~~--~~~v~l~Dfg~a~~~~  245 (264)
                                       ..++|+|+++.|||++.  ++.+.|+||+.+....
T Consensus       157 ~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g~  208 (223)
T cd05154         157 MERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLGD  208 (223)
T ss_pred             HHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccCC
Confidence                             24699999999999998  6678999999887644

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.41  E-value=1.6e-11  Score=100.13  Aligned_cols=134  Identities=19%  Similarity=0.083  Sum_probs=98.0

Q ss_pred             EEEEEeCCCCcEEEEEEEechh--h----------hHHHHHHHHHHHHHHhccCCCCcceEEEceeeee--CCEEEEEEe
Q 024661          108 VVECFDNEKKELVAIKIVRSIN--K----------YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--RNHICIVFE  173 (264)
Q Consensus       108 V~~~~~~~~~~~vaiK~~~~~~--~----------~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~--~~~~~lv~e  173 (264)
                      |.++..  .|+.+.+|......  .          ....+.+|...+..+...++..+..+-+...-.+  ...-++|||
T Consensus        38 vvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte  115 (268)
T PRK15123         38 TLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE  115 (268)
T ss_pred             EEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence            545543  36678888664221  1          1114789999999999888876655554321111  245789999


Q ss_pred             cCCC--CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec-------CCcEEeccCCCCCc
Q 024661          174 KLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS-------AEYVKVPDYKVPSP  243 (264)
Q Consensus       174 ~~~~--~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~-------~~~v~l~Dfg~a~~  243 (264)
                      ++++  +|.+++........+......++.+++..+.-||+.||+|+|+++.|||++.       +..+.|+||+.+..
T Consensus       116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             eCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            9943  7999886432234667778899999999999999999999999999999985       46899999998854

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.38  E-value=1.9e-13  Score=124.97  Aligned_cols=127  Identities=20%  Similarity=0.383  Sum_probs=90.3

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      .+|..++.|..|+||.||+++++.+.+.+|+| +++++.....      ++.....                    .+.|
T Consensus        83 ~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~lilRn------ilt~a~n--------------------pfvv  135 (1205)
T KOG0606|consen   83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNLILRN------ILTFAGN--------------------PFVV  135 (1205)
T ss_pred             cccceeEeeccCCCCceeeeeccccccchhhc-ccccchhhhc------cccccCC--------------------ccee
Confidence            45889999999999999999999999999995 4432221111      1111111                    1222


Q ss_pred             EecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc--------
Q 024661          172 FEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP--------  243 (264)
Q Consensus       172 ~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~--------  243 (264)
                           |+=...++..+  .+.-        +++.+++|||+-||+|||+||+|.+|+.-|++|++|||++..        
T Consensus       136 -----gDc~tllk~~g--~lPv--------dmvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn  200 (1205)
T KOG0606|consen  136 -----GDCATLLKNIG--PLPV--------DMVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN  200 (1205)
T ss_pred             -----chhhhhcccCC--CCcc--------hhhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence                 33333444333  2222        237889999999999999999999999999999999999864        


Q ss_pred             -------------CCCCcccceeeeeceeE
Q 024661          244 -------------RHAFSFQTFLSMASRVY  260 (264)
Q Consensus       244 -------------~~~~~~~~~~y~ape~~  260 (264)
                                   .....++|+.|+|||++
T Consensus       201 l~eg~I~k~t~Ef~dKqvcgTPeyiaPeVi  230 (1205)
T KOG0606|consen  201 LKEGHIEKDTHEFQDKQVCGTPEYIAPEVI  230 (1205)
T ss_pred             hhhcchHHHHHHhhhccccCCccccChhhh
Confidence                         12244789999999985

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.33  E-value=7.2e-12  Score=96.63  Aligned_cols=126  Identities=26%  Similarity=0.287  Sum_probs=81.4

Q ss_pred             EEEEEeCCCCcEEEEEEEech---------------------------hhhHHHHHHHHHHHHHHhccCCCCcceEEEce
Q 024661          108 VVECFDNEKKELVAIKIVRSI---------------------------NKYREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (264)
Q Consensus       108 V~~~~~~~~~~~vaiK~~~~~---------------------------~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~  160 (264)
                      ||.|.. ..|..+|+|+.+..                           ........+|.+.|+.+...++.-|   ..++
T Consensus         2 Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP---~p~~   77 (188)
T PF01163_consen    2 VYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVP---KPYD   77 (188)
T ss_dssp             EEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS-----EEE
T ss_pred             EEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCC---cEEE
Confidence            788875 45678999987410                           1123456779999999988765333   3333


Q ss_pred             eeeeCCEEEEEEecCC--CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH-HHHCCCeecCCCCCCEEeecCCcEEecc
Q 024661          161 WFDYRNHICIVFEKLG--PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF-MHELRLIHTDLKPENILLVSAEYVKVPD  237 (264)
Q Consensus       161 ~~~~~~~~~lv~e~~~--~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~-lH~~~ivH~dikp~Nili~~~~~v~l~D  237 (264)
                      +.    .-+|||||++  |.....+....   ++.+....++.+++..+.. +|..||+|+|+.+.|||++.+ .+.|+|
T Consensus        78 ~~----~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iID  149 (188)
T PF01163_consen   78 YN----RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIID  149 (188)
T ss_dssp             EE----TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--
T ss_pred             Ee----CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEe
Confidence            32    2379999996  64433344322   2234456678888886665 579999999999999999987 999999


Q ss_pred             CCCCCcCC
Q 024661          238 YKVPSPRH  245 (264)
Q Consensus       238 fg~a~~~~  245 (264)
                      ||.+....
T Consensus       150 f~qav~~~  157 (188)
T PF01163_consen  150 FGQAVDSS  157 (188)
T ss_dssp             GTTEEETT
T ss_pred             cCcceecC
Confidence            99886644

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PRK09902 hypothetical protein; Provisional

Probab=99.32  E-value=1.3e-10  Score=90.35  Aligned_cols=141  Identities=13%  Similarity=0.102  Sum_probs=107.6

Q ss_pred             cccCccEEEEEEEeCCCCcEEEEEEEech-------hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee--CCEEEE
Q 024661          100 MGEGTFGQVVECFDNEKKELVAIKIVRSI-------NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--RNHICI  170 (264)
Q Consensus       100 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~--~~~~~l  170 (264)
                      -|+|+-+.|+.....  |..+-+|.-...       ......+.+|+..++.+...+++-+..+ +.+.-..  ...-+|
T Consensus        26 ~~rgG~SgV~r~~~~--g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~L  102 (216)
T PRK09902         26 YRRNGMSGVQCVERN--GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALL  102 (216)
T ss_pred             cCCCCcceEEEEEeC--CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEE
Confidence            456888888887654  335777765310       2345788999999999999888655544 2222222  235789


Q ss_pred             EEecCC--CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCc--EEeccCCCCCc
Q 024661          171 VFEKLG--PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY--VKVPDYKVPSP  243 (264)
Q Consensus       171 v~e~~~--~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~--v~l~Dfg~a~~  243 (264)
                      |+|.++  .+|.+++.+....+.+......++.+++..+.-||+.|+.|+|+.+.||+++.++.  ++++||.-++.
T Consensus       103 VTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        103 VTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             EEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence            999995  68999987754445677778899999999999999999999999999999987777  99999998765

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.32  E-value=4.7e-12  Score=110.04  Aligned_cols=169  Identities=20%  Similarity=0.220  Sum_probs=131.5

Q ss_pred             ccCCCeEEEeeccc--CccEEEEEEEe--CCCCcEEEEEEEec---hhhhHHHHHHHHHHHHHHhccCCCCcceEEEcee
Q 024661           89 NLTPRYRILSKMGE--GTFGQVVECFD--NEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNW  161 (264)
Q Consensus        89 ~~~~~y~~~~~lg~--G~~g~V~~~~~--~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~  161 (264)
                      .+...+.+...+|.  |.+|.+|.+..  ..++..+|+|.-+.   .......-.+|+.....+.-    |.+.++.+..
T Consensus       111 ~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~----~~~~v~~~~~  186 (524)
T KOG0601|consen  111 FFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDS----HENPVRDSPA  186 (524)
T ss_pred             hhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCc----cccccccCcc
Confidence            44456778889999  99999999998  78888899997432   11223333445544444331    2344888889


Q ss_pred             eeeCCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHH----HHHHHHHCCCeecCCCCCCEEeecC-CcEEec
Q 024661          162 FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE----SVAFMHELRLIHTDLKPENILLVSA-EYVKVP  236 (264)
Q Consensus       162 ~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~----~l~~lH~~~ivH~dikp~Nili~~~-~~v~l~  236 (264)
                      ++..+..|+-+|+++.+|..+..... .-+....++.++.+...    ||.++|..+++|.|+||.||++..+ ...+++
T Consensus       187 ~e~~~~lfiqtE~~~~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~  265 (524)
T KOG0601|consen  187 WEGSGILFIQTELCGESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLT  265 (524)
T ss_pred             cccCCcceeeeccccchhHHhhhccc-ccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecC
Confidence            99999999999999999999887654 23777888999999999    9999999999999999999999999 899999


Q ss_pred             cCCCCCcCCCCc-----------ccceeeeeceeEee
Q 024661          237 DYKVPSPRHAFS-----------FQTFLSMASRVYIC  262 (264)
Q Consensus       237 Dfg~a~~~~~~~-----------~~~~~y~ape~~~~  262 (264)
                      |||+........           .+...|++||+.-+
T Consensus       266 df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~  302 (524)
T KOG0601|consen  266 DFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG  302 (524)
T ss_pred             CcceeEEccCCccccceeeeecCCCCceEeChhhhcc
Confidence            999987755433           34556999997643

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.27  E-value=2.3e-13  Score=122.63  Aligned_cols=165  Identities=17%  Similarity=0.211  Sum_probs=129.6

Q ss_pred             CeEEEeecccCccEEEEEEEeCCC-CcEEEEEEEech---hhhHHHHHHHHHHHHHHh-ccCCCCcceEEEceeeeeCCE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSI---NKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      .|.+.+.||.|+|+.|-....... ...++.|.+...   .........|..+-+.+. |.|+     +.+++...+...
T Consensus        21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~-----~~~~~~~~~~~~   95 (601)
T KOG0590|consen   21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNT-----VHMIEPSSSPRS   95 (601)
T ss_pred             cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccc-----cccCCccCCCcc
Confidence            377788899999999988876443 344666665432   233444455776666666 6666     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCCCCCEEeecCC-cEEeccCCCCCcC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAE-YVKVPDYKVPSPR  244 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~dikp~Nili~~~~-~v~l~Dfg~a~~~  244 (264)
                      .++++++. ++++.+-+........+...+-.++.|+..++.|+| ..++.|+||||+|.+++..+ .++++|||+|+..
T Consensus        96 ~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~  175 (601)
T KOG0590|consen   96 YLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAY  175 (601)
T ss_pred             cccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccc
Confidence            99999999 999998883222125667778889999999999999 99999999999999999999 9999999999764


Q ss_pred             CC---------Cccc-ceeeeeceeEee
Q 024661          245 HA---------FSFQ-TFLSMASRVYIC  262 (264)
Q Consensus       245 ~~---------~~~~-~~~y~ape~~~~  262 (264)
                      ..         ..+| ++.|+|||.+.+
T Consensus       176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~  203 (601)
T KOG0590|consen  176 RNKNGAERSLKDRCGSSPPYGAPEHLSG  203 (601)
T ss_pred             cccCCcceeeecccCCCCCCCCcccccc
Confidence            33         3357 888999998765

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.26  E-value=5.4e-13  Score=114.07  Aligned_cols=161  Identities=19%  Similarity=0.239  Sum_probs=108.3

Q ss_pred             eEEEeecccCccEEEEEEEeCCC---CcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEce---------
Q 024661           94 YRILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRN---------  160 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~---------  160 (264)
                      +.+.+..+..+++.+....-...   .+.+.-+..+... .......+++-.+....|++.     ..+.+         
T Consensus       246 ~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~-----s~~~d~~~s~~~~~  320 (516)
T KOG1033|consen  246 SSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNR-----SILEDLRPSLFESS  320 (516)
T ss_pred             ccccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCc-----ccccCCCCchhhhc
Confidence            44455555555555554432222   2333333333222 233344455555555566553     22222         


Q ss_pred             ---eeeeCCEEEEEEecC-CCCHHHHHHh-cCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEe
Q 024661          161 ---WFDYRNHICIVFEKL-GPSLYDFLRK-NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV  235 (264)
Q Consensus       161 ---~~~~~~~~~lv~e~~-~~~L~~~l~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l  235 (264)
                         ......++||.|++| ..+|.+++.. ......+......++.|++.|++|   +|.+|+|+||.||++..+..+||
T Consensus       321 ~~~~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kI  397 (516)
T KOG1033|consen  321 KRNKVGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKI  397 (516)
T ss_pred             cccccccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhh
Confidence               011134789999999 8999999973 334457778899999999999999   99999999999999999999999


Q ss_pred             ccCCCCCcC------------CCCcccceeeeeceeEee
Q 024661          236 PDYKVPSPR------------HAFSFQTFLSMASRVYIC  262 (264)
Q Consensus       236 ~Dfg~a~~~------------~~~~~~~~~y~ape~~~~  262 (264)
                      .|||+.+..            +....+|..||+||-+.+
T Consensus       398 gDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g  436 (516)
T KOG1033|consen  398 GDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRG  436 (516)
T ss_pred             hhhhheeecccCCcccchhhhhhhcccccccCCHHHHhh
Confidence            999998753            234468999999998764

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.24  E-value=6.8e-12  Score=108.79  Aligned_cols=114  Identities=18%  Similarity=0.204  Sum_probs=97.4

Q ss_pred             HHHhccCCCCcceEEEceeeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-eecCC
Q 024661          143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL-IHTDL  220 (264)
Q Consensus       143 ~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-vH~di  220 (264)
                      +.+.|.|+     .+|++.+.+....++|.+|| .|+|.+.+.... ..+++.....++++|+.||.|||...| .|+.+
T Consensus         2 ~~l~h~n~-----~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~-~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l   75 (484)
T KOG1023|consen    2 RQLDHDNL-----NKFIGASVDGPEMIVIWEYCSRGSLLDILSNED-IKLDYFFILSFIRDISKGLAYLHNSPIGYHGAL   75 (484)
T ss_pred             cccchhhh-----hhheeeEecCCceEEEEeeecCccHHhHHhccc-cCccHHHHHHHHHHHHHHHHHHhcCcceeeeee
Confidence            34556666     99999999999999999999 999999999744 578899999999999999999998765 99999


Q ss_pred             CCCCEEeecCCcEEeccCCCCCcCCC--------CcccceeeeeceeEee
Q 024661          221 KPENILLVSAEYVKVPDYKVPSPRHA--------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       221 kp~Nili~~~~~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~~  262 (264)
                      +..|++++....+||+|||+......        .......|.|||+++.
T Consensus        76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~  125 (484)
T KOG1023|consen   76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRG  125 (484)
T ss_pred             ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcc
Confidence            99999999999999999999887642        1123456999998875

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.23  E-value=1.2e-12  Score=103.65  Aligned_cols=160  Identities=13%  Similarity=0.171  Sum_probs=126.8

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEec---hhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      ...+..+|.+...|..|+|++.++.  ++.|+++.   .......|..|.-.|+.+.|||+     +.+++.+....++.
T Consensus       191 ~lnl~tkl~e~hsgelwrgrwqgnd--ivakil~vr~~t~risrdfneefp~lrifshpni-----lpvlgacnsppnlv  263 (448)
T KOG0195|consen  191 SLNLITKLAESHSGELWRGRWQGND--IVAKILNVREVTARISRDFNEEFPALRIFSHPNI-----LPVLGACNSPPNLV  263 (448)
T ss_pred             hhhhhhhhccCCCcccccccccCcc--hhhhhhhhhhcchhhcchhhhhCcceeeecCCch-----hhhhhhccCCCCce
Confidence            3556778999999999999987554  67777653   23455778889999999999998     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEeecCCcEEe--ccCCCCCcC
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKV--PDYKVPSPR  244 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dikp~Nili~~~~~v~l--~Dfg~a~~~  244 (264)
                      ++..|+ .|+|++.+........+..++.+++.+|+.|++|||+..  |.--.+....++||++-+.+|  +|--++.. 
T Consensus       264 ~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfq-  342 (448)
T KOG0195|consen  264 IISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ-  342 (448)
T ss_pred             EeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeee-
Confidence            999999 999999999877667888999999999999999999874  445578889999999977665  44333311 


Q ss_pred             CCCcccceeeeeceeE
Q 024661          245 HAFSFQTFLSMASRVY  260 (264)
Q Consensus       245 ~~~~~~~~~y~ape~~  260 (264)
                      .....-.+.||+||.+
T Consensus       343 e~gr~y~pawmspeal  358 (448)
T KOG0195|consen  343 EVGRAYSPAWMSPEAL  358 (448)
T ss_pred             ccccccCcccCCHHHH
Confidence            1222345679999964

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=99.23  E-value=8.7e-11  Score=93.61  Aligned_cols=136  Identities=29%  Similarity=0.342  Sum_probs=100.2

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEec----------h-------------hhhHHHHHHHHHHHHHHhccCC
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----------I-------------NKYREAAMIEIDVLQRLARHDI  150 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----------~-------------~~~~~~~~~e~~~l~~l~~~~~  150 (264)
                      +.++.+||-|.-+.||.|.+. .|..+++|+-+.          .             .-.+....+|.++|++|.....
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~  171 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV  171 (304)
T ss_pred             HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence            567889999999999999875 678899996421          0             1234556789999999977632


Q ss_pred             CCcceEEEceeeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec
Q 024661          151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS  229 (264)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~  229 (264)
                      .   +...+++    +.-.+|||++ |..|...       +++.+..-.++..|+.-+..+-..|+||+|+++-|||+++
T Consensus       172 ~---VP~P~~~----nRHaVvMe~ieG~eL~~~-------r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~  237 (304)
T COG0478         172 K---VPKPIAW----NRHAVVMEYIEGVELYRL-------RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTE  237 (304)
T ss_pred             C---CCCcccc----ccceeeeehcccceeecc-------cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEec
Confidence            1   1333322    5567999999 6555543       2234455566777777777777999999999999999999


Q ss_pred             CCcEEeccCCCCCcC
Q 024661          230 AEYVKVPDYKVPSPR  244 (264)
Q Consensus       230 ~~~v~l~Dfg~a~~~  244 (264)
                      +|.+.++||--+...
T Consensus       238 dg~~~vIDwPQ~v~~  252 (304)
T COG0478         238 DGDIVVIDWPQAVPI  252 (304)
T ss_pred             CCCEEEEeCcccccC
Confidence            999999999877653

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.17  E-value=5.1e-10  Score=88.28  Aligned_cols=112  Identities=28%  Similarity=0.270  Sum_probs=89.1

Q ss_pred             HHHHHHHHHHHHHHhccCCCCcceEEEceeeee-CCEEEEEEecC-C-CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Q 024661          132 REAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-RNHICIVFEKL-G-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA  208 (264)
Q Consensus       132 ~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~-~~~~~lv~e~~-~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~  208 (264)
                      .....+|...+..+...+++.+..+-+...-.. ...-++|+|++ + .+|.+++....  ..+......++.+++..+.
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~--~~~~~~~~~ll~~l~~~i~  132 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE--QLDPSQRRELLRALARLIA  132 (206)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc--ccchhhHHHHHHHHHHHHH
Confidence            456788999999999988866655554332111 13468999999 4 47999988744  3666778889999999999


Q ss_pred             HHHHCCCeecCCCCCCEEeecCC---cEEeccCCCCCcCC
Q 024661          209 FMHELRLIHTDLKPENILLVSAE---YVKVPDYKVPSPRH  245 (264)
Q Consensus       209 ~lH~~~ivH~dikp~Nili~~~~---~v~l~Dfg~a~~~~  245 (264)
                      -||++||+|+|+++.|||++.++   .+.|+||+-+....
T Consensus       133 ~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~  172 (206)
T PF06293_consen  133 KLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP  172 (206)
T ss_pred             HHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence            99999999999999999999887   89999999876544

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.17  E-value=1.5e-10  Score=102.00  Aligned_cols=142  Identities=15%  Similarity=0.189  Sum_probs=109.7

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh-hHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      |.+ ....-++.+..-.|..+.++..+.+.+++..+. ..+...+-+..++.++||+|     +++++.++.++.+|||+
T Consensus        15 Y~l-e~~~~~~~a~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~I-----l~yL~t~e~~~~~ylvT   88 (690)
T KOG1243|consen   15 YDL-EETAFSSEALWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNI-----LSYLDTTEEEGTLYLVT   88 (690)
T ss_pred             ccc-ccccCCCcccccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchh-----hhhhhhhcccCceEEEe
Confidence            444 344444443322466677788888888875443 33456777889999999998     99999999999999999


Q ss_pred             ecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC
Q 024661          173 EKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF  247 (264)
Q Consensus       173 e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~  247 (264)
                      |.+. .|..+++.     +....+...+.||+.||.||| +++++|++|.-+.|+++..|..||++|.++......
T Consensus        89 ErV~-Pl~~~lk~-----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~  158 (690)
T KOG1243|consen   89 ERVR-PLETVLKE-----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGF  158 (690)
T ss_pred             eccc-cHHHHHHH-----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccC
Confidence            9993 34445543     336677888999999999998 678999999999999999999999999887654443

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=99.08  E-value=4.2e-09  Score=83.27  Aligned_cols=137  Identities=18%  Similarity=0.135  Sum_probs=96.3

Q ss_pred             EeecccCccEEEEEEEeCCCCcEEEEEEEechhh-------------------------hHHHHHHHHHHHHHHhccCCC
Q 024661           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------------------------YREAAMIEIDVLQRLARHDIG  151 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------------------------~~~~~~~e~~~l~~l~~~~~~  151 (264)
                      ...|++|.-+.||+|.. ..+..+|+|+++....                         ...-...|+..|+++....+.
T Consensus        53 ~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVr  131 (268)
T COG1718          53 VGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVR  131 (268)
T ss_pred             EeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            34688888899999974 5678899999853211                         112234588889988877653


Q ss_pred             CcceEEEceeeeeCCEEEEEEecCCCCH--HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEee
Q 024661          152 GTRCVQIRNWFDYRNHICIVFEKLGPSL--YDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLV  228 (264)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~lv~e~~~~~L--~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~Nili~  228 (264)
                      -   .+-+.+.    ...|||||+|...  .-.|+.   ..+..+.+..+..++++.+.-|-. .++||+||+.-|||+.
T Consensus       132 v---P~Pi~~~----~nVLvMEfIg~~g~pAP~LkD---v~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~  201 (268)
T COG1718         132 V---PEPIAFR----NNVLVMEFIGDDGLPAPRLKD---VPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH  201 (268)
T ss_pred             C---CCceeec----CCeEEEEeccCCCCCCCCccc---CCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE
Confidence            2   2222222    3369999995541  111111   123444678888999999998876 8999999999999999


Q ss_pred             cCCcEEeccCCCCCcCC
Q 024661          229 SAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       229 ~~~~v~l~Dfg~a~~~~  245 (264)
                       ++.+.++|||-|....
T Consensus       202 -~~~p~iID~~QaV~~~  217 (268)
T COG1718         202 -DGEPYIIDVSQAVTID  217 (268)
T ss_pred             -CCeEEEEECccccccC
Confidence             9999999999887543

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=99.08  E-value=1.2e-09  Score=96.37  Aligned_cols=144  Identities=17%  Similarity=0.227  Sum_probs=94.6

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEech-----------------------------------hhhHHH------HH
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSI-----------------------------------NKYREA------AM  136 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----------------------------------~~~~~~------~~  136 (264)
                      +.|+.++-|.||+|+... |+.||||+.+..                                   ....+.      +.
T Consensus       131 ~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~  209 (517)
T COG0661         131 EPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR  209 (517)
T ss_pred             CchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence            468999999999999765 999999987410                                   011122      23


Q ss_pred             HHHHHHHHHhccCCCCcceEEEceee-eeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 024661          137 IEIDVLQRLARHDIGGTRCVQIRNWF-DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR  214 (264)
Q Consensus       137 ~e~~~l~~l~~~~~~~~~~~~~~~~~-~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  214 (264)
                      +|...+.++.+. .....-+.+...+ +..+.-.|+|||+ |..+.++..-.. ..++.+.+.....++.  +.-+-..|
T Consensus       210 ~EA~n~~~~~~n-f~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~ia~~~~~~f--~~q~~~dg  285 (517)
T COG0661         210 REAANAERFREN-FKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKELAELLVRAF--LRQLLRDG  285 (517)
T ss_pred             HHHHHHHHHHHH-cCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHHHHHHHHHHH--HHHHHhcC
Confidence            344444444432 2122223443333 4467779999999 777888744322 3566544433333322  33444689


Q ss_pred             CeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          215 LIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       215 ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      +.|.|.+|.||+++.+|++.+.|||+.....+
T Consensus       286 ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         286 FFHADPHPGNILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             ccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence            99999999999999999999999999876554

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=99.03  E-value=3.1e-09  Score=91.46  Aligned_cols=137  Identities=15%  Similarity=0.204  Sum_probs=109.6

Q ss_pred             cEEEEEEEeCCCCcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee----CCEEEEEEecC--CC
Q 024661          105 FGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY----RNHICIVFEKL--GP  177 (264)
Q Consensus       105 ~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~----~~~~~lv~e~~--~~  177 (264)
                      ..+.|++....+|..|++|.++... ........-++.++++.|.|+     |.+.+.|..    +..+++|++|.  .+
T Consensus       289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~Nv-----V~frevf~t~tF~D~SlvlvYDYyP~s~  363 (655)
T KOG3741|consen  289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNV-----VPFREVFLTYTFGDLSLVLVYDYYPSSP  363 (655)
T ss_pred             cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCce-----eehhhhhhhhccCcceEEEEEecCCCCc
Confidence            3578999999999999999995322 112223345788999999998     999888874    56789999999  57


Q ss_pred             CHHHHHHhc-------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          178 SLYDFLRKN-------------SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       178 ~L~~~l~~~-------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      +|.++.-..             .+...+|..+|.|+.|+..||.++|+.|+..+-|.+.+||++.+.+++|...|+....
T Consensus       364 TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl  443 (655)
T KOG3741|consen  364 TLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVL  443 (655)
T ss_pred             hHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeee
Confidence            888876432             1234678999999999999999999999999999999999998889999988877554


Q ss_pred             CC
Q 024661          245 HA  246 (264)
Q Consensus       245 ~~  246 (264)
                      ..
T Consensus       444 ~~  445 (655)
T KOG3741|consen  444 QE  445 (655)
T ss_pred             cC
Confidence            43

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=99.02  E-value=1.5e-08  Score=79.30  Aligned_cols=142  Identities=17%  Similarity=0.221  Sum_probs=92.5

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhH----------HHHHHHHHHHHHHhccCCCC---cce
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR----------EAAMIEIDVLQRLARHDIGG---TRC  155 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------~~~~~e~~~l~~l~~~~~~~---~~~  155 (264)
                      .+.+.|.+.+.+-......|.+..-  .|+.+++|..+......          ....+++..+..+...++..   +.+
T Consensus        28 i~~~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl  105 (229)
T PF06176_consen   28 ILDNNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYL  105 (229)
T ss_pred             HHhCCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccccee
Confidence            4557788888888877777766653  46779999776322111          12334455555554444311   122


Q ss_pred             EEEceeeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEE
Q 024661          156 VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK  234 (264)
Q Consensus       156 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~  234 (264)
                      +-..-.+......+++|||+ |..|.++..      +++.    +...+.+++.-||+.|+.|+|.+|.|++++.++ ++
T Consensus       106 ~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e~----~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~-i~  174 (229)
T PF06176_consen  106 AAEKKIFRYTSSYVLLMEYIEGVELNDIED------IDED----LAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG-IR  174 (229)
T ss_pred             eeeeeeccceeEEEEEEEEecCeecccchh------cCHH----HHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc-EE
Confidence            22222233345678999999 777766532      3332    445677889999999999999999999998554 99


Q ss_pred             eccCCCCCc
Q 024661          235 VPDYKVPSP  243 (264)
Q Consensus       235 l~Dfg~a~~  243 (264)
                      ++||+..+.
T Consensus       175 iID~~~k~~  183 (229)
T PF06176_consen  175 IIDTQGKRM  183 (229)
T ss_pred             EEECccccc
Confidence            999987654

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.98  E-value=3.8e-10  Score=98.28  Aligned_cols=148  Identities=20%  Similarity=0.174  Sum_probs=113.6

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeC-CCCcEEEEEEEechh---hhHHHHHHHHHHHHHHh-ccCCCCcceEEEceeee
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDN-EKKELVAIKIVRSIN---KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~  163 (264)
                      ....+|.++..||.|.|+.|+.+... .++..|++|.+.+..   .....-..|+.+...+. |.+.     ++....|.
T Consensus       262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~-----~g~~~~W~  336 (524)
T KOG0601|consen  262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPS-----VGKNSSWS  336 (524)
T ss_pred             eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhccccc-----CCCCCCcc
Confidence            44567899999999999999998765 567778888665321   11222244565555554 3333     77777777


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC-CcEEeccCCCC
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA-EYVKVPDYKVP  241 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~-~~v~l~Dfg~a  241 (264)
                      .....|+-.||| ++++...+...  ..+++...+.+..|++.++.++|+..++|+|++|+||++..+ +..++.|||++
T Consensus       337 ~~r~~~ip~e~~~~~s~~l~~~~~--~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~  414 (524)
T KOG0601|consen  337 QLRQGYIPLEFCEGGSSSLRSVTS--QMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCW  414 (524)
T ss_pred             ccccccCchhhhcCcchhhhhHHH--HhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccc
Confidence            777888999999 77766555333  268888999999999999999999999999999999999987 78899999998


Q ss_pred             Cc
Q 024661          242 SP  243 (264)
Q Consensus       242 ~~  243 (264)
                      +.
T Consensus       415 t~  416 (524)
T KOG0601|consen  415 TR  416 (524)
T ss_pred             cc
Confidence            74

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.93  E-value=4.2e-08  Score=78.61  Aligned_cols=145  Identities=22%  Similarity=0.256  Sum_probs=85.4

Q ss_pred             EeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC-
Q 024661           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-  175 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-  175 (264)
                      ++.|+.|..+.||++....  ..+++|+.... .....+..|..+++.+....+.-+.++............+++|+++ 
T Consensus         2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~   78 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP   78 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT--SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred             CccCCCCCeeeEEEEEECC--cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence            4678899999999998765  47999987655 5567788899999999887663333332222223345689999999 


Q ss_pred             CCCHHH----------------HHH---hc--CCCCCCHHH---------HHHH------------HHHHHH-HHHHHHH
Q 024661          176 GPSLYD----------------FLR---KN--SYRSFPIDL---------VREL------------GRQLLE-SVAFMHE  212 (264)
Q Consensus       176 ~~~L~~----------------~l~---~~--~~~~~~~~~---------~~~i------------~~qi~~-~l~~lH~  212 (264)
                      |..+..                .+.   +.  ....+....         ....            ...+.. .+..+++
T Consensus        79 g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (239)
T PF01636_consen   79 GRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEA  158 (239)
T ss_dssp             SEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHh
Confidence            666666                111   11  101111100         0000            011222 2333332


Q ss_pred             -------CCCeecCCCCCCEEee-cCCcEEeccCCCCCcC
Q 024661          213 -------LRLIHTDLKPENILLV-SAEYVKVPDYKVPSPR  244 (264)
Q Consensus       213 -------~~ivH~dikp~Nili~-~~~~v~l~Dfg~a~~~  244 (264)
                             ..++|+|+.+.|||++ .++.+.|+||+.+...
T Consensus       159 ~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~  198 (239)
T PF01636_consen  159 LLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWG  198 (239)
T ss_dssp             HHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EEE
T ss_pred             hhccCCCcEEEEeccccccceeeeccceeEEEecccceEC
Confidence                   3599999999999999 6677789999987653

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.89  E-value=4.8e-08  Score=78.13  Aligned_cols=139  Identities=14%  Similarity=0.152  Sum_probs=84.5

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC-C
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-G  176 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~  176 (264)
                      ..||.|..+.||+..    +..+++|+.... .......+|.++++.+...+++.   ...+.+..+.+...+|||++ |
T Consensus         7 ~~i~~G~t~~~y~~~----~~~~VlR~~~~~-~~~~~i~~E~~~l~~l~~~glpv---P~~~~~~~~~~~~glv~e~i~G   78 (226)
T TIGR02172         7 TQTGEGGNGESYTHK----TGKWMLKLYNPG-FDKETIKREFDASRKVFSLGIPT---PHPFDLVEDGGRLGLIYELIVG   78 (226)
T ss_pred             eeecCCCCcceeEec----CCCEEEEeCCCC-CCHHHHHHHHHHHHHHHHcCCCC---CceEEEEecCCeeeeeeeecCC
Confidence            578999999999842    445788887642 23455788999999998766533   44555556677788999999 5


Q ss_pred             CC-HH--------------HHHH-------hcCCCCCCHHH-HHHHHH----------HHHHH-HHHHHH----CCCeec
Q 024661          177 PS-LY--------------DFLR-------KNSYRSFPIDL-VRELGR----------QLLES-VAFMHE----LRLIHT  218 (264)
Q Consensus       177 ~~-L~--------------~~l~-------~~~~~~~~~~~-~~~i~~----------qi~~~-l~~lH~----~~ivH~  218 (264)
                      .+ +.              ..+.       ........... ...+..          .+... ..+|..    ..++|+
T Consensus        79 ~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~Hg  158 (226)
T TIGR02172        79 KRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHG  158 (226)
T ss_pred             ccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEec
Confidence            43 21              1111       10000111110 001100          11111 122221    247899


Q ss_pred             CCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          219 DLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       219 dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      |+.|.||+++.++ +.|+||+.+....
T Consensus       159 D~~~~Nii~~~~~-~~iIDwe~a~~Gd  184 (226)
T TIGR02172       159 DFQIGNLITSGKG-TYWIDLGDFGYGN  184 (226)
T ss_pred             CCCCCcEEEcCCC-cEEEechhcCcCC
Confidence            9999999999888 9999999887644

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=98.86  E-value=2.6e-08  Score=74.75  Aligned_cols=130  Identities=21%  Similarity=0.186  Sum_probs=94.9

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEe
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE  173 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e  173 (264)
                      -...+.|+.|.+|.||+|.+.  |..+|+|+-+ ....+..+..|.++|..++..++.    .+++.+    +..++.||
T Consensus        24 ~~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr-~ds~r~~l~kEakiLeil~g~~~~----p~vy~y----g~~~i~me   92 (201)
T COG2112          24 LRVEKELAKGTTSVVYLGEWR--GGEVALKVRR-RDSPRRNLEKEAKILEILAGEGVT----PEVYFY----GEDFIRME   92 (201)
T ss_pred             hhhhhhhhcccccEEEEeecc--CceEEEEEec-CCcchhhHHHHHHHHHHhhhcCCC----ceEEEe----chhhhhhh
Confidence            445678999999999999886  5578999654 456678889999999999887652    344443    23356699


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCC-CCCEEeecCCcEEeccCCCCCc
Q 024661          174 KL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLK-PENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       174 ~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dik-p~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      |+ |..|.+.-...     +.+    -+..+++.-.-|-..||-|+.|. |..+++..++.+.|+||..|+.
T Consensus        93 ~i~G~~L~~~~~~~-----~rk----~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~  155 (201)
T COG2112          93 YIDGRPLGKLEIGG-----DRK----HLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATF  155 (201)
T ss_pred             hhcCcchhhhhhcc-----cHH----HHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence            99 76888765421     122    23456666556778899999985 5666666777999999999984

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=98.80  E-value=2.8e-07  Score=71.80  Aligned_cols=137  Identities=17%  Similarity=0.252  Sum_probs=103.9

Q ss_pred             EeecccCccEEEEEEEeCCCCcEEEEEEEechh-----------------hhHHHHHHHHHHHHHHh-ccCCCCcceEEE
Q 024661           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----------------KYREAAMIEIDVLQRLA-RHDIGGTRCVQI  158 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----------------~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~  158 (264)
                      ...||+|+.-.||.--+   ....+||+.....                 ....+..+|+.....+. ..+....++.++
T Consensus         6 ~~~i~~G~~R~cy~HP~---dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~   82 (199)
T PF10707_consen    6 SDLIAQGGERDCYQHPD---DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF   82 (199)
T ss_pred             CcccccCCCceEEECCC---CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence            35799999999986433   3447899887543                 23567788999888888 888888889999


Q ss_pred             ceeeeeCCEEEEEEecC-C------CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC
Q 024661          159 RNWFDYRNHICIVFEKL-G------PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (264)
Q Consensus       159 ~~~~~~~~~~~lv~e~~-~------~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~  231 (264)
                      +++.+++.-.-+|+|.+ +      .+|.+++...   .+++ .   +...+-+-..||-+++|+.+|++|.||++....
T Consensus        83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~---~~~~-~---~~~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~  155 (199)
T PF10707_consen   83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLKEG---GLTE-E---LRQALDEFKRYLLDHHIVIRDLNPHNIVVQRRD  155 (199)
T ss_pred             eEEEecCCceEEEEEEEECCCCCcCccHHHHHHcC---CccH-H---HHHHHHHHHHHHHHcCCeecCCCcccEEEEecC
Confidence            99999999999999998 2      3688888654   3655 2   334445566788999999999999999998543


Q ss_pred             ----cEEecc-CCCCCc
Q 024661          232 ----YVKVPD-YKVPSP  243 (264)
Q Consensus       232 ----~v~l~D-fg~a~~  243 (264)
                          .+.|+| ||....
T Consensus       156 ~~~~~lvlIDG~G~~~~  172 (199)
T PF10707_consen  156 SGEFRLVLIDGLGEKEL  172 (199)
T ss_pred             CCceEEEEEeCCCCccc
Confidence                577777 676544

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=98.67  E-value=1.9e-07  Score=82.45  Aligned_cols=140  Identities=17%  Similarity=0.215  Sum_probs=87.3

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEech--------------------------------hhhHHHHHHHHHHHH--
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSI--------------------------------NKYREAAMIEIDVLQ--  143 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------------------------------~~~~~~~~~e~~~l~--  143 (264)
                      +.|+.-+.|.|++|+.+. |+.||||+.+..                                +...+.+..|++..+  
T Consensus       167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA  245 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA  245 (538)
T ss_pred             chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence            469999999999999776 999999987421                                011222222333222  


Q ss_pred             ----HH----hccCCCCcceEEEceeee-eCCEEEEEEecC-CCCHHH--HHHhcCCCCCCHHHHHHHHHHHHHHHH-HH
Q 024661          144 ----RL----ARHDIGGTRCVQIRNWFD-YRNHICIVFEKL-GPSLYD--FLRKNSYRSFPIDLVRELGRQLLESVA-FM  210 (264)
Q Consensus       144 ----~l----~~~~~~~~~~~~~~~~~~-~~~~~~lv~e~~-~~~L~~--~l~~~~~~~~~~~~~~~i~~qi~~~l~-~l  210 (264)
                          ++    .|-+.  ..-+.+...+. ....-.|+|||+ |..+.|  .+.+.   .++...+..   .+.++.. -+
T Consensus       246 ~Nae~~~~~f~~~~~--~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~---gi~~~~i~~---~l~~~~~~qI  317 (538)
T KOG1235|consen  246 KNAERFRENFKDFSL--LTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKR---GISPHDILN---KLVEAYLEQI  317 (538)
T ss_pred             HhHHHHHHHHHhccc--ccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHc---CCCHHHHHH---HHHHHHHHHH
Confidence                22    22221  11133333332 345779999999 654444  34444   466664433   3333333 24


Q ss_pred             HHCCCeecCCCCCCEEeec----CCcEEeccCCCCCcCCC
Q 024661          211 HELRLIHTDLKPENILLVS----AEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       211 H~~~ivH~dikp~Nili~~----~~~v~l~Dfg~a~~~~~  246 (264)
                      -..|++|+|-+|.||++..    ++.+.+-|||+......
T Consensus       318 f~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  318 FKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             HhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence            4679999999999999994    56899999999876544

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.65  E-value=5e-07  Score=73.19  Aligned_cols=139  Identities=16%  Similarity=0.079  Sum_probs=83.4

Q ss_pred             ecccCcc-EEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC-C
Q 024661           99 KMGEGTF-GQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-G  176 (264)
Q Consensus        99 ~lg~G~~-g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~  176 (264)
                      .|..|.+ ..||+....  +..+.+|+.....  .....+|+++++.+... +.   +.+++.+....+..++|||++ |
T Consensus         5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~-~~---vP~v~~~~~~~~~~~lv~e~i~G   76 (244)
T cd05150           5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP--TYELEREAERLRWLAGK-LP---VPEVIDYGSDDGRAWLLTSAVPG   76 (244)
T ss_pred             ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc--ccchHHHHHHHHHHHhc-CC---CCeEEEEEecCCccEEEEEeeCC
Confidence            3444554 788988653  3568888765432  34567899999998765 32   356666666666789999999 6


Q ss_pred             CCHHHHH----------------H---hcC--CCCCCHH--HHHHHHH--------------------HHHHHHHHHHH-
Q 024661          177 PSLYDFL----------------R---KNS--YRSFPID--LVRELGR--------------------QLLESVAFMHE-  212 (264)
Q Consensus       177 ~~L~~~l----------------~---~~~--~~~~~~~--~~~~i~~--------------------qi~~~l~~lH~-  212 (264)
                      .+|....                .   +..  ...+...  .......                    .+...+..|-. 
T Consensus        77 ~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  156 (244)
T cd05150          77 VPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEAT  156 (244)
T ss_pred             ccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhh
Confidence            6665331                0   111  0011100  0000000                    01111222211 


Q ss_pred             ------CCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          213 ------LRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       213 ------~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                            ..++|+|+.+.|||++.++.+.|+||+.|....
T Consensus       157 ~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~gd  195 (244)
T cd05150         157 RPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGVAD  195 (244)
T ss_pred             CCCcCceEEECCCCCCccEEEeCCcEEEEEEcccccccc
Confidence                  248999999999999998878899999886543

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=98.57  E-value=7.9e-07  Score=71.64  Aligned_cols=76  Identities=14%  Similarity=0.073  Sum_probs=44.4

Q ss_pred             eecccCccE-EEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhcc-CCCCcceEEEceeeeeCCEEEEEEecC
Q 024661           98 SKMGEGTFG-QVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH-DIGGTRCVQIRNWFDYRNHICIVFEKL  175 (264)
Q Consensus        98 ~~lg~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~-~~~~~~~~~~~~~~~~~~~~~lv~e~~  175 (264)
                      +.|+.|+.. .||+..     ..+++|+... ......+.+|.++++.+... .+..+.++............|++|+++
T Consensus         3 ~~~~~gG~~n~vy~~~-----~~~VlR~~~~-~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i   76 (235)
T cd05155           3 EPVDSGGTDNATFRLG-----DDMSVRLPSA-AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL   76 (235)
T ss_pred             eeccCCCcccceEEcC-----CceEEEcCCc-cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence            456766665 588752     3477787554 22345788899999999754 343333222211111123458899999


Q ss_pred             -CCCH
Q 024661          176 -GPSL  179 (264)
Q Consensus       176 -~~~L  179 (264)
                       |.++
T Consensus        77 ~G~~l   81 (235)
T cd05155          77 EGETA   81 (235)
T ss_pred             cCCCC
Confidence             6554

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.56  E-value=1.2e-07  Score=77.46  Aligned_cols=125  Identities=19%  Similarity=0.324  Sum_probs=90.5

Q ss_pred             EEEEEeCCCCcEEEEEEEe----chhhh-HHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC-----CEEEEEEecC-C
Q 024661          108 VVECFDNEKKELVAIKIVR----SINKY-REAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR-----NHICIVFEKL-G  176 (264)
Q Consensus       108 V~~~~~~~~~~~vaiK~~~----~~~~~-~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~-----~~~~lv~e~~-~  176 (264)
                      ||++-++..|.+|..-.+.    ++... .+....-..-+-++-|.|+     ++++.+|.+.     ....+++||+ .
T Consensus        82 v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllqlvHsnl-----vkfH~yw~d~K~~e~~rviFiteymss  156 (458)
T KOG1266|consen   82 VYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQLVHSNL-----VKFHKYWTDKKYEEKPRVIFITEYMSS  156 (458)
T ss_pred             HHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHHHHHHH-----HHHHHhhcccccccccceEEEEecccc
Confidence            5555556666555433221    11111 1122223345666777777     9999888764     3578999999 9


Q ss_pred             CCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEeecCCcEEecc
Q 024661          177 PSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPD  237 (264)
Q Consensus       177 ~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dikp~Nili~~~~~v~l~D  237 (264)
                      |+|..+|++.+  ...+.+..-.+|+.||+.||.|||++.  |+|+++..+.|++..+|-+|+.-
T Consensus       157 gs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~  221 (458)
T KOG1266|consen  157 GSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGS  221 (458)
T ss_pred             hhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEecc
Confidence            99999998542  346788888999999999999999984  99999999999999999998763

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=98.54  E-value=8.5e-06  Score=63.19  Aligned_cols=128  Identities=21%  Similarity=0.287  Sum_probs=94.2

Q ss_pred             CCeEEEeecccCcc-EEEEEEEeCCCCcEEEEEEEec----------------hh------hhHHHHHHHHHHHHHHhcc
Q 024661           92 PRYRILSKMGEGTF-GQVVECFDNEKKELVAIKIVRS----------------IN------KYREAAMIEIDVLQRLARH  148 (264)
Q Consensus        92 ~~y~~~~~lg~G~~-g~V~~~~~~~~~~~vaiK~~~~----------------~~------~~~~~~~~e~~~l~~l~~~  148 (264)
                      .+++.++.||.|.- |.||++...  |+.+|+|+++.                ..      .....+..|.+...+|+..
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I~--g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~  114 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEID--GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA  114 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEEC--CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence            67999999999999 999999865  67899999431                00      2234678899999999887


Q ss_pred             CCCCcceEEEceeeeeC------------------CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH
Q 024661          149 DIGGTRCVQIRNWFDYR------------------NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF  209 (264)
Q Consensus       149 ~~~~~~~~~~~~~~~~~------------------~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~  209 (264)
                      +-.+...++.++++.-.                  ...-||.||+ ...           .++..    -+.+|++-|..
T Consensus       115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~~~~~----~~~~~~~dl~~  179 (207)
T PF13095_consen  115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------PLQIR----DIPQMLRDLKI  179 (207)
T ss_pred             cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------ccchh----HHHHHHHHHHH
Confidence            76555568888886321                  1246777777 322           12222    35678888999


Q ss_pred             HHHCCCeecCCCCCCEEeecCCcEEeccCCCC
Q 024661          210 MHELRLIHTDLKPENILLVSAEYVKVPDYKVP  241 (264)
Q Consensus       210 lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a  241 (264)
                      +|..||+-+|+++.|..     .-+|+|||.+
T Consensus       180 ~~k~gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  180 LHKLGIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             HHHCCeeeccCcccccc-----CCEEEecccC
Confidence            99999999999999987     2488899864

>PLN02876 acyl-CoA dehydrogenase

Probab=98.52  E-value=2.3e-06  Score=81.08  Aligned_cols=147  Identities=15%  Similarity=0.229  Sum_probs=88.1

Q ss_pred             EeecccCccEEEEEEEeCCCC--cEEEEEEEechh--hhHHHHHHHHHHHHHHh-ccCCCCcceEEEceeeeeC---CEE
Q 024661           97 LSKMGEGTFGQVVECFDNEKK--ELVAIKIVRSIN--KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYR---NHI  168 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~--~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~~---~~~  168 (264)
                      .+.++.|.+..+|+......+  ..+++|+.....  .....+.+|.++++.+. |.+++.   .+++.++.+.   +..
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpV---P~v~~~~~d~~v~G~~  119 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPV---PKVYCLCTDASVIGTA  119 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCC---CcEEEEecCCCcCCCc
Confidence            567899999999998765432  357777653221  22356789999999997 555533   4455555443   467


Q ss_pred             EEEEecC-CCCHH--------------------HHHH---hcCCC---------C--CCHHHHHHHHHH-----------
Q 024661          169 CIVFEKL-GPSLY--------------------DFLR---KNSYR---------S--FPIDLVRELGRQ-----------  202 (264)
Q Consensus       169 ~lv~e~~-~~~L~--------------------~~l~---~~~~~---------~--~~~~~~~~i~~q-----------  202 (264)
                      |+|||++ |..+.                    +.+.   .....         .  +-...+..|..+           
T Consensus       120 flVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~  199 (822)
T PLN02876        120 FYIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPP  199 (822)
T ss_pred             eEEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCC
Confidence            8999999 43321                    1111   10000         0  111223222221           


Q ss_pred             ----HHHHHHHHHH-----------CCCeecCCCCCCEEeecC-Cc-EEeccCCCCCcCCC
Q 024661          203 ----LLESVAFMHE-----------LRLIHTDLKPENILLVSA-EY-VKVPDYKVPSPRHA  246 (264)
Q Consensus       203 ----i~~~l~~lH~-----------~~ivH~dikp~Nili~~~-~~-v~l~Dfg~a~~~~~  246 (264)
                          +...+++|..           ..+||+|+++.|||++.+ +. +-|.||+++...++
T Consensus       200 ~~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~GdP  260 (822)
T PLN02876        200 RNPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLGNQ  260 (822)
T ss_pred             CChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccCCh
Confidence                2234556643           249999999999999853 34 57999999887554

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=98.39  E-value=8.5e-06  Score=68.36  Aligned_cols=137  Identities=23%  Similarity=0.252  Sum_probs=98.8

Q ss_pred             EEEeecccCccEEEEEEEeCCCCcEEEEEEEec---------------------------hhhhHHHHHHHHHHHHHHhc
Q 024661           95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---------------------------INKYREAAMIEIDVLQRLAR  147 (264)
Q Consensus        95 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---------------------------~~~~~~~~~~e~~~l~~l~~  147 (264)
                      .+...|..|.-+.||.|.. ..|..+|||+++.                           .+...--...|++.|+++..
T Consensus       147 ~inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~  225 (520)
T KOG2270|consen  147 EINGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN  225 (520)
T ss_pred             ecccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh
Confidence            3445688899999999874 5677799998741                           01222334568999999998


Q ss_pred             cCCCCcceEEEceeeeeCCEEEEEEecCCCCHH--HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCCCCC
Q 024661          148 HDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLY--DFLRKNSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPEN  224 (264)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~--~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~dikp~N  224 (264)
                      ..|+.|--+-+-       .-.|||+|+|.+=+  -.|+.   ..++...+..+-.|++.-+.-|. .+++||.||+--|
T Consensus       226 aGIP~PePIlLk-------~hVLVM~FlGrdgw~aPkLKd---~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN  295 (520)
T KOG2270|consen  226 AGIPCPEPILLK-------NHVLVMEFLGRDGWAAPKLKD---ASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFN  295 (520)
T ss_pred             cCCCCCCceeee-------cceEeeeeccCCCCcCccccc---ccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhh
Confidence            887554433332       33799999964322  22222   25777788888999999888875 7899999999999


Q ss_pred             EEeecCCcEEeccCCCCCc
Q 024661          225 ILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       225 ili~~~~~v~l~Dfg~a~~  243 (264)
                      +|+. +|.+.++|.+-+..
T Consensus       296 ~Lyh-dG~lyiIDVSQSVE  313 (520)
T KOG2270|consen  296 LLYH-DGKLYIIDVSQSVE  313 (520)
T ss_pred             heEE-CCEEEEEEcccccc
Confidence            9986 68899999987753

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.35  E-value=4.7e-08  Score=90.51  Aligned_cols=146  Identities=16%  Similarity=0.142  Sum_probs=107.8

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      +.+.+.+-+.+|.++.++.+....+|...++|+..+..+....-.+++.--+.+.+ ...++.++.....+......+|+
T Consensus       804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i-~p~~P~v~~~~~s~~~rsP~~L~  882 (1205)
T KOG0606|consen  804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILI-TPRSPAVVRSFPSFPCRSPLPLV  882 (1205)
T ss_pred             ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccc-cCCCCceecccCCCCCCCCcchh
Confidence            44777778999999999999888888777777655333222111111111111111 01124446555556677889999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCC
Q 024661          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV  240 (264)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~  240 (264)
                      ++++ +++|...++...  ..+.+-++.++..+..+++|||...++|+|++|.|+|+..++..+++|||.
T Consensus       883 ~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t  950 (1205)
T KOG0606|consen  883 GHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGT  950 (1205)
T ss_pred             hHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCcccc
Confidence            9999 889999988766  678888888999999999999999999999999999999999999999973

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=98.29  E-value=8.8e-06  Score=65.43  Aligned_cols=141  Identities=16%  Similarity=0.250  Sum_probs=81.4

Q ss_pred             EeecccCccEEEEEEEeCC-CCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC
Q 024661           97 LSKMGEGTFGQVVECFDNE-KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  175 (264)
                      .+.|..|-...+|++.... .++.+++|+........-...+|+.+++.+...++.    +.++..+..    .++|||+
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~----P~v~~~~~~----~~l~e~i   74 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLA----PKLYATFQN----GLIYEFI   74 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCC----CeEEEEeCC----cEEEEee
Confidence            3567778888999987543 356788997654332222335799999999876652    333333321    4799999


Q ss_pred             -CCCHHH--------------HHH---hcC--C-------CCCC-HHHHHHHHHH----------------------HHH
Q 024661          176 -GPSLYD--------------FLR---KNS--Y-------RSFP-IDLVRELGRQ----------------------LLE  205 (264)
Q Consensus       176 -~~~L~~--------------~l~---~~~--~-------~~~~-~~~~~~i~~q----------------------i~~  205 (264)
                       |.++..              .+.   ...  .       ...+ .+.+..+...                      +..
T Consensus        75 ~G~~l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  154 (235)
T cd05157          75 PGRTLEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRD  154 (235)
T ss_pred             CCCcCCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHH
Confidence             654421              111   011  0       0111 1122222111                      111


Q ss_pred             HHHHH----HH----CCCeecCCCCCCEEeec-CCcEEeccCCCCCcCC
Q 024661          206 SVAFM----HE----LRLIHTDLKPENILLVS-AEYVKVPDYKVPSPRH  245 (264)
Q Consensus       206 ~l~~l----H~----~~ivH~dikp~Nili~~-~~~v~l~Dfg~a~~~~  245 (264)
                      .+..|    -.    .+++|+|+.+.|||++. ++.+.|+||..|....
T Consensus       155 ~~~~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~  203 (235)
T cd05157         155 EISWLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNY  203 (235)
T ss_pred             HHHHHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCc
Confidence            11122    11    25899999999999998 5789999999887644

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PRK05231 homoserine kinase; Provisional

Probab=98.27  E-value=3.2e-05  Score=65.24  Aligned_cols=143  Identities=16%  Similarity=0.142  Sum_probs=80.3

Q ss_pred             EeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEc-e--eeeeCCEEEEEEe
Q 024661           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR-N--WFDYRNHICIVFE  173 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~-~--~~~~~~~~~lv~e  173 (264)
                      .+.|+.|....+|+.... .| .+++|++..  ...+.+..|..+++.+...++.-+..+... +  +....+..+++++
T Consensus        27 ~~~l~~G~~n~~y~v~t~-~g-~~vLK~~~~--~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~  102 (319)
T PRK05231         27 LKGIAEGIENSNFFLTTT-QG-EYVLTLFER--LTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVT  102 (319)
T ss_pred             cchhccccccceEEEEeC-CC-cEEEEEecc--CChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEE
Confidence            345777777789988743 33 588898752  223455567788888877666434333211 1  1233567899999


Q ss_pred             cC-CCCH-----------HHHHHh----cCCC--------CCCH-HHHH------------HHHHH-HHHHHHHHH----
Q 024661          174 KL-GPSL-----------YDFLRK----NSYR--------SFPI-DLVR------------ELGRQ-LLESVAFMH----  211 (264)
Q Consensus       174 ~~-~~~L-----------~~~l~~----~~~~--------~~~~-~~~~------------~i~~q-i~~~l~~lH----  211 (264)
                      ++ |..+           ...+.+    ....        .+.+ ....            ..+.+ +...++.+.    
T Consensus       103 ~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  182 (319)
T PRK05231        103 FLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAW  182 (319)
T ss_pred             ecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhcccc
Confidence            99 5422           111110    0000        0001 0100            01111 111222332    


Q ss_pred             ---HCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          212 ---ELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       212 ---~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                         ..+++|+|+++.|||++.+....|+||+.+..
T Consensus       183 ~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~  217 (319)
T PRK05231        183 PALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACN  217 (319)
T ss_pred             ccCCcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence               23899999999999999665568999998865

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=98.25  E-value=1.8e-06  Score=71.15  Aligned_cols=133  Identities=20%  Similarity=0.206  Sum_probs=94.6

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEec---------h--------------hhhHHHHHHHHHHHHHHhccC
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---------I--------------NKYREAAMIEIDVLQRLARHD  149 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---------~--------------~~~~~~~~~e~~~l~~l~~~~  149 (264)
                      -+.++.+||-|.-+-||.+-+. .|...++|+-+.         .              .-.+-...+|+..++.+..+.
T Consensus        93 v~svGnqIGVGKESDIY~v~d~-~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g  171 (465)
T KOG2268|consen   93 VESVGNQIGVGKESDIYVVADE-EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG  171 (465)
T ss_pred             hhhhccccccccccceEEEecC-CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence            3677899999999999999864 466788885321         0              012334567999999998866


Q ss_pred             CCCcceEEEceeeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEee
Q 024661          150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV  228 (264)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~  228 (264)
                      .+-   ...++    .+.-++|||++ |-.|...-.-     .+   +..+...+..-+--|..+|+||+|..--||++.
T Consensus       172 fpV---PkpiD----~~RH~Vvmelv~g~Pl~~v~~v-----~d---~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~  236 (465)
T KOG2268|consen  172 FPV---PKPID----HNRHCVVMELVDGYPLRQVRHV-----ED---PPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVK  236 (465)
T ss_pred             CCC---CCccc----ccceeeHHHhhcccceeeeeec-----CC---hHHHHHHHHHHHHHHHHcCceecccchheeEEe
Confidence            422   33333    35568999999 7677654321     12   233455566667778899999999999999999


Q ss_pred             cCCcEEeccCCCC
Q 024661          229 SAEYVKVPDYKVP  241 (264)
Q Consensus       229 ~~~~v~l~Dfg~a  241 (264)
                      +++.++++||=-+
T Consensus       237 dd~~i~vIDFPQm  249 (465)
T KOG2268|consen  237 DDDKIVVIDFPQM  249 (465)
T ss_pred             cCCCEEEeechHh
Confidence            9999999999543

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=98.24  E-value=2.7e-05  Score=65.35  Aligned_cols=145  Identities=17%  Similarity=0.197  Sum_probs=83.8

Q ss_pred             EEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEce---eeeeCCEEEEEE
Q 024661           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRN---WFDYRNHICIVF  172 (264)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~---~~~~~~~~~lv~  172 (264)
                      ..+.++.|....+|++.. .++ .+++|+..... ....+..|.+++..|...+++.+.++...+   .....+..+++|
T Consensus        26 ~i~~~~~G~~n~~y~v~t-~~~-~~vLK~~~~~~-~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~  102 (307)
T TIGR00938        26 SLKGIAEGVENSNYLLTT-DVG-RYILTLYEKRV-KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLV  102 (307)
T ss_pred             eccccCCccccceEEEEe-CCC-cEEEEEecCCC-CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEE
Confidence            356677787788998864 233 57788775422 234556788888888776653333333211   112246789999


Q ss_pred             ecC-CCCHH-----------HHHH---h-cCCC--------CCC-HHHH--H----------HHHHHHHHHHHHHHH---
Q 024661          173 EKL-GPSLY-----------DFLR---K-NSYR--------SFP-IDLV--R----------ELGRQLLESVAFMHE---  212 (264)
Q Consensus       173 e~~-~~~L~-----------~~l~---~-~~~~--------~~~-~~~~--~----------~i~~qi~~~l~~lH~---  212 (264)
                      +++ |..+.           ..+.   . ....        ... +...  .          .....+...++++..   
T Consensus       103 e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~  182 (307)
T TIGR00938       103 EFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWP  182 (307)
T ss_pred             EeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhh
Confidence            999 53321           1111   0 0100        000 0000  0          001123334555532   


Q ss_pred             ----CCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          213 ----LRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       213 ----~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                          .+++|+|+++.||+++.++.+.|+||+.+..
T Consensus       183 ~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~  217 (307)
T TIGR00938       183 RDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACT  217 (307)
T ss_pred             hcCCCccCCCCCCcCcEEEECCceEEEeecccccC
Confidence                5899999999999999988778999998854

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=98.18  E-value=2.9e-05  Score=64.70  Aligned_cols=144  Identities=17%  Similarity=0.125  Sum_probs=85.3

Q ss_pred             EeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEc-e--eeeeCCEEEEEEe
Q 024661           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR-N--WFDYRNHICIVFE  173 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~-~--~~~~~~~~~lv~e  173 (264)
                      .+.|..|....+|+....  +..+++|+...  .....+..|+++++.+.+.++.-+..+... +  .....+..++|++
T Consensus        19 i~~i~~G~~n~~y~v~~~--~~~~vLr~~~~--~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~   94 (296)
T cd05153          19 FEGISAGIENTNYFVTTD--SGRYVLTLFEK--VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVE   94 (296)
T ss_pred             eecccCccccceEEEEeC--CCcEEEEEcCC--CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEE
Confidence            556777877889988643  34688898764  334567779999999987765333222211 1  1233466789999


Q ss_pred             cC-CCCHHH-----------HHH---h-c---CCC----C-CCHHHH----------HHHHHHHHHHHHHHHH-------
Q 024661          174 KL-GPSLYD-----------FLR---K-N---SYR----S-FPIDLV----------RELGRQLLESVAFMHE-------  212 (264)
Q Consensus       174 ~~-~~~L~~-----------~l~---~-~---~~~----~-~~~~~~----------~~i~~qi~~~l~~lH~-------  212 (264)
                      ++ |..+..           .+.   . .   ...    . ..+...          ......+..++.++..       
T Consensus        95 ~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~  174 (296)
T cd05153          95 FLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLP  174 (296)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCC
Confidence            99 544321           111   0 0   000    0 000000          0011112334444443       


Q ss_pred             CCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          213 LRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       213 ~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      .+++|+|+.|.|||++.++.+.|+||+.+...
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~g  206 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFACTD  206 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhhcCc
Confidence            37999999999999998877889999987653

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>TIGR02721 ycfN_thiK thiamine kinase

Probab=98.18  E-value=1.1e-05  Score=65.76  Aligned_cols=137  Identities=14%  Similarity=0.120  Sum_probs=77.7

Q ss_pred             ecccCccEEEEEEEeCCCCcEEEEEEEechhhhH-HHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC-C
Q 024661           99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-G  176 (264)
Q Consensus        99 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~  176 (264)
                      .+..|-.+.+|+..  .+++.+++|+........ -...+|..+++.+...++. |.   ++....    -++||||+ |
T Consensus         3 ~~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~-P~---~i~~~~----~~~v~e~i~G   72 (256)
T TIGR02721         3 TLSGGLTNRSWRIE--HPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLA-PK---PILVNE----HWLLVEWLEG   72 (256)
T ss_pred             cCCCcCcCCeEEEE--eCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCC-Cc---eEEEeC----CEEEEEeccC
Confidence            34567777888886  345678888754322211 2357799999999876552 22   222221    26899999 5


Q ss_pred             CCHHH--------------HHH---hcC--CCCCCHH-HHHHHHHHH---------HHHHHHHHH--------CCCeecC
Q 024661          177 PSLYD--------------FLR---KNS--YRSFPID-LVRELGRQL---------LESVAFMHE--------LRLIHTD  219 (264)
Q Consensus       177 ~~L~~--------------~l~---~~~--~~~~~~~-~~~~i~~qi---------~~~l~~lH~--------~~ivH~d  219 (264)
                      ..+..              .+.   +..  ...++.. .+..+..++         ...+..+-.        ..++|+|
T Consensus        73 ~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~D  152 (256)
T TIGR02721        73 EVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMD  152 (256)
T ss_pred             cccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCC
Confidence            44321              111   111  1112211 112222111         112222222        1489999


Q ss_pred             CCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          220 LKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       220 ikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      +.+.||+++.++ +.|+||+.|....+
T Consensus       153 l~~~Nil~~~~~-~~lIDwE~a~~gdp  178 (256)
T TIGR02721       153 VHAYNLVVTPQG-LKLIDWEYASDGDI  178 (256)
T ss_pred             CCcCcEEEeCCC-CEEEeccccCcCCH
Confidence            999999999877 78999998876543

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=98.16  E-value=8.5e-05  Score=64.12  Aligned_cols=75  Identities=20%  Similarity=0.208  Sum_probs=51.6

Q ss_pred             EeecccCccEEEEEEEeCCCCcEEEEEEEec--------hhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRS--------INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--------~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      .+.||.|.+..||++.....++.++||.-..        .....++...|.+.|+.+.....  ..+++++.+  +.+..
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p--~~VPkV~~~--D~~~~  106 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVP--DLVPKVYHY--DEELA  106 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCC--CCCCeEEEE--CCCCC
Confidence            4679999999999999865446799997431        12244667778888888754211  234555554  44567


Q ss_pred             EEEEecC
Q 024661          169 CIVFEKL  175 (264)
Q Consensus       169 ~lv~e~~  175 (264)
                      ++|||++
T Consensus       107 ~lVME~L  113 (401)
T PRK09550        107 VTVMEDL  113 (401)
T ss_pred             EEEEecC
Confidence            8999999

>PRK10593 hypothetical protein; Provisional

Probab=98.15  E-value=5.8e-05  Score=62.98  Aligned_cols=79  Identities=16%  Similarity=0.139  Sum_probs=54.0

Q ss_pred             EEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccC-CCCcceEEEceeeee---CCEEEE
Q 024661           95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD-IGGTRCVQIRNWFDY---RNHICI  170 (264)
Q Consensus        95 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~-~~~~~~~~~~~~~~~---~~~~~l  170 (264)
                      .-.+.||.|..+.||...... + .+.+|+.+ .......+..|.+.++.+.... +.   +.++++.+.+   .+..++
T Consensus        17 ~~~~~i~~G~~~~vy~~~~~~-~-~~~~k~~~-~~~~~~~~~~Ea~~L~~L~~~~~vp---VP~V~~~~~~~~~~g~~~L   90 (297)
T PRK10593         17 SRVECISEQPYAALWALYDSQ-G-NPMPLMAR-SFSTPGVAQQEAWKLSMLARSGTVR---MPTVYGVMTHEQSPGPDVL   90 (297)
T ss_pred             heeeecCCccceeEEEEEcCC-C-CEEEEEec-ccccchHHHHHHHHHHHHccCCCCC---cCcEEEEeccCCcCCCeEE
Confidence            346689999999999986432 3 46778743 2223468889999999997653 32   3555555443   467899


Q ss_pred             EEecC-CCCH
Q 024661          171 VFEKL-GPSL  179 (264)
Q Consensus       171 v~e~~-~~~L  179 (264)
                      |||++ +.++
T Consensus        91 VmE~i~G~~~  100 (297)
T PRK10593         91 LLERLRGVSV  100 (297)
T ss_pred             EEeccCCEec
Confidence            99999 6543

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=98.14  E-value=2.9e-05  Score=64.91  Aligned_cols=141  Identities=18%  Similarity=0.220  Sum_probs=82.6

Q ss_pred             eecccCccEEEEEEEeCC------CCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEE
Q 024661           98 SKMGEGTFGQVVECFDNE------KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~------~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      +.+..|-...+|++....      .++.+++|+............+|..+++.+...++.    ..++.++..    .+|
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~----P~~~~~~~~----~~v   75 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLG----PKLYGIFPN----GRI   75 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCC----CceEEEeCC----Cch
Confidence            455566667888887543      257899998765433334567799999999876652    334444332    358


Q ss_pred             EecC-CCCHHHH--------------HH---hcCCC-------CCC--HHHHHH--------------------------
Q 024661          172 FEKL-GPSLYDF--------------LR---KNSYR-------SFP--IDLVRE--------------------------  198 (264)
Q Consensus       172 ~e~~-~~~L~~~--------------l~---~~~~~-------~~~--~~~~~~--------------------------  198 (264)
                      +||+ |..+...              +.   +....       ...  +..+..                          
T Consensus        76 ~e~i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (302)
T cd05156          76 EEFIPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSL  155 (302)
T ss_pred             hheeCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHH
Confidence            8888 5444321              11   11100       000  001111                          


Q ss_pred             HHHHHHHHHHHHHH---------CCCeecCCCCCCEEeecC----CcEEeccCCCCCcCCC
Q 024661          199 LGRQLLESVAFMHE---------LRLIHTDLKPENILLVSA----EYVKVPDYKVPSPRHA  246 (264)
Q Consensus       199 i~~qi~~~l~~lH~---------~~ivH~dikp~Nili~~~----~~v~l~Dfg~a~~~~~  246 (264)
                      +..++...+.++-.         ..++|+|+.+.|||++.+    +.+.|+||+.|.....
T Consensus       156 ~~~~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p  216 (302)
T cd05156         156 FLEDEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYR  216 (302)
T ss_pred             HHHHHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCc
Confidence            11222233334432         258999999999999985    8899999999876443

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=97.94  E-value=0.0002  Score=60.74  Aligned_cols=82  Identities=22%  Similarity=0.175  Sum_probs=51.4

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEe--------chhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVR--------SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~--------~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      +.||.|....||++.+...++.++||.-.        ......++...|.+.|+......  ...+.+++  +.+.+...
T Consensus         1 ~EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~--P~~vP~vy--~~D~e~~~   76 (370)
T TIGR01767         1 QEVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHV--PHLVPRIF--HFDTEMAV   76 (370)
T ss_pred             CcCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccC--ccccCeEE--EEccccce
Confidence            36899999999999975444679999532        12334455667888887765421  12334443  33556667


Q ss_pred             EEEecC-C-CCHHHHH
Q 024661          170 IVFEKL-G-PSLYDFL  183 (264)
Q Consensus       170 lv~e~~-~-~~L~~~l  183 (264)
                      +|||++ . ..|.+.+
T Consensus        77 ~vMEdL~~~~ilR~~L   92 (370)
T TIGR01767        77 TVMEDLSHHKIARKGL   92 (370)
T ss_pred             ehHhhCccchHHHHHH
Confidence            999999 3 3444444

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.92  E-value=3.5e-05  Score=59.74  Aligned_cols=100  Identities=20%  Similarity=0.161  Sum_probs=75.2

Q ss_pred             HHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC-CCCHHHHHHh-cCCCCCCHHHHHHHHHHHHHHHHHHHH-
Q 024661          136 MIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRK-NSYRSFPIDLVRELGRQLLESVAFMHE-  212 (264)
Q Consensus       136 ~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~-  212 (264)
                      ..|.-+++.+.+..    ++.+++|++..    +++.|+. .+++...... ......++.....|+.++++.+++++. 
T Consensus         7 ~~E~lll~~l~~~~----~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~   78 (188)
T PF12260_consen    7 NNEPLLLQLLQGSE----PFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHG   78 (188)
T ss_pred             ccHHHHHHHcCCCC----CCCCeeeECCC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC
Confidence            34778888888742    45888888754    5788999 4555422000 011246889999999999999999987 


Q ss_pred             --CCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          213 --LRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       213 --~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                        ..+.-.|++++|+-+++++++|++|...+..
T Consensus        79 ~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~  111 (188)
T PF12260_consen   79 PLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFV  111 (188)
T ss_pred             CCCcEEEeecchHHeEEeCCCcEEEEechhcch
Confidence              3577799999999999999999999976543

Proteins in this uncharacterised family are described as transmembrane proteins.

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=97.79  E-value=0.0004  Score=58.92  Aligned_cols=139  Identities=14%  Similarity=0.198  Sum_probs=77.3

Q ss_pred             eecccCccEEEEEEEeCCC---CcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEec
Q 024661           98 SKMGEGTFGQVVECFDNEK---KELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEK  174 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  174 (264)
                      +.|..|-...+|++.....   +..|++|+........-.-.+|..+++.+...++.    ..++.++.. +   +|.+|
T Consensus        20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl~----P~~l~~~~~-G---~i~~f   91 (330)
T PLN02421         20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGFG----AKLLGVFGN-G---MIQSF   91 (330)
T ss_pred             EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCCC----CceeEEeCC-c---Eeehh
Confidence            3454566677888865432   23788998764333222335689999999887764    344444432 2   47888


Q ss_pred             C-CCCHHH--------------HHH---hcC--C-CCCC-HHHHHHHHHHH----------------------HHHHHHH
Q 024661          175 L-GPSLYD--------------FLR---KNS--Y-RSFP-IDLVRELGRQL----------------------LESVAFM  210 (264)
Q Consensus       175 ~-~~~L~~--------------~l~---~~~--~-~~~~-~~~~~~i~~qi----------------------~~~l~~l  210 (264)
                      + +..|..              .+.   +..  . ...+ ...+..+..++                      ..-+..+
T Consensus        92 i~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l  171 (330)
T PLN02421         92 INARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVEL  171 (330)
T ss_pred             hcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHH
Confidence            8 543311              111   111  0 0011 12222222221                      1111111


Q ss_pred             ---H-HCC----CeecCCCCCCEEeec-CCcEEeccCCCCCcC
Q 024661          211 ---H-ELR----LIHTDLKPENILLVS-AEYVKVPDYKVPSPR  244 (264)
Q Consensus       211 ---H-~~~----ivH~dikp~Nili~~-~~~v~l~Dfg~a~~~  244 (264)
                         . ..+    ++|+|+.+.|||+++ ++.++++||+.|...
T Consensus       172 ~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~n  214 (330)
T PLN02421        172 KEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYS  214 (330)
T ss_pred             HHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCC
Confidence               1 112    689999999999985 478999999988653

>PLN02236 choline kinase

Probab=97.72  E-value=0.00034  Score=59.64  Aligned_cols=141  Identities=17%  Similarity=0.153  Sum_probs=80.9

Q ss_pred             EeecccCccEEEEEEEeCC----CCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           97 LSKMGEGTFGQVVECFDNE----KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      ...|..|-...+|++....    .++.+++|+........-.-..|..+++.+...++.    .++++.+...    .|.
T Consensus        41 i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl~----P~~~~~~~~g----~v~  112 (344)
T PLN02236         41 VIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQG----PRLLGRFPNG----RVE  112 (344)
T ss_pred             EEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCCC----CceEEEECCc----eEE
Confidence            4456557778899987432    246789998764332222236699999999887763    3344444332    578


Q ss_pred             ecC-CCCHHHH--------------HH---hcC--CCC-CC-HHHHHHHHHHH-----------------HHHHHHH---
Q 024661          173 EKL-GPSLYDF--------------LR---KNS--YRS-FP-IDLVRELGRQL-----------------LESVAFM---  210 (264)
Q Consensus       173 e~~-~~~L~~~--------------l~---~~~--~~~-~~-~~~~~~i~~qi-----------------~~~l~~l---  210 (264)
                      +|+ +.+|...              +.   +..  ... .+ ...+..+..++                 ...+..|   
T Consensus       113 efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~  192 (344)
T PLN02236        113 EFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKE  192 (344)
T ss_pred             EeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHH
Confidence            888 5444211              01   111  000 11 22232332221                 1111122   


Q ss_pred             -HH----CCCeecCCCCCCEEeec-CCcEEeccCCCCCcCC
Q 024661          211 -HE----LRLIHTDLKPENILLVS-AEYVKVPDYKVPSPRH  245 (264)
Q Consensus       211 -H~----~~ivH~dikp~Nili~~-~~~v~l~Dfg~a~~~~  245 (264)
                       ..    ..++|+|+++.|||+++ ++.+.|+||..|....
T Consensus       193 ~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~~  233 (344)
T PLN02236        193 LSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASYNP  233 (344)
T ss_pred             hcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccccc
Confidence             11    25899999999999986 4789999999987644

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=97.66  E-value=0.00015  Score=62.00  Aligned_cols=159  Identities=15%  Similarity=0.166  Sum_probs=95.5

Q ss_pred             EEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHH-hccCCCCcceEEEce--eeeeCC-EEEEE
Q 024661           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRN--WFDYRN-HICIV  171 (264)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~--~~~~~~-~~~lv  171 (264)
                      .+..||+|+-+.+|..-..  +. .+.|++....-..+.-  .+..|... .|+.+. ..++.-..  +..++. ..-++
T Consensus        15 ~gr~LgqGgea~ly~l~e~--~d-~VAKIYh~Pppa~~aq--k~a~la~~p~~p~~~-~rvaWPqa~L~G~~~~~~iGfl   88 (637)
T COG4248          15 PGRPLGQGGEADLYTLGEV--RD-QVAKIYHAPPPAAQAQ--KVAELAATPDAPLLN-YRVAWPQATLHGGRRGKVIGFL   88 (637)
T ss_pred             CCccccCCccceeeecchh--hc-hhheeecCCCchHHHH--HHHHhccCCCCcchh-hhhcccHHHhhCCCccceeEEe
Confidence            4678999999999865432  22 3457776432211111  11112221 122110 00011100  111222 36788


Q ss_pred             EecC-C-CCHHHHHH----hcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEecc---CCCCC
Q 024661          172 FEKL-G-PSLYDFLR----KNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD---YKVPS  242 (264)
Q Consensus       172 ~e~~-~-~~L~~~l~----~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~D---fg~a~  242 (264)
                      |..+ + ..+..+.+    ......+++..+++.++.++.+..-||+.|.+-+|++++|+|+.+++.|.|.|   |.+..
T Consensus        89 mP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~  168 (637)
T COG4248          89 MPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINA  168 (637)
T ss_pred             cccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccceeecc
Confidence            9998 3 34555544    12223578999999999999999999999999999999999999999999986   44331


Q ss_pred             c--CCCCcccceeeeeceeE
Q 024661          243 P--RHAFSFQTFLSMASRVY  260 (264)
Q Consensus       243 ~--~~~~~~~~~~y~ape~~  260 (264)
                      .  .+....+...|..||.-
T Consensus       169 ng~~~~cpVg~~eftPPElQ  188 (637)
T COG4248         169 NGTLHLCPVGVSEFTPPELQ  188 (637)
T ss_pred             CCceEecccCccccCCHHHh
Confidence            1  11223466678888853

>PRK11768 serine/threonine protein kinase; Provisional

Probab=97.66  E-value=0.0025  Score=53.97  Aligned_cols=69  Identities=16%  Similarity=0.100  Sum_probs=44.1

Q ss_pred             EEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEce--eeeeCCEEEEEEecC
Q 024661          106 GQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRN--WFDYRNHICIVFEKL  175 (264)
Q Consensus       106 g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~--~~~~~~~~~lv~e~~  175 (264)
                      ..||+... .++..+++|+.+........+..|++.+..+....+.-+.-+..-+  ....++..+.+++++
T Consensus        39 N~vy~v~~-~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~gipv~~p~~~~G~~~~~~~g~~~~l~~~~  109 (325)
T PRK11768         39 NRVYQFGD-EDGRRVVAKFYRPERWSDAQILEEHAFALELAEAEIPVVAPLAFNGQTLHEHQGFRFALFPRR  109 (325)
T ss_pred             ceEEEEec-CCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHCCCCCCCCccCCCCEEEEECCEEEEEEeee
Confidence            46888764 3456789998764444556777899999998876553111122222  223356788999998

>PRK12396 5-methylribose kinase; Reviewed

Probab=97.63  E-value=0.00059  Score=58.64  Aligned_cols=75  Identities=23%  Similarity=0.254  Sum_probs=50.7

Q ss_pred             EeecccCccEEEEEEEeCCCCcEEEEEEEe-------chhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVR-------SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~-------~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      .+.||.|.-..||++.+...++.++||.-.       ......++...|.+.|+......  ...+.+++  +.+.....
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~--P~~VP~vy--~~D~e~~~  109 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELA--PGLVPKVY--LFDSVMNC  109 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhC--CCcCCeEE--EECcHHhh
Confidence            568999999999999985445679998532       12345566777888888765421  12234444  34556677


Q ss_pred             EEEecC
Q 024661          170 IVFEKL  175 (264)
Q Consensus       170 lv~e~~  175 (264)
                      +|||++
T Consensus       110 ~vMEdL  115 (409)
T PRK12396        110 CVMEDL  115 (409)
T ss_pred             HHHHhC
Confidence            899998

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=97.62  E-value=0.00095  Score=55.09  Aligned_cols=33  Identities=24%  Similarity=0.372  Sum_probs=27.3

Q ss_pred             CCeecCCCCCCEEeecCCc-EEeccCCCCCcCCC
Q 024661          214 RLIHTDLKPENILLVSAEY-VKVPDYKVPSPRHA  246 (264)
Q Consensus       214 ~ivH~dikp~Nili~~~~~-v~l~Dfg~a~~~~~  246 (264)
                      .++|+|+++.|||++.+++ .-|+||+.+....+
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iGDP  219 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKVGDP  219 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhcccCCH
Confidence            4899999999999997565 46999999876543

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=97.59  E-value=8.5e-06  Score=72.52  Aligned_cols=152  Identities=18%  Similarity=0.127  Sum_probs=108.0

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEe
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE  173 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e  173 (264)
                      |.....+++++++++++.+...+.... .+++...    ....-++++|.+++|||.    .+..++-++.+.+.++.++
T Consensus       244 s~~fh~fvK~altknpKkRptaeklL~-h~fvs~~----l~~rl~~eLLdK~n~P~~----~v~~~~d~~~E~~~~i~~~  314 (829)
T KOG0576|consen  244 SEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT----LSRRLAIELLDKVNNPNP----VVRYLEDYDGEDYLWIPMR  314 (829)
T ss_pred             hHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc----hhhHHHHHHHHHccCCCC----cccccccCCcccccchhhh
Confidence            556677999999999999887776544 6665433    344558899999999982    2667777777889999999


Q ss_pred             cC-CC-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-----
Q 024661          174 KL-GP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-----  246 (264)
Q Consensus       174 ~~-~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-----  246 (264)
                      ++ ++ +-........ ..+.+-....+.+.-+.+++++|+.--+|+|    ||+..+ +..++.||+.......     
T Consensus       315 i~s~~rs~~~~~~~se-~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~~~~  388 (829)
T KOG0576|consen  315 ICSTGRSSALEMTVSE-IALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTMKPR  388 (829)
T ss_pred             hhcCCccccccCChhh-HhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCcccCcccccc
Confidence            99 44 2221111110 1244445566677788899999988778888    766554 7889999998876544     


Q ss_pred             CcccceeeeeceeE
Q 024661          247 FSFQTFLSMASRVY  260 (264)
Q Consensus       247 ~~~~~~~y~ape~~  260 (264)
                      ...++..+|+||+.
T Consensus       389 t~~~~~~~~~pev~  402 (829)
T KOG0576|consen  389 TAIGTPEPLAPEVI  402 (829)
T ss_pred             cCCCCCCCCCchhh
Confidence            34578889999953

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=97.55  E-value=0.00079  Score=56.29  Aligned_cols=147  Identities=14%  Similarity=0.140  Sum_probs=82.3

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEe---chhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC--EE
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN--HI  168 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~---~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~--~~  168 (264)
                      ..+.+++..|....+|...+.  ++.++++ ..   ..........+|..+++.+....++   +...++.+..+.  ..
T Consensus        27 ~~~v~~~~~G~sn~t~~~~~~--~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP---~p~~~~~~~~~~~g~p  100 (321)
T COG3173          27 LLIVEEISGGWSNDTFRLGDT--GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVP---VPRAFGLCGEGYLGTP  100 (321)
T ss_pred             CceeeeccCCcccceEEEecC--CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCC---CcccccccccCCCCCc
Confidence            334455544444445555443  6677777 22   1123345566788888887664432   234444444443  77


Q ss_pred             EEEEecCCC-------------------CHHHHHHhc--------C--C--CCCCHHHHHHHHHHH--------------
Q 024661          169 CIVFEKLGP-------------------SLYDFLRKN--------S--Y--RSFPIDLVRELGRQL--------------  203 (264)
Q Consensus       169 ~lv~e~~~~-------------------~L~~~l~~~--------~--~--~~~~~~~~~~i~~qi--------------  203 (264)
                      |.||+++.|                   +|.++|..-        .  +  ..+....+..+..+.              
T Consensus       101 f~v~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~  180 (321)
T COG3173         101 FYVMEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLA  180 (321)
T ss_pred             eEEEEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchH
Confidence            999999933                   222222210        0  0  001111122222222              


Q ss_pred             HHHHHHHHHC--------CCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          204 LESVAFMHEL--------RLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       204 ~~~l~~lH~~--------~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      .....+++.+        .++|+|+++.|++++.++-+-|.||+.+....+
T Consensus       181 ~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP  231 (321)
T COG3173         181 DRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGDP  231 (321)
T ss_pred             HHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccCCc
Confidence            2223455443        489999999999999999899999999987655

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=97.51  E-value=0.005  Score=51.65  Aligned_cols=30  Identities=30%  Similarity=0.282  Sum_probs=26.1

Q ss_pred             CCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          213 LRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       213 ~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      .+++|+|+.+.||+++. +.+.|+||+.+..
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~  216 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCTI  216 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECccccc
Confidence            47899999999999987 6789999997654

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PLN02756 S-methyl-5-thioribose kinase

Probab=97.40  E-value=0.0036  Score=54.16  Aligned_cols=73  Identities=16%  Similarity=0.142  Sum_probs=47.1

Q ss_pred             EeecccCccEEEEEEEeCCCCcEEEEEEEe-----ch---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVR-----SI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~-----~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      .+.||.|....||+..+.  +..++||.-.     ..   .....+...|.+.|+.+....  ...+.+++.+..  +.-
T Consensus        37 ~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~--p~~VPkVy~~de--d~~  110 (418)
T PLN02756         37 IKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLC--PDHVPEVYHFDR--TMA  110 (418)
T ss_pred             EEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcC--CCCCCeEEEECC--CCC
Confidence            668999999999998863  4458888643     11   123445556777777665321  123466665555  456


Q ss_pred             EEEEecC
Q 024661          169 CIVFEKL  175 (264)
Q Consensus       169 ~lv~e~~  175 (264)
                      +++||++
T Consensus       111 vlvME~L  117 (418)
T PLN02756        111 LIGMRYL  117 (418)
T ss_pred             EEEEeec
Confidence            7889999

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=97.38  E-value=0.00062  Score=57.38  Aligned_cols=74  Identities=14%  Similarity=0.139  Sum_probs=58.1

Q ss_pred             eCCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          164 YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       164 ~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                      ...+.|++|++-|++|.-.-      ....+++..++.+.+..++-+..+ ..-|||+..+||||+ +|+|.|+||-+++
T Consensus       297 e~~y~yl~~kdhgt~is~ik------~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsR  369 (488)
T COG5072         297 ETLYLYLHFKDHGTPISIIK------ADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSR  369 (488)
T ss_pred             CceEEEEEEecCCceeeeee------cccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeee
Confidence            34577899998888776431      234567778888877777766644 689999999999999 9999999999998


Q ss_pred             cC
Q 024661          243 PR  244 (264)
Q Consensus       243 ~~  244 (264)
                      ..
T Consensus       370 l~  371 (488)
T COG5072         370 LS  371 (488)
T ss_pred             cc
Confidence            53

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.33  E-value=0.0001  Score=66.29  Aligned_cols=62  Identities=15%  Similarity=0.344  Sum_probs=49.3

Q ss_pred             HHHHHHHHHHHH-CCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC--------Cc-------ccceeeeeceeEee
Q 024661          201 RQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA--------FS-------FQTFLSMASRVYIC  262 (264)
Q Consensus       201 ~qi~~~l~~lH~-~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~--------~~-------~~~~~y~ape~~~~  262 (264)
                      .+++.||.|+|. .++||++|.|++|.++..+.+||+.|+++....+        ++       .....|.|||++..
T Consensus       106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~  183 (700)
T KOG2137|consen  106 GNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG  183 (700)
T ss_pred             hcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence            445599999995 5899999999999999999999999998876444        11       12345999998653

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=97.29  E-value=0.002  Score=53.41  Aligned_cols=75  Identities=16%  Similarity=0.213  Sum_probs=49.4

Q ss_pred             EEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEec
Q 024661           95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEK  174 (264)
Q Consensus        95 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  174 (264)
                      +-.+.++.|....+|+..  .+++.+.+|+-.  ......+..|.+-|+.|...+-  ..+.+++.+....+.-||||||
T Consensus        20 ~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~--~~~~~~f~~Ea~gL~~L~~~~~--~~vP~vi~~G~~~~~~fLlle~   93 (288)
T PF03881_consen   20 TSIEPVSGGDINEAYRLD--TDGGSYFVKVNS--ESGRDMFEGEAEGLKALAEANP--IRVPKVIAWGEYDDDAFLLLEF   93 (288)
T ss_dssp             -EEEEE--SSSSEEEEEE--TTS-EEEEEEEE--GGGCCHHHHHHHHHHHHCHTTT--SBS--EEEEEE-SSCCEEEEE-
T ss_pred             eeeEecCCCChhheEEEE--CCCccEEEEecC--hhhHHHHHHHHHHHHHHHhcCC--CCCCeEEEEEeecCCceEEEEe
Confidence            335678888899999887  567789999765  4445677889999999955432  3447777777777777999999


Q ss_pred             C
Q 024661          175 L  175 (264)
Q Consensus       175 ~  175 (264)
                      +
T Consensus        94 l   94 (288)
T PF03881_consen   94 L   94 (288)
T ss_dssp             -
T ss_pred             e
Confidence            9

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PTZ00384 choline kinase; Provisional

Probab=97.26  E-value=0.0061  Score=52.70  Aligned_cols=75  Identities=21%  Similarity=0.278  Sum_probs=44.0

Q ss_pred             EeecccCccEEEEEEEeCCC-Cc-----EEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           97 LSKMGEGTFGQVVECFDNEK-KE-----LVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~-~~-----~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      .+.|..|-...+|++..... +.     .|.+++........-.-.+|+++++.+...++.    .++++.+..    ++
T Consensus        55 i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~glg----P~l~~~f~~----g~  126 (383)
T PTZ00384         55 IKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNNFG----PKIIGRFGD----FT  126 (383)
T ss_pred             EEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCCCC----CeEEEecCC----EE
Confidence            34565677788999875432 12     244443322222112235689999999887764    455555543    58


Q ss_pred             EEecC-CCCH
Q 024661          171 VFEKL-GPSL  179 (264)
Q Consensus       171 v~e~~-~~~L  179 (264)
                      +.||+ |.+|
T Consensus       127 l~efIeGr~l  136 (383)
T PTZ00384        127 IQEWVEGNTM  136 (383)
T ss_pred             EEEEeccccC
Confidence            89998 5443

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=97.20  E-value=0.0027  Score=50.14  Aligned_cols=30  Identities=33%  Similarity=0.486  Sum_probs=21.5

Q ss_pred             CCeecCCCCCCEEe-ecCCcEEeccCCCCCc
Q 024661          214 RLIHTDLKPENILL-VSAEYVKVPDYKVPSP  243 (264)
Q Consensus       214 ~ivH~dikp~Nili-~~~~~v~l~Dfg~a~~  243 (264)
                      .++|+|+.+.|||+ +.++.++|+||..|..
T Consensus       144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             eEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            47899999999999 8889999999998864

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=97.02  E-value=0.0076  Score=50.93  Aligned_cols=141  Identities=20%  Similarity=0.194  Sum_probs=83.0

Q ss_pred             ecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcc-eEEEceee--eeCC--EEEEEEe
Q 024661           99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR-CVQIRNWF--DYRN--HICIVFE  173 (264)
Q Consensus        99 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~-~~~~~~~~--~~~~--~~~lv~e  173 (264)
                      .|.+ .-..+|+..... |+ +++|+.+.. .....+..|...+..+....+.-+. +...-+-.  .-..  +.+-+++
T Consensus        33 ~l~s-~eN~~f~~~~~~-g~-~iLki~~~~-~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~  108 (331)
T COG2334          33 GLNS-EENSNFRVQTED-GR-YILKIYRPG-WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFE  108 (331)
T ss_pred             cccc-ccCceEEEEecC-CC-eEEEEecCC-CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEE
Confidence            3444 345688876543 33 499988876 6677888899999999876652211 22222211  1134  7888999


Q ss_pred             cC-CCCHHH------------HHH---h-cCCC---------CCCHH-------------HHHHHHHHHHHHHHHHHHC-
Q 024661          174 KL-GPSLYD------------FLR---K-NSYR---------SFPID-------------LVRELGRQLLESVAFMHEL-  213 (264)
Q Consensus       174 ~~-~~~L~~------------~l~---~-~~~~---------~~~~~-------------~~~~i~~qi~~~l~~lH~~-  213 (264)
                      |+ |..+..            .+-   . ....         ...+.             .-.....++...++.+.+. 
T Consensus       109 ~l~G~~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~  188 (331)
T COG2334         109 YLPGRPLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARL  188 (331)
T ss_pred             ecCCcCcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhc
Confidence            99 554441            110   0 0000         01111             0011233444445544442 


Q ss_pred             -------C--CeecCCCCCCEEeecCCc-EEeccCCCCCc
Q 024661          214 -------R--LIHTDLKPENILLVSAEY-VKVPDYKVPSP  243 (264)
Q Consensus       214 -------~--ivH~dikp~Nili~~~~~-v~l~Dfg~a~~  243 (264)
                             +  +||+|+.+.||+++.+.. +.++||+-|..
T Consensus       189 ~~~lp~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~  228 (331)
T COG2334         189 PAHLPALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAGY  228 (331)
T ss_pred             hhhCCcccceeeecCCCccceeEcCCCCeeeEEEcccccc
Confidence                   3  999999999999998885 88999998764

>PRK06148 hypothetical protein; Provisional

Probab=96.89  E-value=0.024  Score=55.31  Aligned_cols=143  Identities=17%  Similarity=0.154  Sum_probs=77.9

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhcc--CCCCcceEEEc-e----eeee-CC--E
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH--DIGGTRCVQIR-N----WFDY-RN--H  167 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~--~~~~~~~~~~~-~----~~~~-~~--~  167 (264)
                      +.|+. ..-..|+... .+|..+++|+.+... .......|...+..+...  .+.-+.++... +    ...+ ++  .
T Consensus        31 ~~L~s-~~d~nf~v~~-~~g~~yVLKi~~~~~-~~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~  107 (1013)
T PRK06148         31 TPLDG-ERDLNFRLTT-DDGADYILKIVNPSE-PRVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPR  107 (1013)
T ss_pred             eecCC-cCCceEEEEe-CCCCeEEEEEcCCcc-chhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceE
Confidence            45543 3456777753 456679999987532 233445566777777653  44333333322 1    1111 12  5


Q ss_pred             EEEEEecC-CCCHHHH--------------HH-------hcCC----CCCCHH-----------------HHHHHHHHHH
Q 024661          168 ICIVFEKL-GPSLYDF--------------LR-------KNSY----RSFPID-----------------LVRELGRQLL  204 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~--------------l~-------~~~~----~~~~~~-----------------~~~~i~~qi~  204 (264)
                      .+.+++|+ |..+.+.              +.       ....    ..+.|.                 ..+.++.+++
T Consensus       108 ~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~Wdl~~~~~l~~~l~~i~d~~~r~~l~~~~  187 (1013)
T PRK06148        108 LLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDWDLRHAGRARDRLHFIDDPEDRALVERFL  187 (1013)
T ss_pred             EEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccchhhhhhhhhcCCHHHHHHHHHHH
Confidence            77899999 6555541              10       0000    001111                 1122233333


Q ss_pred             HHHH-----HHH--HCCCeecCCCCCCEEeecCC--cEE-eccCCCCCc
Q 024661          205 ESVA-----FMH--ELRLIHTDLKPENILLVSAE--YVK-VPDYKVPSP  243 (264)
Q Consensus       205 ~~l~-----~lH--~~~ivH~dikp~Nili~~~~--~v~-l~Dfg~a~~  243 (264)
                      +...     .+.  ..++||+|+.+.|||++.++  ++. |+|||-+..
T Consensus       188 ~~~~~~v~p~l~~Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~  236 (1013)
T PRK06148        188 ARFERNVAPRLAALPAQVIHNDANDYNILVDADDGERISGLIDFGDAVH  236 (1013)
T ss_pred             HHHHHHHHHHHhcCCcceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence            3322     121  24799999999999999875  565 999998765

>PTZ00296 choline kinase; Provisional

Probab=96.73  E-value=0.026  Score=49.80  Aligned_cols=74  Identities=20%  Similarity=0.170  Sum_probs=46.6

Q ss_pred             EEeecccCccEEEEEEEeCCC--------CcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           96 ILSKMGEGTFGQVVECFDNEK--------KELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      -.+.|..|-.-.+|++.....        ++.|++|+.-......-.-..|..+++.+...++..    ++++.+.    
T Consensus       109 ~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~v~~~ls~~gi~P----~l~~~f~----  180 (442)
T PTZ00296        109 RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFEVYKTMSKYRIAP----QLLNTFS----  180 (442)
T ss_pred             EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHHHHHHHHHCCCCC----ceEEEeC----
Confidence            345666676778888875421        467888987543332224456899999998887743    3444443    


Q ss_pred             EEEEEecC-CC
Q 024661          168 ICIVFEKL-GP  177 (264)
Q Consensus       168 ~~lv~e~~-~~  177 (264)
                      -+.|.||+ |.
T Consensus       181 gg~I~efi~g~  191 (442)
T PTZ00296        181 GGRIEEWLYGD  191 (442)
T ss_pred             CCEEEEeeCCc
Confidence            24578888 54

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=96.65  E-value=0.013  Score=46.35  Aligned_cols=99  Identities=16%  Similarity=0.197  Sum_probs=63.8

Q ss_pred             EEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHH
Q 024661          120 VAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVR  197 (264)
Q Consensus       120 vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~  197 (264)
                      ..+|.+....  ....-+..+.+++.++..-       +++..-  +...+-+++|+|...-.           ..   .
T Consensus        88 L~lKKi~slp~~~~~~~y~nky~v~ArmhGi-------lrL~ND--n~~~yGvIlE~Cy~~~i-----------~~---~  144 (308)
T PF07387_consen   88 LFLKKIRSLPCCINDALYFNKYRVFARMHGI-------LRLKND--NNYKYGVILERCYKIKI-----------NF---S  144 (308)
T ss_pred             hhhhhccCCCcccchhhhhhhhhHHHHhhhe-------eEeecC--CCceeEEEEeeccCccc-----------ch---h
Confidence            4555554322  1344557788888888543       666532  45567899999932110           00   1


Q ss_pred             HHHHHHHHHHHHHHH--CCCeecCCCCCCEEeecCCcEEeccCCCC
Q 024661          198 ELGRQLLESVAFMHE--LRLIHTDLKPENILLVSAEYVKVPDYKVP  241 (264)
Q Consensus       198 ~i~~qi~~~l~~lH~--~~ivH~dikp~Nili~~~~~v~l~Dfg~a  241 (264)
                      .++..=+.+|.-.|+  .+.+|+|-.|+||+-|..|.+||.|=+.-
T Consensus       145 N~i~agi~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKlVDP~~L  190 (308)
T PF07387_consen  145 NFITAGIKDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKLVDPVCL  190 (308)
T ss_pred             HHHHHhHHHHHHhhccCCCeecCCCChhheeecCCCCEEecChhhh
Confidence            112222456777784  37999999999999999999999997653

The function of this family is unknown.

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.52  E-value=0.035  Score=44.16  Aligned_cols=72  Identities=19%  Similarity=0.190  Sum_probs=48.3

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  175 (264)
                      +++..|.--..|...+.  ...+.+|+=.  ......+..|+.-|+.+...+-  ..+.+++.+..+.++.|+||||+
T Consensus        22 ~~v~gG~inea~~v~dg--~~~~FvK~n~--~~~~~~f~AEa~gL~~la~s~t--i~VP~vi~~G~~~~~sylVle~L   93 (286)
T COG3001          22 EEVSGGDINEAWRLRDG--TDPFFVKCNQ--REQLSMFTAEADGLELLARSNT--ITVPKVIAVGASRDHSYLVLEYL   93 (286)
T ss_pred             cccCCccccceeEeecC--CcceEEEecc--hhhHHHHHHHHHHHHHHHhcCC--ccccceEEecCCCCeeEEEEeec
Confidence            34544444445544432  3457778632  3445677889999998888773  23466777778889999999999

>PRK10271 thiK thiamine kinase; Provisional

Probab=96.25  E-value=0.0039  Score=48.05  Aligned_cols=32  Identities=13%  Similarity=0.314  Sum_probs=27.1

Q ss_pred             CCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          214 RLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       214 ~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      -.+|+|+.|.||++++++ ++|+||+.|....+
T Consensus        78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~gDp  109 (188)
T PRK10271         78 APLHMDVHAGNLVHSASG-LRLIDWEYAGDGDI  109 (188)
T ss_pred             eeecCCCCCccEEEECCC-EEEEeCCcccCCCH
Confidence            368999999999998777 99999999876443

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=96.15  E-value=0.0087  Score=49.18  Aligned_cols=47  Identities=19%  Similarity=0.213  Sum_probs=35.2

Q ss_pred             HHHHHHHHHHHHHHC--CCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          199 LGRQLLESVAFMHEL--RLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       199 i~~qi~~~l~~lH~~--~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      .+..+-.++.-++..  -++|+|+.|+|+|.++.+.++|+||..|....
T Consensus       137 ~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~~D  185 (269)
T COG0510         137 KLKELRRALEEVPKDDLVPCHNDLNPGNLLLTDKGGLFLIDWEYAGLND  185 (269)
T ss_pred             HHHHHHHHhhhcCCCceeeecCCCCccceEEcCCCcEEEEecccCCCcc
Confidence            344444444444433  58999999999999999999999999886543

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=96.10  E-value=0.038  Score=47.69  Aligned_cols=60  Identities=25%  Similarity=0.366  Sum_probs=44.2

Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCCCCCEEeecC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSA  230 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~dikp~Nili~~~  230 (264)
                      ..++=+|. |-++..+++...   ..++....++.-.+.|+..+- -.+++|.|++|.||++--.
T Consensus       320 ~vl~E~~~~Gl~v~~~v~~~~---~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~  381 (565)
T KOG1236|consen  320 LVLVETYERGLSVLRFVKWKS---QPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFN  381 (565)
T ss_pred             ceeeeeccccccHHhhhhccc---ChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEec
Confidence            45555666 778888887653   455667777777777776654 5689999999999999744

>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.00  E-value=0.034  Score=46.57  Aligned_cols=135  Identities=21%  Similarity=0.260  Sum_probs=94.1

Q ss_pred             EeecccCccEEEEEEEeCC----------CCcEEEEEEEech--------------hhhH-------------HHHHHHH
Q 024661           97 LSKMGEGTFGQVVECFDNE----------KKELVAIKIVRSI--------------NKYR-------------EAAMIEI  139 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~----------~~~~vaiK~~~~~--------------~~~~-------------~~~~~e~  139 (264)
                      -..|..|.-+.|+.|.-.+          ....+|||+++..              ..+.             --..+|+
T Consensus       257 ~GiIsTGKEsvvlHAY~GS~E~~~qd~ql~ptecAIKvfKTTLnEFKnRd~YiKDDfRFKDRFSK~NpR~i~~mWAEkEm  336 (531)
T KOG2269|consen  257 DGIISTGKESVVLHAYAGSNEHGHQDPQLSPTECAIKVFKTTLNEFKNRDEYIKDDFRFKDRFSKQNPRGILKMWAEKEM  336 (531)
T ss_pred             hhhhhcCcceEEEEeccCcccccccCcccCchHHHHHHHHHHHHHHhhhhhhhccchhhhhhhcccCcHHHHHHHHHHHH
Confidence            3467888888888873211          1345888876410              0001             1123477


Q ss_pred             HHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecCCCC-H-HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH-HHCCCe
Q 024661          140 DVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPS-L-YDFLRKNSYRSFPIDLVRELGRQLLESVAFM-HELRLI  216 (264)
Q Consensus       140 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~-L-~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~l-H~~~iv  216 (264)
                      ..|.+++.+.++.+.+|.+.       .-.|||-|+|.+ + .--|+   ...++..+....-.|+..++.-| |++.+|
T Consensus       337 hNL~RMq~~GlpcP~vV~lk-------khvLVMsFiGd~~~aAPkLK---~v~l~d~E~~~aY~q~~~~M~~lY~Ec~LV  406 (531)
T KOG2269|consen  337 HNLSRMQKHGLPCPQVVKLK-------KHVLVMSFIGDQGLAAPKLK---NVELTDDERRNAYDQVQSIMCRLYKECLLV  406 (531)
T ss_pred             HHHHHHHhcCCCCCceeeee-------cceEEEEeecCCCCCCcccc---ccccChHHHHHHHHHHHHHHHHHHHhhhee
Confidence            78888998888777777764       347899999432 1 11122   23588888888889999999887 578999


Q ss_pred             ecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          217 HTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       217 H~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                      |.|++--|+|...+ .|.++|..-+.
T Consensus       407 HADlSEyN~Lw~~g-Kvw~IDVsQsv  431 (531)
T KOG2269|consen  407 HADLSEYNLLWTPG-KVWVIDVSQSV  431 (531)
T ss_pred             ecchhhhhheecCC-ceEEEechhcc
Confidence            99999999999876 89999987664

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	264
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		6e-41
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		4e-40
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		5e-40
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		6e-40
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		7e-37
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		8e-37
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		3e-28
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		3e-28
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		6e-28
3llt_A	360	Crystal Structure Of Pf14_0431, Kinase Domain Lengt		2e-27
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		1e-26
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		1e-26
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		1e-26
3beg_A	381	Crystal Structure Of Sr Protein Kinase 1 Complexed		3e-22
1wbp_A	397	Srpk1 Bound To 9mer Docking Motif Peptide Length =		4e-22
2x7g_A	389	Structure Of Human Serine-Arginine-Rich Protein-Spe		4e-22
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		3e-17
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		3e-17
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		1e-14
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-14
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-14
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		5e-14
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		6e-14
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		7e-14
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		8e-14
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		1e-13
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		1e-13
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		1e-13
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		2e-13
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		2e-13
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		2e-13
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-13
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		2e-13
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		2e-13
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-13
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		2e-13
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		2e-13
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		2e-13
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		2e-13
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		2e-13
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		2e-13
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		2e-13
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		2e-13
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		2e-13
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		2e-13
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		2e-13
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		2e-13
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		2e-13
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		2e-13
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		2e-13
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		3e-13
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		4e-13
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		6e-13
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		7e-13
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		7e-13
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		1e-12
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-12
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-12
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		2e-12
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		4e-12
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		6e-12
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		8e-12
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		1e-11
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		1e-11
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		1e-11
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		1e-11
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		1e-11
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-11
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		2e-11
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		2e-11
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		2e-11
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		2e-11
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		2e-11
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		2e-11
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		2e-11
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		2e-11
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		2e-11
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		2e-11
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		3e-11
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		3e-11
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		4e-11
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		4e-11
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		5e-11
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		5e-11
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		6e-11
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		7e-11
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		7e-11
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		1e-10
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		1e-10
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-10
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		1e-10
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		2e-10
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		2e-10
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		2e-10
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		2e-10
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		2e-10
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		2e-10
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		2e-10
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		4e-10
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		4e-10
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		5e-10
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		9e-10
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		1e-09
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		1e-09
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		1e-09
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		1e-09
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		1e-09
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		1e-09
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-09
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		1e-09
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		1e-09
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-09
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		3e-09
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		3e-09
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		3e-09
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		4e-09
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		4e-09
3sv0_A	483	Crystal Structure Of Casein Kinase-1 Like Protein I		5e-09
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		5e-09
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		6e-09
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		6e-09
3uys_A	296	Crystal Structure Of Apo Human Ck1d Length = 296		9e-09
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		9e-09
1ckj_A	317	Casein Kinase I Delta Truncation Mutant Containing		9e-09
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		9e-09
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		1e-08
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		1e-08
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		1e-08
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		1e-08
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-08
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-08
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-08
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		1e-08
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		1e-08
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-08
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		2e-08
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		2e-08
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		2e-08
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		3e-08
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		3e-08
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		3e-08
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		4e-08
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		4e-08
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		4e-08
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		4e-08
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		4e-08
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		4e-08
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		5e-08
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		5e-08
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		6e-08
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		7e-08
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		8e-08
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		8e-08
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		9e-08
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		9e-08
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		9e-08
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		9e-08
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		1e-07
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		1e-07
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		1e-07
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		1e-07
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		1e-07
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		1e-07
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		1e-07
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		1e-07
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		1e-07
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-07
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		1e-07
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		2e-07
4hni_A	296	Crystal Structure Of Ck1e In Complex With Pf4800567		2e-07
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		2e-07
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		2e-07
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		2e-07
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		3e-07
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		4e-07
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		4e-07
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		4e-07
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		4e-07
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		4e-07
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		4e-07
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		5e-07
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		5e-07
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		5e-07
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		5e-07
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		6e-07
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		6e-07
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		6e-07
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		6e-07
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		6e-07
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		6e-07
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		7e-07
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		7e-07
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		7e-07
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		8e-07
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		8e-07
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		8e-07
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		8e-07
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		8e-07
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		9e-07
2pl0_A	289	Lck Bound To Imatinib Length = 289		9e-07
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		1e-06
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		1e-06
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		1e-06
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		1e-06
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		1e-06
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		1e-06
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		1e-06
1eh4_A	298	Binary Complex Of Casein Kinase-1 From S. Pombe Wit		1e-06
2csn_A	297	Binary Complex Of Casein Kinase-1 With Cki7 Length		1e-06
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		1e-06
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		1e-06
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		1e-06
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		1e-06
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		1e-06
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		1e-06
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		1e-06
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		1e-06
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		1e-06
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		1e-06
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		1e-06
3a7f_A	303	Human Mst3 Kinase Length = 303		1e-06
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		1e-06
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-06
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		2e-06
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		2e-06
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		2e-06
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-06
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		2e-06
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		2e-06
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		2e-06
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		2e-06
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		2e-06
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		2e-06
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		2e-06
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		2e-06
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		2e-06
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		2e-06
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-06
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		2e-06
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		2e-06
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-06
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		2e-06
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		3e-06
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		3e-06
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		3e-06
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		3e-06
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		3e-06
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		3e-06
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		3e-06
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		3e-06
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		3e-06
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		3e-06
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		3e-06
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		3e-06
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		3e-06
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		3e-06
2oza_A	356	Structure Of P38alpha Complex Length = 356		3e-06
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		3e-06
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		3e-06
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		3e-06
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		3e-06
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		3e-06
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		3e-06
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		3e-06
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		3e-06
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		3e-06
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		3e-06
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		3e-06
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		3e-06
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		3e-06
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		4e-06
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		4e-06
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		4e-06
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		4e-06
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		4e-06
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		4e-06
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		4e-06
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		5e-06
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		5e-06
4hgl_A	330	Crystal Structure Of Ck1g3 With Compound 1 Length =		5e-06
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		5e-06
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		5e-06
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		5e-06
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		5e-06
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		5e-06
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		5e-06
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		5e-06
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		5e-06
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		5e-06
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		5e-06
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		5e-06
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		5e-06
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		5e-06
2chl_A	351	Structure Of Casein Kinase 1 Gamma 3 Length = 351		5e-06
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		5e-06
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		5e-06
2izr_A	330	Structure Of Casein Kinase Gamma 3 In Complex With		5e-06
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		6e-06
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		6e-06
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		6e-06
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		6e-06
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		6e-06
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		6e-06
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		6e-06
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		6e-06
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		6e-06
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		6e-06
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		6e-06
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		6e-06
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		6e-06
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		7e-06
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		7e-06
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		7e-06
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		7e-06
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		7e-06
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		7e-06
2c47_A	313	Structure Of Casein Kinase 1 Gamma 2 Length = 313		7e-06
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		7e-06
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		7e-06
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		7e-06
2oza_B	366	Structure Of P38alpha Complex Length = 366		7e-06
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		7e-06
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		7e-06
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		7e-06
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		7e-06
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		7e-06
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		7e-06
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		7e-06
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		7e-06
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		8e-06
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		8e-06
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		8e-06
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		8e-06
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		8e-06
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		8e-06
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		8e-06
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		8e-06
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		8e-06
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		8e-06
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		9e-06
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		9e-06
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		9e-06
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		9e-06
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		9e-06
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		9e-06
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		9e-06
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		9e-06
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		1e-05
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		1e-05
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		1e-05
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		1e-05
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		1e-05
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		1e-05
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		1e-05
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		1e-05
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		1e-05
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		1e-05
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		1e-05
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		1e-05
4ae6_A	343	Structure And Function Of The Human Sperm-specific		1e-05
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		1e-05
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		1e-05
2cmw_A	310	Structure Of Human Casein Kinase 1 Gamma-1 In Compl		1e-05
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		1e-05
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		1e-05
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		1e-05
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		1e-05
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		1e-05
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		1e-05
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		1e-05
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		1e-05
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		1e-05
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		1e-05
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		1e-05
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		1e-05
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		1e-05
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		1e-05
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		1e-05
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		1e-05
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		1e-05
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		1e-05
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		1e-05
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		1e-05
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		1e-05
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		1e-05
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		1e-05
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-05
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		1e-05
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		2e-05
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		2e-05
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		2e-05
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		2e-05
3hec_A	348	P38 In Complex With Imatinib Length = 348		2e-05
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		2e-05
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		2e-05
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		2e-05
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		2e-05
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		2e-05
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		2e-05
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		2e-05
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		2e-05
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		2e-05
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		2e-05
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		2e-05
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		2e-05
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		2e-05
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		2e-05
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		2e-05
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		2e-05
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		2e-05
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		2e-05
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		2e-05
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		2e-05
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		2e-05
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		2e-05
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		2e-05
3a4o_X	286	Lyn Kinase Domain Length = 286		2e-05
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		2e-05
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		2e-05
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		2e-05
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		2e-05
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		2e-05
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		2e-05
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		2e-05
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		2e-05
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		2e-05
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		2e-05
2v62_A	345	Structure Of Vaccinia-Related Kinase 2 Length = 345		2e-05
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		2e-05
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		2e-05
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		2e-05
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		2e-05
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		2e-05
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		2e-05
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		2e-05
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		2e-05
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		2e-05
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		2e-05
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		2e-05
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		2e-05
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		2e-05
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-05
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		2e-05
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		2e-05
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		2e-05
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		2e-05
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		2e-05
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		2e-05
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		2e-05
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		2e-05
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		2e-05
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		2e-05
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		2e-05
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		2e-05
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		2e-05
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		2e-05
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		2e-05
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		2e-05
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		2e-05
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		2e-05
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		2e-05
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		3e-05
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		3e-05
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		3e-05
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		3e-05
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		3e-05
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		3e-05
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		3e-05
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		3e-05
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		3e-05
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		3e-05
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		3e-05
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		3e-05
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		3e-05
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		4e-05
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		4e-05
3bi6_A	287	Wee1 Kinase Complex With Inhibitor Pd352396 Length		4e-05
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		4e-05
3g51_A	325	Structural Diversity Of The Active Conformation Of		4e-05
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		4e-05
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		4e-05
4ae9_A	343	Structure And Function Of The Human Sperm-specific		4e-05
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		4e-05
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		4e-05
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		4e-05
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		4e-05
1x8b_A	289	Structure Of Human Wee1a Kinase: Kinase Domain Comp		4e-05
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		4e-05
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		4e-05
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		5e-05
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		5e-05
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		5e-05
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		5e-05
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		5e-05
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		5e-05
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		5e-05
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		5e-05
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		5e-05
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		5e-05
2in6_A	287	Wee1 Kinase Complex With Inhibitor Pd311839 Length		5e-05
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		5e-05
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		5e-05
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		5e-05
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		5e-05
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		5e-05
2z2w_A	285	Humand Wee1 Kinase Complexed With Inhibitor Pf03357		5e-05
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		5e-05
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		5e-05
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		5e-05
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		6e-05
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		6e-05
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		6e-05
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		6e-05
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		6e-05
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		6e-05
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		6e-05
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		6e-05
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		6e-05
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		6e-05
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		6e-05
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		6e-05
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		6e-05
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		6e-05
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		6e-05
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		6e-05
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		6e-05
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		6e-05
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		6e-05
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		7e-05
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		7e-05
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		7e-05
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		7e-05
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		7e-05
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		7e-05
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		7e-05
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		7e-05
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		7e-05
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		7e-05
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		7e-05
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		7e-05
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		7e-05
4exu_A	371	Mapk13, Inactive Form Length = 371		7e-05
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		7e-05
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		7e-05
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		8e-05
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		8e-05
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		8e-05
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		8e-05
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		8e-05
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		8e-05
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		8e-05
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		8e-05
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		8e-05
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		9e-05
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		9e-05
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		1e-04
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		1e-04
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		1e-04
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		1e-04
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		1e-04
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		1e-04
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		1e-04
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		1e-04
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		1e-04
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		1e-04
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		1e-04
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		1e-04
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		1e-04
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		1e-04
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		1e-04
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		1e-04
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		1e-04
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		1e-04
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		1e-04
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		1e-04
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		1e-04
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		1e-04
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		1e-04
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		1e-04
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		1e-04
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		1e-04
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		1e-04
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		1e-04
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		1e-04
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		1e-04
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		1e-04
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-04
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		1e-04
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		1e-04
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		1e-04
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		1e-04
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		1e-04
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		1e-04
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		1e-04
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-04
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		2e-04
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		2e-04
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		2e-04
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		2e-04
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		2e-04
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		2e-04
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		2e-04
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		2e-04
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		2e-04
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		2e-04
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		2e-04
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		2e-04
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		2e-04
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		2e-04
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		2e-04
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-04
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		2e-04
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		2e-04
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		2e-04
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		2e-04
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		2e-04
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		2e-04
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		2e-04
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		2e-04
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-04
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		2e-04
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		2e-04
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		2e-04
3soa_A	444	Full-Length Human Camkii Length = 444		2e-04
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		2e-04
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		2e-04
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		2e-04
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		2e-04
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		2e-04
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		2e-04
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		3e-04
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		3e-04
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		3e-04
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		3e-04
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		3e-04
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		4e-04
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		4e-04
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		4e-04
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		4e-04
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		4e-04
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		4e-04
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		4e-04
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		4e-04
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		4e-04
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		5e-04
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		5e-04
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		5e-04
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		5e-04
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		5e-04
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		5e-04
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		5e-04
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		6e-04
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		6e-04
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		6e-04
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		6e-04
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		6e-04
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		7e-04
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		7e-04
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		7e-04
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		8e-04
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		8e-04
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		8e-04
4h58_A	275	Braf In Complex With Compound 3 Length = 275		8e-04
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		8e-04
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		8e-04
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		8e-04
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		8e-04
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		8e-04
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		9e-04
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		9e-04
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		9e-04
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		9e-04

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score =  164 bits (414), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 76/159 (47%), Positives = 114/159 (71%), Gaps = 2/159 (1%)
Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKEL-VAIKIVRSINKYREA 134
           DD +GH ++ +G+ L  RY I+S +GEGTFG+VV+C D+ +    VA+KI++++ KY+EA
Sbjct: 17  DDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEA 76
Query: 135 AMIEIDVLQRLARHDIGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
           A +EI+VL+++   D      CVQ+ +WFDY  H+CI FE LG S +DFL+ N+Y  +PI
Sbjct: 77  ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 136
Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY 232
             VR +  QL ++V F+H+ +L HTDLKPENIL V+++Y
Sbjct: 137 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDY 175

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score =  161 bits (407), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 75/159 (47%), Positives = 114/159 (71%), Gaps = 2/159 (1%)
Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREA 134
           DDK+GH V  IG+ L  RY I+  +GEGTFG+VVEC D+ + K  VA+KI+R++ KYREA
Sbjct: 35  DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 94
Query: 135 AMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
           A +EI+VL+++   D      CV + +WF++  H+CI FE LG + ++FL++N+++ +P+
Sbjct: 95  ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 154
Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY 232
             VR +  QL  ++ F+HE +L HTDLKPENIL V++E+
Sbjct: 155 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEF 193

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score =  160 bits (406), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 75/159 (47%), Positives = 114/159 (71%), Gaps = 2/159 (1%)
Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREA 134
           DDK+GH V  IG+ L  RY I+  +GEGTFG+VVEC D+ + K  VA+KI+R++ KYREA
Sbjct: 12  DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 71
Query: 135 AMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
           A +EI+VL+++   D      CV + +WF++  H+CI FE LG + ++FL++N+++ +P+
Sbjct: 72  ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 131
Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY 232
             VR +  QL  ++ F+HE +L HTDLKPENIL V++E+
Sbjct: 132 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEF 170

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score =  160 bits (406), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 75/159 (47%), Positives = 114/159 (71%), Gaps = 2/159 (1%)
Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREA 134
           DDK+GH V  IG+ L  RY I+  +GEGTFG+VVEC D+ + K  VA+KI+R++ KYREA
Sbjct: 3   DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 62
Query: 135 AMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
           A +EI+VL+++   D      CV + +WF++  H+CI FE LG + ++FL++N+++ +P+
Sbjct: 63  ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 122
Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY 232
             VR +  QL  ++ F+HE +L HTDLKPENIL V++E+
Sbjct: 123 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEF 161

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score =  150 bits (379), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 74/162 (45%), Positives = 109/162 (67%), Gaps = 2/162 (1%)
Query: 81  HYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKYREAAMIEI 139
           H +   G+ L+ RY I+  +GEG FG+VVEC D++     VA+KIV+++++Y EAA  EI
Sbjct: 3   HLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEI 62
Query: 140 DVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE 198
            VL+ L   D   T RCVQ+  WF++  HICIVFE LG S YDF+++N +  F +D +R+
Sbjct: 63  QVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           +  Q+ +SV F+H  +L HTDLKPENIL V ++Y +  + K+
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKI 164

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score =  150 bits (379), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 74/162 (45%), Positives = 109/162 (67%), Gaps = 2/162 (1%)
Query: 81  HYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKYREAAMIEI 139
           H +   G+ L+ RY I+  +GEG FG+VVEC D++     VA+KIV+++++Y EAA  EI
Sbjct: 3   HLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEI 62
Query: 140 DVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE 198
            VL+ L   D   T RCVQ+  WF++  HICIVFE LG S YDF+++N +  F +D +R+
Sbjct: 63  QVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           +  Q+ +SV F+H  +L HTDLKPENIL V ++Y +  + K+
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKI 164

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score =  121 bits (304), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 109/188 (57%), Gaps = 6/188 (3%)
Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
           DD  G YV    +++  RY +L  +G+G+FGQVV+ +D++  + VA+K+VR+  ++   A
Sbjct: 81  DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 136 MIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
             EI +L+ L + D   T   + +   F +RNHIC+ FE L  +LY+ ++KN ++ F + 
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA--EYVKVPDYKVPSPRHAFSFQTF 252
           LVR+    +L+ +  +H+ R+IH DLKPENILL       +KV D+      H    + +
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ---RVY 257
Query: 253 LSMASRVY 260
             + SR Y
Sbjct: 258 TXIQSRFY 265

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score =  121 bits (304), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 109/188 (57%), Gaps = 6/188 (3%)
Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
           DD  G YV    +++  RY +L  +G+G+FGQVV+ +D++  + VA+K+VR+  ++   A
Sbjct: 81  DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 136 MIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
             EI +L+ L + D   T   + +   F +RNHIC+ FE L  +LY+ ++KN ++ F + 
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA--EYVKVPDYKVPSPRHAFSFQTF 252
           LVR+    +L+ +  +H+ R+IH DLKPENILL       +KV D+      H    + +
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ---RVY 257
Query: 253 LSMASRVY 260
             + SR Y
Sbjct: 258 TXIQSRFY 265

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score =  120 bits (302), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 108/188 (57%), Gaps = 6/188 (3%)
Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
           DD  G YV    +++  RY +L  +G+G FGQVV+ +D++  + VA+K+VR+  ++   A
Sbjct: 81  DDDQGSYVQVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 136 MIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
             EI +L+ L + D   T   + +   F +RNHIC+ FE L  +LY+ ++KN ++ F + 
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA--EYVKVPDYKVPSPRHAFSFQTF 252
           LVR+    +L+ +  +H+ R+IH DLKPENILL       +KV D+      H    + +
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ---RVY 257
Query: 253 LSMASRVY 260
             + SR Y
Sbjct: 258 XXIQSRFY 265

>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360

Iteration: 1
 Score =  119 bits (298), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 59/155 (38%), Positives = 101/155 (65%)
Query: 73  WRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR 132
           ++ DD+  H+ +  G  L   + ++ KMG+GTFG+V+ C   + K+  A+K+VR+I KY 
Sbjct: 16  FQGDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYT 75
Query: 133 EAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFP 192
            +A IE D+L+++   DI     V+    F Y +H+C++FE LGPSLY+ + +N+Y  F 
Sbjct: 76  RSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFH 135
Query: 193 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILL 227
           I+ ++    ++L+++ ++ ++ L HTDLKPENILL
Sbjct: 136 IEDIKLYCIEILKALNYLRKMSLTHTDLKPENILL 170

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 61/157 (38%), Positives = 99/157 (63%), Gaps = 5/157 (3%)
Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA 146
           GE    RY I S +G+G+FGQVV+ +D  ++E VAIKI+++   +   A IE+ +L+ + 
Sbjct: 49  GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108
Query: 147 RHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           +HD       V ++  F +RNH+C+VFE L  +LYD LR  ++R   ++L R+  +Q+  
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 206 SVAFMH--ELRLIHTDLKPENILLVSAE--YVKVPDY 238
           ++ F+   EL +IH DLKPENILL + +   +K+ D+
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDF 205

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 61/157 (38%), Positives = 99/157 (63%), Gaps = 5/157 (3%)
Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA 146
           GE    RY I S +G+G+FGQVV+ +D  ++E VAIKI+++   +   A IE+ +L+ + 
Sbjct: 30  GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 89
Query: 147 RHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           +HD       V ++  F +RNH+C+VFE L  +LYD LR  ++R   ++L R+  +Q+  
Sbjct: 90  KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 149
Query: 206 SVAFMH--ELRLIHTDLKPENILLVSAE--YVKVPDY 238
           ++ F+   EL +IH DLKPENILL + +   +K+ D+
Sbjct: 150 ALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDF 186

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 61/157 (38%), Positives = 99/157 (63%), Gaps = 5/157 (3%)
Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA 146
           GE    RY I S +G+G+FGQVV+ +D  ++E VAIKI+++   +   A IE+ +L+ + 
Sbjct: 49  GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108
Query: 147 RHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           +HD       V ++  F +RNH+C+VFE L  +LYD LR  ++R   ++L R+  +Q+  
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 206 SVAFMH--ELRLIHTDLKPENILLVSAE--YVKVPDY 238
           ++ F+   EL +IH DLKPENILL + +   +K+ D+
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDF 205

>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its Substrate AsfSF2 Length = 381

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 103/171 (60%), Gaps = 11/171 (6%)
Query: 75  PDD--KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR 132
           P+D  K G+++  IG+    RY ++ K+G G F  V   +D + K+ VA+K+V+S   Y 
Sbjct: 2   PNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYT 61
Query: 133 EAAMIEIDVLQRLARHDIGGTR---CVQIRNWFDYR----NHICIVFEKLGPSLYDFLRK 185
           E A+ EI +L+ +   D         VQ+ + F        HIC+VFE LG  L  ++ K
Sbjct: 62  ETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIK 121
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILL-VSAEYVK 234
           ++Y+  P+  V+++ +Q+L+ + ++H + R+IHTD+KPENILL V+ +Y++
Sbjct: 122 SNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIR 172

>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide Length = 397

Iteration: 1
 Score =  101 bits (252), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 60/171 (35%), Positives = 103/171 (60%), Gaps = 11/171 (6%)
Query: 75  PDD--KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR 132
           P+D  K G+++  IG+    RY ++ K+G G F  V   +D + K+ VA+K+V+S   Y 
Sbjct: 18  PNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYT 77
Query: 133 EAAMIEIDVLQRLARHDIGGTR---CVQIRNWFDYR----NHICIVFEKLGPSLYDFLRK 185
           E A+ EI +L+ +   D         VQ+ + F        HIC+VFE LG  L  ++ K
Sbjct: 78  ETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIK 137
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILL-VSAEYVK 234
           ++Y+  P+  V+++ +Q+L+ + ++H + R+IHTD+KPENILL V+ +Y++
Sbjct: 138 SNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIR 188

>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific Kinase 2 (Srpk2) Bound To Purvalanol B Length = 389

Iteration: 1
 Score =  101 bits (251), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 96/166 (57%), Gaps = 9/166 (5%)
Query: 78  KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI 137
           K G++   IG+    RY ++ K+G G F  V  C+D + K  VA+K+V+S   Y E A+ 
Sbjct: 17  KGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALD 76
Query: 138 EIDVLQRLARHDIGGTR---CVQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRS 190
           EI +L+ +   D         VQ+ + F        H+C+VFE LG  L  ++ K++Y+ 
Sbjct: 77  EIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQG 136
Query: 191 FPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILL-VSAEYVK 234
            P+  V+ + RQ+L+ + ++H + ++IHTD+KPENIL+ V   YV+
Sbjct: 137 LPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVR 182

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 11/146 (7%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD--- 149
           RY ++ K+G G F  V    D      VA+KIVR    Y EAA  EI +LQR+   D   
Sbjct: 20  RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 150 ---IGGTRCVQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
              +G    +++ + F+++     H+ +VFE LG +L   ++K  +R  P+  V+++ +Q
Sbjct: 80  EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 139
Query: 203 LLESVAFMH-ELRLIHTDLKPENILL 227
           LL  + +MH    +IHTD+KPEN+L+
Sbjct: 140 LLLGLDYMHRRCGIIHTDIKPENVLM 165

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 11/146 (7%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD--- 149
           RY ++ K+G G F  V    D      VA+KIVR    Y EAA  EI +LQR+   D   
Sbjct: 20  RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 150 ---IGGTRCVQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
              +G    +++ + F+++     H+ +VFE LG +L   ++K  +R  P+  V+++ +Q
Sbjct: 80  EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 139
Query: 203 LLESVAFMH-ELRLIHTDLKPENILL 227
           LL  + +MH    +IHTD+KPEN+L+
Sbjct: 140 LLLGLDYMHRRCGIIHTDIKPENVLM 165

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 81/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L DF+  ++    P+ L++    QLL+ +AF 
Sbjct: 65  -----VKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKPEN+L+ +   +K+ D+
Sbjct: 120 HSHRVLHRDLKPENLLINTEGAIKLADF 147

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 81/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L DF+  ++    P+ L++    QLL+ +AF 
Sbjct: 68  -----VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADF 150

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 81/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 7   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L DF+  ++    P+ L++    QLL+ +AF 
Sbjct: 67  -----VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADF 149

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 68  -----VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKPEN+L+ +   +K+ D+
Sbjct: 123 HSHRVLHRDLKPENLLINTEGAIKLADF 150

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 66  -----VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKPEN+L+ +   +K+ D+
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADF 148

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 7   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 67  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKPEN+L+ +   +K+ D+
Sbjct: 122 HSHRVLHRDLKPENLLINTEGAIKLADF 149

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 73.9 bits (180), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 66  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKPEN+L+ +   +K+ D+
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADF 148

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE +   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 68  -----VKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADF 150

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 12  FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 72  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADF 154

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 9   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 69  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADF 151

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 12  FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 72  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADF 154

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 68  -----VKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADF 150

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 68  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADF 150

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 7   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 67  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADF 149

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 66  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADF 148

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 65  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADF 147

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 68  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADF 150

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 7   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 67  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADF 149

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 65  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADF 147

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 65  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADF 147

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 64  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADF 146

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 65  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADF 147

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 66  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADF 148

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 66  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADF 148

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 64  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADF 146

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 64  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADF 146

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 65  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADF 147

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 64  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADF 146

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 9   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 69  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADF 151

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 65  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADF 147

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 65  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADF 147

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE +   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 64  -----VKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADF 146

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Query: 86  IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI------EI 139
           +G   T RY  ++++G G +G V +  D      VA+K VR  N       +      E+
Sbjct: 3   LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREV 62
Query: 140 DVLQRLARHDIGGTR-----CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
            +L+RL   +          C   R   D    + +VFE +   L  +L K      P +
Sbjct: 63  ALLRRLEAFEHPNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 120
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLS 254
            +++L RQ L  + F+H   ++H DLKPENIL+ S   VK+ D+ +      +S+Q  L+
Sbjct: 121 TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL---ARIYSYQMALT 177

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 80/148 (54%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +I
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ ++F 
Sbjct: 65  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADF 147

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR---EAAMIEIDVLQRLARHD 149
           RYR ++K+GEGT+G+V +  D    E VAIK +R  ++       A+ E+ +L+ L   +
Sbjct: 35  RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           I     +++++   + + + ++FE     L  ++ KN   S  +  ++    QL+  V F
Sbjct: 95  I-----IELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRV--IKSFLYQLINGVNF 147
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
            H  R +H DLKP+N+LL  ++  + P  K+
Sbjct: 148 CHSRRCLHRDLKPQNLLLSVSDASETPVLKI 178

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+  +R           A+ EI +L+ L   +I
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 65  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADF 147

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           ++ + K+GEGT+G V +  +    E+VA+  +R           A+ EI +L+ L   +I
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF 
Sbjct: 64  -----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADF 146

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 13/172 (7%)
Query: 91  TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--------SINKYREAAMIEIDVL 142
           T RY  ++++G G +G V +  D      VA+K VR         I+  RE A++    L
Sbjct: 3   TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLR--RL 60
Query: 143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +     ++     V   +  D    + +VFE +   L  +L K      P + +++L RQ
Sbjct: 61  EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLS 254
            L  + F+H   ++H DLKPENIL+ S   VK+ D+ +      +S+Q  L+
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL---ARIYSYQMALA 169

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 91  TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--------SINKYREAAMIEIDVL 142
           T RY  ++++G G +G V +  D      VA+K VR         I+  RE A++    L
Sbjct: 3   TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLR--RL 60
Query: 143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +     ++     V   +  D    + +VFE +   L  +L K      P + +++L RQ
Sbjct: 61  EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            L  + F+H   ++H DLKPENIL+ S   VK+ D+
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADF 156

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 91  TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE---AAMIEIDVLQRLAR 147
           T RY  ++++G G +G V +  D      VA+K VR  N       + + E+ +L+RL  
Sbjct: 3   TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 148 HDIGGTR-----CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
            +          C   R   D    + +VFE +   L  +L K      P + +++L RQ
Sbjct: 63  FEHPNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            L  + F+H   ++H DLKPENIL+ S   VK+ D+
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADF 156

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 38  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 93
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + +V   +G  LY  L+     +   D +    
Sbjct: 94  ILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSN---DHICYFL 150
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAFSFQTFLSMAS 257
            Q+L  + ++H   ++H DLKP N+LL +   +K+ D+   +V  P H  +      +A+
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 258 RVY 260
           R Y
Sbjct: 211 RWY 213

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 88/165 (53%), Gaps = 13/165 (7%)
Query: 81  HYVFAIGENLTPRYRILSK---MGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAM 136
           H +    +     +  +SK   +G G FGQV +C +      +A KI+++   K +E   
Sbjct: 75  HRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVK 134
Query: 137 IEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDL 195
            EI V+ +L   ++     +Q+ + F+ +N I +V E + G  L+D +   SY    +D 
Sbjct: 135 NEISVMNQLDHANL-----IQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDT 189
Query: 196 VRELGRQLLESVAFMHELRLIHTDLKPENILLVS--AEYVKVPDY 238
           +  + +Q+ E +  MH++ ++H DLKPENIL V+  A+ +K+ D+
Sbjct: 190 ILFM-KQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDF 233

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 22  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIK 77
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 78  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 134
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAFSFQTFLSMAS 257
            Q+L  + ++H   ++H DLKP N+LL +   +K+ D+   +V  P H  +      +A+
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 258 RVY 260
           R Y
Sbjct: 195 RWY 197

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 18  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 74  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 130
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAFSFQTFLSMAS 257
            Q+L  + ++H   ++H DLKP N+LL +   +K+ D+   +V  P H  +      +A+
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVAT 190
Query: 258 RVY 260
           R Y
Sbjct: 191 RWY 193

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 22  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 78  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 134
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAFSFQTFLSMAS 257
            Q+L  + ++H   ++H DLKP N+LL +   +K+ D+   +V  P H  +      +A+
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 258 RVY 260
           R Y
Sbjct: 195 RWY 197

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 18  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 74  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 130
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAFSFQTFLSMAS 257
            Q+L  + ++H   ++H DLKP N+LL +   +K+ D+   +V  P H  +      +A+
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 258 RVY 260
           R Y
Sbjct: 191 RWY 193

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 18  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 74  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 130
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAFSFQTFLSMAS 257
            Q+L  + ++H   ++H DLKP N+LL +   +K+ D+   +V  P H  +      +A+
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 258 RVY 260
           R Y
Sbjct: 191 RWY 193

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 22  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 78  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 134
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAFSFQTFLSMAS 257
            Q+L  + ++H   ++H DLKP N+LL +   +K+ D+   +V  P H  +      +A+
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVAT 194
Query: 258 RVY 260
           R Y
Sbjct: 195 RWY 197

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 23  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 78
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 79  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 135
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAFSFQTFLSMAS 257
            Q+L  + ++H   ++H DLKP N+LL +   +K+ D+   +V  P H  +      +A+
Sbjct: 136 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVAT 195
Query: 258 RVY 260
           R Y
Sbjct: 196 RWY 198

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 20  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 75
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 76  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 132
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAFSFQTFLSMAS 257
            Q+L  + ++H   ++H DLKP N+LL +   +K+ D+   +V  P H  +      +A+
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 258 RVY 260
           R Y
Sbjct: 193 RWY 195

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 26  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 81
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 82  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 138
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAFSFQTFLSMAS 257
            Q+L  + ++H   ++H DLKP N+LL +   +K+ D+   +V  P H  +      +A+
Sbjct: 139 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 198
Query: 258 RVY 260
           R Y
Sbjct: 199 RWY 201

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 18  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 74  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 130
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAFSFQTFLSMAS 257
            Q+L  + ++H   ++H DLKP N+LL +   +K+ D+   +V  P H  +      +A+
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 258 RVY 260
           R Y
Sbjct: 191 RWY 193

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 38  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 93
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 94  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 150
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAFSFQTFLSMAS 257
            Q+L  + ++H   ++H DLKP N+LL +   +K+ D+   +V  P H  +      +A+
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 210
Query: 258 RVY 260
           R Y
Sbjct: 211 RWY 213

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 23  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 78
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 79  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 135
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAFSFQTFLSMAS 257
            Q+L  + ++H   ++H DLKP N+LL +   +K+ D+   +V  P H  +      +A+
Sbjct: 136 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 195
Query: 258 RVY 260
           R Y
Sbjct: 196 RWY 198

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 24  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 79
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 80  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 136
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAFSFQTFLSMAS 257
            Q+L  + ++H   ++H DLKP N+LL +   +K+ D+   +V  P H  +      +A+
Sbjct: 137 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 196
Query: 258 RVY 260
           R Y
Sbjct: 197 RWY 199

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 15  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 70
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 71  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 127
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAFSFQTFLSMAS 257
            Q+L  + ++H   ++H DLKP N+LL +   +K+ D+   +V  P H  +      +A+
Sbjct: 128 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 187
Query: 258 RVY 260
           R Y
Sbjct: 188 RWY 190

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 22  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 78  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 134
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAFSFQTFLSMAS 257
            Q+L  + ++H   ++H DLKP N+LL +   +K+ D+   +V  P H  +      +A+
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 258 RVY 260
           R Y
Sbjct: 195 RWY 197

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 18  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 74  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 130
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAFSFQTFLSMAS 257
            Q+L  + ++H   ++H DLKP N+LL +   +K+ D+   +V  P H  +      +A+
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 190
Query: 258 RVY 260
           R Y
Sbjct: 191 RWY 193

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 16  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 71
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 72  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 128
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAFSFQTFLSMAS 257
            Q+L  + ++H   ++H DLKP N+LL +   +K+ D+   +V  P H  +      +A+
Sbjct: 129 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 258 RVY 260
           R Y
Sbjct: 189 RWY 191

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 16  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 71
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 72  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 128
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAFSFQTFLSMAS 257
            Q+L  + ++H   ++H DLKP N+LL +   +K+ D+   +V  P H  +      +A+
Sbjct: 129 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 188
Query: 258 RVY 260
           R Y
Sbjct: 189 RWY 191

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 23/188 (12%)
Query: 91  TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARH 148
           + +++ L K+G GT+  V +  +      VA+K V+  S       A+ EI +++ L   
Sbjct: 4   SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHE 63
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK----NSYRSFPIDLVRELGRQLL 204
           +I     V++ +     N + +VFE +   L  ++      N+ R   ++LV+    QLL
Sbjct: 64  NI-----VRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS----PRHAFSFQTF-------- 252
           + +AF HE +++H DLKP+N+L+     +K+ D+ +      P + FS +          
Sbjct: 119 QGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPD 178
Query: 253 LSMASRVY 260
           + M SR Y
Sbjct: 179 VLMGSRTY 186

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 8/177 (4%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLA 146
           ++ PRY  L  +GEG +G V   +D+ +K  VAIK +       Y +  + EI +L R  
Sbjct: 40  DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFR 99
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
             ++ G R +   +  +    + IV + +   LY  L+     +   D +     Q+L  
Sbjct: 100 HENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSN---DHICYFLYQILRG 156
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAFSFQTFLSMASRVY 260
           + ++H   ++H DLKP N+L+ +   +K+ D+   ++  P H  +      +A+R Y
Sbjct: 157 LKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWY 213

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 22  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 78  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSN---DHICYFL 134
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAFSFQTFLSMAS 257
            Q+L  + ++H   ++H DLKP N+LL +   +K+ D+   +V  P H  +      +A+
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 258 RVY 260
           R Y
Sbjct: 195 RWY 197

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 12/183 (6%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 20  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 75
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L      +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 76  ILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 132
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAFSFQTFLSMAS 257
            Q+L  + ++H   ++H DLKP N+LL +   +K+ D+   +V  P H  +      +A+
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 258 RVY 260
           R Y
Sbjct: 193 RWY 195

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAI+ +       Y +  + EI 
Sbjct: 22  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIK 77
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L R    +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 78  ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 134
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAFSFQTFLSMAS 257
            Q+L  + ++H   ++H DLKP N+LL +   +K+ D+   +V  P H  +      +A+
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 258 RVY 260
           R Y
Sbjct: 195 RWY 197

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 94/187 (50%), Gaps = 16/187 (8%)
Query: 86  IGENLTPR--YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVL 142
           +  +L P   + I+ ++G+G FG+V +  + E   L A K++ + ++   E  M+EID+L
Sbjct: 29  VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
                 +I     V++ + F Y N++ I+ E       D +     R      ++ + +Q
Sbjct: 89  ASCDHPNI-----VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQ---TFLS----M 255
            L+++ ++H+ ++IH DLK  NIL      +K+ D+ V S ++  + Q   +F+     M
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGV-SAKNTRTIQRRDSFIGTPYWM 202
Query: 256 ASRVYIC 262
           A  V +C
Sbjct: 203 APEVVMC 209

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 85/171 (49%), Gaps = 14/171 (8%)
Query: 93  RYRILSKMGEGTFGQVVECFD-NEKKELVAIKIVR--------SINKYREAAMIEIDVLQ 143
           +Y  ++++GEG +G+V +  D       VA+K VR         ++  RE A++    L+
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH--LE 69
Query: 144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQL 203
                ++     V   +  D    + +VFE +   L  +L K      P + ++++  QL
Sbjct: 70  TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLS 254
           L  + F+H  R++H DLKP+NIL+ S+  +K+ D+ +      +SFQ  L+
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA---RIYSFQMALT 177

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 85/171 (49%), Gaps = 14/171 (8%)
Query: 93  RYRILSKMGEGTFGQVVECFD-NEKKELVAIKIVR--------SINKYREAAMIEIDVLQ 143
           +Y  ++++GEG +G+V +  D       VA+K VR         ++  RE A++    L+
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH--LE 69
Query: 144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQL 203
                ++     V   +  D    + +VFE +   L  +L K      P + ++++  QL
Sbjct: 70  TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLS 254
           L  + F+H  R++H DLKP+NIL+ S+  +K+ D+ +      +SFQ  L+
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA---RIYSFQMALT 177

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 85/171 (49%), Gaps = 14/171 (8%)
Query: 93  RYRILSKMGEGTFGQVVECFD-NEKKELVAIKIVR--------SINKYREAAMIEIDVLQ 143
           +Y  ++++GEG +G+V +  D       VA+K VR         ++  RE A++    L+
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH--LE 69
Query: 144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQL 203
                ++     V   +  D    + +VFE +   L  +L K      P + ++++  QL
Sbjct: 70  TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLS 254
           L  + F+H  R++H DLKP+NIL+ S+  +K+ D+ +      +SFQ  L+
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA---RIYSFQMALT 177

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 93/187 (49%), Gaps = 16/187 (8%)
Query: 86  IGENLTPR--YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVL 142
           +  +L P   + I+ ++G+G FG+V +  + E   L A K++ + ++   E  M+EID+L
Sbjct: 29  VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
                 +I     V++ + F Y N++ I+ E       D +     R      ++ + +Q
Sbjct: 89  ASCDHPNI-----VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQ---TFLS----M 255
            L+++ ++H+ ++IH DLK  NIL      +K+ D+ V S ++    Q   +F+     M
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGV-SAKNTRXIQRRDSFIGTPYWM 202
Query: 256 ASRVYIC 262
           A  V +C
Sbjct: 203 APEVVMC 209

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 82/160 (51%), Gaps = 8/160 (5%)
Query: 86  IGENLTPR--YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVL 142
           +  +L P   + I+ ++G+G FG+V +  + E   L A K++ + ++   E  M+EID+L
Sbjct: 29  VTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDIL 88
Query: 143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
                 +I     V++ + F Y N++ I+ E       D +     R      ++ + +Q
Sbjct: 89  ASCDHPNI-----VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
            L+++ ++H+ ++IH DLK  NIL      +K+ D+ V +
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA 183

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 12/183 (6%)
Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID 140
           VF +G    PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI 
Sbjct: 20  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 75
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +L      +I G   +      +    + IV + +   LY  L+     +   D +    
Sbjct: 76  ILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN---DHICYFL 132
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAFSFQTFLSMAS 257
            Q+L  + ++H   ++H DLKP N+LL +   +K+ D+   +V  P H  +      +A+
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 192
Query: 258 RVY 260
           R Y
Sbjct: 193 RWY 195

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 81/149 (54%), Gaps = 9/149 (6%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINK--YREAAMIEIDVLQRLARHD 149
           +Y  + K+GEG++G V +C + +  ++VAIK  + S +    ++ A+ EI +L++L   +
Sbjct: 4   KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           +     V +   F  +  + +VFE    ++   L +   R  P  LV+ +  Q L++V F
Sbjct: 64  L-----VNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNF 117
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDY 238
            H+   IH D+KPENIL+     +K+ D+
Sbjct: 118 CHKHNCIHRDVKPENILITKHSVIKLCDF 146

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR------SINKYREAAMIEIDVLQRLA 146
           RY  L  +GEG F  V +  D    ++VAIK ++      + +     A+ EI +LQ L+
Sbjct: 11  RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
             +I G     + + F ++++I +VF+ +   L   ++ NS    P   ++      L+ 
Sbjct: 71  HPNIIG-----LLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSH-IKAYMLMTLQG 124
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVP----SPRHAFSFQT 251
           + ++H+  ++H DLKP N+LL     +K+ D+ +     SP  A+  Q 
Sbjct: 125 LEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQV 173

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 13/175 (7%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRL 145
               RY I+  +G+G+FG+V++C D   ++  A+K++      NK     + E+++L++L
Sbjct: 19  TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
              +I     +++    +  +   IV E   G  L+D + K   + F       + +Q+ 
Sbjct: 79  DHPNI-----MKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVF 131
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLSMASRV 259
             + +MH+  ++H DLKPENILL S E  K  D K+     +  FQ    M  R+
Sbjct: 132 SGITYMHKHNIVHRDLKPENILLESKE--KDCDIKIIDFGLSTCFQQNTKMKDRI 184

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 13/175 (7%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRL 145
               RY I+  +G+G+FG+V++C D   ++  A+K++      NK     + E+++L++L
Sbjct: 19  TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
              +I     +++    +  +   IV E   G  L+D + K   + F       + +Q+ 
Sbjct: 79  DHPNI-----MKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVF 131
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLSMASRV 259
             + +MH+  ++H DLKPENILL S E  K  D K+     +  FQ    M  R+
Sbjct: 132 SGITYMHKHNIVHRDLKPENILLESKE--KDCDIKIIDFGLSTCFQQNTKMKDRI 184

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDV-LQRLARHDI 150
           Y+I+  +GEG+FG+V   +     + VA+KI+  + + K      IE ++   RL RH  
Sbjct: 10  YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH-- 67
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                +++ +    ++ I +V E  G  L+D++ +    S      R   +Q++ +V + 
Sbjct: 68  --PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE--QEARRFFQQIISAVEYC 123
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  +++H DLKPEN+LL     VK+ D+
Sbjct: 124 HRHKIVHRDLKPENLLLDEHLNVKIADF 151

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDV-LQRLARHDI 150
           Y+I+  +GEG+FG+V   +     + VA+KI+  + + K      IE ++   RL RH  
Sbjct: 15  YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH-- 72
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                +++ +    ++ I +V E  G  L+D++ +    S      R   +Q++ +V + 
Sbjct: 73  --PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE--QEARRFFQQIISAVEYC 128
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  +++H DLKPEN+LL     VK+ D+
Sbjct: 129 HRHKIVHRDLKPENLLLDEHLNVKIADF 156

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDV-LQRLARHDI 150
           Y+I+  +GEG+FG+V   +     + VA+KI+  + + K      IE ++   RL RH  
Sbjct: 16  YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH-- 73
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                +++ +    ++ I +V E  G  L+D++ +    S      R   +Q++ +V + 
Sbjct: 74  --PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE--QEARRFFQQIISAVEYC 129
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  +++H DLKPEN+LL     VK+ D+
Sbjct: 130 HRHKIVHRDLKPENLLLDEHLNVKIADF 157

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 9/148 (6%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDV-LQRLARHDI 150
           Y+I+  +GEG+FG+V   +     + VA+KI+  + + K      IE ++   RL RH  
Sbjct: 6   YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH-- 63
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                +++ +    ++ I +V E  G  L+D++ +    S      R   +Q++ +V + 
Sbjct: 64  --PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE--QEARRFFQQIISAVEYC 119
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H  +++H DLKPEN+LL     VK+ D+
Sbjct: 120 HRHKIVHRDLKPENLLLDEHLNVKIADF 147

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 80  GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV----------RSIN 129
            H      EN  P+      +G G    V  C      +  A+KI+            + 
Sbjct: 9   SHSTHGFYENYEPK----EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ 64
Query: 130 KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSY 188
           + REA + E+D+L++++ H       +Q+++ ++      +VF+ +    L+D+L +   
Sbjct: 65  ELREATLKEVDILRKVSGH----PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV- 119
Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            +      R++ R LLE +  +H+L ++H DLKPENILL     +K+ D+
Sbjct: 120 -TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDF 168

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 80  GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV----------RSIN 129
            H      EN  P+      +G G    V  C      +  A+KI+            + 
Sbjct: 9   SHSTHGFYENYEPK----EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ 64
Query: 130 KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSY 188
           + REA + E+D+L++++ H       +Q+++ ++      +VF+ +    L+D+L +   
Sbjct: 65  ELREATLKEVDILRKVSGH----PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV- 119
Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            +      R++ R LLE +  +H+L ++H DLKPENILL     +K+ D+
Sbjct: 120 -TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDF 168

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 86/175 (49%), Gaps = 13/175 (7%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRL 145
               RY I+  +G+G+FG+V++C D   ++  A+K++      NK     + E+++L++L
Sbjct: 19  TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
              +I     +++    +  +   IV E   G  L+D + K   + F       + +Q+ 
Sbjct: 79  DHPNI-----MKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVF 131
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLSMASRV 259
             + +MH+  ++H DLKPENILL S E  K  D K+     +  FQ    M  R+
Sbjct: 132 SGITYMHKHNIVHRDLKPENILLESKE--KDCDIKIIDFGLSTCFQQNTKMKDRI 184

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 79/162 (48%), Gaps = 21/162 (12%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV----------RSINKYREAAMI 137
           EN  P+      +G G    V  C      +  A+KI+            + + REA + 
Sbjct: 4   ENYEPK----EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 59
Query: 138 EIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLV 196
           E+D+L++++ H       +Q+++ ++      +VF+ +    L+D+L +    +      
Sbjct: 60  EVDILRKVSGH----PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKET 113
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           R++ R LLE +  +H+L ++H DLKPENILL     +K+ D+
Sbjct: 114 RKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDF 155

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 80  GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA- 134
           G ++    + L   Y +   +G G  G+V   F+ +  + VAIKI+     +I   REA 
Sbjct: 4   GSHMSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREAD 63
Query: 135 ----AMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRS 190
                  EI++L++L    I     ++I+N+FD  ++  ++    G  L+D +  N  + 
Sbjct: 64  PALNVETEIEILKKLNHPCI-----IKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KR 116
Query: 191 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE---YVKVPDY 238
                 +    Q+L +V ++HE  +IH DLKPEN+LL S E    +K+ D+
Sbjct: 117 LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 167

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR---EAAMIEIDVLQRLARHD 149
           +Y  L K+GEGT+G V +  + E  E+VA+K VR  +       +A+ EI +L+ L   +
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           I     V++ +       + +VFE     L  +    +    P ++V+    QLL+ + F
Sbjct: 63  I-----VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGF 116
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDY 238
            H   ++H DLKP+N+L+     +K+ D+
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLADF 145

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Query: 64  AIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK 123
           A   +G P        G +V       + RY+    +G+G+FG+V+ C D    +  A+K
Sbjct: 21  AAGTSGGPGDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVK 80
Query: 124 IV--RSINKY--REAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEK-LGPS 178
           ++  R + +   +E+ + E+ +L++L   +I     +++  +F+ + +  +V E   G  
Sbjct: 81  VISKRQVKQKTDKESLLREVQLLKQLDHPNI-----MKLYEFFEDKGYFYLVGEVYTGGE 135
Query: 179 LYDFL--RKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS 229
           L+D +  RK   R   +D  R + RQ+L  + +MH+ +++H DLKPEN+LL S
Sbjct: 136 LFDEIISRK---RFSEVDAARII-RQVLSGITYMHKNKIVHRDLKPENLLLES 184

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 91/173 (52%), Gaps = 16/173 (9%)
Query: 64  AIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK 123
           A   +G P        G +V       + RY+    +G+G+FG+V+ C D    +  A+K
Sbjct: 22  AAGTSGGPGDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVK 81
Query: 124 IV--RSINKY--REAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEK-LGPS 178
           ++  R + +   +E+ + E+ +L++L   +I     +++  +F+ + +  +V E   G  
Sbjct: 82  VISKRQVKQKTDKESLLREVQLLKQLDHPNI-----MKLYEFFEDKGYFYLVGEVYTGGE 136
Query: 179 LYDFL--RKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS 229
           L+D +  RK   R   +D  R + RQ+L  + +MH+ +++H DLKPEN+LL S
Sbjct: 137 LFDEIISRK---RFSEVDAARII-RQVLSGITYMHKNKIVHRDLKPENLLLES 185

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 82/145 (56%), Gaps = 12/145 (8%)
Query: 90  LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKY--REAAMIEIDVLQRL 145
            + RY+    +G+G+FG+V+ C D    +  A+K++  R + +   +E+ + E+ +L++L
Sbjct: 30  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
              +I     +++  +F+ + +  +V E   G  L+D +     R   +D  R + RQ+L
Sbjct: 90  DHPNI-----MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARII-RQVL 142
Query: 205 ESVAFMHELRLIHTDLKPENILLVS 229
             + +MH+ +++H DLKPEN+LL S
Sbjct: 143 SGITYMHKNKIVHRDLKPENLLLES 167

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 20/156 (12%)
Query: 96  ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
           I+SK +G G  G+V   F+ +  + VAIKI+     +I   REA        EI++L++L
Sbjct: 13  IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 72
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
               I     ++I+N+FD  ++  ++    G  L+D +  N  +       +    Q+L 
Sbjct: 73  NHPCI-----IKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLL 125
Query: 206 SVAFMHELRLIHTDLKPENILLVSAE---YVKVPDY 238
           +V ++HE  +IH DLKPEN+LL S E    +K+ D+
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 161

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 20/156 (12%)
Query: 96  ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
           I+SK +G G  G+V   F+ +  + VAIKI+     +I   REA        EI++L++L
Sbjct: 13  IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 72
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
               I     ++I+N+FD  ++  ++    G  L+D +  N  +       +    Q+L 
Sbjct: 73  NHPCI-----IKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLL 125
Query: 206 SVAFMHELRLIHTDLKPENILLVSAE---YVKVPDY 238
           +V ++HE  +IH DLKPEN+LL S E    +K+ D+
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 161

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 20/156 (12%)
Query: 96  ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
           I+SK +G G  G+V   F+ +  + VAIKI+     +I   REA        EI++L++L
Sbjct: 13  IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 72
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
               I     ++I+N+FD  ++  ++    G  L+D +  N  +       +    Q+L 
Sbjct: 73  NHPCI-----IKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLL 125
Query: 206 SVAFMHELRLIHTDLKPENILLVSAE---YVKVPDY 238
           +V ++HE  +IH DLKPEN+LL S E    +K+ D+
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 161

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 20/156 (12%)
Query: 96  ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
           I+SK +G G  G+V   F+ +  + VAIKI+     +I   REA        EI++L++L
Sbjct: 12  IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 71
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
               I     ++I+N+FD  ++  ++    G  L+D +  N  +       +    Q+L 
Sbjct: 72  NHPCI-----IKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLL 124
Query: 206 SVAFMHELRLIHTDLKPENILLVSAE---YVKVPDY 238
           +V ++HE  +IH DLKPEN+LL S E    +K+ D+
Sbjct: 125 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 160

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 82/145 (56%), Gaps = 12/145 (8%)
Query: 90  LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKY--REAAMIEIDVLQRL 145
            + RY+    +G+G+FG+V+ C D    +  A+K++  R + +   +E+ + E+ +L++L
Sbjct: 24  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
              +I     +++  +F+ + +  +V E   G  L+D +     R   +D  R + RQ+L
Sbjct: 84  DHPNI-----MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARII-RQVL 136
Query: 205 ESVAFMHELRLIHTDLKPENILLVS 229
             + +MH+ +++H DLKPEN+LL S
Sbjct: 137 SGITYMHKNKIVHRDLKPENLLLES 161

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 20/156 (12%)
Query: 96  ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
           I+SK +G G  G+V   F+ +  + VAI+I+     +I   REA        EI++L++L
Sbjct: 152 IMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL 211
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
               I     ++I+N+FD  ++  ++    G  L+D +  N  +       +    Q+L 
Sbjct: 212 NHPCI-----IKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLL 264
Query: 206 SVAFMHELRLIHTDLKPENILLVSAE---YVKVPDY 238
           +V ++HE  +IH DLKPEN+LL S E    +K+ D+
Sbjct: 265 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 300

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 82/156 (52%), Gaps = 20/156 (12%)
Query: 96  ILSK-MGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREA-----AMIEIDVLQRL 145
           I+SK +G G  G+V   F+ +  + VAI+I+     +I   REA        EI++L++L
Sbjct: 138 IMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL 197
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
               I     ++I+N+FD  ++  ++    G  L+D +  N  +       +    Q+L 
Sbjct: 198 NHPCI-----IKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLL 250
Query: 206 SVAFMHELRLIHTDLKPENILLVSAE---YVKVPDY 238
           +V ++HE  +IH DLKPEN+LL S E    +K+ D+
Sbjct: 251 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 286

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR---EAAMIEIDVLQRLARHD 149
           +Y  L K+GEGT+G V +  + E  E+VA+K VR  +       +A+ EI +L+ L   +
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           I     V++ +       + +VFE     L  +    +    P ++V+    QLL+ + F
Sbjct: 63  I-----VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGF 116
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDY 238
            H   ++H DLKP+N+L+     +K+ ++
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANF 145

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 89/170 (52%), Gaps = 14/170 (8%)
Query: 80  GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMI 137
           G ++ +   +L+  Y+ + K+G G +G+V+ C D       AIKI+R  S++    + ++
Sbjct: 25  GMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLL 84
Query: 138 EIDVLQRLARHDIGGTRCVQIRNWF-DYRNHICIVFEKLGPSLYD-FLRKNSYRSFPIDL 195
           E   + +L  H       +++ ++F D RN+  ++    G  L+D  + +  +      +
Sbjct: 85  EEVAVLKLLDH----PNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV 140
Query: 196 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE---YVKVPDYKVPS 242
           +    +Q+L  V ++H+  ++H DLKPEN+LL S E    +K+ D+ + +
Sbjct: 141 II---KQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSA 187

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 28/176 (15%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHD 149
           +Y  L  +GEG++G V++C + +   +VAIK     +     ++ AM EI +L++L   +
Sbjct: 26  KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHEN 85
Query: 150 IGGTR--CVQIRNW---FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
           +      C + + W   F++ +H  +   +L P+  D+            +V++   Q++
Sbjct: 86  LVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDY-----------QVVQKYLFQII 134
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLSMASRVY 260
             + F H   +IH D+KPENIL+  +  VK+ D         F F   L+    VY
Sbjct: 135 NGIGFCHSHNIIHRDIKPENILVSQSGVVKLCD---------FGFARTLAAPGEVY 181

>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++R+  K+G G+FG++    + +  E VAIK+     K+ +  + E  + + L     GG
Sbjct: 8   KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQL-LYESKIYRILQ----GG 62
Query: 153 TRCVQIRNWFDYR-NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
           T    +R WF    ++  +V + LGPSL D     S R   +  V  L  Q++  V F+H
Sbjct: 63  TGIPNVR-WFGVEGDYNVLVMDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVH 120
Query: 212 ELRLIHTDLKPENILL 227
               +H D+KP+N L+
Sbjct: 121 SKSFLHRDIKPDNFLM 136

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 25/194 (12%)
Query: 48  GNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPR--YRILSKMGEGTF 105
           GN G+    C  +   ++P   S P +P +KD   +        PR   ++  K+G G F
Sbjct: 151 GNDGL----CQKL---SVPCMSSKPQKPWEKDAWEI--------PRESLKLEKKLGAGQF 195
Query: 106 GQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165
           G+V     N K   VA+K ++  +   EA + E +V++ L +HD    + V++      +
Sbjct: 196 GEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHD----KLVKLHAVVT-K 248
Query: 166 NHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPEN 224
             I I+ E +   SL DFL+ +     P+  + +   Q+ E +AF+ +   IH DL+  N
Sbjct: 249 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAAN 308
Query: 225 ILLVSAEYVKVPDY 238
           IL+ ++   K+ D+
Sbjct: 309 ILVSASLVCKIADF 322

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 25/194 (12%)
Query: 48  GNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPR--YRILSKMGEGTF 105
           GN G+    C  +   ++P   S P +P +KD   +        PR   ++  K+G G F
Sbjct: 157 GNDGL----CQKL---SVPCMSSKPQKPWEKDAWEI--------PRESLKLEKKLGAGQF 201
Query: 106 GQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR 165
           G+V     N K   VA+K ++  +   EA + E +V++ L +HD    + V++      +
Sbjct: 202 GEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHD----KLVKLHAVVT-K 254
Query: 166 NHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPEN 224
             I I+ E +   SL DFL+ +     P+  + +   Q+ E +AF+ +   IH DL+  N
Sbjct: 255 EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAAN 314
Query: 225 ILLVSAEYVKVPDY 238
           IL+ ++   K+ D+
Sbjct: 315 ILVSASLVCKIADF 328

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 84/164 (51%), Gaps = 17/164 (10%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQ 143
           + L+ RY+ + K+G G +G+V+ C D       AIKI++    +      A + E+ VL+
Sbjct: 17  QGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 144 RLARHDIGGTRCVQIRNWF-DYRNHICIVFEKLGPSLYD-FLRKNSYRSFPIDLVRELGR 201
           +L   +I     +++  +F D RN+  ++    G  L+D  + +  +      ++    +
Sbjct: 77  QLDHPNI-----MKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM---K 128
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAE---YVKVPDYKVPS 242
           Q+L    ++H+  ++H DLKPEN+LL S      +K+ D+ + +
Sbjct: 129 QVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSA 172

>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d Length = 296

Iteration: 1
 Score = 57.4 bits (137), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           RYR+  K+G G+FG +    D    E VAIK+     K+ +     + +  ++ +   GG
Sbjct: 10  RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQ-----LHIESKIYKMMQGG 64
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
                IR      ++  +V E LGPSL D     S R F +  V  L  Q++  + ++H 
Sbjct: 65  VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHS 123
Query: 213 LRLIHTDLKPENILL 227
              IH D+KP+N L+
Sbjct: 124 KNFIHRDVKPDNFLM 138

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 5/152 (3%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLA 146
           N++  +++ S +GEG +G V         E+VAIK +   +K  +    + EI +L+   
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
             +I     +Q  + F+  N + I+ E +   L+   R  S +    D ++    Q L +
Sbjct: 68  HENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIYQTLRA 124
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           V  +H   +IH DLKP N+L+ S   +KV D+
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDF 156

>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing Residues 1-317 Complex With Bound Tungstate Length = 317

Iteration: 1
 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           RYR+  K+G G+FG +    D    E VAIK+     K+ +     + +  ++ +   GG
Sbjct: 8   RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQ-----LHIESKIYKMMQGG 62
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
                IR      ++  +V E LGPSL D     S R F +  V  L  Q++  + ++H 
Sbjct: 63  VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHS 121
Query: 213 LRLIHTDLKPENILL 227
              IH D+KP+N L+
Sbjct: 122 KNFIHRDVKPDNFLM 136

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 57.0 bits (136), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 5/152 (3%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLA 146
           N++  +++ S +GEG +G V         E+VAIK +   +K  +    + EI +L+   
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
             +I     +Q  + F+  N + I+ E +   L+   R  S +    D ++    Q L +
Sbjct: 68  HENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIYQTLRA 124
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           V  +H   +IH DLKP N+L+ S   +KV D+
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDF 156

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 5/152 (3%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLA 146
           N++  +++ S +GEG +G V         E+VAIK +   +K  +    + EI +L+   
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
             +I     +Q  + F+  N + I+ E +   L+   R  S +    D ++    Q L +
Sbjct: 68  HENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIYQTLRA 124
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           V  +H   +IH DLKP N+L+ S   +KV D+
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDF 156

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 83/163 (50%), Gaps = 17/163 (10%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQR 144
            L+ RY+ + K+G G +G+V+ C D       AIKI++    +      A + E+ VL++
Sbjct: 1   GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 60
Query: 145 LARHDIGGTRCVQIRNWF-DYRNHICIVFEKLGPSLYD-FLRKNSYRSFPIDLVRELGRQ 202
           L   +I     +++  +F D RN+  ++    G  L+D  + +  +      ++    +Q
Sbjct: 61  LDHPNI-----MKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM---KQ 112
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAE---YVKVPDYKVPS 242
           +L    ++H+  ++H DLKPEN+LL S      +K+ D+ + +
Sbjct: 113 VLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSA 155

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 33/212 (15%)
Query: 46  EFGNGGMPNYACSSMFYGAIPRTGS--PPWRPDDKDGHYVFAIGENLTPRYRILSKMGEG 103
           + G   +   + SS+   A P T S  P +  D  +        + L+  + + S++G G
Sbjct: 12  DLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNR-------DALSDFFEVESELGRG 64
Query: 104 TFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD 163
               V  C     ++  A+K+++     ++    EI VL RL+  +I     ++++  F+
Sbjct: 65  ATSIVYRCKQKGTQKPYALKVLKKTVD-KKIVRTEIGVLLRLSHPNI-----IKLKEIFE 118
Query: 164 YRNHICIVFEKL-GPSLYDFLRKNSYRSF--PIDLVRELGRQLLESVAFMHELRLIHTDL 220
               I +V E + G  L+D + +  Y S     D V+    Q+LE+VA++HE  ++H DL
Sbjct: 119 TPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK----QILEAVAYLHENGIVHRDL 174
Query: 221 KPENILLVSAEYVKVPDYKVPSPRHAFSFQTF 252
           KPEN+L           Y  P+P        F
Sbjct: 175 KPENLL-----------YATPAPDAPLKIADF 195

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 9/178 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH-DIGG 152
           + ++  +G GT+GQV +    +  +L AIK++       E    EI++L++ + H +I  
Sbjct: 26  FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 153 TRCVQIR-NWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                I+ N     + + +V E  G  S+ D ++     +   + +  + R++L  ++ +
Sbjct: 86  YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 145
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKVPSP--RHAFSFQTFLS----MASRVYIC 262
           H+ ++IH D+K +N+LL     VK+ D+ V +   R      TF+     MA  V  C
Sbjct: 146 HQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIAC 203

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 12/155 (7%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQ 143
           + L  +Y+ L K+GEGT+G V +  D++ + +VA+K +R ++   E     A+ EI +L+
Sbjct: 17  QGLMEKYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIR-LDAEDEGIPSTAIREISLLK 74
Query: 144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQL 203
            L   +I     V + +       + +VFE +   L   L +N         ++    QL
Sbjct: 75  ELHHPNI-----VSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQL 128
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           L  VA  H+ R++H DLKP+N+L+ S   +K+ D+
Sbjct: 129 LRGVAHCHQHRILHRDLKPQNLLINSDGALKLADF 163

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 12/155 (7%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQ 143
           + L  +Y+ L K+GEGT+G V +  D++ + +VA+K +R ++   E     A+ EI +L+
Sbjct: 17  QGLMEKYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIR-LDAEDEGIPSTAIREISLLK 74
Query: 144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQL 203
            L   +I     V + +       + +VFE +   L   L +N         ++    QL
Sbjct: 75  ELHHPNI-----VSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQL 128
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           L  VA  H+ R++H DLKP+N+L+ S   +K+ D+
Sbjct: 129 LRGVAHCHQHRILHRDLKPQNLLINSDGALKLADF 163

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 14/155 (9%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDI 150
           Y IL ++G G FG V  C +     +   K + +   ++KY      EI ++ +L     
Sbjct: 53  YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY--TVKNEISIMNQLHH--- 107
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
              + + + + F+ +  + ++ E L G  L+D +    Y+    +++  + RQ  E +  
Sbjct: 108 --PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYM-RQACEGLKH 164
Query: 210 MHELRLIHTDLKPENILLVS--AEYVKVPDYKVPS 242
           MHE  ++H D+KPENI+  +  A  VK+ D+ + +
Sbjct: 165 MHEHSIVHLDIKPENIMCETKKASSVKIIDFGLAT 199

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 23/165 (13%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-------NKYREAAMIEID 140
           E++   Y +  ++G G F  V +C      +  A K ++            RE    E++
Sbjct: 8   EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 67
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ + RH       + + + F+ +  + ++ E + G  L+DFL +    S   D   + 
Sbjct: 68  ILREI-RH----PNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQF 120
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR 244
            +Q+L+ V ++H  R+ H DLKPENI+L+        D  VP+PR
Sbjct: 121 LKQILDGVHYLHSKRIAHFDLKPENIMLL--------DKNVPNPR 157

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 82/147 (55%), Gaps = 16/147 (10%)
Query: 90  LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKY--REAAMIEIDVLQRL 145
            + RY+    +G+G+FG+V+ C D    +  A+K++  R + +   +E+ + E+ +L++L
Sbjct: 24  FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEK-LGPSLYDFL--RKNSYRSFPIDLVRELGRQ 202
              +I      ++  +F+ + +  +V E   G  L+D +  RK   R   +D  R + RQ
Sbjct: 84  DHPNI-----XKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK---RFSEVDAARII-RQ 134
Query: 203 LLESVAFMHELRLIHTDLKPENILLVS 229
           +L  + + H+ +++H DLKPEN+LL S
Sbjct: 135 VLSGITYXHKNKIVHRDLKPENLLLES 161

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 22/155 (14%)
Query: 93  RYRILSKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI 150
           +Y  L K+GEGT+G V +  +N  E   L  I++ +         + EI +L+ L   +I
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFL-------RKNSYRSFPIDLVRELGRQL 203
                V++ +    +  + +VFE L   L   L          + +SF +        QL
Sbjct: 63  -----VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL--------QL 109
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           L  +A+ H+ R++H DLKP+N+L+     +K+ D+
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADF 144

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 22/155 (14%)
Query: 93  RYRILSKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI 150
           +Y  L K+GEGT+G V +  +N  E   L  I++ +         + EI +L+ L   +I
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFL-------RKNSYRSFPIDLVRELGRQL 203
                V++ +    +  + +VFE L   L   L          + +SF +        QL
Sbjct: 63  -----VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL--------QL 109
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           L  +A+ H+ R++H DLKP+N+L+     +K+ D+
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADF 144

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 22/155 (14%)
Query: 93  RYRILSKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI 150
           +Y  L K+GEGT+G V +  +N  E   L  I++ +         + EI +L+ L   +I
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFL-------RKNSYRSFPIDLVRELGRQL 203
                V++ +    +  + +VFE L   L   L          + +SF +        QL
Sbjct: 63  -----VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL--------QL 109
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           L  +A+ H+ R++H DLKP+N+L+     +K+ D+
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADF 144

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 69  GSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--R 126
            S  W+   +D   +F   E L          G G F +VV   +    +L A+K +  +
Sbjct: 9   SSSSWKKQAEDIKKIFEFKETL----------GTGAFSEVVLAEEKATGKLFAVKCIPKK 58
Query: 127 SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRK 185
           ++     +   EI VL+++   +I     V + + ++  NH+ +V + + G  L+D + +
Sbjct: 59  ALKGKESSIENEIAVLRKIKHENI-----VALEDIYESPNHLYLVMQLVSGGELFDRIVE 113
Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE 231
             +  +       L RQ+L++V ++H + ++H DLKPEN+L  S +
Sbjct: 114 KGF--YTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQD 157

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 79/149 (53%), Gaps = 16/149 (10%)
Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMI-EIDVLQR 144
            E++   Y     +G G F +V+   D   ++LVAIK I +   + +E +M  EI VL +
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHK 72
Query: 145 LARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGR-- 201
           +   +I     V + + ++   H+ ++ + + G  L+D + +  + +      R+  R  
Sbjct: 73  IKHPNI-----VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-----ERDASRLI 122
Query: 202 -QLLESVAFMHELRLIHTDLKPENILLVS 229
            Q+L++V ++H+L ++H DLKPEN+L  S
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYS 151

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 87/177 (49%), Gaps = 14/177 (7%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVLQRLARHDIGG 152
           + I+ ++G+G FG+V +  + E   L A K++ + ++   E  ++EI++L       I  
Sbjct: 13  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI-- 70
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
              V++   + +   + I+ E       D +     R      ++ + RQ+LE++ F+H 
Sbjct: 71  ---VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 127
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQ---TFLS----MASRVYIC 262
            R+IH DLK  N+L+     +++ D+ V S ++  + Q   +F+     MA  V +C
Sbjct: 128 KRIIHRDLKAGNVLMTLEGDIRLADFGV-SAKNLKTLQKRDSFIGTPYWMAPEVVMC 183

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 79/149 (53%), Gaps = 16/149 (10%)
Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMI-EIDVLQR 144
            E++   Y     +G G F +V+   D   ++LVAIK I +   + +E +M  EI VL +
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 145 LARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGR-- 201
           +   +I     V + + ++   H+ ++ + + G  L+D + +  + +      R+  R  
Sbjct: 73  IKHPNI-----VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-----ERDASRLI 122
Query: 202 -QLLESVAFMHELRLIHTDLKPENILLVS 229
            Q+L++V ++H+L ++H DLKPEN+L  S
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYS 151

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 9/155 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDIG 151
           Y +   +G+G F  V  C + E  +  A+KIV  + K+  +  +  + L+R A   H + 
Sbjct: 26  YELCEVIGKGAFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDF---LRKNSYRSFPIDLVRELGRQLLESVA 208
               V++   +     + +VFE +  +   F    R ++   +   +     RQ+LE++ 
Sbjct: 85  HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 209 FMHELRLIHTDLKPENILLVSAEY---VKVPDYKV 240
           + H+  +IH D+KPEN+LL S E    VK+ D+ V
Sbjct: 145 YCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGV 179

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 79/149 (53%), Gaps = 16/149 (10%)
Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMI-EIDVLQR 144
            E++   Y     +G G F +V+   D   ++LVAIK I +   + +E +M  EI VL +
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 145 LARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGR-- 201
           +   +I     V + + ++   H+ ++ + + G  L+D + +  + +      R+  R  
Sbjct: 73  IKHPNI-----VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-----ERDASRLI 122
Query: 202 -QLLESVAFMHELRLIHTDLKPENILLVS 229
            Q+L++V ++H+L ++H DLKPEN+L  S
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYS 151

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 87/177 (49%), Gaps = 14/177 (7%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-EAAMIEIDVLQRLARHDIGG 152
           + I+ ++G+G FG+V +  + E   L A K++ + ++   E  ++EI++L       I  
Sbjct: 21  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI-- 78
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
              V++   + +   + I+ E       D +     R      ++ + RQ+LE++ F+H 
Sbjct: 79  ---VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 135
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQ---TFLS----MASRVYIC 262
            R+IH DLK  N+L+     +++ D+ V S ++  + Q   +F+     MA  V +C
Sbjct: 136 KRIIHRDLKAGNVLMTLEGDIRLADFGV-SAKNLKTLQKRDSFIGTPYWMAPEVVMC 191

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 79/149 (53%), Gaps = 16/149 (10%)
Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMI-EIDVLQR 144
            E++   Y     +G G F +V+   D   ++LVAIK I +   + +E +M  EI VL +
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 145 LARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGR-- 201
           +   +I     V + + ++   H+ ++ + + G  L+D + +  + +      R+  R  
Sbjct: 73  IKHPNI-----VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-----ERDASRLI 122
Query: 202 -QLLESVAFMHELRLIHTDLKPENILLVS 229
            Q+L++V ++H+L ++H DLKPEN+L  S
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYS 151

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 11/147 (7%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIGGTR 154
           L ++G+G+FG+V +  DN  +++VAIKI+         E    EI VL +        + 
Sbjct: 28  LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQ-----CDSSY 82
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             +    +   + + I+ E L G S  D LR   +  F I     + +++L+ + ++H  
Sbjct: 83  VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQI---ATMLKEILKGLDYLHSE 139
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKV 240
           + IH D+K  N+LL     VK+ D+ V
Sbjct: 140 KKIHRDIKAANVLLSEQGDVKLADFGV 166

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 23/159 (14%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-------NKYREAAMIEIDVLQRLA 146
           Y +  ++G G F  V +C      +  A K ++            RE    E+++L+ + 
Sbjct: 28  YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREI- 86
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           RH       + + + F+ +  + ++ E + G  L+DFL +    S   D   +  +Q+L+
Sbjct: 87  RH----PNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILD 140
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR 244
            V ++H  R+ H DLKPENI+L+        D  VP+PR
Sbjct: 141 GVHYLHSKRIAHFDLKPENIMLL--------DKNVPNPR 171

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 23/159 (14%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-------NKYREAAMIEIDVLQRLA 146
           Y +  ++G G F  V +C      +  A K ++            RE    E+++L+ + 
Sbjct: 7   YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
             +I     + + + F+ +  + ++ E + G  L+DFL +    S   D   +  +Q+L+
Sbjct: 67  HPNI-----ITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILD 119
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR 244
            V ++H  R+ H DLKPENI+L+        D  VP+PR
Sbjct: 120 GVHYLHSKRIAHFDLKPENIMLL--------DKNVPNPR 150

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 12/151 (7%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMI--EIDVLQRLARHD 149
           +Y ++ K+G+G +G V +  D    E+VA+K I  +     +A     EI +L  L+ H+
Sbjct: 10  KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 150 IGGTRCVQIRNWF--DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
                 V + N    D    + +VF+ +   L+  +R N         V     QL++ +
Sbjct: 70  ----NIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYV---VYQLIKVI 122
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            ++H   L+H D+KP NILL +  +VKV D+
Sbjct: 123 KYLHSGGLLHRDMKPSNILLNAECHVKVADF 153

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+   Y    ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR 244
            +Q+L  V ++H L++ H DLKPENI+L+        D  VP PR
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLL--------DRNVPKPR 156

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+   Y    ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR 244
            +Q+L  V ++H L++ H DLKPENI+L+        D  VP PR
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLL--------DRNVPKPR 156

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 75/148 (50%), Gaps = 8/148 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           + +L K+GEG++G V +    E  ++VAIK V   +  +E  + EI ++Q+         
Sbjct: 31  FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEI-IKEISIMQQC-----DSP 84
Query: 154 RCVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
             V+    +     + IV E  G  S+ D +R  + ++   D +  + +  L+ + ++H 
Sbjct: 85  HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHF 143
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKV 240
           +R IH D+K  NILL +  + K+ D+ V
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGV 171

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+   Y    ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 66  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 118
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR 244
            +Q+L  V ++H L++ H DLKPENI+L+        D  VP PR
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIMLL--------DRNVPKPR 155

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+   Y    ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 66  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 118
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR 244
            +Q+L  V ++H L++ H DLKPENI+L+        D  VP PR
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIMLL--------DRNVPKPR 155

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+   Y    ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR 244
            +Q+L  V ++H L++ H DLKPENI+L+        D  VP PR
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLL--------DRNVPKPR 156

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 17/150 (11%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIG--- 151
           L ++G+G+FG+V +  DN  KE+VAIKI+         E    EI VL +     I    
Sbjct: 24  LDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYF 83
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           G+     + W        I+ E L G S  D L+        I  +    R++L+ + ++
Sbjct: 84  GSYLKSTKLW--------IIMEYLGGGSALDLLKPGPLEETYIATIL---REILKGLDYL 132
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           H  R IH D+K  N+LL     VK+ D+ V
Sbjct: 133 HSERKIHRDIKAANVLLSEQGDVKLADFGV 162

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+   Y    ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR 244
            +Q+L  V ++H L++ H DLKPENI+L+        D  VP PR
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLL--------DRNVPKPR 156

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+   Y    ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR 244
            +Q+L  V ++H L++ H DLKPENI+L+        D  VP PR
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLL--------DRNVPKPR 156

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+   Y    ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR 244
            +Q+L  V ++H L++ H DLKPENI+L+        D  VP PR
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLL--------DRNVPKPR 156

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+   Y    ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR 244
            +Q+L  V ++H L++ H DLKPENI+L+        D  VP PR
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLL--------DRNVPKPR 156

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 14/157 (8%)
Query: 91  TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA---------AMIEIDV 141
           + +Y  +S +G G FG V    D EK + V +K ++      +            +EI +
Sbjct: 23  SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 142 LQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGR 201
           L R+   +I     +++ + F+ +    +V EK G  L  F   + +      L   + R
Sbjct: 83  LSRVEHANI-----IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFR 137
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           QL+ +V ++    +IH D+K ENI++     +K+ D+
Sbjct: 138 QLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDF 174

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+   Y    ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR 244
            +Q+L  V ++H L++ H DLKPENI+L+        D  VP PR
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLL--------DRNVPKPR 156

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+   Y    ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR 244
            +Q+L  V ++H L++ H DLKPENI+L+        D  VP PR
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLL--------DRNVPKPR 156

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+   Y    ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR 244
            +Q+L  V ++H L++ H DLKPENI+L+        D  VP PR
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLL--------DRNVPKPR 156

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+   Y    ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR 244
            +Q+L  V ++H L++ H DLKPENI+L+        D  VP PR
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLL--------DRNVPKPR 156

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 75/146 (51%), Gaps = 11/146 (7%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLAR 147
           N+   +  +  +G G F +V         +L A+K ++    +R++++  EI VL+++  
Sbjct: 6   NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH 65
Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYD-FLRKNSYRSFPIDLVRELGRQLLE 205
            +I     V + + ++   H  +V + + G  L+D  L +  Y      LV +   Q+L 
Sbjct: 66  ENI-----VTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQ---QVLS 117
Query: 206 SVAFMHELRLIHTDLKPENILLVSAE 231
           +V ++HE  ++H DLKPEN+L ++ E
Sbjct: 118 AVKYLHENGIVHRDLKPENLLYLTPE 143

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 78/161 (48%), Gaps = 14/161 (8%)
Query: 86  IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL 145
           IG+ +  RY+I+ K+G G    V    D      VAIK +    + +E      + L+R 
Sbjct: 5   IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKE------ETLKRF 58
Query: 146 AR--HDIGGTRCVQIRNWFDY-RNHIC--IVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
            R  H+        I +  D      C  +V E + GP+L +++   S+    +D     
Sbjct: 59  EREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE--SHGPLSVDTAINF 116
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
             Q+L+ +   H++R++H D+KP+NIL+ S + +K+ D+ +
Sbjct: 117 TNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGI 157

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 75/145 (51%), Gaps = 8/145 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++  K+G G FG+V     N K   VA+K ++  +   EA + E +V++ L +HD    +
Sbjct: 18  KLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHD----K 71
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V++      +  I I+ E +   SL DFL+ +     P+  + +   Q+ E +AF+ + 
Sbjct: 72  LVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 130
Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             IH DL+  NIL+ ++   K+ D+
Sbjct: 131 NYIHRDLRAANILVSASLVCKIADF 155

>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567 Length = 296

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 6/135 (4%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           +YR+  K+G G+FG +    +    E VAIK+     K+ +     + +  +  +   GG
Sbjct: 10  KYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQ-----LHIESKFYKMMQGG 64
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
                I+      ++  +V E LGPSL D     S R F +  V  L  Q++  + ++H 
Sbjct: 65  VGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHS 123
Query: 213 LRLIHTDLKPENILL 227
              IH D+KP+N L+
Sbjct: 124 KNFIHRDVKPDNFLM 138

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 27/200 (13%)
Query: 49  NGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQV 108
           N   P    +  F    P    P W           A  +    +Y     +G G    V
Sbjct: 62  NDAQPKGTENLYFQSMGPEDELPDW-----------AAAKEFYQKYDPKDVIGRGVSSVV 110
Query: 109 VECFDNEKKELVAIKIVR---------SINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
             C         A+KI+           + + REA   E  +L+++A H       + + 
Sbjct: 111 RRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH----PHIITLI 166
Query: 160 NWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHT 218
           + ++  + + +VF+ +    L+D+L +    +      R + R LLE+V+F+H   ++H 
Sbjct: 167 DSYESSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFLHANNIVHR 224
Query: 219 DLKPENILLVSAEYVKVPDY 238
           DLKPENILL     +++ D+
Sbjct: 225 DLKPENILLDDNMQIRLSDF 244

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 23/165 (13%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEID 140
           EN+   Y    ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILIGELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR 244
            +Q+L  V ++H L++ H DLKPENI+L+        D  VP PR
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLL--------DRNVPKPR 156

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 11/159 (6%)
Query: 84  FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMI---EI 139
            AI +     Y I   +GEG+FG+V      + ++ VA+K I R + K  +  M    EI
Sbjct: 1   MAISKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREI 60
Query: 140 DVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
             L +L RH       +++ +       I +V E  G  L+D++ +   +    D  R  
Sbjct: 61  SYL-KLLRH----PHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEK--KRMTEDEGRRF 113
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            +Q++ ++ + H  +++H DLKPEN+LL     VK+ D+
Sbjct: 114 FQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADF 152

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 19/157 (12%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLA 146
           Y I  ++G G F  V +C +       A K ++            RE    E+ +L+++ 
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
            H++     + + + ++ R  + ++ E + G  L+DFL +    S   +      +Q+L+
Sbjct: 74  HHNV-----ITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILD 126
Query: 206 SVAFMHELRLIHTDLKPENILLVSAE----YVKVPDY 238
            V ++H  ++ H DLKPENI+L+       ++K+ D+
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDF 163

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 19/157 (12%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLA 146
           Y I  ++G G F  V +C +       A K ++            RE    E+ +L+++ 
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
            H++     + + + ++ R  + ++ E + G  L+DFL +    S   +      +Q+L+
Sbjct: 74  HHNV-----ITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILD 126
Query: 206 SVAFMHELRLIHTDLKPENILLVSAE----YVKVPDY 238
            V ++H  ++ H DLKPENI+L+       ++K+ D+
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDF 163

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 19/157 (12%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLA 146
           Y I  ++G G F  V +C +       A K ++            RE    E+ +L+++ 
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
            H++     + + + ++ R  + ++ E + G  L+DFL +    S   +      +Q+L+
Sbjct: 74  HHNV-----ITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILD 126
Query: 206 SVAFMHELRLIHTDLKPENILLVSAE----YVKVPDY 238
            V ++H  ++ H DLKPENI+L+       ++K+ D+
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDF 163

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 19/157 (12%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLA 146
           Y I  ++G G F  V +C +       A K ++            RE    E+ +L+++ 
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
            H++     + + + ++ R  + ++ E + G  L+DFL +    S   +      +Q+L+
Sbjct: 74  HHNV-----ITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILD 126
Query: 206 SVAFMHELRLIHTDLKPENILLVSAE----YVKVPDY 238
            V ++H  ++ H DLKPENI+L+       ++K+ D+
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDF 163

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 19/157 (12%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLA 146
           Y I  ++G G F  V +C +       A K ++            RE    E+ +L+++ 
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
            H++     + + + ++ R  + ++ E + G  L+DFL +    S   +      +Q+L+
Sbjct: 74  HHNV-----ITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILD 126
Query: 206 SVAFMHELRLIHTDLKPENILLVSAE----YVKVPDY 238
            V ++H  ++ H DLKPENI+L+       ++K+ D+
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDF 163

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 23/158 (14%)
Query: 84  FAIGENLTPRYRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVL 142
           F   EN    Y + SK +G G F  V +C      +  A K ++   K R       ++L
Sbjct: 20  FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLK---KRRRGQDCRAEIL 76
Query: 143 QRLARHDIGGT--RCVQIRNWFDYRNHICIVFEKLG---------PSLYDFLRKNSYRSF 191
             +A  ++  +  R + +   ++  + I ++ E            P L + + +N     
Sbjct: 77  HEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSEN----- 131
Query: 192 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS 229
             D++R L +Q+LE V ++H+  ++H DLKP+NILL S
Sbjct: 132 --DVIR-LIKQILEGVYYLHQNNIVHLDLKPQNILLSS 166

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA-----MIEIDVLQRLARH 148
           ++ LS++G G++G+V +    E   L A+K  RS++ +R        + E+   +++ +H
Sbjct: 59  FQRLSRLGHGSYGEVFKVRSKEDGRLYAVK--RSMSPFRGPKDRARKLAEVGSHEKVGQH 116
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                 CV++   ++    + +  E  GPSL          S P   V    R  L ++A
Sbjct: 117 PC----CVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGA-SLPEAQVWGYLRDTLLALA 171
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
            +H   L+H D+KP NI L      K+ D+ +
Sbjct: 172 HLHSQGLVHLDVKPANIFLGPRGRCKLGDFGL 203

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 10/149 (6%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           RY ++  +G G FG      D +  ELVA+K +    K  E    EI +  R  RH    
Sbjct: 20  RYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREI-INHRSLRH---- 74
Query: 153 TRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V+ +       H+ IV E   G  L++  R  +   F  D  R   +QL+  V++ H
Sbjct: 75  PNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYAH 132
Query: 212 ELRLIHTDLKPENILL--VSAEYVKVPDY 238
            +++ H DLK EN LL    A  +K+ D+
Sbjct: 133 AMQVAHRDLKLENTLLDGSPAPRLKIADF 161

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 18/162 (11%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           ++ +G+G FGQVV+  +       AIK +R   +     + E+ +L  L    +      
Sbjct: 11  IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 157 QIRNWFDYRNHI---------CIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQL 203
               W + RN +           +F ++      +LYD +   +      +  R L RQ+
Sbjct: 71  ----WLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR-LFRQI 125
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH 245
           LE+++++H   +IH DLKP NI +  +  VK+ D+ +    H
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVH 167

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 80/156 (51%), Gaps = 18/156 (11%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
           Y IL ++G G   +V +   NEKK++ AIK V       ++++ YR     EI  L +L 
Sbjct: 58  YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 112
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           +H     + +++ ++     +I +V E     L  +L+K   +S      +   + +LE+
Sbjct: 113 QH---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEA 167
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           V  +H+  ++H+DLKP N L+V    +K+ D+ + +
Sbjct: 168 VHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIAN 202

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 79/154 (51%), Gaps = 18/154 (11%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
           Y IL ++G G   +V +   NEKK++ AIK V       ++++ YR     EI  L +L 
Sbjct: 58  YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 112
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           +H     + +++ ++     +I +V E     L  +L+K   +S      +   + +LE+
Sbjct: 113 QH---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEA 167
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           V  +H+  ++H+DLKP N L+V    +K+ D+ +
Sbjct: 168 VHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGI 200

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 8/136 (5%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           RY ++  +G G FG      D +  ELVA+K +    K  E    EI +  R  RH    
Sbjct: 20  RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLRH---- 74
Query: 153 TRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V+ +       H+ IV E   G  L++  R  +   F  D  R   +QL+  V++ H
Sbjct: 75  PNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 212 ELRLIHTDLKPENILL 227
            +++ H DLK EN LL
Sbjct: 133 AMQVCHRDLKLENTLL 148

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 8/136 (5%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           RY ++  +G G FG      D +  ELVA+K +    K  E    EI +  R  RH    
Sbjct: 20  RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLRH---- 74
Query: 153 TRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V+ +       H+ IV E   G  L++  R  +   F  D  R   +QL+  V++ H
Sbjct: 75  PNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 212 ELRLIHTDLKPENILL 227
            +++ H DLK EN LL
Sbjct: 133 AMQVCHRDLKLENTLL 148

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 79/154 (51%), Gaps = 18/154 (11%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
           Y IL ++G G   +V +   NEKK++ AIK V       ++++ YR     EI  L +L 
Sbjct: 58  YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 112
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           +H     + +++ ++     +I +V E     L  +L+K   +S      +   + +LE+
Sbjct: 113 QH---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEA 167
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           V  +H+  ++H+DLKP N L+V    +K+ D+ +
Sbjct: 168 VHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGI 200

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 69/150 (46%), Gaps = 7/150 (4%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAI-KIVRSINKYREAAMI--EIDVLQRLARHD 149
           RY I   +G G++G V E +D  +K +VAI KI+R      +   I  EI +L RL    
Sbjct: 54  RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDH 113
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDL-VRELGRQLLESVA 208
           +     + I    +  + + +V E          R   Y +   +L ++ L   LL  V 
Sbjct: 114 VVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLT---ELHIKTLLYNLLVGVK 170
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++H   ++H DLKP N L+     VKV D+
Sbjct: 171 YVHSAGILHRDLKPANCLVNQDCSVKVCDF 200

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 91  TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI 150
           + RY ++  +G G FG      D +  ELVA+K +    K  E    EI +  R  RH  
Sbjct: 17  SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-INHRSLRH-- 73
Query: 151 GGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                V+ +       H+ IV E   G  L++  R  +   F  D  R   +QL+  V++
Sbjct: 74  --PNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSY 129
Query: 210 MHELRLIHTDLKPENILL 227
            H +++ H DLK EN LL
Sbjct: 130 CHAMQVCHRDLKLENTLL 147

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 80/156 (51%), Gaps = 18/156 (11%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
           Y IL ++G G   +V +   NEKK++ AIK V       ++++ YR     EI  L +L 
Sbjct: 30  YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 84
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           +H     + +++ ++     +I +V E     L  +L+K   +S      +   + +LE+
Sbjct: 85  QH---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEA 139
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           V  +H+  ++H+DLKP N L+V    +K+ D+ + +
Sbjct: 140 VHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIAN 174

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 80/156 (51%), Gaps = 18/156 (11%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
           Y IL ++G G   +V +   NEKK++ AIK V       ++++ YR     EI  L +L 
Sbjct: 30  YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 84
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           +H     + +++ ++     +I +V E     L  +L+K   +S      +   + +LE+
Sbjct: 85  QH---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEA 139
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           V  +H+  ++H+DLKP N L+V    +K+ D+ + +
Sbjct: 140 VHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIAN 174

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 18/162 (11%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           ++ +G+G FGQVV+  +       AIK +R   +     + E+ +L  L    +      
Sbjct: 11  IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAA 70
Query: 157 QIRNWFDYRNHI---------CIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQL 203
               W + RN +           +F ++      +LYD +   +      +  R L RQ+
Sbjct: 71  ----WLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR-LFRQI 125
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH 245
           LE+++++H   +IH DLKP NI +  +  VK+ D+ +    H
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVH 167

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 80/156 (51%), Gaps = 18/156 (11%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
           Y IL ++G G   +V +   NEKK++ AIK V       ++++ YR     EI  L +L 
Sbjct: 11  YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 65
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           +H     + +++ ++     +I +V E     L  +L+K   +S      +   + +LE+
Sbjct: 66  QH---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEA 120
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           V  +H+  ++H+DLKP N L+V    +K+ D+ + +
Sbjct: 121 VHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIAN 155

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 80/156 (51%), Gaps = 18/156 (11%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
           Y IL ++G G   +V +   NEKK++ AIK V       ++++ YR     EI  L +L 
Sbjct: 14  YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 68
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           +H     + +++ ++     +I +V E     L  +L+K   +S      +   + +LE+
Sbjct: 69  QH---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEA 123
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           V  +H+  ++H+DLKP N L+V    +K+ D+ + +
Sbjct: 124 VHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIAN 158

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 9/152 (5%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK---IVRSINKYREAAMIEIDVLQRLARHD 149
           +Y  L K+GEG+FG+ +     E      IK   I R  +K RE +  E+ VL  +   +
Sbjct: 25  KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN 84
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I     VQ R  F+    + IV +   G  L+  +       F  D + +   Q+  ++ 
Sbjct: 85  I-----VQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK 139
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
            +H+ +++H D+K +NI L     V++ D+ +
Sbjct: 140 HVHDRKILHRDIKSQNIFLTKDGTVQLGDFGI 171

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 14/149 (9%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 4   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E++ P   L+DF+ +    +   +L R 
Sbjct: 64  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERG--ALQEELARS 118
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+LE+V   H   ++H D+K ENIL+
Sbjct: 119 FFWQVLEAVRHCHNCGVLHRDIKDENILI 147

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 80/156 (51%), Gaps = 18/156 (11%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMIEIDVLQRLA 146
           Y IL ++G G   +V +   NEKK++ AIK V       ++++ YR     EI  L +L 
Sbjct: 10  YSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 64
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           +H     + +++ ++     +I +V E     L  +L+K   +S      +   + +LE+
Sbjct: 65  QH---SDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEA 119
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           V  +H+  ++H+DLKP N L+V    +K+ D+ + +
Sbjct: 120 VHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIAN 154

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 11/131 (8%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA-AMIEIDVLQRLARHDIGGTRCVQI 158
           +GEG+F    +C   +  +  A+KI   I+K  EA    EI  L+    H       V++
Sbjct: 19  LGEGSFSICRKCVHKKSNQAFAVKI---ISKRMEANTQKEITALKLCEGH----PNIVKL 71
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
              F  + H  +V E L G  L++ ++K  +  F       + R+L+ +V+ MH++ ++H
Sbjct: 72  HEVFHDQLHTFLVMELLNGGELFERIKKKKH--FSETEASYIMRKLVSAVSHMHDVGVVH 129
Query: 218 TDLKPENILLV 228
            DLKPEN+L  
Sbjct: 130 RDLKPENLLFT 140

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 38/179 (21%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
           E  + +Y +   +G G+FG V E FD E  +  A+K V    +Y+     E+D+++ L  
Sbjct: 3   ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNR---ELDIMKVLDH 59
Query: 148 --------------------------HDIGGTRCVQIRNWF-------DYRNHICIVFEK 174
                                     H+  G +   + N             ++ ++ E 
Sbjct: 60  VNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEY 119
Query: 175 LGPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE 231
           +  +L+  L+    S RS P++L+     QL  +V F+H L + H D+KP+N+L+ S +
Sbjct: 120 VPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKD 178

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 50.4 bits (119), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 26  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 84
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 85  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 138
Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             IH DL+  NIL+      K+ D+
Sbjct: 139 NYIHRDLRAANILVSDTLSCKIADF 163

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 16  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 75  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             IH DL+  NIL+      K+ D+
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADF 153

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 22  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 80
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 81  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             IH DL+  NIL+      K+ D+
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADF 159

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 24  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 82
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 83  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 136
Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             IH DL+  NIL+      K+ D+
Sbjct: 137 NYIHRDLRAANILVSDTLSCKIADF 161

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 22  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 80
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 81  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             IH DL+  NIL+      K+ D+
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADF 159

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 25  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 83
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 84  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 137
Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             IH DL+  NIL+      K+ D+
Sbjct: 138 NYIHRDLRAANILVSDTLSCKIADF 162

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 16/160 (10%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G  G+V+ECF     +  A+K++    K R+    E+D   + +    GG   V I 
Sbjct: 37  LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ----EVDHHWQAS----GGPHIVCIL 88
Query: 160 NWFDYRNH----ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           + ++  +H    + I+ E + G  L+  +++   ++F      E+ R +  ++ F+H   
Sbjct: 89  DVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN 148
Query: 215 LIHTDLKPENILLVSAE---YVKVPDYKVPSPRHAFSFQT 251
           + H D+KPEN+L  S E    +K+ D+         + QT
Sbjct: 149 IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQT 188

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 21  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 79
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 80  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 133
Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             IH DL+  NIL+      K+ D+
Sbjct: 134 NYIHRDLRAANILVSDTLSCKIADF 158

>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An Atp Competitive Inhibitor, Ic261 Length = 298

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           Y++  ++GEG+FG + E  +    + VAIK      + R +   ++    R  +   G  
Sbjct: 12  YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKF-----EPRRSDAPQLRDEYRTYKLLAG-- 64
Query: 154 RCVQIRNWFDYRN---HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
            C  I N + +     H  +V + LGPSL D L     R F +  V    +Q+L  V  +
Sbjct: 65  -CTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSI 122
Query: 211 HELRLIHTDLKPENILL 227
           HE  L++ D+KP+N L+
Sbjct: 123 HEKSLVYRDIKPDNFLI 139

>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7 Length = 297

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           Y++  ++GEG+FG + E  +    + VAIK      + R +   ++    R  +   G  
Sbjct: 11  YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKF-----EPRRSDAPQLRDEYRTYKLLAG-- 63
Query: 154 RCVQIRNWFDYRN---HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
            C  I N + +     H  +V + LGPSL D L     R F +  V    +Q+L  V  +
Sbjct: 64  -CTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSI 121
Query: 211 HELRLIHTDLKPENILL 227
           HE  L++ D+KP+N L+
Sbjct: 122 HEKSLVYRDIKPDNFLI 138

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 16  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 75  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             IH DL+  NIL+      K+ D+
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADF 153

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 18  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 76
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 77  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 130
Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             IH DL+  NIL+      K+ D+
Sbjct: 131 NYIHRDLRAANILVSDTLSCKIADF 155

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 76/160 (47%), Gaps = 16/160 (10%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G  G+V+ECF     +  A+K++    K R+    E+D   + +    GG   V I 
Sbjct: 18  LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ----EVDHHWQAS----GGPHIVCIL 69
Query: 160 NWFDYRNH----ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           + ++  +H    + I+ E + G  L+  +++   ++F      E+ R +  ++ F+H   
Sbjct: 70  DVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN 129
Query: 215 LIHTDLKPENILLVSAE---YVKVPDYKVPSPRHAFSFQT 251
           + H D+KPEN+L  S E    +K+ D+         + QT
Sbjct: 130 IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQT 169

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 8/153 (5%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE--AAMIEIDVLQRLARHDIG 151
           Y  L K+GEGT+  V +        LVA+K +R  ++      A+ E+ +L+ L   +I 
Sbjct: 4   YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI- 62
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
               V + +       + +VFE L   L  +L  +      +  V+    QLL  +A+ H
Sbjct: 63  ----VTLHDIIHTEKSLTLVFEYLDKDLKQYL-DDCGNIINMHNVKLFLFQLLRGLAYCH 117
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR 244
             +++H DLKP+N+L+     +K+ D+ +   +
Sbjct: 118 RQKVLHRDLKPQNLLINERGELKLADFGLARAK 150

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 17/150 (11%)
Query: 100 MGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGG 152
           +GEG FG+V + C+D   +   E+VA+K +++    ++R     EID+L+ L   H I  
Sbjct: 39  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL--GRQLLESVAFM 210
             C +       +  + + +  LG SL D+L ++S     I L + L   +Q+ E +A++
Sbjct: 99  KGCCEDAGAASLQ--LVMEYVPLG-SLRDYLPRHS-----IGLAQLLLFAQQICEGMAYL 150
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           H    IH DL   N+LL +   VK+ D+ +
Sbjct: 151 HAQHYIHRDLAARNVLLDNDRLVKIGDFGL 180

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 16  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 75  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             IH DL+  NIL+      K+ D+
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADF 153

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 17  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 75
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 76  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 129
Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             IH DL+  NIL+      K+ D+
Sbjct: 130 NYIHRDLRAANILVSDTLSCKIADF 154

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHD 149
           +Y  L+K+G+GTFG+V +    +  + VA+K V   N+   +   A+ EI +LQ L   +
Sbjct: 19  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 150 IGGTRCVQIRNWFDY---RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           +     +       Y   +  I +VF+     L   L  N    F +  ++ + + LL  
Sbjct: 79  VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLLNG 137
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSF 249
           + ++H  +++H D+K  N+L+     +K+ D+ +     AFS 
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA---RAFSL 177

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 11  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 69
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 70  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 123
Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             IH DL+  NIL+      K+ D+
Sbjct: 124 NYIHRDLRAANILVSDTLSCKIADF 148

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHD 149
           +Y  L+K+G+GTFG+V +    +  + VA+K V   N+   +   A+ EI +LQ L   +
Sbjct: 18  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 150 IGGTRCVQIRNWFDY---RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           +     +       Y   +  I +VF+     L   L  N    F +  ++ + + LL  
Sbjct: 78  VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLLNG 136
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSF 249
           + ++H  +++H D+K  N+L+     +K+ D+ +     AFS 
Sbjct: 137 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA---RAFSL 176

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHD 149
           +Y  L+K+G+GTFG+V +    +  + VA+K V   N+   +   A+ EI +LQ L   +
Sbjct: 19  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 150 IGGTRCVQIRNWFDY---RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           +     +       Y   +  I +VF+     L   L  N    F +  ++ + + LL  
Sbjct: 79  VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLLNG 137
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSF 249
           + ++H  +++H D+K  N+L+     +K+ D+ +     AFS 
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA---RAFSL 177

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 21/152 (13%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIG--- 151
           L K+G+G+FG+V +  DN  +++VAIKI+         E    EI VL +     +    
Sbjct: 27  LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 86
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID--LVRELGRQLLESVA 208
           G+     + W        I+ E L G S  D L        P+D   +  + R++L+ + 
Sbjct: 87  GSYLKDTKLW--------IIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLD 133
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           ++H  + IH D+K  N+LL     VK+ D+ V
Sbjct: 134 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGV 165

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 60/136 (44%), Gaps = 8/136 (5%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           RY  +  +G G FG      D   KELVA+K +       E    EI +  R  RH    
Sbjct: 21  RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREI-INHRSLRH---- 75
Query: 153 TRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V+ +       H+ I+ E   G  LY+  R  +   F  D  R   +QLL  V++ H
Sbjct: 76  PNIVRFKEVILTPTHLAIIMEYASGGELYE--RICNAGRFSEDEARFFFQQLLSGVSYCH 133
Query: 212 ELRLIHTDLKPENILL 227
            +++ H DLK EN LL
Sbjct: 134 SMQICHRDLKLENTLL 149

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 21/152 (13%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIG--- 151
           L K+G+G+FG+V +  DN  +++VAIKI+         E    EI VL +     +    
Sbjct: 12  LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID--LVRELGRQLLESVA 208
           G+     + W        I+ E L G S  D L        P+D   +  + R++L+ + 
Sbjct: 72  GSYLKDTKLW--------IIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLD 118
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           ++H  + IH D+K  N+LL     VK+ D+ V
Sbjct: 119 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGV 150

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 75/141 (53%), Gaps = 12/141 (8%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
           Y++ S+ +G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++  H +
Sbjct: 33  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV 88
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
              R V +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ 
Sbjct: 89  ---RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 145
Query: 209 FMHELRLIHTDLKPENILLVS 229
           ++H + + H D+KPEN+L  S
Sbjct: 146 YLHSINIAHRDVKPENLLYTS 166

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 21/152 (13%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIG--- 151
           L K+G+G+FG+V +  DN  +++VAIKI+         E    EI VL +     +    
Sbjct: 32  LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 91
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID--LVRELGRQLLESVA 208
           G+     + W        I+ E L G S  D L        P+D   +  + R++L+ + 
Sbjct: 92  GSYLKDTKLW--------IIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLD 138
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           ++H  + IH D+K  N+LL     VK+ D+ V
Sbjct: 139 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGV 170

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 16/137 (11%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR-----EAAMIEIDVLQRLARHDIGGT 153
           K+G G FG V      E++     +++++INK R     E    EI+VL+ L   +I   
Sbjct: 29  KLGSGAFGDVHLV---EERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNI--- 82
Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID--LVRELGRQLLESVAFM 210
             ++I   F+  +++ IV E   G  L + +     R   +    V EL +Q++ ++A+ 
Sbjct: 83  --IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 211 HELRLIHTDLKPENILL 227
           H   ++H DLKPENIL 
Sbjct: 141 HSQHVVHKDLKPENILF 157

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 21/152 (13%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIG--- 151
           L K+G+G+FG+V +  DN  +++VAIKI+         E    EI VL +     +    
Sbjct: 12  LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID--LVRELGRQLLESVA 208
           G+     + W        I+ E L G S  D L        P+D   +  + R++L+ + 
Sbjct: 72  GSYLKDTKLW--------IIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLD 118
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           ++H  + IH D+K  N+LL     VK+ D+ V
Sbjct: 119 YLHSEKKIHRDIKAANVLLSEHGEVKLADFGV 150

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---YREAAMIEIDVLQRLARHD 149
           +Y  L+K+G+GTFG+V +    +  + VA+K V   N+   +   A+ EI +LQ L   +
Sbjct: 19  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 150 IGGTRCVQIRNWFDY---RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           +     +       Y   +  I +VF+     L   L  N    F +  ++ + + LL  
Sbjct: 79  VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLLNG 137
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSF 249
           + ++H  +++H D+K  N+L+     +K+ D+ +     AFS 
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA---RAFSL 177

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 20  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 80  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 134
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+LE+V   H   ++H D+K ENIL+
Sbjct: 135 FFWQVLEAVRHCHNCGVLHRDIKDENILI 163

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 19  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 79  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 133
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+LE+V   H   ++H D+K ENIL+
Sbjct: 134 FFWQVLEAVRHCHNCGVLHRDIKDENILI 162

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 75/141 (53%), Gaps = 12/141 (8%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
           Y++ S+ +G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++  H +
Sbjct: 25  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV 80
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
              R V +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ 
Sbjct: 81  ---RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 137
Query: 209 FMHELRLIHTDLKPENILLVS 229
           ++H + + H D+KPEN+L  S
Sbjct: 138 YLHSINIAHRDVKPENLLYTS 158

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 20  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 80  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 134
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+LE+V   H   ++H D+K ENIL+
Sbjct: 135 FFWQVLEAVRHCHNCGVLHRDIKDENILI 163

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 8/136 (5%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           RY ++  +G G FG      D +  ELVA+K +    K       EI +  R  RH    
Sbjct: 20  RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREI-INHRSLRH---- 74
Query: 153 TRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V+ +       H+ IV E   G  L++  R  +   F  D  R   +QL+  V++ H
Sbjct: 75  PNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSYCH 132
Query: 212 ELRLIHTDLKPENILL 227
            +++ H DLK EN LL
Sbjct: 133 AMQVCHRDLKLENTLL 148

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 5   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 65  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 119
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+LE+V   H   ++H D+K ENIL+
Sbjct: 120 FFWQVLEAVRHCHNCGVLHRDIKDENILI 148

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 75/141 (53%), Gaps = 12/141 (8%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
           Y++ S+ +G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++  H +
Sbjct: 17  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV 72
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
              R V +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ 
Sbjct: 73  ---RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 129
Query: 209 FMHELRLIHTDLKPENILLVS 229
           ++H + + H D+KPEN+L  S
Sbjct: 130 YLHSINIAHRDVKPENLLYTS 150

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 20  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 80  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 134
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+LE+V   H   ++H D+K ENIL+
Sbjct: 135 FFWQVLEAVRHCHNCGVLHRDIKDENILI 163

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 75/141 (53%), Gaps = 12/141 (8%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
           Y++ S+ +G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++  H +
Sbjct: 24  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV 79
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
              R V +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ 
Sbjct: 80  ---RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 136
Query: 209 FMHELRLIHTDLKPENILLVS 229
           ++H + + H D+KPEN+L  S
Sbjct: 137 YLHSINIAHRDVKPENLLYTS 157

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           ++ +G+G FGQVV+  +       AIK +R   +     + E+ +L  L    +      
Sbjct: 11  IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAA 70
Query: 157 QIRNWFDYRNHI---------CIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQL 203
               W + RN +           +F +       +LYD +   +      +  R L RQ+
Sbjct: 71  ----WLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR-LFRQI 125
Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH 245
           LE+++++H   +IH +LKP NI +  +  VK+ D+ +    H
Sbjct: 126 LEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVH 167

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 19  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 79  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 133
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+LE+V   H   ++H D+K ENIL+
Sbjct: 134 FFWQVLEAVRHCHNCGVLHRDIKDENILI 162

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 39  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 98
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 99  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 153
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+LE+V   H   ++H D+K ENIL+
Sbjct: 154 FFWQVLEAVRHCHNCGVLHRDIKDENILI 182

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 33  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 93  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 147
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+LE+V   H   ++H D+K ENIL+
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILI 176

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 75/141 (53%), Gaps = 12/141 (8%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
           Y++ S+ +G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++  H +
Sbjct: 23  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV 78
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
              R V +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ 
Sbjct: 79  ---RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 135
Query: 209 FMHELRLIHTDLKPENILLVS 229
           ++H + + H D+KPEN+L  S
Sbjct: 136 YLHSINIAHRDVKPENLLYTS 156

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 75/141 (53%), Gaps = 12/141 (8%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
           Y++ S+ +G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++  H +
Sbjct: 18  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV 73
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
              R V +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ 
Sbjct: 74  ---RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 130
Query: 209 FMHELRLIHTDLKPENILLVS 229
           ++H + + H D+KPEN+L  S
Sbjct: 131 YLHSINIAHRDVKPENLLYTS 151

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 33  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 93  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 147
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+LE+V   H   ++H D+K ENIL+
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILI 176

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 8/147 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++  N   EA + E  V+++L RH+    +
Sbjct: 188 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGNMSPEAFLQEAQVMKKL-RHE----K 241
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+         I IV E +   SL DFL+    +   +  + ++  Q+   +A++  +
Sbjct: 242 LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 300
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKV 240
             +H DL+  NIL+      KV D+ +
Sbjct: 301 NYVHRDLRAANILVGENLVCKVADFGL 327

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 52  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 111
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 112 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 166
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+LE+V   H   ++H D+K ENIL+
Sbjct: 167 FFWQVLEAVRHCHNCGVLHRDIKDENILI 195

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 47  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 107 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 161
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+LE+V   H   ++H D+K ENIL+
Sbjct: 162 FFWQVLEAVRHCHNCGVLHRDIKDENILI 190

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 32  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 92  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 146
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+LE+V   H   ++H D+K ENIL+
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILI 175

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 33  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 93  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 147
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+LE+V   H   ++H D+K ENIL+
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILI 176

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 33  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 93  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 147
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+LE+V   H   ++H D+K ENIL+
Sbjct: 148 FFWQVLEAVRHCHNCGVLHRDIKDENILI 176

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 32  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 92  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 146
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+LE+V   H   ++H D+K ENIL+
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILI 175

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 75/141 (53%), Gaps = 12/141 (8%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
           Y++ S+ +G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++  H +
Sbjct: 19  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV 74
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
              R V +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ 
Sbjct: 75  ---RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 131
Query: 209 FMHELRLIHTDLKPENILLVS 229
           ++H + + H D+KPEN+L  S
Sbjct: 132 YLHSINIAHRDVKPENLLYTS 152

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 27  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 86
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 87  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 141
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+LE+V   H   ++H D+K ENIL+
Sbjct: 142 FFWQVLEAVRHCHNCGVLHRDIKDENILI 170

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 75/141 (53%), Gaps = 12/141 (8%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
           Y++ S+ +G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++  H +
Sbjct: 17  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV 72
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
              R V +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ 
Sbjct: 73  ---RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 129
Query: 209 FMHELRLIHTDLKPENILLVS 229
           ++H + + H D+KPEN+L  S
Sbjct: 130 YLHSINIAHRDVKPENLLYTS 150

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKS---QKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDF 169

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 47  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 107 LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 161
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+LE+V   H   ++H D+K ENIL+
Sbjct: 162 FFWQVLEAVRHCHNCGVLHRDIKDENILI 190

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 75/141 (53%), Gaps = 12/141 (8%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
           Y++ S+ +G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++  H +
Sbjct: 19  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV 74
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
              R V +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ 
Sbjct: 75  ---RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 131
Query: 209 FMHELRLIHTDLKPENILLVS 229
           ++H + + H D+KPEN+L  S
Sbjct: 132 YLHSINIAHRDVKPENLLYTS 152

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 32  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 92  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 146
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+LE+V   H   ++H D+K ENIL+
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILI 175

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 75/141 (53%), Gaps = 12/141 (8%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
           Y++ S+ +G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++  H +
Sbjct: 19  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV 74
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
              R V +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ 
Sbjct: 75  ---RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 131
Query: 209 FMHELRLIHTDLKPENILLVS 229
           ++H + + H D+KPEN+L  S
Sbjct: 132 YLHSINIAHRDVKPENLLYTS 152

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 5   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 65  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 119
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+LE+V   H   ++H D+K ENIL+
Sbjct: 120 FFWQVLEAVRHCHNCGVLHRDIKDENILI 148

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 32  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 92  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 146
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+LE+V   H   ++H D+K ENIL+
Sbjct: 147 FFWQVLEAVRHCHNCGVLHRDIKDENILI 175

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 4   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 64  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 118
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+LE+V   H   ++H D+K ENIL+
Sbjct: 119 FFWQVLEAVRHCHNCGVLHRDIKDENILI 147

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 75/141 (53%), Gaps = 12/141 (8%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
           Y++ S+ +G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++  H +
Sbjct: 63  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV 118
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
              R V +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ 
Sbjct: 119 ---RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 175
Query: 209 FMHELRLIHTDLKPENILLVS 229
           ++H + + H D+KPEN+L  S
Sbjct: 176 YLHSINIAHRDVKPENLLYTS 196

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 75/141 (53%), Gaps = 12/141 (8%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
           Y++ S+ +G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++  H +
Sbjct: 69  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCPHIV 124
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
              R V +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ 
Sbjct: 125 ---RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 181
Query: 209 FMHELRLIHTDLKPENILLVS 229
           ++H + + H D+KPEN+L  S
Sbjct: 182 YLHSINIAHRDVKPENLLYTS 202

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 82/164 (50%), Gaps = 9/164 (5%)
Query: 83  VFAIGENLT-PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV 141
           VF   E++    + IL  +G+G+FG+V     N+ K++ A+K    +NK +     E+  
Sbjct: 5   VFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKY---MNKQKCVERNEVRN 61
Query: 142 LQRLARHDIGGTRCVQIRNWFDYRNH---ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE 198
           + +  +   G      +  W+ +++      +V   LG  L   L++N +  F  + V+ 
Sbjct: 62  VFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH--FKEETVKL 119
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
              +L+ ++ ++   R+IH D+KP+NILL    +V + D+ + +
Sbjct: 120 FICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAA 163

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 79/150 (52%), Gaps = 17/150 (11%)
Query: 100 MGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGG 152
           +GEG FG+V + C+D   +   E+VA+K +++    ++R     EID+L+ L   H I  
Sbjct: 22  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL--GRQLLESVAFM 210
             C + +   +    + + +  LG SL D+L ++S     I L + L   +Q+ E +A++
Sbjct: 82  KGCCEDQG--EKSLQLVMEYVPLG-SLRDYLPRHS-----IGLAQLLLFAQQICEGMAYL 133
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           H    IH +L   N+LL +   VK+ D+ +
Sbjct: 134 HSQHYIHRNLAARNVLLDNDRLVKIGDFGL 163

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 5   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 65  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 119
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+LE+V   H   ++H D+K ENIL+
Sbjct: 120 FFWQVLEAVRHCHNCGVLHRDIKDENILI 148

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 8/147 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    +
Sbjct: 270 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 323
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+         I IV E +   SL DFL+  + +   +  + ++  Q+   +A++  +
Sbjct: 324 LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 382
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKV 240
             +H DL+  NIL+      KV D+ +
Sbjct: 383 NYVHRDLRAANILVGENLVCKVADFGL 409

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 75/146 (51%), Gaps = 10/146 (6%)
Query: 95  RILSKMGEGTFGQV-VECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           +++ ++G G FG+V +  ++   K  VAIK ++      E+ + E  ++++L +HD    
Sbjct: 12  QLIKRLGNGQFGEVWMGTWNGNTK--VAIKTLKPGTMSPESFLEEAQIMKKL-KHD---- 64
Query: 154 RCVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
           + VQ+         I IV E +   SL DFL+    R+  +  + ++  Q+   +A++  
Sbjct: 65  KLVQLYAVVS-EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER 123
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDY 238
           +  IH DL+  NIL+ +    K+ D+
Sbjct: 124 MNYIHRDLRSANILVGNGLICKIADF 149

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 79/150 (52%), Gaps = 17/150 (11%)
Query: 100 MGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGG 152
           +GEG FG+V + C+D   +   E+VA+K +++    ++R     EID+L+ L   H I  
Sbjct: 22  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL--GRQLLESVAFM 210
             C + +   +    + + +  LG SL D+L ++S     I L + L   +Q+ E +A++
Sbjct: 82  KGCCEDQG--EKSLQLVMEYVPLG-SLRDYLPRHS-----IGLAQLLLFAQQICEGMAYL 133
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           H    IH +L   N+LL +   VK+ D+ +
Sbjct: 134 HAQHYIHRNLAARNVLLDNDRLVKIGDFGL 163

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 90  LTPRYRILSKMGEGTFGQVVECFDNE---KKELVAIKIVRSINKYREAAMI--EIDVLQR 144
           L  +Y +   +GEG++G+V E  D+E   ++ +  +K  +        A +  EI +L+R
Sbjct: 3   LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRR 62
Query: 145 LARHDIGGTRCVQIRN--WFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           L   ++     +Q+ +  + + +  + +V E     + + L     + FP+        Q
Sbjct: 63  LRHKNV-----IQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQ 117
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS 248
           L++ + ++H   ++H D+KP N+LL +   +K+    V    H F+
Sbjct: 118 LIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ 
Sbjct: 3   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 62
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRE 198
           +L++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 63  LLKKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARS 117
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+LE+V   H   ++H D+K ENIL+
Sbjct: 118 FFWQVLEAVRHCHNCGVLHRDIKDENILI 146

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 16/136 (11%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 158
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 218
Query: 212 ELRLIHTDLKPENILL 227
              + H D+KP+N+LL
Sbjct: 219 SFGICHRDIKPQNLLL 234

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++         D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKXQKLTD---DHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDF 169

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 73/147 (49%), Gaps = 8/147 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 12  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 70
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 71  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 124
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKV 240
             IH +L+  NIL+      K+ D+ +
Sbjct: 125 NYIHRNLRAANILVSDTLSCKIADFGL 151

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++  +  +  
Sbjct: 43  QFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E   G  ++  LR+    S P    R    Q++ +  ++H
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 159
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+L+    Y+KV D+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIKVADF 186

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 16/136 (11%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 66  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 117
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 177
Query: 212 ELRLIHTDLKPENILL 227
              + H D+KP+N+LL
Sbjct: 178 SFGICHRDIKPQNLLL 193

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 16/136 (11%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 62  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 113
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 212 ELRLIHTDLKPENILL 227
              + H D+KP+N+LL
Sbjct: 174 SFGICHRDIKPQNLLL 189

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    +
Sbjct: 11  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 64
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+         I IV E +   SL DFL+  + +   +  + ++  Q+   +A++  +
Sbjct: 65  LVQLYAVVS-EEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 123
Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             +H DL+  NIL+      KV D+
Sbjct: 124 NYVHRDLRAANILVGENLVCKVADF 148

>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1 Length = 330

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 10/148 (6%)
Query: 80  GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEI 139
           G  V  +G    P +R+  K+G G FG++    +    E VAIK+     +  ++   ++
Sbjct: 1   GSGVLMVG----PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-----EPMKSRAPQL 51
Query: 140 DVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
            +  R  +    G    Q+  +     +  +V E LGPSL D       R+F +  V  +
Sbjct: 52  HLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMI 110
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILL 227
             QL+  + ++H   LI+ D+KPEN L+
Sbjct: 111 AIQLISRMEYVHSKNLIYRDVKPENFLI 138

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 16/136 (11%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 56  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 107
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 108 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 167
Query: 212 ELRLIHTDLKPENILL 227
              + H D+KP+N+LL
Sbjct: 168 SFGICHRDIKPQNLLL 183

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 16/136 (11%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 64  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 115
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 175
Query: 212 ELRLIHTDLKPENILL 227
              + H D+KP+N+LL
Sbjct: 176 SFGICHRDIKPQNLLL 191

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDIG 151
           Y +   +G+G F  V  C + E  +  A+KIV  + K+  +  +  + L+R A   H + 
Sbjct: 28  YELCEVIGKGPFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 86
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDF---LRKNSYRSFPIDLVRELGRQLLESVA 208
               V++   +     + +VFE +  +   F    R ++   +   +     RQ+LE++ 
Sbjct: 87  HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 146
Query: 209 FMHELRLIHTDLKPENILLVSAE 231
           + H+  +IH D+KP  +LL S E
Sbjct: 147 YCHDNNIIHRDVKPHCVLLASKE 169

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDIG 151
           Y +   +G+G F  V  C + E  +  A+KIV  + K+  +  +  + L+R A   H + 
Sbjct: 26  YELCEVIGKGPFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDF---LRKNSYRSFPIDLVRELGRQLLESVA 208
               V++   +     + +VFE +  +   F    R ++   +   +     RQ+LE++ 
Sbjct: 85  HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 209 FMHELRLIHTDLKPENILLVSAE 231
           + H+  +IH D+KP  +LL S E
Sbjct: 145 YCHDNNIIHRDVKPHCVLLASKE 167

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 16/136 (11%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 33  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 84
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 85  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 144
Query: 212 ELRLIHTDLKPENILL 227
              + H D+KP+N+LL
Sbjct: 145 SFGICHRDIKPQNLLL 160

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 86/181 (47%), Gaps = 25/181 (13%)
Query: 80  GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR------------- 126
           G YV      +   Y  + K+G G +G+V+ C +       AIK+++             
Sbjct: 24  GMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDN 83
Query: 127 -SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLR 184
            +I K+ E    EI +L+ L   +I     +++ + F+ + +  +V E   G  L++ + 
Sbjct: 84  KNIEKFHEEIYNEISLLKSLDHPNI-----IKLFDVFEDKKYFYLVTEFYEGGELFEQII 138
Query: 185 KNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY---VKVPDYKVP 241
            N ++    D    + +Q+L  + ++H+  ++H D+KPENILL +      +K+ D+ + 
Sbjct: 139 -NRHKFDECDAAN-IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLS 196
Query: 242 S 242
           S
Sbjct: 197 S 197

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY-------REAAMIEIDVLQRLA 146
           Y I  ++G G F  V +C +       A K ++            RE    E+ +L+++ 
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
             +I     + + + ++ R  + ++ E + G  L+DFL +    S   +      +Q+L+
Sbjct: 74  HPNI-----ITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILD 126
Query: 206 SVAFMHELRLIHTDLKPENILLVSAE----YVKVPDY 238
            V ++H  ++ H DLKPENI+L+       ++K+ D+
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDF 163

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 22/169 (13%)
Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRL 145
           G +L  RY  L  +G G  G V    DN+  + VAIK IV +  +  + A+ EI +++RL
Sbjct: 6   GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL 65
Query: 146 ARHDI---------GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLV 196
              +I          G++           N + IV E +   L + L +         L+
Sbjct: 66  DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP-------LL 118
Query: 197 RELGR----QLLESVAFMHELRLIHTDLKPENILLVSAEYV-KVPDYKV 240
            E  R    QLL  + ++H   ++H DLKP N+ + + + V K+ D+ +
Sbjct: 119 EEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGL 167

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 16/136 (11%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 32  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 83
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 84  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 143
Query: 212 ELRLIHTDLKPENILL 227
              + H D+KP+N+LL
Sbjct: 144 SFGICHRDIKPQNLLL 159

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 16/136 (11%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 79
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 80  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 212 ELRLIHTDLKPENILL 227
              + H D+KP+N+LL
Sbjct: 140 SFGICHRDIKPQNLLL 155

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 16/136 (11%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 40  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 91
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 92  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 212 ELRLIHTDLKPENILL 227
              + H D+KP+N+LL
Sbjct: 152 SFGICHRDIKPQNLLL 167

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 16/136 (11%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 79
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 80  YFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 212 ELRLIHTDLKPENILL 227
              + H D+KP+N+LL
Sbjct: 140 SFGICHRDIKPQNLLL 155

>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3 Length = 351

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 92  PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG 151
           P +R+  K+G G FG++    +    E VAIK+     +  ++   ++ +  R  +    
Sbjct: 30  PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-----EPMKSRAPQLHLEYRFYKQLGS 84
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
           G    Q+  +     +  +V E LGPSL D       R+F +  V  +  QL+  + ++H
Sbjct: 85  GDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVH 143
Query: 212 ELRLIHTDLKPENILL 227
              LI+ D+KPEN L+
Sbjct: 144 SKNLIYRDVKPENFLI 159

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    +
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 240
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+         I IV E +   SL DFL+  + +   +  + ++  Q+   +A++  +
Sbjct: 241 LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             +H DL+  NIL+      KV D+
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADF 324

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 16/136 (11%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 29  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 80
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 81  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 140
Query: 212 ELRLIHTDLKPENILL 227
              + H D+KP+N+LL
Sbjct: 141 SFGICHRDIKPQNLLL 156

>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With Inhibitor Length = 330

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 92  PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG 151
           P +R+  K+G G FG++    +    E VAIK+     +  ++   ++ +  R  +    
Sbjct: 9   PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-----EPMKSRAPQLHLEYRFYKQLGS 63
Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
           G    Q+  +     +  +V E LGPSL D       R+F +  V  +  QL+  + ++H
Sbjct: 64  GDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVH 122
Query: 212 ELRLIHTDLKPENILL 227
              LI+ D+KPEN L+
Sbjct: 123 SKNLIYRDVKPENFLI 138

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    +
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 240
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+         I IV E +   SL DFL+  + +   +  + ++  Q+   +A++  +
Sbjct: 241 LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             +H DL+  NIL+      KV D+
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADF 324

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 16/136 (11%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 62  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 113
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 173
Query: 212 ELRLIHTDLKPENILL 227
              + H D+KP+N+LL
Sbjct: 174 SFGICHRDIKPQNLLL 189

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 16/136 (11%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 36  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 87
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 88  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 147
Query: 212 ELRLIHTDLKPENILL 227
              + H D+KP+N+LL
Sbjct: 148 SFGICHRDIKPQNLLL 163

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 16/136 (11%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 41  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 92
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 93  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 152
Query: 212 ELRLIHTDLKPENILL 227
              + H D+KP+N+LL
Sbjct: 153 SFGICHRDIKPQNLLL 168

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 16/136 (11%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 79
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 80  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 212 ELRLIHTDLKPENILL 227
              + H D+KP+N+LL
Sbjct: 140 SFGICHRDIKPQNLLL 155

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 16/136 (11%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 40  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 91
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 92  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 151
Query: 212 ELRLIHTDLKPENILL 227
              + H D+KP+N+LL
Sbjct: 152 SFGICHRDIKPQNLLL 167

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 16/136 (11%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 47  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 98
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 99  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 158
Query: 212 ELRLIHTDLKPENILL 227
              + H D+KP+N+LL
Sbjct: 159 SFGICHRDIKPQNLLL 174

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 74/141 (52%), Gaps = 12/141 (8%)
Query: 94  YRILSK-MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR--HDI 150
           Y++ S+ +G G  G+V++ F+   +E  A+K ++   K R     E+++  R ++  H +
Sbjct: 63  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARR----EVELHWRASQCPHIV 118
Query: 151 GGTRCVQI-RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
              R V +  N +  R  + IV E L G  L+  ++    ++F      E+ + + E++ 
Sbjct: 119 ---RIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQ 175
Query: 209 FMHELRLIHTDLKPENILLVS 229
           ++H + + H D+KPEN+L  S
Sbjct: 176 YLHSINIAHRDVKPENLLYTS 196

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 83
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 84  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 139
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDF 175

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 79
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 80  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 135
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDF 171

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    +
Sbjct: 14  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 67
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+         I IV E +   SL DFL+  + +   +  + ++  Q+   +A++  +
Sbjct: 68  LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 126
Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             +H DL+  NIL+      KV D+
Sbjct: 127 NYVHRDLRAANILVGENLVCKVADF 151

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 16/136 (11%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V    +++     E+ ++++L   +I     V++R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNI-----VRLR 79
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 80  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 212 ELRLIHTDLKPENILL 227
              + H D+KP+N+LL
Sbjct: 140 SFGICHRDIKPQNLLL 155

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ DY
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDY 169

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 14/147 (9%)
Query: 90  LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEIDVL 142
           L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ +L
Sbjct: 2   LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELG 200
           ++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R   
Sbjct: 62  KKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 116
Query: 201 RQLLESVAFMHELRLIHTDLKPENILL 227
            Q+LE+V   H   ++H D+K ENIL+
Sbjct: 117 WQVLEAVRHCHNCGVLHRDIKDENILI 143

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 14/147 (9%)
Query: 90  LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEIDVL 142
           L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ +L
Sbjct: 2   LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELG 200
           ++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R   
Sbjct: 62  KKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 116
Query: 201 RQLLESVAFMHELRLIHTDLKPENILL 227
            Q+LE+V   H   ++H D+K ENIL+
Sbjct: 117 WQVLEAVRHCHNXGVLHRDIKDENILI 143

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 42  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 96
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 97  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 152
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 188

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 8/147 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    +
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 240
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+         I IV E +   SL DFL+  + +   +  + ++  Q+   +A++  +
Sbjct: 241 LVQLYAVVS-EEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKV 240
             +H DL+  NIL+      KV D+ +
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGL 326

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 73
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 74  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 129
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 165

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 73
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 74  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 129
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 165

>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2 Length = 313

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH 148
           ++ P +R+  K+G G FG++    +    E VAIK+   I        +E    ++L+  
Sbjct: 1   SMGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPIKSRAPQLHLEYRFYKQLS-- 57
Query: 149 DIGGTRCV-QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
               T  V Q+  +     +  +V E LGPSL D       R+F +  V  +  QL+  +
Sbjct: 58  ---ATEGVPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCD-RTFTLKTVLMIAIQLITRM 113
Query: 208 AFMHELRLIHTDLKPENILL 227
            ++H   LI+ D+KPEN L+
Sbjct: 114 EYVHTKSLIYRDVKPENFLV 133

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 16/136 (11%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V     ++     E+ ++++L   +I     V++R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNI-----VRLR 79
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 80  YFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 212 ELRLIHTDLKPENILL 227
              + H D+KP+N+LL
Sbjct: 140 SFGICHRDIKPQNLLL 155

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 43  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 97
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 98  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 153
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 189

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 14/147 (9%)
Query: 90  LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREA-----AMIEIDVL 142
           L  +Y++   +G G FG V           VAIK V    I+ + E        +E+ +L
Sbjct: 2   LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELG 200
           ++++    G +  +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R   
Sbjct: 62  KKVSS---GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 116
Query: 201 RQLLESVAFMHELRLIHTDLKPENILL 227
            Q+LE+V   H   ++H D+K ENIL+
Sbjct: 117 WQVLEAVRHCHNCGVLHRDIKDENILI 143

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 83
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 84  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 139
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 175

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 11/150 (7%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAA--MIEIDVLQRLARHD 149
           +  L  +G+G+FG+V+      ++   A+K++  ++I K +E    M E +VL +  +H 
Sbjct: 40  FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                 V +   F   + +  V + + G  L+  L++   R F     R    ++  ++ 
Sbjct: 100 F----LVGLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALG 153
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++H L +++ DLKPENILL S  ++ + D+
Sbjct: 154 YLHSLNIVYRDLKPENILLDSQGHIVLTDF 183

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 34  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 88
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 89  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 144
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDF 180

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    +
Sbjct: 18  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 71
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+         I IV E +   SL DFL+  + +   +  + ++  Q+   +A++  +
Sbjct: 72  LVQLYAVVS-EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             +H DL+  NIL+      KV D+
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADF 155

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    +
Sbjct: 18  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 71
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+         I IV E +   SL DFL+  + +   +  + ++  Q+   +A++  +
Sbjct: 72  LVQLYAVVS-EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             +H DL+  NIL+      KV D+
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADF 155

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 28  RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 82
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 83  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 138
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDF 174

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 43  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 97
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 98  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 153
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 189

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 42  QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+L+    Y+KV D+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADF 185

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 42  QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+L+    Y+KV D+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADF 185

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 169

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 7/148 (4%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           + IL  +G G F +V      +  ++ A+KI   +NK+      E+   +      + G 
Sbjct: 63  FEILKVIGRGAFSEVAVVKMKQTGQVYAMKI---MNKWDMLKRGEVSCFREERDVLVNGD 119
Query: 154 R--CVQIRNWFDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           R    Q+   F   N++ +V E  +G  L   L K   R  P ++ R    +++ ++  +
Sbjct: 120 RRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGER-IPAEMARFYLAEIVMAIDSV 178
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H L  +H D+KP+NILL    ++++ D+
Sbjct: 179 HRLGYVHRDIKPDNILLDRCGHIRLADF 206

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 29/201 (14%)
Query: 51  GMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRI-------LSKMGEG 103
           G+   A + M +    R+GSP      ++     A      P++R+       L  +G+G
Sbjct: 109 GLKKQAAAEMDF----RSGSPSDNSGAEEMEVSLA-----KPKHRVTMNEFEYLKLLGKG 159
Query: 104 TFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHDIGGTRCVQIR 159
           TFG+V+   +       A+KI++   I    E A  + E  VLQ  +RH         ++
Sbjct: 160 TFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPF----LTALK 214
Query: 160 NWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH-ELRLIH 217
             F   + +C V E   G  L+  L +   R F  D  R  G +++ ++ ++H E  +++
Sbjct: 215 YSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVY 272
Query: 218 TDLKPENILLVSAEYVKVPDY 238
            DLK EN++L    ++K+ D+
Sbjct: 273 RDLKLENLMLDKDGHIKITDF 293

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 169

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 28  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 82
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 83  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 138
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDF 174

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 169

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 8/147 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    +
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 74
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+         I IV E +   SL DFL+    +   +  + ++  Q+   +A++  +
Sbjct: 75  LVQLYAVVS-EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKV 240
             +H DL+  NIL+      KV D+ +
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGL 160

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 20/163 (12%)
Query: 81  HYVFAIGENLTPR------------YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI 128
           +YVF I +   P+            Y I  ++G G FG V    +       A K V + 
Sbjct: 134 NYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP 193
Query: 129 NKY-REAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKN 186
           ++  +E    EI  +  L RH       V + + F+  N + +++E + G  L++ +  +
Sbjct: 194 HESDKETVRKEIQTMSVL-RHPT----LVNLHDAFEDDNEMVMIYEFMSGGELFEKV-AD 247
Query: 187 SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS 229
            +     D   E  RQ+ + +  MHE   +H DLKPENI+  +
Sbjct: 248 EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT 290

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 8/147 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    +
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 74
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+         I IV E +   SL DFL+    +   +  + ++  Q+   +A++  +
Sbjct: 75  LVQLYAVVS-EEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKV 240
             +H DL+  NIL+      KV D+ +
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGL 160

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+L+    Y++V D+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDF 185

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+L+    Y++V D+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDF 185

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 169

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+L+    Y++V D+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDF 185

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 20/163 (12%)
Query: 81  HYVFAIGENLTPR------------YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI 128
           +YVF I +   P+            Y I  ++G G FG V    +       A K V + 
Sbjct: 28  NYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP 87
Query: 129 NKY-REAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKN 186
           ++  +E    EI  +  L RH       V + + F+  N + +++E + G  L++ +  +
Sbjct: 88  HESDKETVRKEIQTMSVL-RHPT----LVNLHDAFEDDNEMVMIYEFMSGGELFEKV-AD 141
Query: 187 SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS 229
            +     D   E  RQ+ + +  MHE   +H DLKPENI+  +
Sbjct: 142 EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT 184

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +++ ++G G  G+V   + N   + VA+K ++  +   +A + E +++++L    +    
Sbjct: 16  KLVERLGAGQAGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V  +        I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ E 
Sbjct: 75  AVVTQE------PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             IH DL+  NIL+      K+ D+
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADF 153

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 16/136 (11%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V     ++     E+ ++++L   +I     V++R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNI-----VRLR 79
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 80  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 212 ELRLIHTDLKPENILL 227
              + H D+KP+N+LL
Sbjct: 140 SFGICHRDIKPQNLLL 155

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 16/136 (11%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G+FG V +    +  ELVAIK V     ++     E+ ++++L   +I     V++R
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKLDHCNI-----VRLR 79
Query: 160 NWFDYRN------HICIVFEKLGPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMH 211
            +F          ++ +V + +  ++Y   R  S   ++ P+  V+    QL  S+A++H
Sbjct: 80  YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139
Query: 212 ELRLIHTDLKPENILL 227
              + H D+KP+N+LL
Sbjct: 140 SFGICHRDIKPQNLLL 155

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 86  IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-----EID 140
           IGE +   +++ + +G+G+F  V           VAIK++     Y+ A M+     E+ 
Sbjct: 6   IGEKIED-FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK-AGMVQRVQNEVK 63
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG 200
           +  +L    I     +++ N+F+  N++ +V E       +   KN  + F  +  R   
Sbjct: 64  IHCQLKHPSI-----LELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFM 118
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY------KVPSPRH 245
            Q++  + ++H   ++H DL   N+LL     +K+ D+      K+P  +H
Sbjct: 119 HQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH 169

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 72/145 (49%), Gaps = 7/145 (4%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +++ K+G G FG+V   + N   + VA+K ++      +A + E ++++ L +HD    +
Sbjct: 15  KLVKKLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAFLEEANLMKTL-QHD----K 68
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V++         I I+ E +   SL DFL+ +      +  + +   Q+ E +A++   
Sbjct: 69  LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK 128
Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             IH DL+  N+L+  +   K+ D+
Sbjct: 129 NYIHRDLRAANVLVSESLMCKIADF 153

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++         D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKXQKLTD---DHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 169

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 78/154 (50%), Gaps = 18/154 (11%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTR 154
           L ++G G +G V +       +++A+K +RS    K ++  ++++DV+ R        + 
Sbjct: 27  LGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMR-------SSD 79
Query: 155 CVQIRNWFD--YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE--LGRQLLESVAFM 210
           C  I  ++   +R   C +  +L  + +D   K  Y S   D++ E  LG+  L +V  +
Sbjct: 80  CPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVY-SVLDDVIPEEILGKITLATVKAL 138
Query: 211 H----ELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           +     L++IH D+KP NILL  +  +K+ D+ +
Sbjct: 139 NHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGI 172

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 73
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++         D V+ L  Q
Sbjct: 74  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVKCAKLTD---DHVQFLIYQ 129
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 165

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 42  QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+L+    Y+KV D+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADF 185

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 14/151 (9%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA----MIEIDVLQRLARHD 149
           + I+  +G+G FG V    + + K ++A+K++      +E        EI++   L   +
Sbjct: 16  FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           I     +++ N+F  R  I ++ E   P   LY  L+K+    F          +L +++
Sbjct: 76  I-----LRMYNYFHDRKRIYLMLE-FAPRGELYKELQKHG--RFDEQRSATFMEELADAL 127
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            + HE ++IH D+KPEN+L+     +K+ D+
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKGELKIADF 158

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 12/155 (7%)
Query: 94  YRILSKM-GEGTFGQVVECFDNEKKELVAIKIV-RSINKYREAAMIEIDVLQRLARHDIG 151
           Y++ S++ GEG + +V      +  +  A+KI+ +     R     E++ L +      G
Sbjct: 14  YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQ----G 69
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               +++  +F+      +VFEKL G S+   ++K  +  F       + R +  ++ F+
Sbjct: 70  NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH--FNEREASRVVRDVAAALDFL 127
Query: 211 HELRLIHTDLKPENILLVSAEY---VKVPDYKVPS 242
           H   + H DLKPENIL  S E    VK+ D+ + S
Sbjct: 128 HTKGIAHRDLKPENILCESPEKVSPVKICDFDLGS 162

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 16/145 (11%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G FG V  C    + + VAIK + S ++ R+A ++E+  L R+   +I       ++
Sbjct: 17  VGRGAFGVV--CKAKWRAKDVAIKQIESESE-RKAFIVELRQLSRVNHPNI-------VK 66
Query: 160 NWFDYRNHICIVFEKL-GPSLYDFLR-KNSYRSFPIDLVRELGRQLLESVAFMHELR--- 214
            +    N +C+V E   G SLY+ L        +          Q  + VA++H ++   
Sbjct: 67  LYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 126
Query: 215 LIHTDLKPENILLVSAEYV-KVPDY 238
           LIH DLKP N+LLV+   V K+ D+
Sbjct: 127 LIHRDLKPPNLLLVAGGTVLKICDF 151

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 101
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 159
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+L+    Y++V D+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDF 186

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 101
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 159
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+L+    Y++V D+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDF 186

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 63  QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 121
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 179
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+L+    Y++V D+
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDF 206

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           L +MG GT GQV +    +   ++A+K +R      E   I +D+   L  HD      V
Sbjct: 30  LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDC--PYIV 87
Query: 157 QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR-L 215
           Q    F     + I  E +G +  + L+K      P  ++ ++   +++++ ++ E   +
Sbjct: 88  QCFGTFITNTDVFIAMELMG-TCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGV 146
Query: 216 IHTDLKPENILLVSAEYVKVPDYKV 240
           IH D+KP NILL     +K+ D+ +
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGI 171

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 35  QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 93
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H
Sbjct: 94  PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 151
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+L+    Y++V D+
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDF 178

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 101
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 159
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+L+    Y++V D+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDF 186

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 67  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 125
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 126 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 183
Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           I+ DLKPEN+L+    Y++V D+
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDF 206

>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With 2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9- Isopropylpurine (Casp Target) Length = 310

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 5/133 (3%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G G FG++    +    E VAIK+   I        +E    ++L      G  
Sbjct: 3   RVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPIKSRAPQLHLEYRFYKQLGS---AGEG 58
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
             Q+  +     +  +V E LGPSL D       R+F +  V  +  QLL  + ++H   
Sbjct: 59  LPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCD-RTFTLKTVLMIAIQLLSRMEYVHSKN 117
Query: 215 LIHTDLKPENILL 227
           LI+ D+KPEN L+
Sbjct: 118 LIYRDVKPENFLI 130

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           ++IL  +G G+FG+V            A+K+++     R    +E    +RL    +   
Sbjct: 8   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVR-LKQVEHTNDERLMLSIVTHP 66
Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
             +++   F     I ++ + + G  L+  LRK+  + FP  + +    ++  ++ ++H 
Sbjct: 67  FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHS 124
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDY 238
             +I+ DLKPENILL    ++K+ D+
Sbjct: 125 KDIIYRDLKPENILLDKNGHIKITDF 150

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           I+ DLKPEN+L+    Y++V D+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDF 185

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           I+ DLKPEN+L+    Y++V D+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDF 185

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 16/145 (11%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           +G G FG V  C    + + VAIK + S ++ R+A ++E+  L R+   +I       ++
Sbjct: 16  VGRGAFGVV--CKAKWRAKDVAIKQIESESE-RKAFIVELRQLSRVNHPNI-------VK 65
Query: 160 NWFDYRNHICIVFE-KLGPSLYDFLR-KNSYRSFPIDLVRELGRQLLESVAFMHELR--- 214
            +    N +C+V E   G SLY+ L        +          Q  + VA++H ++   
Sbjct: 66  LYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 215 LIHTDLKPENILLVSAEYV-KVPDY 238
           LIH DLKP N+LLV+   V K+ D+
Sbjct: 126 LIHRDLKPPNLLLVAGGTVLKICDF 150

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           I+ DLKPEN+L+    Y++V D+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDF 185

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 8/147 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    +
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 74
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+         I IV E +   SL DFL+    +   +  + ++  Q+   +A++  +
Sbjct: 75  LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKV 240
             +H DL+  NIL+      KV D+ +
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGL 160

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 47  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 105
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 106 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 163
Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           I+ DLKPEN+L+    Y++V D+
Sbjct: 164 IYRDLKPENLLIDQQGYIQVTDF 186

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           I+ DLKPEN+L+    Y++V D+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDF 185

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           I+ DLKPEN+L+    Y++V D+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDF 185

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 8/145 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    +
Sbjct: 10  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 63
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+         I IV E +   SL DFL+    +   +  + ++  Q+   +A++  +
Sbjct: 64  LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 122
Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             +H DL+  NIL+      KV D+
Sbjct: 123 NYVHRDLRAANILVGENLVCKVADF 147

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           I+ DLKPEN+L+    Y++V D+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDF 185

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 33  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 91
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 92  KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 149
Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           I+ DLKPEN+L+    Y++V D+
Sbjct: 150 IYRDLKPENLLIDEQGYIQVTDF 172

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 25/166 (15%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARHD--- 149
           +G G FG+VVE   F   K++ V   A+K+++S      +EA M E+ ++  L +H+   
Sbjct: 39  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 150 ------IGGTRCVQIRNWFDYRNHICIVFEK----LGPSLY-----DFLRKNSYRSFPID 194
                   G   + I  +  Y + +  +  K    LGPSL      + L K   R   + 
Sbjct: 99  NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
            +     Q+ + +AF+     IH D+   N+LL +    K+ D+ +
Sbjct: 159 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL 204

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 21  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 75
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 76  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 131
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 132 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 167

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           I+ DLKPEN+L+    Y++V D+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDF 185

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 86  IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDV 141
           +G N    +RI  K+G G F +V           VA+K V+  +    K R   + EID+
Sbjct: 26  MGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDL 85
Query: 142 LQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLR-----KNSYRSFPIDLV 196
           L++L   ++     ++    F   N + IV E       D  R     K   R  P   V
Sbjct: 86  LKQLNHPNV-----IKYYASFIEDNELNIVLELADAG--DLSRMIKHFKKQKRLIPERTV 138
Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            +   QL  ++  MH  R++H D+KP N+ + +   VK+ D
Sbjct: 139 WKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGD 179

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 8/145 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    +
Sbjct: 12  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 65
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+         I IV E +   SL DFL+    +   +  + ++  Q+   +A++  +
Sbjct: 66  LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 124
Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             +H DL+  NIL+      KV D+
Sbjct: 125 NYVHRDLRAANILVGENLVCKVADF 149

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/152 (22%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           L  +G+GTFG+V+   +       A+KI+R           E+ + +    H +  +R +
Sbjct: 13  LKLLGKGTFGKVILVREKATGRYYAMKILRK----------EVIIAKDEVAHTVTESRVL 62
Query: 157 Q---------IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           Q         ++  F   + +C V E   G  L+  L +   R F  +  R  G +++ +
Sbjct: 63  QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSA 120
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           + ++H   +++ D+K EN++L    ++K+ D+
Sbjct: 121 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDF 152

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 101
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E   G  ++  LR+    S P    R    Q++ +  ++H
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 159
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+++    Y+KV D+
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDF 186

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 43  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 97
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 98  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 153
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 189

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           I+ DLKPEN+L+    Y++V D+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDF 185

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 8/147 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    +
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 74
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+         I IV E +   SL DFL+    +   +  + ++  Q+   +A++  +
Sbjct: 75  LVQLYAVVS-EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKV 240
             +H DL+  NIL+      KV D+ +
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGL 160

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 42  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 96
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 97  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 152
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 188

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 22/156 (14%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI   ++K +   + EI+       H +  
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKEIE-------HTLNE 91
Query: 153 TRCVQIRNW---------FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQ 202
            R +Q  N+         F   +++ +V E   G  ++  LR+    S P    R    Q
Sbjct: 92  KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQ 149
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++ +  ++H L LI+ DLKPEN+++    Y+KV D+
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDF 185

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 79
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 80  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 135
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 171

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           I+ DLKPEN+L+    Y++V D+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDF 185

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           I+ DLKPEN+L+    Y++V D+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDF 185

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 20  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 74
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 75  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 130
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 166

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 84
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 85  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 140
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 176

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 73
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 74  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 129
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 165

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 35  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 89
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 90  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 145
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 181

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 35  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 89
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 90  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 145
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 181

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 35  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRE-----LRLLKH 89
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 90  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 145
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 181

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 169

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 46  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 100
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 101 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 156
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 192

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 84
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 85  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 140
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 176

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 28  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 82
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 83  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 138
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 174

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 79
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 80  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 135
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 171

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/152 (22%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           L  +G+GTFG+V+   +       A+KI+R           E+ + +    H +  +R +
Sbjct: 10  LKLLGKGTFGKVILVREKATGRYYAMKILRK----------EVIIAKDEVAHTVTESRVL 59
Query: 157 Q---------IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           Q         ++  F   + +C V E   G  L+  L +   R F  +  R  G +++ +
Sbjct: 60  QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSA 117
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           + ++H   +++ D+K EN++L    ++K+ D+
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDF 149

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 84
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 85  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 140
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 176

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 84
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 85  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 140
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 176

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/152 (22%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           L  +G+GTFG+V+   +       A+KI+R           E+ + +    H +  +R +
Sbjct: 10  LKLLGKGTFGKVILVREKATGRYYAMKILRK----------EVIIAKDEVAHTVTESRVL 59
Query: 157 Q---------IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           Q         ++  F   + +C V E   G  L+  L +   R F  +  R  G +++ +
Sbjct: 60  QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSA 117
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           + ++H   +++ D+K EN++L    ++K+ D+
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDF 149

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 79
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 80  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 135
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 171

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ L+ +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 33  RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 87
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 88  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 143
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 144 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 179

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/152 (22%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           L  +G+GTFG+V+   +       A+KI+R           E+ + +    H +  +R +
Sbjct: 10  LKLLGKGTFGKVILVREKATGRYYAMKILRK----------EVIIAKDEVAHTVTESRVL 59
Query: 157 Q---------IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           Q         ++  F   + +C V E   G  L+  L +   R F  +  R  G +++ +
Sbjct: 60  QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSA 117
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           + ++H   +++ D+K EN++L    ++K+ D+
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDF 149

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 83
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 84  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 139
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 175

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 169

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 169

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 28  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 82
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 83  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 138
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 174

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 169

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 169

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 169

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 34  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 88
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 89  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 144
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 180

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 80/168 (47%), Gaps = 17/168 (10%)
Query: 74  RPDDKDGHYVFAIGENLTPR--YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY 131
           +P DKD   +        PR   +++ ++G G FG+V   + N   + VA+K ++     
Sbjct: 1   KPWDKDAWEI--------PRESIKLVKRLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMS 51
Query: 132 REAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRS 190
            +A + E ++++ L +HD    + V++         I I+ E +   SL DFL+ +    
Sbjct: 52  VQAFLEEANLMKTL-QHD----KLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGK 106
Query: 191 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
             +  + +   Q+ E +A++     IH DL+  N+L+  +   K+ D+
Sbjct: 107 VLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADF 154

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 22  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 76
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 77  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 132
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 133 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 168

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 83
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 84  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 139
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 175

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 169

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 169

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/152 (22%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           L  +G+GTFG+V+   +       A+KI+R           E+ + +    H +  +R +
Sbjct: 10  LKLLGKGTFGKVILVREKATGRYYAMKILRK----------EVIIAKDEVAHTVTESRVL 59
Query: 157 Q---------IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           Q         ++  F   + +C V E   G  L+  L +   R F  +  R  G +++ +
Sbjct: 60  QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSA 117
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           + ++H   +++ D+K EN++L    ++K+ D+
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDF 149

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 46  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 100
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 101 MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 156
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 192

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 28/159 (17%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARHDIGG 152
           +G G FG+VVE   F   K++ V   A+K+++S      +EA M E+ ++  L +H+   
Sbjct: 46  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 102
Query: 153 TRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGR---------- 201
              V +     +   + ++ E      L +FLR    R    DL +E GR          
Sbjct: 103 -NIVNLLGACTHGGPVLVITEYCCYGDLLNFLR----RKAEADLDKEDGRPLELRDLLHF 157
Query: 202 --QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
             Q+ + +AF+     IH D+   N+LL +    K+ D+
Sbjct: 158 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDF 196

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 20  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 74
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 75  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 130
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 166

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           + L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 44  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 104 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 159
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++   R IH DL   NIL+ +   VK+ D+
Sbjct: 160 YLGTKRYIHRDLATRNILVENENRVKIGDF 189

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 169

>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2 Length = 345

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 26/154 (16%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++ +  K+G G FG +   F   K E  A  +V+   +       E+   QR+A+ D   
Sbjct: 38  QWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKD--- 94
Query: 153 TRCVQI---RNWFDY----------------RNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
             C++    R   DY                R++  +V E+LG  L     +N   +F  
Sbjct: 95  --CIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG--TFKK 150
Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILL 227
             V +LG ++L+ + ++HE   +H D+K  N+LL
Sbjct: 151 STVLQLGIRMLDVLEYIHENEYVHGDIKAANLLL 184

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 84/182 (46%), Gaps = 20/182 (10%)
Query: 81  HYVFAIGENLTP-RYRILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSIN---KYRE 133
           H+V A  E   P  + +L  +G+G+FG+V    +    +   L A+K+++      + R 
Sbjct: 16  HHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRV 75
Query: 134 AAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFP 192
              +E D+L      D+     V++   F     + ++ + L G  L+  L K     F 
Sbjct: 76  RTKMERDILA-----DVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FT 128
Query: 193 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY-----KVPSPRHAF 247
            + V+    +L   +  +H L +I+ DLKPENILL    ++K+ D+      +   + A+
Sbjct: 129 EEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAY 188
Query: 248 SF 249
           SF
Sbjct: 189 SF 190

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           + L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 19  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 79  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 134
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++   R IH DL   NIL+ +   VK+ D+
Sbjct: 135 YLGTKRYIHRDLATRNILVENENRVKIGDF 164

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           + L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 16  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 76  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 131
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++   R IH DL   NIL+ +   VK+ D+
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDF 161

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           + L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 18  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 78  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 133
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++   R IH DL   NIL+ +   VK+ D+
Sbjct: 134 YLGTKRYIHRDLATRNILVENENRVKIGDF 163

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 28  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 86
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H
Sbjct: 87  PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 144
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+L+    Y++V D+
Sbjct: 145 SLDLIYRDLKPENLLIDQQGYIQVTDF 171

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHD 149
           +  L  +G+GTFG+V+   +       A+KI++   I    E A  + E  VLQ  +RH 
Sbjct: 12  FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHP 70
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                   ++  F   + +C V E   G  L+  L +   R F  D  R  G +++ ++ 
Sbjct: 71  F----LTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALD 124
Query: 209 FMH-ELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++H E  +++ DLK EN++L    ++K+ D+
Sbjct: 125 YLHSEKNVVYRDLKLENLMLDKDGHIKITDF 155

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 101
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 159
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+L+    Y++V D+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDF 186

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           + L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 31  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 91  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 146
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++   R IH DL   NIL+ +   VK+ D+
Sbjct: 147 YLGTKRYIHRDLATRNILVENENRVKIGDF 176

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/152 (22%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           L  +G+GTFG+V+   +       A+KI+R           E+ + +    H +  +R +
Sbjct: 15  LKLLGKGTFGKVILVREKATGRYYAMKILRK----------EVIIAKDEVAHTVTESRVL 64
Query: 157 Q---------IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           Q         ++  F   + +C V E   G  L+  L +   R F  +  R  G +++ +
Sbjct: 65  QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSA 122
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           + ++H   +++ D+K EN++L    ++K+ D+
Sbjct: 123 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDF 154

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           + L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 20  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 80  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 135
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++   R IH DL   NIL+ +   VK+ D+
Sbjct: 136 YLGTKRYIHRDLATRNILVENENRVKIGDF 165

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           + L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 73  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 128
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++   R IH DL   NIL+ +   VK+ D+
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDF 158

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 28/159 (17%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARHDIGG 152
           +G G FG+VVE   F   K++ V   A+K+++S      +EA M E+ ++  L +H+   
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 110
Query: 153 TRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGR---------- 201
              V +     +   + ++ E      L +FLR    R    DL +E GR          
Sbjct: 111 -NIVNLLGACTHGGPVLVITEYCCYGDLLNFLR----RKAEADLDKEDGRPLELRDLLHF 165
Query: 202 --QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
             Q+ + +AF+     IH D+   N+LL +    K+ D+
Sbjct: 166 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDF 204

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    +
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 74
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+         I IV E +   SL DFL+    +   +  + ++  Q+   +A++  +
Sbjct: 75  LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKV 240
             +H DL   NIL+      KV D+ +
Sbjct: 134 NYVHRDLAAANILVGENLVCKVADFGL 160

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 101
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 159
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+L+    Y++V D+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDF 186

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 25/185 (13%)
Query: 67  RTGSPPWRPDDKDGHYVFAIGENLTPRYRI-------LSKMGEGTFGQVVECFDNEKKEL 119
           R+GSP      ++     A      P++R+       L  +G+GTFG+V+   +      
Sbjct: 124 RSGSPSDNSGAEEMEVSLA-----KPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRY 178
Query: 120 VAIKIVRS--INKYREAA--MIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL 175
            A+KI++   I    E A  + E  VLQ  +RH         ++  F   + +C V E  
Sbjct: 179 YAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPF----LTALKYSFQTHDRLCFVMEYA 233
Query: 176 -GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAEYV 233
            G  L+  L +   R F  D  R  G +++ ++ ++H E  +++ DLK EN++L    ++
Sbjct: 234 NGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHI 291
Query: 234 KVPDY 238
           K+ D+
Sbjct: 292 KITDF 296

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHD 149
           +  L  +G+GTFG+V+   +       A+KI++   I    E A  + E  VLQ  +RH 
Sbjct: 11  FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHP 69
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                   ++  F   + +C V E   G  L+  L +   R F  D  R  G +++ ++ 
Sbjct: 70  F----LTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALD 123
Query: 209 FMH-ELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++H E  +++ DLK EN++L    ++K+ D+
Sbjct: 124 YLHSEKNVVYRDLKLENLMLDKDGHIKITDF 154

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+L+    Y++V D+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDF 185

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           + L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 31  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 91  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 146
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++   R IH DL   NIL+ +   VK+ D+
Sbjct: 147 YLGTKRYIHRDLATRNILVENENRVKIGDF 176

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAA--MIEIDVLQRLARHD 149
           +  L  +G+GTFG+V+   +       A+KI++   I    E A  + E  VLQ  +RH 
Sbjct: 10  FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHP 68
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                   ++  F   + +C V E   G  L+  L +   R F  D  R  G +++ ++ 
Sbjct: 69  F----LTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALD 122
Query: 209 FMH-ELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++H E  +++ DLK EN++L    ++K+ D+
Sbjct: 123 YLHSEKNVVYRDLKLENLMLDKDGHIKITDF 153

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+L+    Y++V D+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDF 185

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           + L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 73  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 128
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++   R IH DL   NIL+ +   VK+ D+
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDF 158

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           + L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 11  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 71  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 126
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++   R IH DL   NIL+ +   VK+ D+
Sbjct: 127 YLGTKRYIHRDLATRNILVENENRVKIGDF 156

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+L+    Y++V D+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDF 185

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/152 (22%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           L  +G+GTFG+V+   +       A+KI+R           E+ + +    H +  +R +
Sbjct: 10  LKLLGKGTFGKVILVREKATGRYYAMKILRK----------EVIIAKDEVAHTVTESRVL 59
Query: 157 Q---------IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           Q         ++  F   + +C V E   G  L+  L +   R F  +  R  G +++ +
Sbjct: 60  QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSA 117
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           + ++H   +++ D+K EN++L    ++K+ D+
Sbjct: 118 LEYLHSRDVVYRDIKLENLMLDKDGHIKITDF 149

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           + L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 73  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 128
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++   R IH DL   NIL+ +   VK+ D+
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDF 158

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           + L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 12  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 72  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 127
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++   R IH DL   NIL+ +   VK+ D+
Sbjct: 128 YLGTKRYIHRDLATRNILVENENRVKIGDF 157

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           + L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 17  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 77  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 132
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++   R IH DL   NIL+ +   VK+ D+
Sbjct: 133 YLGTKRYIHRDLATRNILVENENRVKIGDF 162

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 20/164 (12%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 71  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 123
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY----KVPSPRHA 246
           +++ H  R+IH D+KPEN+LL SA  +K+ D+      PS R A
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA 167

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
Query: 98  SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE---AAMIEIDVLQRLARHDIGGTR 154
           +++G G+FG V   +  +    VA+KI++ ++   E   A   E+ VL++        TR
Sbjct: 42  TRIGSGSFGTV---YKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRK--------TR 90
Query: 155 CVQIRNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
            V I  +  Y  ++++ IV +   G SLY  L     + F +  + ++ RQ  + + ++H
Sbjct: 91  HVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQGMDYLH 149
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS 248
              +IH D+K  NI L     VK+ D+ + + +  +S
Sbjct: 150 AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS 186

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    +
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 74
Query: 155 CVQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+         I IV E +    L DFL+    +   +  + ++  Q+   +A++  +
Sbjct: 75  LVQLYAVVS-EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKV 240
             +H DL+  NIL+      KV D+ +
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGL 160

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+L+    Y++V D+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDF 185

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV----RSINKYREAAMIEIDVLQRLARHDIGG 152
           L ++G G+FG V    D    E+VAIK +    +  N+  +  + E+  LQ+L RH    
Sbjct: 59  LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RH---- 113
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
              +Q R  +   +   +V E    S  D L  +      +++   +    L+ +A++H 
Sbjct: 114 PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-AVTHGALQGLAYLHS 172
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
             +IH D+K  NILL     VK+ D+   S
Sbjct: 173 HNMIHRDVKAGNILLSEPGLVKLGDFGSAS 202

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 8/147 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V++++ RH+    +
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKI-RHE----K 74
Query: 155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+         I IV E +   SL DFL+    +   +  + ++  Q+   +A++  +
Sbjct: 75  LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKV 240
             +H DL+  NIL+      KV D+ +
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGL 160

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/186 (21%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 66  PRTGSPPWRPDDKDGHYVFAIG--------ENLTPRYRILSKMGEGTFGQVVECFDNEKK 117
           P+T S P  P D D     +IG        ++L P    + ++G G +G V +       
Sbjct: 23  PQTSSTP--PRDLDSKACISIGNQNFEVKADDLEP----IMELGRGAYGVVEKMRHVPSG 76
Query: 118 ELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP 177
           +++A+K +R+    +E   + +D+   ++   +     V           + I  E +  
Sbjct: 77  QIMAVKRIRATVNSQEQKRLLMDL--DISMRTVDCPFTVTFYGALFREGDVWICMELMDT 134
Query: 178 SLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAEYVK 234
           SL  F ++  +  ++ P D++ ++   +++++  +H +L +IH D+KP N+L+ +   VK
Sbjct: 135 SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVK 194
Query: 235 VPDYKV 240
           + D+ +
Sbjct: 195 MCDFGI 200

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 14/145 (9%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA----MIEIDVLQRLARHDIGGTRC 155
           +G+G FG V    + + K ++A+K++      +E        EI++   L   +I     
Sbjct: 23  LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNI----- 77
Query: 156 VQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
           +++ N+F  R  I ++ E   P   LY  L+K+    F          +L +++ + HE 
Sbjct: 78  LRMYNYFHDRKRIYLMLE-FAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHER 134
Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
           ++IH D+KPEN+L+     +K+ D+
Sbjct: 135 KVIHRDIKPENLLMGYKGELKIADF 159

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    S P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           I+ DLKPEN+++    Y++V D+
Sbjct: 163 IYRDLKPENLIIDQQGYIQVTDF 185

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E   G  ++  LR+    S P    R    Q++ +  ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+++    Y+KV D+
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDF 185

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+    + P    R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP--HARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           I+ DLKPEN+L+    Y++V D+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDF 185

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 20/164 (12%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 68  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 120
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY----KVPSPRHA 246
           +++ H  R+IH D+KPEN+LL SA  +K+ D+      PS R A
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA 164

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 19/156 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   +D +    +A+K        I+ +   YRE  ++      +
Sbjct: 52  RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLL------K 105
Query: 145 LARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
             +H+  IG           +  N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 106 HMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 162
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +L  + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 163 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 198

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 22/156 (14%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI   ++K +   + +I+       H +  
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKQIE-------HTLNE 92
Query: 153 TRCVQIRNW---------FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQ 202
            R +Q  N+         F   +++ +V E   G  ++  LR+    S P    R    Q
Sbjct: 93  KRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQ 150
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++ +  ++H L LI+ DLKPEN+++    Y+KV D+
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDF 186

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 19/143 (13%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENI 225
           +L  + ++H   +IH DLKP N+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL 156

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 12/151 (7%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDV-LQRLARHDIG 151
           Y++  ++G+G F  V  C      +  A KI+ +     R+   +E +  + RL +H   
Sbjct: 24  YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKH--- 80
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               V++ +      H  ++F+ + G  L++ +    Y S   D    + +Q+LE+V   
Sbjct: 81  -PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS-EADASHCI-QQILEAVLHC 137
Query: 211 HELRLIHTDLKPENILLVS---AEYVKVPDY 238
           H++ ++H DLKPEN+LL S      VK+ D+
Sbjct: 138 HQMGVVHRDLKPENLLLASKLKGAAVKLADF 168

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 22/156 (14%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI   ++K +   + +I+       H +  
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKQIE-------HTLNE 92
Query: 153 TRCVQIRNW---------FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQ 202
            R +Q  N+         F   +++ +V E   G  ++  LR+    S P    R    Q
Sbjct: 93  KRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQ 150
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++ +  ++H L LI+ DLKPEN+++    Y+KV D+
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDF 186

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIV----RSINKYREAAMIEIDVLQRLARHDIGG 152
           L ++G G+FG V    D    E+VAIK +    +  N+  +  + E+  LQ+L RH    
Sbjct: 20  LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RH---- 74
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
              +Q R  +   +   +V E    S  D L  +      +++   +    L+ +A++H 
Sbjct: 75  PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-AVTHGALQGLAYLHS 133
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
             +IH D+K  NILL     VK+ D+   S
Sbjct: 134 HNMIHRDVKAGNILLSEPGLVKLGDFGSAS 163

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 19/143 (13%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENI 225
           +L  + ++H   +IH DLKP N+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL 156

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 19/143 (13%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENI 225
           +L  + ++H   +IH DLKP N+
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNL 156

>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 18/153 (11%)
Query: 85  AIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR 144
           A+    T  +  L K+G G FG V +C       + AIK  RS  K    ++ E + L+ 
Sbjct: 2   AMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALRE 58
Query: 145 LARHDIGGTRCVQIRNWFDYR--NHICIVFEKL-GPSLYDFLRKNSYRSFPI-------D 194
           +  H + G     +R +  +   +H+ I  E   G SL D + +N YR           D
Sbjct: 59  VYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKD 117
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILL 227
           L+ ++GR L     ++H + L+H D+KP NI +
Sbjct: 118 LLLQVGRGL----RYIHSMSLVHMDIKPSNIFI 146

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 19/155 (12%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           RY+ LS +G G +G V   FD +    VA+K        I+ +   YRE     + +L+ 
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-----LRLLKH 77
Query: 145 LARHDIGGTRCV--QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           +   ++ G   V    R+  ++ N + +V   +G  L + ++    +    D V+ L  Q
Sbjct: 78  MKHENVIGLLDVFTPARSLEEF-NDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           +L  + ++H   +IH DLKP N+ +     +K+ D
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 168

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 88/182 (48%), Gaps = 20/182 (10%)
Query: 81  HYVFAIGENLTP-RYRILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSIN---KYRE 133
           H+V    E   P ++ +L  +G+G+FG+V    +   ++ ++L A+K+++      + R 
Sbjct: 12  HHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV 71
Query: 134 AAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFP 192
              +E D+L      ++     V++   F     + ++ + L G  L+  L K     F 
Sbjct: 72  RTKMERDILV-----EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FT 124
Query: 193 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY-----KVPSPRHAF 247
            + V+    +L  ++  +H L +I+ DLKPENILL    ++K+ D+      +   + A+
Sbjct: 125 EEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY 184
Query: 248 SF 249
           SF
Sbjct: 185 SF 186

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
           + ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+   
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V 
Sbjct: 66  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 119
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           ++H + + H D+KPEN+LL   + +K+ D+ + +
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLAT 153

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 22/156 (14%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI   ++K +   + EI+       H +  
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKEIE-------HTLNE 91
Query: 153 TRCVQIRNW---------FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQ 202
            R +Q  N+         F   +++ +V E   G  ++  LR+    S P    R    Q
Sbjct: 92  KRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQ 149
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++ +  ++H L LI+ DLKPEN+++    Y++V D+
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDF 185

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 35  QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 93
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E + G  ++  LR+     F     R    Q++ +  ++H
Sbjct: 94  PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH 151
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+L+    Y++V D+
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDF 178

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    +
Sbjct: 21  RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 74
Query: 155 CVQIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            VQ+         I IV E +    L DFL+    +   +  + ++  Q+   +A++  +
Sbjct: 75  LVQLYAVVS-EEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKV 240
             +H DL+  NIL+      KV D+ +
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGL 160

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 4/143 (2%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 67  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 125
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+     F     R    Q++ +  ++H L L
Sbjct: 126 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSLDL 183
Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           I+ DLKPEN+L+    Y++V D+
Sbjct: 184 IYRDLKPENLLIDQQGYIQVTDF 206

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 88/182 (48%), Gaps = 20/182 (10%)
Query: 81  HYVFAIGENLTP-RYRILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSIN---KYRE 133
           H+V    E   P ++ +L  +G+G+FG+V    +   ++ ++L A+K+++      + R 
Sbjct: 12  HHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV 71
Query: 134 AAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFP 192
              +E D+L      ++     V++   F     + ++ + L G  L+  L K     F 
Sbjct: 72  RTKMERDILV-----EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FT 124
Query: 193 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY-----KVPSPRHAF 247
            + V+    +L  ++  +H L +I+ DLKPENILL    ++K+ D+      +   + A+
Sbjct: 125 EEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY 184
Query: 248 SF 249
           SF
Sbjct: 185 SF 186

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
           + ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+   
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 118
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           ++H + + H D+KPEN+LL   + +K+ D+ + +
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLAT 152

>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 18/147 (12%)
Query: 91  TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI 150
           T  +  L K+G G FG V +C       + AIK  RS  K    ++ E + L+ +  H +
Sbjct: 10  TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALREVYAHAV 66
Query: 151 GGTRCVQIRNWFDYR--NHICIVFEKL-GPSLYDFLRKNSYRSFPI-------DLVRELG 200
            G     +R +  +   +H+ I  E   G SL D + +N YR           DL+ ++G
Sbjct: 67  LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLLQVG 125
Query: 201 RQLLESVAFMHELRLIHTDLKPENILL 227
           R L     ++H + L+H D+KP NI +
Sbjct: 126 RGL----RYIHSMSLVHMDIKPSNIFI 148

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 88/182 (48%), Gaps = 20/182 (10%)
Query: 81  HYVFAIGENLTP-RYRILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRSIN---KYRE 133
           H+V    E   P ++ +L  +G+G+FG+V    +   ++ ++L A+K+++      + R 
Sbjct: 13  HHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV 72
Query: 134 AAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFP 192
              +E D+L      ++     V++   F     + ++ + L G  L+  L K     F 
Sbjct: 73  RTKMERDILV-----EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FT 125
Query: 193 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY-----KVPSPRHAF 247
            + V+    +L  ++  +H L +I+ DLKPENILL    ++K+ D+      +   + A+
Sbjct: 126 EEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY 185
Query: 248 SF 249
           SF
Sbjct: 186 SF 187

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 12/161 (7%)
Query: 84  FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDV- 141
            A     T  Y++  ++G+G F  V  C      +  A KI+ +     R+   +E +  
Sbjct: 23  MATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREAR 82
Query: 142 LQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELG 200
           + RL +H       V++ +         +VF+ + G  L++ +    Y S   D    + 
Sbjct: 83  ICRLLKH----PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-EADASHCI- 136
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVS---AEYVKVPDY 238
            Q+LESV  +H+  ++H DLKPEN+LL S      VK+ D+
Sbjct: 137 HQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADF 177

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 4/143 (2%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+     F     R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           I+ DLKPEN+L+    Y++V D+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDF 185

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 4/143 (2%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+     F     R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           I+ DLKPEN+L+    Y++V D+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDF 185

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 20/162 (12%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + ++K ++A+K++       E A +E  +     +Q   RH
Sbjct: 7   FEIGRPLGKGKFGNVYLAREKQRKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 64
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 65  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 117
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY----KVPSPR 244
           +++ H  R+IH D+KPEN+LL SA  +K+ D+      PS R
Sbjct: 118 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 159

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 4/143 (2%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 104
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+     F     R    Q++ +  ++H L L
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           I+ DLKPEN+L+    Y++V D+
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDF 185

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 18/156 (11%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
           + ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI + + L   ++
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNHENV 67
Query: 151 ----GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
               G  R   I+  F        +F+++ P +            P    +    QL+  
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI----------GMPEPDAQRFFHQLMAG 117
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           V ++H + + H D+KPEN+LL   + +K+ D+ + +
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT 153

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 40/174 (22%)
Query: 85  AIGENLTP---RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEID- 140
           A+G +  P    YR+L  +G+G F +V              K+ R I   RE A+  ID 
Sbjct: 2   AMGSDEQPHIGNYRLLKTIGKGNFAKV--------------KLARHILTGREVAIKIIDK 47
Query: 141 ------VLQRLARHDIGGTRCVQIRNW---------FDYRNHICIVFE-KLGPSLYDFLR 184
                  LQ+L R      R ++I N           +    + ++ E   G  ++D+L 
Sbjct: 48  TQLNPTSLQKLFRE----VRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLV 103
Query: 185 KNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
             ++        R   RQ++ +V + H+ R++H DLK EN+LL +   +K+ D+
Sbjct: 104 --AHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADF 155

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
           + ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+   
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V 
Sbjct: 66  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 119
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           ++H + + H D+KPEN+LL   + +K+ D+ + +
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLAT 153

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
           + ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+   
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V 
Sbjct: 66  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 119
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           ++H + + H D+KPEN+LL   + +K+ D+ + +
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLAT 153

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
           + ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+   
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V 
Sbjct: 66  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 119
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           ++H + + H D+KPEN+LL   + +K+ D+ + +
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLAT 153

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 16/155 (10%)
Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARHD 149
           + +S++G+G FG V  C      +    LVA+K ++     ++     EI +L+ L    
Sbjct: 14  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 73
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPS--LYDFLRKNSYRSFPIDLVREL--GRQLLE 205
           I   R V   ++   R  + +V E L PS  L DFL+++  R   +D  R L    Q+ +
Sbjct: 74  IVKYRGV---SYGPGRQSLRLVMEYL-PSGCLRDFLQRHRAR---LDASRLLLYSSQICK 126
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
            + ++   R +H DL   NIL+ S  +VK+ D+ +
Sbjct: 127 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGL 161

>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 18/147 (12%)
Query: 91  TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI 150
           T  +  L K+G G FG V +C       + AIK  RS  K    ++ E + L+ +  H +
Sbjct: 8   TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALREVYAHAV 64
Query: 151 GGTRCVQIRNWFDYR--NHICIVFEKL-GPSLYDFLRKNSYRSFPI-------DLVRELG 200
            G     +R +  +   +H+ I  E   G SL D + +N YR           DL+ ++G
Sbjct: 65  LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLLQVG 123
Query: 201 RQLLESVAFMHELRLIHTDLKPENILL 227
           R L     ++H + L+H D+KP NI +
Sbjct: 124 RGL----RYIHSMSLVHMDIKPSNIFI 146

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
           + L  +Y I   +G G FG V  C +   K+    K V+     +     EI +L  +AR
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILN-IAR 59
Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           H       + +   F+    + ++FE + G  +++ +  +++     ++V  +  Q+ E+
Sbjct: 60  H----RNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYV-HQVCEA 114
Query: 207 VAFMHELRLIHTDLKPENIL 226
           + F+H   + H D++PENI+
Sbjct: 115 LQFLHSHNIGHFDIRPENII 134

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 18/156 (11%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
           + ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI + + L   ++
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNHENV 66
Query: 151 ----GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
               G  R   I+  F        +F+++ P +            P    +    QL+  
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI----------GMPEPDAQRFFHQLMAG 116
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           V ++H + + H D+KPEN+LL   + +K+ D+ + +
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT 152

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 4/143 (2%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +     V
Sbjct: 41  IKTLGTGSFGRVMLVKHKESGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNFPFLV 99
Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F   +++ +V E + G  ++  LR+     F     R    Q++ +  ++H L L
Sbjct: 100 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLHSLDL 157
Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           I+ DLKPEN+L+    Y++V D+
Sbjct: 158 IYRDLKPENLLIDQQGYIQVTDF 180

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 18/156 (11%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
           + ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI + + L   ++
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKMLNHENV 66
Query: 151 ----GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
               G  R   I+  F        +F+++ P +            P    +    QL+  
Sbjct: 67  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI----------GMPEPDAQRFFHQLMAG 116
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           V ++H + + H D+KPEN+LL   + +K+ D+ + +
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT 152

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 16/155 (10%)
Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARHD 149
           + +S++G+G FG V  C      +    LVA+K ++     ++     EI +L+ L    
Sbjct: 13  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 72
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPS--LYDFLRKNSYRSFPIDLVREL--GRQLLE 205
           I   R V   ++   R  + +V E L PS  L DFL+++  R   +D  R L    Q+ +
Sbjct: 73  IVKYRGV---SYGPGRQSLRLVMEYL-PSGCLRDFLQRHRAR---LDASRLLLYSSQICK 125
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
            + ++   R +H DL   NIL+ S  +VK+ D+ +
Sbjct: 126 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGL 160

>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 18/147 (12%)
Query: 91  TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI 150
           T  +  L K+G G FG V +C       + AIK  RS  K    ++ E + L+ +  H +
Sbjct: 6   TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALREVYAHAV 62
Query: 151 GGTRCVQIRNWFDYR--NHICIVFEKL-GPSLYDFLRKNSYRSFPI-------DLVRELG 200
            G     +R +  +   +H+ I  E   G SL D + +N YR           DL+ ++G
Sbjct: 63  LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLLQVG 121
Query: 201 RQLLESVAFMHELRLIHTDLKPENILL 227
           R L     ++H + L+H D+KP NI +
Sbjct: 122 RGL----RYIHSMSLVHMDIKPSNIFI 144

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 26/167 (15%)
Query: 78  KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI 137
           K GHY+  +G+ L          G GTFG+V           VA+KI+    K R   ++
Sbjct: 14  KIGHYI--LGDTL----------GVGTFGKVKVGKHELTGHKVAVKILNR-QKIRSLDVV 60
Query: 138 -----EIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSF 191
                EI  L +L RH       +++       + I +V E + G  L+D++ KN     
Sbjct: 61  GKIRREIQNL-KLFRH----PHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG--RL 113
Query: 192 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
                R L +Q+L  V + H   ++H DLKPEN+LL +    K+ D+
Sbjct: 114 DEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADF 160

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 16/155 (10%)
Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARHD 149
           + +S++G+G FG V  C      +    LVA+K ++     ++     EI +L+ L    
Sbjct: 26  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 85
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPS--LYDFLRKNSYRSFPIDLVREL--GRQLLE 205
           I   R V   ++   R  + +V E L PS  L DFL+++  R   +D  R L    Q+ +
Sbjct: 86  IVKYRGV---SYGPGRQSLRLVMEYL-PSGCLRDFLQRHRAR---LDASRLLLYSSQICK 138
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
            + ++   R +H DL   NIL+ S  +VK+ D+ +
Sbjct: 139 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGL 173

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 68  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 120
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +++ H  R+IH D+KPEN+LL SA  +K+ D+
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF 152

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 36  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 94  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 146
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +++ H  R+IH D+KPEN+LL SA  +K+ D+
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF 178

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           + ++G G FG +V       K+ VAIK +R      E  + E +V+ +L+       + V
Sbjct: 12  VQEIGSGQFG-LVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH-----PKLV 65
Query: 157 QIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           Q+      +  IC+VFE +    L D+LR      F  + +  +   + E +A++ E  +
Sbjct: 66  QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEASV 124
Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           IH DL   N L+   + +KV D+
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDF 147

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 36  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 93
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 94  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 146
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +++ H  R+IH D+KPEN+LL SA  +K+ D+
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF 178

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 73  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 125
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY----KVPSPR 244
           +++ H  R+IH D+KPEN+LL SA  +K+ D+      PS R
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 167

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 14  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 71
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 72  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 124
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY----KVPSPR 244
           +++ H  R+IH D+KPEN+LL SA  +K+ D+      PS R
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 166

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 71  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 123
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +++ H  R+IH D+KPEN+LL SA  +K+ D+
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF 155

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 11  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 69  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 121
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +++ H  R+IH D+KPEN+LL SA  +K+ D+
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF 153

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 68  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 120
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +++ H  R+IH D+KPEN+LL SA  +K+ D+
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF 152

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 68  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 120
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +++ H  R+IH D+KPEN+LL SA  +K+ D+
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF 152

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 73  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 125
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY----KVPSPR 244
           +++ H  R+IH D+KPEN+LL SA  +K+ D+      PS R
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 167

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           + L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 16  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+ ++ R   I L+ +   Q+ + + 
Sbjct: 76  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLL-QYTSQICKGME 131
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++   R IH DL   NIL+ +   VK+ D+
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDF 161

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
           + ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+   
Sbjct: 7   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 63
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V 
Sbjct: 64  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 117
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           ++H + + H D+KPEN+LL   + +K+ D+ + +
Sbjct: 118 YLHGIGITHRDIKPENLLLDERDNLKISDFGLAT 151

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           + L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 14  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL D+L+K+  R   I L+ +   Q+ + + 
Sbjct: 74  IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 129
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++   R IH +L   NIL+ +   VK+ D+
Sbjct: 130 YLGTKRYIHRNLATRNILVENENRVKIGDF 159

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 73  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 125
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY----KVPSPR 244
           +++ H  R+IH D+KPEN+LL SA  +K+ D+      PS R
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 167

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           L  EL  Q+ + V ++H  +LIH DLKP NI LV  + VK+ D+
Sbjct: 137 LALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDF 180

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 68  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 120
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +++ H  R+IH D+KPEN+LL SA  +K+ D+
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF 152

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
           + ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+   
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V 
Sbjct: 66  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 119
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           ++H + + H D+KPEN+LL   + +K+ D+ + +
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLAT 153

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E   G  ++  LR+    S P    R    Q++ +  ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+++    Y++V D+
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDF 185

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
           + ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+   
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 118
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           ++H + + H D+KPEN+LL   + +K+ D+ + +
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLAT 152

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 9   FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 66
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 67  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 119
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +++ H  R+IH D+KPEN+LL SA  +K+ D+
Sbjct: 120 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF 151

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 11  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 69  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 121
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +++ H  R+IH D+KPEN+LL SA  +K+ D+
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF 153

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 11  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 69  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 121
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +++ H  R+IH D+KPEN+LL SA  +K+ D+
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF 153

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
           + ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+   
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 118
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           ++H + + H D+KPEN+LL   + +K+ D+ + +
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLAT 152

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E + G  ++  LR+     F     R    Q++ +  ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+L+    Y++V D+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDF 185

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 68  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 120
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY----KVPSPR 244
           +++ H  R+IH D+KPEN+LL SA  +K+ D+      PS R
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 162

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 101
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E + G  ++  LR+     F     R    Q++ +  ++H
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH 159
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+L+    Y++V D+
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDF 186

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           + I+  +G G FG+V        + + A+KI   +NK+      E     R  R  +   
Sbjct: 92  FEIIKVIGRGAFGEVAVVKMKNTERIYAMKI---LNKWEMLKRAETACF-REERDVLVNG 147
Query: 154 RCVQIRNW---FDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
            C  I      F   NH+ +V +  +G  L   L K   +  P D+ R    +++ ++  
Sbjct: 148 DCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDS 206
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +H+L  +H D+KP+N+LL    ++++ D+
Sbjct: 207 IHQLHYVHRDIKPDNVLLDVNGHIRLADF 235

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 12  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 70  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 122
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +++ H  R+IH D+KPEN+LL SA  +K+ D+
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF 154

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 71  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 123
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY----KVPSPR 244
           +++ H  R+IH D+KPEN+LL SA  +K+ D+      PS R
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 165

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
           + ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+   
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 118
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           ++H + + H D+KPEN+LL   + +K+ D+ + +
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLAT 152

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
           + ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+   
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 118
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           ++H + + H D+KPEN+LL   + +K+ D+ + +
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLAT 152

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
           + ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+   
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V 
Sbjct: 66  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 119
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           ++H + + H D+KPEN+LL   + +K+ D+ + +
Sbjct: 120 YLHGIGITHRDIKPENLLLDERDNLKISDFGLAT 153

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 24/195 (12%)
Query: 63  GAIPRTGSPPWRPDDKDGHY---VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKEL 119
           G +PR      R   K G Y   V      L   Y   + +G G +G V    D    E 
Sbjct: 13  GLVPRGSMSLIR---KKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEK 69
Query: 120 VAIK-IVRSINK--YREAAMIEIDVLQRLARHDIGG-----TRCVQIRNWFDYRNHICIV 171
           VAIK + R      + + A  E+ +L+ +   ++ G     T    +RN++D        
Sbjct: 70  VAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD-------- 121
Query: 172 FEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE 231
           F  + P +   L+K     F  + ++ L  Q+L+ + ++H   ++H DLKP N+ +    
Sbjct: 122 FYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDC 181
Query: 232 YVKVPDYKVPSPRHA 246
            +K+ D+ +   RHA
Sbjct: 182 ELKILDFGL--ARHA 194

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
           + ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+   
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 118
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           ++H + + H D+KPEN+LL   + +K+ D+ + +
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLAT 152

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
           + ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+   
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 118
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           ++H + + H D+KPEN+LL   + +K+ D+ + +
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLAT 152

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 68  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 120
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +++ H  R+IH D+KPEN+LL SA  +K+ D+
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF 152

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E + G  ++  LR+     F     R    Q++ +  ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+L+    Y++V D+
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDF 185

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 9/149 (6%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           + I+  +G G FG+V        + + A+KI   +NK+      E     R  R  +   
Sbjct: 76  FEIIKVIGRGAFGEVAVVKMKNTERIYAMKI---LNKWEMLKRAETACF-REERDVLVNG 131
Query: 154 RCVQIRNW---FDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
            C  I      F   NH+ +V +  +G  L   L K   +  P D+ R    +++ ++  
Sbjct: 132 DCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDS 190
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +H+L  +H D+KP+N+LL    ++++ D+
Sbjct: 191 IHQLHYVHRDIKPDNVLLDVNGHIRLADF 219

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/160 (22%), Positives = 74/160 (46%), Gaps = 8/160 (5%)
Query: 84  FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEID 140
           F +  ++   Y I+  +G G +G V         + VAIK + +   +    +  + E+ 
Sbjct: 47  FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 106
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYR--NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE 198
           +L+     +I   + + +R    Y     + +V + +   L+  +  +S +   ++ VR 
Sbjct: 107 ILKHFKHDNIIAIKDI-LRPTVPYGEFKSVYVVLDLMESDLHQII--HSSQPLTLEHVRY 163
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
              QLL  + +MH  ++IH DLKP N+L+     +K+ D+
Sbjct: 164 FLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDF 203

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
           + ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+   
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 118
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           ++H + + H D+KPEN+LL   + +K+ D+ + +
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLAT 152

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 71  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 123
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY----KVPSPR 244
           +++ H  R+IH D+KPEN+LL SA  +K+ D+      PS R
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 165

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 27  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 84
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 85  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 137
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +++ H  R+IH D+KPEN+LL SA  +K+ D+
Sbjct: 138 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF 169

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 71  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 123
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY----KVPSPR 244
           +++ H  R+IH D+KPEN+LL SA  +K+ D+      PS R
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 165

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
           + ++  +GEG +G+V    +   +E VA+KIV           I+ ++ + ++  H+   
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 118
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           ++H + + H D+KPEN+LL   + +K+ D+ + +
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLAT 152

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 29/158 (18%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEID-------VLQRLA 146
           YR+L  +G+G F +V              K+ R I   RE A+  ID        LQ+L 
Sbjct: 17  YRLLKTIGKGNFAKV--------------KLARHILTGREVAIKIIDKTQLNPTSLQKLF 62
Query: 147 RHD-----IGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELG 200
           R       +     V++    +    + ++ E   G  ++D+L   ++        R   
Sbjct: 63  REVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLV--AHGRMKEKEARSKF 120
Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           RQ++ +V + H+ R++H DLK EN+LL +   +K+ D+
Sbjct: 121 RQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADF 158

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI+    K  +   IE  + ++     +  
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK-QKVVKLKQIEHTLNEKRILQAVNF 100
Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              V++   F   +++ +V E   G  ++  LR+     F     R    Q++ +  ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH 158
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
            L LI+ DLKPEN+++    Y+KV D+
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDF 185

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 20/164 (12%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    +   K ++A+K++       E A +E  +     +Q   RH
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKNSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 67
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 68  ----PNILRLYGYFHDSTRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 120
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY----KVPSPRHA 246
           +++ H  ++IH D+KPEN+LL SA  +K+ D+      PS R A
Sbjct: 121 LSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA 164

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/160 (22%), Positives = 74/160 (46%), Gaps = 8/160 (5%)
Query: 84  FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEID 140
           F +  ++   Y I+  +G G +G V         + VAIK + +   +    +  + E+ 
Sbjct: 46  FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 105
Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRN--HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE 198
           +L+     +I   + + +R    Y     + +V + +   L+  +  +S +   ++ VR 
Sbjct: 106 ILKHFKHDNIIAIKDI-LRPTVPYGEFKSVYVVLDLMESDLHQII--HSSQPLTLEHVRY 162
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
              QLL  + +MH  ++IH DLKP N+L+     +K+ D+
Sbjct: 163 FLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDF 202

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           Y +   +G G++ +   C         A+K+   I+K +     EI++L R  +H     
Sbjct: 29  YVVKETIGVGSYSECKRCVHKATNMEYAVKV---IDKSKRDPSEEIEILLRYGQH----P 81
Query: 154 RCVQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLV-RELGRQLLESVAFM 210
             + +++ +D   H+ +V E +  G  L   LR+  +       V   +G+    +V ++
Sbjct: 82  NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGK----TVEYL 137
Query: 211 HELRLIHTDLKPENILLV 228
           H   ++H DLKP NIL V
Sbjct: 138 HSQGVVHRDLKPSNILYV 155

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           Y +   +G G++ +   C         A+K+   I+K +     EI++L R  +H     
Sbjct: 29  YVVKETIGVGSYSECKRCVHKATNMEYAVKV---IDKSKRDPSEEIEILLRYGQH----P 81
Query: 154 RCVQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLV-RELGRQLLESVAFM 210
             + +++ +D   H+ +V E +  G  L   LR+  +       V   +G+    +V ++
Sbjct: 82  NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGK----TVEYL 137
Query: 211 HELRLIHTDLKPENILLV 228
           H   ++H DLKP NIL V
Sbjct: 138 HSQGVVHRDLKPSNILYV 155

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           +Y    K+G+G  G V    D    + VAI+ +    + ++  +I   ++ R  ++    
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP--- 77
Query: 153 TRCVQIRNWFD---YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                I N+ D     + + +V E L G SL D + +       I  V    R+ L+++ 
Sbjct: 78  ----NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALE 130
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           F+H  ++IH D+K +NILL     VK+ D+
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDF 160

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 16/155 (10%)
Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           + +S++G+G FG V  C      +    LVA+K ++ S    +     EI +L+ L    
Sbjct: 10  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 69
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPS--LYDFLRKNSYRSFPIDLVREL--GRQLLE 205
           I   R V   ++   R  + +V E L PS  L DFL+++  R   +D  R L    Q+ +
Sbjct: 70  IVKYRGV---SYGPGRPELRLVMEYL-PSGCLRDFLQRHRAR---LDASRLLLYSSQICK 122
Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
            + ++   R +H DL   NIL+ S  +VK+ D+ +
Sbjct: 123 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGL 157

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           +Y    K+G+G  G V    D    + VAI+ +    + ++  +I   ++ R  ++    
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP--- 77
Query: 153 TRCVQIRNWFD---YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                I N+ D     + + +V E L G SL D + +       I  V    R+ L+++ 
Sbjct: 78  ----NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALE 130
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           F+H  ++IH D+K +NILL     VK+ D+
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDF 160

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           + ++G G FG +V       K+ VAIK +R      E  + E +V+ +L+       + V
Sbjct: 12  VQEIGSGQFG-LVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH-----PKLV 65
Query: 157 QIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           Q+      +  IC+VFE +    L D+LR      F  + +  +   + E +A++ E  +
Sbjct: 66  QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACV 124
Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           IH DL   N L+   + +KV D+
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDF 147

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           + ++G G FG +V       K+ VAIK +R      E  + E +V+ +L+       + V
Sbjct: 15  VQEIGSGQFG-LVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH-----PKLV 68
Query: 157 QIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           Q+      +  IC+VFE +    L D+LR      F  + +  +   + E +A++ E  +
Sbjct: 69  QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACV 127
Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           IH DL   N L+   + +KV D+
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDF 150

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 22/156 (14%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           ++  +  +G G+FG+V+     E     A+KI   ++K +   + +I+       H +  
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKI---LDKQKVVKLKQIE-------HTLNE 92
Query: 153 TRCVQIRNW---------FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQ 202
            R +Q  N+         F   +++ +V E   G  ++  LR+     F     R    Q
Sbjct: 93  KRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFXEPHARFYAAQ 150
Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++ +  ++H L LI+ DLKPEN+++    Y+KV D+
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDF 186

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           +Y    K+G+G  G V    D    + VAI+ +    + ++  +I   ++ R  ++    
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP--- 77
Query: 153 TRCVQIRNWFD---YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                I N+ D     + + +V E L G SL D + +       I  V    R+ L+++ 
Sbjct: 78  ----NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALE 130
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           F+H  ++IH D+K +NILL     VK+ D+
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDF 160

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 31  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 82
Query: 159 RNWFDYRN--HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y     + IV +   G SLY  L  +  + F +  + ++ RQ    + ++H   +
Sbjct: 83  LLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSI 141
Query: 216 IHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS 248
           IH DLK  NI L     VK+ D+ + + +  +S
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS 174

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 43  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 95
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 96  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 152
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPR 244
              +IH DLKPENILL    ++++ D+   KV SP 
Sbjct: 153 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 188

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 68/136 (50%), Gaps = 12/136 (8%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           Y+++ K+G G + +V E  +    E V +KI++ + K +     EI +L+ L     GG 
Sbjct: 39  YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKR--EIKILENLR----GGP 92
Query: 154 RCVQIRNWFD--YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             + + +           +VFE +  +  DF  K  Y++     +R    ++L+++ + H
Sbjct: 93  NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 212 ELRLIHTDLKPENILL 227
            + ++H D+KP N+++
Sbjct: 149 SMGIMHRDVKPHNVMI 164

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 22/159 (13%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH 148
             T  Y +   +G G++     C         A+KI   I+K +     EI++L R  +H
Sbjct: 19  QFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKI---IDKSKRDPTEEIEILLRYGQH 75
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLL-- 204
                  + +++ +D   ++ +V E  K G  L   LR+  +        RE    L   
Sbjct: 76  ----PNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSE------REASAVLFTI 125
Query: 205 -ESVAFMHELRLIHTDLKPENILLV----SAEYVKVPDY 238
            ++V ++H   ++H DLKP NIL V    + E +++ D+
Sbjct: 126 TKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDF 164

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 31  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 82
Query: 159 RNWFDYRN--HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y     + IV +   G SLY  L  +  + F +  + ++ RQ    + ++H   +
Sbjct: 83  LLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSI 141
Query: 216 IHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS 248
           IH DLK  NI L     VK+ D+ + + +  +S
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS 174

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 98  SKMGEGTFGQVVECFDNEKKELVAIK-IVRSINK--YREAAMIEIDVLQRLARHDIGG-- 152
           + +G G +G V    D    E VAIK + R      + + A  E+ +L+ +   ++ G  
Sbjct: 30  THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 153 ---TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
              T    +RN++D        F  + P +   L+K     F  + ++ L  Q+L+ + +
Sbjct: 90  DVFTPASSLRNFYD--------FYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKY 141
Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA 246
           +H   ++H DLKP N+ +     +K+ D+ +   RHA
Sbjct: 142 IHSAGVVHRDLKPGNLAVNEDCELKILDFGL--ARHA 176

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           + ++G G FG +V       K+ VAIK +R      E  + E +V+ +L+       + V
Sbjct: 10  VQEIGSGQFG-LVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSH-----PKLV 63
Query: 157 QIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           Q+      +  IC+VFE +    L D+LR      F  + +  +   + E +A++ E  +
Sbjct: 64  QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACV 122
Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           IH DL   N L+   + +KV D+
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDF 145

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 17/149 (11%)
Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA 146
           GE     Y     +G G+FG V +    E  E VAIK V    +++   +     + R+ 
Sbjct: 35  GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNREL----QIMRIV 89
Query: 147 RHDIGGTRCVQIRNWF----DYRNHI--CIVFEKLGPSLYDFLRKNSY--RSFPIDLVRE 198
           +H       V ++ +F    D ++ +   +V E +  ++Y   R  +   ++ P+ L++ 
Sbjct: 90  KH----PNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKL 145
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              QLL S+A++H + + H D+KP+N+LL
Sbjct: 146 YMYQLLRSLAYIHSIGICHRDIKPQNLLL 174

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           +Y    K+G+G  G V    D    + VAI+ +    + ++  +I   ++ R  ++    
Sbjct: 22  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP--- 78
Query: 153 TRCVQIRNWFD---YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                I N+ D     + + +V E L G SL D + +       I  V    R+ L+++ 
Sbjct: 79  ----NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALE 131
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           F+H  ++IH D+K +NILL     VK+ D+
Sbjct: 132 FLHSNQVIHRDIKSDNILLGMDGSVKLTDF 161

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 41  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 93
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 94  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 150
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPR 244
              +IH DLKPENILL    ++++ D+   KV SP 
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 186

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 44/180 (24%)
Query: 78  KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI 137
           K GHYV                +G GTFG+V           VA+KI+    K R     
Sbjct: 9   KIGHYVLG------------DTLGVGTFGKVKIGEHQLTGHKVAVKILNR-QKIRS---- 51
Query: 138 EIDVLQRLARHDIGGTRCVQIRNWFDYRN-HICIVFEKL--------------GPSLYDF 182
            +DV+ ++ R         +I+N   +R+ HI  +++ +              G  L+D+
Sbjct: 52  -LDVVGKIKR---------EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDY 101
Query: 183 LRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           + K+  R   ++  R L +Q+L +V + H   ++H DLKPEN+LL +    K+ D+ + +
Sbjct: 102 ICKHG-RVEEME-ARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSN 159

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 41  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 93
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 94  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 150
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPR 244
              +IH DLKPENILL    ++++ D+   KV SP 
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 186

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 92
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPR 244
              +IH DLKPENILL    ++++ D+   KV SP 
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 44/180 (24%)
Query: 78  KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI 137
           K GHYV                +G GTFG+V           VA+KI+    K R     
Sbjct: 9   KIGHYVLG------------DTLGVGTFGKVKIGEHQLTGHKVAVKILNR-QKIRS---- 51
Query: 138 EIDVLQRLARHDIGGTRCVQIRNWFDYRN-HICIVFEKL--------------GPSLYDF 182
            +DV+ ++ R         +I+N   +R+ HI  +++ +              G  L+D+
Sbjct: 52  -LDVVGKIKR---------EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDY 101
Query: 183 LRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           + K+  R   ++  R L +Q+L +V + H   ++H DLKPEN+LL +    K+ D+ + +
Sbjct: 102 ICKHG-RVEEME-ARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSN 159

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 16/152 (10%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   P   +Y  L+K S   F          +L  +
Sbjct: 73  ----PNILRLYGYFHDATRVYLILE-YAPRGEVYKELQKLS--KFDEQRTATYITELANA 125
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +++ H  R+IH D+KPEN+LL SA  +K+ D+
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF 157

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 92
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPR 244
              +IH DLKPENILL    ++++ D+   KV SP 
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 16/152 (10%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 72
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGP--SLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   P   +Y  L+K S   F          +L  +
Sbjct: 73  ----PNILRLYGYFHDATRVYLILE-YAPRGEVYKELQKLS--KFDEQRTATYITELANA 125
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +++ H  R+IH D+KPEN+LL SA  +K+ D+
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADF 157

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 92
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPR 244
              +IH DLKPENILL    ++++ D+   KV SP 
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 92
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPR 244
              +IH DLKPENILL    ++++ D+   KV SP 
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 25/159 (15%)
Query: 95  RILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           R+L K+G+G+FG V    +D    + V++ +            ++ DVL +    D    
Sbjct: 21  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAV----------KCLKPDVLSQPEAMD-DFI 69
Query: 154 RCVQIRNWFDYRNHICI----------VFEKLGP--SLYDFLRKNSYRSFPIDLVRELGR 201
           R V   +  D+RN I +          +  +L P  SL D LRK+    F +  +     
Sbjct: 70  REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 128
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           Q+ E + ++   R IH DL   N+LL + + VK+ D+ +
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 38  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 90
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 91  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 147
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPR 244
              +IH DLKPENILL    ++++ D+   KV SP 
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 183

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDV-LQRLA 146
           ++T  Y++   +G+G F  V  C         A KI+ +     R+   +E +  + RL 
Sbjct: 1   SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           +H    +  V++ +         +VF+ + G  L++ +    Y S   D    + +Q+LE
Sbjct: 61  KH----SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-EADASHCI-QQILE 114
Query: 206 SVAFMHELRLIHTDLKPENILLVS---AEYVKVPDY 238
           +V   H++ ++H DLKPEN+LL S      VK+ D+
Sbjct: 115 AVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADF 150

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 38  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 90
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 91  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 147
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPR 244
              +IH DLKPENILL    ++++ D+   KV SP 
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 183

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 18/156 (11%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARHDI 150
           + ++  +GEG +G+V    +   +E VA+KIV   R+++   E    EI +   L   ++
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINAMLNHENV 67
Query: 151 ----GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
               G  R   I+  F        +F+++ P +            P    +    QL+  
Sbjct: 68  VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI----------GMPEPDAQRFFHQLMAG 117
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           V ++H + + H D+KPEN+LL   + +K+ D+ + +
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT 153

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 25/159 (15%)
Query: 95  RILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           R+L K+G+G+FG V    +D    + V++ +            ++ DVL +    D    
Sbjct: 21  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAV----------KCLKPDVLSQPEAMD-DFI 69
Query: 154 RCVQIRNWFDYRNHICI----------VFEKLGP--SLYDFLRKNSYRSFPIDLVRELGR 201
           R V   +  D+RN I +          +  +L P  SL D LRK+    F +  +     
Sbjct: 70  REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 128
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           Q+ E + ++   R IH DL   N+LL + + VK+ D+ +
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 25/159 (15%)
Query: 95  RILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           R+L K+G+G+FG V    +D    + V++ +            ++ DVL +    D    
Sbjct: 15  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAV----------KCLKPDVLSQPEAMD-DFI 63
Query: 154 RCVQIRNWFDYRNHICI----------VFEKLGP--SLYDFLRKNSYRSFPIDLVRELGR 201
           R V   +  D+RN I +          +  +L P  SL D LRK+    F +  +     
Sbjct: 64  REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 122
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           Q+ E + ++   R IH DL   N+LL + + VK+ D+ +
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           + L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L   +
Sbjct: 16  KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I   + V    +   R ++ ++ E L   SL ++L+K+  R   I L+ +   Q+ + + 
Sbjct: 76  IVKYKGV---CYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLL-QYTSQICKGME 131
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++   R IH DL   NIL+ +   VK+ D+
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDF 161

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 92
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPR 244
              +IH DLKPENILL    ++++ D+   KV SP 
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 38  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 90
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 91  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 147
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPR 244
              +IH DLKPENILL    ++++ D+   KV SP 
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 183

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 40  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 92
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 93  FFVKLYFTFQDDEKLYFGLSYAKNG-CLLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPR 244
              +IH DLKPENILL    ++++ D+   KV SP 
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 11/142 (7%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIG 151
           + +  ++G G FG V+     +  E VAIK  R     K RE   +EI ++++L   ++ 
Sbjct: 16  WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL--GPSLYDFLRK----NSYRSFPIDLVRELGRQLLE 205
             R V         N + ++  +   G  L  +L +       +  PI   R L   +  
Sbjct: 76  SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI---RTLLSDISS 132
Query: 206 SVAFMHELRLIHTDLKPENILL 227
           ++ ++HE R+IH DLKPENI+L
Sbjct: 133 ALRYLHENRIIHRDLKPENIVL 154

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 37  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 89
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 90  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 146
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPR 244
              +IH DLKPENILL    ++++ D+   KV SP 
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 182

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH-DIGGTRCVQI 158
           +G G+ G VV     + +  VA+K  R +  + + A++EI +L     H ++    C + 
Sbjct: 23  LGYGSSGTVVFQGSFQGRP-VAVK--RMLIDFCDIALMEIKLLTESDDHPNVIRYYCSET 79
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE-----LGRQLLESVAFMHEL 213
            + F Y     I  E    +L D +   +     + L +E     L RQ+   VA +H L
Sbjct: 80  TDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 134
Query: 214 RLIHTDLKPENILLVSA 230
           ++IH DLKP+NIL+ ++
Sbjct: 135 KIIHRDLKPQNILVSTS 151

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 21/155 (13%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 18  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 70
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 71  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 127
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KVPSP 243
              +IH DLKPENILL    ++++ D+   KV SP
Sbjct: 128 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 162

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 11/142 (7%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIG 151
           + +  ++G G FG V+     +  E VAIK  R     K RE   +EI ++++L   ++ 
Sbjct: 17  WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL--GPSLYDFLRK----NSYRSFPIDLVRELGRQLLE 205
             R V         N + ++  +   G  L  +L +       +  PI   R L   +  
Sbjct: 77  SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI---RTLLSDISS 133
Query: 206 SVAFMHELRLIHTDLKPENILL 227
           ++ ++HE R+IH DLKPENI+L
Sbjct: 134 ALRYLHENRIIHRDLKPENIVL 155

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 37  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 89
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 90  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 146
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPR 244
              +IH DLKPENILL    ++++ D+   KV SP 
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 182

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 25/159 (15%)
Query: 95  RILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           R+L K+G+G+FG V    +D    + V++ +            ++ DVL +    D    
Sbjct: 15  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAV----------KCLKPDVLSQPEAMD-DFI 63
Query: 154 RCVQIRNWFDYRNHICI----------VFEKLGP--SLYDFLRKNSYRSFPIDLVRELGR 201
           R V   +  D+RN I +          +  +L P  SL D LRK+    F +  +     
Sbjct: 64  REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 122
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           Q+ E + ++   R IH DL   N+LL + + VK+ D+ +
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 21/155 (13%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 17  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 69
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 70  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 126
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KVPSP 243
              +IH DLKPENILL    ++++ D+   KV SP
Sbjct: 127 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 161

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 21/155 (13%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 16  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 68
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 69  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 125
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KVPSP 243
              +IH DLKPENILL    ++++ D+   KV SP
Sbjct: 126 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 160

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 21/155 (13%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 15  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 67
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 68  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 124
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KVPSP 243
              +IH DLKPENILL    ++++ D+   KV SP
Sbjct: 125 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 159

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 16/138 (11%)
Query: 100 MGEGTFGQVVECFDNE-KKELVAIKIVRSINKYREAAMIEIDVLQRLARH-DIGGTRCVQ 157
           +G G+ G VV  F    +   VA+K  R +  + + A++EI +L     H ++    C +
Sbjct: 41  LGYGSSGTVV--FQGSFQGRPVAVK--RMLIDFCDIALMEIKLLTESDDHPNVIRYYCSE 96
Query: 158 IRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE-----LGRQLLESVAFMHE 212
             + F Y     I  E    +L D +   +     + L +E     L RQ+   VA +H 
Sbjct: 97  TTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 213 LRLIHTDLKPENILLVSA 230
           L++IH DLKP+NIL+ ++
Sbjct: 152 LKIIHRDLKPQNILVSTS 169

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 12/144 (8%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G+G F +  E  D + KE+ A KIV +S+      RE   +EI + + LA   + G   
Sbjct: 29  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG--- 85
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
                +F+  + + +V E     SL +  ++    + P    R   RQ++    ++H  R
Sbjct: 86  --FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 141
Query: 215 LIHTDLKPENILLVSAEYVKVPDY 238
           +IH DLK  N+ L     VK+ D+
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDF 165

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 25/159 (15%)
Query: 95  RILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           R+L K+G+G+FG V    +D    + V++ +            ++ DVL +    D    
Sbjct: 11  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAV----------KCLKPDVLSQPEAMD-DFI 59
Query: 154 RCVQIRNWFDYRNHICIVFEKLGP------------SLYDFLRKNSYRSFPIDLVRELGR 201
           R V   +  D+RN I +    L P            SL D LRK+    F +  +     
Sbjct: 60  REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 118
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           Q+ E + ++   R IH DL   N+LL + + VK+ D+ +
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 12/148 (8%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G+G F +  E  D + KE+ A KIV +S+      RE   +EI + + LA   + G   
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG--- 79
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
                +F+  + + +V E     SL +  ++    + P    R   RQ++    ++H  R
Sbjct: 80  --FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 135
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKVPS 242
           +IH DLK  N+ L     VK+ D+ + +
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLAT 163

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 12/148 (8%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G+G F +  E  D + KE+ A KIV +S+      RE   +EI + + LA   + G   
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG--- 81
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
                +F+  + + +V E     SL +  ++    + P    R   RQ++    ++H  R
Sbjct: 82  --FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 137
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKVPS 242
           +IH DLK  N+ L     VK+ D+ + +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLAT 165

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 16/138 (11%)
Query: 100 MGEGTFGQVVECFDNE-KKELVAIKIVRSINKYREAAMIEIDVLQRLARH-DIGGTRCVQ 157
           +G G+ G VV  F    +   VA+K  R +  + + A++EI +L     H ++    C +
Sbjct: 41  LGYGSSGTVV--FQGSFQGRPVAVK--RMLIDFCDIALMEIKLLTESDDHPNVIRYYCSE 96
Query: 158 IRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE-----LGRQLLESVAFMHE 212
             + F Y     I  E    +L D +   +     + L +E     L RQ+   VA +H 
Sbjct: 97  TTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 213 LRLIHTDLKPENILLVSA 230
           L++IH DLKP+NIL+ ++
Sbjct: 152 LKIIHRDLKPQNILVSTS 169

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 25/159 (15%)
Query: 95  RILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           R+L K+G+G+FG V    +D    + V++ +            ++ DVL +    D    
Sbjct: 11  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAV----------KCLKPDVLSQPEAMD-DFI 59
Query: 154 RCVQIRNWFDYRNHICI----------VFEKLGP--SLYDFLRKNSYRSFPIDLVRELGR 201
           R V   +  D+RN I +          +  +L P  SL D LRK+    F +  +     
Sbjct: 60  REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 118
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           Q+ E + ++   R IH DL   N+LL + + VK+ D+ +
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 21/156 (13%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 22  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 74
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 75  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 131
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPR 244
              +IH DLKPENILL    ++++ D+   KV SP 
Sbjct: 132 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 167

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 12/144 (8%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G+G F +  E  D + KE+ A KIV +S+      RE   +EI + + LA   + G   
Sbjct: 47  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG--- 103
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
                +F+  + + +V E     SL +  ++    + P    R   RQ++    ++H  R
Sbjct: 104 --FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 159
Query: 215 LIHTDLKPENILLVSAEYVKVPDY 238
           +IH DLK  N+ L     VK+ D+
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDF 183

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 12/144 (8%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G+G F +  E  D + KE+ A KIV +S+      RE   +EI + + LA   + G   
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG--- 105
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
                +F+  + + +V E     SL +  ++    + P    R   RQ++    ++H  R
Sbjct: 106 --FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 161
Query: 215 LIHTDLKPENILLVSAEYVKVPDY 238
           +IH DLK  N+ L     VK+ D+
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDF 185

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH-DIGGTRCVQI 158
           +G G+ G VV     + +  VA+K  R +  + + A++EI +L     H ++    C + 
Sbjct: 23  LGYGSSGTVVFQGSFQGRP-VAVK--RMLIDFCDIALMEIKLLTESDDHPNVIRYYCSET 79
Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE-----LGRQLLESVAFMHEL 213
            + F Y     I  E    +L D +   +     + L +E     L RQ+   VA +H L
Sbjct: 80  TDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 134
Query: 214 RLIHTDLKPENILLVSA 230
           ++IH DLKP+NIL+ ++
Sbjct: 135 KIIHRDLKPQNILVSTS 151

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 19  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 70
Query: 159 RNWFDYRN--HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y     + IV +   G SLY  L  +  + F +  + ++ RQ    + ++H   +
Sbjct: 71  LLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKSI 129
Query: 216 IHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS 248
           IH DLK  NI L     VK+ D+ + + +  +S
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWS 162

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 20/158 (12%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH 148
             T  Y +   +G G++     C         A+KI   I+K +     EI++L R  +H
Sbjct: 19  QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKI---IDKSKRDPTEEIEILLRYGQH 75
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLL--- 204
                  + +++ +D   ++ +V E + G  L D + +  + S      RE    L    
Sbjct: 76  ----PNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFS-----EREASAVLFTIT 126
Query: 205 ESVAFMHELRLIHTDLKPENILLV----SAEYVKVPDY 238
           ++V ++H   ++H DLKP NIL V    + E +++ D+
Sbjct: 127 KTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDF 164

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 12/148 (8%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV-RSI---NKYREAAMIEIDVLQRLARHDIGGTRC 155
           +G+G F +  E  D + KE+ A KIV +S+      RE   +EI + + LA   + G   
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG--- 81
Query: 156 VQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
                +F+  + + +V E     SL +  ++    + P    R   RQ++    ++H  R
Sbjct: 82  --FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP--EARYYLRQIVLGCQYLHRNR 137
Query: 215 LIHTDLKPENILLVSAEYVKVPDYKVPS 242
           +IH DLK  N+ L     VK+ D+ + +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLAT 165

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 26/160 (16%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARHDIGG 152
           +G G FG+VVE   F   K++ V   A+K+++S      +EA M E+ ++  L +H+   
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 110
Query: 153 TRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYR-----SFPI--------DLVRE 198
              V +     +   + ++ E      L +FLR+ S       +F I        DL+  
Sbjct: 111 -NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH- 168
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
              Q+ + +AF+     IH D+   N+LL +    K+ D+
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDF 208

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 25/159 (15%)
Query: 95  RILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           R+L K+G+G+FG V    +D    + V++ +            ++ DVL +    D    
Sbjct: 11  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAV----------KCLKPDVLSQPEAMD-DFI 59
Query: 154 RCVQIRNWFDYRNHICIVFEKLGP------------SLYDFLRKNSYRSFPIDLVRELGR 201
           R V   +  D+RN I +    L P            SL D LRK+    F +  +     
Sbjct: 60  REVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 118
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           Q+ E + ++   R IH DL   N+LL + + VK+ D+ +
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 12/156 (7%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDV-LQRLA 146
           ++T  Y++  ++G+G F  V  C      +  A KI+ +     R+   +E +  + RL 
Sbjct: 1   SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           +H       V++ +         +VF+ + G  L++ +    Y S          +Q+LE
Sbjct: 61  KH----PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEAD--ASHCIQQILE 114
Query: 206 SVAFMHELRLIHTDLKPENILLVS---AEYVKVPDY 238
           SV   H   ++H DLKPEN+LL S      VK+ D+
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADF 150

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 12/155 (7%)
Query: 90  LTPRYRILSKMGEGTFGQVVECFDN-EKKELVAIKIVRSINKYREAAMIEIDV-LQRLAR 147
            T  Y++  ++G+G F  V  C      +E  A+ I       R+   +E +  + RL +
Sbjct: 9   FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLK 68
Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           H       V++ +      H  ++F+ + G  L++ +    Y S   D    + +Q+LE+
Sbjct: 69  H----PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS-EADASHCI-QQILEA 122
Query: 207 VAFMHELRLIHTDLKPENILLVS---AEYVKVPDY 238
           V   H++ ++H +LKPEN+LL S      VK+ D+
Sbjct: 123 VLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADF 157

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 15/153 (9%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLAR-HDIGGTR 154
           +GEG+F  VV   +       AIKI+  R I K  +   +  E DV+ RL     +    
Sbjct: 45  LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 104
Query: 155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR 214
           C Q     D + +  + + K G  L  ++RK    SF     R    +++ ++ ++H   
Sbjct: 105 CFQD----DEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG 157
Query: 215 LIHTDLKPENILLVSAEYVKVPDY---KVPSPR 244
           +IH DLKPENILL    ++++ D+   KV SP 
Sbjct: 158 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 190

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 26/160 (16%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARHDIGG 152
           +G G FG+VVE   F   K++ V   A+K+++S      +EA M E+ ++  L +H+   
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 110
Query: 153 TRCVQIRNWFDYRNHICIVFEKLG-PSLYDFLRKNSYR-----SFPI--------DLVRE 198
              V +     +   + ++ E      L +FLR+ S       +F I        DL+  
Sbjct: 111 -NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH- 168
Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
              Q+ + +AF+     IH D+   N+LL +    K+ D+
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDF 208

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI----EIDVLQRLARHD 149
           + IL  +G G FG+V         ++ A+KI+      + A       E DVL       
Sbjct: 76  FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN----- 130
Query: 150 IGGTRCVQIRNW-FDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
            G ++ +   ++ F   N++ +V +  +G  L   L K   R  P ++ R    +++ ++
Sbjct: 131 -GDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEEMARFYLAEMVIAI 188
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
             +H+L  +H D+KP+NIL+    ++++ D+
Sbjct: 189 DSVHQLHYVHRDIKPDNILMDMNGHIRLADF 219

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-LQRLARHDIGG 152
           + ++  +GEG  G+V    +   +E VA+KIV           I+ ++ + ++  H+   
Sbjct: 8   WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 153 TRCVQIRNWFDYRNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                +  ++ +R    I +  L    G  L+D +  +     P    +    QL+  V 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 118
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           ++H + + H D+KPEN+LL   + +K+ D+ + +
Sbjct: 119 YLHGIGITHRDIKPENLLLDERDNLKISDFGLAT 152

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDV-LQRLA 146
           ++T  Y++  ++G+G F  V  C      +  A KI+ +     R+   +E +  + RL 
Sbjct: 1   SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           +H       V++ +         +VF+ + G  L++ +    Y S   D    + +Q+LE
Sbjct: 61  KH----PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-EADASHCI-QQILE 114
Query: 206 SVAFMHELRLIHTDLKPENILLVS---AEYVKVPDY 238
           SV   H   ++H DLKPEN+LL S      VK+ D+
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADF 150

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 12  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 69
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 70  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 122
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +++ H  R+IH D+KPEN+LL SA  +K+ ++
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIANF 154

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARH 148
           + I   +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVL--FKAQLEKAGVEHQLRREVEIQSHLRH 70
Query: 149 DIGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
                  +++  +F     + ++ E   LG ++Y  L+K S   F          +L  +
Sbjct: 71  ----PNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 123
Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +++ H  R+IH D+KPEN+LL SA  +K+ ++
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIANF 155

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 19/159 (11%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
           ++ +  +G G FGQV +       +   IK V+  N   E A  E+  L +L   +I   
Sbjct: 13  FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNI--V 67
Query: 154 RCVQIRNWFDY----------RNHICIVFEKL----GPSLYDFLRKNSYRSFPIDLVREL 199
                 + FDY          R+    +F ++      +L  ++ K         L  EL
Sbjct: 68  HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALEL 127
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
             Q+ + V ++H  +LI+ DLKP NI LV  + VK+ D+
Sbjct: 128 FEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDF 166

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 8/143 (5%)
Query: 97  LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCV 156
           + ++G G FG +V       K+ VAIK ++  +   +  + E +V+ +L+       + V
Sbjct: 32  VQEIGSGQFG-LVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSH-----PKLV 85
Query: 157 QIRNWFDYRNHICIVFEKLGPS-LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           Q+      +  IC+VFE +    L D+LR      F  + +  +   + E +A++ E  +
Sbjct: 86  QLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACV 144
Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           IH DL   N L+   + +KV D+
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDF 167

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/159 (22%), Positives = 73/159 (45%), Gaps = 25/159 (15%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + L  +G G +G V   +D   ++ VA+K        ++ +   YRE     + +L+ 
Sbjct: 29  RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRE-----LRLLKH 83
Query: 145 LARHDIGG-----TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
           L   ++ G     T    I ++    + + +V   +G  L + ++    ++   + V+ L
Sbjct: 84  LKHENVIGLLDVFTPATSIEDF----SEVYLVTTLMGADLNNIVKS---QALSDEHVQFL 136
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
             QLL  + ++H   +IH DLKP N+ +     +++ D+
Sbjct: 137 VYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDF 175

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 18/151 (11%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           R+++    G+GTFG V    +      VAIK V    ++R     E+ ++Q LA   +  
Sbjct: 24  RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNR---ELQIMQDLAV--LHH 78
Query: 153 TRCVQIRNWF------DYRN-HICIVFEKLGPSLYDFLRKNSYR---SFPIDLVRELGRQ 202
              VQ++++F      D R+ ++ +V E +  +L+   R N YR   + P  L++    Q
Sbjct: 79  PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCR-NYYRRQVAPPPILIKVFLFQ 137
Query: 203 LLESVAFMH--ELRLIHTDLKPENILLVSAE 231
           L+ S+  +H   + + H D+KP N+L+  A+
Sbjct: 138 LIRSIGCLHLPSVNVCHRDIKPHNVLVNEAD 168

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 15/146 (10%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           +G+GT+G V    D   +  +AIK I    ++Y +    EI + + L   +I     VQ 
Sbjct: 16  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNI-----VQY 70
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPI-DLVRELG---RQLLESVAFMHEL 213
              F     I I  E++ G SL   LR    +  P+ D  + +G   +Q+LE + ++H+ 
Sbjct: 71  LGSFSENGFIKIFMEQVPGGSLSALLRS---KWGPLKDNEQTIGFYTKQILEGLKYLHDN 127
Query: 214 RLIHTDLKPENILLVS-AEYVKVPDY 238
           +++H D+K +N+L+ + +  +K+ D+
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDF 153

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 21/156 (13%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARHDIGGTRC 155
           +GEG+F   V   +       AIKI+  R I K  +   +  E DV+ RL          
Sbjct: 38  LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHP 90
Query: 156 VQIRNWFDYRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
             ++ +F +++    +  + + K G  L  ++RK    SF     R    +++ ++ ++H
Sbjct: 91  FFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 147
Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPR 244
              +IH DLKPENILL    ++++ D+   KV SP 
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 183

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 15/146 (10%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           +G+GT+G V    D   +  +AIK I    ++Y +    EI + + L   +I     VQ 
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNI-----VQY 84
Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPI-DLVRELG---RQLLESVAFMHEL 213
              F     I I  E++ G SL   LR    +  P+ D  + +G   +Q+LE + ++H+ 
Sbjct: 85  LGSFSENGFIKIFMEQVPGGSLSALLRS---KWGPLKDNEQTIGFYTKQILEGLKYLHDN 141
Query: 214 RLIHTDLKPENILLVS-AEYVKVPDY 238
           +++H D+K +N+L+ + +  +K+ D+
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDF 167

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++L  +G+G FG V+    + +   VA+K +++ +   +A + E  V+ +L RH    + 
Sbjct: 196 KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQL-RH----SN 247
Query: 155 CVQIRNWF-DYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            VQ+     + +  + IV E +   SL D+LR         D + +    + E++ ++  
Sbjct: 248 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 307
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDY 238
              +H DL   N+L+      KV D+
Sbjct: 308 NNFVHRDLAARNVLVSEDNVAKVSDF 333

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++L  +G+G FG V+    + +   VA+K +++ +   +A + E  V+ +L RH    + 
Sbjct: 15  KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQL-RH----SN 66
Query: 155 CVQIRNWF-DYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            VQ+     + +  + IV E +   SL D+LR         D + +    + E++ ++  
Sbjct: 67  LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 126
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDY 238
              +H DL   N+L+      KV D+
Sbjct: 127 NNFVHRDLAARNVLVSEDNVAKVSDF 152

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++L  +G+G FG V+    + +   VA+K +++ +   +A + E  V+ +L RH    + 
Sbjct: 24  KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQL-RH----SN 75
Query: 155 CVQIRNWF-DYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            VQ+     + +  + IV E +   SL D+LR         D + +    + E++ ++  
Sbjct: 76  LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 135
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDY 238
              +H DL   N+L+      KV D+
Sbjct: 136 NNFVHRDLAARNVLVSEDNVAKVSDF 161

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 100 MGEGTFGQVVEC-FDNE---KKELVAIKIVRSINKYREAAMI--EIDVLQRLARHDIGGT 153
           +GEG FG+V  C +D E     E VA+K ++  +     A +  EI++L+ L   +I   
Sbjct: 17  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL--GRQLLESVAFM 210
           + +      D  N I ++ E L   SL ++L KN  +   I+L ++L    Q+ + + ++
Sbjct: 77  KGICTE---DGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQICKGMDYL 130
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
              + +H DL   N+L+ S   VK+ D+
Sbjct: 131 GSRQYVHRDLAARNVLVESEHQVKIGDF 158

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 15/148 (10%)
Query: 100 MGEGTFGQVVEC-FDNE---KKELVAIKIVRSINKYREAAMI--EIDVLQRLARHDIGGT 153
           +GEG FG+V  C +D E     E VA+K ++  +     A +  EI++L+ L   +I   
Sbjct: 29  LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 154 RCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL--GRQLLESVAFM 210
           + +      D  N I ++ E L   SL ++L KN  +   I+L ++L    Q+ + + ++
Sbjct: 89  KGICTE---DGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQICKGMDYL 142
Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
              + +H DL   N+L+ S   VK+ D+
Sbjct: 143 GSRQYVHRDLAARNVLVESEHQVKIGDF 170

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           +Y    K+G+G  G V    D    + VAI+ +    + ++  +I   ++ R  ++    
Sbjct: 22  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP--- 78
Query: 153 TRCVQIRNWFD---YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                I N+ D     + + +V E L G SL D + +       I  V    R+ L+++ 
Sbjct: 79  ----NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALE 131
Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           F+H  ++IH ++K +NILL     VK+ D+
Sbjct: 132 FLHSNQVIHRNIKSDNILLGMDGSVKLTDF 161

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 13/148 (8%)
Query: 100 MGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGG 152
           +GEG FG+V + C+D   +   E+VA+K ++     + R     EI++L+ L   H +  
Sbjct: 16  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
             C + +   +    + + +  LG SL D+L ++      + L     +Q+ E +A++H 
Sbjct: 76  KGCCEDQG--EKSVQLVMEYVPLG-SLRDYLPRHCVGLAQLLL---FAQQICEGMAYLHA 129
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKV 240
              IH  L   N+LL +   VK+ D+ +
Sbjct: 130 QHYIHRALAARNVLLDNDRLVKIGDFGL 157

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 29/159 (18%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINK--YREAAMIEIDVLQRLARHDIGGTRCVQ 157
           +G G FG V E  +       AIK +R  N+   RE  M E+  L +L    I     V+
Sbjct: 13  LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI-----VR 67
Query: 158 IRNWFDYRNHICIVFEKLGPS-----LY---DFLRKNSYRSF----------PIDLVREL 199
             N +  +N      EKL PS     LY      RK + + +             +   +
Sbjct: 68  YFNAWLEKN----TTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
             Q+ E+V F+H   L+H DLKP NI     + VKV D+
Sbjct: 124 FLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDF 162

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 13/148 (8%)
Query: 100 MGEGTFGQV-VECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGG 152
           +GEG FG+V + C+D   +   E+VA+K ++     + R     EI++L+ L   H +  
Sbjct: 17  LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
             C + +   +    + + +  LG SL D+L ++      + L     +Q+ E +A++H 
Sbjct: 77  KGCCEDQG--EKSVQLVMEYVPLG-SLRDYLPRHCVGLAQLLL---FAQQICEGMAYLHA 130
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKV 240
              IH  L   N+LL +   VK+ D+ +
Sbjct: 131 QHYIHRALAARNVLLDNDRLVKIGDFGL 158

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 20/156 (12%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 20  LGKGKFGNVYLARERQSKFILALKVL--FKTQLEKAGVEHQLRREVEIQSHLRH----PN 73
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 74  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--RFDEQRTATYITELANALSYCHS 130
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDY----KVPSPR 244
            R+IH D+KPEN+LL S   +K+ D+      PS R
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR 166

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 20/156 (12%)
Query: 100 MGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDV-----LQRLARHDIGGTR 154
           +G+G FG V    + + K ++A+K++       E A +E  +     +Q   RH      
Sbjct: 20  LGKGKFGNVYLARERQSKFILALKVL--FKTQLEKAGVEHQLRREVEIQSHLRH----PN 73
Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            +++  +F     + ++ E   LG ++Y  L+K S   F          +L  ++++ H 
Sbjct: 74  ILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--RFDEQRTATYITELANALSYCHS 130
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDY----KVPSPR 244
            R+IH D+KPEN+LL S   +K+ D+      PS R
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR 166

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIG 151
           Y +   +G G    V   +   KKE VAIK +         +  + EI  + +    +I 
Sbjct: 12  YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI- 70
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLR----KNSYRSFPID--LVRELGRQLL 204
               V     F  ++ + +V + L G S+ D ++    K  ++S  +D   +  + R++L
Sbjct: 71  ----VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           E + ++H+   IH D+K  NILL     V++ D+ V +
Sbjct: 127 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSA 164

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 24/173 (13%)
Query: 78  KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI 137
           +   ++       +  Y +  ++G+G F  V  C         A KI+ +    ++ +  
Sbjct: 15  RGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINT----KKLSAR 70
Query: 138 EIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVR 197
           +   L+R AR       C ++++    R H  I  E     ++D +       F   + R
Sbjct: 71  DFQKLEREAR------ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAR 122
Query: 198 ELG---------RQLLESVAFMHELRLIHTDLKPENILLVS---AEYVKVPDY 238
           E           +Q+LES+A+ H   ++H +LKPEN+LL S      VK+ D+
Sbjct: 123 EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADF 175

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 15/151 (9%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD---- 149
           YR+L  +G+G F +V         + VA+KI+       +   +    LQ+L R      
Sbjct: 9   YRLLKTIGKGNFAKVKLARHILTGKEVAVKII-------DKTQLNSSSLQKLFREVRIMK 61
Query: 150 -IGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
            +     V++    +    + +V E   G  ++D+L  + +        R   RQ++ +V
Sbjct: 62  VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGW--MKEKEARAKFRQIVSAV 119
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            + H+  ++H DLK EN+LL +   +K+ D+
Sbjct: 120 QYCHQKFIVHRDLKAENLLLDADMNIKIADF 150

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++L  +G+G FG V+    + +   VA+K +++ +   +A + E  V+ +L RH    + 
Sbjct: 9   KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQL-RH----SN 60
Query: 155 CVQIRNWF-DYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            VQ+     + +  + IV E +   SL D+LR         D + +    + E++ ++  
Sbjct: 61  LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 120
Query: 213 LRLIHTDLKPENILLVSAEYVKVPDY 238
              +H DL   N+L+      KV D+
Sbjct: 121 NNFVHRDLAARNVLVSEDNVAKVSDF 146

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 43  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 94
Query: 159 RNWFDYRN--HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y     + IV +   G SLY  L     +   I L+ ++ RQ  + + ++H   +
Sbjct: 95  LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 153
Query: 216 IHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS 248
           IH DLK  NI L     VK+ D+ + + +  +S
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS 186

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 35  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 86
Query: 159 RNWFDYRN--HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y     + IV +   G SLY  L     +   I L+ ++ RQ  + + ++H   +
Sbjct: 87  LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 145
Query: 216 IHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS 248
           IH DLK  NI L     VK+ D+ + + +  +S
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS 178

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDIG 151
           Y +   +G G    V   +   KKE VAIK +         +  + EI  + +    +I 
Sbjct: 17  YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI- 75
Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLR----KNSYRSFPID--LVRELGRQLL 204
               V     F  ++ + +V + L G S+ D ++    K  ++S  +D   +  + R++L
Sbjct: 76  ----VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           E + ++H+   IH D+K  NILL     V++ D+ V +
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSA 169

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 15  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 66
Query: 159 RNWFDYRN--HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y     + IV +   G SLY  L     +   I L+ ++ RQ  + + ++H   +
Sbjct: 67  LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 125
Query: 216 IHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS 248
           IH DLK  NI L     VK+ D+ + + +  +S
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWS 158

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 15/178 (8%)
Query: 69  GSPPWRPDDKDGHYVFAIGENLT-----PRYRI--LSKMGEGTFGQVVECFDNEKKELVA 121
           GS P R   +  H  F     L      PR  +    K+GEG+ G V         +LVA
Sbjct: 1   GSSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVA 60
Query: 122 IKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLY 180
           +K +    + R   +    V+ R  +H+      V++ N +   + + +V E L G +L 
Sbjct: 61  VKKMDLRKQQRRELLFNEVVIMRDYQHE----NVVEMYNSYLVGDELWVVMEFLEGGALT 116
Query: 181 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           D +          + +  +   +L++++ +H   +IH D+K ++ILL     VK+ D+
Sbjct: 117 DIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF 171

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 15/151 (9%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD---- 149
           YR+L  +G+G F +V         + VA+KI+       +   +    LQ+L R      
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVKII-------DKTQLNSSSLQKLFREVRIMK 68
Query: 150 -IGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
            +     V++    +    + +V E   G  ++D+L   ++        R   RQ++ +V
Sbjct: 69  VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSAV 126
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            + H+  ++H DLK EN+LL +   +K+ D+
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADF 157

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 43  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 94
Query: 159 RNWFDYRN--HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y     + IV +   G SLY  L     +   I L+ ++ RQ  + + ++H   +
Sbjct: 95  LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 153
Query: 216 IHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS 248
           IH DLK  NI L     VK+ D+ + + +  +S
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS 186

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 15/151 (9%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD---- 149
           YR+L  +G+G F +V         + VA+KI+       +   +    LQ+L R      
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVKII-------DKTQLNSSSLQKLFREVRIMK 68
Query: 150 -IGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
            +     V++    +    + +V E   G  ++D+L   ++        R   RQ++ +V
Sbjct: 69  VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSAV 126
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            + H+  ++H DLK EN+LL +   +K+ D+
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADF 157

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 69/151 (45%), Gaps = 15/151 (9%)
Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD---- 149
           YR+L  +G+G F +V         + VA+KI+       +   +    LQ+L R      
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVKII-------DKTQLNSSSLQKLFREVRIMK 68
Query: 150 -IGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
            +     V++    +    + +V E   G  ++D+L   ++        R   RQ++ +V
Sbjct: 69  VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSAV 126
Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            + H+  ++H DLK EN+LL +   +K+ D+
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADF 157

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 15  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 66
Query: 159 RNWFDYRN--HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y     + IV +   G SLY  L     +   I L+ ++ RQ  + + ++H   +
Sbjct: 67  LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 125
Query: 216 IHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS 248
           IH DLK  NI L     VK+ D+ + + +  +S
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS 158

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 42  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 93
Query: 159 RNWFDYRN--HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y     + IV +   G SLY  L     +   I L+ ++ RQ  + + ++H   +
Sbjct: 94  LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 152
Query: 216 IHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS 248
           IH DLK  NI L     VK+ D+ + + +  +S
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS 185

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 15  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 66
Query: 159 RNWFDYRN--HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y     + IV +   G SLY  L     +   I L+ ++ RQ  + + ++H   +
Sbjct: 67  LLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 125
Query: 216 IHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS 248
           IH DLK  NI L     VK+ D+ + + +  +S
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS 158

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 20  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 71
Query: 159 RNWFDYRN--HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y     + IV +   G SLY  L     +   I L+ ++ RQ  + + ++H   +
Sbjct: 72  LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 130
Query: 216 IHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS 248
           IH DLK  NI L     VK+ D+ + + +  +S
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS 163

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 14/156 (8%)
Query: 90  LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR-- 147
            +  Y +  ++G+G F  V  C         A KI+ +    ++ +  +   L+R AR  
Sbjct: 4   FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINT----KKLSARDFQKLEREARIC 59
Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
             +     V++ +     +   +VF+ +  G    D + +  Y            +Q+LE
Sbjct: 60  RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD---ASHCIQQILE 116
Query: 206 SVAFMHELRLIHTDLKPENILLVS---AEYVKVPDY 238
           S+A+ H   ++H +LKPEN+LL S      VK+ D+
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADF 152

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/159 (22%), Positives = 73/159 (45%), Gaps = 25/159 (15%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIK--------IVRSINKYREAAMIEIDVLQR 144
           R + L  +G G +G V   +D   ++ VA+K        ++ +   YRE     + +L+ 
Sbjct: 29  RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRE-----LRLLKH 83
Query: 145 LARHDIGG-----TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREL 199
           L   ++ G     T    I ++    + + +V   +G  L + ++    ++   + V+ L
Sbjct: 84  LKHENVIGLLDVFTPATSIEDF----SEVYLVTTLMGADLNNIVK---CQALSDEHVQFL 136
Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
             QLL  + ++H   +IH DLKP N+ +     +++ D+
Sbjct: 137 VYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDF 175

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 20  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 71
Query: 159 RNWFDYRN--HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y     + IV +   G SLY  L     +   I L+ ++ RQ  + + ++H   +
Sbjct: 72  LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 130
Query: 216 IHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS 248
           IH DLK  NI L     VK+ D+ + + +  +S
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS 163

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 18/157 (11%)
Query: 100 MGEGTFGQVVEC--FDNEKKELV---AIKIVRSINKY--REAAMIEIDVLQRLARHD--- 149
           +G G FG+VVE   F   K++ V   A+K+++S      +EA M E+ ++  L +H+   
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 150 ------IGGTRCVQIRNWFDYRNHICIVFEKLGPSL-YDFL-RKNSYRSFPIDLVRELGR 201
                   G   + I  +  Y + +  +  K  P L Y +    N         +     
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           Q+ + +AF+     IH D+   N+LL +    K+ D+
Sbjct: 174 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDF 210

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++G G+FG V +   +    +  + +     +  +A   E+ VL++        TR V I
Sbjct: 17  RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--------TRHVNI 68
Query: 159 RNWFDYRN--HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
             +  Y     + IV +   G SLY  L     +   I L+ ++ RQ  + + ++H   +
Sbjct: 69  LLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKSI 127
Query: 216 IHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS 248
           IH DLK  NI L     VK+ D+ + + +  +S
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS 160

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 34/177 (19%), Positives = 79/177 (44%), Gaps = 36/177 (20%)
Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--------------- 137
           +Y +  ++G+G++G V   ++       A+K++      R+A                  
Sbjct: 14  QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73
Query: 138 ------------EIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL--GPSLYDFL 183
                       EI +L++L   ++   + V++ +  +  +H+ +VFE +  GP     +
Sbjct: 74  IQPRGPIEQVYQEIAILKKLDHPNV--VKLVEVLDDPN-EDHLYMVFELVNQGP----VM 126
Query: 184 RKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
              + +    D  R   + L++ + ++H  ++IH D+KP N+L+    ++K+ D+ V
Sbjct: 127 EVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGV 183

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	264
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	3e-96
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	1e-89
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	7e-89
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	4e-77
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	1e-73
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	3e-69
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	1e-59
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-29
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-28
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	6e-28
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-27
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	9e-26
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	6e-25
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	4e-24
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	5e-24
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-23
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-23
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	3e-23
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-23
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	7e-23
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	8e-23
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	9e-23
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	9e-23
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-22
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-22
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-22
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-22
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-22
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-22
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	4e-22
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	5e-22
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	5e-22
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	6e-22
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	8e-22
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	8e-22
3bhy_A	283	Death-associated protein kinase 3; death associate	8e-22
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	9e-22
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	1e-21
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-21
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-21
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	1e-21
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	1e-21
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-21
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-21
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	3e-21
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	4e-21
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	4e-21
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	5e-21
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	5e-21
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	6e-21
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	7e-21
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	7e-21
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	1e-20
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	1e-20
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-20
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-20
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-20
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-20
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-20
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	2e-20
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-20
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	3e-20
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	3e-20
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	3e-20
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-20
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	4e-20
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	4e-20
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	4e-20
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	8e-20
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-19
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-19
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-19
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-19
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	3e-19
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	3e-19
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	3e-19
3o0g_A	292	Cell division protein kinase 5; kinase activator c	4e-19
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	5e-19
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	5e-19
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	5e-19
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	8e-19
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	9e-19
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	1e-18
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-18
3niz_A	311	Rhodanese family protein; structural genomics, str	5e-18
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	6e-18
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	7e-18
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	1e-17
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	2e-17
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	3e-17
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	3e-17
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	4e-17
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	6e-17
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	9e-17
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	9e-17
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	1e-16
3rp9_A	458	Mitogen-activated protein kinase; structural genom	4e-16
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	7e-16
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-15
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	2e-15
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-15
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	3e-15
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	3e-15
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	3e-15
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	4e-15
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	4e-15
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	6e-15
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	9e-15
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	9e-15
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	1e-14
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-14
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-14
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-14
3fme_A	290	Dual specificity mitogen-activated protein kinase;	3e-14
2dyl_A	318	Dual specificity mitogen-activated protein kinase	3e-14
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	3e-14
3an0_A	340	Dual specificity mitogen-activated protein kinase;	4e-14
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	4e-14
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	6e-14
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	6e-14
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	2e-13
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	2e-13
3aln_A	327	Dual specificity mitogen-activated protein kinase;	3e-13
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	4e-13
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	5e-13
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	8e-13
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	9e-13
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-12
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-12
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-12
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	2e-12
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	2e-12
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-12
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	3e-12
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	4e-12
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	4e-12
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	4e-12
3ork_A	311	Serine/threonine protein kinase; structural genomi	4e-12
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	5e-12
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-04
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	5e-12
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	5e-12
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	7e-12
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	7e-12
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-11
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	1e-11
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	1e-11
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-11
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-11
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-11
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	3e-11
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	3e-11
3uqc_A	286	Probable conserved transmembrane protein; structur	3e-11
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-11
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	3e-11
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	4e-11
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	4e-11
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	7e-11
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-10
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-10
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-10
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-10
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-10
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	3e-10
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	4e-10
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	7e-10
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	7e-10
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	7e-10
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-09
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-09
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	1e-09
3q4u_A	301	Activin receptor type-1; structural genomics conso	1e-09
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	1e-09
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-09
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	2e-09
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-09
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	3e-09
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	3e-09
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	4e-09
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	4e-09
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	4e-09
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	4e-09
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	4e-09
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	4e-09
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	6e-09
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	6e-09
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	6e-09
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	7e-09
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	7e-09
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	7e-09
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	7e-09
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	8e-09
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	9e-09
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	9e-09
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	1e-08
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	1e-08
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	1e-08
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-08
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-08
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-08
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-08
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-08
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-08
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-08
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	3e-08
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	4e-08
3soc_A	322	Activin receptor type-2A; structural genomics cons	4e-08
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	1e-07
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	1e-07
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-07
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-07
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-07
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	3e-07
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	3e-07
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	3e-07
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	4e-07
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	1e-06
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-06
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-06
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	2e-06
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	4e-06
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	4e-06
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	4e-06
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	5e-06
4aoj_A	329	High affinity nerve growth factor receptor; transf	6e-06
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	6e-06
3pls_A	298	Macrophage-stimulating protein receptor; protein k	8e-06
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	3e-05
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	3e-05
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	5e-05
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-04
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	6e-04

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score =  285 bits (732), Expect = 3e-96
 Identities = 60/177 (33%), Positives = 104/177 (58%)

Query: 66  PRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV 125
               +  ++ DD+  H+ +  G  L   + ++ KMG+GTFG+V+ C   + K+  A+K+V
Sbjct: 9   SGRENLYFQGDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVV 68

Query: 126 RSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
           R+I KY  +A IE D+L+++   DI     V+    F Y +H+C++FE LGPSLY+ + +
Sbjct: 69  RNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITR 128

Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS 242
           N+Y  F I+ ++    ++L+++ ++ ++ L HTDLKPENILL    + K        
Sbjct: 129 NNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRV 185

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score =  268 bits (688), Expect = 1e-89
 Identities = 75/171 (43%), Positives = 116/171 (67%), Gaps = 2/171 (1%)

Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSINKYREA 134
           DDK+GH V  IG+ L  RY I+  +GEGTFG+VVEC D+ + K  VA+KI+R++ KYREA
Sbjct: 3   DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 62

Query: 135 AMIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI 193
           A +EI+VL+++   D      CV + +WF++  H+CI FE LG + ++FL++N+++ +P+
Sbjct: 63  ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 122

Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR 244
             VR +  QL  ++ F+HE +L HTDLKPENIL V++E+  + +       
Sbjct: 123 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEE 173

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score =  266 bits (682), Expect = 7e-89
 Identities = 74/167 (44%), Positives = 109/167 (65%), Gaps = 2/167 (1%)

Query: 80  GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSINKYREAAMIE 138
            H +   G+ L+ RY I+  +GEG FG+VVEC D++     VA+KIV+++++Y EAA  E
Sbjct: 2   MHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSE 61

Query: 139 IDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVR 197
           I VL+ L   D   T RCVQ+  WF++  HICIVFE LG S YDF+++N +  F +D +R
Sbjct: 62  IQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIR 121

Query: 198 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR 244
           ++  Q+ +SV F+H  +L HTDLKPENIL V ++Y +  + K+    
Sbjct: 122 KMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDE 168

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score =  239 bits (611), Expect = 4e-77
 Identities = 62/166 (37%), Positives = 102/166 (61%), Gaps = 3/166 (1%)

Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
           DD  G YV    +++  RY +L  +G+G+FGQVV+ +D++  + VA+K+VR+  ++   A
Sbjct: 81  DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140

Query: 136 MIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
             EI +L+ L + D   T   + +   F +RNHIC+ FE L  +LY+ ++KN ++ F + 
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200

Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY--VKVPDY 238
           LVR+    +L+ +  +H+ R+IH DLKPENILL       +KV D+
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDF 246

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score =  228 bits (583), Expect = 1e-73
 Identities = 64/167 (38%), Positives = 103/167 (61%), Gaps = 5/167 (2%)

Query: 76  DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAA 135
           DD +  Y+   GE    RY I S +G+G+FGQVV+ +D  ++E VAIKI+++   +   A
Sbjct: 38  DDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA 97

Query: 136 MIEIDVLQRLARHDIGGT-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
            IE+ +L+ + +HD       V ++  F +RNH+C+VFE L  +LYD LR  ++R   ++
Sbjct: 98  QIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLN 157

Query: 195 LVRELGRQLLESVAFMH--ELRLIHTDLKPENILLVSAEY--VKVPD 237
           L R+  +Q+  ++ F+   EL +IH DLKPENILL + +   +K+ D
Sbjct: 158 LTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVD 204

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score =  217 bits (554), Expect = 3e-69
 Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 12/169 (7%)

Query: 76  DDKDGHYVFAIGENLT-PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA 134
               G++    GE     RY ++ K+G G F  V    D      VA+KIVR    Y EA
Sbjct: 2   YRPGGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEA 61

Query: 135 AMIEIDVLQRLARHD------IGGTRCVQIRNWFDYRN----HICIVFEKLGPSLYDFLR 184
           A  EI +LQR+   D      +G    +++ + F+++     H+ +VFE LG +L   ++
Sbjct: 62  AEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIK 121

Query: 185 KNSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAEY 232
           K  +R  P+  V+++ +QLL  + +MH    +IHTD+KPEN+L+   + 
Sbjct: 122 KYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDS 170

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score =  193 bits (491), Expect = 1e-59
 Identities = 57/169 (33%), Positives = 95/169 (56%), Gaps = 8/169 (4%)

Query: 72  PWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY 131
                 K G+++  IG+    RY ++ K+G G F  V   +D + K+ VA+K+V+S   Y
Sbjct: 17  DPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHY 76

Query: 132 REAAMIEIDVLQRLARHDI---GGTRCVQIRNWFDYR----NHICIVFEKLGPSLYDFLR 184
            E A+ EI +L+ +   D         VQ+ + F        HIC+VFE LG  L  ++ 
Sbjct: 77  TETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWII 136

Query: 185 KNSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTDLKPENILLVSAEY 232
           K++Y+  P+  V+++ +Q+L+ + ++H + R+IHTD+KPENILL   E 
Sbjct: 137 KSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQ 185

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  111 bits (280), Expect = 3e-29
 Identities = 40/148 (27%), Positives = 75/148 (50%), Gaps = 10/148 (6%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHD 149
            Y IL ++G G   +V +   NEKK++ AIK V    + N+  ++   EI  L +L +  
Sbjct: 29  IYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-QQ- 85

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
               + +++ ++     +I +V E     L  +L+K   +S      +   + +LE+V  
Sbjct: 86  -HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHT 142

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPD 237
           +H+  ++H+DLKP N L+V    +K+ D
Sbjct: 143 IHQHGIVHSDLKPANFLIVDGM-LKLID 169

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  110 bits (276), Expect = 1e-28
 Identities = 40/148 (27%), Positives = 75/148 (50%), Gaps = 10/148 (6%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHD 149
            Y IL ++G G   +V +   NEKK++ AIK V    + N+  ++   EI  L +L +  
Sbjct: 10  IYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-QQ- 66

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
               + +++ ++     +I +V E     L  +L+K   +S      +   + +LE+V  
Sbjct: 67  -HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHT 123

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPD 237
           +H+  ++H+DLKP N L+V    +K+ D
Sbjct: 124 IHQHGIVHSDLKPANFLIVDGM-LKLID 150

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  107 bits (270), Expect = 6e-28
 Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 8/148 (5%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD 149
            ++ LS++G G++G+V +    E   L A+K   S     K R   + E+   +++ +H 
Sbjct: 58  SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHP 117

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                CV++   ++    + +  E  GPSL          S P   V    R  L ++A 
Sbjct: 118 ----CCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAH 172

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPD 237
           +H   L+H D+KP NI L      K+ D
Sbjct: 173 LHSQGLVHLDVKPANIFLGPRGRCKLGD 200

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  108 bits (271), Expect = 2e-27
 Identities = 40/148 (27%), Positives = 75/148 (50%), Gaps = 10/148 (6%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHD 149
            Y IL ++G G   +V +   NEKK++ AIK V    + N+  ++   EI  L +L +  
Sbjct: 57  IYSILKQIGSGGSSKVFQVL-NEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL-QQ- 113

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
               + +++ ++     +I +V E     L  +L+K   +S      +   + +LE+V  
Sbjct: 114 -HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHT 170

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPD 237
           +H+  ++H+DLKP N L+V    +K+ D
Sbjct: 171 IHQHGIVHSDLKPANFLIVDGM-LKLID 197

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  101 bits (254), Expect = 9e-26
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 10/141 (7%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHD 149
            +  L K+G G FG V +C       + AIK  +   + +   + A+ E+     L +H 
Sbjct: 12  EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHS 71

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLES 206
                 V+  + +   +H+ I  E   G SL D + +N      F    +++L  Q+   
Sbjct: 72  ----HVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 127

Query: 207 VAFMHELRLIHTDLKPENILL 227
           + ++H + L+H D+KP NI +
Sbjct: 128 LRYIHSMSLVHMDIKPSNIFI 148

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 99.7 bits (249), Expect = 6e-25
 Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 12/154 (7%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD---- 149
           +  ++ +G+G FGQVV+  +       AIK +R   +     + E+ +L  L  H     
Sbjct: 8   FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL-NHQYVVR 66

Query: 150 -----IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQL 203
                +     V+       ++ + I  E     +LYD +   +  +   D    L RQ+
Sbjct: 67  YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQI 125

Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           LE+++++H   +IH DLKP NI +  +  VK+ D
Sbjct: 126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGD 159

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 98.1 bits (245), Expect = 4e-24
 Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 16/156 (10%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
              T  Y +   +G G++     C         A+KI   I+K +     EI++L R  +
Sbjct: 18  IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKI---IDKSKRDPTEEIEILLRYGQ 74

Query: 148 HD-IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           H  I     + +++ +D   ++ +V E + G  L D + +  +  F       +   + +
Sbjct: 75  HPNI-----ITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF--FSEREASAVLFTITK 127

Query: 206 SVAFMHELRLIHTDLKPENILLVS----AEYVKVPD 237
           +V ++H   ++H DLKP NIL V      E +++ D
Sbjct: 128 TVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICD 163

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 97.7 bits (244), Expect = 5e-24
 Identities = 31/145 (21%), Positives = 63/145 (43%), Gaps = 7/145 (4%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
           + L  +Y I   +G G FG V  C +   K+    K V+     +     EI +L    R
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA-R 59

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           H       + +   F+    + ++FE + G  +++ +  +++       +     Q+ E+
Sbjct: 60  HR----NILHLHESFESMEELVMIFEFISGLDIFERINTSAF-ELNEREIVSYVHQVCEA 114

Query: 207 VAFMHELRLIHTDLKPENILLVSAE 231
           + F+H   + H D++PENI+  +  
Sbjct: 115 LQFLHSHNIGHFDIRPENIIYQTRR 139

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 96.9 bits (242), Expect = 1e-23
 Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 9/150 (6%)

Query: 87  GENLTPRYRILSK-MGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVL 142
            EN    Y + SK +G G F  V +C      +  A K +   R     R   + EI VL
Sbjct: 23  MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVL 82

Query: 143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGR 201
           +          R + +   ++  + I ++ E   G  ++             + V  L +
Sbjct: 83  ELAKSCP----RVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIK 138

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAE 231
           Q+LE V ++H+  ++H DLKP+NILL S  
Sbjct: 139 QILEGVYYLHQNNIVHLDLKPQNILLSSIY 168

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 95.8 bits (239), Expect = 1e-23
 Identities = 37/158 (23%), Positives = 59/158 (37%), Gaps = 17/158 (10%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH---- 148
            ++ +  +G G FGQV +       +   IK    +    E A  E+  L +L  H    
Sbjct: 12  DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKR---VKYNNEKAEREVKALAKL-DHVNIV 67

Query: 149 --------DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
                              +       + I  E     +L  ++ K         L  EL
Sbjct: 68  HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALEL 127

Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
             Q+ + V ++H  +LI+ DLKP NI LV  + VK+ D
Sbjct: 128 FEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGD 165

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 95.3 bits (238), Expect = 3e-23
 Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 13/150 (8%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRLARH 148
           +Y  + K+GEG++G V +C + +  ++VAIK     ++        A+ EI +L++L +H
Sbjct: 4   KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFL-ESEDDPVIKKIALREIRMLKQL-KH 61

Query: 149 D-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
             +     V +   F  +  + +VFE    ++   L +   R  P  LV+ +  Q L++V
Sbjct: 62  PNL-----VNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAV 115

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            F H+   IH D+KPENIL+     +K+ D
Sbjct: 116 NFCHKHNCIHRDVKPENILITKHSVIKLCD 145

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 95.1 bits (237), Expect = 3e-23
 Identities = 46/178 (25%), Positives = 73/178 (41%), Gaps = 14/178 (7%)

Query: 68  TGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS 127
              PP             +G N    +RI  K+G G F +V           VA+K V+ 
Sbjct: 8   MQGPPVPQFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQI 67

Query: 128 IN----KYREAAMIEIDVLQRLARHD-IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYD 181
            +    K R   + EID+L++L  H  +     ++    F   N + IV E      L  
Sbjct: 68  FDLMDAKARADCIKEIDLLKQL-NHPNV-----IKYYASFIEDNELNIVLELADAGDLSR 121

Query: 182 FLR--KNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            ++  K   R  P   V +   QL  ++  MH  R++H D+KP N+ + +   VK+ D
Sbjct: 122 MIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGD 179

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 95.9 bits (239), Expect = 7e-23
 Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 11/156 (7%)

Query: 80  GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREAAM 136
           G            RY I+  +G+G+FG+V++C D   ++  A+K++    + NK     +
Sbjct: 10  GRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL 69

Query: 137 IEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDL 195
            E+++L++L   +I     +++    +  +   IV E   G  L+D + K     F    
Sbjct: 70  REVELLKKLDHPNI-----MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHD 122

Query: 196 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE 231
              + +Q+   + +MH+  ++H DLKPENILL S E
Sbjct: 123 AARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE 158

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 93.8 bits (234), Expect = 8e-23
 Identities = 34/146 (23%), Positives = 74/146 (50%), Gaps = 9/146 (6%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLA 146
            N+   +  +  +G G F +V         +L A+K ++    +R++++  EI VL+++ 
Sbjct: 5   TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIK 64

Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
             +I     V + + ++   H  +V + + G  L+D + +     +       + +Q+L 
Sbjct: 65  HENI-----VTLEDIYESTTHYYLVMQLVSGGELFDRILERGV--YTEKDASLVIQQVLS 117

Query: 206 SVAFMHELRLIHTDLKPENILLVSAE 231
           +V ++HE  ++H DLKPEN+L ++ E
Sbjct: 118 AVKYLHENGIVHRDLKPENLLYLTPE 143

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 94.2 bits (235), Expect = 9e-23
 Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 13/150 (8%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRLARH 148
           +Y  L  +GEG++G V++C + +   +VAIK     +   +     AM EI +L++L RH
Sbjct: 26  KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFL-ESDDDKMVKKIAMREIKLLKQL-RH 83

Query: 149 D-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           + +     V +      +    +VFE +  ++ D L           +V++   Q++  +
Sbjct: 84  ENL-----VNLLEVCKKKKRWYLVFEFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGI 137

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            F H   +IH D+KPENIL+  +  VK+ D
Sbjct: 138 GFCHSHNIIHRDIKPENILVSQSGVVKLCD 167

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 94.4 bits (235), Expect = 9e-23
 Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 11/150 (7%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD 149
           +Y  L K+GEG+FG+ +     E      IK +       K RE +  E+ VL  + +H 
Sbjct: 25  KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM-KHP 83

Query: 150 -IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
            I     VQ R  F+    + IV +   G  L+  +       F  D + +   Q+  ++
Sbjct: 84  NI-----VQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLAL 138

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPD 237
             +H+ +++H D+K +NI L     V++ D
Sbjct: 139 KHVHDRKILHRDIKSQNIFLTKDGTVQLGD 168

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 94.4 bits (235), Expect = 2e-22
 Identities = 38/154 (24%), Positives = 68/154 (44%), Gaps = 10/154 (6%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLA 146
            ++   Y IL ++G G FG V  C +     +   K +       +     EI ++ +L 
Sbjct: 47  GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL- 105

Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
            H     + + + + F+ +  + ++ E L G  L+D +    Y       V    RQ  E
Sbjct: 106 HHP----KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY-KMSEAEVINYMRQACE 160

Query: 206 SVAFMHELRLIHTDLKPENILLVSAE--YVKVPD 237
            +  MHE  ++H D+KPENI+  + +   VK+ D
Sbjct: 161 GLKHMHEHSIVHLDIKPENIMCETKKASSVKIID 194

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 92.7 bits (231), Expect = 2e-22
 Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 16/158 (10%)

Query: 80  GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-- 137
           G         +   +    K+G G FG V    +        IK    INK R    +  
Sbjct: 10  GRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKT---INKDRSQVPMEQ 66

Query: 138 ---EIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFL--RKNSYRSF 191
              EI+VL+ L   +I     ++I   F+  +++ IV E   G  L + +   +   ++ 
Sbjct: 67  IEAEIEVLKSLDHPNI-----IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKAL 121

Query: 192 PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS 229
               V EL +Q++ ++A+ H   ++H DLKPENIL   
Sbjct: 122 SEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQD 159

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 93.9 bits (233), Expect = 2e-22
 Identities = 29/147 (19%), Positives = 62/147 (42%), Gaps = 15/147 (10%)

Query: 93  RYRILSKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLA 146
              +   +GEG F QV E       D + K+   +K+ +  N +        ++ L+   
Sbjct: 66  LVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSM 125

Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFL---RKNSYRSFPIDLVRELGRQ 202
           +H       ++  +   ++N   +V E     +L + +   +    +  P  LV     +
Sbjct: 126 QHMF-----MKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMR 180

Query: 203 LLESVAFMHELRLIHTDLKPENILLVS 229
           +L  +  +H+  +IH D+KP+N +L +
Sbjct: 181 MLYMIEQVHDCEIIHGDIKPDNFILGN 207

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 92.3 bits (230), Expect = 2e-22
 Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 11/158 (6%)

Query: 78  KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREA 134
             G            RY I+  +G+G+FG+V++C D   ++  A+K++    + NK    
Sbjct: 8   SSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST 67

Query: 135 AMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPI 193
            + E+++L++L   +I     +++    +  +   IV E   G  L+D + K     F  
Sbjct: 68  ILREVELLKKLDHPNI-----MKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSE 120

Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE 231
                + +Q+   + +MH+  ++H DLKPENILL S E
Sbjct: 121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE 158

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 93.6 bits (233), Expect = 2e-22
 Identities = 49/239 (20%), Positives = 89/239 (37%), Gaps = 31/239 (12%)

Query: 10  PHKNMDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTG 69
             +++    R++ R         P            +  N   P    +  F    P   
Sbjct: 25  EIRHLPNLNREQRRAFIRSLRDDPSQSANLLA--EAKKLNDAQPKGTENLYFQSMGPEDE 82

Query: 70  SPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV---- 125
            P W              +    +Y     +G G    V  C         A+KI+    
Sbjct: 83  LPDWAA-----------AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTA 131

Query: 126 -----RSINKYREAAMIEIDVLQRLARHD-IGGTRCVQIRNWFDYRNHICIVFEKL-GPS 178
                  + + REA   E  +L+++A H  I     + + + ++  + + +VF+ +    
Sbjct: 132 ERLSPEQLEEVREATRRETHILRQVAGHPHI-----ITLIDSYESSSFMFLVFDLMRKGE 186

Query: 179 LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           L+D+L +           R + R LLE+V+F+H   ++H DLKPENILL     +++ D
Sbjct: 187 LFDYLTEKVA--LSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSD 243

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 92.5 bits (230), Expect = 3e-22
 Identities = 32/146 (21%), Positives = 61/146 (41%), Gaps = 13/146 (8%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHD- 149
            + +   +G+G    V      +  +L AIK+    S  +  +  M E +VL++L  H  
Sbjct: 10  LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKN 68

Query: 150 IGGTRCVQIRNWFDYRN--HICIVFEKL-GPSLYDFLRKN-SYRSFPIDLVRELGRQLLE 205
           I     V++    +     H  ++ E     SLY  L +  +    P      + R ++ 
Sbjct: 69  I-----VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG 123

Query: 206 SVAFMHELRLIHTDLKPENILLVSAE 231
            +  + E  ++H ++KP NI+ V  E
Sbjct: 124 GMNHLRENGIVHRNIKPGNIMRVIGE 149

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 94.0 bits (234), Expect = 4e-22
 Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 11/158 (6%)

Query: 78  KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV---RSINKYREA 134
             G ++ +   +L+  Y+ + K+G G +G+V+ C D       AIKI+            
Sbjct: 23  TPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSK 82

Query: 135 AMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPI 193
            + E+ VL+ L   +I     +++ ++F+ + +  +V E   G  L+D +       F  
Sbjct: 83  LLEEVAVLKLLDHPNI-----MKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK--FNE 135

Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE 231
                + +Q+L  V ++H+  ++H DLKPEN+LL S E
Sbjct: 136 VDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKE 173

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 94.1 bits (234), Expect = 5e-22
 Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 10/154 (6%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY-REAAMIEIDVLQRLA 146
           +++   Y I  ++G G FG V    +       A K V + ++  +E    EI  +  L 
Sbjct: 153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL- 211

Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           RH       V + + F+  N + +++E + G  L++ +          D   E  RQ+ +
Sbjct: 212 RHP----TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCK 266

Query: 206 SVAFMHELRLIHTDLKPENILLVSAE--YVKVPD 237
            +  MHE   +H DLKPENI+  +     +K+ D
Sbjct: 267 GLCHMHENNYVHLDLKPENIMFTTKRSNELKLID 300

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 93.6 bits (233), Expect = 5e-22
 Identities = 40/157 (25%), Positives = 80/157 (50%), Gaps = 12/157 (7%)

Query: 80  GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI 137
           G +V       + RY+    +G+G+FG+V+ C D    +  A+K++  R + +  +   +
Sbjct: 14  GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 73

Query: 138 --EIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID 194
             E+ +L++L   +I     +++  +F+ + +  +V E   G  L+D +       F   
Sbjct: 74  LREVQLLKQLDHPNI-----MKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEV 126

Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE 231
               + RQ+L  + +MH+ +++H DLKPEN+LL S  
Sbjct: 127 DAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKS 163

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 92.1 bits (229), Expect = 6e-22
 Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 8/137 (5%)

Query: 92  PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG 151
           P +R+  K+G G FG++    +    E VAIK+    ++      +E    ++L      
Sbjct: 9   PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAP-QLHLEYRFYKQL----GS 63

Query: 152 GTRCVQIRNWF-DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           G    Q+  +F     +  +V E LGPSL D L     R+F +  V  +  QL+  + ++
Sbjct: 64  GDGIPQVY-YFGPCGKYNAMVLELLGPSLED-LFDLCDRTFSLKTVLMIAIQLISRMEYV 121

Query: 211 HELRLIHTDLKPENILL 227
           H   LI+ D+KPEN L+
Sbjct: 122 HSKNLIYRDVKPENFLI 138

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 92.0 bits (229), Expect = 8e-22
 Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 13/147 (8%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRL 145
           + L+  + + S++G G    V  C     ++  A+K    + K  +  ++  EI VL RL
Sbjct: 49  DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALK---VLKKTVDKKIVRTEIGVLLRL 105

Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
           +  +I     ++++  F+    I +V E   G  L+D + +  Y  +      +  +Q+L
Sbjct: 106 SHPNI-----IKLKEIFETPTEISLVLELVTGGELFDRIVEKGY--YSERDAADAVKQIL 158

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAE 231
           E+VA++HE  ++H DLKPEN+L  +  
Sbjct: 159 EAVAYLHENGIVHRDLKPENLLYATPA 185

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 92.6 bits (230), Expect = 8e-22
 Identities = 32/146 (21%), Positives = 61/146 (41%), Gaps = 13/146 (8%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHD- 149
            + +   +G+G    V      +  +L AIK+    S  +  +  M E +VL++L  H  
Sbjct: 10  LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKN 68

Query: 150 IGGTRCVQIRNWFDYRN--HICIVFEKL-GPSLYDFLRKN-SYRSFPIDLVRELGRQLLE 205
           I     V++    +     H  ++ E     SLY  L +  +    P      + R ++ 
Sbjct: 69  I-----VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG 123

Query: 206 SVAFMHELRLIHTDLKPENILLVSAE 231
            +  + E  ++H ++KP NI+ V  E
Sbjct: 124 GMNHLRENGIVHRNIKPGNIMRVIGE 149

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 90.7 bits (226), Expect = 8e-22
 Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 15/149 (10%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR-------SINKYREAAMIEIDV 141
            +   Y +  ++G G F  V +C      +  A K ++            RE    E+++
Sbjct: 2   MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61

Query: 142 LQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELG 200
           L+ + RH       + + + F+ +  + ++ E + G  L+DFL +        D   +  
Sbjct: 62  LREI-RHP----NIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFL 114

Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVS 229
           +Q+L+ V ++H  R+ H DLKPENI+L+ 
Sbjct: 115 KQILDGVHYLHSKRIAHFDLKPENIMLLD 143

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 91.2 bits (227), Expect = 9e-22
 Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 17/153 (11%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR-------SINKYREAAMIEID 140
           + +   Y I  ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67

Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFL-RKNSYRSFPIDLVRE 198
           +L+++  H++     + + + ++ R  + ++ E + G  L+DFL +K S      +    
Sbjct: 68  ILRQVLHHNV-----ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATS 119

Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAE 231
             +Q+L+ V ++H  ++ H DLKPENI+L+   
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN 152

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 90.9 bits (226), Expect = 1e-21
 Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 8/137 (5%)

Query: 92  PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG 151
            RYR+  K+G G+FG +    D    E VAIK+     K+ +  + E  + + +     G
Sbjct: 9   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHI-ESKIYKMMQ----G 63

Query: 152 GTRCVQIRNWF-DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           G     IR W     ++  +V E LGPSL D L     R F +  V  L  Q++  + ++
Sbjct: 64  GVGIPTIR-WCGAEGDYNVMVMELLGPSLED-LFNFCSRKFSLKTVLLLADQMISRIEYI 121

Query: 211 HELRLIHTDLKPENILL 227
           H    IH D+KP+N L+
Sbjct: 122 HSKNFIHRDVKPDNFLM 138

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 90.3 bits (225), Expect = 1e-21
 Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 15/149 (10%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR----EAAMIEIDVLQ 143
            ++   Y + + +G G++G+V        +   A K    I KY     +    EI++++
Sbjct: 5   GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKK---IPKYFVEDVDRFKQEIEIMK 61

Query: 144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQ 202
            L   +I     +++   F+    I +V E   G  L++ +       F       + + 
Sbjct: 62  SLDHPNI-----IRLYETFEDNTDIYLVMELCTGGELFERVVHKRV--FRESDAARIMKD 114

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAE 231
           +L +VA+ H+L + H DLKPEN L ++  
Sbjct: 115 VLSAVAYCHKLNVAHRDLKPENFLFLTDS 143

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 91.6 bits (228), Expect = 1e-21
 Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 15/152 (9%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR-------SINKYREAAMIEID 140
           + +   Y I  ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67

Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+++   +I     + + + ++ R  + ++ E + G  L+DFL +        +     
Sbjct: 68  ILRQVLHPNI-----ITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEATSF 120

Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAE 231
            +Q+L+ V ++H  ++ H DLKPENI+L+   
Sbjct: 121 IKQILDGVNYLHTKKIAHFDLKPENIMLLDKN 152

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 90.9 bits (226), Expect = 1e-21
 Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 14/149 (9%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI-----EID 140
           E L  +Y++   +G G FG V           VAIK V    I+ + E         E+ 
Sbjct: 39  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 98

Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPS--LYDFLRKNSYRSFPIDLVRE 198
           +L+++      G   +++ +WF+  +   ++ E+  P   L+DF+ +    +   +L R 
Sbjct: 99  LLKKV-SSGFSG--VIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARS 153

Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+LE+V   H   ++H D+K ENIL+
Sbjct: 154 FFWQVLEAVRHCHNCGVLHRDIKDENILI 182

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 91.2 bits (227), Expect = 1e-21
 Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 15/152 (9%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR-------SINKYREAAMIEID 140
           EN+   Y    ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66

Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ +   ++     + +   ++ +  + ++ E + G  L+DFL +        +   E 
Sbjct: 67  ILKEIQHPNV-----ITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEF 119

Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAE 231
            +Q+L  V ++H L++ H DLKPENI+L+   
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRN 151

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 90.3 bits (225), Expect = 1e-21
 Identities = 46/150 (30%), Positives = 82/150 (54%), Gaps = 12/150 (8%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARH 148
            ++ + K+GEGT+G V +  +    E+VA+K +R ++   E     A+ EI +L+ L  H
Sbjct: 4   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL-NH 61

Query: 149 D-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
             I     V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +
Sbjct: 62  PNI-----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           AF H  R++H DLKP+N+L+ +   +K+ D
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLAD 146

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 90.0 bits (224), Expect = 2e-21
 Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 19/162 (11%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV----------RSINKYREAAMI 137
                 Y     +G G    V  C      +  A+KI+            + + REA + 
Sbjct: 13  HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 72

Query: 138 EIDVLQRLARHD-IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDL 195
           E+D+L++++ H  I     +Q+++ ++      +VF+ +    L+D+L +          
Sbjct: 73  EVDILRKVSGHPNI-----IQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKE 125

Query: 196 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            R++ R LLE +  +H+L ++H DLKPENILL     +K+ D
Sbjct: 126 TRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTD 167

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 90.5 bits (225), Expect = 3e-21
 Identities = 37/174 (21%), Positives = 72/174 (41%), Gaps = 18/174 (10%)

Query: 66  PRTGSPPW-RPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKI 124
           P   S    +   +   ++       +  Y +  ++G+G F  V  C         A KI
Sbjct: 2   PHMASMTGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI 61

Query: 125 VRSINK----YREAAMI--EIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GP 177
              IN      R+   +  E  + ++L   +I     V++ +     +   +VF+ + G 
Sbjct: 62  ---INTKKLSARDFQKLEREARICRKLQHPNI-----VRLHDSIQEESFHYLVFDLVTGG 113

Query: 178 SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE 231
            L++ +    +  +         +Q+LES+A+ H   ++H +LKPEN+LL S  
Sbjct: 114 ELFEDIVAREF--YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA 165

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 90.1 bits (224), Expect = 4e-21
 Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 20/155 (12%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR---------EAAMIEI 139
                Y +   +G+G F  V  C + E  +  A+KI   ++  +         E    E 
Sbjct: 21  LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKI---VDVAKFTSSPGLSTEDLKREA 77

Query: 140 DVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFL--RKNSYRSFPIDLV 196
            +   L    I     V++   +     + +VFE + G  L   +  R ++   +   + 
Sbjct: 78  SICHMLKHPHI-----VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVA 132

Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAE 231
               RQ+LE++ + H+  +IH D+KP  +LL S E
Sbjct: 133 SHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKE 167

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 89.2 bits (222), Expect = 4e-21
 Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 11/155 (7%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA-------AMIEIDVLQRL 145
           RY  ++++G G +G V +  D      VA+K VR +              + E+ +L+RL
Sbjct: 10  RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVR-VPNGGGGGGGLPISTVREVALLRRL 68

Query: 146 --ARHD-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
               H  +     V   +  D    + +VFE +   L  +L K      P + +++L RQ
Sbjct: 69  EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 128

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            L  + F+H   ++H DLKPENIL+ S   VK+ D
Sbjct: 129 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLAD 163

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 89.5 bits (222), Expect = 5e-21
 Identities = 37/208 (17%), Positives = 77/208 (37%), Gaps = 52/208 (25%)

Query: 77  DKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR------SINK 130
            ++ ++       L  +Y +   +G+G++G V    +N+ + + AIKI+          K
Sbjct: 11  RENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPK 70

Query: 131 YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYR 189
             E    E+ ++++L   +I      ++   ++   +IC+V E   G  L D L      
Sbjct: 71  DVERIKTEVRLMKKLHHPNI-----ARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDD 125

Query: 190 --------------------------------------SFPIDLVRELGRQLLESVAFMH 211
                                                      L+  + RQ+  ++ ++H
Sbjct: 126 STGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH 185

Query: 212 ELRLIHTDLKPENILLVSAE--YVKVPD 237
              + H D+KPEN L  + +   +K+ D
Sbjct: 186 NQGICHRDIKPENFLFSTNKSFEIKLVD 213

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 90.2 bits (224), Expect = 5e-21
 Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 12/163 (7%)

Query: 70  SPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN 129
           SP    DD D      I   +   +     +G G  G +V          VA+K +  + 
Sbjct: 4   SPSLEQDDGDEETSVVIVGKI--SFCPKDVLGHGAEGTIV-YRGMFDNRDVAVKRI--LP 58

Query: 130 KYREAAMIEIDVLQRLARH-DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSY 188
           +    A  E+ +L+    H ++     ++       R    I  E    +L +++ +  +
Sbjct: 59  ECFSFADREVQLLRESDEHPNV-----IRYFCTEKDRQFQYIAIELCAATLQEYVEQKDF 113

Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE 231
               ++    L +Q    +A +H L ++H DLKP NIL+    
Sbjct: 114 AHLGLE-PITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPN 155

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 88.6 bits (220), Expect = 6e-21
 Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 8/137 (5%)

Query: 92  PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG 151
             Y++  ++GEG+FG + E  +    + VAIK     +   +    E    + L     G
Sbjct: 10  VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRD-EYRTYKLL----AG 64

Query: 152 GTRCVQIRNWF-DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
            T    +  +F     H  +V + LGPSL D L     R F +  V    +Q+L  V  +
Sbjct: 65  CTGIPNVY-YFGQEGLHNVLVIDLLGPSLED-LLDLCGRKFSVKTVAMAAKQMLARVQSI 122

Query: 211 HELRLIHTDLKPENILL 227
           HE  L++ D+KP+N L+
Sbjct: 123 HEKSLVYRDIKPDNFLI 139

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 88.9 bits (221), Expect = 7e-21
 Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 11/145 (7%)

Query: 89  NLTPRYRILSKM-GEGTFGQVVECFDNEKKELVAIKIV-RSINKYREAAMIEIDVLQRLA 146
                Y++   + GEG   +V  C +    +  A+KI+ +     R     E+++L +  
Sbjct: 9   RFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQ 68

Query: 147 RHD-IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
            H  +     +++  +F+  +   +VFEK+ G S+   + K   R F       + + + 
Sbjct: 69  GHRNV-----LELIEFFEEEDRFYLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVA 121

Query: 205 ESVAFMHELRLIHTDLKPENILLVS 229
            ++ F+H   + H DLKPENIL   
Sbjct: 122 SALDFLHNKGIAHRDLKPENILCEH 146

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 90.5 bits (224), Expect = 7e-21
 Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 8/137 (5%)

Query: 92  PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG 151
            ++R+  K+G G+FG++    + +  E VAIK+     K+ +    E  + + L     G
Sbjct: 7   NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLY-ESKIYRILQ----G 61

Query: 152 GTRCVQIRNWF-DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
           GT    +R WF    ++  +V + LGPSL D L     R   +  V  L  Q++  V F+
Sbjct: 62  GTGIPNVR-WFGVEGDYNVLVMDLLGPSLED-LFNFCSRKLSLKTVLMLADQMINRVEFV 119

Query: 211 HELRLIHTDLKPENILL 227
           H    +H D+KP+N L+
Sbjct: 120 HSKSFLHRDIKPDNFLM 136

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 88.6 bits (220), Expect = 1e-20
 Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 22/153 (14%)

Query: 92  PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG 151
            ++ +  K+G G FG +   F   K E  A  +V+   +       E+   QR+A+ D  
Sbjct: 37  NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCI 96

Query: 152 GTRCVQIRN---------WF--------DYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
                + +                     YR    +V E+LG  L     +N   +F   
Sbjct: 97  KKWIERKQLDYLGIPLFYGSGLTEFKGRSYR---FMVMERLGIDLQKISGQN--GTFKKS 151

Query: 195 LVRELGRQLLESVAFMHELRLIHTDLKPENILL 227
            V +LG ++L+ + ++HE   +H D+K  N+LL
Sbjct: 152 TVLQLGIRMLDVLEYIHENEYVHGDIKAANLLL 184

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 89.5 bits (222), Expect = 1e-20
 Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 16/151 (10%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLA 146
           ++L         +G G+ G VV    + +   VA+K    +   + + A++EI +L    
Sbjct: 11  QSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKR---MLIDFCDIALMEIKLLTESD 66

Query: 147 RHD-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELG----- 200
            H  +     ++          + I  E    +L D +   +     + L +E       
Sbjct: 67  DHPNV-----IRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLL 121

Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAE 231
           RQ+   VA +H L++IH DLKP+NIL+ ++ 
Sbjct: 122 RQIASGVAHLHSLKIIHRDLKPQNILVSTSS 152

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 90.1 bits (223), Expect = 1e-20
 Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 10/154 (6%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHD- 149
            + +  ++G G FG V+     +  E VAIK  R     K RE   +EI ++++L  H  
Sbjct: 15  PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL-NHPN 73

Query: 150 -IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRS-FPIDLVRELGRQLLES 206
            +               +   +  E   G  L  +L +           +R L   +  +
Sbjct: 74  VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 133

Query: 207 VAFMHELRLIHTDLKPENILLVSAE---YVKVPD 237
           + ++HE R+IH DLKPENI+L         K+ D
Sbjct: 134 LRYLHENRIIHRDLKPENIVLQPGPQRLIHKIID 167

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 89.3 bits (222), Expect = 1e-20
 Identities = 32/149 (21%), Positives = 66/149 (44%), Gaps = 11/149 (7%)

Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI-EIDVLQ 143
               T  Y++  ++G+G F  V  C      +  A  I+  + ++      +  E  + +
Sbjct: 6   CTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICR 65

Query: 144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQ 202
            L   +I     V++ +      H  ++F+ + G  L++ +    Y  +         +Q
Sbjct: 66  LLKHPNI-----VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY--YSEADASHCIQQ 118

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAE 231
           +LE+V   H++ ++H +LKPEN+LL S  
Sbjct: 119 ILEAVLHCHQMGVVHRNLKPENLLLASKL 147

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 88.1 bits (219), Expect = 1e-20
 Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 13/134 (9%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARHD-IGGTRCVQI 158
           GEG+F    +C   +  +  A+KI   I+K  EA    EI  L+    H  I     V++
Sbjct: 20  GEGSFSICRKCVHKKSNQAFAVKI---ISKRMEANTQKEITALKLCEGHPNI-----VKL 71

Query: 159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIH 217
              F  + H  +V E L G  L++  R    + F       + R+L+ +V+ MH++ ++H
Sbjct: 72  HEVFHDQLHTFLVMELLNGGELFE--RIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVH 129

Query: 218 TDLKPENILLVSAE 231
            DLKPEN+L     
Sbjct: 130 RDLKPENLLFTDEN 143

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 87.8 bits (218), Expect = 1e-20
 Identities = 38/158 (24%), Positives = 61/158 (38%), Gaps = 15/158 (9%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHD- 149
            +  +  +G G FG V E  +       AIK +R  +    RE  M E+  L +L  H  
Sbjct: 6   DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-EHPG 64

Query: 150 -------IGGTRCVQIRNWFDYRNHICIVFEKL--GPSLYDFLRKNSYRSFP-IDLVREL 199
                         +       + ++ I  + L    +L D++            +   +
Sbjct: 65  IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQ-LCRKENLKDWMNGRCTIEERERSVCLHI 123

Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
             Q+ E+V F+H   L+H DLKP NI     + VKV D
Sbjct: 124 FLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGD 161

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 89.0 bits (221), Expect = 2e-20
 Identities = 36/157 (22%), Positives = 73/157 (46%), Gaps = 22/157 (14%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--------------SINKYRE 133
             +   Y  + K+G G +G+V+ C +       AIK+++              +I K+ E
Sbjct: 32  GKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHE 91

Query: 134 AAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFP 192
               EI +L+ L   +I     +++ + F+ + +  +V E   G  L++ +       F 
Sbjct: 92  EIYNEISLLKSLDHPNI-----IKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK--FD 144

Query: 193 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS 229
                 + +Q+L  + ++H+  ++H D+KPENILL +
Sbjct: 145 ECDAANIMKQILSGICYLHKHNIVHRDIKPENILLEN 181

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 87.9 bits (218), Expect = 2e-20
 Identities = 30/158 (18%), Positives = 59/158 (37%), Gaps = 29/158 (18%)

Query: 92  PRYRILSKMGEGTFGQV--------VECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQ 143
            ++++ S       G +        + C    +K+  ++K+     +       E +  Q
Sbjct: 42  RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRL----FNEQNFFQ 97

Query: 144 RLARHD-------IGGTRCVQIRN--WF-----DYRNHICIVFEKLGPSLYDFLRKNSYR 189
           R A+         +  T  + I     F      YR    +V   LG SL   L  +   
Sbjct: 98  RAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYR---FLVLPSLGRSLQSALDVSPKH 154

Query: 190 SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL 227
                 V ++  +LL+++ F+HE   +H ++  ENI +
Sbjct: 155 VLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFV 192

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 88.2 bits (219), Expect = 2e-20
 Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 10/166 (6%)

Query: 70  SPPWRPDDKDGHYVFAIGENLTPRYRILSK--MGEGTFGQVVECFDNEKKELVAIKIVR- 126
             P  P   D   V A    +   Y +     +G G FGQV +C +      +A KI++ 
Sbjct: 65  DIPAPPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKT 124

Query: 127 SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRK 185
              K +E    EI V+ +L  H       +Q+ + F+ +N I +V E + G  L+D +  
Sbjct: 125 RGMKDKEEVKNEISVMNQL-DHA----NLIQLYDAFESKNDIVLVMEYVDGGELFDRIID 179

Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE 231
            SY +          +Q+ E +  MH++ ++H DLKPENIL V+ +
Sbjct: 180 ESY-NLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRD 224

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 86.8 bits (216), Expect = 3e-20
 Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 17/149 (11%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR------EAAMIEIDV 141
              +  Y +  ++G+G F  V  C         A KI   IN  +      +    E  +
Sbjct: 2   TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI---INTKKLSARDFQKLEREARI 58

Query: 142 LQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELG 200
            ++L   +I     V++ +     +   +VF+ + G  L++ +    +  +         
Sbjct: 59  CRKLQHPNI-----VRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCI 111

Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVS 229
           +Q+LES+A+ H   ++H +LKPEN+LL S
Sbjct: 112 QQILESIAYCHSNGIVHRNLKPENLLLAS 140

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 87.4 bits (217), Expect = 3e-20
 Identities = 35/151 (23%), Positives = 70/151 (46%), Gaps = 16/151 (10%)

Query: 88  ENLTPRYRILSKM-GEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA 146
             +T  Y++  ++ G G  G+V+ECF     +  A+K+   +      A  E+D   + +
Sbjct: 24  YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKL---LYD-SPKARQEVDHHWQAS 79

Query: 147 RHD-IGGTRCVQIRNWFD----YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELG 200
               I     V I + ++     +  + I+ E + G  L+  +++   ++F      E+ 
Sbjct: 80  GGPHI-----VCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIM 134

Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVSAE 231
           R +  ++ F+H   + H D+KPEN+L  S E
Sbjct: 135 RDIGTAIQFLHSHNIAHRDVKPENLLYTSKE 165

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 87.0 bits (216), Expect = 3e-20
 Identities = 36/149 (24%), Positives = 76/149 (51%), Gaps = 16/149 (10%)

Query: 88  ENLTPRYRILSKM-GEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA 146
             +   Y++ S++ G G  G+V++ F+   +E  A+K+++   K R     E+++  R +
Sbjct: 13  NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRAS 68

Query: 147 RHD-IGGTRCVQIRNWFD----YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELG 200
           +   I     V+I + ++     R  + IV E L G  L+  ++    ++F      E+ 
Sbjct: 69  QCPHI-----VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 123

Query: 201 RQLLESVAFMHELRLIHTDLKPENILLVS 229
           + + E++ ++H + + H D+KPEN+L  S
Sbjct: 124 KSIGEAIQYLHSINIAHRDVKPENLLYTS 152

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 87.0 bits (216), Expect = 3e-20
 Identities = 33/155 (21%), Positives = 58/155 (37%), Gaps = 17/155 (10%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY-REAAMIEIDVLQRLARHD-I 150
            Y  + K+GEG F  V            A+K +    +  RE A  E D+ +    H  I
Sbjct: 30  HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLF-NHPNI 88

Query: 151 GGTRCVQIRNWF----DYRNHICIVFE--KLGPSLYDFL--RKNSYRSFPIDLVRELGRQ 202
                +++  +       ++   ++    K G +L++ +   K+       D +  L   
Sbjct: 89  -----LRLVAYCLRERGAKHEAWLLLPFFKRG-TLWNEIERLKDKGNFLTEDQILWLLLG 142

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           +   +  +H     H DLKP NILL       + D
Sbjct: 143 ICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMD 177

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 86.6 bits (215), Expect = 4e-20
 Identities = 35/167 (20%), Positives = 69/167 (41%), Gaps = 12/167 (7%)

Query: 70  SPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RS 127
            PP  P            E     YR+   +G+G FG V        +  VAIK++    
Sbjct: 9   GPPAPPGTPTPPPGGKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNR 68

Query: 128 INKYREAAMI-----EIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPS--LY 180
           +  +   +       E+ +L ++     G    +++ +WF+ +    +V E+  P+  L+
Sbjct: 69  VLGWSPLSDSVTCPLEVALLWKV-GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLF 127

Query: 181 DFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL 227
           D++ +           R    Q++ ++   H   ++H D+K ENIL+
Sbjct: 128 DYITEKGP--LGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILI 172

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 87.9 bits (218), Expect = 4e-20
 Identities = 45/207 (21%), Positives = 85/207 (41%), Gaps = 27/207 (13%)

Query: 29  PPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGE 88
           P P P P   P             P       F     ++G    +    D + V    +
Sbjct: 11  PVPFPAPAPPPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIIDDYKVT--SQ 68

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH 148
            L          G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++ 
Sbjct: 69  VL----------GLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQC 114

Query: 149 D-IGGTRCVQIRNWFD----YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQ 202
             I     V+I + ++     R  + IV E L G  L+  ++    ++F      E+ + 
Sbjct: 115 PHI-----VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 169

Query: 203 LLESVAFMHELRLIHTDLKPENILLVS 229
           + E++ ++H + + H D+KPEN+L  S
Sbjct: 170 IGEAIQYLHSINIAHRDVKPENLLYTS 196

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 86.6 bits (215), Expect = 4e-20
 Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 23/164 (14%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMI-----E 138
           + L   Y +   +G G  G+V   F+ +  + VAIKI+     +I   REA        E
Sbjct: 6   KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65

Query: 139 IDVLQRLARH-DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLV 196
           I++L++L  H  I     ++I+N+FD  ++  IV E + G  L+D +  N          
Sbjct: 66  IEILKKL-NHPCI-----IKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKR--LKEATC 116

Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY---VKVPD 237
           +    Q+L +V ++HE  +IH DLKPEN+LL S E    +K+ D
Sbjct: 117 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITD 160

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 87.1 bits (216), Expect = 8e-20
 Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 21/163 (12%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV-------RSINKYREAAMI--E 138
           + L   Y +   +G G  G+V   F+ +  + VAI+I+        S  +   A  +  E
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 190

Query: 139 IDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVR 197
           I++L++L  H       ++I+N+FD      IV E + G  L+D +  N          +
Sbjct: 191 IEILKKL-NHP----CIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKR--LKEATCK 242

Query: 198 ELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY---VKVPD 237
               Q+L +V ++HE  +IH DLKPEN+LL S E    +K+ D
Sbjct: 243 LYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITD 285

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 84.9 bits (211), Expect = 2e-19
 Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 14/151 (9%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARH 148
           RY     +G+G F +  E  D + KE+ A KIV    + K  +   +  EI + + L  H
Sbjct: 16  RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AH 74

Query: 149 -DIGGTRCVQIRNWFDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
             +     V    +F+  + + +V E     SL +  ++   ++      R   RQ++  
Sbjct: 75  QHV-----VGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLG 127

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
             ++H  R+IH DLK  N+ L     VK+ D
Sbjct: 128 CQYLHRNRVIHRDLKLGNLFLNEDLEVKIGD 158

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 85.2 bits (211), Expect = 2e-19
 Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 8/153 (5%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHD-- 149
           R R+   + EG F  V E  D       A+K + S  +    A + E+  +++L+ H   
Sbjct: 29  RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88

Query: 150 --IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYR-SFPIDLVRELGRQLLES 206
                   +        +    ++ E     L +FL+K   R     D V ++  Q   +
Sbjct: 89  VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148

Query: 207 VAFMHELR--LIHTDLKPENILLVSAEYVKVPD 237
           V  MH  +  +IH DLK EN+LL +   +K+ D
Sbjct: 149 VQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCD 181

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 84.1 bits (209), Expect = 2e-19
 Identities = 31/151 (20%), Positives = 71/151 (47%), Gaps = 13/151 (8%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARH 148
            +++ + +G+G+F  V           VAIK++  +++ K      +  E+ +  +L +H
Sbjct: 12  DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KH 70

Query: 149 -DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
             I     +++ N+F+  N++ +V E      +  +L+    + F  +  R    Q++  
Sbjct: 71  PSI-----LELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITG 124

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           + ++H   ++H DL   N+LL     +K+ D
Sbjct: 125 MLYLHSHGILHRDLTLSNLLLTRNMNIKIAD 155

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 85.5 bits (212), Expect = 3e-19
 Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 28/180 (15%)

Query: 66  PRTGSPPWRPDDKDGHYVFAI--------GENLTPRYRILSKMGEGTFGQVVECFDNEKK 117
           P          DKDG  V  +               Y     +G G+FG V +    +  
Sbjct: 20  PSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSG 79

Query: 118 ELVAIKIVRSINKY--REAAMIEIDVLQRLARHDIGGTRCVQIRNWF------DYRNHIC 169
           ELVAIK V    ++  R     E+ ++++L  H       V++R +F          ++ 
Sbjct: 80  ELVAIKKVLQDKRFKNR-----ELQIMRKL-DHC----NIVRLRYFFYSSGEKKDEVYLN 129

Query: 170 IVFEKLGPSLYDFLR--KNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL 227
           +V + +  ++Y   R    + ++ P+  V+    QL  S+A++H   + H D+KP+N+LL
Sbjct: 130 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 189

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 84.6 bits (210), Expect = 3e-19
 Identities = 43/153 (28%), Positives = 81/153 (52%), Gaps = 14/153 (9%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARH 148
           RYR ++K+GEGT+G+V +  D    E VAIK +R +    E     A+ E+ +L+ L +H
Sbjct: 35  RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIR-LEHEEEGVPGTAIREVSLLKEL-QH 92

Query: 149 D-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
             I     +++++   + + + ++FE     L  ++  +      + +++    QL+  V
Sbjct: 93  RNI-----IELKSVIHHNHRLHLIFEYAENDLKKYM--DKNPDVSMRVIKSFLYQLINGV 145

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
            F H  R +H DLKP+N+LL  ++  + P  K+
Sbjct: 146 NFCHSRRCLHRDLKPQNLLLSVSDASETPVLKI 178

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 84.4 bits (209), Expect = 3e-19
 Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 12/136 (8%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
                 ++G G+FG+V    D +     A+K VR         + E+     L       
Sbjct: 59  WMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR----LEVFRVEELVACAGL-SSP--- 110

Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
            R V +         + I  E L G SL   +++      P D       Q LE + ++H
Sbjct: 111 -RIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLH 167

Query: 212 ELRLIHTDLKPENILL 227
             R++H D+K +N+LL
Sbjct: 168 TRRILHGDVKADNVLL 183

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 84.3 bits (209), Expect = 3e-19
 Identities = 50/215 (23%), Positives = 80/215 (37%), Gaps = 38/215 (17%)

Query: 29  PPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDDKDGHYVFAIGE 88
           P P  P K              G+P  A       A P    P    D +          
Sbjct: 2   PAPADPGK-------------AGVPGVAAPGAPAAAPPAKEIPEVLVDPRSRR------- 41

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQR 144
               RY     +G+G F +  E  D + KE+ A KIV    + K  +   +  EI + + 
Sbjct: 42  ----RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRS 97

Query: 145 LARH-DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           L  H  +     V    +F+  + + +V E     SL +  ++   ++      R   RQ
Sbjct: 98  L-AHQHV-----VGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQ 149

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           ++    ++H  R+IH DLK  N+ L     VK+ D
Sbjct: 150 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGD 184

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 83.7 bits (208), Expect = 4e-19
 Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 13/150 (8%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARH 148
           +Y  L K+GEGT+G V +  + E  E+VA+K VR ++   E    +A+ EI +L+ L +H
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVR-LDDDDEGVPSSALREICLLKEL-KH 60

Query: 149 D-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
             I     V++ +       + +VFE     L  +    +      ++V+    QLL+ +
Sbjct: 61  KNI-----VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGL 114

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            F H   ++H DLKP+N+L+     +K+ +
Sbjct: 115 GFCHSRNVLHRDLKPQNLLINRNGELKLAN 144

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 83.8 bits (208), Expect = 5e-19
 Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 9/153 (5%)

Query: 93  RYRILSKMGEGTFGQVVECFD-NEKKELVAIKIVRSINKYRE----AAMIEIDVLQRL-- 145
           +Y  ++++GEG +G+V +  D       VA+K VR +    E    + + E+ VL+ L  
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEEGMPLSTIREVAVLRHLET 70

Query: 146 ARHD-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
             H  +     V   +  D    + +VFE +   L  +L K      P + ++++  QLL
Sbjct: 71  FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 130

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
             + F+H  R++H DLKP+NIL+ S+  +K+ D
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLAD 163

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 84.0 bits (208), Expect = 5e-19
 Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 24/159 (15%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR--EAAMI----------EID 140
           +Y  +S +G G FG V    D EK + V +K    I K +  E   I          EI 
Sbjct: 25  KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKF---IKKEKVLEDCWIEDPKLGKVTLEIA 81

Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPS--LYDFLRKNSYRSFPIDLVRE 198
           +L R+  H       +++ + F+ +    +V EK G    L+ F+ ++        L   
Sbjct: 82  ILSRV-EHA----NIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASY 134

Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           + RQL+ +V ++    +IH D+K ENI++     +K+ D
Sbjct: 135 IFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLID 173

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 83.1 bits (206), Expect = 5e-19
 Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 11/142 (7%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVRSINK-YREAAMIEIDVLQRLARHDIGGTRCVQIR 159
           G+GT+G V    D   +  +AIK +   +  Y +    EI + + L +H       VQ  
Sbjct: 31  GKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL-KHK----NIVQYL 85

Query: 160 NWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPID--LVRELGRQLLESVAFMHELRLI 216
             F     I I  E++ G SL   L ++ +     +   +    +Q+LE + ++H+ +++
Sbjct: 86  GSFSENGFIKIFMEQVPGGSLSALL-RSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 144

Query: 217 HTDLKPENILLVSAE-YVKVPD 237
           H D+K +N+L+ +    +K+ D
Sbjct: 145 HRDIKGDNVLINTYSGVLKISD 166

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 82.6 bits (205), Expect = 8e-19
 Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 14/151 (9%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARH 148
            + I   +G+G FG V    + + K ++A+K++    + K      +  EI++   L RH
Sbjct: 15  DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RH 73

Query: 149 -DIGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
            +I     +++ N+F  R  I ++ E      LY  L+K+    F          +L ++
Sbjct: 74  PNI-----LRMYNYFHDRKRIYLMLEFAPRGELYKELQKH--GRFDEQRSATFMEELADA 126

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           + + HE ++IH D+KPEN+L+     +K+ D
Sbjct: 127 LHYCHERKVIHRDIKPENLLMGYKGELKIAD 157

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 83.7 bits (207), Expect = 9e-19
 Identities = 34/170 (20%), Positives = 64/170 (37%), Gaps = 33/170 (19%)

Query: 84  FAIGENLT----PRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSINKYREA 134
           FA+GE +T      +++   +G+G FG +     N            +K+  S N     
Sbjct: 23  FAVGEIITDMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLF- 81

Query: 135 AMIEIDVLQRLARHDIGGTRCVQIRN---------WF--------DYRNHICIVFEKLGP 177
              E+   QR A+ +         +                     YR    ++ ++ G 
Sbjct: 82  --TELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYR---FMIMDRFGS 136

Query: 178 SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL 227
            L      N+ + F    V +L  ++L+ + ++HE   +H D+K  N+LL
Sbjct: 137 DLQKIYEANA-KRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLL 185

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 81.8 bits (203), Expect = 1e-18
 Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 14/150 (9%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARH 148
           +Y  L K+GEGT+G V +  +N   E  A+K +R + K  E      + EI +L+ L +H
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIR-LEKEDEGIPSTTIREISILKEL-KH 59

Query: 149 D-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
             I     V++ +    +  + +VFE L   L   L             +    QLL  +
Sbjct: 60  SNI-----VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGI 113

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           A+ H+ R++H DLKP+N+L+     +K+ D
Sbjct: 114 AYCHDRRVLHRDLKPQNLLINREGELKIAD 143

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 81.9 bits (203), Expect = 2e-18
 Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 14/151 (9%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARH 148
            + I   +G+G FG V    + + K ++A+K++    + K      +  E+++   L RH
Sbjct: 10  DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RH 68

Query: 149 -DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
            +I     +++  +F     + ++ E     ++Y  L+K     F          +L  +
Sbjct: 69  PNI-----LRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANA 121

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           +++ H  R+IH D+KPEN+LL SA  +K+ D
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIAD 152

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 80.7 bits (200), Expect = 5e-18
 Identities = 46/150 (30%), Positives = 77/150 (51%), Gaps = 14/150 (9%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARH 148
           +Y+ L K+GEGT+G V +  D+ +  +VA+K +R ++   E     A+ EI +L+ L  H
Sbjct: 22  KYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIR-LDAEDEGIPSTAIREISLLKEL-HH 78

Query: 149 D-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
             I     V + +       + +VFE +   L   L +N         ++    QLL  V
Sbjct: 79  PNI-----VSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGV 132

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           A  H+ R++H DLKP+N+L+ S   +K+ D
Sbjct: 133 AHCHQHRILHRDLKPQNLLINSDGALKLAD 162

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 80.0 bits (198), Expect = 6e-18
 Identities = 32/159 (20%), Positives = 64/159 (40%), Gaps = 20/159 (12%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD 149
            Y +L  +G G++G+  +       +++  K +   +     ++  + E+++L+ L +H 
Sbjct: 7   DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-KHP 65

Query: 150 -IGGTRCVQIRNWFDYR--NHICIVFEKL-GPSLYDFLR--KNSYRSFPIDLVRELGRQL 203
            I     V+  +    R    + IV E   G  L   +       +    + V  +  QL
Sbjct: 66  NI-----VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 120

Query: 204 LESVAFMHELRL-----IHTDLKPENILLVSAEYVKVPD 237
             ++   H         +H DLKP N+ L   + VK+ D
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGD 159

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 80.3 bits (199), Expect = 7e-18
 Identities = 43/154 (27%), Positives = 82/154 (53%), Gaps = 17/154 (11%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARH 148
           +++ L K+G GT+  V +  +      VA+K V+  ++  E     A+ EI +++ L +H
Sbjct: 6   QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE--EGTPSTAIREISLMKEL-KH 62

Query: 149 D-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLR----KNSYRSFPIDLVRELGRQL 203
           + I     V++ +     N + +VFE +   L  ++      N+ R   ++LV+    QL
Sbjct: 63  ENI-----VRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQL 117

Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           L+ +AF HE +++H DLKP+N+L+     +K+ D
Sbjct: 118 LQGLAFCHENKILHRDLKPQNLLINKRGQLKLGD 151

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 80.3 bits (199), Expect = 1e-17
 Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 14/142 (9%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA------AMIEIDVLQRLA 146
           RY  L  +GEG F  V +  D    ++VAIK ++  ++          A+ EI +LQ L 
Sbjct: 11  RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL- 69

Query: 147 RHD-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
            H  I     + + + F ++++I +VF+ +   L   ++ NS        ++      L+
Sbjct: 70  SHPNI-----IGLLDAFGHKSNISLVFDFMETDLEVIIKDNS-LVLTPSHIKAYMLMTLQ 123

Query: 206 SVAFMHELRLIHTDLKPENILL 227
            + ++H+  ++H DLKP N+LL
Sbjct: 124 GLEYLHQHWILHRDLKPNNLLL 145

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 79.0 bits (195), Expect = 2e-17
 Identities = 35/154 (22%), Positives = 74/154 (48%), Gaps = 9/154 (5%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD--- 149
            + ++  +G GT+GQV +    +  +L AIK++       E    EI++L++ + H    
Sbjct: 25  IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIA 84

Query: 150 --IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
              G       +N     + + +V E     S+ D ++     +   + +  + R++L  
Sbjct: 85  TYYG---AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG 141

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           ++ +H+ ++IH D+K +N+LL     VK+ D+ V
Sbjct: 142 LSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGV 175

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 79.3 bits (195), Expect = 3e-17
 Identities = 22/175 (12%), Positives = 50/175 (28%), Gaps = 30/175 (17%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--------INKYREAAMIEIDVLQR 144
           + +++  +  G    V    D E+ E  A+K+           + +  EA      +L  
Sbjct: 63  KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGE 122

Query: 145 LARHDIGGTRCVQIRNWFDYRNH-----------------ICIVFEKLGPSLYDFLRKNS 187
                    R +   +    ++                    ++       L        
Sbjct: 123 SPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD 182

Query: 188 YRS-----FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           +         I  +  L  QL+   A +    L+H    P+N+ ++    + + D
Sbjct: 183 FVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGD 237

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 78.4 bits (194), Expect = 4e-17
 Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 14/150 (9%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYRE----AAMIEIDVLQRLARH 148
            Y  L K+GEGT+  V +        LVA+K +R  ++  E     A+ E+ +L+ L +H
Sbjct: 3   TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDL-KH 59

Query: 149 D-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
             I     V + +       + +VFE L   L  +L  +      +  V+    QLL  +
Sbjct: 60  ANI-----VTLHDIIHTEKSLTLVFEYLDKDLKQYL-DDCGNIINMHNVKLFLFQLLRGL 113

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           A+ H  +++H DLKP+N+L+     +K+ D
Sbjct: 114 AYCHRQKVLHRDLKPQNLLINERGELKLAD 143

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 78.1 bits (193), Expect = 6e-17
 Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 13/150 (8%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARH 148
            Y I   +GEG+FG+V      + ++ VA+K +  + + K      +  EI  L +L RH
Sbjct: 10  PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYL-KLLRH 68

Query: 149 -DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
             I     +++ +       I +V E  G  L+D++ +   +    D  R   +Q++ ++
Sbjct: 69  PHI-----IKLYDVITTPTDIVMVIEYAGGELFDYIVEK--KRMTEDEGRRFFQQIICAI 121

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            + H  +++H DLKPEN+LL     VK+ D
Sbjct: 122 EYCHRHKIVHRDLKPENLLLDDNLNVKIAD 151

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 78.1 bits (193), Expect = 9e-17
 Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 21/151 (13%)

Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY--REAAMIEIDVLQR 144
           GE     Y     +G G+FG V +    E  E VAIK V    ++  RE     + +++ 
Sbjct: 35  GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRE-----LQIMRI 88

Query: 145 LARHDIGGTRCVQIRNWF------DYRNHICIVFEKLGPSLYDFLR--KNSYRSFPIDLV 196
           + +H       V ++ +F           + +V E +  ++Y   R      ++ P+ L+
Sbjct: 89  V-KHP----NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLI 143

Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILL 227
           +    QLL S+A++H + + H D+KP+N+LL
Sbjct: 144 KLYMYQLLRSLAYIHSIGICHRDIKPQNLLL 174

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 77.0 bits (190), Expect = 9e-17
 Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 19/176 (10%)

Query: 74  RPDDKDGHYVFAIGENLTPRY-RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--- 129
           + DD +     A+G +   R+ +   ++G G+F  V +  D E    VA   ++      
Sbjct: 7   QQDDIEELETKAVGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK 66

Query: 130 KYREAAMIEIDVLQRLARHDIGGTRCVQ-IRNWFDY---RNHICIVFEKL-GPSLYDFLR 184
             R+    E ++L+ L +H       V+   +W      +  I +V E +   +L  +L+
Sbjct: 67  SERQRFKEEAEMLKGL-QHP----NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLK 121

Query: 185 KNSYRSFPIDLVRELGRQLLESVAFMHE--LRLIHTDLKPENILLVSAE-YVKVPD 237
           +  ++   I ++R   RQ+L+ + F+H     +IH DLK +NI +      VK+ D
Sbjct: 122 R--FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGD 175

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 77.3 bits (191), Expect = 1e-16
 Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 12/141 (8%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH 148
                Y+++ K+G G + +V E  +    E V +KI++ + K +     EI +L+ L   
Sbjct: 33  GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK--IKREIKILENLRGG 90

Query: 149 D--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
              I     V+            +VFE +  +  DF  K  Y++     +R    ++L++
Sbjct: 91  PNIITLADIVKDPVSRTP----ALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKA 142

Query: 207 VAFMHELRLIHTDLKPENILL 227
           + + H + ++H D+KP N+++
Sbjct: 143 LDYCHSMGIMHRDVKPHNVMI 163

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 76.8 bits (189), Expect = 4e-16
 Identities = 41/169 (24%), Positives = 66/169 (39%), Gaps = 10/169 (5%)

Query: 66  PRTGSPPWRPDDKDGHYVFAIGE---NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAI 122
            + G    +                  +  RY I   +G G++G V E +D  +K +VAI
Sbjct: 24  QQEGQQRKQHHSSKPTASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAI 83

Query: 123 K-IVRSINKYREAAMI--EIDVLQRLARHD-IGGTRCVQIRNWFDYRNHICIVFEKLGPS 178
           K I+R      +   I  EI +L RL  HD +     + I    +  + + +V E     
Sbjct: 84  KKILRVFEDLIDCKRILREIAILNRL-NHDHVVKVLDIVIPKDVEKFDELYVVLEIADSD 142

Query: 179 LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL 227
                R           ++ L   LL  V ++H   ++H DLKP N L+
Sbjct: 143 FKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLV 189

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 75.5 bits (186), Expect = 7e-16
 Identities = 38/172 (22%), Positives = 69/172 (40%), Gaps = 32/172 (18%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY--RE------------ 133
           E  + +Y +   +G G+FG V E FD E  +  A+K V    +Y  RE            
Sbjct: 3   ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNI 62

Query: 134 ----------------AAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGP 177
                                 D  +   +++        +        ++ ++ E +  
Sbjct: 63  IKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD 122

Query: 178 SLYDFLR--KNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL 227
           +L+  L+    S RS P++L+     QL  +V F+H L + H D+KP+N+L+
Sbjct: 123 TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLV 174

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 73.8 bits (182), Expect = 2e-15
 Identities = 36/143 (25%), Positives = 72/143 (50%), Gaps = 11/143 (7%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA----AMIEIDVLQRLARH 148
           +Y  L+K+G+GTFG+V +    +  + VA+K V  +   +E     A+ EI +LQ L +H
Sbjct: 18  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL-MENEKEGFPITALREIKILQLL-KH 75

Query: 149 D-IGGTRCV---QIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
           + +     +   +   +   +  I +VF+     L   L  N    F +  ++ + + LL
Sbjct: 76  ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLL 134

Query: 205 ESVAFMHELRLIHTDLKPENILL 227
             + ++H  +++H D+K  N+L+
Sbjct: 135 NGLYYIHRNKILHRDMKAANVLI 157

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 73.9 bits (182), Expect = 2e-15
 Identities = 45/149 (30%), Positives = 65/149 (43%), Gaps = 12/149 (8%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH-DIG 151
           RY  +  +G G FG      D   KELVA+K +       E    EI    R  RH +I 
Sbjct: 21  RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINH-RSLRHPNI- 78

Query: 152 GTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               V+ +       H+ I+ E   G  LY+ +       F  D  R   +QLL  V++ 
Sbjct: 79  ----VRFKEVILTPTHLAIIMEYASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYC 132

Query: 211 HELRLIHTDLKPENILLVSAEY--VKVPD 237
           H +++ H DLK EN LL  +    +K+ D
Sbjct: 133 HSMQICHRDLKLENTLLDGSPAPRLKICD 161

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 73.0 bits (180), Expect = 2e-15
 Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 14/151 (9%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARH 148
            Y +   +G GTFG+V           VA+KI+  + I        I  EI  L +L RH
Sbjct: 12  HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL-KLFRH 70

Query: 149 -DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
             I     +++           +V E + G  L+D++ K+          R L +Q+L +
Sbjct: 71  PHI-----IKLYQVISTPTDFFMVMEYVSGGELFDYICKH--GRVEEMEARRLFQQILSA 123

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           V + H   ++H DLKPEN+LL +    K+ D
Sbjct: 124 VDYCHRHMVVHRDLKPENVLLDAHMNAKIAD 154

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 73.2 bits (180), Expect = 3e-15
 Identities = 32/171 (18%), Positives = 70/171 (40%), Gaps = 33/171 (19%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI------------- 137
            YRI+  + +G F +++ C   +  +  A+K      + K R+                 
Sbjct: 32  DYRIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDD 89

Query: 138 ---EIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSY----- 188
              E+ ++  + +++     C+         + + I++E +   S+  F           
Sbjct: 90  FKNELQIITDI-KNE----YCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY 144

Query: 189 -RSFPIDLVRELGRQLLESVAFMHELRLI-HTDLKPENILLVSAEYVKVPD 237
               PI +++ + + +L S +++H  + I H D+KP NIL+     VK+ D
Sbjct: 145 TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSD 195

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 73.1 bits (180), Expect = 3e-15
 Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 19/159 (11%)

Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR------EAAMIEID 140
            +     YR+L  +G+G F +V           VAIKI   I+K +      +    E+ 
Sbjct: 10  EQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKI---IDKTQLNPTSLQKLFREVR 66

Query: 141 VLQRLARH-DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRE 198
           +++ L  H +I     V++    +    + ++ E   G  ++D+L  +          R 
Sbjct: 67  IMKIL-NHPNI-----VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARS 118

Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
             RQ++ +V + H+ R++H DLK EN+LL +   +K+ D
Sbjct: 119 KFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIAD 157

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 72.8 bits (179), Expect = 3e-15
 Identities = 32/155 (20%), Positives = 68/155 (43%), Gaps = 10/155 (6%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLA 146
            +         K+GEG+ G V    +      VA+K++    + R   +  E+ +++   
Sbjct: 41  GDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ 100

Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
             ++     V++   +     + ++ E L G +L D + +       I  V      +L+
Sbjct: 101 HFNV-----VEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATV---CEAVLQ 152

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           ++A++H   +IH D+K ++ILL     VK+ D+  
Sbjct: 153 ALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGF 187

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 73.6 bits (180), Expect = 4e-15
 Identities = 26/182 (14%), Positives = 58/182 (31%), Gaps = 34/182 (18%)

Query: 90  LTPRYRILSK---MGEGTFGQVVECFDNEKKELVAIKIVRSINK---------YREAAMI 137
           L  R R L +   +G+      +E  D E  E   + +     +           E   +
Sbjct: 73  LGERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRL 132

Query: 138 EIDVLQRLARHDIGGTRCVQIRNWFDYRNH-----------------ICIVFEKLGPSLY 180
            +    +  +      R +   +                           ++ ++  +L 
Sbjct: 133 RLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQ 192

Query: 181 DFL-----RKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV 235
            F        ++++S       +L  Q++  +A +H   L+HT L+P +I+L     V +
Sbjct: 193 TFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFL 252

Query: 236 PD 237
             
Sbjct: 253 TG 254

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 72.7 bits (179), Expect = 4e-15
 Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 10/155 (6%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLA 146
            +   +Y    K+G+G  G V    D    + VAI+ +    + ++  +I EI V++   
Sbjct: 16  GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK 75

Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
             +I     V   + +   + + +V E L G SL D + +       I  V    R+ L+
Sbjct: 76  NPNI-----VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQ 127

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           ++ F+H  ++IH D+K +NILL     VK+ D+  
Sbjct: 128 ALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGF 162

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 72.3 bits (178), Expect = 6e-15
 Identities = 37/156 (23%), Positives = 78/156 (50%), Gaps = 20/156 (12%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAM---IEIDVLQRLAR 147
           +Y +   +GEG++G+V E  D+E     A+KI+  + + +          EI +L+RL R
Sbjct: 6   KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-R 64

Query: 148 H-DIGGTRCVQIRN--WFDYRNHICIVFE--KLGPS-LYDFLRKNSYRSFPIDLVRELGR 201
           H ++     +Q+ +  + + +  + +V E    G   + D + +   + FP+        
Sbjct: 65  HKNV-----IQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPE---KRFPVCQAHGYFC 116

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           QL++ + ++H   ++H D+KP N+LL +   +K+  
Sbjct: 117 QLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISA 152

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 72.1 bits (177), Expect = 9e-15
 Identities = 38/157 (24%), Positives = 65/157 (41%), Gaps = 10/157 (6%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI----EIDVLQ 143
           ++    +  L ++G G+FG V    D    E+VAIK +    K           E+  LQ
Sbjct: 50  DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 109

Query: 144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQL 203
           +L   +      +Q R  +   +   +V E    S  D L  +  +      +  +    
Sbjct: 110 KLRHPNT-----IQYRGCYLREHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGA 163

Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           L+ +A++H   +IH D+K  NILL     VK+ D+  
Sbjct: 164 LQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGS 200

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 71.6 bits (176), Expect = 9e-15
 Identities = 36/150 (24%), Positives = 75/150 (50%), Gaps = 8/150 (5%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARHDIG 151
            + I+ ++G+G FG+V +  + E   L A K++ + ++      I EI++L       I 
Sbjct: 20  VWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI- 78

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               V++   + +   + I+ E   G ++   + +   R      ++ + RQ+LE++ F+
Sbjct: 79  ----VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFL 133

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           H  R+IH DLK  N+L+     +++ D+ V
Sbjct: 134 HSKRIIHRDLKAGNVLMTLEGDIRLADFGV 163

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 71.9 bits (177), Expect = 1e-14
 Identities = 36/154 (23%), Positives = 62/154 (40%), Gaps = 12/154 (7%)

Query: 83  VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY--REAAMIEID 140
                     R+++    G+GTFG V    +      VAIK V    ++  RE   ++I 
Sbjct: 14  ADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE---LQIM 70

Query: 141 VLQRLARHD-IGGTRCVQIRNWFDYRNHIC--IVFEKLGPSLYDFLRKNSYR--SFPIDL 195
               +  H  I   +          R  I   +V E +  +L+   R    R  + P  L
Sbjct: 71  QDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPIL 130

Query: 196 VRELGRQLLESVAFMHE--LRLIHTDLKPENILL 227
           ++    QL+ S+  +H   + + H D+KP N+L+
Sbjct: 131 IKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV 164

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 71.1 bits (175), Expect = 1e-14
 Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 18/152 (11%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-----EIDVLQRLAR 147
            + ++  +GEG +G+V    +   +E VA+KI   ++  R          EI + + L  
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI---VDMKRAVDCPENIKKEICINKML-N 63

Query: 148 H-DIGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           H ++     V+        N   +  E   G  L+D +  +     P    +    QL+ 
Sbjct: 64  HENV-----VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMA 116

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            V ++H + + H D+KPEN+LL   + +K+ D
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISD 148

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 72.0 bits (176), Expect = 1e-14
 Identities = 22/176 (12%), Positives = 54/176 (30%), Gaps = 31/176 (17%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY---------REAAMIEIDVLQ 143
                + +G+      +E  D E  E   + +     +           E   + +    
Sbjct: 74  TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGI 133

Query: 144 RLARHDIGGTRCVQIRNWFDYRNH-----------------ICIVFEKLGPSLYDFL--- 183
           +  +      R +   +                           ++ ++  +L  F    
Sbjct: 134 KNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVL 193

Query: 184 --RKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
               ++++S       +L  Q++  +A +H   L+HT L+P +I+L     V +  
Sbjct: 194 LSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTG 249

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 71.4 bits (175), Expect = 2e-14
 Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 14/151 (9%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMI--EIDVLQRLARH 148
            Y +   +G GTFG+V           VA+KI+  + I        I  EI  L +L RH
Sbjct: 17  HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNL-KLFRH 75

Query: 149 -DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
             I     +++       + I +V E + G  L+D++ KN          R L +Q+L  
Sbjct: 76  PHI-----IKLYQVISTPSDIFMVMEYVSGGELFDYICKN--GRLDEKESRRLFQQILSG 128

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           V + H   ++H DLKPEN+LL +    K+ D
Sbjct: 129 VDYCHRHMVVHRDLKPENVLLDAHMNAKIAD 159

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 70.0 bits (172), Expect = 3e-14
 Identities = 30/153 (19%), Positives = 70/153 (45%), Gaps = 11/153 (7%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLARHD-I 150
              + ++G G +G V +       +++A+K +R+    +E   +  ++D+  R       
Sbjct: 9   LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFT 68

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPI--DLVRELGRQLLESVA 208
                V           + I  E +  SL  F ++   +   I  D++ ++   +++++ 
Sbjct: 69  -----VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE 123

Query: 209 FMH-ELRLIHTDLKPENILLVSAEYVKVPDYKV 240
            +H +L +IH D+KP N+L+ +   VK+ D+ +
Sbjct: 124 HLHSKLSVIHRDVKPSNVLINALGQVKMCDFGI 156

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 70.5 bits (173), Expect = 3e-14
 Identities = 34/172 (19%), Positives = 72/172 (41%), Gaps = 17/172 (9%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHD-I 150
              L +MG GT GQV +    +   ++A+K +R     +  +  ++++DV+ +      I
Sbjct: 27  LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYI 86

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                VQ    F     + I  E +G       ++      P  ++ ++   +++++ ++
Sbjct: 87  -----VQCFGTFITNTDVFIAMELMGTCAEKLKKRMQ-GPIPERILGKMTVAIVKALYYL 140

Query: 211 H-ELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLSMASRVYI 261
             +  +IH D+KP NILL     +K+ D+ +       S +     A     
Sbjct: 141 KEKHGVIHRDVKPSNILLDERGQIKLCDFGI-------SGRLVDDKAKDRSA 185

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 70.4 bits (173), Expect = 3e-14
 Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 18/152 (11%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-----EIDVLQRLAR 147
            + ++  +GEG +G+V    +   +E VA+KI   ++  R          EI + + L  
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKI---VDMKRAVDCPENIKKEICINKML-N 63

Query: 148 H-DIGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           H ++     V+        N   +  E   G  L+D +  +     P    +    QL+ 
Sbjct: 64  HENV-----VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQLMA 116

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            V ++H + + H D+KPEN+LL   + +K+ D
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERDNLKISD 148

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 69.7 bits (171), Expect = 4e-14
 Identities = 38/151 (25%), Positives = 74/151 (49%), Gaps = 8/151 (5%)

Query: 91  TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI 150
              + +L K+GEG++G V +    E  ++VAIK V  +    +  + EI ++Q+     +
Sbjct: 28  EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV-PVESDLQEIIKEISIMQQCDSPHV 86

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                V+    +     + IV E     S+ D +R  + ++   D +  + +  L+ + +
Sbjct: 87  -----VKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEY 140

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           +H +R IH D+K  NILL +  + K+ D+ V
Sbjct: 141 LHFMRKIHRDIKAGNILLNTEGHAKLADFGV 171

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 69.3 bits (170), Expect = 6e-14
 Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 11/151 (7%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDI 150
            +  L K+G+G+FG+V +  DN  +++VAIKI+         E    EI VL +     +
Sbjct: 23  LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV 82

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                 +    +     + I+ E L G S  D L         I  +    R++L+ + +
Sbjct: 83  -----TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATIL---REILKGLDY 134

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           +H  + IH D+K  N+LL     VK+ D+ V
Sbjct: 135 LHSEKKIHRDIKAANVLLSEHGEVKLADFGV 165

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 70.3 bits (172), Expect = 6e-14
 Identities = 50/229 (21%), Positives = 85/229 (37%), Gaps = 29/229 (12%)

Query: 18  PRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPWRPDD 77
           P   P       P +P  K      C +  G         S    G  P  GSP      
Sbjct: 16  PDIDPLEALMTNPVVPESKRFCW-NCGRPVGRSDSETKGASE---GWCPYCGSPYSFLPQ 71

Query: 78  KDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFD-NEKKELVAIKIVRSIN--KYREA 134
                    G+ +  +Y +   +  G  G +    D N     V +K +      + +  
Sbjct: 72  ------LNPGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAM 125

Query: 135 AMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC-----IVFEKL-GPSLYDFLRKNSY 188
           AM E   L  +    I     VQI N+ ++ +        IV E + G SL         
Sbjct: 126 AMAERQFLAEVVHPSI-----VQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKG---- 176

Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           +  P+        ++L +++++H + L++ DLKPENI +++ E +K+ D
Sbjct: 177 QKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENI-MLTEEQLKLID 224

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 67.7 bits (166), Expect = 2e-13
 Identities = 29/173 (16%), Positives = 66/173 (38%), Gaps = 34/173 (19%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           +Y +  ++G+G++G V   ++       A+K+   ++K +                    
Sbjct: 14  QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKV---LSKKKLIRQAGFPRRPPPRGTRPAP 70

Query: 153 TRCVQIRNWFD--YR-------------------------NHICIVFEKL-GPSLYDFLR 184
             C+Q R   +  Y+                         +H+ +VFE +    + +   
Sbjct: 71  GGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT 130

Query: 185 KNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
                    D  R   + L++ + ++H  ++IH D+KP N+L+    ++K+ D
Sbjct: 131 LKP---LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIAD 180

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 68.0 bits (167), Expect = 2e-13
 Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 7/142 (4%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLA 146
           N++  +++ S +GEG +G V         E+VAIK +   +K   A     EI +L+   
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF- 66

Query: 147 RHD-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           +H+ I     +Q  + F+  N + I+ E +   L+  +          D ++    Q L 
Sbjct: 67  KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSD---DHIQYFIYQTLR 123

Query: 206 SVAFMHELRLIHTDLKPENILL 227
           +V  +H   +IH DLKP N+L+
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLI 145

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 67.3 bits (165), Expect = 3e-13
 Identities = 33/154 (21%), Positives = 69/154 (44%), Gaps = 12/154 (7%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLARHD-I 150
            + L ++G G +G V +       +++A+K +RS    +E   +  ++DV+ R +    I
Sbjct: 24  LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYI 83

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK---NSYRSFPIDLVRELGRQLLESV 207
                VQ            I  E +  S   F +          P +++ ++    ++++
Sbjct: 84  -----VQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKAL 138

Query: 208 AFMH-ELRLIHTDLKPENILLVSAEYVKVPDYKV 240
             +   L++IH D+KP NILL  +  +K+ D+ +
Sbjct: 139 NHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGI 172

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 67.2 bits (164), Expect = 4e-13
 Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 11/151 (7%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--EIDVLQRLARHDIG 151
           +  +S++G G  G V +        ++A K++    K      I  E+ VL       I 
Sbjct: 35  FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI- 93

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                     F     I I  E + G SL   L+K      P  ++ ++   +++ + ++
Sbjct: 94  -VGFYGA---FYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYL 147

Query: 211 H-ELRLIHTDLKPENILLVSAEYVKVPDYKV 240
             + +++H D+KP NIL+ S   +K+ D+ V
Sbjct: 148 REKHKIMHRDVKPSNILVNSRGEIKLCDFGV 178

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 67.1 bits (164), Expect = 5e-13
 Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 7/143 (4%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMI--EIDVLQRL 145
           ++   Y I   +G G++G V   +D   ++ VAIK + R      +   I  EI +L RL
Sbjct: 23  HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL 82

Query: 146 ARHD-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
            + D I     + I +     + + IV E     L    +   + +   + ++ +   LL
Sbjct: 83  -KSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLT--EEHIKTILYNLL 139

Query: 205 ESVAFMHELRLIHTDLKPENILL 227
               F+HE  +IH DLKP N LL
Sbjct: 140 LGENFIHESGIIHRDLKPANCLL 162

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 65.8 bits (161), Expect = 8e-13
 Identities = 42/152 (27%), Positives = 77/152 (50%), Gaps = 16/152 (10%)

Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           + L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L +HD
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 71

Query: 150 IGGTRCVQIRN--WFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
                 V+ +   +   R ++ ++ E    G SL D+L+K+  R   I L+ +   Q+ +
Sbjct: 72  ----NIVKYKGVCYSAGRRNLKLIMEYLPYG-SLRDYLQKHKERIDHIKLL-QYTSQICK 125

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            + ++   R IH DL   NIL+ +   VK+ D
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGD 157

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 65.8 bits (161), Expect = 9e-13
 Identities = 29/149 (19%), Positives = 61/149 (40%), Gaps = 18/149 (12%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARHD----- 149
               +G+G FGQ ++    E  E++ +K +   ++  +   + E+ V++ L  H      
Sbjct: 14  HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL-EHPNVLKF 72

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           IG     +          +  + E + G +L   ++      +P        + +   +A
Sbjct: 73  IGV--LYK-------DKRLNFITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMA 122

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPD 237
           ++H + +IH DL   N L+   + V V D
Sbjct: 123 YLHSMNIIHRDLNSHNCLVRENKNVVVAD 151

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 65.9 bits (161), Expect = 1e-12
 Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 22/155 (14%)

Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD 149
           + L ++G+G FG V  C      +   E+VA+K ++ S  ++      EI++L+ L +HD
Sbjct: 44  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHD 102

Query: 150 -----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
                 G   C         R ++ ++ E    G SL D+L+K+  R   I L+ +   Q
Sbjct: 103 NIVKYKG--VCYS-----AGRRNLKLIMEYLPYG-SLRDYLQKHKERIDHIKLL-QYTSQ 153

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           + + + ++   R IH DL   NIL+ +   VK+ D
Sbjct: 154 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 188

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 65.3 bits (160), Expect = 1e-12
 Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 22/162 (13%)

Query: 86  IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--------INKY-REAAM 136
           IG+ +  RY+I+ K+G G    V    D      VAIK +          + ++ RE   
Sbjct: 5   IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHN 64

Query: 137 IEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDL 195
                  +L+  +I     V + +  +  +   +V E + GP+L +++  +      +D 
Sbjct: 65  S-----SQLSHQNI-----VSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH--GPLSVDT 112

Query: 196 VRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
                 Q+L+ +   H++R++H D+KP+NIL+ S + +K+ D
Sbjct: 113 AINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFD 154

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 65.4 bits (160), Expect = 1e-12
 Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 23/156 (14%)

Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARH 148
           + +  +GEG FG+V  C      +   E VA+K ++  S   +      EI++L+ L  H
Sbjct: 24  KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YH 82

Query: 149 D-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGR 201
           +      G   C +     D  N I ++ E    G SL ++L KN  +      + +   
Sbjct: 83  ENIVKYKG--ICTE-----DGGNGIKLIMEFLPSG-SLKEYLPKNKNKINLKQQL-KYAV 133

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           Q+ + + ++   + +H DL   N+L+ S   VK+ D
Sbjct: 134 QICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGD 169

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 65.4 bits (160), Expect = 2e-12
 Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 5/149 (3%)

Query: 81  HYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--E 138
             V     ++ PRY  LS +GEG +G V   +DN  K  VAIK +              E
Sbjct: 16  EMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE 75

Query: 139 IDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE 198
           I +L R    +I G   +      +    + IV + +   LY  L+         D +  
Sbjct: 76  IKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ---HLSNDHICY 132

Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
              Q+L  + ++H   ++H DLKP N+LL
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLL 161

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 65.5 bits (160), Expect = 2e-12
 Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 14/145 (9%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYREAAMI--EIDVLQRL 145
           ++  +Y ++ K+G+G +G V +  D    E+VA+K I  +     +A     EI +L  L
Sbjct: 6   HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTEL 65

Query: 146 ARHD-IGGTRCVQIRNWF--DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
           + H+ I     V + N    D    + +VF+ +   L+  +R N          + +  Q
Sbjct: 66  SGHENI-----VNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEP---VHKQYVVYQ 117

Query: 203 LLESVAFMHELRLIHTDLKPENILL 227
           L++ + ++H   L+H D+KP NILL
Sbjct: 118 LIKVIKYLHSGGLLHRDMKPSNILL 142

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 65.4 bits (160), Expect = 2e-12
 Identities = 39/155 (25%), Positives = 63/155 (40%), Gaps = 25/155 (16%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK------YREAAMIEIDVL 142
           +L  RY  L  +G G  G V    DN+  + VAIK +   +        R     EI ++
Sbjct: 8   DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALR-----EIKII 62

Query: 143 QRLARHD--IG--------GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFP 192
           +RL  HD  +         G++           N + IV E +   L + L +       
Sbjct: 63  RRL-DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLE-- 119

Query: 193 IDLVRELGRQLLESVAFMHELRLIHTDLKPENILL 227
            +  R    QLL  + ++H   ++H DLKP N+ +
Sbjct: 120 -EHARLFMYQLLRGLKYIHSANVLHRDLKPANLFI 153

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 64.7 bits (158), Expect = 3e-12
 Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 16/152 (10%)

Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVRSINKYREAAMI-EIDVLQRLARHD 149
           + +S++G+G FG V  C      +    LVA+K ++     ++     EI +L+ L   D
Sbjct: 26  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSD 84

Query: 150 IGGTRCVQIRN--WFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
                 V+ R   +   R  + +V E    G  L DFL+++  R     L+     Q+ +
Sbjct: 85  ----FIVKYRGVSYGPGRQSLRLVMEYLPSG-CLRDFLQRHRARLDASRLL-LYSSQICK 138

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            + ++   R +H DL   NIL+ S  +VK+ D
Sbjct: 139 GMEYLGSRRCVHRDLAARNILVESEAHVKIAD 170

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 64.2 bits (157), Expect = 4e-12
 Identities = 39/185 (21%), Positives = 70/185 (37%), Gaps = 30/185 (16%)

Query: 63  GAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAI 122
           G +PR        + ++G   F         YR+   +G G  G V E  D  ++ +VA+
Sbjct: 13  GLVPRGSHMDGTAESREG-TQFG-------PYRLRRLVGRGGMGDVYEAEDTVRERIVAL 64

Query: 123 KIVRS--------INKY-REAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFE 173
           K++            +  REA         RL    +     V I ++ +    + +   
Sbjct: 65  KLMSETLSSDPVFRTRMQREA-----RTAGRLQEPHV-----VPIHDFGEIDGQLYVDMR 114

Query: 174 KL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY 232
            + G  L   LR+             + RQ+  ++   H     H D+KPENIL+ + ++
Sbjct: 115 LINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDF 172

Query: 233 VKVPD 237
             + D
Sbjct: 173 AYLVD 177

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 63.9 bits (156), Expect = 4e-12
 Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 26/153 (16%)

Query: 95  RILSKMGEGTFGQVVE-CFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD- 149
            +  ++G G+FG V +  +  +    VA+K++       +  +A   E+ VL++  RH  
Sbjct: 27  TVGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RHVN 81

Query: 150 ----IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
               +G +              + IV +   G SLY  L  +    F +  + ++ RQ  
Sbjct: 82  ILLFMGYST----------APQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTA 130

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
             + ++H   +IH DLK  NI L     VK+ D
Sbjct: 131 RGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGD 163

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 63.8 bits (156), Expect = 4e-12
 Identities = 38/171 (22%), Positives = 64/171 (37%), Gaps = 36/171 (21%)

Query: 86  IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS--------INKY-REAAM 136
              +L+ RY +   +G G   +V    D      VA+K++R+          ++ REA  
Sbjct: 6   TPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREA-- 63

Query: 137 IEIDVLQRLAR---------HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKN 186
                 Q  A          +D G          +       IV E + G +L D +   
Sbjct: 64  ------QNAAALNHPAIVAVYDTGEAETPAGPLPY-------IVMEYVDGVTLRDIVHTE 110

Query: 187 SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
                      E+     +++ F H+  +IH D+KP NI++ +   VKV D
Sbjct: 111 --GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMD 159

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 64.1 bits (156), Expect = 5e-12
 Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 7/113 (6%)

Query: 127 SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRK 185
           S     +A  ++I  +   +  +      V        + ++ I  +     +L D++ +
Sbjct: 100 SSPSPMDAPSVKIRRMDPFSTKNT-----VGQLQPSSPKVYLYIQMQLCRKENLKDWMNR 154

Query: 186 NSYRSFP-IDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
                     +   +  Q+ E+V F+H   L+H DLKP NI     + VKV D
Sbjct: 155 RCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGD 207

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 41.8 bits (98), Expect = 1e-04
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY--REAAMIEIDVLQRL 145
           +  +  MG G FG V E  +       AIK +R  N+   RE  M E+  L +L
Sbjct: 8   FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL 61

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 64.3 bits (157), Expect = 5e-12
 Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 12/162 (7%)

Query: 74  RPDDKDGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
            P  + G Y   + +    +   YR L  +G G +G V    D      VAIK + R   
Sbjct: 4   PPPARSGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ 63

Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
               A  A  E+ +L+ + RH+  IG           D      +V   +G  L   ++ 
Sbjct: 64  SELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH 122

Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL 227
                   D ++ L  Q+L+ + ++H   +IH DLKP N+ +
Sbjct: 123 EKLGE---DRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV 161

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 64.5 bits (157), Expect = 5e-12
 Identities = 35/162 (21%), Positives = 66/162 (40%), Gaps = 13/162 (8%)

Query: 74  RPDDKDGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
           +    +  Y   +G++   +  RY+ L  +G G  G V   +D      VAIK + R   
Sbjct: 41  KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 100

Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
               A  A  E+ +++ +  H   I        +   +    + +V E +  +L   ++ 
Sbjct: 101 NQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM 159

Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL 227
                   + +  L  Q+L  +  +H   +IH DLKP NI++
Sbjct: 160 E----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 197

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 63.1 bits (154), Expect = 7e-12
 Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 14/157 (8%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIV--RSINKYREAAMIEIDVLQRLARHDI 150
            Y +   +G G    V   +   KKE VAIK +         +  + EI  + +    +I
Sbjct: 16  DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI 75

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRE------LGRQL 203
                V     F  ++ + +V + L G S+ D ++    +      V +      + R++
Sbjct: 76  -----VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130

Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           LE + ++H+   IH D+K  NILL     V++ D+ V
Sbjct: 131 LEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGV 167

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 63.5 bits (155), Expect = 7e-12
 Identities = 34/166 (20%), Positives = 58/166 (34%), Gaps = 19/166 (11%)

Query: 78  KDGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREA 134
           K    +  +      +   Y +   +  G++G V    D+E    VAIK V +       
Sbjct: 5   KGEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEG-IPVAIKRVFNTVSDGRT 63

Query: 135 AMI------------EIDVLQRLARHD-IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYD 181
             I            EI +L     H  I G R + +       + + +V E +   L  
Sbjct: 64  VNILSDSFLCKRVLREIRLLNHF-HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQ 122

Query: 182 FLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL 227
            +            ++     +L  +  +HE  ++H DL P NILL
Sbjct: 123 VIHDQR-IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL 167

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 62.7 bits (153), Expect = 1e-11
 Identities = 45/153 (29%), Positives = 67/153 (43%), Gaps = 26/153 (16%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD-----I 150
           +   +G G FG V  C    + + VAIK + S    R+A ++E+  L R+  H       
Sbjct: 12  VEEVVGRGAFGVV--CKAKWRAKDVAIKQIES-ESERKAFIVELRQLSRV-NHPNIVKLY 67

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRK-NSYRSFPIDLVRELGRQLLESVA 208
           G              N +C+V E   G SLY+ L        +          Q  + VA
Sbjct: 68  GACL-----------NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 116

Query: 209 FMHELR---LIHTDLKPENILLVSAEYV-KVPD 237
           ++H ++   LIH DLKP N+LLV+   V K+ D
Sbjct: 117 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICD 149

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 62.7 bits (153), Expect = 1e-11
 Identities = 35/158 (22%), Positives = 63/158 (39%), Gaps = 13/158 (8%)

Query: 78  KDGHYVFAIGENL---TPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSINKYRE 133
           K G Y   + +        Y   + +G G +G V    D    E VAIK + R       
Sbjct: 7   KKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIF 66

Query: 134 A--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYR 189
           A  A  E+ +L+ + +H+  IG        +         +V   +   L   +      
Sbjct: 67  AKRAYRELLLLKHM-QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLK--- 122

Query: 190 SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL 227
            F  + ++ L  Q+L+ + ++H   ++H DLKP N+ +
Sbjct: 123 -FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV 159

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 62.8 bits (153), Expect = 1e-11
 Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 13/162 (8%)

Query: 74  RPDDKDGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIK-IVRSIN 129
           R    +  Y   IG++   +  RY+ L  +G G  G V   +D   +  VAIK + R   
Sbjct: 4   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 63

Query: 130 KYREA--AMIEIDVLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRK 185
               A  A  E+ +++ +  H   IG       +   +    + IV E +  +L   ++ 
Sbjct: 64  NQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM 122

Query: 186 NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL 227
                     +  L  Q+L  +  +H   +IH DLKP NI++
Sbjct: 123 ELDHER----MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 160

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 62.9 bits (153), Expect = 2e-11
 Identities = 31/150 (20%), Positives = 62/150 (41%), Gaps = 20/150 (13%)

Query: 93  RYRILS-KMGEGTFGQV--VECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD 149
            +     K+G GT+G V   +  D +  +  A+K +        +A  EI +L+ L +H 
Sbjct: 21  LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-ISMSACREIALLREL-KHP 78

Query: 150 -IGGTRCVQIRNWFDYRNHICI--VFE-------KLGPSLYDFLRKNSYRSFPIDLVREL 199
            +     + ++  F       +  +F+        +                P  +V+ L
Sbjct: 79  NV-----ISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSL 133

Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVS 229
             Q+L+ + ++H   ++H DLKP NIL++ 
Sbjct: 134 LYQILDGIHYLHANWVLHRDLKPANILVMG 163

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 62.0 bits (151), Expect = 2e-11
 Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 25/156 (16%)

Query: 95  RILSKMGEGTFGQVVEC----FDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARH 148
           + +  +GEG FG+V        ++   E+VA+K +++    ++R     EID+L+ L  H
Sbjct: 34  KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-YH 92

Query: 149 D-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGR 201
           +      G   C            + +V E   LG SL D+L ++S       L+    +
Sbjct: 93  EHIIKYKG--CCED-----AGAASLQLVMEYVPLG-SLRDYLPRHSIG--LAQLL-LFAQ 141

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           Q+ E +A++H    IH DL   N+LL +   VK+ D
Sbjct: 142 QICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGD 177

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 61.9 bits (151), Expect = 2e-11
 Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 12/142 (8%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHDIGGTRCV 156
           GEG+F  VV   +       AIKI+    I K  +      E DV+ RL  H       V
Sbjct: 39  GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPF----FV 93

Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
           ++   F     +           L  ++RK    SF     R    +++ ++ ++H   +
Sbjct: 94  KLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGKGI 151

Query: 216 IHTDLKPENILLVSAEYVKVPD 237
           IH DLKPENILL    ++++ D
Sbjct: 152 IHRDLKPENILLNEDMHIQITD 173

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 61.6 bits (150), Expect = 3e-11
 Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 24/154 (15%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD--- 149
           I  K+G G+FG V     +     VA+KI+   +   +     + E+ +++RL RH    
Sbjct: 41  IKEKIGAGSFGTVHRAEWHGSD--VAVKILMEQDFHAERVNEFLREVAIMKRL-RHPNIV 97

Query: 150 --IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYR-SFPIDLVRELGRQLLE 205
             +G     Q         ++ IV E L   SLY  L K+  R          +   + +
Sbjct: 98  LFMGA--VTQ-------PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAK 148

Query: 206 SVAFMHELR--LIHTDLKPENILLVSAEYVKVPD 237
            + ++H     ++H +LK  N+L+     VKV D
Sbjct: 149 GMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCD 182

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 61.9 bits (151), Expect = 3e-11
 Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 12/150 (8%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHD 149
           +  +  +G G+FG+V+     E     A+KI+    + K ++    + E  +LQ +    
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFP 101

Query: 150 IGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                 V++   F   +++ +V E   G  ++  LR+     F     R    Q++ +  
Sbjct: 102 F----LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFE 155

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++H L LI+ DLKPEN+L+    Y++V D+
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDF 185

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 61.3 bits (149), Expect = 3e-11
 Identities = 29/188 (15%), Positives = 51/188 (27%), Gaps = 30/188 (15%)

Query: 66  PRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIV 125
             + +PP       G  +         RYR+L   G     Q  +  D      VA+  V
Sbjct: 11  RESSAPPDDVQLVPGARI------ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFV 64

Query: 126 RSINK---------YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL- 175
                                      RL+R  I      ++ +    R    +V E + 
Sbjct: 65  DPQGVLPDDVLQETLSRT--------LRLSR--IDKPGVARVLDVVHTRAGGLVVAEWIR 114

Query: 176 GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV 235
           G SL +          P+  +R   + L  +    H   +  +   P  + +     V +
Sbjct: 115 GGSLQEVADT---SPSPVGAIR-AMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVL 170

Query: 236 PDYKVPSP 243
                   
Sbjct: 171 AYPATMPD 178

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 61.2 bits (149), Expect = 3e-11
 Identities = 34/161 (21%), Positives = 56/161 (34%), Gaps = 29/161 (18%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI--------EIDVLQRLAR 147
              ++G+G FG V +    + K +VAIK +   +   E  MI        E+ ++  L  
Sbjct: 23  YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-N 81

Query: 148 HD-----IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGR 201
           H       G              N   +V E +    LY  L   +       +   L  
Sbjct: 82  HPNIVKLYGLMH-----------NPPRMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLML 129

Query: 202 QLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKV 240
            +   + +M      ++H DL+  NI L S +       KV
Sbjct: 130 DIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKV 170

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 61.8 bits (150), Expect = 3e-11
 Identities = 25/153 (16%), Positives = 57/153 (37%), Gaps = 11/153 (7%)

Query: 94  YRILSKMGEG--TFGQVVECFDNEKKELVAIKIV---RSINKYREAAMIEIDVLQRLARH 148
           Y +L+ +G+G      V         E V ++ +      N+       E+ V +     
Sbjct: 27  YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHP 86

Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           +I     V  R  F   N + +V   +   S  D +  +         +  + + +L+++
Sbjct: 87  NI-----VPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKAL 141

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
            ++H +  +H  +K  +IL+     V +   + 
Sbjct: 142 DYIHHMGYVHRSVKASHILISVDGKVYLSGLRS 174

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 61.6 bits (150), Expect = 4e-11
 Identities = 41/145 (28%), Positives = 75/145 (51%), Gaps = 10/145 (6%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++  K+G G FG+V     N+  + VA+K ++  +   EA + E +V++ L +HD    +
Sbjct: 191 KLEKKLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEAFLAEANVMKTL-QHD----K 244

Query: 155 CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            V++      +  I I+ E    G SL DFL+ +     P+  + +   Q+ E +AF+ +
Sbjct: 245 LVKLHAVV-TKEPIYIITEFMAKG-SLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 302

Query: 213 LRLIHTDLKPENILLVSAEYVKVPD 237
              IH DL+  NIL+ ++   K+ D
Sbjct: 303 RNYIHRDLRAANILVSASLVCKIAD 327

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 61.2 bits (149), Expect = 4e-11
 Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 19/149 (12%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--------YREAAMIEID 140
            +  RY+ LS +G G +G V   FD +    VA+K +    +        YR     E+ 
Sbjct: 26  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELR 80

Query: 141 VLQRLARHD--IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRE 198
           +L+ + +H+  IG           +  N + +V   +G  L + ++         D V+ 
Sbjct: 81  LLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQF 136

Query: 199 LGRQLLESVAFMHELRLIHTDLKPENILL 227
           L  Q+L  + ++H   +IH DLKP N+ +
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAV 165

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 60.4 bits (147), Expect = 7e-11
 Identities = 32/152 (21%), Positives = 66/152 (43%), Gaps = 26/152 (17%)

Query: 96  ILSKMGEGTFGQVVE-CFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD-- 149
           I   +G+G FGQV    +  E    VAI+++          +A   E+   ++  RH+  
Sbjct: 37  IGELIGKGRFGQVYHGRWHGE----VAIRLIDIERDNEDQLKAFKREVMAYRQT-RHENV 91

Query: 150 ---IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
              +G   C+          H+ I+     G +LY  +R        ++  R++ +++++
Sbjct: 92  VLFMGA--CMS-------PPHLAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVK 141

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            + ++H   ++H DLK +N+       V + D
Sbjct: 142 GMGYLHAKGILHKDLKSKNV-FYDNGKVVITD 172

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 21/155 (13%), Positives = 53/155 (34%), Gaps = 25/155 (16%)

Query: 96  ILSKMGEGTFGQVVE--CFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD- 149
            L+K+ E   G++ +     N+    + +K+++  +   +       E   L+    H  
Sbjct: 14  FLTKLNENHSGELWKGRWQGND----IVVKVLKVRDWSTRKSRDFNEECPRLRIF-SHPN 68

Query: 150 ----IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
               +G   C           H  ++   +   SLY+ L + +          +    + 
Sbjct: 69  VLPVLGA--CQS-----PPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMA 121

Query: 205 ESVAFMHELR--LIHTDLKPENILLVSAEYVKVPD 237
             +AF+H L   +    L   ++++      ++  
Sbjct: 122 RGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISM 156

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 59.8 bits (145), Expect = 2e-10
 Identities = 32/150 (21%), Positives = 65/150 (43%), Gaps = 10/150 (6%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARHD 149
           +R    +G+G FG+V  C      ++ A K +        K    A+ E  +L+++    
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           +     V +   ++ ++ +C+V   + G  L   +       FP         ++   + 
Sbjct: 246 V-----VSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLE 300

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            +H  R+++ DLKPENILL    ++++ D 
Sbjct: 301 DLHRERIVYRDLKPENILLDDHGHIRISDL 330

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 59.8 bits (145), Expect = 2e-10
 Identities = 32/150 (21%), Positives = 64/150 (42%), Gaps = 18/150 (12%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
            +  K+G G +G+V E    +    VA+K ++      E  + E  V++ + +H      
Sbjct: 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQL 281

Query: 150 IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           +G   C +            I+ E    G +L D+LR+ + +     ++  +  Q+  ++
Sbjct: 282 LG--VCTR-------EPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAM 331

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            ++ +   IH +L   N L+     VKV D
Sbjct: 332 EYLEKKNFIHRNLAARNCLVGENHLVKVAD 361

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 59.7 bits (144), Expect = 2e-10
 Identities = 33/150 (22%), Positives = 66/150 (44%), Gaps = 11/150 (7%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARHD 149
           +  L  +G+G+FG+V+        EL A+KI++      +   E  M+E  VL    +  
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 402

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                  Q+ + F   + +  V E + G  L   +++     F          ++   + 
Sbjct: 403 F----LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLF 456

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           F+    +I+ DLK +N++L S  ++K+ D+
Sbjct: 457 FLQSKGIIYRDLKLDNVMLDSEGHIKIADF 486

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 58.8 bits (143), Expect = 2e-10
 Identities = 35/160 (21%), Positives = 61/160 (38%), Gaps = 29/160 (18%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMI-----EIDVLQRLARHD 149
            +   +G G FG+V   F    +  VA+K  R       +  I     E  +   L +H 
Sbjct: 10  TLEEIIGIGGFGKVYRAFWIGDE--VAVKAARHDPDEDISQTIENVRQEAKLFAML-KHP 66

Query: 150 -----IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQL 203
                 G   C++         ++C+V E   G  L   L     +  P D++     Q+
Sbjct: 67  NIIALRGV--CLK-------EPNLCLVMEFARGGPLNRVLSG---KRIPPDILVNWAVQI 114

Query: 204 LESVAFMHE---LRLIHTDLKPENILLVSAEYVKVPDYKV 240
              + ++H+   + +IH DLK  NIL++          K+
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKI 154

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 59.1 bits (143), Expect = 3e-10
 Identities = 32/152 (21%), Positives = 64/152 (42%), Gaps = 15/152 (9%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SI--NKYREAAMIEIDVLQRLARHDI 150
            +   +G G FG+V  C   +  ++ A+K +    I   +    A+ E  +L       +
Sbjct: 192 SVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL-----V 246

Query: 151 GGTRC---VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
               C   V +   F   + +  + + + G  L+  L ++    F    +R    +++  
Sbjct: 247 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILG 304

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +  MH   +++ DLKP NILL    +V++ D 
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDL 336

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 58.4 bits (140), Expect = 4e-10
 Identities = 44/193 (22%), Positives = 64/193 (33%), Gaps = 52/193 (26%)

Query: 91  TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---------SINKYREAAMIEIDV 141
           T + +   K+GEG FG+V +         VAIKI+          S  K  E  + EI +
Sbjct: 19  TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIII 76

Query: 142 LQRLARHDIG------------GTRCVQ-------IRNWFDYRN---------------- 166
            + L+                    CVQ       ++ W  Y +                
Sbjct: 77  SKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQ 136

Query: 167 -HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPEN 224
             I + FE  G  L     K S     +   + +  QL  S+A     LR  H DL   N
Sbjct: 137 LFIVLEFEFGGIDLEQMRTKLS----SLATAKSILHQLTASLAVAEASLRFEHRDLHWGN 192

Query: 225 ILLVSAEYVKVPD 237
           +LL      K+  
Sbjct: 193 VLLKKTSLKKLHY 205

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 57.5 bits (140), Expect = 7e-10
 Identities = 35/157 (22%), Positives = 73/157 (46%), Gaps = 17/157 (10%)

Query: 92  PRYRI-----LSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVL 142
           P+Y +     L  +G G+FG+V            A+K+++   + + ++      E  +L
Sbjct: 1   PKYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLML 60

Query: 143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGR 201
             +  H       +++   F     I ++ + + G  L+  LRK   + FP  + +    
Sbjct: 61  SIV-THPF----IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK--SQRFPNPVAKFYAA 113

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++  ++ ++H   +I+ DLKPENILL    ++K+ D+
Sbjct: 114 EVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDF 150

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 57.3 bits (139), Expect = 7e-10
 Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 18/150 (12%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
            +  K+G G +G+V E    +    VA+K ++      E  + E  V++ + +H      
Sbjct: 16  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQL 74

Query: 150 IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           +G   C +            I+ E    G +L D+LR+ + +     ++  +  Q+  ++
Sbjct: 75  LG--VCTR-------EPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAM 124

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            ++ +   IH DL   N L+     VKV D
Sbjct: 125 EYLEKKNFIHRDLAARNCLVGENHLVKVAD 154

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 57.3 bits (139), Expect = 7e-10
 Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 25/157 (15%)

Query: 95  RILSKMGEGTFGQVVE---CFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLAR 147
           R+L K+G+G+FG V        + K   VA+K ++    S  +  +  + E++ +  L  
Sbjct: 21  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-D 79

Query: 148 HDIGGTRCVQIRNWFDY----RNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGR 201
           H       +++     Y       + +V E   LG SL D LRK+        L      
Sbjct: 80  HR----NLIRL-----YGVVLTPPMKMVTELAPLG-SLLDRLRKHQGHFLLGTLS-RYAV 128

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           Q+ E + ++   R IH DL   N+LL + + VK+ D+
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF 165

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 22/149 (14%)

Query: 99  KMGEGTFGQVVE-CFDNEKKEL-VAIKIVR--SINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++G G FG V +  +   KK++ VAIK+++  +     E  M E  ++ +L  +      
Sbjct: 17  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-DNP----Y 71

Query: 155 CVQIRNWFDY----RNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
            V++             + +V E    G  L+ FL          ++  EL  Q+   + 
Sbjct: 72  IVRL-----IGVCQAEALMLVMEMAGGG-PLHKFLVGKREEIPVSNVA-ELLHQVSMGMK 124

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPD 237
           ++ E   +H DL   N+LLV+  Y K+ D
Sbjct: 125 YLEEKNFVHRDLAARNVLLVNRHYAKISD 153

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 56.7 bits (137), Expect = 1e-09
 Identities = 36/179 (20%), Positives = 67/179 (37%), Gaps = 27/179 (15%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD-----I 150
           +   +G+G FG+V       + E VA+KI  S  +       EI     L RH+     I
Sbjct: 46  LQESIGKGRFGEV--WRGKWRGEEVAVKIFSSREERSWFREAEIYQTVML-RHENILGFI 102

Query: 151 GGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                            + +V +  + G SL+D+L + +     ++ + +L       +A
Sbjct: 103 AADNKDN-----GTWTQLWLVSDYHEHG-SLFDYLNRYT---VTVEGMIKLALSTASGLA 153

Query: 209 FMHELRL--------IHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLSMASRV 259
            +H   +         H DLK +NIL+       + D  +     + +    ++   RV
Sbjct: 154 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 212

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 57.1 bits (138), Expect = 1e-09
 Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 11/148 (7%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHDIG 151
           IL  +G G FG+V         ++ A+KI+    + K  E A    E DVL       I 
Sbjct: 78  ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWI- 136

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                 +   F   N++ +V +   G  L   L K   R  P ++ R    +++ ++  +
Sbjct: 137 ----TTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEEMARFYLAEMVIAIDSV 191

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H+L  +H D+KP+NIL+    ++++ D+
Sbjct: 192 HQLHYVHRDIKPDNILMDMNGHIRLADF 219

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 56.2 bits (136), Expect = 1e-09
 Identities = 32/157 (20%), Positives = 60/157 (38%), Gaps = 27/157 (17%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD-----I 150
           +L  +G+G +G+V     + + E VA+KI  S ++       E+     L RH+     I
Sbjct: 12  LLECVGKGRYGEVWRG--SWQGENVAVKIFSSRDEKSWFRETELYNTVML-RHENILGFI 68

Query: 151 GGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                 +          + ++    ++G SLYD+L+  +           +   +   +A
Sbjct: 69  ASDMTSR-----HSSTQLWLITHYHEMG-SLYDYLQLTT---LDTVSCLRIVLSIASGLA 119

Query: 209 FMHELRL--------IHTDLKPENILLVSAEYVKVPD 237
            +H             H DLK +NIL+       + D
Sbjct: 120 HLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIAD 156

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 56.5 bits (137), Expect = 1e-09
 Identities = 33/157 (21%), Positives = 73/157 (46%), Gaps = 26/157 (16%)

Query: 95  RILSKMGEGTFGQVVECF---DNEKKEL-VAIKIVR--SINKYREAAMIEIDVLQRLARH 148
           + +  +G G FG V +     + EK ++ VAIK +R  +  K  +  + E  V+  +  +
Sbjct: 18  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DN 76

Query: 149 D-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGR 201
                 +G   C+         + + ++ +    G  L D++R++        L+     
Sbjct: 77  PHVCRLLG--ICLT--------STVQLITQLMPFG-CLLDYVREHKDNIGSQYLL-NWCV 124

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           Q+ + + ++ + RL+H DL   N+L+ + ++VK+ D+
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 161

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 56.6 bits (137), Expect = 2e-09
 Identities = 31/148 (20%), Positives = 69/148 (46%), Gaps = 13/148 (8%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHDIG 151
           ++  +G G FG+V        +++ A+K++    + K  ++A    E D++       + 
Sbjct: 73  VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV- 131

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               VQ+   F    ++ +V E + G  L + +        P    R    +++ ++  +
Sbjct: 132 ----VQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAI 184

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H +  IH D+KP+N+LL  + ++K+ D+
Sbjct: 185 HSMGFIHRDVKPDNMLLDKSGHLKLADF 212

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 33/150 (22%), Positives = 72/150 (48%), Gaps = 11/150 (7%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHD 149
           + +L  +G G++ +V+     +   + A+K+V+   +N   +      E  V ++ + H 
Sbjct: 11  FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                 V + + F   + +  V E + G  L   +++   R  P +  R    ++  ++ 
Sbjct: 71  F----LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALN 124

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++HE  +I+ DLK +N+LL S  ++K+ DY
Sbjct: 125 YLHERGIIYRDLKLDNVLLDSEGHIKLTDY 154

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 56.2 bits (136), Expect = 2e-09
 Identities = 32/150 (21%), Positives = 72/150 (48%), Gaps = 11/150 (7%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHD 149
           + +L  +G G++ +V+     +   + A+++V+   +N   +      E  V ++ + H 
Sbjct: 54  FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                 V + + F   + +  V E + G  L   +++   R  P +  R    ++  ++ 
Sbjct: 114 F----LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALN 167

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++HE  +I+ DLK +N+LL S  ++K+ DY
Sbjct: 168 YLHERGIIYRDLKLDNVLLDSEGHIKLTDY 197

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 55.7 bits (135), Expect = 3e-09
 Identities = 32/150 (21%), Positives = 64/150 (42%), Gaps = 11/150 (7%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHD 149
           +  L  +G+G+FG+V+        EL A+KI++   + +  +    M+E  VL    +  
Sbjct: 22  FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 81

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                  Q+ + F   + +  V E + G  L           F          ++   + 
Sbjct: 82  F----LTQLHSCFQTMDRLYFVMEYVNGGDL--MYHIQQVGRFKEPHAVFYAAEIAIGLF 135

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           F+    +I+ DLK +N++L S  ++K+ D+
Sbjct: 136 FLQSKGIIYRDLKLDNVMLDSEGHIKIADF 165

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 55.3 bits (134), Expect = 3e-09
 Identities = 41/149 (27%), Positives = 77/149 (51%), Gaps = 18/149 (12%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L +H     R
Sbjct: 16  KLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQL-QHQ----R 69

Query: 155 CVQIRNWFDY----RNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
            V++     Y    +  I I+ E  + G SL DFL+  S     I+ + ++  Q+ E +A
Sbjct: 70  LVRL-----YAVVTQEPIYIITEYMENG-SLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPD 237
           F+ E   IH DL+  NIL+      K+ D
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSCKIAD 152

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 55.9 bits (135), Expect = 4e-09
 Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 16/148 (10%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    +
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 240

Query: 155 CVQIRNWFDY----RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
            VQ+     Y       I IV E +   SL DFL+  + +   +  + ++  Q+   +A+
Sbjct: 241 LVQL-----YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 295

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPD 237
           +  +  +H DL+  NIL+      KV D
Sbjct: 296 VERMNYVHRDLRAANILVGENLVCKVAD 323

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 55.7 bits (135), Expect = 4e-09
 Identities = 41/184 (22%), Positives = 66/184 (35%), Gaps = 27/184 (14%)

Query: 63  GAIPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAI 122
               ++G    R   KD   +    E+L     +  ++G G FG+V          LVA+
Sbjct: 91  PLTKKSGVVLHRAVPKDKWVLNH--EDLV----LGEQIGRGNFGEVFSGRLRADNTLVAV 144

Query: 123 KIVR--SINKYREAAMIEIDVLQRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE-- 173
           K  R       +   + E  +L++   H      IG   C Q       +  I IV E  
Sbjct: 145 KSCRETLPPDLKAKFLQEARILKQY-SHPNIVRLIG--VCTQ-------KQPIYIVMELV 194

Query: 174 KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV 233
           + G     FLR    R     L+ ++       + ++     IH DL   N L+     +
Sbjct: 195 QGG-DFLTFLRTEGARLRVKTLL-QMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVL 252

Query: 234 KVPD 237
           K+ D
Sbjct: 253 KISD 256

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 55.8 bits (135), Expect = 4e-09
 Identities = 37/150 (24%), Positives = 66/150 (44%), Gaps = 20/150 (13%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
           ++L  +G+G FG V+       K  VA+K +++ +   +A + E  V+ +L RH      
Sbjct: 196 KLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKN-DATAQAFLAEASVMTQL-RHSNLVQL 251

Query: 150 IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           +G    V+       +  + IV E    G SL D+LR         D + +    + E++
Sbjct: 252 LG--VIVE------EKGGLYIVTEYMAKG-SLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 302

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            ++     +H DL   N+L+      KV D
Sbjct: 303 EYLEGNNFVHRDLAARNVLVSEDNVAKVSD 332

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 55.5 bits (134), Expect = 4e-09
 Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 11/148 (7%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHDIG 151
           IL  +G G F +V      +  ++ A+KI+    + K  E +    E DVL    R  I 
Sbjct: 65  ILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWI- 123

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
                Q+   F   N++ +V E   G  L   L K   R  P ++ R    +++ ++  +
Sbjct: 124 ----TQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGER-IPAEMARFYLAEIVMAIDSV 178

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H L  +H D+KP+NILL    ++++ D+
Sbjct: 179 HRLGYVHRDIKPDNILLDRCGHIRLADF 206

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 54.9 bits (133), Expect = 4e-09
 Identities = 37/154 (24%), Positives = 64/154 (41%), Gaps = 23/154 (14%)

Query: 95  RILSKMGEGTFGQVVE---CFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHD 149
            +   +GEG FG+V E        +K  VA+K  +       +E  M E  +++ L  H 
Sbjct: 15  VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL-DHP 73

Query: 150 IGGTRCVQIRNWFDY----RNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQL 203
                 V++               I+ E    G  L  +L +N      + LV     Q+
Sbjct: 74  ----HIVKL-----IGIIEEEPTWIIMELYPYG-ELGHYLERNKNSLKVLTLV-LYSLQI 122

Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            +++A++  +  +H D+   NIL+ S E VK+ D
Sbjct: 123 CKAMAYLESINCVHRDIAVRNILVASPECVKLGD 156

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 54.9 bits (133), Expect = 4e-09
 Identities = 40/150 (26%), Positives = 66/150 (44%), Gaps = 20/150 (13%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
             + ++G G FG V   +   K + VAIK +R      E  + E +V+ +L  H      
Sbjct: 11  TFVQEIGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDFIEEAEVMMKL-SHPKLVQL 68

Query: 150 IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
            G   C++       +  IC+V E  + G  L D+LR          L+  +   + E +
Sbjct: 69  YG--VCLE-------QAPICLVTEFMEHG-CLSDYLRTQRGLFAAETLL-GMCLDVCEGM 117

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           A++ E  +IH DL   N L+   + +KV D
Sbjct: 118 AYLEEACVIHRDLAARNCLVGENQVIKVSD 147

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 54.5 bits (132), Expect = 6e-09
 Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 23/154 (14%)

Query: 95  RILSKMGEGTFGQVVE---CFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHD 149
            +   +GEG FG V +            VAIK  +  + +  RE  + E   +++   H 
Sbjct: 18  ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHP 76

Query: 150 IGGTRCVQIRNWFDY----RNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQL 203
                 V++           N + I+ E   LG  L  FL+   Y      L+     QL
Sbjct: 77  ----HIVKL-----IGVITENPVWIIMELCTLG-ELRSFLQVRKYSLDLASLI-LYAYQL 125

Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
             ++A++   R +H D+   N+L+ S + VK+ D
Sbjct: 126 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGD 159

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 55.2 bits (133), Expect = 6e-09
 Identities = 35/153 (22%), Positives = 62/153 (40%), Gaps = 16/153 (10%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARHDI 150
                +G G FG+V  C      +L A K +        K  + AM+E  +L ++    I
Sbjct: 188 LDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFI 247

Query: 151 GGTRCVQIRNWFDYRNHICIVFE-----KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
                V +   F+ +  +C+V        +   +Y+    N    F          Q++ 
Sbjct: 248 -----VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN--PGFQEPRAIFYTAQIVS 300

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            +  +H+  +I+ DLKPEN+LL     V++ D 
Sbjct: 301 GLEHLHQRNIIYRDLKPENVLLDDDGNVRISDL 333

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 54.9 bits (133), Expect = 6e-09
 Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 11/150 (7%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHD 149
           +  +  +G+G+FG+V+     E  +L A+K+++   I +  +    M E  +L     H 
Sbjct: 25  FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP 84

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                  Q+   F   + +  V E + G  L         R F     R    +++ ++ 
Sbjct: 85  F----LTQLFCCFQTPDRLFFVMEFVNGGDL--MFHIQKSRRFDEARARFYAAEIISALM 138

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           F+H+  +I+ DLK +N+LL    + K+ D+
Sbjct: 139 FLHDKGIIYRDLKLDNVLLDHEGHCKLADF 168

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 55.0 bits (132), Expect = 7e-09
 Identities = 47/239 (19%), Positives = 82/239 (34%), Gaps = 29/239 (12%)

Query: 10  PHKNMDKRPRKRPRLTWDVPPPLPPPKVLPA-LYCVQEFGNGGMPNYACSSMFYGAIPRT 68
                       P     +  P      L +  Y  +              M        
Sbjct: 259 ASNASGAAAPTLPAHPSTLTHPQRRIDTLNSDGYTPEPARITSPDKPRPMPMDTSVFESP 318

Query: 69  GSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVE-CFDNEKKEL-VAIKIVR 126
            S P    DK    +F   +NL        ++G G FG V +  +   KK++ VAIK+++
Sbjct: 319 FSDPEELKDKK---LFLKRDNLL---IADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLK 372

Query: 127 --SINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY----RNHICIVFE--KLGPS 178
             +     E  M E  ++ +L  +       V++             + +V E    G  
Sbjct: 373 QGTEKADTEEMMREAQIMHQL-DNP----YIVRL-----IGVCQAEALMLVMEMAGGG-P 421

Query: 179 LYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           L+ FL          ++  EL  Q+   + ++ E   +H +L   N+LLV+  Y K+ D
Sbjct: 422 LHKFLVGKREEIPVSNVA-ELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISD 479

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 54.8 bits (132), Expect = 7e-09
 Identities = 43/240 (17%), Positives = 75/240 (31%), Gaps = 27/240 (11%)

Query: 14  MDKRPRKRPRLTWDVPPPLPPPKVLPALYCVQEFGNGGMPNYACSSMFYGAIPRTGSPPW 73
           M        R    V   +  P+  P L  +          Y  +           +   
Sbjct: 7   MGHHHHHHGRRRASVAAGILVPRGSPGLDGICSIEELSTSLYKKAGSENLYFQGANTVHI 66

Query: 74  RPDDKDGHYVFAIGENLTPRYR----ILSKMGEGTFGQVVECF---DNEKKELVAIKIVR 126
                +   V A+   +             +G G FG V       ++ KK   A+K + 
Sbjct: 67  DLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN 126

Query: 127 SINKYREAA--MIEIDVLQRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGP 177
            I    E +  + E  +++    H      +G                  +V    K G 
Sbjct: 127 RITDIGEVSQFLTEGIIMKDF-SHPNVLSLLG---IC-----LRSEGSPLVVLPYMKHG- 176

Query: 178 SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            L +F+R  ++     DL+   G Q+ + + F+   + +H DL   N +L     VKV D
Sbjct: 177 DLRNFIRNETHNPTVKDLIG-FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVAD 235

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 54.6 bits (132), Expect = 7e-09
 Identities = 37/143 (25%), Positives = 73/143 (51%), Gaps = 11/143 (7%)

Query: 101 GEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHDIGGTRCV 156
           G+G+FG+V+      ++   A+K+++  +I K +E    M E +VL +  +H       V
Sbjct: 47  GKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPF----LV 102

Query: 157 QIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRL 215
            +   F   + +  V + + G  L+  L++   R F     R    ++  ++ ++H L +
Sbjct: 103 GLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNI 160

Query: 216 IHTDLKPENILLVSAEYVKVPDY 238
           ++ DLKPENILL S  ++ + D+
Sbjct: 161 VYRDLKPENILLDSQGHIVLTDF 183

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 54.6 bits (132), Expect = 7e-09
 Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 14/150 (9%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHD- 149
            IL  +G+G+FG+V     N+ K++ A+K +      +  E      E+ ++Q L  H  
Sbjct: 18  EILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-EHPF 76

Query: 150 IGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           +     V +   F     + +V +  LG  L   L++N    F  + V+    +L+ ++ 
Sbjct: 77  L-----VNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALD 129

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++   R+IH D+KP+NILL    +V + D+
Sbjct: 130 YLQNQRIIHRDMKPDNILLDEHGHVHITDF 159

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 54.9 bits (132), Expect = 8e-09
 Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 16/148 (10%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTR 154
           R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L RH+    +
Sbjct: 270 RLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKL-RHE----K 323

Query: 155 CVQIRNWFDY----RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
            VQ+     Y       I IV E +   SL DFL+  + +   +  + ++  Q+   +A+
Sbjct: 324 LVQL-----YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 378

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPD 237
           +  +  +H DL+  NIL+      KV D
Sbjct: 379 VERMNYVHRDLRAANILVGENLVCKVAD 406

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 53.7 bits (130), Expect = 9e-09
 Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 20/150 (13%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
            +L ++G G FG V       + + VA+K+++  +   +    E   + +L  H      
Sbjct: 11  TLLKELGSGQFGVVKLGKWKGQYD-VAVKMIKEGSMSEDEFFQEAQTMMKL-SHPKLVKF 68

Query: 150 IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
            G   C +          I IV E    G  L ++LR +     P  L+ E+   + E +
Sbjct: 69  YG--VCSK-------EYPIYIVTEYISNG-CLLNYLRSHGKGLEPSQLL-EMCYDVCEGM 117

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           AF+   + IH DL   N L+     VKV D
Sbjct: 118 AFLESHQFIHRDLAARNCLVDRDLCVKVSD 147

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 54.1 bits (131), Expect = 9e-09
 Identities = 31/150 (20%), Positives = 64/150 (42%), Gaps = 11/150 (7%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHD 149
           + +   +G+G+FG+V      +  +  AIK ++   +    +    M+E  VL     H 
Sbjct: 19  FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                   +   F  + ++  V E L G  L   ++      F +        +++  + 
Sbjct: 79  F----LTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQ 132

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           F+H   +++ DLK +NILL    ++K+ D+
Sbjct: 133 FLHSKGIVYRDLKLDNILLDKDGHIKIADF 162

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 54.0 bits (130), Expect = 1e-08
 Identities = 30/158 (18%), Positives = 62/158 (39%), Gaps = 29/158 (18%)

Query: 96  ILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
           ++ ++G+G +G+V    +  EK   VA+K+  +  +       EI     + RH+     
Sbjct: 41  MVKQIGKGRYGEVWMGKWRGEK---VAVKVFFTTEEASWFRETEIYQTVLM-RHENILGF 96

Query: 150 IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           I     ++          + ++ +  + G SLYD+L+  +        + +L    +  +
Sbjct: 97  IAA--DIKGTG---SWTQLYLITDYHENG-SLYDYLKSTT---LDAKSMLKLAYSSVSGL 147

Query: 208 AFMHELRL--------IHTDLKPENILLVSAEYVKVPD 237
             +H             H DLK +NIL+       + D
Sbjct: 148 CHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIAD 185

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 53.9 bits (130), Expect = 1e-08
 Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 26/157 (16%)

Query: 95  RILSKMGEGTFGQVVECF---DNEKKEL-VAIKIVR--SINKYREAAMIEIDVLQRLARH 148
           R L  +G G FG V +     + E  ++ V IK++   S  +  +A    +  +  L  H
Sbjct: 16  RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL-DH 74

Query: 149 D-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGR 201
                 +G   C          + + +V +   LG SL D +R++     P  L+   G 
Sbjct: 75  AHIVRLLG--LCPG--------SSLQLVTQYLPLG-SLLDHVRQHRGALGPQLLL-NWGV 122

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           Q+ + + ++ E  ++H +L   N+LL S   V+V D+
Sbjct: 123 QIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADF 159

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 18/153 (11%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHD 149
           +  L  +G+GTFG+V+   +       A+KI+R   I    E A  + E  VLQ      
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN----- 61

Query: 150 IGGTRC---VQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
              TR      ++  F   + +C V E   G  L+  L +   R F  +  R  G +++ 
Sbjct: 62  ---TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVS 116

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++ ++H   +++ D+K EN++L    ++K+ D+
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDF 149

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 53.0 bits (128), Expect = 2e-08
 Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 27/161 (16%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVE-CFDNEKKEL-VAIKIVR---SINKYREAAMIEIDVL 142
           + LT   + L   G G FG V +  +  +K    VA+KI++   +    ++  + E +V+
Sbjct: 16  KLLTLEDKEL---GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 72

Query: 143 QRLARHDIGGTRCVQIRNWFDY----RNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLV 196
           Q+L  +       V++               +V E  +LG  L  +L++N  R      +
Sbjct: 73  QQL-DNP----YIVRM-----IGICEAESWMLVMEMAELG-PLNKYLQQN--RHVKDKNI 119

Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            EL  Q+   + ++ E   +H DL   N+LLV+  Y K+ D
Sbjct: 120 IELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISD 160

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 53.4 bits (129), Expect = 2e-08
 Identities = 37/174 (21%), Positives = 64/174 (36%), Gaps = 38/174 (21%)

Query: 92  PRYRI--LSKMGEGTFGQVVEC-----FDNEKKELVAIKIVR--SINKYREAAMIEIDVL 142
           PR  +     +G G FG+VVE         +    VA+K+++  +    +EA M E+ ++
Sbjct: 44  PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIM 103

Query: 143 QRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDL 195
             L +H+     +G   C            + ++ E    G  L +FLR+ S        
Sbjct: 104 SHLGQHENIVNLLGA--CTH-------GGPVLVITEYCCYG-DLLNFLRRKSRVLETDPA 153

Query: 196 VRELGRQLLES------------VAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
                                  +AF+     IH D+   N+LL +    K+ D
Sbjct: 154 FAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGD 207

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 53.7 bits (129), Expect = 2e-08
 Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 25/155 (16%)

Query: 95  RILSKMGEGTFGQVVE---CFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHD 149
            +   +GEG FG V +            VAIK  +  + +  RE  + E   +++   H 
Sbjct: 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-DHP 451

Query: 150 -----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
                IG     +        N + I+ E   LG  L  FL+   +      L+     Q
Sbjct: 452 HIVKLIG--VITE--------NPVWIIMELCTLG-ELRSFLQVRKFSLDLASLI-LYAYQ 499

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           L  ++A++   R +H D+   N+L+ S + VK+ D
Sbjct: 500 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGD 534

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 53.1 bits (128), Expect = 2e-08
 Identities = 33/157 (21%), Positives = 73/157 (46%), Gaps = 26/157 (16%)

Query: 95  RILSKMGEGTFGQVVECF---DNEKKEL-VAIKIVR--SINKYREAAMIEIDVLQRLARH 148
           + +  +G G FG V +     + EK ++ VAIK +R  +  K  +  + E  V+  +  +
Sbjct: 18  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DN 76

Query: 149 D-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGR 201
                 +G   C+         + + ++ +    G  L D++R++        L+     
Sbjct: 77  PHVCRLLG--ICLT--------STVQLITQLMPFG-CLLDYVREHKDNIGSQYLL-NWCV 124

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           Q+ + + ++ + RL+H DL   N+L+ + ++VK+ D+
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 161

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 53.2 bits (128), Expect = 2e-08
 Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 13/151 (8%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAA--MIEIDVLQRLARHD 149
           +  L  +G+GTFG+V+   +       A+KI++   I    E A  + E  VLQ  +RH 
Sbjct: 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHP 208

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
                   ++  F   + +C V E   G  L+  L +   R F  D  R  G +++ ++ 
Sbjct: 209 F----LTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALD 262

Query: 209 FMHELR-LIHTDLKPENILLVSAEYVKVPDY 238
           ++H  + +++ DLK EN++L    ++K+ D+
Sbjct: 263 YLHSEKNVVYRDLKLENLMLDKDGHIKITDF 293

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 52.6 bits (127), Expect = 2e-08
 Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 20/150 (13%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
             L ++G G FG V       + + VAIK+++  +   +  + E  V+  L  H+     
Sbjct: 27  TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNL-SHEKLVQL 84

Query: 150 IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
            G   C +       +  I I+ E    G  L ++LR+  +R     L+ E+ + + E++
Sbjct: 85  YG--VCTK-------QRPIFIITEYMANG-CLLNYLREMRHRFQTQQLL-EMCKDVCEAM 133

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            ++   + +H DL   N L+     VKV D
Sbjct: 134 EYLESKQFLHRDLAARNCLVNDQGVVKVSD 163

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 52.7 bits (127), Expect = 2e-08
 Identities = 35/155 (22%), Positives = 60/155 (38%), Gaps = 24/155 (15%)

Query: 95  RILSKMGEGTFGQVVE---CFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHD 149
            I   +G G  G+V         ++   VAIK ++     + R   + E  ++ +   H 
Sbjct: 52  HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF-DHP 110

Query: 150 -----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
                 G     +            IV E  + G SL  FLR +  +   + LV  + R 
Sbjct: 111 NIIRLEG--VVTR-------GRLAMIVTEYMENG-SLDTFLRTHDGQFTIMQLV-GMLRG 159

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           +   + ++ +L  +H DL   N+L+ S    KV D
Sbjct: 160 VGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSD 194

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 52.6 bits (127), Expect = 3e-08
 Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 20/150 (13%)

Query: 95  RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
           ++L  +G+G FG V+       K  VA+K +++ +   +A + E  V+ +L RH      
Sbjct: 24  KLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKN-DATAQAFLAEASVMTQL-RHSNLVQL 79

Query: 150 IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           +G    +      + +  + IV E    G SL D+LR         D + +    + E++
Sbjct: 80  LG---VI-----VEEKGGLYIVTEYMAKG-SLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 130

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            ++     +H DL   N+L+      KV D
Sbjct: 131 EYLEGNNFVHRDLAARNVLVSEDNVAKVSD 160

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 52.4 bits (126), Expect = 4e-08
 Identities = 33/164 (20%), Positives = 63/164 (38%), Gaps = 29/164 (17%)

Query: 91  TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD- 149
           +   ++L     G FG V +       E VA+KI    +K       E+  L  + +H+ 
Sbjct: 23  SMPLQLLEVKARGRFGCVWKAQLLN--EYVAVKIFPIQDKQSWQNEYEVYSLPGM-KHEN 79

Query: 150 ----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQL 203
               IG     +  +       + ++    + G SL DFL+ N       + +  +   +
Sbjct: 80  ILQFIGA--EKRGTS---VDVDLWLITAFHEKG-SLSDFLKANV---VSWNELCHIAETM 130

Query: 204 LESVAFMHE----------LRLIHTDLKPENILLVSAEYVKVPD 237
              +A++HE            + H D+K +N+LL +     + D
Sbjct: 131 ARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 42/178 (23%), Positives = 63/178 (35%), Gaps = 42/178 (23%)

Query: 92  PRYRI--LSKMGEGTFGQVVEC-----FDNEKKELVAIKIVR--SINKYREAAMIEIDVL 142
           PR R+     +G G FG+VVE        ++    VA+K+++  +    REA M E+ VL
Sbjct: 21  PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 80

Query: 143 QRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDL 195
             L  H      +G   C              ++ E    G  L +FLR+          
Sbjct: 81  SYLGNHMNIVNLLG--ACTI-------GGPTLVITEYCCYG-DLLNFLRRKRDSFICSKT 130

Query: 196 VRELGRQLLESV----------------AFMHELRLIHTDLKPENILLVSAEYVKVPD 237
              +      ++                AF+     IH DL   NILL      K+ D
Sbjct: 131 SPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICD 188

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 41/173 (23%), Positives = 65/173 (37%), Gaps = 37/173 (21%)

Query: 92  PRYRI--LSKMGEGTFGQVVECF--DNEKKELVAIKIVRSINKYREAA--MIEIDVLQRL 145
               I     +GEG FGQV++     +  +   AIK ++      +      E++VL +L
Sbjct: 23  DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKL 82

Query: 146 ARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRE 198
             H      +G   C         R ++ +  E    G +L DFLRK+            
Sbjct: 83  GHHPNIINLLG--ACEH-------RGYLYLAIEYAPHG-NLLDFLRKSRVLETDPAFAIA 132

Query: 199 LG-------RQLLE---SVA----FMHELRLIHTDLKPENILLVSAEYVKVPD 237
                    +QLL     VA    ++ + + IH DL   NIL+      K+ D
Sbjct: 133 NSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIAD 185

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 50.4 bits (121), Expect = 2e-07
 Identities = 37/166 (22%), Positives = 69/166 (41%), Gaps = 35/166 (21%)

Query: 95  RILSKMGEGTFGQVVE-------CFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLA 146
                +G+GTF ++ +        +    +  V +K++   +  Y E+      ++ +L 
Sbjct: 11  IFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL- 69

Query: 147 RHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVREL 199
            H       G   CV         +   +V E  K G SL  +L+KN      +  + E+
Sbjct: 70  SHKHLVLNYG--VCVC-------GDENILVQEFVKFG-SLDTYLKKNKNCINILWKL-EV 118

Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEY--------VKVPD 237
            +QL  ++ F+ E  LIH ++  +NILL+  E         +K+ D
Sbjct: 119 AKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 50.0 bits (120), Expect = 2e-07
 Identities = 33/155 (21%), Positives = 58/155 (37%), Gaps = 23/155 (14%)

Query: 95  RILSKMGEGTFGQVVECF---DNEKKELVAIKIVRSINKYREAA--MIEIDVLQRLARHD 149
                +G G FG V       ++ KK   A+K +  I    E +  + E  +++    H 
Sbjct: 28  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-SHP 86

Query: 150 -----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
                +G                  +V    K G  L +F+R  ++     DL+   G Q
Sbjct: 87  NVLSLLG---IC-----LRSEGSPLVVLPYMKHG-DLRNFIRNETHNPTVKDLIG-FGLQ 136

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           + + + ++   + +H DL   N +L     VKV D
Sbjct: 137 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVAD 171

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 50.1 bits (120), Expect = 2e-07
 Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 24/155 (15%)

Query: 95  RILSKMGEGTFGQVVE---CFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHD 149
            I   +G G FG+V        ++K+  VAIK ++     K R   + E  ++ +   H 
Sbjct: 48  SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-DHP 106

Query: 150 -----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
                 G     +          + IV E  + G SL  FLRK+  +   I LV  + R 
Sbjct: 107 NIIRLEG--VVTK-------SKPVMIVTEYMENG-SLDSFLRKHDAQFTVIQLV-GMLRG 155

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           +   + ++ ++  +H DL   NIL+ S    KV D
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVSD 190

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 49.6 bits (119), Expect = 3e-07
 Identities = 32/148 (21%), Positives = 68/148 (45%), Gaps = 17/148 (11%)

Query: 101 GEGTFGQVV---ECFDNEKKELVAIKIVR-----SINKYREAAMIEIDVLQRLARHD-IG 151
           G G +G+V    +   ++  +L A+K+++        K  E    E  VL+ + +   + 
Sbjct: 63  GTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL- 121

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               V +   F     + ++ + + G  L+  L +     F    V+    +++ ++  +
Sbjct: 122 ----VTLHYAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHL 175

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY 238
           H+L +I+ D+K ENILL S  +V + D+
Sbjct: 176 HKLGIIYRDIKLENILLDSNGHVVLTDF 203

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 49.5 bits (118), Expect = 3e-07
 Identities = 33/159 (20%), Positives = 55/159 (34%), Gaps = 29/159 (18%)

Query: 96  ILSKMGEGTFGQVVEC-FDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD----- 149
           +L  +G G +G V +   D      VA+K+    N+        I  +  +  HD     
Sbjct: 17  LLELIGRGRYGAVYKGSLDERP---VAVKVFSFANRQNFINEKNIYRVPLM-EHDNIARF 72

Query: 150 IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           I G      R   D R    +V E    G SL  +L  ++           L   +   +
Sbjct: 73  IVG--D--ERVTADGRMEYLLVMEYYPNG-SLXKYLSLHT---SDWVSSCRLAHSVTRGL 124

Query: 208 AFMHE---------LRLIHTDLKPENILLVSAEYVKVPD 237
           A++H            + H DL   N+L+ +     + D
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISD 163

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 49.6 bits (119), Expect = 3e-07
 Identities = 35/156 (22%), Positives = 61/156 (39%), Gaps = 25/156 (16%)

Query: 95  RILSKMGEGTFGQVVE----CFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARH 148
                +G G FG+V +        +K+  VAIK ++     K R   + E  ++ +   H
Sbjct: 47  TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-SH 105

Query: 149 D-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGR 201
                  G     +          + I+ E  + G +L  FLR+       + LV  + R
Sbjct: 106 HNIIRLEG--VISK-------YKPMMIITEYMENG-ALDKFLREKDGEFSVLQLV-GMLR 154

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            +   + ++  +  +H DL   NIL+ S    KV D
Sbjct: 155 GIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSD 190

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 49.2 bits (118), Expect = 4e-07
 Identities = 39/176 (22%), Positives = 63/176 (35%), Gaps = 39/176 (22%)

Query: 92  PRYRI--LSKMGEGTFGQVVECF-----DNEKKELVAIKIVRSINKYREAA--MIEIDVL 142
           PR R+     +G G FGQV+E              VA+K+++    + E    M E+ +L
Sbjct: 25  PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL 84

Query: 143 QRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDL 195
             +  H      +G                + ++ E  K G +L  +LR       P  +
Sbjct: 85  IHIGHHLNVVNLLG---AC-----TKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKV 135

Query: 196 VRELGRQLLESV--------------AFMHELRLIHTDLKPENILLVSAEYVKVPD 237
             E   +   ++               F+   + IH DL   NILL     VK+ D
Sbjct: 136 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD 191

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 47.9 bits (115), Expect = 1e-06
 Identities = 34/154 (22%), Positives = 71/154 (46%), Gaps = 18/154 (11%)

Query: 95  RILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRS---INKYREAA--MIEIDVLQRLA 146
            +L  +G+G +G+V    +       ++ A+K+++    +   ++ A    E ++L+   
Sbjct: 20  ELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEE-V 78

Query: 147 RHD-IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
           +H  I     V +   F     + ++ E L G  L+  L +     F  D       ++ 
Sbjct: 79  KHPFI-----VDLIYAFQTGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEIS 131

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            ++  +H+  +I+ DLKPENI+L    +VK+ D+
Sbjct: 132 MALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDF 165

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 33/178 (18%), Positives = 68/178 (38%), Gaps = 42/178 (23%)

Query: 92  PRYRI--LSKMGEGTFGQVVEC-------FDNEKKELVAIKIVRSINKYREAA--MIEID 140
           PR R+     +GEG FGQVV             +   VA+K+++S    ++ +  + E++
Sbjct: 67  PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEME 126

Query: 141 VLQRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPI 193
           +++ + +H      +G   C Q          + ++ E    G +L ++L+         
Sbjct: 127 MMKMIGKHKNIINLLG--ACTQ-------DGPLYVIVEYASKG-NLREYLQARRPPGLEY 176

Query: 194 DLVRELG-------RQLLESV-------AFMHELRLIHTDLKPENILLVSAEYVKVPD 237
                         + L+           ++   + IH DL   N+L+     +K+ D
Sbjct: 177 SYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIAD 234

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 34/169 (20%), Positives = 60/169 (35%), Gaps = 33/169 (19%)

Query: 92  PRYRI--LSKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKYREAA--MIEIDVL 142
            R +I    ++G+G+FG V E        +E +  VAIK V      RE    + E  V+
Sbjct: 23  AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82

Query: 143 QRLARHDIGGTR----CVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLV 196
           +    H +   R      Q            ++ E    G  L  +LR          ++
Sbjct: 83  KEFNCHHV--VRLLGVVSQ-------GQPTLVIMELMTRG-DLKSYLRSLRPAMANNPVL 132

Query: 197 RELGRQLLESVA--------FMHELRLIHTDLKPENILLVSAEYVKVPD 237
                  +  +A        +++  + +H DL   N ++     VK+ D
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGD 181

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 46.9 bits (112), Expect = 2e-06
 Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 24/165 (14%)

Query: 92  PRYRI--LSKMGEGTFGQVVECF---DNEKKELVAIKIVR---SINKYREAAMIEIDVLQ 143
           P  +      +G+G FG V E     ++     VA+K+++     +   E  + E   ++
Sbjct: 21  PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMK 80

Query: 144 RLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDL- 195
               H      +G                  ++    K G  L+ FL  +     P +L 
Sbjct: 81  EF-DHPHVAKLVG---VSLRSRAKGRLPIPMVILPFMKHG-DLHAFLLASRIGENPFNLP 135

Query: 196 VREL---GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           ++ L      +   + ++     IH DL   N +L     V V D
Sbjct: 136 LQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVAD 180

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 46.5 bits (111), Expect = 4e-06
 Identities = 37/184 (20%), Positives = 65/184 (35%), Gaps = 49/184 (26%)

Query: 92  PRYRI--LSKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKYREAA--MIEIDVL 142
           PR  +     +G G FG+V+               VA+K+++      E    M E+ ++
Sbjct: 43  PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMM 102

Query: 143 QRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDL 195
            +L  H+     +G   C            I ++FE    G  L ++LR    +    ++
Sbjct: 103 TQLGSHENIVNLLGA--CTL-------SGPIYLIFEYCCYG-DLLNYLRSKREKFSEDEI 152

Query: 196 VRELGRQLLESV---------------------AFMHELRLIHTDLKPENILLVSAEYV- 233
             E  ++L E                        F+     +H DL   N+ LV+   V 
Sbjct: 153 EYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNV-LVTHGKVV 211

Query: 234 KVPD 237
           K+ D
Sbjct: 212 KICD 215

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 46.0 bits (110), Expect = 4e-06
 Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 16/151 (10%)

Query: 96  ILSKMGEGTFGQVV---ECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHD 149
           +L  +G+G+FG+V    +   ++ ++L A+K+++      + R    +E D+L     H 
Sbjct: 28  LLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVE-VNHP 86

Query: 150 -IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
            I     V++   F     + ++ + L G  L+  L K     F  + V+    +L  ++
Sbjct: 87  FI-----VKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALAL 139

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
             +H L +I+ DLKPENILL    ++K+ D+
Sbjct: 140 DHLHSLGIIYRDLKPENILLDEEGHIKLTDF 170

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 46.2 bits (110), Expect = 4e-06
 Identities = 35/178 (19%), Positives = 73/178 (41%), Gaps = 42/178 (23%)

Query: 92  PRYRI--LSKMGEGTFGQVVEC-------FDNEKKELVAIKIVRSINKYREAA--MIEID 140
           PR ++     +GEG FGQVV            ++   VA+K+++     ++ +  + E++
Sbjct: 79  PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEME 138

Query: 141 VLQRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNS--YRSF 191
           +++ + +H      +G   C Q          + ++ E    G +L ++LR        +
Sbjct: 139 MMKMIGKHKNIINLLG--ACTQ-------DGPLYVIVEYASKG-NLREYLRARRPPGMEY 188

Query: 192 PIDLVRELGRQLLES--------VA----FMHELRLIHTDLKPENILLVSAEYVKVPD 237
             D+ R    Q+           +A    ++   + IH DL   N+L+     +K+ D
Sbjct: 189 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIAD 246

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 45.7 bits (109), Expect = 5e-06
 Identities = 32/178 (17%), Positives = 68/178 (38%), Gaps = 42/178 (23%)

Query: 92  PRYRI--LSKMGEGTFGQVVEC-------FDNEKKELVAIKIVRSINKYREAA--MIEID 140
           PR ++     +GEG FGQVV            ++   VA+K+++     ++ +  + E++
Sbjct: 33  PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEME 92

Query: 141 VLQRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPI 193
           +++ + +H      +G   C Q          + ++ E    G +L ++LR         
Sbjct: 93  MMKMIGKHKNIINLLG--ACTQ-------DGPLYVIVEYASKG-NLREYLRARRPPGMEY 142

Query: 194 DLVRELG-------RQLLESV-------AFMHELRLIHTDLKPENILLVSAEYVKVPD 237
                         + L+           ++   + IH DL   N+L+     +K+ D
Sbjct: 143 SYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIAD 200

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 45.8 bits (109), Expect = 6e-06
 Identities = 38/174 (21%), Positives = 63/174 (36%), Gaps = 39/174 (22%)

Query: 92  PRYRI--LSKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQ 143
            R  I    ++GEG FG+V           + K LVA+K ++  +   R+    E ++L 
Sbjct: 39  KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLT 98

Query: 144 RLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLV 196
            L +H       G   C +          + +VFE  + G  L  FLR +   +  +   
Sbjct: 99  ML-QHQHIVRFFG--VCTE-------GRPLLMVFEYMRHG-DLNRFLRSHGPDAKLLAGG 147

Query: 197 RELGRQLLESVAFMH-------------ELRLIHTDLKPENILLVSAEYVKVPD 237
            ++    L     +               L  +H DL   N L+     VK+ D
Sbjct: 148 EDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGD 201

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 45.7 bits (109), Expect = 6e-06
 Identities = 32/165 (19%), Positives = 60/165 (36%), Gaps = 25/165 (15%)

Query: 92  PRYRI--LSKMGEGTFGQVVECF---DNEKKELVAIKIVRSIN---KYREAAMIEIDVLQ 143
            R  +     +GEG FG V+E     ++     VA+K ++  N   +  E  + E   ++
Sbjct: 32  DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMK 91

Query: 144 RLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDL- 195
               H      +G    V I           ++    K G  L+ +L  +   + P  + 
Sbjct: 92  DF-SHPNVIRLLG----VCIEMSSQGIPKPMVILPFMKYG-DLHTYLLYSRLETGPKHIP 145

Query: 196 VREL---GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           ++ L      +   + ++     +H DL   N +L     V V D
Sbjct: 146 LQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVAD 190

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 45.3 bits (108), Expect = 8e-06
 Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 23/155 (14%)

Query: 95  RILSKMGEGTFGQVVECF---DNEKKELVAIKIVRSINKYREAA--MIEIDVLQRLARHD 149
                +G+G FG V         + +   AIK +  I + ++    + E  +++ L  H 
Sbjct: 24  HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL-NHP 82

Query: 150 -----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
                IG    +             ++      G  L  F+R         DL+   G Q
Sbjct: 83  NVLALIG---IM-----LPPEGLPHVLLPYMCHG-DLLQFIRSPQRNPTVKDLI-SFGLQ 132

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           +   + ++ E + +H DL   N +L  +  VKV D
Sbjct: 133 VARGMEYLAEQKFVHRDLAARNCMLDESFTVKVAD 167

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* Length = 258

 Score = 43.1 bits (101), Expect = 3e-05
 Identities = 21/130 (16%), Positives = 45/130 (34%), Gaps = 9/130 (6%)

Query: 99  KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI 158
           ++    F ++ E    +++    ++ +    K       E   L+R       G    Q 
Sbjct: 83  RIETSEFDKMDEYLYGDER--FDMRRISPKEKVFIWTEKEFRNLERAKEA---GVSVPQP 137

Query: 159 RNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH-ELRLIH 217
              + Y  ++ ++       L         R      V  +   ++E+V  ++ E  L+H
Sbjct: 138 ---YTYMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVH 194

Query: 218 TDLKPENILL 227
            DL   NI+ 
Sbjct: 195 ADLSEYNIMY 204

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 38/175 (21%), Positives = 63/175 (36%), Gaps = 40/175 (22%)

Query: 92  PRYRI--LSKMGEGTFGQVVEC-----FDNEKKELVAIKIVRSINKYREAA-MIEIDVLQ 143
            R  I    ++GEG FG+V           + K LVA+K ++            E ++L 
Sbjct: 13  KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLT 72

Query: 144 RLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDLV 196
            L +H+      G   C          + + +VFE  K G  L  FLR +   +  +   
Sbjct: 73  NL-QHEHIVKFYG--VCGD-------GDPLIMVFEYMKHG-DLNKFLRAHGPDAMILVDG 121

Query: 197 RELGR-------QLLESV-------AFMHELRLIHTDLKPENILLVSAEYVKVPD 237
           +           Q+L           ++     +H DL   N L+ +   VK+ D
Sbjct: 122 QPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGD 176

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 43.0 bits (102), Expect = 5e-05
 Identities = 33/176 (18%), Positives = 62/176 (35%), Gaps = 41/176 (23%)

Query: 92  PRYRI--LSKMGEGTFGQVVEC-----FDNEKKELVAIKIVR--SINKYREAAMIEIDVL 142
               +  + ++GE  FG+V +         E+ + VAIK ++  +    RE    E  + 
Sbjct: 7   SLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLR 66

Query: 143 QRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDL 195
            RL +H      +G     +          + ++F     G  L++FL   S  S     
Sbjct: 67  ARL-QHPNVVCLLG--VVTK-------DQPLSMIFSYCSHG-DLHEFLVMRSPHSDVGST 115

Query: 196 VRELG-------RQLLESV-------AFMHELRLIHTDLKPENILLVSAEYVKVPD 237
             +            +  V        ++    ++H DL   N+L+     VK+ D
Sbjct: 116 DDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISD 171

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 41/211 (19%), Positives = 69/211 (32%), Gaps = 58/211 (27%)

Query: 66  PRTGSPPWRPDDKDGHYVFAIGENLTPRYRI--LSKMGEGTFGQVVEC-----FDNEKKE 118
           P     P   + K     +       PR  I  +  +GEG FG+V +         E   
Sbjct: 26  PMYQRMPLLLNPKLLSLEY-------PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFT 78

Query: 119 LVAIKIVRSI--NKYREAAMIEIDVLQRLARHD-----IGGTRCVQIRNWFDYRNHICIV 171
           +VA+K+++       +     E  ++     +      +G   C            +C++
Sbjct: 79  MVAVKMLKEEASADMQADFQREAALMAEF-DNPNIVKLLG--VCAV-------GKPMCLL 128

Query: 172 FE--KLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV---------------------- 207
           FE    G  L +FLR  S  +       +L  +   S                       
Sbjct: 129 FEYMAYG-DLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGM 187

Query: 208 AFMHELRLIHTDLKPENILLVSAEY-VKVPD 237
           A++ E + +H DL   N  LV     VK+ D
Sbjct: 188 AYLSERKFVHRDLATRNC-LVGENMVVKIAD 217

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 38/184 (20%), Positives = 64/184 (34%), Gaps = 49/184 (26%)

Query: 92  PRYRI--LSKMGEGTFGQVVECF-----DNEKKELVAIKIVRSINKYREAA--MIEIDVL 142
           PR  +     +GEG FG+VV+              VA+K+++      E    + E +VL
Sbjct: 21  PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVL 80

Query: 143 QRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSFPIDL 195
           +++  H       G   C Q          + ++ E  K G SL  FLR++         
Sbjct: 81  KQV-NHPHVIKLYGA--CSQ-------DGPLLLIVEYAKYG-SLRGFLRESRKVGPGYLG 129

Query: 196 VRELGRQLLESV----------------------AFMHELRLIHTDLKPENILLVSAEYV 233
                                              ++ E++L+H DL   NIL+     +
Sbjct: 130 SGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKM 189

Query: 234 KVPD 237
           K+ D
Sbjct: 190 KISD 193

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 4e-04
 Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 24/91 (26%)

Query: 142 LQRLARHDIGGTRCVQIRNWFD-------YRNHICI---VFEKLGPSLYDFLRK---NSY 188
           L++  RHD   T      +  +       Y+ +IC     +E+L  ++ DFL K   N  
Sbjct: 503 LEQKIRHD--STAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLI 560

Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTD 219
            S   DL+R         +A M E   I  +
Sbjct: 561 CSKYTDLLR---------IALMAEDEAIFEE 582

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 37/171 (21%), Positives = 63/171 (36%), Gaps = 37/171 (21%)

Query: 92  PRYRI--LSKMGEGTFGQVVECF-----DNEKKELVAIKIVRSINKYREAA--MIEIDVL 142
           PR  I  +  +G G FG+V E       ++     VA+K +  +   ++    ++E  ++
Sbjct: 28  PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALII 87

Query: 143 QRLARHD-----IGGTRCVQIRNWFDYRNHICIVFE--KLGPSLYDFLRKNSYRSF---- 191
            +   H      IG    +Q            I+ E    G  L  FLR+   R      
Sbjct: 88  SKF-NHQNIVRCIG--VSLQ-------SLPRFILMELMAGG-DLKSFLRETRPRPSQPSS 136

Query: 192 --PIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY---VKVPD 237
              +DL+  + R +     ++ E   IH D+   N LL         K+ D
Sbjct: 137 LAMLDLLH-VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGD 186

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	264
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.98
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.98
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.98
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.98
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.98
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.98
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.98
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.98
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.98
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.98
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.98
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.98
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.98
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.98
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.98
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.98
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.98
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.98
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.98
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.98
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.98
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.98
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.98
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.98
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.98
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.98
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.98
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.98
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.98
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.98
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.98
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.98
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.98
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.98
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.98
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.98
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.97
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.97
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.97
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.97
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.97
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.97
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.97
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.97
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.97
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.97
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.97
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.97
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.97
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.97
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.97
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.97
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.97
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.97
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.97
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.97
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.97
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.97
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.97
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.97
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.97
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.97
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.97
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.97
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.97
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.97
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.97
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.97
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.97
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.97
3uqc_A	286	Probable conserved transmembrane protein; structur	99.97
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.97
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.97
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.97
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.97
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.97
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.97
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.97
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.97
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.97
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.97
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.97
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.97
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.97
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.97
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.97
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.97
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.97
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.97
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.97
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.97
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.97
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.97
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.96
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.96
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.96
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.96
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.96
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.95
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.94
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.92
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.84
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.57
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.46
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.35
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	99.1
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	99.08
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.99
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.94
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.78
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.71
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.68
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.52
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.51
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	98.32
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	98.31
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	98.2
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	98.14
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	98.03
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.94
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	97.9
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.9
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	97.72
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	97.69
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	97.62
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	97.6
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	97.54
3mes_A	424	Choline kinase; malaria, structural genomics, stru	96.75
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	96.34
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	87.52
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	85.86
1cja_A	342	Protein (actin-fragmin kinase); transferase; HET:	81.87

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.3e-45  Score=310.03  Aligned_cols=166  Identities=23%  Similarity=0.360  Sum_probs=145.9

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ++|+++++||+|+||+||+|+++.+|+.||||++++.   ....+.+.+|+++++.++|+||     |+++++|++++.+
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnI-----V~~~~~~~~~~~~   98 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNI-----VQYRESFEENGSL   98 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEEEETTEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCC-----CcEEEEEEECCEE
Confidence            6899999999999999999999999999999999753   3456788999999999999988     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-  246 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-  246 (264)
                      ||||||| ||+|.+++...+...+++..++.|+.||+.||+|||++||+||||||+||||+.+|++||+|||+|+.... 
T Consensus        99 yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~  178 (350)
T 4b9d_A           99 YIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST  178 (350)
T ss_dssp             EEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence            9999999 99999999877656789999999999999999999999999999999999999999999999999987653 


Q ss_pred             -----CcccceeeeeceeEee
Q 024661          247 -----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 -----~~~~~~~y~ape~~~~  262 (264)
                           ..+||+.|||||++.+
T Consensus       179 ~~~~~~~~GT~~YmAPE~l~~  199 (350)
T 4b9d_A          179 VELARACIGTPYYLSPEICEN  199 (350)
T ss_dssp             HHHHHHHHSCCTTCCHHHHTT
T ss_pred             cccccccCCCccccCHHHHCC
Confidence                 2359999999998754

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=9.2e-46  Score=306.29  Aligned_cols=164  Identities=23%  Similarity=0.294  Sum_probs=149.7

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++++.||+|+||+||+|+++.+|+.||+|++.+..    ...+.+.+|+++++.++|+|+     ++++++|++++.
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnI-----v~l~~~~~~~~~  106 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF-----VKLYFTFQDDEK  106 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTB-----CCEEEEEECSSE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEEeCCE
Confidence            56999999999999999999999999999999998542    345678999999999999888     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC-
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH-  245 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~-  245 (264)
                      +||||||+ ||+|.+++.+..  .+++..++.|+.||+.||+|||++||+||||||+|||++.++++||+|||+|+... 
T Consensus       107 ~yivmEy~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~  184 (311)
T 4aw0_A          107 LYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP  184 (311)
T ss_dssp             EEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EEEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence            99999999 999999998875  79999999999999999999999999999999999999999999999999997542 


Q ss_pred             -------CCcccceeeeeceeEee
Q 024661          246 -------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 -------~~~~~~~~y~ape~~~~  262 (264)
                             ...+||+.|||||++.+
T Consensus       185 ~~~~~~~~~~~GTp~YmAPEvl~~  208 (311)
T 4aw0_A          185 ESKQARANSFVGTAQYVSPELLTE  208 (311)
T ss_dssp             TTTCCCBCCCCSCGGGCCHHHHHH
T ss_pred             CCCcccccCcccCcccCCHHHHcC
Confidence                   23369999999998753

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1e-44  Score=295.94  Aligned_cols=164  Identities=26%  Similarity=0.421  Sum_probs=139.7

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++.+.||+|+||+||+|.++.+|+.||+|++++..    .....+.+|+++++.++|+|+     +++++++.+++.
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnI-----v~~~~~~~~~~~   87 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHI-----IKLYDVIKSKDE   87 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTB-----CCEEEEEECSSE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCC-----CeEEEEEEECCE
Confidence            57999999999999999999999999999999997532    335678899999999999988     999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-
Q 024661          168 ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-  246 (264)
Q Consensus       168 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-  246 (264)
                      +|+||||++|+|.+++.+..  .+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+|+.... 
T Consensus        88 ~~ivmEy~~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~  165 (275)
T 3hyh_A           88 IIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG  165 (275)
T ss_dssp             EEEEEECCCEEHHHHHHHSC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred             EEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence            99999999999999998865  799999999999999999999999999999999999999999999999999976432 


Q ss_pred             ----CcccceeeeeceeEee
Q 024661          247 ----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ----~~~~~~~y~ape~~~~  262 (264)
                          ..+||+.|||||++.+
T Consensus       166 ~~~~~~~GT~~Y~APE~~~~  185 (275)
T 3hyh_A          166 NFLKTSCGSPNYAAPEVISG  185 (275)
T ss_dssp             ---------CTTSCHHHHSS
T ss_pred             CccCCeeECcccCChhhhcC
Confidence                3469999999998754

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.1e-44  Score=304.11  Aligned_cols=163  Identities=22%  Similarity=0.307  Sum_probs=147.9

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      +.|+++++||+|+||+||+|+++.+|+.||||+++... ...+.+.+|+.+++.++|+||     |+++++|.+++.+||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnI-----V~l~~~~~~~~~~~i  148 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV-----VEMYNSYLVGDELWV  148 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTB-----CCEEEEEEETTEEEE
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCC-----CcEEEEEEECCEEEE
Confidence            56999999999999999999999999999999997543 344567899999999999988     999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC----
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH----  245 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~----  245 (264)
                      ||||| ||+|.+++...   .+++..++.|+.||+.||+|||++||+||||||+||||+.+|++||+|||+|+...    
T Consensus       149 vmEy~~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~  225 (346)
T 4fih_A          149 VMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP  225 (346)
T ss_dssp             EECCCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred             EEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC
Confidence            99999 99999999864   59999999999999999999999999999999999999999999999999997543    


Q ss_pred             --CCcccceeeeeceeEee
Q 024661          246 --AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 --~~~~~~~~y~ape~~~~  262 (264)
                        ...+||+.|||||++.+
T Consensus       226 ~~~~~~GTp~YmAPEvl~~  244 (346)
T 4fih_A          226 RRKSLVGTPYWMAPELISR  244 (346)
T ss_dssp             CBCCCCSCGGGCCHHHHTT
T ss_pred             cccccccCcCcCCHHHHCC
Confidence              23469999999998753

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=9.5e-45  Score=311.55  Aligned_cols=164  Identities=22%  Similarity=0.305  Sum_probs=148.5

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      .++|+++++||+|+||.||+|+++.+|+.||||+++... ...+.+.+|+.+++.++|+||     |+++++|.+++.+|
T Consensus       150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnI-----V~l~~~~~~~~~~~  224 (423)
T 4fie_A          150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV-----VEMYNSYLVGDELW  224 (423)
T ss_dssp             GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTB-----CCEEEEEEETTEEE
T ss_pred             hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCC-----CceEEEEEECCEEE
Confidence            357999999999999999999999999999999997533 345668899999999999988     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC--
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA--  246 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~--  246 (264)
                      |||||| ||+|.+++...   .+++..++.|+.||+.||+|||++||+||||||+||||+.+|.+||+|||+|+....  
T Consensus       225 iVmEy~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~  301 (423)
T 4fie_A          225 VVMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV  301 (423)
T ss_dssp             EEEECCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred             EEEeCCCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence            999999 99999999764   599999999999999999999999999999999999999999999999999975432  


Q ss_pred             ----CcccceeeeeceeEee
Q 024661          247 ----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ----~~~~~~~y~ape~~~~  262 (264)
                          ..+||+.|||||++.+
T Consensus       302 ~~~~~~~GTp~YmAPEvl~~  321 (423)
T 4fie_A          302 PRRKSLVGTPYWMAPELISR  321 (423)
T ss_dssp             CCBCCCEECTTTCCHHHHTT
T ss_pred             ccccccccCcCcCCHHHHCC
Confidence                3469999999998753

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=7.3e-44  Score=298.19  Aligned_cols=160  Identities=24%  Similarity=0.271  Sum_probs=143.8

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      +.|++.++||+|+||.||+|+++.+|+.||||+++....    ..+|+.+++.++|+|+     |++++++.+++.+|||
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnI-----V~l~~~~~~~~~~~iv  128 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRI-----VPLYGAVREGPWVNIF  128 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTB-----CCEEEEEEETTEEEEE
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCC-----CcEEEEEEECCEEEEE
Confidence            569999999999999999999999999999999986432    2469999999999888     9999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC-cEEeccCCCCCcCCC---
Q 024661          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE-YVKVPDYKVPSPRHA---  246 (264)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~-~v~l~Dfg~a~~~~~---  246 (264)
                      |||| ||+|.+++....  .+++..++.|+.||+.||+|||++||+||||||+||||+.+| ++||+|||+|+....   
T Consensus       129 mEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~  206 (336)
T 4g3f_A          129 MELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL  206 (336)
T ss_dssp             ECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-----
T ss_pred             EeccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc
Confidence            9999 999999998875  799999999999999999999999999999999999999987 699999999975432   


Q ss_pred             --------CcccceeeeeceeEee
Q 024661          247 --------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 --------~~~~~~~y~ape~~~~  262 (264)
                              ..+||+.|||||++.+
T Consensus       207 ~~~~~~~~~~~GT~~YmAPE~~~~  230 (336)
T 4g3f_A          207 GKSLLTGDYIPGTETHMAPEVVMG  230 (336)
T ss_dssp             -------CCCCCCGGGCCHHHHTT
T ss_pred             ccceecCCccccCccccCHHHHCC
Confidence                    2368999999998754

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=8.1e-43  Score=287.02  Aligned_cols=166  Identities=25%  Similarity=0.382  Sum_probs=145.9

Q ss_pred             ccCCCe-EEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           89 NLTPRY-RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        89 ~~~~~y-~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ...++| ++.++||+|+||+||+|.++.+++.||+|++...   ....+.+.+|+++++.++|||+     |+++++|.+
T Consensus        22 ~~~gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnI-----V~~~~~~~~   96 (290)
T 3fpq_A           22 SNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI-----VRFYDSWES   96 (290)
T ss_dssp             CTTSSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTB-----CCEEEEEEE
T ss_pred             CCCCceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCC-----CcEEEEEee
Confidence            444566 7888999999999999999999999999999743   3445778999999999999988     999999876


Q ss_pred             ----CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEeec-CCcEEec
Q 024661          165 ----RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVS-AEYVKVP  236 (264)
Q Consensus       165 ----~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dikp~Nili~~-~~~v~l~  236 (264)
                          ++.+||||||| +|+|.+++.+..  .+++..++.|+.||+.||+|||++|  |+||||||+|||++. ++.+||+
T Consensus        97 ~~~~~~~~~lvmEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~  174 (290)
T 3fpq_A           97 TVKGKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIG  174 (290)
T ss_dssp             EETTEEEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEEC
T ss_pred             ccCCCcEEEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEE
Confidence                46789999999 999999998865  7999999999999999999999998  999999999999984 7999999


Q ss_pred             cCCCCCcCCC----CcccceeeeeceeEe
Q 024661          237 DYKVPSPRHA----FSFQTFLSMASRVYI  261 (264)
Q Consensus       237 Dfg~a~~~~~----~~~~~~~y~ape~~~  261 (264)
                      |||+|+....    ..+||+.|||||++.
T Consensus       175 DFGla~~~~~~~~~~~~GTp~YmAPE~~~  203 (290)
T 3fpq_A          175 DLGLATLKRASFAKAVIGTPEFMAPEMYE  203 (290)
T ss_dssp             CTTGGGGCCTTSBEESCSSCCCCCGGGGG
T ss_pred             eCcCCEeCCCCccCCcccCccccCHHHcC
Confidence            9999976433    336899999999764

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.3e-42  Score=287.74  Aligned_cols=166  Identities=26%  Similarity=0.316  Sum_probs=138.1

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC---
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN---  166 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~---  166 (264)
                      ++|++++.||+|+||+||+|+++.+|+.||||+++..  ....+.+.+|+++++.++|+|+     ++++++|.+.+   
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnI-----V~~~~~~~~~~~~~   79 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI-----VRYFNAWLEKNTTE   79 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEEEEEC---
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEEecCccc
Confidence            4599999999999999999999999999999998743  3445778999999999999988     99999987644   


Q ss_pred             ---------EEEEEEecC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEe
Q 024661          167 ---------HICIVFEKL-GPSLYDFLRKNSY-RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV  235 (264)
Q Consensus       167 ---------~~~lv~e~~-~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l  235 (264)
                               ++|+||||| +|+|.+++..... ...++..++.|+.||+.||+|||++||+||||||+|||++.++.+||
T Consensus        80 ~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl  159 (299)
T 4g31_A           80 KLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKV  159 (299)
T ss_dssp             -------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEE
T ss_pred             cccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEE
Confidence                     479999999 9999999986541 23456778999999999999999999999999999999999999999


Q ss_pred             ccCCCCCcCCC------------------CcccceeeeeceeEee
Q 024661          236 PDYKVPSPRHA------------------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       236 ~Dfg~a~~~~~------------------~~~~~~~y~ape~~~~  262 (264)
                      +|||+|+....                  ..+||+.|||||++.+
T Consensus       160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~  204 (299)
T 4g31_A          160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG  204 (299)
T ss_dssp             CCCCCC--------------------------CCCTTSCHHHHTT
T ss_pred             ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcC
Confidence            99999976432                  2358999999998754

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=1e-43  Score=293.79  Aligned_cols=164  Identities=26%  Similarity=0.383  Sum_probs=140.0

Q ss_pred             CCeEEEeecccCccEEEEEEEeC---CCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      ++|++++.||+|+||+||+|++.   .+++.||+|++++..   .....+.+|+++++.++|+|+     ++++++|+++
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnI-----v~l~~~~~~~   98 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFI-----VKLHYAFQTE   98 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTE-----ECEEEEEEET
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCC-----CeEEEEEEEC
Confidence            56999999999999999999874   467899999997432   233467889999999988887     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      +.+||||||| ||+|.+++.+..  .+++..++.|+.||+.||+|||++||+||||||+|||++.+|++||+|||+|+..
T Consensus        99 ~~~~ivmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~  176 (304)
T 3ubd_A           99 GKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKES  176 (304)
T ss_dssp             TEEEEEECCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred             CEEEEEEEcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence            9999999999 999999999876  7999999999999999999999999999999999999999999999999999753


Q ss_pred             C------CCcccceeeeeceeEee
Q 024661          245 H------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       245 ~------~~~~~~~~y~ape~~~~  262 (264)
                      .      ...+||+.|||||++.+
T Consensus       177 ~~~~~~~~~~~GT~~YmAPE~~~~  200 (304)
T 3ubd_A          177 IDHEKKAYSFCGTVEYMAPEVVNR  200 (304)
T ss_dssp             ----CCCCSCCCCGGGCCHHHHHT
T ss_pred             cCCCccccccccCcccCCHHHhcc
Confidence            2      23469999999998753

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.6e-42  Score=296.26  Aligned_cols=167  Identities=21%  Similarity=0.374  Sum_probs=147.8

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee-
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-  164 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~-  164 (264)
                      .+.++|++++.||+|+||+||+|.++.+|+.||||++++.   ....+.+.+|+++|+.++|+|+     +++++++.. 
T Consensus        51 ~i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnI-----v~l~~~~~~~  125 (398)
T 4b99_A           51 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNI-----IAIKDILRPT  125 (398)
T ss_dssp             CCCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTB-----CCEEEECCCS
T ss_pred             CCCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCc-----ceEeeeeecc
Confidence            4567899999999999999999999999999999999743   2345678899999999999988     999988754 


Q ss_pred             -----CCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          165 -----RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       165 -----~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                           .+.+|||||||+|+|.+++....  .+++..++.|+.||+.||+|||++||+||||||+|||++.+|.+||+|||
T Consensus       126 ~~~~~~~~~~ivmE~~~g~L~~~i~~~~--~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFG  203 (398)
T 4b99_A          126 VPYGEFKSVYVVLDLMESDLHQIIHSSQ--PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFG  203 (398)
T ss_dssp             SCTTTCCCEEEEEECCSEEHHHHHTSSS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred             cccccCCEEEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecc
Confidence                 46899999999889999998765  89999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCC----------CCcccceeeeeceeEee
Q 024661          240 VPSPRH----------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       240 ~a~~~~----------~~~~~~~~y~ape~~~~  262 (264)
                      +|+...          ...+||..|||||++.+
T Consensus       204 la~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~  236 (398)
T 4b99_A          204 MARGLCTSPAEHQYFMTEYVATRWYRAPELMLS  236 (398)
T ss_dssp             TCBCC-------CCCCCSSCCCCTTCCHHHHTT
T ss_pred             eeeecccCccccccccccceeChHhcCHHHhcC
Confidence            997532          23479999999998754

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.8e-41  Score=284.23  Aligned_cols=166  Identities=21%  Similarity=0.302  Sum_probs=140.7

Q ss_pred             CCeEEEeecccCccEEEEEEEeC-----CCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      ++|.+.++||+|+||+||+|++.     .+++.||||+++.. ....+.+.+|++++++++|+|+     |++++++.+.
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnI-----V~l~g~~~~~  115 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHI-----VRFFGVCTEG  115 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEECSS
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCC-----CcEEEEEEEC
Confidence            56999999999999999999865     35789999999743 3456789999999999999988     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcC-------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNS-------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~-------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~  231 (264)
                      +.+||||||| +|+|.+++....             ...+++..++.|+.||+.||+|||+++||||||||+|||++.++
T Consensus       116 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~  195 (329)
T 4aoj_A          116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGL  195 (329)
T ss_dssp             SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTT
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCC
Confidence            9999999999 999999997642             13589999999999999999999999999999999999999999


Q ss_pred             cEEeccCCCCCcCCC--------CcccceeeeeceeEee
Q 024661          232 YVKVPDYKVPSPRHA--------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       232 ~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~~  262 (264)
                      ++||+|||+|+....        ...+|..|||||++.+
T Consensus       196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~  234 (329)
T 4aoj_A          196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY  234 (329)
T ss_dssp             EEEECCCC----------------CCCCGGGCCHHHHTT
T ss_pred             cEEEcccccceeccCCCcceecCcccccccccChhhhcC
Confidence            999999999975422        2357889999998653

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=9.5e-42  Score=282.34  Aligned_cols=166  Identities=20%  Similarity=0.312  Sum_probs=143.1

Q ss_pred             CCCeEEEeecccCccEEEEEEEeC-----CCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      .++|.+.++||+|+||+||+|++.     .++..||||+++.. ....+.+.+|++++++++|+|+     |++++++.+
T Consensus        12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnI-----V~l~g~~~~   86 (299)
T 4asz_A           12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI-----VKFYGVCVE   86 (299)
T ss_dssp             GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEECS
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCC-----ccEEEEEee
Confidence            357999999999999999999875     35788999999753 3456789999999999999988     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcC-----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNS-----------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY  232 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~-----------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~  232 (264)
                      .+.+||||||| +|+|.+++....           ...+++..++.|+.||+.||+|||+++|+||||||+|||++.+++
T Consensus        87 ~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~  166 (299)
T 4asz_A           87 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL  166 (299)
T ss_dssp             SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGC
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCc
Confidence            99999999999 999999997632           346999999999999999999999999999999999999999999


Q ss_pred             EEeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          233 VKVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       233 v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      +||+|||+|+....        ...+|..|||||++.
T Consensus       167 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~  203 (299)
T 4asz_A          167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIM  203 (299)
T ss_dssp             EEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHH
T ss_pred             EEECCcccceecCCCCceeecCceecChhhcCHHHHc
Confidence            99999999975322        224788899999864

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=2.2e-41  Score=280.46  Aligned_cols=162  Identities=24%  Similarity=0.367  Sum_probs=139.9

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEec---hhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      -.+++++.++||+|+||+||+|++..   .||||+++.   .....+.+.+|+.+++.++|+|+     +++++++.. +
T Consensus        34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNI-----V~l~g~~~~-~  104 (307)
T 3omv_A           34 EASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNI-----LLFMGYMTK-D  104 (307)
T ss_dssp             CTTSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEECS-S
T ss_pred             cHHHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEEC-C
Confidence            34678999999999999999998753   489999873   23456789999999999999988     999998754 5


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      .+||||||| +|+|.+++.... ..+++..+..|+.||+.||+|||+++||||||||+|||+++++++||+|||+|+...
T Consensus       105 ~~~iVmEy~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~  183 (307)
T 3omv_A          105 NLAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS  183 (307)
T ss_dssp             SCEEEEECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC--
T ss_pred             eEEEEEEcCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecc
Confidence            689999999 999999998654 469999999999999999999999999999999999999999999999999997543


Q ss_pred             C--------CcccceeeeeceeEe
Q 024661          246 A--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ~--------~~~~~~~y~ape~~~  261 (264)
                      .        ...||+.|||||++.
T Consensus       184 ~~~~~~~~~~~~GT~~ymAPE~l~  207 (307)
T 3omv_A          184 RWSGSQQVEQPTGSVLWMAPEVIR  207 (307)
T ss_dssp             ----------CCCCTTSCCHHHHH
T ss_pred             cCCcceeecccccCCCccCHHHhh
Confidence            2        236899999999875

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=6.5e-41  Score=278.47  Aligned_cols=168  Identities=21%  Similarity=0.249  Sum_probs=144.2

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeC-----CCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEcee
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNW  161 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~  161 (264)
                      .-.+.+++.++||+|+||+||+|.+.     .+++.||||+++..  ....+.+.+|+.++++++|+|+     |+++++
T Consensus        23 i~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNI-----V~l~g~   97 (308)
T 4gt4_A           23 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV-----VCLLGV   97 (308)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTB-----CCEEEE
T ss_pred             CCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCC-----CCcceE
Confidence            33466899999999999999999864     35788999998743  3445789999999999999998     999999


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 024661          162 FDYRNHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENIL  226 (264)
Q Consensus       162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nil  226 (264)
                      +.+.+.+||||||| +|+|.++|....              ...+++..++.|+.||+.||+|||+++||||||||+|||
T Consensus        98 ~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NIL  177 (308)
T 4gt4_A           98 VTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVL  177 (308)
T ss_dssp             ECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             EEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceE
Confidence            99999999999999 999999997532              135899999999999999999999999999999999999


Q ss_pred             eecCCcEEeccCCCCCcCC--------CCcccceeeeeceeEe
Q 024661          227 LVSAEYVKVPDYKVPSPRH--------AFSFQTFLSMASRVYI  261 (264)
Q Consensus       227 i~~~~~v~l~Dfg~a~~~~--------~~~~~~~~y~ape~~~  261 (264)
                      +++++++||+|||+|+...        ....+|..|||||++.
T Consensus       178 l~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~  220 (308)
T 4gt4_A          178 VYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM  220 (308)
T ss_dssp             ECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHH
T ss_pred             ECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHh
Confidence            9999999999999997532        2335788999999864

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=2.4e-40  Score=296.72  Aligned_cols=163  Identities=22%  Similarity=0.279  Sum_probs=141.9

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHH---HhccCCCCcceEEEceeeee
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQR---LARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~---l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ++|++++.||+|+||+||+|+++.+|+.||+|++++..    .......+|..+++.   +.||||     ++++++|++
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~I-----V~l~~~f~~  263 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI-----VCMSYAFHT  263 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTB-----CCEEEEEEC
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCE-----eEEEEEEEE
Confidence            67999999999999999999999999999999997542    223344455444444   455555     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      .+.+||||||+ ||+|.+++.+..  .+++..++.|+.||+.||+|||++|||||||||+||||+.+|++||+|||+|+.
T Consensus       264 ~~~lylVmEy~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~  341 (689)
T 3v5w_A          264 PDKLSFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACD  341 (689)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             CCEEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeee
Confidence            99999999999 999999999875  799999999999999999999999999999999999999999999999999976


Q ss_pred             CCC----CcccceeeeeceeEe
Q 024661          244 RHA----FSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~----~~~~~~~y~ape~~~  261 (264)
                      ...    ..+||+.|||||++.
T Consensus       342 ~~~~~~~t~~GTp~YmAPEvl~  363 (689)
T 3v5w_A          342 FSKKKPHASVGTHGYMAPEVLQ  363 (689)
T ss_dssp             CSSCCCCSCCSCGGGCCHHHHS
T ss_pred             cCCCCCCCccCCcCccCHHHHh
Confidence            432    457999999999874

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=2.1e-40  Score=275.55  Aligned_cols=160  Identities=23%  Similarity=0.233  Sum_probs=135.4

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC----E
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN----H  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~----~  167 (264)
                      .+|.+.++||+|+||+||+|++  +|+.||||+++...........|+..+..++|+|+     +++++++.+++    .
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNI-----v~l~g~~~~~~~~~~~   75 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI-----LGFIAADNKDNGTWTQ   75 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTB-----CCEEEEEEEECSSSEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCC-----CcEEEEEEecCCCceE
Confidence            5699999999999999999987  48899999998655444444456666667788877     99999987653    6


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeecCCCCCCEEeecCCcEEeccC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL--------RLIHTDLKPENILLVSAEYVKVPDY  238 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~ivH~dikp~Nili~~~~~v~l~Df  238 (264)
                      +||||||+ +|+|.+++...   .++++.+..++.|++.||+|||++        +|+||||||+|||++.++++||+||
T Consensus        76 ~~lV~Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DF  152 (303)
T 3hmm_A           76 LWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL  152 (303)
T ss_dssp             EEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred             EEEEecCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeC
Confidence            89999999 99999999875   599999999999999999999987        9999999999999999999999999


Q ss_pred             CCCCcCCC----------CcccceeeeeceeEe
Q 024661          239 KVPSPRHA----------FSFQTFLSMASRVYI  261 (264)
Q Consensus       239 g~a~~~~~----------~~~~~~~y~ape~~~  261 (264)
                      |+|+....          ...||+.|||||++.
T Consensus       153 Gla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~  185 (303)
T 3hmm_A          153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD  185 (303)
T ss_dssp             TTCEEEETTTTEESCC-----CCGGGCCHHHHT
T ss_pred             CCCccccCCCCceeeecccccccccccCHHHhc
Confidence            99975322          235899999999874

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=9.5e-40  Score=277.44  Aligned_cols=163  Identities=23%  Similarity=0.333  Sum_probs=142.0

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeC---CCCcEEEEEEEechhhhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeee
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~  164 (264)
                      .+.++|++.++||+|+||+||+|+++   .+++.||+|.+.+.. ....+.+|+++++.+ .|+|+     ++++++|.+
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nI-----v~l~~~~~~   91 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNV-----MGVKYCFRK   91 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTB-----CCCSEEEEE
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCC-----ceEEEEEEE
Confidence            46688999999999999999999874   467899999887543 345678899999998 47777     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC-CcEEeccCCCCC
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA-EYVKVPDYKVPS  242 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~-~~v~l~Dfg~a~  242 (264)
                      .+++|+||||+ +++|.+++.     .+++..++.++.||+.||+|||++||+||||||+|||++.+ +.+||+|||+|+
T Consensus        92 ~~~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~  166 (361)
T 4f9c_A           92 NDHVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ  166 (361)
T ss_dssp             TTEEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             CCEEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCc
Confidence            99999999999 899999983     48999999999999999999999999999999999999987 899999999996


Q ss_pred             cCCC----------------------------------CcccceeeeeceeEee
Q 024661          243 PRHA----------------------------------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       243 ~~~~----------------------------------~~~~~~~y~ape~~~~  262 (264)
                      ....                                  ..+||+.|||||++.+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~  220 (361)
T 4f9c_A          167 GTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTK  220 (361)
T ss_dssp             ECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTT
T ss_pred             ccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcC
Confidence            4322                                  2258999999998754

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=4.7e-39  Score=288.33  Aligned_cols=168  Identities=24%  Similarity=0.359  Sum_probs=150.0

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      .+.++|++++.||+|+||.||+|.++.+|+.||+|++... ....+.+.+|+.+|+.++|+|+     ++++++|.+.+.
T Consensus       154 ~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnI-----v~l~~~~~~~~~  228 (573)
T 3uto_A          154 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL-----VNLHDAFEDDNE  228 (573)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTB-----CCEEEEEECSSE
T ss_pred             cCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCC-----CeEEEEEEECCE
Confidence            3457899999999999999999999999999999998754 3446778899999999999988     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC--CcEEeccCCCCCcC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA--EYVKVPDYKVPSPR  244 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~--~~v~l~Dfg~a~~~  244 (264)
                      +||||||| ||+|.+++.... ..+++..+..|+.||+.||+|||++||+||||||+|||++.+  +.+||+|||+|+..
T Consensus       229 ~~iv~E~~~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~  307 (573)
T 3uto_A          229 MVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL  307 (573)
T ss_dssp             EEEEEECCCCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEEC
T ss_pred             EEEEEeecCCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEc
Confidence            99999999 999999997543 369999999999999999999999999999999999999865  89999999999875


Q ss_pred             CCC-----cccceeeeeceeEee
Q 024661          245 HAF-----SFQTFLSMASRVYIC  262 (264)
Q Consensus       245 ~~~-----~~~~~~y~ape~~~~  262 (264)
                      ...     .+||+.|||||++.+
T Consensus       308 ~~~~~~~~~~GT~~y~APEv~~~  330 (573)
T 3uto_A          308 DPKQSVKVTTGTAEFAAPEVAEG  330 (573)
T ss_dssp             CTTSEEEEECSSGGGCCHHHHTT
T ss_pred             cCCCceeeeEECccccCHHHhCC
Confidence            442     368999999998753

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=3.8e-39  Score=272.36  Aligned_cols=166  Identities=21%  Similarity=0.275  Sum_probs=141.9

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCC-----CcEEEEEEEech--hhhHHHHHHHHHHHHHHhc-cCCCCcceEEEceee
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSI--NKYREAAMIEIDVLQRLAR-HDIGGTRCVQIRNWF  162 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~-~~~~~~~~~~~~~~~  162 (264)
                      .++|+++++||+|+||+||+|.+..+     ++.||+|.++..  ....+.+.+|+.+++++.| +|+     |++++++
T Consensus        63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnI-----V~l~g~~  137 (353)
T 4ase_A           63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV-----VNLLGAC  137 (353)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEE
T ss_pred             HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcE-----EEEEEEE
Confidence            46899999999999999999997654     367999998753  3445678999999999987 466     9999988


Q ss_pred             ee-CCEEEEEEecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 024661          163 DY-RNHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENIL  226 (264)
Q Consensus       163 ~~-~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nil  226 (264)
                      .. .+.+||||||| +|+|.++|+...              ...+++..+..|+.||+.||+|||+++||||||||+|||
T Consensus       138 ~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NIL  217 (353)
T 4ase_A          138 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL  217 (353)
T ss_dssp             CCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             EecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCcccee
Confidence            66 46799999999 999999998532              235899999999999999999999999999999999999


Q ss_pred             eecCCcEEeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          227 LVSAEYVKVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       227 i~~~~~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      ++.++.+||+|||+|+....        ...+|..|||||++.
T Consensus       218 l~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~  260 (353)
T 4ase_A          218 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF  260 (353)
T ss_dssp             ECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHH
T ss_pred             eCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHh
Confidence            99999999999999986432        224677899999864

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=7.1e-37  Score=260.37  Aligned_cols=189  Identities=34%  Similarity=0.622  Sum_probs=166.0

Q ss_pred             CCCCCCCceEEeeCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCc
Q 024661           74 RPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT  153 (264)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~  153 (264)
                      ...+....+.+..+..+.++|++.++||+|+||.||+|.+..+++.||+|+++...........|+.+++.+.+..+.|+
T Consensus        17 ~~~~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~   96 (360)
T 3llt_A           17 QGDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNN   96 (360)
T ss_dssp             ---CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGG
T ss_pred             ecCccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCC
Confidence            34444556678888999999999999999999999999999999999999998766777788889999999997766777


Q ss_pred             ceEEEceeeeeCCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec----
Q 024661          154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS----  229 (264)
Q Consensus       154 ~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~----  229 (264)
                      +++++++++...+..|+|||+++++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.    
T Consensus        97 ~iv~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~  176 (360)
T 3llt_A           97 NIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFE  176 (360)
T ss_dssp             GBCCEEEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCC
T ss_pred             CeecccceeeECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEcccccc
Confidence            8899999999999999999999999999999876567999999999999999999999999999999999999975    


Q ss_pred             ---------------------CCcEEeccCCCCCcCCC---CcccceeeeeceeEee
Q 024661          230 ---------------------AEYVKVPDYKVPSPRHA---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       230 ---------------------~~~v~l~Dfg~a~~~~~---~~~~~~~y~ape~~~~  262 (264)
                                           ++.+||+|||++.....   ...+|..|+|||++.+
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~  233 (360)
T 3llt_A          177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILN  233 (360)
T ss_dssp             EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTT
T ss_pred             ccccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcC
Confidence                                 78999999999975433   4458899999998653

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=6.7e-36  Score=251.36  Aligned_cols=166  Identities=22%  Similarity=0.349  Sum_probs=149.2

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      ..++|++.+.||+|+||.||+|.+..+|+.||+|++.+.   ....+.+.+|+.+++.++|+|+     +++++++.+.+
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI-----v~l~~~~~~~~   87 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI-----VKLFEVIETEK   87 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEEECSS
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEEECC
Confidence            346799999999999999999999999999999999753   2445678899999999999888     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      .+|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||++....
T Consensus        88 ~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  165 (328)
T 3fe3_A           88 TLYLIMEYASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT  165 (328)
T ss_dssp             EEEEEECCCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred             EEEEEEECCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence            999999999 899999998765  79999999999999999999999999999999999999999999999999997543


Q ss_pred             C-----CcccceeeeeceeEee
Q 024661          246 A-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~-----~~~~~~~y~ape~~~~  262 (264)
                      .     ..++|..|+|||++.+
T Consensus       166 ~~~~~~~~~gt~~y~aPE~~~~  187 (328)
T 3fe3_A          166 VGGKLDAFCGAPPYAAPELFQG  187 (328)
T ss_dssp             SSCGGGTTSSSGGGCCHHHHHT
T ss_pred             CCCccccccCCcceeCcccccC
Confidence            2     3468899999998653

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=5.7e-36  Score=252.61  Aligned_cols=164  Identities=22%  Similarity=0.336  Sum_probs=147.2

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++++.||+|+||.||+|+++.+|+.||+|++++..    .....+.+|+.+++.+.|+++     +++++++.+.+.
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~l~~~~~~~~~   79 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL-----TALKYAFQTHDR   79 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTB-----CCEEEEEECSSE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcC-----cceEEEEEeCCE
Confidence            57999999999999999999999999999999998542    345678889999999888877     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC-
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH-  245 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~-  245 (264)
                      +|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||++.... 
T Consensus        80 ~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  157 (337)
T 1o6l_A           80 LCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS  157 (337)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred             EEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence            99999999 899999998765  79999999999999999999999999999999999999999999999999997532 


Q ss_pred             -----CCcccceeeeeceeEee
Q 024661          246 -----AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 -----~~~~~~~~y~ape~~~~  262 (264)
                           ...+||..|||||++.+
T Consensus       158 ~~~~~~~~~gt~~y~aPE~~~~  179 (337)
T 1o6l_A          158 DGATMKTFCGTPEYLAPEVLED  179 (337)
T ss_dssp             TTCCBCCCEECGGGCCGGGGSS
T ss_pred             CCCcccccccChhhCChhhhcC
Confidence                 23458899999998653

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=6.4e-36  Score=253.81  Aligned_cols=164  Identities=22%  Similarity=0.306  Sum_probs=144.4

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeC
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .++|++.+.||+|+||.||+|+++.+++.||+|++++..    ...+.+.+|..+++.+ .|+++     +++++++.+.
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~I-----v~l~~~~~~~   96 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFL-----TQLFCCFQTP   96 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTB-----CCEEEEEECS
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCce-----eeEEEEEEeC
Confidence            367999999999999999999999999999999998532    3446678899999987 57776     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      +.+|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+|...
T Consensus        97 ~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~  174 (353)
T 3txo_A           97 DRLFFVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG  174 (353)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeec
Confidence            9999999999 899999998765  7999999999999999999999999999999999999999999999999999753


Q ss_pred             C------CCcccceeeeeceeEe
Q 024661          245 H------AFSFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~------~~~~~~~~y~ape~~~  261 (264)
                      .      ...+||..|||||++.
T Consensus       175 ~~~~~~~~~~~gt~~y~aPE~~~  197 (353)
T 3txo_A          175 ICNGVTTATFCGTPDYIAPEILQ  197 (353)
T ss_dssp             CC---------CCGGGCCHHHHH
T ss_pred             ccCCccccccCCCcCeEChhhcC
Confidence            2      2345899999999864

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=1.4e-35  Score=250.84  Aligned_cols=166  Identities=20%  Similarity=0.278  Sum_probs=147.0

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeee
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~  164 (264)
                      ..++|++.+.||+|+||.||+|+++.+++.||+|++++..    ...+.+..|..+++.+ .|+++     +++++++.+
T Consensus        15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~i-----v~l~~~~~~   89 (345)
T 1xjd_A           15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL-----THMFCTFQT   89 (345)
T ss_dssp             -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTB-----CCEEEEEEC
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCC-----CcEEEEEEe
Confidence            3467999999999999999999999999999999998642    3446678899999887 77777     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      .+.+|+||||+ +|+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||++..
T Consensus        90 ~~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~  167 (345)
T 1xjd_A           90 KENLFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKE  167 (345)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence            99999999999 999999998765  799999999999999999999999999999999999999999999999999975


Q ss_pred             CC------CCcccceeeeeceeEee
Q 024661          244 RH------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       244 ~~------~~~~~~~~y~ape~~~~  262 (264)
                      ..      ...+||..|+|||++.+
T Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~  192 (345)
T 1xjd_A          168 NMLGDAKTNTFCGTPDYIAPEILLG  192 (345)
T ss_dssp             CCCTTCCBCCCCSCGGGCCHHHHTT
T ss_pred             cccCCCcccCCCCCcccCChhhhcC
Confidence            32      23468999999998643

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=9.5e-36  Score=246.80  Aligned_cols=170  Identities=23%  Similarity=0.388  Sum_probs=149.9

Q ss_pred             eCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEec----hhhhHHHHHHHHHHHHHHhccCCCCcceEEEcee
Q 024661           86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNW  161 (264)
Q Consensus        86 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~  161 (264)
                      +++.+.++|++.+.||+|+||.||+|.+..+++.||+|++..    .....+.+.+|+.+++.++|+|+     ++++++
T Consensus         5 ~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i-----v~~~~~   79 (294)
T 4eqm_A            5 IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNI-----VSMIDV   79 (294)
T ss_dssp             CSSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTB-----CCEEEE
T ss_pred             hhhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCC-----ceEEEe
Confidence            567788999999999999999999999999999999999853    23445678899999999999888     999999


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCC
Q 024661          162 FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV  240 (264)
Q Consensus       162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~  240 (264)
                      +.+.+.+|+||||+ +++|.+++....  .+++..++.++.|++.||.|||++||+||||||+|||++.++++||+|||+
T Consensus        80 ~~~~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~  157 (294)
T 4eqm_A           80 DEEDDCYYLVMEYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGI  157 (294)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSS
T ss_pred             eeeCCeEEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCC
Confidence            99999999999999 889999998775  799999999999999999999999999999999999999999999999999


Q ss_pred             CCcCCC-------CcccceeeeeceeEee
Q 024661          241 PSPRHA-------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       241 a~~~~~-------~~~~~~~y~ape~~~~  262 (264)
                      +.....       ...+|..|+|||++.+
T Consensus       158 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  186 (294)
T 4eqm_A          158 AKALSETSLTQTNHVLGTVQYFSPEQAKG  186 (294)
T ss_dssp             STTC-------------CCSSCCHHHHHT
T ss_pred             ccccccccccccCccccCccccCHhHhcC
Confidence            976432       2347889999997643

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=1.6e-35  Score=254.49  Aligned_cols=165  Identities=19%  Similarity=0.289  Sum_probs=145.9

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeC
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .++|++++.||+|+||+||+|+++.+++.||+|++++..    ...+.+.+|..+++.+ .|+++     ++++++|.+.
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~I-----v~l~~~~~~~  125 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL-----VGLHSCFQTE  125 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTB-----CCEEEEEECS
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCc-----CeeEEEEEEC
Confidence            367999999999999999999999999999999998543    2334577899999887 67777     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      +.+|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+|+..
T Consensus       126 ~~~~lV~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~  203 (396)
T 4dc2_A          126 SRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  203 (396)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             CEEEEEEEcCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence            9999999999 899999998765  7999999999999999999999999999999999999999999999999999752


Q ss_pred             ------CCCcccceeeeeceeEee
Q 024661          245 ------HAFSFQTFLSMASRVYIC  262 (264)
Q Consensus       245 ------~~~~~~~~~y~ape~~~~  262 (264)
                            ....+||..|||||++.+
T Consensus       204 ~~~~~~~~~~~gt~~Y~aPE~l~~  227 (396)
T 4dc2_A          204 LRPGDTTSTFCGTPNYIAPEILRG  227 (396)
T ss_dssp             CCTTCCBCCCCBCGGGCCHHHHTT
T ss_pred             ccCCCccccccCCcccCCchhhcC
Confidence                  223468999999998653

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.2e-35  Score=247.55  Aligned_cols=167  Identities=20%  Similarity=0.359  Sum_probs=150.2

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      .+.++|++.+.||+|+||.||+|.+..+++.+|+|++.........+.+|+.+++.++|+|+     +++++++.+.+.+
T Consensus         2 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnI-----v~~~~~~~~~~~~   76 (321)
T 1tki_A            2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNI-----LHLHESFESMEEL   76 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTB-----CCEEEEEEETTEE
T ss_pred             chhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCC-----CeEeEEEecCCEE
Confidence            35688999999999999999999999999999999998666666788999999999999888     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec--CCcEEeccCCCCCcCC
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS--AEYVKVPDYKVPSPRH  245 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~--~~~v~l~Dfg~a~~~~  245 (264)
                      |+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.  ++.+||+|||++....
T Consensus        77 ~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~  155 (321)
T 1tki_A           77 VMIFEFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK  155 (321)
T ss_dssp             EEEECCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred             EEEEEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECC
Confidence            9999999 889999997643 46999999999999999999999999999999999999997  7899999999997654


Q ss_pred             CC-----cccceeeeeceeEe
Q 024661          246 AF-----SFQTFLSMASRVYI  261 (264)
Q Consensus       246 ~~-----~~~~~~y~ape~~~  261 (264)
                      ..     ..+|+.|+|||++.
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~  176 (321)
T 1tki_A          156 PGDNFRLLFTAPEYYAPEVHQ  176 (321)
T ss_dssp             TTCEEEEEESCGGGSCHHHHT
T ss_pred             CCCccccccCChhhcCcHHhc
Confidence            32     24788899999764

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=1.4e-35  Score=257.90  Aligned_cols=167  Identities=21%  Similarity=0.300  Sum_probs=147.6

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh----hHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ...++|++.++||+|+||+||+|+++.+++.||+|++++...    ....+.+|+.+++.+.|+++     +++++++.+
T Consensus        71 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~I-----v~l~~~~~~  145 (437)
T 4aw2_A           71 LHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWI-----TTLHYAFQD  145 (437)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTB-----CCEEEEEEC
T ss_pred             CChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCE-----EEEEEEEee
Confidence            334789999999999999999999999999999999975332    22347889999999988887     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      .+.+|+||||+ +|+|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+.
T Consensus       146 ~~~~~lV~Ey~~gg~L~~~l~~~~-~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~  224 (437)
T 4aw2_A          146 DNNLYLVMDYYVGGDLLTLLSKFE-DRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLK  224 (437)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             CCEEEEEEecCCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhh
Confidence            99999999999 999999998743 3699999999999999999999999999999999999999999999999999965


Q ss_pred             CCC-------CcccceeeeeceeEe
Q 024661          244 RHA-------FSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~-------~~~~~~~y~ape~~~  261 (264)
                      ...       ..+||..|||||++.
T Consensus       225 ~~~~~~~~~~~~~GT~~Y~APE~l~  249 (437)
T 4aw2_A          225 LMEDGTVQSSVAVGTPDYISPEILQ  249 (437)
T ss_dssp             CCTTSCEECCSCCSCGGGCCHHHHH
T ss_pred             cccCCCcccccccCCcCeeChHHHh
Confidence            322       246899999999875

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=1.2e-35  Score=256.55  Aligned_cols=164  Identities=20%  Similarity=0.299  Sum_probs=146.7

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh----hHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      ..++|++.+.||+|+||.||+|+++.+++.||+|++++...    ....+.+|+.+++.++|+++     +++++++.+.
T Consensus        67 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~I-----v~l~~~~~~~  141 (410)
T 3v8s_A           67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWV-----VQLFYAFQDD  141 (410)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTB-----CCEEEEEECS
T ss_pred             CccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEEEC
Confidence            34679999999999999999999999999999999975332    23457789999999998887     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      ..+|+||||+ +|+|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+|...
T Consensus       142 ~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~  218 (410)
T 3v8s_A          142 RYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM  218 (410)
T ss_dssp             SEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             CEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEee
Confidence            9999999999 99999999864   5999999999999999999999999999999999999999999999999999654


Q ss_pred             CC-------CcccceeeeeceeEe
Q 024661          245 HA-------FSFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~~-------~~~~~~~y~ape~~~  261 (264)
                      ..       ..+||..|||||++.
T Consensus       219 ~~~~~~~~~~~~gt~~Y~APE~l~  242 (410)
T 3v8s_A          219 NKEGMVRCDTAVGTPDYISPEVLK  242 (410)
T ss_dssp             CTTSEEECCSCCSCGGGCCHHHHH
T ss_pred             ccCCcccccCCcCCccccCHHHhh
Confidence            32       446899999999864

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=9.2e-36  Score=261.41  Aligned_cols=149  Identities=26%  Similarity=0.408  Sum_probs=125.7

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee-
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-  164 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~-  164 (264)
                      .+.++|++++.||+|+||+||+|.+..+++.||||++.+.   ....+.+.+|+.+++.++|+|+     +++++++.. 
T Consensus        50 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~l~~~~~~~  124 (458)
T 3rp9_A           50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV-----VKVLDIVIPK  124 (458)
T ss_dssp             CSCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTB-----CCEEEECCCS
T ss_pred             ccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCC-----CceEEEEecC
Confidence            4568899999999999999999999999999999998642   3445678899999999999888     999998843 


Q ss_pred             ----CCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCC
Q 024661          165 ----RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV  240 (264)
Q Consensus       165 ----~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~  240 (264)
                          ...+|+|||+++++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus       125 ~~~~~~~~~lv~e~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGl  202 (458)
T 3rp9_A          125 DVEKFDELYVVLEIADSDFKKLFRTPV--YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGL  202 (458)
T ss_dssp             CTTTCCCEEEEECCCSEEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred             CcccCceEEEEEeccccchhhhcccCC--CCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeeccccc
Confidence                36799999999999999998764  799999999999999999999999999999999999999999999999999


Q ss_pred             CCcC
Q 024661          241 PSPR  244 (264)
Q Consensus       241 a~~~  244 (264)
                      |+..
T Consensus       203 a~~~  206 (458)
T 3rp9_A          203 ARTV  206 (458)
T ss_dssp             CBCT
T ss_pred             chhc
Confidence            9764

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.5e-35  Score=256.08  Aligned_cols=167  Identities=23%  Similarity=0.310  Sum_probs=148.0

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ...++|++.+.||+|+||.||+|+++.+++.||+|++++..    ...+.+.+|..++..+.|+++     +++++++.+
T Consensus        58 ~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~I-----v~l~~~~~~  132 (412)
T 2vd5_A           58 LQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWI-----TQLHFAFQD  132 (412)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTB-----CCEEEEEEC
T ss_pred             CChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCe-----eeEEEEEee
Confidence            34478999999999999999999999999999999997532    233457889999999988887     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      .+.+|+||||+ +|+|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||++..
T Consensus       133 ~~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~  211 (412)
T 2vd5_A          133 ENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLK  211 (412)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhhee
Confidence            99999999999 999999998753 3699999999999999999999999999999999999999999999999999975


Q ss_pred             CCC-------CcccceeeeeceeEe
Q 024661          244 RHA-------FSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~-------~~~~~~~y~ape~~~  261 (264)
                      ...       ..+||..|||||++.
T Consensus       212 ~~~~~~~~~~~~~Gt~~Y~APE~l~  236 (412)
T 2vd5_A          212 LRADGTVRSLVAVGTPDYLSPEILQ  236 (412)
T ss_dssp             CCTTSCEECSSCCSCGGGCCHHHHH
T ss_pred             ccCCCccccceeccccCcCCHHHHh
Confidence            432       236899999999875

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=3.4e-35  Score=248.72  Aligned_cols=165  Identities=19%  Similarity=0.287  Sum_probs=146.7

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeC
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .++|++.+.||+|+||.||+|+++.+++.||+|++++..    ...+.+.+|..+++.+ .|+++     +++++++.+.
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~i-----v~l~~~~~~~   82 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFL-----VGLHSCFQTE   82 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTB-----CCEEEEEECS
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCcc-----CeEEEEEEeC
Confidence            367999999999999999999999999999999998542    3456678899999887 67777     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      +.+|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+++..
T Consensus        83 ~~~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~  160 (345)
T 3a8x_A           83 SRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  160 (345)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccc
Confidence            9999999999 899999998765  7999999999999999999999999999999999999999999999999999752


Q ss_pred             C------CCcccceeeeeceeEee
Q 024661          245 H------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       245 ~------~~~~~~~~y~ape~~~~  262 (264)
                      .      ...++|..|+|||++.+
T Consensus       161 ~~~~~~~~~~~gt~~y~aPE~~~~  184 (345)
T 3a8x_A          161 LRPGDTTSTFCGTPNYIAPEILRG  184 (345)
T ss_dssp             CCTTCCBCCCCSCGGGCCHHHHTT
T ss_pred             cCCCCcccccCCCccccCccccCC
Confidence            1      23368999999998643

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=2.2e-35  Score=252.83  Aligned_cols=166  Identities=24%  Similarity=0.384  Sum_probs=149.3

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ...++|++++.||+|+||.||+|.+..+++.||+|++.+..    .....+.+|+.+++.+.|+|+     ++++++|.+
T Consensus        12 v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~I-----v~l~~~~~~   86 (384)
T 4fr4_A           12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFL-----VNLWYSFQD   86 (384)
T ss_dssp             CCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTB-----CCEEEEEEC
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCC-----CcEEEEEEe
Confidence            34478999999999999999999999999999999997543    334678899999999998887     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      .+.+|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++..
T Consensus        87 ~~~~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~  164 (384)
T 4fr4_A           87 EEDMFMVVDLLLGGDLRYHLQQNV--HFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAM  164 (384)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             CCEEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeee
Confidence            99999999999 999999998765  799999999999999999999999999999999999999999999999999975


Q ss_pred             CC-----CCcccceeeeeceeEe
Q 024661          244 RH-----AFSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~-----~~~~~~~~y~ape~~~  261 (264)
                      ..     ....||..|||||++.
T Consensus       165 ~~~~~~~~~~~gt~~Y~aPE~~~  187 (384)
T 4fr4_A          165 LPRETQITTMAGTKPYMAPEMFS  187 (384)
T ss_dssp             CCTTCCBCCCCSCGGGCCGGGTC
T ss_pred             ccCCCceeccCCCccccCCeeec
Confidence            43     2346899999999875

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=1.6e-35  Score=248.02  Aligned_cols=163  Identities=24%  Similarity=0.349  Sum_probs=147.5

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++.+.||+|+||.||+|++..+|+.||+|++++..    ...+.+.+|+.+++.+.|+++     +++++++.+...
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~I-----v~~~~~~~~~~~   80 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFI-----IRMWGTFQDAQQ   80 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTB-----CCEEEEEECSSE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCC-----ceEeEEEEeCCE
Confidence            57999999999999999999999999999999998542    345677889999999988887     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      +|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus        81 ~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~  158 (318)
T 1fot_A           81 IFMIMDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD  158 (318)
T ss_dssp             EEEEECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred             EEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence            99999999 899999998765  799999999999999999999999999999999999999999999999999976443


Q ss_pred             ---CcccceeeeeceeEe
Q 024661          247 ---FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~  261 (264)
                         ..++|..|||||++.
T Consensus       159 ~~~~~~gt~~y~aPE~~~  176 (318)
T 1fot_A          159 VTYTLCGTPDYIAPEVVS  176 (318)
T ss_dssp             CBCCCCSCTTTCCHHHHT
T ss_pred             ccccccCCccccCHhHhc
Confidence               346899999999864

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.2e-35  Score=248.88  Aligned_cols=167  Identities=25%  Similarity=0.350  Sum_probs=149.5

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ...++|.+.+.||+|+||.||+|.+..+++.||+|++.+..    .....+.+|+.+++.++|+|+     +++++++.+
T Consensus         6 ~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI-----v~l~~~~~~   80 (336)
T 3h4j_B            6 RHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHI-----IKLYDVITT   80 (336)
T ss_dssp             SEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTB-----CCEEEEEEC
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCC-----CeEEEEEEe
Confidence            44578999999999999999999999999999999997532    224578899999999998887     999999999


Q ss_pred             CCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          165 RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       165 ~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      .+.+|+||||++|+|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus        81 ~~~~~lv~E~~~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~  158 (336)
T 3h4j_B           81 PTDIVMVIEYAGGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM  158 (336)
T ss_dssp             SSEEEEEECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTT
T ss_pred             CCEEEEEEECCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceec
Confidence            99999999999999999998765  7999999999999999999999999999999999999999999999999999764


Q ss_pred             CC-----CcccceeeeeceeEee
Q 024661          245 HA-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       245 ~~-----~~~~~~~y~ape~~~~  262 (264)
                      ..     ..++|..|+|||++.+
T Consensus       159 ~~~~~~~~~~gt~~y~aPE~~~~  181 (336)
T 3h4j_B          159 TDGNFLKTSCGSPNYAAPEVING  181 (336)
T ss_dssp             TTSBTTCCCTTSTTTSCGGGSCC
T ss_pred             cCCcccccccCCcCcCCHHHHcC
Confidence            32     3468899999998753

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=2.4e-35  Score=250.09  Aligned_cols=164  Identities=24%  Similarity=0.395  Sum_probs=148.1

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      .++|++.+.||+|+||.||+|++..+|+.||+|++.+..    ...+.+.+|+.+++.+.|+++     +++++++.+.+
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~~~  114 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL-----VKLEFSFKDNS  114 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTB-----CCEEEEEECSS
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEEcCC
Confidence            367999999999999999999999999999999997543    334677889999999988877     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      .+|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus       115 ~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~  192 (350)
T 1rdq_E          115 NLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK  192 (350)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred             EEEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceecc
Confidence            999999999 999999998765  79999999999999999999999999999999999999999999999999997644


Q ss_pred             C---CcccceeeeeceeEe
Q 024661          246 A---FSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ~---~~~~~~~y~ape~~~  261 (264)
                      .   ..++|..|+|||++.
T Consensus       193 ~~~~~~~gt~~y~aPE~~~  211 (350)
T 1rdq_E          193 GRTWTLCGTPEALAPEIIL  211 (350)
T ss_dssp             SCBCCCEECGGGCCHHHHT
T ss_pred             CCcccccCCccccCHHHhc
Confidence            3   346899999999864

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=2.9e-35  Score=250.43  Aligned_cols=167  Identities=24%  Similarity=0.452  Sum_probs=149.3

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh-------hHHHHHHHHHHHHHHhccCCCCcceEEEce
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~  160 (264)
                      ..+.++|++.+.||+|+||.||+|.+..+|+.||+|++++...       ..+.+.+|+.+++.+.|+|+     +++++
T Consensus         8 ~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnI-----v~l~~   82 (361)
T 2yab_A            8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI-----ITLHD   82 (361)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTB-----CCEEE
T ss_pred             CChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCC-----CcEEE
Confidence            4567889999999999999999999999999999999975332       34678899999999998887     99999


Q ss_pred             eeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC----cEEe
Q 024661          161 WFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE----YVKV  235 (264)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~----~v~l  235 (264)
                      ++.+.+.+|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++    .+||
T Consensus        83 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl  160 (361)
T 2yab_A           83 VYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKL  160 (361)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHTTCS--CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEE
T ss_pred             EEEeCCEEEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEE
Confidence            999999999999999 999999998754  799999999999999999999999999999999999998877    7999


Q ss_pred             ccCCCCCcCCC-----CcccceeeeeceeEe
Q 024661          236 PDYKVPSPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       236 ~Dfg~a~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      +|||++.....     ...||..|+|||++.
T Consensus       161 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~  191 (361)
T 2yab_A          161 IDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN  191 (361)
T ss_dssp             CCCSSCEECCTTCCCCCCCSCGGGCCHHHHT
T ss_pred             EecCCceEcCCCCccccCCCCccEECchHHc
Confidence            99999976432     345899999999864

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=2.8e-35  Score=249.86  Aligned_cols=165  Identities=21%  Similarity=0.273  Sum_probs=144.7

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeee
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~  164 (264)
                      ..++|++.+.||+|+||.||+|+++.+++.||+|++++..    ...+.+..|..+++.+ .|+++     +++++++.+
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~i-----v~l~~~~~~   92 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFL-----TQLHSCFQT   92 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTB-----CCEEEEEEC
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEE-----eeEEEEEEc
Confidence            3467999999999999999999999999999999998542    3345677888888776 45555     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      .+.+|+||||+ +|+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||++..
T Consensus        93 ~~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~  170 (353)
T 2i0e_A           93 MDRLYFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE  170 (353)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence            99999999999 899999998765  799999999999999999999999999999999999999999999999999975


Q ss_pred             CC------CCcccceeeeeceeEe
Q 024661          244 RH------AFSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~------~~~~~~~~y~ape~~~  261 (264)
                      ..      ...+||..|||||++.
T Consensus       171 ~~~~~~~~~~~~gt~~y~aPE~~~  194 (353)
T 2i0e_A          171 NIWDGVTTKTFCGTPDYIAPEIIA  194 (353)
T ss_dssp             CCCTTCCBCCCCSCGGGCCHHHHT
T ss_pred             cccCCcccccccCCccccChhhhc
Confidence            22      2346899999999864

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=3.4e-35  Score=250.28  Aligned_cols=167  Identities=28%  Similarity=0.363  Sum_probs=144.8

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ...++|++.+.||+|+||.||+|.+..+++.||+|++.......+.+.+|+.+++.++|+|+     +++++++.+.+.+
T Consensus        17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~~~~~~~~~~   91 (361)
T 3uc3_A           17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNI-----VRFKEVILTPTHL   91 (361)
T ss_dssp             CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTB-----CCEEEEEECSSEE
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCC-----CcEEEEEeeCCEE
Confidence            34578999999999999999999999999999999998766666788999999999999888     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCc--EEeccCCCCCcCC
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY--VKVPDYKVPSPRH  245 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~--v~l~Dfg~a~~~~  245 (264)
                      |+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.  +||+|||+++...
T Consensus        92 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~  169 (361)
T 3uc3_A           92 AIIMEYASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV  169 (361)
T ss_dssp             EEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC----
T ss_pred             EEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCcccccc
Confidence            9999999 999999998765  7999999999999999999999999999999999999987765  9999999987422


Q ss_pred             -----CCcccceeeeeceeEee
Q 024661          246 -----AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 -----~~~~~~~~y~ape~~~~  262 (264)
                           ....+|..|+|||++.+
T Consensus       170 ~~~~~~~~~gt~~y~aPE~~~~  191 (361)
T 3uc3_A          170 LHSQPKSTVGTPAYIAPEVLLR  191 (361)
T ss_dssp             -----------CTTSCHHHHHC
T ss_pred             ccCCCCCCcCCCCcCChhhhcC
Confidence                 23468999999998643

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=2.2e-35  Score=254.69  Aligned_cols=163  Identities=24%  Similarity=0.405  Sum_probs=133.9

Q ss_pred             CCCeEEE-eecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeee----
Q 024661           91 TPRYRIL-SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDY----  164 (264)
Q Consensus        91 ~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~----  164 (264)
                      .++|.+. +.||+|+||+||+|.+..+++.||+|+++..    ..+.+|+.++.++ +|+|+     +++++++..    
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~E~~~~~~~~~hp~i-----v~l~~~~~~~~~~  130 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHI-----VRIVDVYENLYAG  130 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTB-----CCEEEEEEEEETT
T ss_pred             cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc----hhHHHHHHHHHHhcCCCCc-----ceEeEEEeecccC
Confidence            3557776 7899999999999999999999999999753    3456788877554 56666     888888876    


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec---CCcEEeccCCC
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS---AEYVKVPDYKV  240 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~---~~~v~l~Dfg~  240 (264)
                      ...+|+||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|||+
T Consensus       131 ~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~  210 (400)
T 1nxk_A          131 RKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF  210 (400)
T ss_dssp             EEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred             CcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEeccc
Confidence            67899999999 889999998765456999999999999999999999999999999999999998   78999999999


Q ss_pred             CCcCCC-----CcccceeeeeceeEee
Q 024661          241 PSPRHA-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       241 a~~~~~-----~~~~~~~y~ape~~~~  262 (264)
                      +.....     ..++|..|||||++.+
T Consensus       211 a~~~~~~~~~~~~~gt~~y~aPE~~~~  237 (400)
T 1nxk_A          211 AKETTSHNSLTTPCYTPYYVAPEVLGP  237 (400)
T ss_dssp             CEECC-----------CTTCCGGGSCC
T ss_pred             ccccCCCCccccCCCCCCccCHhhcCC
Confidence            976432     3457889999998743

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=9.4e-35  Score=252.87  Aligned_cols=179  Identities=34%  Similarity=0.615  Sum_probs=158.9

Q ss_pred             EeeCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccC-CCCcceEEEceee
Q 024661           84 FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHD-IGGTRCVQIRNWF  162 (264)
Q Consensus        84 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~-~~~~~~~~~~~~~  162 (264)
                      ....+.+..+|++.+.||+|+||.||+|.+..+++.||+|+++........+.+|+.+++.+.+.. ..+++++.+++.+
T Consensus        89 ~~~~~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~  168 (429)
T 3kvw_A           89 QVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENF  168 (429)
T ss_dssp             CCTTCEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEE
T ss_pred             ccCCCcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeec
Confidence            345567788999999999999999999999999999999999877777788899999999998764 3456789999999


Q ss_pred             eeCCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCc--EEeccCCC
Q 024661          163 DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY--VKVPDYKV  240 (264)
Q Consensus       163 ~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~--v~l~Dfg~  240 (264)
                      ...+.+|+|||+++++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.  +||+|||+
T Consensus       169 ~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~  248 (429)
T 3kvw_A          169 TFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGS  248 (429)
T ss_dssp             EETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred             ccCCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeeccc
Confidence            9999999999999889999999876567999999999999999999999999999999999999999987  99999999


Q ss_pred             CCcCCC---CcccceeeeeceeEee
Q 024661          241 PSPRHA---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       241 a~~~~~---~~~~~~~y~ape~~~~  262 (264)
                      +.....   ...+|..|||||++.+
T Consensus       249 a~~~~~~~~~~~gt~~y~aPE~~~~  273 (429)
T 3kvw_A          249 SCYEHQRVYTYIQSRFYRAPEVILG  273 (429)
T ss_dssp             CEETTCCCCSSCSCGGGCCHHHHHT
T ss_pred             ceecCCcccccCCCCCccChHHHhC
Confidence            965433   3458899999998653

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=1.4e-34  Score=241.08  Aligned_cols=171  Identities=29%  Similarity=0.476  Sum_probs=142.6

Q ss_pred             eCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh------hhHHHHHHHHHHHHHHh---ccCCCCcceE
Q 024661           86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------KYREAAMIEIDVLQRLA---RHDIGGTRCV  156 (264)
Q Consensus        86 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~e~~~l~~l~---~~~~~~~~~~  156 (264)
                      +++.+.++|++.+.||+|+||.||+|.+..+++.||+|++....      .......+|+.+++.+.   |+|+     +
T Consensus         3 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni-----v   77 (308)
T 3g33_A            3 LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV-----V   77 (308)
T ss_dssp             -------CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTB-----C
T ss_pred             CCcccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCe-----E
Confidence            35667789999999999999999999999999999999987322      22346677888888776   7777     9


Q ss_pred             EEceeeeeCC-----EEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC
Q 024661          157 QIRNWFDYRN-----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (264)
Q Consensus       157 ~~~~~~~~~~-----~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~  231 (264)
                      ++++++....     .+++|||+++++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus        78 ~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~  157 (308)
T 3g33_A           78 RLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG  157 (308)
T ss_dssp             CEEEEEEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTS
T ss_pred             EeeeeeeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC
Confidence            9999987754     68999999988999999987655699999999999999999999999999999999999999999


Q ss_pred             cEEeccCCCCCcCCC-----CcccceeeeeceeEe
Q 024661          232 YVKVPDYKVPSPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       232 ~v~l~Dfg~a~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      .+||+|||++.....     ...+|..|+|||++.
T Consensus       158 ~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~  192 (308)
T 3g33_A          158 TVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLL  192 (308)
T ss_dssp             CEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHH
T ss_pred             CEEEeeCccccccCCCcccCCccccccccCchHHc
Confidence            999999999976432     235788999999864

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=4.2e-35  Score=243.26  Aligned_cols=164  Identities=26%  Similarity=0.345  Sum_probs=147.2

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+.+++.+.|+|+     +++++++.+.+.+
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~~~~~   92 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI-----VNYLDSYLVGDEL   92 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTB-----CCEEEEEEETTEE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCC-----CeEeEEEEECCEE
Confidence            4568999999999999999999999999999999987433 345678899999999999888     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-  246 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-  246 (264)
                      |+||||+ +++|.+++...   .+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++..... 
T Consensus        93 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  169 (297)
T 3fxz_A           93 WVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE  169 (297)
T ss_dssp             EEEEECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred             EEEEECCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence            9999999 99999999875   599999999999999999999999999999999999999999999999999865332 


Q ss_pred             -----CcccceeeeeceeEe
Q 024661          247 -----FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 -----~~~~~~~y~ape~~~  261 (264)
                           ...+|..|+|||++.
T Consensus       170 ~~~~~~~~gt~~y~aPE~~~  189 (297)
T 3fxz_A          170 QSKRSTMVGTPYWMAPEVVT  189 (297)
T ss_dssp             TCCBCCCCSCGGGCCHHHHH
T ss_pred             ccccCCccCCcCccChhhhc
Confidence                 335888999999864

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=5.4e-35  Score=241.87  Aligned_cols=164  Identities=26%  Similarity=0.439  Sum_probs=145.6

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++...   ......+.+|+.+++.++|+|+     +++++++.+++.+
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~   76 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI-----VRLHDVLHSDKKL   76 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTB-----CCEEEEEEETTEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCE-----eeEEeEEEeCCEE
Confidence            5799999999999999999999999999999999743   2345678899999999998887     9999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC---
Q 024661          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH---  245 (264)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~---  245 (264)
                      |+||||++++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++....   
T Consensus        77 ~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  155 (292)
T 3o0g_A           77 TLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV  155 (292)
T ss_dssp             EEEEECCSEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC
T ss_pred             EEEEecCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc
Confidence            9999999888888877643 479999999999999999999999999999999999999999999999999997533   


Q ss_pred             ---CCcccceeeeeceeEe
Q 024661          246 ---AFSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ---~~~~~~~~y~ape~~~  261 (264)
                         ....+|..|+|||++.
T Consensus       156 ~~~~~~~~t~~y~aPE~~~  174 (292)
T 3o0g_A          156 RCYSAEVVTLWYRPPDVLF  174 (292)
T ss_dssp             SCCCSCCSCGGGCCHHHHT
T ss_pred             ccccCCccccCCcChHHHc
Confidence               2335788999999864

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=1.1e-34  Score=241.95  Aligned_cols=164  Identities=17%  Similarity=0.295  Sum_probs=147.2

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEec-hhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS-INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      ++|.+.+.||+|+||.||+|.+..+++.||+|.+.. .....+.+.+|+++++.++|+|+     +++++++.+.+..++
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~~~~~~l   84 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNV-----LKFIGVLYKDKRLNF   84 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEEEETTEEEE
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCc-----ccEEEEEecCCeeEE
Confidence            679999999999999999999999999999998764 34556788999999999998887     999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---  246 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---  246 (264)
                      ||||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....   
T Consensus        85 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  163 (310)
T 3s95_A           85 ITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT  163 (310)
T ss_dssp             EEECCTTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC----
T ss_pred             EEEecCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccc
Confidence            99999 899999998743 4699999999999999999999999999999999999999999999999999975322   


Q ss_pred             -----------------CcccceeeeeceeEe
Q 024661          247 -----------------FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 -----------------~~~~~~~y~ape~~~  261 (264)
                                       ...+|..|+|||++.
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  195 (310)
T 3s95_A          164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMIN  195 (310)
T ss_dssp             ----------------CCCCSCGGGCCHHHHT
T ss_pred             cccccccccccccccccccCCCcceeCHHHhc
Confidence                             335788899999864

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=9.2e-35  Score=250.02  Aligned_cols=183  Identities=35%  Similarity=0.557  Sum_probs=158.7

Q ss_pred             CceEEeeCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCC---CcceE
Q 024661           80 GHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG---GTRCV  156 (264)
Q Consensus        80 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~---~~~~~  156 (264)
                      +..++..++.+.++|++.++||+|+||.||+|.+..+++.||+|+++......+.+.+|+.+++.+.|.+..   +++++
T Consensus        25 ~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv  104 (397)
T 1wak_A           25 GYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVV  104 (397)
T ss_dssp             -CCSSCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBC
T ss_pred             CceEEehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceee
Confidence            345677788899999999999999999999999999999999999987777778889999999999976533   45679


Q ss_pred             EEceeee----eCCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEeecCC
Q 024661          157 QIRNWFD----YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAE  231 (264)
Q Consensus       157 ~~~~~~~----~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~Nili~~~~  231 (264)
                      ++++++.    +...+|+|||+++++|.+++.......+++..++.++.||+.||.|||++ ||+||||||+|||++.++
T Consensus       105 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~  184 (397)
T 1wak_A          105 QLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNE  184 (397)
T ss_dssp             CEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCH
T ss_pred             eeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccc
Confidence            9999987    56789999999998999888876555799999999999999999999998 999999999999999775


Q ss_pred             -------------------------------------------------cEEeccCCCCCcCC---CCcccceeeeecee
Q 024661          232 -------------------------------------------------YVKVPDYKVPSPRH---AFSFQTFLSMASRV  259 (264)
Q Consensus       232 -------------------------------------------------~v~l~Dfg~a~~~~---~~~~~~~~y~ape~  259 (264)
                                                                       .+||+|||++....   ....+|..|||||+
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~  264 (397)
T 1wak_A          185 QYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEV  264 (397)
T ss_dssp             HHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHH
T ss_pred             hhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChh
Confidence                                                             79999999997543   23458999999998


Q ss_pred             Eee
Q 024661          260 YIC  262 (264)
Q Consensus       260 ~~~  262 (264)
                      +.+
T Consensus       265 ~~~  267 (397)
T 1wak_A          265 LIG  267 (397)
T ss_dssp             HHT
T ss_pred             hcC
Confidence            653

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=1.2e-34  Score=252.80  Aligned_cols=168  Identities=21%  Similarity=0.337  Sum_probs=147.7

Q ss_pred             CCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeee
Q 024661           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~  163 (264)
                      ...+.++|++.+.||+|+||.||+|.+..+|+.+|+|++....   ...+.+.+|+.+++.++|+|+     +++++++.
T Consensus         6 ~~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnI-----v~l~~~~~   80 (444)
T 3soa_A            6 CTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNI-----VRLHDSIS   80 (444)
T ss_dssp             -CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTB-----CCEEEEEE
T ss_pred             cccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCC-----CeEEEEEE
Confidence            3466788999999999999999999999999999999987532   345678899999999999988     99999999


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec---CCcEEeccCC
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS---AEYVKVPDYK  239 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~---~~~v~l~Dfg  239 (264)
                      +.+..|+||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.   ++.+||+|||
T Consensus        81 ~~~~~~lv~E~~~gg~L~~~i~~~~--~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG  158 (444)
T 3soa_A           81 EEGHHYLIFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFG  158 (444)
T ss_dssp             CSSEEEEEECCCBCCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCS
T ss_pred             ECCEEEEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCc
Confidence            999999999999 999999998865  7999999999999999999999999999999999999994   5789999999


Q ss_pred             CCCcCCC------CcccceeeeeceeEe
Q 024661          240 VPSPRHA------FSFQTFLSMASRVYI  261 (264)
Q Consensus       240 ~a~~~~~------~~~~~~~y~ape~~~  261 (264)
                      ++.....      ...||..|||||++.
T Consensus       159 ~a~~~~~~~~~~~~~~gt~~Y~APE~l~  186 (444)
T 3soa_A          159 LAIEVEGEQQAWFGFAGTPGYLSPEVLR  186 (444)
T ss_dssp             SCBCCCTTCCBCCCSCSCGGGCCHHHHT
T ss_pred             eeEEecCCCceeecccCCcccCCHHHhc
Confidence            9976432      235899999999864

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=6.3e-35  Score=243.75  Aligned_cols=170  Identities=28%  Similarity=0.409  Sum_probs=147.3

Q ss_pred             eCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceee
Q 024661           86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (264)
Q Consensus        86 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~  162 (264)
                      ..+.+.++|++.++||+|+||.||+|.+. +++.||+|++....   .....+.+|+.+++.++|+|+     +++++++
T Consensus        15 ~~q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~   88 (311)
T 3niz_A           15 YFQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI-----VSLIDVI   88 (311)
T ss_dssp             CEECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTB-----CCEEEEE
T ss_pred             eecchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCE-----eeeeeEE
Confidence            34577789999999999999999999985 58899999987432   234678899999999998887     9999999


Q ss_pred             eeCCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          163 DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       163 ~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                      .+.+.+|+||||+.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus        89 ~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~  167 (311)
T 3niz_A           89 HSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR  167 (311)
T ss_dssp             CCSSCEEEEEECCSEEHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             ccCCEEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCce
Confidence            9999999999999889999988654 469999999999999999999999999999999999999999999999999997


Q ss_pred             cCC------CCcccceeeeeceeEee
Q 024661          243 PRH------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       243 ~~~------~~~~~~~~y~ape~~~~  262 (264)
                      ...      ....+|..|+|||++.+
T Consensus       168 ~~~~~~~~~~~~~~t~~y~aPE~~~~  193 (311)
T 3niz_A          168 AFGIPVRSYTHEVVTLWYRAPDVLMG  193 (311)
T ss_dssp             ETTSCCC---CCCCCCTTCCHHHHTT
T ss_pred             ecCCCcccccCCcccCCcCCHHHhcC
Confidence            543      23357889999998653

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=1.1e-34  Score=247.08  Aligned_cols=171  Identities=22%  Similarity=0.335  Sum_probs=149.3

Q ss_pred             EeeCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEce
Q 024661           84 FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (264)
Q Consensus        84 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~  160 (264)
                      ......+.++|++.+.||+|+||.||+|.+..+++.||+|++....   ...+.+.+|+.+++.++|+|+     +++++
T Consensus        21 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnI-----v~~~~   95 (362)
T 2bdw_A           21 MNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI-----VRLHD   95 (362)
T ss_dssp             ---CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTB-----CCEEE
T ss_pred             ecCCCCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCC-----CeEEE
Confidence            3345567788999999999999999999999999999999997532   345678899999999999888     99999


Q ss_pred             eeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC---cEEec
Q 024661          161 WFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE---YVKVP  236 (264)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~---~v~l~  236 (264)
                      ++.+.+..|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++   .+||+
T Consensus        96 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~  173 (362)
T 2bdw_A           96 SIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLA  173 (362)
T ss_dssp             EEECSSEEEEEECCCCSCBHHHHHTTCS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEEC
T ss_pred             EEEeCCEEEEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEe
Confidence            999999999999999 899999998765  799999999999999999999999999999999999998654   59999


Q ss_pred             cCCCCCcCCC-----CcccceeeeeceeEe
Q 024661          237 DYKVPSPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       237 Dfg~a~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      |||++.....     ...+|..|+|||++.
T Consensus       174 DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~  203 (362)
T 2bdw_A          174 DFGLAIEVNDSEAWHGFAGTPGYLSPEVLK  203 (362)
T ss_dssp             CCTTCBCCTTCCSCCCSCSCTTTCCHHHHT
T ss_pred             ecCcceEecCCcccccCCCCccccCHHHHc
Confidence            9999976543     235889999999864

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.5e-34  Score=241.43  Aligned_cols=171  Identities=23%  Similarity=0.280  Sum_probs=145.4

Q ss_pred             eeCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHH-hccCCCCcceEEEce
Q 024661           85 AIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRN  160 (264)
Q Consensus        85 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~  160 (264)
                      ..++.+.++|++.++||+|+||+||+|.+..+++.||+|++...   .........|+..+..+ .|+|+     +++++
T Consensus        50 ~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~i-----v~l~~  124 (311)
T 3p1a_A           50 RPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCC-----VRLEQ  124 (311)
T ss_dssp             SSSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTB-----CCEEE
T ss_pred             CccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcE-----EEEEE
Confidence            34566778899999999999999999999999999999988642   23334455566555555 67766     99999


Q ss_pred             eeeeCCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCC
Q 024661          161 WFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV  240 (264)
Q Consensus       161 ~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~  240 (264)
                      ++.+.+.+|+|||+++++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus       125 ~~~~~~~~~lv~e~~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~  203 (311)
T 3p1a_A          125 AWEEGGILYLQTELCGPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGL  203 (311)
T ss_dssp             EEEETTEEEEEEECCCCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTT
T ss_pred             EEEeCCEEEEEEeccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEcccee
Confidence            999999999999999999999988764 4699999999999999999999999999999999999999999999999999


Q ss_pred             CCcCCC-----CcccceeeeeceeEe
Q 024661          241 PSPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       241 a~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      +.....     ...+|..|+|||++.
T Consensus       204 a~~~~~~~~~~~~~gt~~y~aPE~~~  229 (311)
T 3p1a_A          204 LVELGTAGAGEVQEGDPRYMAPELLQ  229 (311)
T ss_dssp             CEECC------CCCCCGGGCCGGGGG
T ss_pred             eeecccCCCCcccCCCccccCHhHhc
Confidence            875432     334788999999764

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=1.5e-34  Score=245.35  Aligned_cols=168  Identities=26%  Similarity=0.337  Sum_probs=146.7

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh------hHHHHHHHHHHHHHHhccCCCCcceEEEceee
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK------YREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~  162 (264)
                      .+.++|++.+.||+|+||.||+|.++.+++.||+|++.....      ..+.+.+|+.+++.++|+|+     +++++++
T Consensus        21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI-----v~~~~~~   95 (351)
T 3c0i_A           21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI-----VELLETY   95 (351)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTB-----CCEEEEE
T ss_pred             ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCC-----CcEEEEE
Confidence            456789999999999999999999999999999999974321      35778999999999999888     9999999


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCc---EEec
Q 024661          163 DYRNHICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY---VKVP  236 (264)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~---v~l~  236 (264)
                      .+.+.+|+||||+ +++|.+++...  ....+++..++.++.||+.||.|||++||+||||||+|||++.++.   +||+
T Consensus        96 ~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~  175 (351)
T 3c0i_A           96 SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLG  175 (351)
T ss_dssp             EETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEEC
T ss_pred             EeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEe
Confidence            9999999999999 89999888643  2235899999999999999999999999999999999999987654   9999


Q ss_pred             cCCCCCcCCC------CcccceeeeeceeEe
Q 024661          237 DYKVPSPRHA------FSFQTFLSMASRVYI  261 (264)
Q Consensus       237 Dfg~a~~~~~------~~~~~~~y~ape~~~  261 (264)
                      |||++.....      ...+|..|+|||++.
T Consensus       176 Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~  206 (351)
T 3c0i_A          176 GFGVAIQLGESGLVAGGRVGTPHFMAPEVVK  206 (351)
T ss_dssp             CCTTCEECCTTSCBCCCCCSCGGGCCHHHHT
T ss_pred             cCcceeEecCCCeeecCCcCCcCccCHHHHc
Confidence            9999976432      335889999999864

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=1e-34  Score=252.94  Aligned_cols=165  Identities=25%  Similarity=0.342  Sum_probs=146.3

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .+.++|++.+.||+|+||.||+|.+..+++.||||++...   ....+.+.+|+.+++.++|+|+     +++++++...
T Consensus        23 ~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nI-----v~l~~~~~~~   97 (432)
T 3n9x_A           23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI-----IRLYDLIIPD   97 (432)
T ss_dssp             CCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTB-----CCEEEECCCS
T ss_pred             eecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCc-----ceEEEEEecC
Confidence            5668899999999999999999999999999999999742   3445678899999999999887     9999998775


Q ss_pred             -----CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCC
Q 024661          166 -----NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV  240 (264)
Q Consensus       166 -----~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~  240 (264)
                           ..+|+|||+++++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus        98 ~~~~~~~~~lv~e~~~~~L~~~~~~~~--~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGl  175 (432)
T 3n9x_A           98 DLLKFDELYIVLEIADSDLKKLFKTPI--FLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGL  175 (432)
T ss_dssp             CTTTCCCEEEEEECCSEEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             CCCcCCeEEEEEecCCcCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCC
Confidence                 6799999999889999998764  799999999999999999999999999999999999999999999999999


Q ss_pred             CCcCC----------------------------CCcccceeeeeceeE
Q 024661          241 PSPRH----------------------------AFSFQTFLSMASRVY  260 (264)
Q Consensus       241 a~~~~----------------------------~~~~~~~~y~ape~~  260 (264)
                      |+...                            ....+|..|+|||++
T Consensus       176 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~  223 (432)
T 3n9x_A          176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELI  223 (432)
T ss_dssp             CEEC-------------------------------CCCCCTTCCHHHH
T ss_pred             cccccccccccccccccccccccccccchhccccCCCCCccccCHHHH
Confidence            97643                            233578899999975

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=1e-34  Score=247.99  Aligned_cols=164  Identities=22%  Similarity=0.355  Sum_probs=135.8

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh----hHHHHHHHHHH-HHHHhccCCCCcceEEEceeeeeCC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDV-LQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~-l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      ++|++++.||+|+||.||+|+++.+++.||+|++++...    ....+.+|..+ ++.+.|+++     +++++++.+.+
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~I-----v~l~~~~~~~~  112 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFL-----VGLHFSFQTAD  112 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTB-----CCEEEEEECSS
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCC-----CCEEEEEEeCC
Confidence            679999999999999999999999999999999976432    23344455544 344555555     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC-
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR-  244 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~-  244 (264)
                      .+|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+++.. 
T Consensus       113 ~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~  190 (373)
T 2r5t_A          113 KLYFVLDYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENI  190 (373)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGB
T ss_pred             EEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccc
Confidence            999999999 899999998765  7999999999999999999999999999999999999999999999999999752 


Q ss_pred             -----CCCcccceeeeeceeEee
Q 024661          245 -----HAFSFQTFLSMASRVYIC  262 (264)
Q Consensus       245 -----~~~~~~~~~y~ape~~~~  262 (264)
                           ....+||..|||||++.+
T Consensus       191 ~~~~~~~~~~gt~~y~aPE~~~~  213 (373)
T 2r5t_A          191 EHNSTTSTFCGTPEYLAPEVLHK  213 (373)
T ss_dssp             CCCCCCCSBSCCCCCCCHHHHTT
T ss_pred             cCCCccccccCCccccCHHHhCC
Confidence                 223468999999998643

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=3e-34  Score=241.62  Aligned_cols=179  Identities=42%  Similarity=0.724  Sum_probs=157.9

Q ss_pred             EeeCCccCCCeEEEeecccCccEEEEEEEe-CCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCC-CCcceEEEcee
Q 024661           84 FAIGENLTPRYRILSKMGEGTFGQVVECFD-NEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI-GGTRCVQIRNW  161 (264)
Q Consensus        84 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~-~~~~~~~~~~~  161 (264)
                      ...++.+.++|++.+.||+|+||.||+|.+ ..+++.||+|+++......+.+.+|+.+++.+.|++. .++++++++++
T Consensus         6 ~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~   85 (339)
T 1z57_A            6 CQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEW   85 (339)
T ss_dssp             CSTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEE
T ss_pred             eecCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecc
Confidence            445778889999999999999999999998 5678999999998766777888999999999999763 34567999999


Q ss_pred             eeeCCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec------------
Q 024661          162 FDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS------------  229 (264)
Q Consensus       162 ~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~------------  229 (264)
                      +.+.+.+|+|||+++++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.            
T Consensus        86 ~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~  165 (339)
T 1z57_A           86 FEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIK  165 (339)
T ss_dssp             EEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----
T ss_pred             cccCCcEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccc
Confidence            99999999999999999999998876567899999999999999999999999999999999999987            


Q ss_pred             -------CCcEEeccCCCCCcCCC---CcccceeeeeceeEee
Q 024661          230 -------AEYVKVPDYKVPSPRHA---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       230 -------~~~v~l~Dfg~a~~~~~---~~~~~~~y~ape~~~~  262 (264)
                             ++.+||+|||++.....   ...+|..|+|||++.+
T Consensus       166 ~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~  208 (339)
T 1z57_A          166 RDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILA  208 (339)
T ss_dssp             CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTT
T ss_pred             cccccccCCCceEeeCcccccCccccccccCCccccChHHhhC
Confidence                   66899999999976443   3468899999998653

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=4.4e-35  Score=245.93  Aligned_cols=166  Identities=23%  Similarity=0.363  Sum_probs=145.7

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      +.++|++.+.||+|+||.||+|.+..+++.||+|++....  ...+.+.+|+.+++.+.|+|+     +++++++.+.+.
T Consensus         5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnI-----v~~~~~~~~~~~   79 (323)
T 3tki_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV-----VKFYGHRREGNI   79 (323)
T ss_dssp             TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTB-----CCEEEEEECSSE
T ss_pred             HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCC-----CeEEEEEecCCe
Confidence            4578999999999999999999999999999999987433  334677899999999999888     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC-
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH-  245 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~-  245 (264)
                      .|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.... 
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  157 (323)
T 3tki_A           80 QYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY  157 (323)
T ss_dssp             EEEEEECCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred             EEEEEEcCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceecc
Confidence            99999999 889999987654  69999999999999999999999999999999999999999999999999996432 


Q ss_pred             -------CCcccceeeeeceeEee
Q 024661          246 -------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 -------~~~~~~~~y~ape~~~~  262 (264)
                             ....+|..|+|||++.+
T Consensus       158 ~~~~~~~~~~~gt~~y~aPE~~~~  181 (323)
T 3tki_A          158 NNRERLLNKMCGTLPYVAPELLKR  181 (323)
T ss_dssp             TTEECCBCSCCSCGGGSCHHHHHC
T ss_pred             CCcccccCCCccCcCccCcHHhcc
Confidence                   23468899999998643

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.5e-34  Score=243.01  Aligned_cols=167  Identities=25%  Similarity=0.458  Sum_probs=148.6

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh-------hHHHHHHHHHHHHHHhccCCCCcceEEEce
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~  160 (264)
                      +.+.++|++.+.||+|+||.||+|.+..+++.||+|++.....       ..+.+.+|+.+++.++|+|+     +++++
T Consensus         7 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~   81 (326)
T 2y0a_A            7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV-----ITLHE   81 (326)
T ss_dssp             SCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTB-----CCEEE
T ss_pred             CCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCC-----CcEEE
Confidence            3556789999999999999999999999999999999875321       35778899999999999887     99999


Q ss_pred             eeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC----cEEe
Q 024661          161 WFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE----YVKV  235 (264)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~----~v~l  235 (264)
                      ++.+...+|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++    .+||
T Consensus        82 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl  159 (326)
T 2y0a_A           82 VYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI  159 (326)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHTTSS--CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEE
T ss_pred             EEEeCCEEEEEEEcCCCCCHHHHHHhcC--CcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEE
Confidence            999999999999999 899999997654  799999999999999999999999999999999999999887    8999


Q ss_pred             ccCCCCCcCC-----CCcccceeeeeceeEe
Q 024661          236 PDYKVPSPRH-----AFSFQTFLSMASRVYI  261 (264)
Q Consensus       236 ~Dfg~a~~~~-----~~~~~~~~y~ape~~~  261 (264)
                      +|||++....     ....+|..|+|||++.
T Consensus       160 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~  190 (326)
T 2y0a_A          160 IDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN  190 (326)
T ss_dssp             CCCTTCEECCTTSCCCCCCSCTTTCCHHHHT
T ss_pred             EECCCCeECCCCCccccccCCcCcCCceeec
Confidence            9999997643     2345888999999764

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=5e-34  Score=241.80  Aligned_cols=185  Identities=42%  Similarity=0.794  Sum_probs=161.3

Q ss_pred             CCCCceEEeeCCccCCCeEEEeecccCccEEEEEEEeCCCC-cEEEEEEEechhhhHHHHHHHHHHHHHHhccCC-CCcc
Q 024661           77 DKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKK-ELVAIKIVRSINKYREAAMIEIDVLQRLARHDI-GGTR  154 (264)
Q Consensus        77 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~-~~~~  154 (264)
                      +..+.+....++.+.++|++.+.||+|+||.||+|.+..++ +.||+|+++......+.+.+|+.+++.+.|++. .+..
T Consensus         4 ~~~~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~   83 (355)
T 2eu9_A            4 DKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFL   83 (355)
T ss_dssp             CTTSCBCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSC
T ss_pred             ccCCCcccccCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCcee
Confidence            34456667788899999999999999999999999998776 689999998766777888999999999998763 3345


Q ss_pred             eEEEceeeeeCCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEe-------
Q 024661          155 CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL-------  227 (264)
Q Consensus       155 ~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili-------  227 (264)
                      ++.+++++...+..|+|||+++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||+       
T Consensus        84 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~  163 (355)
T 2eu9_A           84 CVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFET  163 (355)
T ss_dssp             BCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEE
T ss_pred             EEEeeeeeeeCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccc
Confidence            6889999999999999999999999998887655679999999999999999999999999999999999999       


Q ss_pred             ------------ecCCcEEeccCCCCCcCCC---CcccceeeeeceeEe
Q 024661          228 ------------VSAEYVKVPDYKVPSPRHA---FSFQTFLSMASRVYI  261 (264)
Q Consensus       228 ------------~~~~~v~l~Dfg~a~~~~~---~~~~~~~y~ape~~~  261 (264)
                                  +.++.+||+|||++.....   ...+|..|+|||++.
T Consensus       164 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~  212 (355)
T 2eu9_A          164 LYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVIL  212 (355)
T ss_dssp             EECCC-CCCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHT
T ss_pred             cccccccccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeee
Confidence                        6778999999999975432   346889999999864

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=2.6e-34  Score=247.10  Aligned_cols=167  Identities=16%  Similarity=0.193  Sum_probs=148.9

Q ss_pred             CCCeEEEeecccC--ccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           91 TPRYRILSKMGEG--TFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        91 ~~~y~~~~~lg~G--~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .++|++.+.||+|  +||.||+|++..+++.||+|+++..   ....+.+.+|+.+++.++|+|+     +++++++.+.
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~   98 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNI-----VPYRATFIAD   98 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEEEET
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCC-----CcEeEEEEEC
Confidence            3679999999999  9999999999999999999999754   3445678889999999999888     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      +.+|+||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||.+...
T Consensus        99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~  178 (389)
T 3gni_B           99 NELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSM  178 (389)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred             CEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence            9999999999 899999998875557999999999999999999999999999999999999999999999999987532


Q ss_pred             -------------CCCcccceeeeeceeEee
Q 024661          245 -------------HAFSFQTFLSMASRVYIC  262 (264)
Q Consensus       245 -------------~~~~~~~~~y~ape~~~~  262 (264)
                                   .....+|..|+|||++.+
T Consensus       179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  209 (389)
T 3gni_B          179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQ  209 (389)
T ss_dssp             EETTEECSCBCCCCTTCTTTGGGSCHHHHST
T ss_pred             ccccccccccccccccccccccccCHHHHhc
Confidence                         122367888999998754

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=2.1e-34  Score=256.89  Aligned_cols=168  Identities=21%  Similarity=0.306  Sum_probs=149.8

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ...++|++.+.||+|+||.||+|.+..+|+.||+|++.+..    .....+.+|+.+++.+.|+++     +++++++.+
T Consensus       181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~I-----v~l~~~~~~  255 (576)
T 2acx_A          181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFV-----VSLAYAYET  255 (576)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTB-----CCEEEEEEC
T ss_pred             ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCE-----eeEEEEEee
Confidence            34467999999999999999999999999999999997532    234567889999999998887     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      .+.+|+||||+ ||+|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|..
T Consensus       256 ~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~  335 (576)
T 2acx_A          256 KDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVH  335 (576)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEeccccee
Confidence            99999999999 99999999876545699999999999999999999999999999999999999999999999999976


Q ss_pred             CCC-----CcccceeeeeceeEe
Q 024661          244 RHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~-----~~~~~~~y~ape~~~  261 (264)
                      ...     ...||..|||||++.
T Consensus       336 ~~~~~~~~~~~GT~~Y~APEvl~  358 (576)
T 2acx_A          336 VPEGQTIKGRVGTVGYMAPEVVK  358 (576)
T ss_dssp             CCTTCCEECCCSCGGGCCHHHHT
T ss_pred             cccCccccccCCCccccCHHHHc
Confidence            432     346899999999864

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.5e-34  Score=248.46  Aligned_cols=168  Identities=24%  Similarity=0.379  Sum_probs=138.8

Q ss_pred             CCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHh-ccCCCCcceEEEceee
Q 024661           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWF  162 (264)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~  162 (264)
                      +..+.++|++.+.||+|+||.||+|.+..+++.||+|++.+.   ........+|+.+++.+. |+|+     +++++++
T Consensus         4 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~ni-----v~l~~~~   78 (388)
T 3oz6_A            4 DRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENI-----VNLLNVL   78 (388)
T ss_dssp             CHHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTB-----CCEEEEE
T ss_pred             cCcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCC-----CeeeeEE
Confidence            445668899999999999999999999999999999998632   345567788999999997 8877     9999998


Q ss_pred             eeC--CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCC
Q 024661          163 DYR--NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV  240 (264)
Q Consensus       163 ~~~--~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~  240 (264)
                      ...  ..+|+||||++++|.+++...   .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus        79 ~~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~  155 (388)
T 3oz6_A           79 RADNDRDVYLVFDYMETDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGL  155 (388)
T ss_dssp             ECTTSSCEEEEEECCSEEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             ecCCCCEEEEEecccCcCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcc
Confidence            754  479999999988999999874   599999999999999999999999999999999999999999999999999


Q ss_pred             CCcCC---------------------------CCcccceeeeeceeEee
Q 024661          241 PSPRH---------------------------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       241 a~~~~---------------------------~~~~~~~~y~ape~~~~  262 (264)
                      |+...                           ....+|..|+|||++.+
T Consensus       156 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  204 (388)
T 3oz6_A          156 SRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG  204 (388)
T ss_dssp             CEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTT
T ss_pred             cccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcC
Confidence            96532                           12358899999998753

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=2e-34  Score=252.98  Aligned_cols=173  Identities=23%  Similarity=0.351  Sum_probs=143.9

Q ss_pred             ceEEeeCC---ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcc
Q 024661           81 HYVFAIGE---NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR  154 (264)
Q Consensus        81 ~~~~~~~~---~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~  154 (264)
                      .+.+..++   .+.++|++++.||+|+||.||+|.+..+++.||||++.+.   ....+.+.+|+.+++.++|+|+    
T Consensus        48 ~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI----  123 (464)
T 3ttj_A           48 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI----  123 (464)
T ss_dssp             EEEEEC--CEEEEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTB----
T ss_pred             ceeeecCCcceeecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCC----
Confidence            44555554   4568899999999999999999999999999999999753   3445678899999999999888    


Q ss_pred             eEEEceeeeeC------CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEee
Q 024661          155 CVQIRNWFDYR------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV  228 (264)
Q Consensus       155 ~~~~~~~~~~~------~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~  228 (264)
                       +++++++...      ..+|+||||++++|.+.+..    .+++..++.++.||+.||+|||++||+||||||+|||++
T Consensus       124 -v~l~~~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~  198 (464)
T 3ttj_A          124 -ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK  198 (464)
T ss_dssp             -CCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred             -CcEEEEEccCCccccCCeEEEEEeCCCCCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEe
Confidence             9999998654      46899999998888887753    589999999999999999999999999999999999999


Q ss_pred             cCCcEEeccCCCCCcCCC-----CcccceeeeeceeEee
Q 024661          229 SAEYVKVPDYKVPSPRHA-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       229 ~~~~v~l~Dfg~a~~~~~-----~~~~~~~y~ape~~~~  262 (264)
                      .++.+||+|||+|+....     ...+|..|+|||++.+
T Consensus       199 ~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~  237 (464)
T 3ttj_A          199 SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG  237 (464)
T ss_dssp             TTSCEEECCCCCC-----CCCC----CCCTTCCHHHHTT
T ss_pred             CCCCEEEEEEEeeeecCCCcccCCCcccccccCHHHHcC
Confidence            999999999999986543     2457889999998754

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=4.6e-34  Score=245.05  Aligned_cols=182  Identities=34%  Similarity=0.605  Sum_probs=159.9

Q ss_pred             ceEEeeCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHh-ccCCCCcceEEEc
Q 024661           81 HYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA-RHDIGGTRCVQIR  159 (264)
Q Consensus        81 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~  159 (264)
                      .+.+..++.+.++|++.+.||+|+||.||+|.+..+++.||+|+++........+.+|+.+++.+. |+++.+.+++.++
T Consensus        43 ~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  122 (382)
T 2vx3_A           43 DYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLK  122 (382)
T ss_dssp             CBCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEE
T ss_pred             cEEeecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEee
Confidence            456677888899999999999999999999999999999999999876666778888999999997 5556666789999


Q ss_pred             eeeeeCCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH--HCCCeecCCCCCCEEee--cCCcEEe
Q 024661          160 NWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH--ELRLIHTDLKPENILLV--SAEYVKV  235 (264)
Q Consensus       160 ~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH--~~~ivH~dikp~Nili~--~~~~v~l  235 (264)
                      +++...+..|+|||+++++|.+++.......+++..++.++.||+.||.|||  +.||+||||||+|||++  .++.+||
T Consensus       123 ~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL  202 (382)
T 2vx3_A          123 RHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKI  202 (382)
T ss_dssp             EEEEETTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEE
T ss_pred             eeeccCCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEE
Confidence            9999999999999999889999999875557999999999999999999999  57999999999999995  4678999


Q ss_pred             ccCCCCCcCCC---CcccceeeeeceeEee
Q 024661          236 PDYKVPSPRHA---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       236 ~Dfg~a~~~~~---~~~~~~~y~ape~~~~  262 (264)
                      +|||++.....   ...+|..|+|||++.+
T Consensus       203 ~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~  232 (382)
T 2vx3_A          203 VDFGSSCQLGQRIYQYIQSRFYRSPEVLLG  232 (382)
T ss_dssp             CCCTTCEETTCCCCSSCSCGGGCCHHHHTT
T ss_pred             EeccCceecccccccccCCccccChHHHcC
Confidence            99999976433   3468899999998654

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=2.4e-34  Score=241.86  Aligned_cols=166  Identities=22%  Similarity=0.315  Sum_probs=139.5

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeC---CCCcEEEEEEEechh-----hhHHHHHHHHHHHHHHhccCCCCcceEEEce
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~  160 (264)
                      ...++|++.+.||+|+||.||+|++.   .+++.||+|++++..     .....+.+|+.+++.+.|+|+     +++++
T Consensus        14 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~   88 (327)
T 3a62_A           14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI-----VDLIY   88 (327)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTB-----CCEEE
T ss_pred             CCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCc-----cceeE
Confidence            34478999999999999999999985   678999999987532     234567789999999998887     99999


Q ss_pred             eeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          161 WFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                      ++.+.+.+|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus        89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg  166 (327)
T 3a62_A           89 AFQTGGKLYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFG  166 (327)
T ss_dssp             EEECSSCEEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCS
T ss_pred             EEEcCCEEEEEEeCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCC
Confidence            999999999999999 899999998765  78999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCC------CCcccceeeeeceeEe
Q 024661          240 VPSPRH------AFSFQTFLSMASRVYI  261 (264)
Q Consensus       240 ~a~~~~------~~~~~~~~y~ape~~~  261 (264)
                      ++....      ....+|..|||||++.
T Consensus       167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~  194 (327)
T 3a62_A          167 LCKESIHDGTVTHTFCGTIEYMAPEILM  194 (327)
T ss_dssp             CC----------CTTSSCCTTSCHHHHT
T ss_pred             cccccccCCccccccCCCcCccCHhhCc
Confidence            987532      2335889999999864

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=2e-34  Score=242.50  Aligned_cols=167  Identities=25%  Similarity=0.326  Sum_probs=146.5

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeCCE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++.... ..+.+.+|+.+++.+ .|+++     +++++++.+.+.
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i-----~~~~~~~~~~~~   79 (330)
T 2izr_A            6 MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGI-----PQVYYFGPCGKY   79 (330)
T ss_dssp             EETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTS-----CCEEEEEEETTE
T ss_pred             EEcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCC-----CEEEEEEecCCc
Confidence            45678999999999999999999999999999999987532 234678899999999 88877     999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCc-----EEeccCCCCC
Q 024661          168 ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY-----VKVPDYKVPS  242 (264)
Q Consensus       168 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~-----v~l~Dfg~a~  242 (264)
                      .|+||||++++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.     +||+|||++.
T Consensus        80 ~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~  158 (330)
T 2izr_A           80 NAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK  158 (330)
T ss_dssp             EEEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred             cEEEEEeCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence            99999999999999998753 47999999999999999999999999999999999999998887     9999999997


Q ss_pred             cCC-------------CCcccceeeeeceeEee
Q 024661          243 PRH-------------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       243 ~~~-------------~~~~~~~~y~ape~~~~  262 (264)
                      ...             ....+|..|+|||++.+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  191 (330)
T 2izr_A          159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLG  191 (330)
T ss_dssp             ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT
T ss_pred             eeecCCCCccccccccCCcCCCccccChHHHcC
Confidence            532             23458899999998653

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=3e-34  Score=255.05  Aligned_cols=167  Identities=23%  Similarity=0.315  Sum_probs=148.2

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      .++|.+.+.||+|+||.||+|+++.+|+.||+|++.+..    ...+.+.+|+.+++.++|+++     +++++++.+..
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~I-----v~l~~~~~~~~  258 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFI-----VSLAYAFETKT  258 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTB-----CCEEEEEECSS
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCE-----eeEEEEEeeCC
Confidence            467999999999999999999999999999999997543    234678889999999988887     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          167 HICIVFEKL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      .+|+||||+ |++|.+++....  ...+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||++..
T Consensus       259 ~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~  338 (543)
T 3c4z_A          259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVE  338 (543)
T ss_dssp             EEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeee
Confidence            999999999 899999998643  34699999999999999999999999999999999999999999999999999975


Q ss_pred             CCC------CcccceeeeeceeEee
Q 024661          244 RHA------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       244 ~~~------~~~~~~~y~ape~~~~  262 (264)
                      ...      ...||..|||||++.+
T Consensus       339 ~~~~~~~~~~~~GT~~Y~APE~l~~  363 (543)
T 3c4z_A          339 LKAGQTKTKGYAGTPGFMAPELLLG  363 (543)
T ss_dssp             CCTTCCCBCCCCSCTTTSCHHHHTT
T ss_pred             ccCCCcccccccCCccccChhhhcC
Confidence            332      2368999999998753

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=2.1e-34  Score=246.20  Aligned_cols=167  Identities=18%  Similarity=0.283  Sum_probs=143.3

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeC-------CCCcEEEEEEEech--hhhHHHHHHHHHHHHHH-hccCCCCcceEEEc
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDN-------EKKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIR  159 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~  159 (264)
                      ..++|++.+.||+|+||.||+|.+.       .++..||+|+++..  ....+.+.+|+.+++.+ +|+|+     ++++
T Consensus        79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnI-----v~~~  153 (370)
T 2psq_A           79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI-----INLL  153 (370)
T ss_dssp             CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTB-----CCEE
T ss_pred             cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCE-----eeEE
Confidence            3478999999999999999999874       34567999998753  34456789999999999 78887     9999


Q ss_pred             eeeeeCCEEEEEEecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 024661          160 NWFDYRNHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPEN  224 (264)
Q Consensus       160 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~N  224 (264)
                      +++.+.+.+|+||||+ +++|.+++....              ...+++..++.++.||+.||+|||++||+||||||+|
T Consensus       154 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  233 (370)
T 2psq_A          154 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN  233 (370)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             EEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhh
Confidence            9999999999999999 889999998653              1358899999999999999999999999999999999


Q ss_pred             EEeecCCcEEeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          225 ILLVSAEYVKVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       225 ili~~~~~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      ||++.++.+||+|||+++....        ...++..|||||++.
T Consensus       234 Ill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~  278 (370)
T 2psq_A          234 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF  278 (370)
T ss_dssp             EEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHH
T ss_pred             EEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhc
Confidence            9999999999999999975332        223567899999764

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=7.7e-34  Score=239.50  Aligned_cols=169  Identities=25%  Similarity=0.350  Sum_probs=150.2

Q ss_pred             eCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech----hhhHHHHHHHHHHHHHHhccCCCCcceEEEcee
Q 024661           86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNW  161 (264)
Q Consensus        86 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~  161 (264)
                      ......++|.+.+.||+|+||.||+|.+..+++.+|+|++...    ....+.+.+|+.+++.+.|+|+     ++++++
T Consensus        35 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~  109 (335)
T 2owb_A           35 VDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHV-----VGFHGF  109 (335)
T ss_dssp             EETTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTB-----CCEEEE
T ss_pred             cCcccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCC-----CeEEEE
Confidence            3445667899999999999999999999999999999998753    2456778899999999988887     999999


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCC
Q 024661          162 FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV  240 (264)
Q Consensus       162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~  240 (264)
                      +.+.+.+|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||+
T Consensus       110 ~~~~~~~~lv~e~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~  187 (335)
T 2owb_A          110 FEDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL  187 (335)
T ss_dssp             EECSSEEEEEECCCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred             EecCCeEEEEEecCCCCCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccC
Confidence            99999999999999 899999998765  799999999999999999999999999999999999999999999999999


Q ss_pred             CCcCC------CCcccceeeeeceeEe
Q 024661          241 PSPRH------AFSFQTFLSMASRVYI  261 (264)
Q Consensus       241 a~~~~------~~~~~~~~y~ape~~~  261 (264)
                      +....      ....++..|+|||++.
T Consensus       188 ~~~~~~~~~~~~~~~gt~~y~aPE~~~  214 (335)
T 2owb_A          188 ATKVEYDGERKKVLCGTPNYIAPEVLS  214 (335)
T ss_dssp             CEECCSTTCCBCCCCSCCSSCCHHHHH
T ss_pred             ceecccCcccccccCCCccccCHHHhc
Confidence            97543      2235788899999764

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=1.7e-34  Score=244.95  Aligned_cols=167  Identities=25%  Similarity=0.413  Sum_probs=136.0

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      +.+.++|++.+.||+|+||.||+|.+..+++.||+|+++... ..+.+.+|+.+++.+.|+|+     +++++++.+.+.
T Consensus        49 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~  122 (349)
T 2w4o_A           49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNI-----IKLKEIFETPTE  122 (349)
T ss_dssp             SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTB-----CCEEEEEECSSE
T ss_pred             ccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCC-----cceeeeEecCCe
Confidence            456788999999999999999999999999999999997543 34667889999999999887     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec---CCcEEeccCCCCCc
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS---AEYVKVPDYKVPSP  243 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~---~~~v~l~Dfg~a~~  243 (264)
                      .++||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.   ++.+||+|||++..
T Consensus       123 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~  200 (349)
T 2w4o_A          123 ISLVLELVTGGELFDRIVEKG--YYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKI  200 (349)
T ss_dssp             EEEEECCCCSCBHHHHHTTCS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred             EEEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence            99999999 899999998765  6999999999999999999999999999999999999976   88999999999976


Q ss_pred             CCC-----CcccceeeeeceeEee
Q 024661          244 RHA-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       244 ~~~-----~~~~~~~y~ape~~~~  262 (264)
                      ...     ...+|..|+|||++.+
T Consensus       201 ~~~~~~~~~~~gt~~y~aPE~~~~  224 (349)
T 2w4o_A          201 VEHQVLMKTVCGTPGYCAPEILRG  224 (349)
T ss_dssp             ------------CGGGSCHHHHTT
T ss_pred             cCcccccccccCCCCccCHHHhcC
Confidence            433     3357889999998643

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=2.1e-34  Score=245.74  Aligned_cols=170  Identities=18%  Similarity=0.199  Sum_probs=141.2

Q ss_pred             ccCCCeEEEeecccCccEEEEEEE-----eCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeee
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECF-----DNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~  163 (264)
                      ...++|.+.+.||+|+||.||+|.     +..+++.||+|+++..  ....+.+|+++++.+.+.  .|++++.+++++.
T Consensus        62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~--~~~~iv~~~~~~~  137 (365)
T 3e7e_A           62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPS--MQHMFMKFYSAHL  137 (365)
T ss_dssp             CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGG--GGGGBCCEEEEEE
T ss_pred             ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhh--hhhhhhhhheeee
Confidence            345789999999999999999994     6677899999998753  345677888888888732  1244599999999


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec----------
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKN---SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS----------  229 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~----------  229 (264)
                      ..+..|+||||+ +|+|.+++...   ....+++..++.++.||+.||+|||++||+||||||+|||++.          
T Consensus       138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~  217 (365)
T 3e7e_A          138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDD  217 (365)
T ss_dssp             CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC-----
T ss_pred             cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcccccc
Confidence            999999999999 89999999852   2346999999999999999999999999999999999999998          


Q ss_pred             -CCcEEeccCCCCCcCC--------CCcccceeeeeceeEee
Q 024661          230 -AEYVKVPDYKVPSPRH--------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       230 -~~~v~l~Dfg~a~~~~--------~~~~~~~~y~ape~~~~  262 (264)
                       ++.+||+|||+|+...        ....||..|||||++.+
T Consensus       218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  259 (365)
T 3e7e_A          218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSN  259 (365)
T ss_dssp             -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTT
T ss_pred             ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcC
Confidence             8999999999995422        23358999999998653

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=4.4e-34  Score=253.51  Aligned_cols=173  Identities=25%  Similarity=0.435  Sum_probs=149.8

Q ss_pred             eEEeeCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh--------------hhHHHHHHHHHHHHHHhc
Q 024661           82 YVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--------------KYREAAMIEIDVLQRLAR  147 (264)
Q Consensus        82 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~e~~~l~~l~~  147 (264)
                      +.......+.++|+++++||+|+||.||+|.+..+++.+|+|++.+..              ...+.+.+|+.+++.+.|
T Consensus        26 ~~~~~~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h  105 (504)
T 3q5i_A           26 YVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDH  105 (504)
T ss_dssp             GCCEECSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCC
T ss_pred             eeeccCCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCC
Confidence            344455677889999999999999999999999999999999987532              235678899999999998


Q ss_pred             cCCCCcceEEEceeeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEE
Q 024661          148 HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENIL  226 (264)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nil  226 (264)
                      +|+     +++++++.+...+|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||
T Consensus       106 pni-----v~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil  178 (504)
T 3q5i_A          106 PNI-----IKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENIL  178 (504)
T ss_dssp             TTB-----CCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred             CCC-----CeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEE
Confidence            887     99999999999999999999 899999998765  7999999999999999999999999999999999999


Q ss_pred             eecCC---cEEeccCCCCCcCCC-----CcccceeeeeceeEe
Q 024661          227 LVSAE---YVKVPDYKVPSPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       227 i~~~~---~v~l~Dfg~a~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      ++.++   .+||+|||++.....     ...+|..|+|||++.
T Consensus       179 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~  221 (504)
T 3q5i_A          179 LENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK  221 (504)
T ss_dssp             ESSTTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHT
T ss_pred             EecCCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhc
Confidence            99876   699999999975432     345899999999753

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=6e-36  Score=252.44  Aligned_cols=166  Identities=23%  Similarity=0.309  Sum_probs=140.1

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---------hhHHHHHHHHHHHHHHh---------ccCCC--
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------KYREAAMIEIDVLQRLA---------RHDIG--  151 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~e~~~l~~l~---------~~~~~--  151 (264)
                      ++|++.+.||+|+||.||+|++  +|+.||+|++....         ...+.+.+|+.+++.++         |+|+.  
T Consensus        20 ~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           20 EKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             ccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            6799999999999999999998  57999999997532         22377889999999997         66652  


Q ss_pred             ----------CcceEEEceeeee-------------CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Q 024661          152 ----------GTRCVQIRNWFDY-------------RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV  207 (264)
Q Consensus       152 ----------~~~~~~~~~~~~~-------------~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l  207 (264)
                                |+++++++++|.+             .+.+|+||||+ +|++.+.+..   ..+++..++.++.||+.||
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL  174 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASL  174 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHH
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHH
Confidence                      4566777777665             78999999999 7866666644   3689999999999999999


Q ss_pred             HHHH-HCCCeecCCCCCCEEeecCC--------------------cEEeccCCCCCcCCC-CcccceeeeeceeEee
Q 024661          208 AFMH-ELRLIHTDLKPENILLVSAE--------------------YVKVPDYKVPSPRHA-FSFQTFLSMASRVYIC  262 (264)
Q Consensus       208 ~~lH-~~~ivH~dikp~Nili~~~~--------------------~v~l~Dfg~a~~~~~-~~~~~~~y~ape~~~~  262 (264)
                      +||| ++||+||||||+|||++.++                    .+||+|||+|+.... ...+|..|||||++.+
T Consensus       175 ~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~g  251 (336)
T 2vuw_A          175 AVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTG  251 (336)
T ss_dssp             HHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGCC
T ss_pred             HHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhcC
Confidence            9999 99999999999999999987                    999999999987543 4468999999998764

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=5.3e-34  Score=241.71  Aligned_cols=166  Identities=26%  Similarity=0.321  Sum_probs=147.5

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech----hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|++...    ....+.+.+|+++++.++|+|+     +++++++.+.
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~~~~~~~  126 (348)
T 1u5q_A           52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNT-----IQYRGCYLRE  126 (348)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEEEET
T ss_pred             hhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEEEC
Confidence            445699999999999999999999999999999998742    2344678899999999999888     9999999999


Q ss_pred             CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          166 NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       166 ~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      +..|+||||+.|+|.+++.... ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus       127 ~~~~lv~e~~~g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  205 (348)
T 1u5q_A          127 HTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA  205 (348)
T ss_dssp             TEEEEEEECCSEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred             CeEEEEEecCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence            9999999999889999887543 469999999999999999999999999999999999999999999999999997654


Q ss_pred             C--CcccceeeeeceeEe
Q 024661          246 A--FSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ~--~~~~~~~y~ape~~~  261 (264)
                      .  ...+|..|+|||++.
T Consensus       206 ~~~~~~gt~~y~aPE~~~  223 (348)
T 1u5q_A          206 PANSFVGTPYWMAPEVIL  223 (348)
T ss_dssp             SBCCCCSCGGGCCHHHHH
T ss_pred             CCCcccCCcceeCHhhhc
Confidence            3  346899999999874

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=2e-34  Score=242.12  Aligned_cols=168  Identities=26%  Similarity=0.306  Sum_probs=141.9

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC-
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN-  166 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~-  166 (264)
                      +.++|++.+.||+|+||.||+|++..+++.||+|+++..  ....+.+.+|+.+++.++|+|+     +++++++.+.. 
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~~~~~~~~~   78 (332)
T 3qd2_B            4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI-----VRYFNAWLETPP   78 (332)
T ss_dssp             HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTB-----CCEEEEEEECCS
T ss_pred             hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCE-----eeEEEEEEEecc
Confidence            446799999999999999999999999999999998742  3456788999999999998888     88988875532 


Q ss_pred             --------------------------------------------------------EEEEEEecC-CCCHHHHHHhcCC-
Q 024661          167 --------------------------------------------------------HICIVFEKL-GPSLYDFLRKNSY-  188 (264)
Q Consensus       167 --------------------------------------------------------~~~lv~e~~-~~~L~~~l~~~~~-  188 (264)
                                                                              .+|+||||+ +++|.+++..... 
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~  158 (332)
T 3qd2_B           79 EKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL  158 (332)
T ss_dssp             CHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG
T ss_pred             chhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc
Confidence                                                                    489999999 8999999986541 


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC------------------ccc
Q 024661          189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF------------------SFQ  250 (264)
Q Consensus       189 ~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~------------------~~~  250 (264)
                      ...++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......                  ..+
T Consensus       159 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g  238 (332)
T 3qd2_B          159 EDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG  238 (332)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence            23566678999999999999999999999999999999999999999999999764332                  358


Q ss_pred             ceeeeeceeEee
Q 024661          251 TFLSMASRVYIC  262 (264)
Q Consensus       251 ~~~y~ape~~~~  262 (264)
                      |..|+|||++.+
T Consensus       239 t~~y~aPE~~~~  250 (332)
T 3qd2_B          239 TKLYMSPEQIHG  250 (332)
T ss_dssp             CGGGSCHHHHHC
T ss_pred             CcCccChHHhcC
Confidence            889999998643

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=1.7e-34  Score=241.74  Aligned_cols=166  Identities=26%  Similarity=0.455  Sum_probs=132.8

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      .++|++.+.||+|+||.||+|.+..+++.||+|+++...  ...+.+.+|+.+++.++|+|+     +++++++.+++.+
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~~~~~   78 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENI-----VRLYDVIHTENKL   78 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTB-----CCEEEEECCTTEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCc-----ceEEEEEEECCeE
Confidence            357999999999999999999999999999999987432  334678899999999999888     9999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          169 CIVFEKLGPSLYDFLRKNS----YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      |+||||+.++|.+++....    ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus        79 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  158 (317)
T 2pmi_A           79 TLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAF  158 (317)
T ss_dssp             EEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred             EEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence            9999999889999987542    135899999999999999999999999999999999999999999999999999753


Q ss_pred             C------CCcccceeeeeceeEe
Q 024661          245 H------AFSFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~------~~~~~~~~y~ape~~~  261 (264)
                      .      ....+|..|+|||++.
T Consensus       159 ~~~~~~~~~~~~t~~y~aPE~~~  181 (317)
T 2pmi_A          159 GIPVNTFSSEVVTLWYRAPDVLM  181 (317)
T ss_dssp             TSCCCCCCCCCSCCTTCCHHHHT
T ss_pred             CCCcccCCCCcccccccCchHhh
Confidence            2      2335788999999864

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=9.6e-35  Score=242.56  Aligned_cols=168  Identities=21%  Similarity=0.251  Sum_probs=142.3

Q ss_pred             CCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech----hhhHHHHHHHHHHHHHHhccCCCCcceEEEceee
Q 024661           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (264)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~  162 (264)
                      ...+.++|++.+.||+|+||.||+|.+..+++.||+|+++..    ......+.+|+.+++.+.|+|+     +++++++
T Consensus         7 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~   81 (311)
T 3ork_A            7 PSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAI-----VAVYDTG   81 (311)
T ss_dssp             CSEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTB-----CCEEEEE
T ss_pred             cceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCc-----ceEEEee
Confidence            356778999999999999999999999999999999999753    2334577889999988888877     9999988


Q ss_pred             eeCC----EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEecc
Q 024661          163 DYRN----HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  237 (264)
Q Consensus       163 ~~~~----~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~D  237 (264)
                      ....    ..|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|
T Consensus        82 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~D  159 (311)
T 3ork_A           82 EAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMD  159 (311)
T ss_dssp             EEEETTEEEEEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECC
T ss_pred             eccCCCCcccEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEee
Confidence            7643    459999999 899999998765  799999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcCCC---------CcccceeeeeceeEe
Q 024661          238 YKVPSPRHA---------FSFQTFLSMASRVYI  261 (264)
Q Consensus       238 fg~a~~~~~---------~~~~~~~y~ape~~~  261 (264)
                      ||++.....         ...+|..|+|||++.
T Consensus       160 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  192 (311)
T 3ork_A          160 FGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR  192 (311)
T ss_dssp             CSCC------------------CCTTCCHHHHH
T ss_pred             ccCcccccccccccccccccCcCcccCCHHHhc
Confidence            999975332         224788999999864

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=2.2e-34  Score=252.94  Aligned_cols=167  Identities=26%  Similarity=0.332  Sum_probs=149.4

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeee
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~  163 (264)
                      ....++|.+.+.||+|+||.||+|.+..+|+.||+|++.+..    .....+.+|+.+++.++|+|+     +++++++.
T Consensus        12 ~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnI-----v~l~~~~~   86 (476)
T 2y94_A           12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHI-----IKLYQVIS   86 (476)
T ss_dssp             CCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTB-----CCEEEEEE
T ss_pred             CceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCC-----CcEEEEEE
Confidence            345578999999999999999999999999999999997543    234678899999999998887     99999999


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                      +.+.+|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus        87 ~~~~~~lv~E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~  164 (476)
T 2y94_A           87 TPSDIFMVMEYVSGGELFDYICKNG--RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSN  164 (476)
T ss_dssp             CSSEEEEEEECCSSEEHHHHTTSSS--SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred             ECCEEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchh
Confidence            999999999999 999999998654  79999999999999999999999999999999999999999999999999997


Q ss_pred             cCCC-----CcccceeeeeceeEe
Q 024661          243 PRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       243 ~~~~-----~~~~~~~y~ape~~~  261 (264)
                      ....     ..++|..|+|||++.
T Consensus       165 ~~~~~~~~~~~~gt~~y~aPE~~~  188 (476)
T 2y94_A          165 MMSDGEFLRTSCGSPNYAAPEVIS  188 (476)
T ss_dssp             ECCTTCCBCCCCSCSTTCCHHHHT
T ss_pred             hccccccccccCCCcCeEChhhcc
Confidence            6432     346889999999864

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=3.5e-34  Score=240.64  Aligned_cols=168  Identities=21%  Similarity=0.245  Sum_probs=144.5

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCc---EEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceee
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKE---LVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~  162 (264)
                      +...++|++.+.||+|+||.||+|.+..+++   .||+|+++..  ....+.+.+|+.+++.++|+|+     +++++++
T Consensus        45 ~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~  119 (325)
T 3kul_A           45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNI-----IRLEGVV  119 (325)
T ss_dssp             BCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEE
T ss_pred             ccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCC-----CcEEEEE
Confidence            3455789999999999999999999986654   4999999753  3456778999999999998887     9999999


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCC
Q 024661          163 DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVP  241 (264)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a  241 (264)
                      .+.+..|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus       120 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a  198 (325)
T 3kul_A          120 TRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLS  198 (325)
T ss_dssp             CGGGCCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSC
T ss_pred             EeCCccEEEeeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcc
Confidence            9999999999999 889999997653 46999999999999999999999999999999999999999999999999999


Q ss_pred             CcCCCC---------cccceeeeeceeEe
Q 024661          242 SPRHAF---------SFQTFLSMASRVYI  261 (264)
Q Consensus       242 ~~~~~~---------~~~~~~y~ape~~~  261 (264)
                      ......         ..+|..|+|||++.
T Consensus       199 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~  227 (325)
T 3kul_A          199 RVLEDDPDAAYTTTGGKIPIRWTAPEAIA  227 (325)
T ss_dssp             EECC----CCEECC---CCGGGSCHHHHH
T ss_pred             cccccCccceeeccCCCCcccccCHhHhc
Confidence            764321         12355699999764

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=2e-34  Score=239.18  Aligned_cols=163  Identities=21%  Similarity=0.398  Sum_probs=139.3

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh---------------------------hHHHHHHHHHHHH
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---------------------------YREAAMIEIDVLQ  143 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------------------------~~~~~~~e~~~l~  143 (264)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++.....                           ..+.+.+|+++++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            3679999999999999999999999999999999875321                           1246788999999


Q ss_pred             HHhccCCCCcceEEEceeeee--CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 024661          144 RLARHDIGGTRCVQIRNWFDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL  220 (264)
Q Consensus       144 ~l~~~~~~~~~~~~~~~~~~~--~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~di  220 (264)
                      .++|+|+     +++++++.+  ...+|+||||+ +++|.+++..   ..+++..++.++.||+.||+|||++||+||||
T Consensus        92 ~l~h~~i-----v~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dl  163 (298)
T 2zv2_A           92 KLDHPNV-----VKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDI  163 (298)
T ss_dssp             TCCCTTB-----CCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             hCCCCCC-----CeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence            9998887     999999887  67899999999 8888876443   36999999999999999999999999999999


Q ss_pred             CCCCEEeecCCcEEeccCCCCCcCCC------CcccceeeeeceeEe
Q 024661          221 KPENILLVSAEYVKVPDYKVPSPRHA------FSFQTFLSMASRVYI  261 (264)
Q Consensus       221 kp~Nili~~~~~v~l~Dfg~a~~~~~------~~~~~~~y~ape~~~  261 (264)
                      ||+|||++.++.+||+|||++.....      ...+|..|+|||++.
T Consensus       164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~  210 (298)
T 2zv2_A          164 KPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLS  210 (298)
T ss_dssp             CGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCC
T ss_pred             CHHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhc
Confidence            99999999999999999999976432      335889999999875

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=5.8e-34  Score=238.57  Aligned_cols=169  Identities=20%  Similarity=0.295  Sum_probs=146.4

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      ....++|++.+.||+|+||.||+|.+..+++.||+|+++...  ...+.+.+|+++++.++|+|+     +++++++...
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~   79 (319)
T 4euu_A            5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNI-----VKLFAIEEET   79 (319)
T ss_dssp             ECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTB-----CCEEEEEECT
T ss_pred             cCCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCc-----ceEEEEeecC
Confidence            456688999999999999999999999999999999997533  335677899999999998887     9999988775


Q ss_pred             C--EEEEEEecC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEe----ecCCcEEecc
Q 024661          166 N--HICIVFEKL-GPSLYDFLRKNS-YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL----VSAEYVKVPD  237 (264)
Q Consensus       166 ~--~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili----~~~~~v~l~D  237 (264)
                      .  ..|+||||+ +++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||+    +.++.+||+|
T Consensus        80 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~D  159 (319)
T 4euu_A           80 TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTD  159 (319)
T ss_dssp             TTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECC
T ss_pred             CCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEcc
Confidence            5  889999999 899999998653 2249999999999999999999999999999999999999    6677899999


Q ss_pred             CCCCCcCCC-----CcccceeeeeceeEe
Q 024661          238 YKVPSPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       238 fg~a~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      ||++.....     ...+|..|+|||++.
T Consensus       160 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~  188 (319)
T 4euu_A          160 FGAARELEDDEQFVSLYGTEEYLHPDMYE  188 (319)
T ss_dssp             CTTCEECCTTCCBCCCCSCGGGCCHHHHH
T ss_pred             CCCceecCCCCceeecccCCCccCHHHhh
Confidence            999976433     235788999999864

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=2e-34  Score=252.08  Aligned_cols=165  Identities=22%  Similarity=0.342  Sum_probs=139.2

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|++.+..    .....+.+|+.+++.+.|+|+     +++++++.+.
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~l~~~~~~~  220 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL-----TALKYSFQTH  220 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTS-----CCEEEEEEET
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeE-----eeEEEEEeeC
Confidence            3467999999999999999999999999999999997532    233566778888888888877     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      +.+|+||||+ +++|.+++....  .+++..++.++.||+.||+|||+ +||+||||||+|||++.++.+||+|||+|..
T Consensus       221 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~  298 (446)
T 4ejn_A          221 DRLCFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE  298 (446)
T ss_dssp             TEEEEEECCCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCT
T ss_pred             CEEEEEEeeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCcee
Confidence            9999999999 899999998765  79999999999999999999998 9999999999999999999999999999975


Q ss_pred             CC------CCcccceeeeeceeEe
Q 024661          244 RH------AFSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~------~~~~~~~~y~ape~~~  261 (264)
                      ..      ....||..|||||++.
T Consensus       299 ~~~~~~~~~~~~gt~~y~aPE~~~  322 (446)
T 4ejn_A          299 GIKDGATMKTFCGTPEYLAPEVLE  322 (446)
T ss_dssp             TCC-----CCSSSCGGGCCHHHHH
T ss_pred             ccCCCcccccccCCccccCHhhcC
Confidence            32      2345899999999864

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=7.9e-34  Score=243.66  Aligned_cols=167  Identities=23%  Similarity=0.388  Sum_probs=147.0

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      .+.++|++.+.||+|+||.||+|.+..+++.+|+|++... ......+.+|+.+++.++|+|+     +++++++.+.+.
T Consensus        48 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnI-----v~~~~~~~~~~~  122 (387)
T 1kob_A           48 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL-----INLHDAFEDKYE  122 (387)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTB-----CCEEEEEECSSE
T ss_pred             ccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCC-----CeEEEEEEeCCE
Confidence            3457899999999999999999999999999999999754 2345678899999999998887     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec--CCcEEeccCCCCCcC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS--AEYVKVPDYKVPSPR  244 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~--~~~v~l~Dfg~a~~~  244 (264)
                      +|+||||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.  ++.+||+|||++...
T Consensus       123 ~~lv~E~~~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~  201 (387)
T 1kob_A          123 MVLILEFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL  201 (387)
T ss_dssp             EEEEEECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred             EEEEEEcCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceec
Confidence            99999999 899999987543 46999999999999999999999999999999999999984  468999999999865


Q ss_pred             CCC-----cccceeeeeceeEe
Q 024661          245 HAF-----SFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~~~-----~~~~~~y~ape~~~  261 (264)
                      ...     ..+|..|+|||++.
T Consensus       202 ~~~~~~~~~~gt~~y~aPE~~~  223 (387)
T 1kob_A          202 NPDEIVKVTTATAEFAAPEIVD  223 (387)
T ss_dssp             CTTSCEEEECSSGGGCCHHHHT
T ss_pred             CCCcceeeeccCCCccCchhcc
Confidence            432     35788999999864

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.8e-34  Score=244.31  Aligned_cols=166  Identities=22%  Similarity=0.356  Sum_probs=140.1

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||+|++...   ....+.+.+|+.+++.++|+|+     +++++++...
T Consensus        22 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI-----v~l~~~~~~~   96 (367)
T 1cm8_A           22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV-----IGLLDVFTPD   96 (367)
T ss_dssp             CCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTB-----CCCSEEECSC
T ss_pred             eecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCC-----CCceeeEecC
Confidence            3457899999999999999999999999999999998542   3445678899999999999888     9999988765


Q ss_pred             ------CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          166 ------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       166 ------~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                            ..+|+|||+++++|.+++...   .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus        97 ~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg  173 (367)
T 1cm8_A           97 ETLDDFTDFYLVMPFMGTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFG  173 (367)
T ss_dssp             SSTTTCCCCEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred             CccccCceEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeee
Confidence                  356999999999999999874   59999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCC---CcccceeeeeceeEee
Q 024661          240 VPSPRHA---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       240 ~a~~~~~---~~~~~~~y~ape~~~~  262 (264)
                      +++....   ...+|..|+|||++.+
T Consensus       174 ~a~~~~~~~~~~~~t~~y~aPE~~~~  199 (367)
T 1cm8_A          174 LARQADSEMTGYVVTRWYRAPEVILN  199 (367)
T ss_dssp             TCEECCSSCCSSCSCGGGCCTHHHHT
T ss_pred             cccccccccCcCcCCCCcCCHHHHhC
Confidence            9976433   3357889999998653

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=7.6e-34  Score=259.44  Aligned_cols=165  Identities=21%  Similarity=0.270  Sum_probs=144.4

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHh-ccCCCCcceEEEceeeee
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~  164 (264)
                      ..++|++++.||+|+||.||+|.++.+++.||+|++++..    ...+.+..|..++..+. |++     ++.+++++++
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~-----i~~l~~~~~~  413 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPF-----LTQLHSCFQT  413 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTT-----BCCEEEECBC
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCe-----EEEEEEEEEe
Confidence            3467999999999999999999999999999999998532    33456777888888764 444     4999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      .+.+||||||+ +++|.+++....  .+++..++.|+.||+.||+|||++||+||||||+||||+.++++||+|||+|+.
T Consensus       414 ~~~~~lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~  491 (674)
T 3pfq_A          414 MDRLYFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE  491 (674)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred             CCEEEEEEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeec
Confidence            99999999999 999999999865  799999999999999999999999999999999999999999999999999975


Q ss_pred             C------CCCcccceeeeeceeEe
Q 024661          244 R------HAFSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~------~~~~~~~~~y~ape~~~  261 (264)
                      .      ....+||..|||||++.
T Consensus       492 ~~~~~~~~~~~~GT~~Y~APE~l~  515 (674)
T 3pfq_A          492 NIWDGVTTKTFCGTPDYIAPEIIA  515 (674)
T ss_dssp             CCCTTCCBCCCCSCSSSCCHHHHT
T ss_pred             cccCCcccccccCCCcccCHhhhc
Confidence            2      12346899999999865

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=2.7e-34  Score=237.29  Aligned_cols=163  Identities=26%  Similarity=0.436  Sum_probs=142.0

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ++|++.+.||+|+||.||+|.+ .+++.+|+|++....   ...+.+.+|+.+++.++|+|+     +++++++.+.+.+
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~   75 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI-----VKLYDVIHTKKRL   75 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTB-----CCEEEEEECSSCE
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCE-----eeeeeEEccCCeE
Confidence            5799999999999999999998 678899999986432   234678899999999998887     9999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC---
Q 024661          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH---  245 (264)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~---  245 (264)
                      |+|||++.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....   
T Consensus        76 ~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  154 (288)
T 1ob3_A           76 VLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV  154 (288)
T ss_dssp             EEEEECCSEEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred             EEEEEecCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence            9999999779999998653 469999999999999999999999999999999999999999999999999986432   


Q ss_pred             ---CCcccceeeeeceeEe
Q 024661          246 ---AFSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ---~~~~~~~~y~ape~~~  261 (264)
                         ....+|..|+|||++.
T Consensus       155 ~~~~~~~~t~~y~aPE~~~  173 (288)
T 1ob3_A          155 RKYTHEIVTLWYRAPDVLM  173 (288)
T ss_dssp             -------CCCTTCCHHHHT
T ss_pred             cccccccccccccCchhee
Confidence               2335788999999864

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=2.5e-33  Score=235.47  Aligned_cols=162  Identities=25%  Similarity=0.431  Sum_probs=129.6

Q ss_pred             CCeEEE---eecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHh-ccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRIL---SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~---~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++.   +.||+|+||.||+|.+..+++.||+|++.+.  ......+|+.+++.+. |+|+     +++++++.+...
T Consensus         8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~ni-----v~~~~~~~~~~~   80 (325)
T 3kn6_A            8 QHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNI-----VKLHEVFHDQLH   80 (325)
T ss_dssp             HHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTB-----CCEEEEEECSSE
T ss_pred             hccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCe-----eEEEEEEEcCCE
Confidence            567775   7899999999999999999999999999753  3456778999999997 7777     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC---cEEeccCCCCCc
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE---YVKVPDYKVPSP  243 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~---~v~l~Dfg~a~~  243 (264)
                      .|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++   .+||+|||++..
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~  158 (325)
T 3kn6_A           81 TFLVMELLNGGELFERIKKKK--HFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL  158 (325)
T ss_dssp             EEEEECCCCSCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEE
T ss_pred             EEEEEEccCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEecccccee
Confidence            99999999 889999998865  799999999999999999999999999999999999998766   899999999975


Q ss_pred             CCC------CcccceeeeeceeEee
Q 024661          244 RHA------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       244 ~~~------~~~~~~~y~ape~~~~  262 (264)
                      ...      ...+|..|+|||++.+
T Consensus       159 ~~~~~~~~~~~~~t~~y~aPE~~~~  183 (325)
T 3kn6_A          159 KPPDNQPLKTPCFTLHYAAPELLNQ  183 (325)
T ss_dssp             CCC----------------------
T ss_pred             cCCCCCcccccCCCcCccCHHHhcC
Confidence            332      3357889999998754

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=1e-33  Score=241.30  Aligned_cols=171  Identities=18%  Similarity=0.237  Sum_probs=138.4

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCC-----CcEEEEEEEechhhhHHHHHHHHHHHHHHhc----------cCCCC
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEK-----KELVAIKIVRSINKYREAAMIEIDVLQRLAR----------HDIGG  152 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~----------~~~~~  152 (264)
                      +...++|++.+.||+|+||.||+|.+..+     ++.||+|++....   ..+.+|+++++.+.+          ..+.|
T Consensus        31 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h  107 (364)
T 3op5_A           31 DMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDN---GPLFTELKFYQRAAKPEQIQKWIRTRKLKY  107 (364)
T ss_dssp             CTTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTC---HHHHHHHHHHHHHCCHHHHHHHHHHTTCSC
T ss_pred             ccCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccc---hhHHHHHHHHHhhhhhHHHHHHHHHhhccC
Confidence            35556899999999999999999998765     5789999987543   234455555555543          34455


Q ss_pred             cceEEEceeeeeC----CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEee
Q 024661          153 TRCVQIRNWFDYR----NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV  228 (264)
Q Consensus       153 ~~~~~~~~~~~~~----~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~  228 (264)
                      ++++++++++...    ...|+||||++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus       108 ~~iv~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~  186 (364)
T 3op5_A          108 LGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANA-KRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLN  186 (364)
T ss_dssp             CCSCCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEE
T ss_pred             CCCCeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEe
Confidence            6669999998774    5689999999999999998753 4799999999999999999999999999999999999999


Q ss_pred             --cCCcEEeccCCCCCcCCC-------------CcccceeeeeceeEee
Q 024661          229 --SAEYVKVPDYKVPSPRHA-------------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       229 --~~~~v~l~Dfg~a~~~~~-------------~~~~~~~y~ape~~~~  262 (264)
                        .++.+||+|||+++....             ...+|..|||||++.+
T Consensus       187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  235 (364)
T 3op5_A          187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNG  235 (364)
T ss_dssp             SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTT
T ss_pred             cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCC
Confidence              889999999999964321             2238889999998654

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=8.7e-34  Score=239.79  Aligned_cols=163  Identities=23%  Similarity=0.391  Sum_probs=141.9

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeCCE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      .+.++|++.+.||+|+||.||+|.++.+++.||+|++.+...   ...+|++++.++ .|+|+     +++++++.+.+.
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~i-----v~~~~~~~~~~~   90 (342)
T 2qr7_A           19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNI-----ITLKDVYDDGKY   90 (342)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTB-----CCEEEEEECSSE
T ss_pred             CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCc-----CeEEEEEEcCCE
Confidence            456789999999999999999999999999999999976443   234688888888 57777     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC----CcEEeccCCCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA----EYVKVPDYKVPS  242 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~----~~v~l~Dfg~a~  242 (264)
                      +|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||+..+    +.+||+|||++.
T Consensus        91 ~~lv~E~~~gg~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~  168 (342)
T 2qr7_A           91 VYVVTELMKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK  168 (342)
T ss_dssp             EEEEECCCCSCBHHHHHHTCT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred             EEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence            99999999 899999998765  79999999999999999999999999999999999998543    359999999997


Q ss_pred             cCCC------CcccceeeeeceeEe
Q 024661          243 PRHA------FSFQTFLSMASRVYI  261 (264)
Q Consensus       243 ~~~~------~~~~~~~y~ape~~~  261 (264)
                      ....      ..++|..|||||++.
T Consensus       169 ~~~~~~~~~~~~~gt~~y~aPE~~~  193 (342)
T 2qr7_A          169 QLRAENGLLMTPCYTANFVAPEVLE  193 (342)
T ss_dssp             ECBCTTCCBCCSSCCSSCCCHHHHH
T ss_pred             cCcCCCCceeccCCCccccCHHHhc
Confidence            5322      335788999999864

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=2.5e-33  Score=234.21  Aligned_cols=167  Identities=23%  Similarity=0.398  Sum_probs=144.1

Q ss_pred             CccCCCeEEE-eecccCccEEEEEEEeCCCCcEEEEEEEechh-hhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeee
Q 024661           88 ENLTPRYRIL-SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        88 ~~~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~  164 (264)
                      ..+.++|++. +.||+|+||.||+|.+..+++.||+|++.... ...+.+.+|+++++++ .|+|+     +++++++.+
T Consensus         8 ~~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i-----~~~~~~~~~   82 (316)
T 2ac3_A            8 GRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNV-----LELIEFFEE   82 (316)
T ss_dssp             CCTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTB-----CCEEEEEEE
T ss_pred             cccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCe-----eeEEEEEee
Confidence            3566889995 78999999999999999999999999997543 3456788999999985 57776     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCc---EEeccCCC
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY---VKVPDYKV  240 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~---v~l~Dfg~  240 (264)
                      .+.+|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.   +||+|||+
T Consensus        83 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~  160 (316)
T 2ac3_A           83 EDRFYLVFEKMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDL  160 (316)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTC
T ss_pred             CCEEEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccC
Confidence            99999999999 899999998765  7999999999999999999999999999999999999998775   99999999


Q ss_pred             CCcCCC-------------CcccceeeeeceeEe
Q 024661          241 PSPRHA-------------FSFQTFLSMASRVYI  261 (264)
Q Consensus       241 a~~~~~-------------~~~~~~~y~ape~~~  261 (264)
                      +.....             ...+|..|+|||++.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  194 (316)
T 2ac3_A          161 GSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE  194 (316)
T ss_dssp             CC-------------------CCSGGGCCHHHHH
T ss_pred             ccccccCCccccccccccccccCCcCccChHHhh
Confidence            875321             224788999999864

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.5e-33  Score=235.13  Aligned_cols=164  Identities=27%  Similarity=0.443  Sum_probs=141.7

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++...   ....+.+.+|+.+++.++|+|+     +++++++.+.+.
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~   76 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNL-----VNLLEVFRRKRR   76 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTB-----CCEEEEEEETTE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCc-----cchhheeecCCe
Confidence            36799999999999999999999999999999988643   2345677889999999999887     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC-
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH-  245 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~-  245 (264)
                      .++||||+ +++|.+++....  .+++..++.++.|++.||.|||++||+|+||||+|||++.++.++|+|||++.... 
T Consensus        77 ~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  154 (311)
T 4agu_A           77 LHLVFEYCDHTVLHELDRYQR--GVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTG  154 (311)
T ss_dssp             EEEEEECCSEEHHHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred             EEEEEEeCCCchHHHHHhhhc--CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence            99999999 777888777654  69999999999999999999999999999999999999999999999999997543 


Q ss_pred             -----CCcccceeeeeceeEe
Q 024661          246 -----AFSFQTFLSMASRVYI  261 (264)
Q Consensus       246 -----~~~~~~~~y~ape~~~  261 (264)
                           ....+|..|+|||++.
T Consensus       155 ~~~~~~~~~~~~~y~aPE~~~  175 (311)
T 4agu_A          155 PSDYYDDEVATRWYRSPELLV  175 (311)
T ss_dssp             -----------GGGCCHHHHH
T ss_pred             cccccCCCcCCccccChHHHh
Confidence                 2335788899999864

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=3.2e-33  Score=230.13  Aligned_cols=167  Identities=22%  Similarity=0.342  Sum_probs=148.0

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ..+.++|++.+.||+|+||.||+|.+..+++.||+|++....   ...+.+.+|+.+++.++|+|+     +++++++.+
T Consensus         2 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~   76 (284)
T 3kk8_A            2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI-----VRLHDSIQE   76 (284)
T ss_dssp             CTTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEEEC
T ss_pred             chhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCc-----CeEEEEEEc
Confidence            457789999999999999999999999999999999997533   345677899999999998887     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCc---EEeccCCC
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY---VKVPDYKV  240 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~---v~l~Dfg~  240 (264)
                      .+..|+||||+ +++|.+++....  .+++..++.++.|++.||.|||++||+||||||+||+++.++.   +||+|||+
T Consensus        77 ~~~~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~  154 (284)
T 3kk8_A           77 ESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL  154 (284)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred             CCEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeecee
Confidence            99999999999 889999988765  7999999999999999999999999999999999999987655   99999999


Q ss_pred             CCcCCC-----CcccceeeeeceeEe
Q 024661          241 PSPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       241 a~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      +.....     ...++..|+|||++.
T Consensus       155 ~~~~~~~~~~~~~~~~~~y~aPE~~~  180 (284)
T 3kk8_A          155 AIEVNDSEAWHGFAGTPGYLSPEVLK  180 (284)
T ss_dssp             CEECCSSCBCCCSCSCGGGCCHHHHT
T ss_pred             eEEcccCccccCCCCCcCCcCchhhc
Confidence            965432     235788999999864

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=4.1e-33  Score=235.79  Aligned_cols=166  Identities=25%  Similarity=0.345  Sum_probs=142.6

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      ...++|++.+.||+|+||.||+|.+. +++.||+|++...   ....+.+.+|+.+++.+.|++   ++++++++++.+.
T Consensus         6 ~~~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~---~~iv~~~~~~~~~   81 (343)
T 3dbq_A            6 VKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS---DKIIRLYDYEITD   81 (343)
T ss_dssp             SSSCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTC---TTBCCEEEEEECS
T ss_pred             eecCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcC---CceEEEeeeEeeC
Confidence            44577999999999999999999984 5888999998743   334567889999999998721   3449999999999


Q ss_pred             CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          166 NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       166 ~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      +.+|+|||+.+++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||++....
T Consensus        82 ~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~  158 (343)
T 3dbq_A           82 QYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ  158 (343)
T ss_dssp             SEEEEEECCCSEEHHHHHHHSC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred             CEEEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence            9999999977999999999865  799999999999999999999999999999999999997 6889999999997643


Q ss_pred             C--------CcccceeeeeceeEe
Q 024661          246 A--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ~--------~~~~~~~y~ape~~~  261 (264)
                      .        ...+|..|+|||++.
T Consensus       159 ~~~~~~~~~~~~gt~~y~aPE~~~  182 (343)
T 3dbq_A          159 PDTTSVVKDSQVGTVNYMPPEAIK  182 (343)
T ss_dssp             -----------CCCCSSCCHHHHH
T ss_pred             cccccccCCCCcCCcCcCCHHHHh
Confidence            2        335899999999874

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=9.4e-34  Score=233.74  Aligned_cols=169  Identities=20%  Similarity=0.240  Sum_probs=151.5

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      +...++|++.+.||+|+||.||+|.+..++..||+|++.......+.+.+|+.+++.++|+|+     +++++++.+.+.
T Consensus         9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~   83 (288)
T 3kfa_A            9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNL-----VQLLGVCTREPP   83 (288)
T ss_dssp             BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTB-----CCEEEEECSSSS
T ss_pred             cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEccCCC
Confidence            345578999999999999999999999999999999998777777889999999999998887     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      .|+|||++ +++|.+++.......+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.....
T Consensus        84 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~  163 (288)
T 3kfa_A           84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG  163 (288)
T ss_dssp             EEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred             EEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence            99999999 89999999986656799999999999999999999999999999999999999999999999999976543


Q ss_pred             Cc-------ccceeeeeceeEe
Q 024661          247 FS-------FQTFLSMASRVYI  261 (264)
Q Consensus       247 ~~-------~~~~~y~ape~~~  261 (264)
                      ..       .++..|+|||++.
T Consensus       164 ~~~~~~~~~~~~~~y~aPE~~~  185 (288)
T 3kfa_A          164 DTYTAHAGAKFPIKWTAPESLA  185 (288)
T ss_dssp             SSSEEETTEEECGGGCCHHHHH
T ss_pred             CccccccCCccccCcCChhhhc
Confidence            22       2455699999764

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=2.1e-33  Score=232.70  Aligned_cols=169  Identities=24%  Similarity=0.291  Sum_probs=146.0

Q ss_pred             CCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeC
Q 024661           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~  165 (264)
                      ++.+.++|++.+.||+|+||.||+|.+..+++.||+|++.... ..+.+.+|+.+++.+ .|+++     +.+++++.+.
T Consensus         5 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i-----~~~~~~~~~~   78 (298)
T 1csn_A            5 NNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGI-----PNVYYFGQEG   78 (298)
T ss_dssp             -CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTC-----CCEEEEEEET
T ss_pred             CcccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCC-----CeEEeecCCC
Confidence            4567789999999999999999999999999999999987432 334678899999999 56666     8888999999


Q ss_pred             CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCc-----EEeccCCC
Q 024661          166 NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY-----VKVPDYKV  240 (264)
Q Consensus       166 ~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~-----v~l~Dfg~  240 (264)
                      ...|+|||+++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.     +||+|||+
T Consensus        79 ~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~  157 (298)
T 1csn_A           79 LHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM  157 (298)
T ss_dssp             TEEEEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTT
T ss_pred             ceeEEEEEecCCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcc
Confidence            9999999999999999998754 35999999999999999999999999999999999999987776     99999999


Q ss_pred             CCcCCC-------------CcccceeeeeceeEee
Q 024661          241 PSPRHA-------------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       241 a~~~~~-------------~~~~~~~y~ape~~~~  262 (264)
                      +.....             ...+|..|+|||++.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  192 (298)
T 1csn_A          158 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLG  192 (298)
T ss_dssp             CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT
T ss_pred             ccccccccccccccccCccCCCCCcccCCchhhcC
Confidence            975322             2347889999998643

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.8e-33  Score=230.03  Aligned_cols=163  Identities=25%  Similarity=0.338  Sum_probs=144.7

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      ++|++.+.||+|+||.||+|.+. +++.||+|++.......+.+.+|+.+++.++|+|+     +++++++.+.+..|+|
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~~~lv   83 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKL-----VQLYGVCLEQAPICLV   83 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTB-----CCEEEEECSSSSEEEE
T ss_pred             hhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCE-----eeEEEEEecCCceEEE
Confidence            67999999999999999999986 46779999998766666789999999999998887     9999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC----
Q 024661          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA----  246 (264)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~----  246 (264)
                      |||+ +++|.+++.... ..+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.....    
T Consensus        84 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  162 (269)
T 4hcu_A           84 FEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT  162 (269)
T ss_dssp             EECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred             EEeCCCCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccccc
Confidence            9999 889999997654 4689999999999999999999999999999999999999999999999999975432    


Q ss_pred             ---CcccceeeeeceeEe
Q 024661          247 ---FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~  261 (264)
                         ...++..|+|||++.
T Consensus       163 ~~~~~~~~~~y~aPE~~~  180 (269)
T 4hcu_A          163 SSTGTKFPVKWASPEVFS  180 (269)
T ss_dssp             STTSTTCCGGGCCHHHHH
T ss_pred             cccCcccccccCCHHHhc
Confidence               234566799999764

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=1.3e-33  Score=236.62  Aligned_cols=167  Identities=24%  Similarity=0.462  Sum_probs=148.7

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh-------hHHHHHHHHHHHHHHhccCCCCcceEEEce
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~  160 (264)
                      ..+.++|++.+.||+|+||.||+|.+..+++.||+|++.....       ..+.+.+|+.+++.+.|+|+     +++++
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~   82 (321)
T 2a2a_A            8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV-----ITLHD   82 (321)
T ss_dssp             SCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTB-----CCEEE
T ss_pred             hhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCc-----ceEEE
Confidence            4556789999999999999999999999999999999875321       35678999999999999887     99999


Q ss_pred             eeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC----cEEe
Q 024661          161 WFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE----YVKV  235 (264)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~----~v~l  235 (264)
                      ++.+.+.+|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+|+||||+|||++.++    .++|
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl  160 (321)
T 2a2a_A           83 VYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKL  160 (321)
T ss_dssp             EEECSSEEEEEECCCCSCBHHHHHHTCS--CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEE
T ss_pred             EEecCCEEEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEE
Confidence            999999999999999 899999998754  799999999999999999999999999999999999999888    8999


Q ss_pred             ccCCCCCcCCC-----CcccceeeeeceeEe
Q 024661          236 PDYKVPSPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       236 ~Dfg~a~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      +|||++.....     ...+|..|+|||++.
T Consensus       161 ~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~  191 (321)
T 2a2a_A          161 IDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN  191 (321)
T ss_dssp             CCCTTCEECCTTCCCCCCCSCGGGCCHHHHT
T ss_pred             ccCccceecCccccccccCCCCCccCccccc
Confidence            99999975432     335788999999764

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=3.7e-34  Score=241.47  Aligned_cols=166  Identities=24%  Similarity=0.410  Sum_probs=146.8

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh---------hHHHHHHHHHHHHHHhccCCCCcceEEEc
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK---------YREAAMIEIDVLQRLARHDIGGTRCVQIR  159 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~e~~~l~~l~~~~~~~~~~~~~~  159 (264)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|+++....         ..+.+.+|+.+++.++|+|+     ++++
T Consensus        21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~I-----v~~~   95 (335)
T 3dls_A           21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI-----IKVL   95 (335)
T ss_dssp             HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTB-----CCEE
T ss_pred             ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCE-----eeEE
Confidence            455789999999999999999999999999999999975431         23456779999999998887     9999


Q ss_pred             eeeeeCCEEEEEEecC-CC-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEecc
Q 024661          160 NWFDYRNHICIVFEKL-GP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  237 (264)
Q Consensus       160 ~~~~~~~~~~lv~e~~-~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~D  237 (264)
                      +++.+.+.+++|||++ ++ +|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus        96 ~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~D  173 (335)
T 3dls_A           96 DIFENQGFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLID  173 (335)
T ss_dssp             EEEECSSEEEEEEECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECC
T ss_pred             EEEeeCCEEEEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEee
Confidence            9999999999999999 55 9999998765  799999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcCCC-----CcccceeeeeceeEe
Q 024661          238 YKVPSPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       238 fg~a~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      ||++.....     ...+|..|+|||++.
T Consensus       174 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~  202 (335)
T 3dls_A          174 FGSAAYLERGKLFYTFCGTIEYCAPEVLM  202 (335)
T ss_dssp             CTTCEECCTTCCBCEECSCGGGCCHHHHT
T ss_pred             cccceECCCCCceeccCCCccccChhhhc
Confidence            999976443     224788999999864

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=1.7e-33  Score=248.77  Aligned_cols=167  Identities=26%  Similarity=0.450  Sum_probs=148.5

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++.+..   .....+.+|+.+++.+.|+|+     +++++++.+.
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~~~~~~~   93 (486)
T 3mwu_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI-----MKLFEILEDS   93 (486)
T ss_dssp             HHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTB-----CCEEEEEECS
T ss_pred             ChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCc-----CeEEEEEEcC
Confidence            56688999999999999999999999999999999997432   345678899999999999888     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEee---cCCcEEeccCCCC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV---SAEYVKVPDYKVP  241 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~---~~~~v~l~Dfg~a  241 (264)
                      ..+|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||++
T Consensus        94 ~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a  171 (486)
T 3mwu_A           94 SSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS  171 (486)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCT
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcC
Confidence            9999999999 899999998765  799999999999999999999999999999999999995   4568999999999


Q ss_pred             CcCCC-----CcccceeeeeceeEee
Q 024661          242 SPRHA-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       242 ~~~~~-----~~~~~~~y~ape~~~~  262 (264)
                      .....     ...+|..|+|||++.+
T Consensus       172 ~~~~~~~~~~~~~gt~~y~aPE~~~~  197 (486)
T 3mwu_A          172 TCFQQNTKMKDRIGTAYYIAPEVLRG  197 (486)
T ss_dssp             TTBCCC----CCTTGGGGCCGGGGGS
T ss_pred             eECCCCCccCCCcCCCCCCCHHHhCC
Confidence            75432     3358999999998653

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=1.3e-33  Score=233.81  Aligned_cols=168  Identities=23%  Similarity=0.335  Sum_probs=142.8

Q ss_pred             CccCCCeEEEeecccCccEEEEEEE----eCCCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceee
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECF----DNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~  162 (264)
                      +...++|++.+.||+|+||.||+|+    +..+++.||+|++... ....+.+.+|+.+++.++|+|+     +++++++
T Consensus         6 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~   80 (295)
T 3ugc_A            6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI-----VKYKGVC   80 (295)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTB-----CCEEEEE
T ss_pred             cCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCE-----eeEEEEE
Confidence            4456789999999999999999998    5668899999998753 3445678899999999998887     9999988


Q ss_pred             ee--CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          163 DY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       163 ~~--~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                      ..  ...+++||||+ +++|.+++.... ..+++..++.++.|++.||.|||++||+||||||+|||++.++++||+|||
T Consensus        81 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg  159 (295)
T 3ugc_A           81 YSAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG  159 (295)
T ss_dssp             CHHHHTSCEEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred             ecCCCCceEEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCc
Confidence            55  45689999999 899999998754 359999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCC---------CcccceeeeeceeEe
Q 024661          240 VPSPRHA---------FSFQTFLSMASRVYI  261 (264)
Q Consensus       240 ~a~~~~~---------~~~~~~~y~ape~~~  261 (264)
                      ++.....         ...++..|+|||++.
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  190 (295)
T 3ugc_A          160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLT  190 (295)
T ss_dssp             SCC-------------CTTCGGGGCCHHHHH
T ss_pred             ccccccCCcceeeeccCCCCccceeCcHHhc
Confidence            9976432         223566799999764

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=1.3e-33  Score=235.52  Aligned_cols=168  Identities=23%  Similarity=0.263  Sum_probs=139.2

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      +...++|++.+.||+|+||.||+|.+  ++..||+|++...   ....+.+.+|+.+++.++|+|+     +++++++.+
T Consensus        33 ~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~  105 (309)
T 3p86_A           33 DIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI-----VLFMGAVTQ  105 (309)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEECS
T ss_pred             cCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEEE
Confidence            34557899999999999999999987  4788999998743   2345678899999999998887     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEeecCCcEEeccCCC
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSY-RSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKV  240 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dikp~Nili~~~~~v~l~Dfg~  240 (264)
                      .+.+|+||||+ +++|.+++..... ..+++..++.++.||+.||+|||++|  |+||||||+|||++.++.+||+|||+
T Consensus       106 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~  185 (309)
T 3p86_A          106 PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGL  185 (309)
T ss_dssp             TTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-
T ss_pred             CCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCC
Confidence            99999999999 8899999986431 13899999999999999999999999  99999999999999999999999999


Q ss_pred             CCcCCC------CcccceeeeeceeEee
Q 024661          241 PSPRHA------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       241 a~~~~~------~~~~~~~y~ape~~~~  262 (264)
                      +.....      ...+|..|+|||++.+
T Consensus       186 a~~~~~~~~~~~~~~gt~~y~aPE~~~~  213 (309)
T 3p86_A          186 SRLKASTFLSSKSAAGTPEWMAPEVLRD  213 (309)
T ss_dssp             ----------------CCTTSCHHHHTT
T ss_pred             CccccccccccccCCCCccccChhhhcC
Confidence            975332      3457889999998653

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=2.6e-33  Score=239.52  Aligned_cols=173  Identities=24%  Similarity=0.353  Sum_probs=142.5

Q ss_pred             ceEEeeCC---ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcc
Q 024661           81 HYVFAIGE---NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR  154 (264)
Q Consensus        81 ~~~~~~~~---~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~  154 (264)
                      .+.+..++   .+.++|++.+.||+|+||.||+|.+..+++.||+|++...   ....+.+.+|+.+++.+.|+|+    
T Consensus        11 ~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpni----   86 (371)
T 2xrw_A           11 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI----   86 (371)
T ss_dssp             EEEEEETTEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTB----
T ss_pred             ceEeecCCcccchhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCc----
Confidence            34455554   3557899999999999999999999999999999999753   3445678899999999999888    


Q ss_pred             eEEEceeeeeCC------EEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEee
Q 024661          155 CVQIRNWFDYRN------HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV  228 (264)
Q Consensus       155 ~~~~~~~~~~~~------~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~  228 (264)
                       +++++++...+      .+|+||||+.++|.+++..    .+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus        87 -v~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~  161 (371)
T 2xrw_A           87 -IGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK  161 (371)
T ss_dssp             -CCEEEEECSCCSTTTCCEEEEEEECCSEEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred             -cceEEeeccccccccccceEEEEEcCCCCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEc
Confidence             99999887654      8899999998899998863    589999999999999999999999999999999999999


Q ss_pred             cCCcEEeccCCCCCcCCC-----CcccceeeeeceeEee
Q 024661          229 SAEYVKVPDYKVPSPRHA-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       229 ~~~~v~l~Dfg~a~~~~~-----~~~~~~~y~ape~~~~  262 (264)
                      .++.+||+|||++.....     ...+|..|+|||++.+
T Consensus       162 ~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~  200 (371)
T 2xrw_A          162 SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG  200 (371)
T ss_dssp             TTSCEEECCCCC----------------CTTCCHHHHTT
T ss_pred             CCCCEEEEEeecccccccccccCCceecCCccCHHHhcC
Confidence            999999999999976443     2357889999998653

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.1e-33  Score=234.66  Aligned_cols=169  Identities=22%  Similarity=0.352  Sum_probs=146.8

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeee--
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDY--  164 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~--  164 (264)
                      ....++|++.+.||+|+||.||+|.+..+++.||+|++.......+.+.+|+.+++.+ .|+|+     +++++++..  
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i-----~~~~~~~~~~~   94 (326)
T 2x7f_A           20 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNI-----ATYYGAFIKKN   94 (326)
T ss_dssp             CCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTB-----CCEEEEEEECC
T ss_pred             cCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCe-----eeeeeEEeecc
Confidence            3566889999999999999999999999999999999986666667889999999999 67777     999999877  


Q ss_pred             ----CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          165 ----RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       165 ----~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                          .+.+|+||||+ +++|.+++.......+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||
T Consensus        95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg  174 (326)
T 2x7f_A           95 PPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFG  174 (326)
T ss_dssp             --CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCT
T ss_pred             CccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCc
Confidence                56899999999 7899999987644579999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCC------CcccceeeeeceeEe
Q 024661          240 VPSPRHA------FSFQTFLSMASRVYI  261 (264)
Q Consensus       240 ~a~~~~~------~~~~~~~y~ape~~~  261 (264)
                      ++.....      ...++..|+|||++.
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~  202 (326)
T 2x7f_A          175 VSAQLDRTVGRRNTFIGTPYWMAPEVIA  202 (326)
T ss_dssp             TTC-------------CCGGGCCHHHHC
T ss_pred             CceecCcCccccccccCCccccChhhhc
Confidence            9876432      235788999999875

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=5.2e-34  Score=251.91  Aligned_cols=169  Identities=25%  Similarity=0.446  Sum_probs=150.1

Q ss_pred             eCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech----hhhHHHHHHHHHHHHHHhccCCCCcceEEEcee
Q 024661           86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNW  161 (264)
Q Consensus        86 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~  161 (264)
                      ....+.++|++.+.||+|+||.||+|.+..+++.||+|++.+.    ....+.+.+|+.+++.+.|+|+     ++++++
T Consensus        20 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~~~   94 (484)
T 3nyv_A           20 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI-----MKLYEF   94 (484)
T ss_dssp             CCCCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTB-----CCEEEE
T ss_pred             CCCcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCC-----CcEEEE
Confidence            3456778899999999999999999999999999999998743    3346788999999999998887     999999


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEe---ecCCcEEecc
Q 024661          162 FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL---VSAEYVKVPD  237 (264)
Q Consensus       162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili---~~~~~v~l~D  237 (264)
                      +.+.+.+|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|
T Consensus        95 ~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~D  172 (484)
T 3nyv_A           95 FEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIID  172 (484)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHTCS--CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECC
T ss_pred             EEeCCEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEe
Confidence            99999999999999 999999998765  79999999999999999999999999999999999999   4678999999


Q ss_pred             CCCCCcCCCC-----cccceeeeeceeEe
Q 024661          238 YKVPSPRHAF-----SFQTFLSMASRVYI  261 (264)
Q Consensus       238 fg~a~~~~~~-----~~~~~~y~ape~~~  261 (264)
                      ||++......     ..+|..|+|||++.
T Consensus       173 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~  201 (484)
T 3nyv_A          173 FGLSTHFEASKKMKDKIGTAYYIAPEVLH  201 (484)
T ss_dssp             TTHHHHBCCCCSHHHHTTGGGTCCHHHHH
T ss_pred             eeeeEEcccccccccCCCCccccCceeec
Confidence            9998754432     35899999999864

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=9.3e-34  Score=250.77  Aligned_cols=167  Identities=19%  Similarity=0.234  Sum_probs=149.6

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      ..++|++.+.||+|+||.||+|.+..++..||+|+++......+.+.+|+.+++.++|+|+     +++++++.+.+.+|
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~l~~~~~~~~~~~  292 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNL-----VQLLGVCTREPPFY  292 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTB-----CCEEEEECSSSSCE
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCE-----eeEEEEEecCCcEE
Confidence            3467999999999999999999999999999999998766667889999999999999888     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC-
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF-  247 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~-  247 (264)
                      +||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..... 
T Consensus       293 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  372 (495)
T 1opk_A          293 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT  372 (495)
T ss_dssp             EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC
T ss_pred             EEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCc
Confidence            999999 899999998765557999999999999999999999999999999999999999999999999999764332 


Q ss_pred             ------cccceeeeeceeEe
Q 024661          248 ------SFQTFLSMASRVYI  261 (264)
Q Consensus       248 ------~~~~~~y~ape~~~  261 (264)
                            ..++..|+|||++.
T Consensus       373 ~~~~~~~~~~~~y~aPE~~~  392 (495)
T 1opk_A          373 YTAHAGAKFPIKWTAPESLA  392 (495)
T ss_dssp             EECCTTCCCCGGGCCHHHHH
T ss_pred             eeecCCCcCCcceeCHhHHh
Confidence                  22456799999754

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=3.9e-34  Score=240.75  Aligned_cols=167  Identities=26%  Similarity=0.483  Sum_probs=140.2

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      ...++|++.++||+|+||.||+|.+..+++.||+|+++...   ...+.+.+|+.+++.++|+|+     +++++++.+.
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~  105 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNI-----IELKSVIHHN  105 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTB-----CCEEEEEEET
T ss_pred             cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCc-----ceEEEEEecC
Confidence            44478999999999999999999999999999999987432   234566789999999998887     9999999999


Q ss_pred             CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEee-----cCCcEEeccCCC
Q 024661          166 NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV-----SAEYVKVPDYKV  240 (264)
Q Consensus       166 ~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~-----~~~~v~l~Dfg~  240 (264)
                      +.+|+||||+.++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++     .++.+||+|||+
T Consensus       106 ~~~~lv~e~~~~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~  183 (329)
T 3gbz_A          106 HRLHLIFEYAENDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGL  183 (329)
T ss_dssp             TEEEEEEECCSEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred             CEEEEEEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence            9999999999889999998876  699999999999999999999999999999999999995     445699999999


Q ss_pred             CCcCC------CCcccceeeeeceeEee
Q 024661          241 PSPRH------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       241 a~~~~------~~~~~~~~y~ape~~~~  262 (264)
                      +....      ....+|..|+|||++.+
T Consensus       184 a~~~~~~~~~~~~~~~t~~y~aPE~~~~  211 (329)
T 3gbz_A          184 ARAFGIPIRQFTHEIITLWYRPPEILLG  211 (329)
T ss_dssp             HHHHC-----------CCTTCCHHHHTT
T ss_pred             ccccCCcccccCCCcCCccccCHHHhcC
Confidence            86532      23356888999998753

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=1.7e-33  Score=238.78  Aligned_cols=166  Identities=23%  Similarity=0.398  Sum_probs=143.2

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee---
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY---  164 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~---  164 (264)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++....   .....+.+|+.+++.++|+|+     +++++++..   
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~   90 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV-----VNLIEICRTKAS   90 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTB-----CCEEEEEEEC--
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCc-----ccHhheeecccc
Confidence            368999999999999999999999999999999886432   334567889999999999888     889888877   


Q ss_pred             -----CCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          165 -----RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       165 -----~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                           .+.+|+||||+.++|.+.+.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||
T Consensus        91 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg  169 (351)
T 3mi9_A           91 PYNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFG  169 (351)
T ss_dssp             ------CEEEEEEECCSEEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred             ccccCCceEEEEEeccCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccch
Confidence                 45789999999889998887653 469999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCC----------CCcccceeeeeceeEee
Q 024661          240 VPSPRH----------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       240 ~a~~~~----------~~~~~~~~y~ape~~~~  262 (264)
                      ++....          ....+|..|+|||++.+
T Consensus       170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  202 (351)
T 3mi9_A          170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLG  202 (351)
T ss_dssp             TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTT
T ss_pred             hcccccccccccccccCCcccccCccCchhhcC
Confidence            986432          22356888999998643

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=6.9e-33  Score=227.51  Aligned_cols=165  Identities=18%  Similarity=0.324  Sum_probs=134.3

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh----hHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK----YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++.....    ..+.+.+|+.+++.++|+|+     +++++++.+.+.
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~   85 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSI-----LELYNYFEDSNY   85 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTB-----CCEEEEEECSSE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCe-----EeEEEEEccCCe
Confidence            569999999999999999999999999999999975432    24678899999999988887     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      .|+||||+ +++|.+++.... ..+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.....
T Consensus        86 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~  164 (278)
T 3cok_A           86 VYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM  164 (278)
T ss_dssp             EEEEEECCTTEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred             EEEEEecCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence            99999999 889999998653 4689999999999999999999999999999999999999999999999999976432


Q ss_pred             ------CcccceeeeeceeEee
Q 024661          247 ------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ------~~~~~~~y~ape~~~~  262 (264)
                            ...++..|+|||++.+
T Consensus       165 ~~~~~~~~~~~~~y~aPE~~~~  186 (278)
T 3cok_A          165 PHEKHYTLCGTPNYISPEIATR  186 (278)
T ss_dssp             ----------------------
T ss_pred             CCCcceeccCCCCcCCcchhcC
Confidence                  2357889999998753

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=5.9e-33  Score=238.15  Aligned_cols=168  Identities=18%  Similarity=0.264  Sum_probs=144.9

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCC-------CcEEEEEEEech--hhhHHHHHHHHHHHHHH-hccCCCCcceEEE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEK-------KELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQI  158 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~  158 (264)
                      ...++|.+.+.||+|+||.||+|.+..+       +..||+|+++..  ......+.+|+++++.+ +|+|+     +++
T Consensus        66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnI-----v~~  140 (382)
T 3tt0_A           66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNI-----INL  140 (382)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTB-----CCE
T ss_pred             cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchh-----hhh
Confidence            4457899999999999999999997543       357999998753  34457788999999999 88887     999


Q ss_pred             ceeeeeCCEEEEEEecC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 024661          159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSY--------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPE  223 (264)
Q Consensus       159 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~--------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~  223 (264)
                      ++++.+.+..|+||||+ +++|.+++.....              ..+++..++.++.||+.||.|||++||+||||||+
T Consensus       141 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~  220 (382)
T 3tt0_A          141 LGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR  220 (382)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred             eeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcc
Confidence            99999999999999999 8899999987541              35899999999999999999999999999999999


Q ss_pred             CEEeecCCcEEeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          224 NILLVSAEYVKVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       224 Nili~~~~~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      |||++.++.+||+|||++.....        ...+|..|+|||++.
T Consensus       221 NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~  266 (382)
T 3tt0_A          221 NVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF  266 (382)
T ss_dssp             GEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHH
T ss_pred             eEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhc
Confidence            99999999999999999975432        224567899999764

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=8.3e-33  Score=228.86  Aligned_cols=169  Identities=25%  Similarity=0.350  Sum_probs=150.0

Q ss_pred             eCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech----hhhHHHHHHHHHHHHHHhccCCCCcceEEEcee
Q 024661           86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNW  161 (264)
Q Consensus        86 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~  161 (264)
                      ......++|.+.+.||+|+||.||+|.+..+++.+|+|++...    ....+.+.+|+.+++.+.|+|+     ++++++
T Consensus         9 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~   83 (294)
T 2rku_A            9 VDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHV-----VGFHGF   83 (294)
T ss_dssp             EETTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTB-----CCEEEE
T ss_pred             eCCCcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCE-----eeeeee
Confidence            3446668899999999999999999999999999999998753    2455778889999999988887     999999


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCC
Q 024661          162 FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV  240 (264)
Q Consensus       162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~  240 (264)
                      +.+.+..|+||||+ +++|.+++....  .+++..++.++.|++.||+|||++||+|+||||+|||++.++.++|+|||+
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~  161 (294)
T 2rku_A           84 FEDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGL  161 (294)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             eccCCEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccC
Confidence            99999999999999 899999998765  799999999999999999999999999999999999999999999999999


Q ss_pred             CCcCC------CCcccceeeeeceeEe
Q 024661          241 PSPRH------AFSFQTFLSMASRVYI  261 (264)
Q Consensus       241 a~~~~------~~~~~~~~y~ape~~~  261 (264)
                      +....      ....++..|+|||++.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~y~aPE~~~  188 (294)
T 2rku_A          162 ATKVEYDGERKKVLCGTPNYIAPEVLS  188 (294)
T ss_dssp             CEECCSTTCCBCCCCSCCSSCCHHHHT
T ss_pred             ceecccCccccccccCCCCcCCcchhc
Confidence            97543      2235788899999764

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=5.3e-33  Score=228.83  Aligned_cols=170  Identities=23%  Similarity=0.307  Sum_probs=146.6

Q ss_pred             CCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHH-hccCCCCcceEEEceee
Q 024661           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWF  162 (264)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~  162 (264)
                      ...+.++|++.+.||+|+||.||+|.+..+++.||+|+++..   ......+.+|+..+..+ .|+|+     +++++++
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~i-----v~~~~~~   80 (289)
T 1x8b_A            6 KSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHV-----VRYFSAW   80 (289)
T ss_dssp             CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTB-----CCEEEEE
T ss_pred             cccccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCe-----eeeeeee
Confidence            345667899999999999999999999999999999998743   34456778899999988 78877     9999999


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC---------
Q 024661          163 DYRNHICIVFEKL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA---------  230 (264)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~---------  230 (264)
                      .+.+..|+||||+ +++|.+++....  ...+++..++.++.||+.||.|||++||+||||||+|||++.+         
T Consensus        81 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~  160 (289)
T 1x8b_A           81 AEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEE  160 (289)
T ss_dssp             EETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------
T ss_pred             ecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccc
Confidence            9999999999999 889999998642  1368999999999999999999999999999999999999844         


Q ss_pred             ----------CcEEeccCCCCCcCCC--CcccceeeeeceeEe
Q 024661          231 ----------EYVKVPDYKVPSPRHA--FSFQTFLSMASRVYI  261 (264)
Q Consensus       231 ----------~~v~l~Dfg~a~~~~~--~~~~~~~y~ape~~~  261 (264)
                                ..++|+|||++.....  ...+|..|+|||++.
T Consensus       161 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~  203 (289)
T 1x8b_A          161 GDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQ  203 (289)
T ss_dssp             ---------CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHT
T ss_pred             cccccccCCceEEEEcccccccccCCccccCCCccccChhHhc
Confidence                      4899999999976543  335889999999864

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=4.2e-34  Score=240.04  Aligned_cols=165  Identities=25%  Similarity=0.399  Sum_probs=140.3

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhh--HHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKY--REAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++......  ...+.+|+.+++.++|+|+     +++++++.+.+..|
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~   76 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI-----VTLHDIIHTEKSLT   76 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTB-----CCEEEEEECSSCEE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCC-----CeeeeEEeeCCEEE
Confidence            5799999999999999999999999999999998743321  1234579999999988887     99999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---
Q 024661          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---  246 (264)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---  246 (264)
                      +||||++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....   
T Consensus        77 lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~  155 (324)
T 3mtl_A           77 LVFEYLDKDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK  155 (324)
T ss_dssp             EEEECCSEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-----
T ss_pred             EEecccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcc
Confidence            999999889999998754 4699999999999999999999999999999999999999999999999999865332   


Q ss_pred             ---CcccceeeeeceeEee
Q 024661          247 ---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~~  262 (264)
                         ...+|..|+|||++.+
T Consensus       156 ~~~~~~~t~~y~aPE~~~~  174 (324)
T 3mtl_A          156 TYDNEVVTLWYRPPDILLG  174 (324)
T ss_dssp             -------CGGGCCHHHHTT
T ss_pred             ccccccCcccccChhhhcC
Confidence               2356888999998643

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=5.9e-33  Score=238.73  Aligned_cols=166  Identities=23%  Similarity=0.335  Sum_probs=142.5

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      ...+|++.+.||+|+||.||+|.+.. ++.||||++...   ....+.+.+|+.+++.+.|+   +++++++++++...+
T Consensus        54 ~~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~---~~~iv~~~~~~~~~~  129 (390)
T 2zmd_A           54 KGRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH---SDKIIRLYDYEITDQ  129 (390)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTT---CTTBCCEEEEEECSS
T ss_pred             cCCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccC---CCeEEEEEEEEecCC
Confidence            34569999999999999999999865 889999999743   34457789999999999862   134499999999999


Q ss_pred             EEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          167 HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       167 ~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      .+|+|||+.+++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||++.....
T Consensus       130 ~~~lv~E~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~  206 (390)
T 2zmd_A          130 YIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP  206 (390)
T ss_dssp             EEEEEEECCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred             EEEEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence            999999966999999998865  789999999999999999999999999999999999995 68999999999976432


Q ss_pred             --------CcccceeeeeceeEee
Q 024661          247 --------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 --------~~~~~~~y~ape~~~~  262 (264)
                              ...+|..|||||++.+
T Consensus       207 ~~~~~~~~~~~gt~~y~aPE~~~~  230 (390)
T 2zmd_A          207 DTTSVVKDSQVGAVNYMPPEAIKD  230 (390)
T ss_dssp             -------CCSCCCGGGCCHHHHHC
T ss_pred             CCccccCCCCCcCCCccChHHhhh
Confidence                    3358999999998753

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=3.9e-33  Score=233.89  Aligned_cols=161  Identities=22%  Similarity=0.321  Sum_probs=143.7

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      .|...+.||+|+||.||+|.+..+|+.||+|++.... ...+.+.+|+.+++.++|+|+     +++++++...+..|+|
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~~~lv  120 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNV-----VEMYKSYLVGEELWVL  120 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTB-----CCEEEEEEETTEEEEE
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCc-----ceEEEEEEECCEEEEE
Confidence            3888899999999999999999999999999997533 345678899999999998887     9999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC----
Q 024661          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA----  246 (264)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~----  246 (264)
                      |||+ +++|.+++...   .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....    
T Consensus       121 ~e~~~~~~L~~~l~~~---~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~  197 (321)
T 2c30_A          121 MEFLQGGALTDIVSQV---RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK  197 (321)
T ss_dssp             ECCCCSCBHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC
T ss_pred             EecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccc
Confidence            9999 89999998753   599999999999999999999999999999999999999999999999999865332    


Q ss_pred             --CcccceeeeeceeEe
Q 024661          247 --FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 --~~~~~~~y~ape~~~  261 (264)
                        ...+|..|+|||++.
T Consensus       198 ~~~~~gt~~y~aPE~~~  214 (321)
T 2c30_A          198 RKSLVGTPYWMAPEVIS  214 (321)
T ss_dssp             BCCCCSCGGGCCHHHHT
T ss_pred             cccccCCccccCHhhhc
Confidence              335888999999764

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=4.6e-33  Score=237.35  Aligned_cols=164  Identities=27%  Similarity=0.463  Sum_probs=144.5

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC--
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR--  165 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~--  165 (264)
                      +.++|++.+.||+|+||.||+|.+..+++.||+|++...  ....+.+.+|+.+++.++|+|+     +++++++...  
T Consensus        25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~   99 (364)
T 3qyz_A           25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI-----IGINDIIRAPTI   99 (364)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTB-----CCCCEEECCSST
T ss_pred             ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCC-----ccceeEEecCCc
Confidence            347899999999999999999999999999999998743  3445778899999999999888     8888888654  


Q ss_pred             ---CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          166 ---NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       166 ---~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                         ...|+|||+++++|.+++...   .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus       100 ~~~~~~~iv~e~~~~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~  176 (364)
T 3qyz_A          100 EQMKDVYIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR  176 (364)
T ss_dssp             TTCCCEEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             cccceEEEEEcccCcCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceE
Confidence               479999999988999999874   59999999999999999999999999999999999999999999999999997


Q ss_pred             cCCC---------CcccceeeeeceeEe
Q 024661          243 PRHA---------FSFQTFLSMASRVYI  261 (264)
Q Consensus       243 ~~~~---------~~~~~~~y~ape~~~  261 (264)
                      ....         ...+|..|+|||++.
T Consensus       177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~  204 (364)
T 3qyz_A          177 VADPDHDHTGFLTEYVATRWYRAPEIML  204 (364)
T ss_dssp             ECCGGGCBCCTTCCCCSCGGGCCHHHHH
T ss_pred             ecCCCCCccccccccccccCCCCCHHhc
Confidence            5432         236788999999753

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=2.6e-33  Score=230.56  Aligned_cols=165  Identities=21%  Similarity=0.275  Sum_probs=142.6

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      ..++|++.+.||+|+||.||+|.+. ++..||+|+++......+.+.+|+++++.++|+|+     +++++++.+.+..|
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~~~   95 (283)
T 3gen_A           22 DPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKL-----VQLYGVCTKQRPIF   95 (283)
T ss_dssp             CGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTB-----CCEEEEECSSSSEE
T ss_pred             CHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCE-----eeEEEEEecCCCeE
Confidence            3467999999999999999999876 56789999998766666788999999999998887     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC--
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA--  246 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~--  246 (264)
                      +||||+ +++|.+++.... ..+++..++.++.|++.||.|||++||+|+||||+|||++.++.++|+|||++.....  
T Consensus        96 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~  174 (283)
T 3gen_A           96 IITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE  174 (283)
T ss_dssp             EEECCCTTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH
T ss_pred             EEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccccc
Confidence            999999 899999998643 3699999999999999999999999999999999999999999999999999975432  


Q ss_pred             -----CcccceeeeeceeEe
Q 024661          247 -----FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 -----~~~~~~~y~ape~~~  261 (264)
                           ...++..|+|||++.
T Consensus       175 ~~~~~~~~~~~~y~aPE~~~  194 (283)
T 3gen_A          175 YTSSVGSKFPVRWSPPEVLM  194 (283)
T ss_dssp             HHSTTSTTSCGGGCCHHHHH
T ss_pred             cccccCCccCcccCCHHHhc
Confidence                 233566799999764

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=1.4e-33  Score=236.74  Aligned_cols=161  Identities=22%  Similarity=0.227  Sum_probs=141.2

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC----CE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR----NH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~----~~  167 (264)
                      ++|++.+.||+|+||.||+|++.  ++.||+|++...........+|+.+++.++|+|+     +++++++.+.    ..
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~~~~~~~~~~~~~   96 (322)
T 3soc_A           24 MPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENI-----LQFIGAEKRGTSVDVD   96 (322)
T ss_dssp             EEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTB-----CCEEEEEEEECSSSEE
T ss_pred             hhchhhheecccCceEEEEEEEC--CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCc-----hhhcceeccCCCCCce
Confidence            57999999999999999999876  7889999998766666667778888988888887     9999998874    35


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC----------CCeecCCCCCCEEeecCCcEEec
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL----------RLIHTDLKPENILLVSAEYVKVP  236 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~----------~ivH~dikp~Nili~~~~~v~l~  236 (264)
                      +|+||||+ +++|.+++...   .+++..++.++.||+.||.|||+.          ||+||||||+|||++.++.+||+
T Consensus        97 ~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~  173 (322)
T 3soc_A           97 LWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA  173 (322)
T ss_dssp             EEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEEC
T ss_pred             EEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEc
Confidence            89999999 88999999875   499999999999999999999999          99999999999999999999999


Q ss_pred             cCCCCCcCCC--------CcccceeeeeceeEee
Q 024661          237 DYKVPSPRHA--------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       237 Dfg~a~~~~~--------~~~~~~~y~ape~~~~  262 (264)
                      |||++.....        ...+|..|+|||++.+
T Consensus       174 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  207 (322)
T 3soc_A          174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEG  207 (322)
T ss_dssp             CCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTT
T ss_pred             cCCcccccccccCccccccCccCccccCHhhccc
Confidence            9999964221        2357899999998753

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=3.5e-33  Score=230.32  Aligned_cols=169  Identities=26%  Similarity=0.377  Sum_probs=145.5

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      -.+.++|.+.+.||+|+||.||+|.+..++..+|+|++....  ...+.+.+|+++++.++|+|+     +++++++.+.
T Consensus        18 g~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~~   92 (285)
T 3is5_A           18 GTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNI-----IKIFEVFEDY   92 (285)
T ss_dssp             SCHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTB-----CCEEEEEECS
T ss_pred             CChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchH-----HhHHHheecC
Confidence            356688999999999999999999999999999999987543  345778899999999998887     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEee---cCCcEEeccCC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV---SAEYVKVPDYK  239 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~---~~~~v~l~Dfg  239 (264)
                      ...|+||||+ +++|.+++...  ....+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||
T Consensus        93 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg  172 (285)
T 3is5_A           93 HNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFG  172 (285)
T ss_dssp             SEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCC
T ss_pred             CeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeee
Confidence            9999999999 88999998643  124799999999999999999999999999999999999994   55789999999


Q ss_pred             CCCcCCC-----CcccceeeeeceeEe
Q 024661          240 VPSPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       240 ~a~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      ++.....     ...++..|+|||++.
T Consensus       173 ~a~~~~~~~~~~~~~~t~~y~aPE~~~  199 (285)
T 3is5_A          173 LAELFKSDEHSTNAAGTALYMAPEVFK  199 (285)
T ss_dssp             CCCC----------CTTGGGCCHHHHT
T ss_pred             cceecCCcccCcCcccccCcCChHHhc
Confidence            9976332     335788999999753

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=2.8e-33  Score=230.01  Aligned_cols=165  Identities=22%  Similarity=0.336  Sum_probs=145.5

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|++....    .....+.+|+.+++.+.|+|+     +++++++.+.
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~   81 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-----LRLYGYFHDA   81 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTB-----CCEEEEEECS
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCC-----cchhheEecC
Confidence            3467999999999999999999999999999999987532    234678889999999998887     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      +..++||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+|+||||+|||++.++.++|+|||++...
T Consensus        82 ~~~~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~  159 (279)
T 3fdn_A           82 TRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA  159 (279)
T ss_dssp             SEEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred             CEEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccC
Confidence            9999999999 889999998765  7999999999999999999999999999999999999999999999999988654


Q ss_pred             CC----CcccceeeeeceeEe
Q 024661          245 HA----FSFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~~----~~~~~~~y~ape~~~  261 (264)
                      ..    ...++..|+|||++.
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~  180 (279)
T 3fdn_A          160 PSSRRTDLCGTLDYLPPEMIE  180 (279)
T ss_dssp             --------CCCCTTCCHHHHT
T ss_pred             CcccccccCCCCCccCHhHhc
Confidence            32    335788999999764

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=2.2e-33  Score=231.66  Aligned_cols=169  Identities=20%  Similarity=0.242  Sum_probs=147.5

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCC-------cEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEc
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKK-------ELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIR  159 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~-------~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~  159 (264)
                      +...++|++.+.||+|+||.||+|.+..++       ..||+|++... ....+.+.+|+.+++.++|+|+     ++++
T Consensus         4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~   78 (289)
T 4fvq_A            4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHL-----VLNY   78 (289)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTB-----CCEE
T ss_pred             EechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCE-----eEEE
Confidence            344578999999999999999999998776       46999998753 3456788999999999998887     9999


Q ss_pred             eeeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCc------
Q 024661          160 NWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY------  232 (264)
Q Consensus       160 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~------  232 (264)
                      +++.+.+..|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.      
T Consensus        79 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~  157 (289)
T 4fvq_A           79 GVCVCGDENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNP  157 (289)
T ss_dssp             EEECCTTCCEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBC
T ss_pred             EEEEeCCCCEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCccccccc
Confidence            9999999999999999 899999998754 34999999999999999999999999999999999999999887      


Q ss_pred             --EEeccCCCCCcCCCCc--ccceeeeeceeEee
Q 024661          233 --VKVPDYKVPSPRHAFS--FQTFLSMASRVYIC  262 (264)
Q Consensus       233 --v~l~Dfg~a~~~~~~~--~~~~~y~ape~~~~  262 (264)
                        +||+|||++.......  .++..|+|||++.+
T Consensus       158 ~~~kl~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~  191 (289)
T 4fvq_A          158 PFIKLSDPGISITVLPKDILQERIPWVPPECIEN  191 (289)
T ss_dssp             CEEEECCCCSCTTTSCHHHHHHTTTTSCHHHHHC
T ss_pred             ceeeeccCcccccccCccccCCcCcccCHHHhCC
Confidence              9999999997654432  47788999998653

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=3.5e-33  Score=228.07  Aligned_cols=166  Identities=21%  Similarity=0.256  Sum_probs=145.5

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ...++|++.+.||+|+||.||+|.+. ++..||+|+++......+.+.+|+.+++.+.|+|+     +++++++.+.+..
T Consensus         5 l~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~~   78 (268)
T 3sxs_A            5 LKREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKL-----VKFYGVCSKEYPI   78 (268)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTB-----CCEEEEECSSSSE
T ss_pred             echhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCE-----eeEEEEEccCCce
Confidence            34578999999999999999999876 56679999998766666788999999999998887     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF  247 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~  247 (264)
                      |+||||+ +++|.+++.... ..+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~  157 (268)
T 3sxs_A           79 YIVTEYISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD  157 (268)
T ss_dssp             EEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred             EEEEEccCCCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence            9999999 899999998753 35999999999999999999999999999999999999999999999999999754332


Q ss_pred             -------cccceeeeeceeEe
Q 024661          248 -------SFQTFLSMASRVYI  261 (264)
Q Consensus       248 -------~~~~~~y~ape~~~  261 (264)
                             ..++..|+|||++.
T Consensus       158 ~~~~~~~~~~~~~y~aPE~~~  178 (268)
T 3sxs_A          158 QYVSSVGTKFPVKWSAPEVFH  178 (268)
T ss_dssp             CEEECCSCCCCGGGCCHHHHH
T ss_pred             hhhcccCCCcCcccCCHHHHh
Confidence                   23455699999764

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=2.9e-33  Score=232.01  Aligned_cols=166  Identities=25%  Similarity=0.389  Sum_probs=143.5

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee-----
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-----  164 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~-----  164 (264)
                      +.++|++.+.||+|+||.||+|.+..+++.||+|++.......+.+.+|+.+++.+.|+|+     +++++++.+     
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~~~   78 (303)
T 1zy4_A            4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV-----VRYYAAWLERRNFV   78 (303)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEEEECCCCC
T ss_pred             ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHH-----HHHHHHHHhhcchh
Confidence            4567999999999999999999999999999999998766667888999999999998887     888877654     


Q ss_pred             --------CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEe
Q 024661          165 --------RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV  235 (264)
Q Consensus       165 --------~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l  235 (264)
                              .+..|+||||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+|+||||+|||++.++.++|
T Consensus        79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl  157 (303)
T 1zy4_A           79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKI  157 (303)
T ss_dssp             C------CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEE
T ss_pred             hhhcccccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEE
Confidence                    56789999999 889999998653 46888999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCcCCC--------------------CcccceeeeeceeEe
Q 024661          236 PDYKVPSPRHA--------------------FSFQTFLSMASRVYI  261 (264)
Q Consensus       236 ~Dfg~a~~~~~--------------------~~~~~~~y~ape~~~  261 (264)
                      +|||++.....                    ...++..|+|||++.
T Consensus       158 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  203 (303)
T 1zy4_A          158 GDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLD  203 (303)
T ss_dssp             CCCCCCSCTTC-------------------------CTTSCHHHHT
T ss_pred             eeCcchhhcccccchhccccccccccccccccCCCcccccCccccc
Confidence            99999976431                    234778899999864

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=1.7e-32  Score=227.21  Aligned_cols=166  Identities=25%  Similarity=0.455  Sum_probs=147.4

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----------hhHHHHHHHHHHHHHHh-ccCCCCcceEE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----------KYREAAMIEIDVLQRLA-RHDIGGTRCVQ  157 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----------~~~~~~~~e~~~l~~l~-~~~~~~~~~~~  157 (264)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|+++...          ...+.+.+|+.+++.+. |+|+     ++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i-----~~   88 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNI-----IQ   88 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTB-----CC
T ss_pred             chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCE-----ee
Confidence            55688999999999999999999999999999999987431          33567789999999996 8877     99


Q ss_pred             EceeeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEec
Q 024661          158 IRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  236 (264)
Q Consensus       158 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~  236 (264)
                      +++++.+.+..|+|||++ +++|.+++....  .+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+
T Consensus        89 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~  166 (298)
T 1phk_A           89 LKDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLT  166 (298)
T ss_dssp             EEEEEECSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEEC
T ss_pred             eeeeeccCCeEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEe
Confidence            999999999999999999 889999998765  79999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcCCC-----CcccceeeeeceeEe
Q 024661          237 DYKVPSPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       237 Dfg~a~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      |||++.....     ...++..|+|||++.
T Consensus       167 dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~  196 (298)
T 1phk_A          167 DFGFSCQLDPGEKLREVCGTPSYLAPEIIE  196 (298)
T ss_dssp             CCTTCEECCTTCCBCCCCSCGGGCCHHHHH
T ss_pred             cccchhhcCCCcccccccCCccccCHHHhc
Confidence            9999875432     235788999999864

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=3.6e-33  Score=238.67  Aligned_cols=166  Identities=29%  Similarity=0.453  Sum_probs=138.5

Q ss_pred             cCCCeEE--EeecccCccEEEEEEEeCCCCcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           90 LTPRYRI--LSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        90 ~~~~y~~--~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      ..+.|.+  .+.||+|+||.||+|.+..+|+.||+|+++... ...+.+.+|+.+++.++|+|+     +++++++.+.+
T Consensus        85 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnI-----v~~~~~~~~~~  159 (373)
T 2x4f_A           85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANL-----IQLYDAFESKN  159 (373)
T ss_dssp             GGGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEEECSS
T ss_pred             cccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCC-----CeEEEEEEECC
Confidence            3344555  678999999999999999999999999998543 456778899999999998887     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEee--cCCcEEeccCCCCCc
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV--SAEYVKVPDYKVPSP  243 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~--~~~~v~l~Dfg~a~~  243 (264)
                      .+|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||+.  .++.+||+|||++..
T Consensus       160 ~~~lv~E~~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~  238 (373)
T 2x4f_A          160 DIVLVMEYVDGGELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARR  238 (373)
T ss_dssp             EEEEEEECCTTCEEHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEE
T ss_pred             EEEEEEeCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCcee
Confidence            999999999 899999887543 3689999999999999999999999999999999999994  567899999999976


Q ss_pred             CCC-----CcccceeeeeceeEe
Q 024661          244 RHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~-----~~~~~~~y~ape~~~  261 (264)
                      ...     ...+|..|+|||++.
T Consensus       239 ~~~~~~~~~~~gt~~y~aPE~~~  261 (373)
T 2x4f_A          239 YKPREKLKVNFGTPEFLAPEVVN  261 (373)
T ss_dssp             CCTTCBCCCCCSSCTTCCHHHHT
T ss_pred             cCCccccccccCCCcEeChhhcc
Confidence            432     335889999999753

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=4.6e-33  Score=228.46  Aligned_cols=166  Identities=21%  Similarity=0.355  Sum_probs=148.0

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      .+.++|++.+.||+|+||.||+|.+..++..+|+|.+... ....+.+.+|+++++.++|+|+     +++++++.+.+.
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~   80 (277)
T 3f3z_A            6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNI-----IRLYETFEDNTD   80 (277)
T ss_dssp             CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTB-----CCEEEEEECSSE
T ss_pred             hhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCE-----eeEEEEEecCCe
Confidence            4557899999999999999999999999999999998754 2445778899999999988887     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEe---ecCCcEEeccCCCCCc
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL---VSAEYVKVPDYKVPSP  243 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili---~~~~~v~l~Dfg~a~~  243 (264)
                      .|+||||+ +++|.+++....  .+++..++.++.|++.||+|||++||+|+||||+|||+   +.++.++|+|||++..
T Consensus        81 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~  158 (277)
T 3f3z_A           81 IYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR  158 (277)
T ss_dssp             EEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             EEEEEeccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEeccccee
Confidence            99999999 889999998765  69999999999999999999999999999999999999   7889999999999965


Q ss_pred             CCC-----CcccceeeeeceeEe
Q 024661          244 RHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~-----~~~~~~~y~ape~~~  261 (264)
                      ...     ...+|..|+|||++.
T Consensus       159 ~~~~~~~~~~~~t~~y~aPE~~~  181 (277)
T 3f3z_A          159 FKPGKMMRTKVGTPYYVSPQVLE  181 (277)
T ss_dssp             CCTTSCBCCCCSCTTTCCHHHHT
T ss_pred             ccCccchhccCCCCCccChHHhc
Confidence            332     335788999999754

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=1.9e-33  Score=248.89  Aligned_cols=167  Identities=27%  Similarity=0.454  Sum_probs=143.7

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ..+.++|++++.||+|+||.||+|.+..++..+|+|++.+..   .....+.+|+.+++.+.|+|+     +++++++.+
T Consensus        33 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~~~~~~  107 (494)
T 3lij_A           33 GHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI-----MKLYDFFED  107 (494)
T ss_dssp             CCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTB-----CCEEEEEEC
T ss_pred             CchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCC-----CeEEEEEEe
Confidence            345678999999999999999999999999999999997532   335678899999999998887     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC---CcEEeccCCC
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA---EYVKVPDYKV  240 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~---~~v~l~Dfg~  240 (264)
                      ...+|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++..   +.+||+|||+
T Consensus       108 ~~~~~lv~e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~  185 (494)
T 3lij_A          108 KRNYYLVMECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGL  185 (494)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred             CCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCC
Confidence            99999999999 899999998765  79999999999999999999999999999999999999764   4599999999


Q ss_pred             CCcCCC-----CcccceeeeeceeEe
Q 024661          241 PSPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       241 a~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      +.....     ...+|..|+|||++.
T Consensus       186 a~~~~~~~~~~~~~gt~~y~aPE~l~  211 (494)
T 3lij_A          186 SAVFENQKKMKERLGTAYYIAPEVLR  211 (494)
T ss_dssp             CEECBTTBCBCCCCSCTTTCCHHHHT
T ss_pred             CeECCCCccccccCCCcCeeCHHHHc
Confidence            975432     345899999999753

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=2.6e-33  Score=238.40  Aligned_cols=170  Identities=23%  Similarity=0.332  Sum_probs=149.7

Q ss_pred             eCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeee
Q 024661           86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        86 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~  163 (264)
                      .++...++|++.+.||+|+||.||+|.+..+++.||+|++...  ....+.+.+|+.+++.+.|+|+     +++++++.
T Consensus        27 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~  101 (360)
T 3eqc_A           27 VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI-----VGFYGAFY  101 (360)
T ss_dssp             CCCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTB-----CCEEEEEE
T ss_pred             ccccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCE-----EEEeEEEE
Confidence            4556678899999999999999999999999999999998753  4456778899999999988877     99999999


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEeecCCcEEeccCCCC
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKVP  241 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~Nili~~~~~v~l~Dfg~a  241 (264)
                      +.+..|+||||+ +++|.+++....  .+++..+..++.|++.||.|||+. ||+|+||||+|||++.++.++|+|||++
T Consensus       102 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~  179 (360)
T 3eqc_A          102 SDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS  179 (360)
T ss_dssp             ETTEEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCC
T ss_pred             ECCEEEEEEECCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCC
Confidence            999999999999 889999998765  799999999999999999999985 9999999999999999999999999998


Q ss_pred             CcC----CCCcccceeeeeceeEee
Q 024661          242 SPR----HAFSFQTFLSMASRVYIC  262 (264)
Q Consensus       242 ~~~----~~~~~~~~~y~ape~~~~  262 (264)
                      ...    .....+|..|+|||++.+
T Consensus       180 ~~~~~~~~~~~~gt~~y~aPE~~~~  204 (360)
T 3eqc_A          180 GQLIDSMANSFVGTRSYMSPERLQG  204 (360)
T ss_dssp             HHHHHHC----CCCCTTCCHHHHTT
T ss_pred             cccccccccCCCCCCCeECHHHHcC
Confidence            642    234468899999998643

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=9.3e-33  Score=229.70  Aligned_cols=167  Identities=22%  Similarity=0.359  Sum_probs=146.3

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      .+.++|.+.+.||+|+||.||+|.+..+|+.||+|++.... ...+.+.+|+.+++.+.|+|+     +++++++.+.+.
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~   80 (304)
T 2jam_A            6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENI-----VTLEDIYESTTH   80 (304)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTB-----CCEEEEEECSSE
T ss_pred             chhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCe-----eehhhhcccCCE
Confidence            45678999999999999999999999999999999997543 234568899999999998887     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEe---ecCCcEEeccCCCCCc
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL---VSAEYVKVPDYKVPSP  243 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili---~~~~~v~l~Dfg~a~~  243 (264)
                      .|+||||+ +++|.+++....  .+++..++.++.|++.||.|||++||+|+||||+||++   +.++.++|+|||++..
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~  158 (304)
T 2jam_A           81 YYLVMQLVSGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM  158 (304)
T ss_dssp             EEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCC
T ss_pred             EEEEEEcCCCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCccee
Confidence            99999999 899999998765  79999999999999999999999999999999999999   7788999999999976


Q ss_pred             CCCC----cccceeeeeceeEee
Q 024661          244 RHAF----SFQTFLSMASRVYIC  262 (264)
Q Consensus       244 ~~~~----~~~~~~y~ape~~~~  262 (264)
                      ....    ..++..|+|||++.+
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~  181 (304)
T 2jam_A          159 EQNGIMSTACGTPGYVAPEVLAQ  181 (304)
T ss_dssp             CCCBTTHHHHSCCCBCCTTTBSS
T ss_pred             cCCCccccccCCCCccChHHhcc
Confidence            5432    247889999998753

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=1.1e-32  Score=235.10  Aligned_cols=166  Identities=24%  Similarity=0.412  Sum_probs=147.4

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---------hhHHHHHHHHHHHHHH-hccCCCCcceEEE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------KYREAAMIEIDVLQRL-ARHDIGGTRCVQI  158 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~  158 (264)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||||++....         ...+.+.+|+.+++.+ .|+|+     +.+
T Consensus        91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~i-----v~~  165 (365)
T 2y7j_A           91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHI-----ITL  165 (365)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTB-----CCE
T ss_pred             hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCE-----eEE
Confidence            44578999999999999999999999999999999987432         2346778899999999 68877     999


Q ss_pred             ceeeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEecc
Q 024661          159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  237 (264)
Q Consensus       159 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~D  237 (264)
                      ++++......|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+|+||||+|||++.++.++|+|
T Consensus       166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~D  243 (365)
T 2y7j_A          166 IDSYESSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSD  243 (365)
T ss_dssp             EEEEEBSSEEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECC
T ss_pred             EEEEeeCCEEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEe
Confidence            99999999999999999 889999998765  799999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcCCC-----CcccceeeeeceeEe
Q 024661          238 YKVPSPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       238 fg~a~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      ||++.....     ...+|..|+|||++.
T Consensus       244 fG~~~~~~~~~~~~~~~gt~~y~aPE~~~  272 (365)
T 2y7j_A          244 FGFSCHLEPGEKLRELCGTPGYLAPEILK  272 (365)
T ss_dssp             CTTCEECCTTCCBCCCCSCGGGCCHHHHH
T ss_pred             cCcccccCCCcccccCCCCCCccChhhcc
Confidence            999875432     345889999999864

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.8e-33  Score=242.47  Aligned_cols=170  Identities=20%  Similarity=0.291  Sum_probs=146.7

Q ss_pred             CCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      +....++|++.+.||+|+||.||+|.+..+++.||+|++....  ...+.+.+|+++++.++|+|+     +++++++.+
T Consensus         4 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnI-----v~~~~~~~~   78 (396)
T 4eut_A            4 QSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNI-----VKLFAIEEE   78 (396)
T ss_dssp             EECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTB-----CCEEEEEEC
T ss_pred             CCCCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCC-----CeEEEeecc
Confidence            3456788999999999999999999999999999999997533  335677899999999999887     999999887


Q ss_pred             CC--EEEEEEecC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEe----ecCCcEEec
Q 024661          165 RN--HICIVFEKL-GPSLYDFLRKNS-YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL----VSAEYVKVP  236 (264)
Q Consensus       165 ~~--~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili----~~~~~v~l~  236 (264)
                      .+  ..|+||||+ +++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+|||+    +.++.+||+
T Consensus        79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~  158 (396)
T 4eut_A           79 TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLT  158 (396)
T ss_dssp             TTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEEC
T ss_pred             CCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEe
Confidence            54  789999999 899999998643 2249999999999999999999999999999999999999    667789999


Q ss_pred             cCCCCCcCCC-----CcccceeeeeceeEe
Q 024661          237 DYKVPSPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       237 Dfg~a~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      |||++.....     ...+|..|+|||++.
T Consensus       159 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~  188 (396)
T 4eut_A          159 DFGAARELEDDEQFVSLYGTEEYLHPDMYE  188 (396)
T ss_dssp             CGGGCEECCCGGGSSCSSSCCTTCCHHHHH
T ss_pred             cCCCceEccCCCccccccCCccccCHHHhh
Confidence            9999976433     335888999999864

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.1e-32  Score=231.88  Aligned_cols=167  Identities=25%  Similarity=0.255  Sum_probs=132.7

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech-hhhHHHHHHHHHHHHHHh-ccCCCCcceEEEceee-----
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWF-----  162 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~-----  162 (264)
                      ...+|++.+.||+|+||.||+|.+..+++.||+|++... ....+.+.+|+.+++.+. |+|+     +++++++     
T Consensus        26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~i-----v~~~~~~~~~~~  100 (337)
T 3ll6_A           26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI-----VQFCSAASIGKE  100 (337)
T ss_dssp             TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTB-----CCEEEEEEECTT
T ss_pred             cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCCh-----hhcccccccccc
Confidence            345799999999999999999999999999999988643 344567889999999996 8887     8888888     


Q ss_pred             ---eeCCEEEEEEecCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEeecCCcEEec
Q 024661          163 ---DYRNHICIVFEKLGPSLYDFLRKN-SYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVP  236 (264)
Q Consensus       163 ---~~~~~~~lv~e~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dikp~Nili~~~~~v~l~  236 (264)
                         .....+++||||++|+|.+++... ....+++..++.++.||+.||.|||++|  |+|+||||+|||++.++.+||+
T Consensus       101 ~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~  180 (337)
T 3ll6_A          101 ESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLC  180 (337)
T ss_dssp             TSTTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBC
T ss_pred             ccccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEe
Confidence               345678999999999999998752 2246999999999999999999999999  9999999999999999999999


Q ss_pred             cCCCCCcCCC------------------CcccceeeeeceeEe
Q 024661          237 DYKVPSPRHA------------------FSFQTFLSMASRVYI  261 (264)
Q Consensus       237 Dfg~a~~~~~------------------~~~~~~~y~ape~~~  261 (264)
                      |||++.....                  ...+|..|+|||++.
T Consensus       181 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~  223 (337)
T 3ll6_A          181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIID  223 (337)
T ss_dssp             CCTTCBCCSSCC-------------------------------
T ss_pred             cCccceeccccCcccccccccccchhhccccCCCCcCChhhhh
Confidence            9999976543                  234788899999873

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.8e-33  Score=240.11  Aligned_cols=169  Identities=19%  Similarity=0.283  Sum_probs=142.5

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEe-----CCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEce
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFD-----NEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~  160 (264)
                      +...++|++.+.||+|+||.||+|.+     ..+++.||+|+++..  ......+.+|+.+++.++|+|+     +++++
T Consensus        67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnI-----v~~~~  141 (367)
T 3l9p_A           67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI-----VRCIG  141 (367)
T ss_dssp             BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTB-----CCEEE
T ss_pred             hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCC-----CeEEE
Confidence            34457899999999999999999994     456788999998642  3445678889999999999888     99999


Q ss_pred             eeeeCCEEEEEEecC-CCCHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC---
Q 024661          161 WFDYRNHICIVFEKL-GPSLYDFLRKNS-----YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE---  231 (264)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~---  231 (264)
                      ++.+....|+||||+ +++|.+++....     ...+++..++.++.||+.||+|||++||+||||||+|||++.++   
T Consensus       142 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~  221 (367)
T 3l9p_A          142 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR  221 (367)
T ss_dssp             EECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTC
T ss_pred             EEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCc
Confidence            999999999999999 889999998653     13589999999999999999999999999999999999999555   


Q ss_pred             cEEeccCCCCCcC--------CCCcccceeeeeceeEe
Q 024661          232 YVKVPDYKVPSPR--------HAFSFQTFLSMASRVYI  261 (264)
Q Consensus       232 ~v~l~Dfg~a~~~--------~~~~~~~~~y~ape~~~  261 (264)
                      .+||+|||+++..        .....+|..|||||++.
T Consensus       222 ~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~  259 (367)
T 3l9p_A          222 VAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFM  259 (367)
T ss_dssp             CEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHH
T ss_pred             eEEECCCccccccccccccccCCCcCCcccEECHHHhc
Confidence            5999999998632        22334678899999764

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=9.3e-33  Score=226.42  Aligned_cols=168  Identities=25%  Similarity=0.322  Sum_probs=143.3

Q ss_pred             CCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceee
Q 024661           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (264)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~  162 (264)
                      +....++|++.+.||+|+||.||+|.+..+++.||+|++....    ...+.+.+|+.+++.+.|+|+     +++++++
T Consensus         6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~   80 (276)
T 2h6d_A            6 GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHI-----IKLYQVI   80 (276)
T ss_dssp             -CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTB-----CCEEEEE
T ss_pred             CcceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCE-----eEEEEEE
Confidence            3455578999999999999999999999999999999997532    234678899999999988887     9999999


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCC
Q 024661          163 DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVP  241 (264)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a  241 (264)
                      .+.+..|+|||++ +++|.+++....  .+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++
T Consensus        81 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~  158 (276)
T 2h6d_A           81 STPTDFFMVMEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS  158 (276)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGG
T ss_pred             ecCCeEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccc
Confidence            9999999999999 889999998765  6899999999999999999999999999999999999999999999999998


Q ss_pred             CcCCC-----CcccceeeeeceeEe
Q 024661          242 SPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       242 ~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      .....     ...++..|+|||++.
T Consensus       159 ~~~~~~~~~~~~~~~~~y~aPE~~~  183 (276)
T 2h6d_A          159 NMMSDGEFLRTSCGSPNYAAPEVIS  183 (276)
T ss_dssp             GCCCC-------------CCTGGGT
T ss_pred             cccCCCcceecccCCccccCHHHHc
Confidence            76543     335788899999864

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=8.4e-33  Score=229.54  Aligned_cols=167  Identities=22%  Similarity=0.328  Sum_probs=142.2

Q ss_pred             ccCCCeEEEeecccCccEEEEEEE----eCCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceee
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECF----DNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~  162 (264)
                      ....+|++.+.||+|+||.||+|.    +..+++.||+|++....  ...+.+.+|+.+++.++|+|+     +++++++
T Consensus        18 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~   92 (302)
T 4e5w_A           18 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENI-----VKYKGIC   92 (302)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTB-----CCEEEEE
T ss_pred             hhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCe-----eeeeeEE
Confidence            344669999999999999999999    56789999999987432  344678899999999998887     9999998


Q ss_pred             eeC--CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          163 DYR--NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       163 ~~~--~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                      .+.  ..+++||||+ +++|.+++.... ..+++..++.++.|++.||+|||++||+|+||||+|||++.++.++|+|||
T Consensus        93 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg  171 (302)
T 4e5w_A           93 TEDGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFG  171 (302)
T ss_dssp             EC---CCEEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCT
T ss_pred             ecCCCceEEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECccc
Confidence            876  6799999999 889999996654 369999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCC---------CcccceeeeeceeEe
Q 024661          240 VPSPRHA---------FSFQTFLSMASRVYI  261 (264)
Q Consensus       240 ~a~~~~~---------~~~~~~~y~ape~~~  261 (264)
                      ++.....         ...+|..|+|||++.
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  202 (302)
T 4e5w_A          172 LTKAIETDKEYYTVKDDRDSPVFWYAPECLM  202 (302)
T ss_dssp             TCEECCTTCCEEECCCCTTCCGGGCCHHHHH
T ss_pred             ccccccCCCcceeccCCCCCCccccCCeeec
Confidence            9975432         234666799999764

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.1e-33  Score=238.67  Aligned_cols=163  Identities=23%  Similarity=0.340  Sum_probs=143.1

Q ss_pred             CCeEEEeecccCccEEEEEEEeC---CCCcEEEEEEEech-----hhhHHHHHHHHHHHHHHh-ccCCCCcceEEEceee
Q 024661           92 PRYRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSI-----NKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWF  162 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~  162 (264)
                      ++|++.+.||+|+||.||+|++.   .+++.||+|++++.     ....+.+.+|+++++.+. |+++     +.+++++
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----v~~~~~~  128 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL-----VTLHYAF  128 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTB-----CCEEEEE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCce-----eEEEEEE
Confidence            67999999999999999999984   47899999998642     233456677999999995 6766     9999999


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCC
Q 024661          163 DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVP  241 (264)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a  241 (264)
                      ...+.+|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++++||+|||++
T Consensus       129 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a  206 (355)
T 1vzo_A          129 QTETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS  206 (355)
T ss_dssp             EETTEEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred             eeCceEEEEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCC
Confidence            9999999999999 899999998765  7999999999999999999999999999999999999999999999999998


Q ss_pred             CcCCC-------CcccceeeeeceeEe
Q 024661          242 SPRHA-------FSFQTFLSMASRVYI  261 (264)
Q Consensus       242 ~~~~~-------~~~~~~~y~ape~~~  261 (264)
                      +....       ...+|..|+|||++.
T Consensus       207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~  233 (355)
T 1vzo_A          207 KEFVADETERAYDFCGTIEYMAPDIVR  233 (355)
T ss_dssp             EECCGGGGGGGCGGGSCCTTCCHHHHT
T ss_pred             eecccCCCCcccCcccCcCccChhhhc
Confidence            75321       235889999999875

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=7.7e-33  Score=232.95  Aligned_cols=166  Identities=25%  Similarity=0.396  Sum_probs=142.3

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      ...++|++.+.||+|+||.||+|.+..+++.||+|++...   ....+.+.+|+.+++.+.|+|+     +++++++.+.
T Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~   96 (331)
T 4aaa_A           22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENL-----VNLLEVCKKK   96 (331)
T ss_dssp             BCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEEEET
T ss_pred             hhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCE-----eeEEEEeecC
Confidence            3447899999999999999999999999999999998643   2345667889999999998887     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      +..|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++...
T Consensus        97 ~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  174 (331)
T 4aaa_A           97 KRWYLVFEFVDHTILDDLELFPN--GLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTL  174 (331)
T ss_dssp             TEEEEEEECCSEEHHHHHHHSTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred             CEEEEEEecCCcchHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceee
Confidence            9999999999 666666655544  6999999999999999999999999999999999999999999999999999753


Q ss_pred             C------CCcccceeeeeceeEe
Q 024661          245 H------AFSFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~------~~~~~~~~y~ape~~~  261 (264)
                      .      ....++..|+|||++.
T Consensus       175 ~~~~~~~~~~~~t~~y~aPE~~~  197 (331)
T 4aaa_A          175 AAPGEVYDDEVATRWYRAPELLV  197 (331)
T ss_dssp             ---------CCCCCTTCCHHHHT
T ss_pred             cCCccccCCCcCCccccCccccc
Confidence            2      2345788899999764

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=8.3e-33  Score=230.64  Aligned_cols=164  Identities=23%  Similarity=0.364  Sum_probs=141.7

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++....    ...+.+.+|+.+++.+.|+|+     +++++++.+++
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i-----v~~~~~~~~~~  107 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHV-----VPIHDFGEIDG  107 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEEEETT
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCe-----eEEEEEEeeCC
Confidence            367999999999999999999999999999999987432    334678899999999988887     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      ..|+|||++ +++|.+++....  .+++..++.++.|++.||.|||++||+|+||||+|||++.++.+||+|||++....
T Consensus       108 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  185 (309)
T 2h34_A          108 QLYVDMRLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATT  185 (309)
T ss_dssp             EEEEEEECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred             eEEEEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence            999999999 789999998765  79999999999999999999999999999999999999999999999999987643


Q ss_pred             C-------CcccceeeeeceeEe
Q 024661          246 A-------FSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ~-------~~~~~~~y~ape~~~  261 (264)
                      .       ...++..|+|||++.
T Consensus       186 ~~~~~~~~~~~~~~~y~aPE~~~  208 (309)
T 2h34_A          186 DEKLTQLGNTVGTLYYMAPERFS  208 (309)
T ss_dssp             -----------CCGGGCCGGGTC
T ss_pred             ccccccccccCCCcCccCHHHHc
Confidence            3       235788899999764

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=4.1e-33  Score=239.24  Aligned_cols=166  Identities=25%  Similarity=0.425  Sum_probs=138.4

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee----
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY----  164 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~----  164 (264)
                      ...++|++.+.||+|+||.||+|.+..+|+.||+|++......   ..+|+.+++.++|+|+     +++++++..    
T Consensus         4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~---~~~E~~il~~l~hpnI-----v~l~~~~~~~~~~   75 (383)
T 3eb0_A            4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY---KNRELDIMKVLDHVNI-----IKLVDYFYTTGDE   75 (383)
T ss_dssp             --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS---CCHHHHHHTTCCCTTB-----CCEEEEEEEC---
T ss_pred             cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch---HHHHHHHHHHcCCCCc-----cchhheeeecCcc
Confidence            3457899999999999999999999999999999998754332   2369999999998887     899888843    


Q ss_pred             ----------------------------------CCEEEEEEecCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHH
Q 024661          165 ----------------------------------RNHICIVFEKLGPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVA  208 (264)
Q Consensus       165 ----------------------------------~~~~~lv~e~~~~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~  208 (264)
                                                        ..++++||||+.++|.+.+..  .....+++..++.++.||+.||.
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~  155 (383)
T 3eb0_A           76 EPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG  155 (383)
T ss_dssp             ----------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence                                              445899999998898888764  22347999999999999999999


Q ss_pred             HHHHCCCeecCCCCCCEEee-cCCcEEeccCCCCCcCC-----CCcccceeeeeceeEee
Q 024661          209 FMHELRLIHTDLKPENILLV-SAEYVKVPDYKVPSPRH-----AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       209 ~lH~~~ivH~dikp~Nili~-~~~~v~l~Dfg~a~~~~-----~~~~~~~~y~ape~~~~  262 (264)
                      |||++||+||||||+|||++ .++.+||+|||+|....     ....+|..|+|||++.+
T Consensus       156 ~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~  215 (383)
T 3eb0_A          156 FIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLG  215 (383)
T ss_dssp             HHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTT
T ss_pred             HHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcC
Confidence            99999999999999999998 58899999999997532     23357888999998653

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=9.7e-33  Score=227.37  Aligned_cols=164  Identities=23%  Similarity=0.367  Sum_probs=146.6

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++....    ...+.+.+|+++++.++|+|+     +++++++.+.+
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~   87 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNI-----LRMYNYFHDRK   87 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTB-----CCEEEEEECSS
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCE-----eeEEEEEEcCC
Confidence            367999999999999999999999999999999997532    234678899999999998887     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      ..|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++....
T Consensus        88 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~  165 (284)
T 2vgo_A           88 RIYLMLEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP  165 (284)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred             EEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence            999999999 889999998765  79999999999999999999999999999999999999999999999999986543


Q ss_pred             C----CcccceeeeeceeEe
Q 024661          246 A----FSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ~----~~~~~~~y~ape~~~  261 (264)
                      .    ...++..|+|||++.
T Consensus       166 ~~~~~~~~~~~~y~aPE~~~  185 (284)
T 2vgo_A          166 SLRRRTMCGTLDYLPPEMIE  185 (284)
T ss_dssp             SSCBCCCCSCGGGCCHHHHT
T ss_pred             ccccccccCCCCcCCHHHhc
Confidence            2    335788999999764

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=4.7e-33  Score=236.57  Aligned_cols=168  Identities=21%  Similarity=0.275  Sum_probs=141.9

Q ss_pred             ccCCCeEEEeecccCccEEEEEEE-----eCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHH-hccCCCCcceEEEce
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECF-----DNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRN  160 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~  160 (264)
                      ...++|++.+.||+|+||.||+|.     +..+++.||+|+++..  ....+.+.+|+++++.+ .|+|+     +++++
T Consensus        19 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpni-----v~~~~   93 (359)
T 3vhe_A           19 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV-----VNLLG   93 (359)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTB-----CCEEE
T ss_pred             ccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcce-----eeeee
Confidence            345789999999999999999999     5566789999999753  23456789999999999 56777     99999


Q ss_pred             eeeeCC-EEEEEEecC-CCCHHHHHHhcCC--------------------------------------------------
Q 024661          161 WFDYRN-HICIVFEKL-GPSLYDFLRKNSY--------------------------------------------------  188 (264)
Q Consensus       161 ~~~~~~-~~~lv~e~~-~~~L~~~l~~~~~--------------------------------------------------  188 (264)
                      ++.+.+ .+++||||+ +++|.+++.....                                                  
T Consensus        94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (359)
T 3vhe_A           94 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSL  173 (359)
T ss_dssp             EECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------
T ss_pred             eeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccccc
Confidence            988754 599999999 8999999986531                                                  


Q ss_pred             --------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC--------
Q 024661          189 --------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA--------  246 (264)
Q Consensus       189 --------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~--------  246 (264)
                                    ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....        
T Consensus       174 ~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~  253 (359)
T 3vhe_A          174 SDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG  253 (359)
T ss_dssp             ----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC-
T ss_pred             chhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhcc
Confidence                          1289999999999999999999999999999999999999999999999999975422        


Q ss_pred             CcccceeeeeceeEe
Q 024661          247 FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ~~~~~~~y~ape~~~  261 (264)
                      ...+|..|||||++.
T Consensus       254 ~~~~t~~y~aPE~~~  268 (359)
T 3vhe_A          254 DARLPLKWMAPETIF  268 (359)
T ss_dssp             -CEECGGGCCHHHHH
T ss_pred             ccCCCceeEChhhhc
Confidence            223566799999764

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=4.2e-33  Score=235.37  Aligned_cols=169  Identities=20%  Similarity=0.303  Sum_probs=145.4

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCC-----CCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEce
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~  160 (264)
                      +...++|++.+.||+|+||.||+|.+..     +++.||+|+++..  ....+.+.+|+.+++.++|+|+     +++++
T Consensus        43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~  117 (343)
T 1luf_A           43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI-----VKLLG  117 (343)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTB-----CCEEE
T ss_pred             EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCE-----EEEEE
Confidence            3455789999999999999999999873     4588999998753  3445778999999999998887     99999


Q ss_pred             eeeeCCEEEEEEecC-CCCHHHHHHhcCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 024661          161 WFDYRNHICIVFEKL-GPSLYDFLRKNSY----------------------RSFPIDLVRELGRQLLESVAFMHELRLIH  217 (264)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~----------------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH  217 (264)
                      ++.+.+..|+||||+ +++|.+++.....                      ..+++..++.++.||+.||.|||++||+|
T Consensus       118 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH  197 (343)
T 1luf_A          118 VCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVH  197 (343)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             EEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence            999999999999999 8899999987421                      46899999999999999999999999999


Q ss_pred             cCCCCCCEEeecCCcEEeccCCCCCcCC--------CCcccceeeeeceeEe
Q 024661          218 TDLKPENILLVSAEYVKVPDYKVPSPRH--------AFSFQTFLSMASRVYI  261 (264)
Q Consensus       218 ~dikp~Nili~~~~~v~l~Dfg~a~~~~--------~~~~~~~~y~ape~~~  261 (264)
                      |||||+|||++.++.+||+|||++....        ....++..|+|||++.
T Consensus       198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~  249 (343)
T 1luf_A          198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIF  249 (343)
T ss_dssp             SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHH
T ss_pred             CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhc
Confidence            9999999999999999999999986432        2234677899999754

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=4e-33  Score=229.33  Aligned_cols=167  Identities=26%  Similarity=0.347  Sum_probs=145.1

Q ss_pred             CCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee--
Q 024661           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--  164 (264)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~--  164 (264)
                      +..+.++|++.+.||+|+||.||+|.+..+++.||+|++....   +.+.+|+++++.+.|+|+     +++++++..  
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~   77 (284)
T 2a19_B            6 DKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNI-----VHYNGCWDGFD   77 (284)
T ss_dssp             CHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTB-----CCEEEEEEEEE
T ss_pred             cchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCE-----EEEeeeEeccc
Confidence            4466678999999999999999999999999999999997543   345679999999999888     888887754  


Q ss_pred             --------------CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec
Q 024661          165 --------------RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS  229 (264)
Q Consensus       165 --------------~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~  229 (264)
                                    ...+|+||||+ +++|.+++.......+++..++.++.||+.||.|||++||+|+||||+|||++.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~  157 (284)
T 2a19_B           78 YDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVD  157 (284)
T ss_dssp             EC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE
T ss_pred             cCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcC
Confidence                          45689999999 789999998764457999999999999999999999999999999999999999


Q ss_pred             CCcEEeccCCCCCcCCC-----CcccceeeeeceeEe
Q 024661          230 AEYVKVPDYKVPSPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       230 ~~~v~l~Dfg~a~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      ++.++|+|||++.....     ...++..|+|||++.
T Consensus       158 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~  194 (284)
T 2a19_B          158 TKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQIS  194 (284)
T ss_dssp             TTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHH
T ss_pred             CCCEEECcchhheeccccccccccCCcccccChhhhc
Confidence            99999999999876432     335788999999764

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.2e-33  Score=237.76  Aligned_cols=166  Identities=25%  Similarity=0.406  Sum_probs=140.2

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh------hhHHHHHHHHHHHHHHhccCCCCcceEEEceeee
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~  163 (264)
                      ..++|++.+.||+|+||.||+|.+..+|+.||+|++....      ...+.+.+|+.+++.+.|+|+     +++++++.
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~   82 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNI-----IGLLDAFG   82 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTB-----CCEEEEEC
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCC-----CeEEEEEe
Confidence            3478999999999999999999999999999999987422      113467789999999998887     99999999


Q ss_pred             eCCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          164 YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       164 ~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      +.+..++||||+.++|.+++.... ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus        83 ~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~  161 (346)
T 1ua2_A           83 HKSNISLVFDFMETDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKS  161 (346)
T ss_dssp             CTTCCEEEEECCSEEHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred             eCCceEEEEEcCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEeccccee
Confidence            999999999999779999987653 4688999999999999999999999999999999999999999999999999976


Q ss_pred             CCC------CcccceeeeeceeEe
Q 024661          244 RHA------FSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~------~~~~~~~y~ape~~~  261 (264)
                      ...      ...+|..|+|||++.
T Consensus       162 ~~~~~~~~~~~~~t~~y~aPE~~~  185 (346)
T 1ua2_A          162 FGSPNRAYTHQVVTRWYRAPELLF  185 (346)
T ss_dssp             TTSCCCCCCCSCCCCTTCCHHHHT
T ss_pred             ccCCcccCCcccccccccCchHhh
Confidence            432      335788999999864

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=1.1e-32  Score=226.74  Aligned_cols=165  Identities=25%  Similarity=0.478  Sum_probs=145.7

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-------hhHHHHHHHHHHHHHHhccCCCCcceEEEceee
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~  162 (264)
                      +.++|++.+.||+|+||.||+|.+..+++.+|+|+++...       ...+.+.+|+.+++.+.|+|+     +++++++
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~   77 (283)
T 3bhy_A            3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI-----ITLHDIF   77 (283)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTB-----CCEEEEE
T ss_pred             hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCe-----eehhhee
Confidence            3467999999999999999999999999999999987432       135778999999999998887     9999999


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC----cEEecc
Q 024661          163 DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE----YVKVPD  237 (264)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~----~v~l~D  237 (264)
                      .+.+..++|||++ +++|.+++....  .+++..++.++.||+.||.|||++||+|+||||+||+++.++    .++|+|
T Consensus        78 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~d  155 (283)
T 3bhy_A           78 ENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLID  155 (283)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECC
T ss_pred             cCCCeEEEEEeecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEe
Confidence            9999999999999 899999998765  799999999999999999999999999999999999999877    899999


Q ss_pred             CCCCCcCCC-----CcccceeeeeceeEe
Q 024661          238 YKVPSPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       238 fg~a~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      ||++.....     ...++..|+|||++.
T Consensus       156 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~  184 (283)
T 3bhy_A          156 FGIAHKIEAGNEFKNIFGTPEFVAPEIVN  184 (283)
T ss_dssp             CTTCEECC--------CCCGGGCCHHHHT
T ss_pred             cccceeccCCCcccccCCCcCccCcceec
Confidence            999976432     235788899999764

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=1.5e-32  Score=232.91  Aligned_cols=167  Identities=25%  Similarity=0.340  Sum_probs=145.2

Q ss_pred             CCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ...+.++|++.+.||+|+||.||+|.+..+|+.||+|++...  ......+.+|+.+++.++|+|+     +++++++..
T Consensus         6 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~   80 (353)
T 2b9h_A            6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI-----ITIFNIQRP   80 (353)
T ss_dssp             CCCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTB-----CCEEEECCC
T ss_pred             ccccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCc-----CCeeeeecc
Confidence            346778999999999999999999999999999999998642  3445677899999999999888     888887665


Q ss_pred             C-----CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          165 R-----NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       165 ~-----~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                      .     ...|+|||+++++|.+++...   .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus        81 ~~~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg  157 (353)
T 2b9h_A           81 DSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFG  157 (353)
T ss_dssp             SCSTTCCCEEEEECCCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCT
T ss_pred             cccCccceEEEEEeccCccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecc
Confidence            3     789999999988999999874   59999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCC----------------CcccceeeeeceeEe
Q 024661          240 VPSPRHA----------------FSFQTFLSMASRVYI  261 (264)
Q Consensus       240 ~a~~~~~----------------~~~~~~~y~ape~~~  261 (264)
                      ++.....                ...+|..|+|||++.
T Consensus       158 ~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  195 (353)
T 2b9h_A          158 LARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVML  195 (353)
T ss_dssp             TCEECC----------------CCCCCCGGGCCHHHHH
T ss_pred             cccccccccccccCccccccchhhccccccccCCeeec
Confidence            9975431                124688899999754

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=1.8e-33  Score=240.91  Aligned_cols=165  Identities=19%  Similarity=0.289  Sum_probs=144.1

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      .++|.+.+.||+|+||.||+|.+..+++.||+|+++..  ....+.+.+|+++++.+.|+|+     +++++++.+.+.+
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~~~~~~~~~~  187 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNI-----VRLIGVCTQKQPI  187 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTB-----CCEEEEECSSSSC
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCE-----EEEEEEEecCCCc
Confidence            46799999999999999999999999999999998743  2334567889999999998887     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF  247 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~  247 (264)
                      |+||||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus       188 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~  266 (377)
T 3cbl_A          188 YIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADG  266 (377)
T ss_dssp             EEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred             EEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence            9999999 899999998653 35899999999999999999999999999999999999999999999999999754321


Q ss_pred             --------cccceeeeeceeEe
Q 024661          248 --------SFQTFLSMASRVYI  261 (264)
Q Consensus       248 --------~~~~~~y~ape~~~  261 (264)
                              ..++..|+|||++.
T Consensus       267 ~~~~~~~~~~~~~~y~aPE~~~  288 (377)
T 3cbl_A          267 VYAASGGLRQVPVKWTAPEALN  288 (377)
T ss_dssp             EEECCSSCCEEEGGGSCHHHHH
T ss_pred             ceeecCCCCCCCcCcCCHhHhc
Confidence                    12355699999753

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=100.00  E-value=4.8e-33  Score=230.66  Aligned_cols=165  Identities=28%  Similarity=0.478  Sum_probs=144.2

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ++|++.+.||+|+||.||+|.+..+++.||+|+++...   ...+.+.+|+.+++.+.|+|+     +++++++.+.+..
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~   77 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----VKLLDVIHTENKL   77 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTB-----CCEEEEEEETTEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCe-----eeEEEEEecCCce
Confidence            57999999999999999999999999999999986432   233677889999999988887     9999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC---
Q 024661          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH---  245 (264)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~---  245 (264)
                      |+|||++.++|.+++.......+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++....   
T Consensus        78 ~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~  157 (299)
T 2r3i_A           78 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV  157 (299)
T ss_dssp             EEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred             EEEEEcccCCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc
Confidence            99999998899999987755579999999999999999999999999999999999999999999999999886432   


Q ss_pred             ---CCcccceeeeeceeEe
Q 024661          246 ---AFSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ---~~~~~~~~y~ape~~~  261 (264)
                         ....++..|+|||++.
T Consensus       158 ~~~~~~~~~~~y~aPE~~~  176 (299)
T 2r3i_A          158 RTYTHEVVTLWYRAPEILL  176 (299)
T ss_dssp             BCTTSCBCCCTTCCHHHHT
T ss_pred             cccCcccccccccCcHHhh
Confidence               2335788899999764

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=3.5e-33  Score=242.33  Aligned_cols=166  Identities=30%  Similarity=0.438  Sum_probs=138.4

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---------hhHHHHHHHHHHHHHHhccCCCCcceEEEc
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------KYREAAMIEIDVLQRLARHDIGGTRCVQIR  159 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~  159 (264)
                      .+.++|.+.+.||+|+||.||+|.+..+++.||+|++.+..         .....+.+|+.+++.++|+|+     ++++
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~l~  206 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI-----IKIK  206 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTB-----CCCC
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCE-----eeEE
Confidence            44578999999999999999999999999999999997532         112347789999999999888     8899


Q ss_pred             eeeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC---cEEe
Q 024661          160 NWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE---YVKV  235 (264)
Q Consensus       160 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~---~v~l  235 (264)
                      +++.. +..|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++   .+||
T Consensus       207 ~~~~~-~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl  283 (419)
T 3i6u_A          207 NFFDA-EDYYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKI  283 (419)
T ss_dssp             EEEES-SEEEEEEECCTTCBGGGGTSSSC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred             EEEec-CceEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEE
Confidence            98754 5689999999 899999887654  799999999999999999999999999999999999997544   5999


Q ss_pred             ccCCCCCcCCC-----CcccceeeeeceeEee
Q 024661          236 PDYKVPSPRHA-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       236 ~Dfg~a~~~~~-----~~~~~~~y~ape~~~~  262 (264)
                      +|||++.....     ...+|..|||||++.+
T Consensus       284 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~  315 (419)
T 3i6u_A          284 TDFGHSKILGETSLMRTLCGTPTYLAPEVLVS  315 (419)
T ss_dssp             CCSSTTTSCC-----------CTTCCTTTTC-
T ss_pred             eecccceecCCCccccccCCCCCccCceeeec
Confidence            99999987543     3357889999998753

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.8e-33  Score=234.80  Aligned_cols=168  Identities=21%  Similarity=0.344  Sum_probs=135.9

Q ss_pred             CCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh-------hHHHHHHHHHHHHHH----hccCCCCcce
Q 024661           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRL----ARHDIGGTRC  155 (264)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~e~~~l~~l----~~~~~~~~~~  155 (264)
                      .+.+.++|++.+.||+|+||.||+|.+..+++.||+|++.....       ....+.+|+.+++.+    .|+|+     
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i-----  100 (312)
T 2iwi_A           26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGV-----  100 (312)
T ss_dssp             -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSB-----
T ss_pred             hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCe-----
Confidence            34667889999999999999999999999999999999875321       233455799999999    67776     


Q ss_pred             EEEceeeeeCCEEEEEEec-C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEee-cCCc
Q 024661          156 VQIRNWFDYRNHICIVFEK-L-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV-SAEY  232 (264)
Q Consensus       156 ~~~~~~~~~~~~~~lv~e~-~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~-~~~~  232 (264)
                      +++++++.+.+..++|||+ + +++|.+++....  .+++..++.++.||+.||.|||++||+|+||||+||+++ .++.
T Consensus       101 ~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~  178 (312)
T 2iwi_A          101 IRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGC  178 (312)
T ss_dssp             CCEEEEC-----CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTE
T ss_pred             eeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCe
Confidence            9999999999999999999 5 899999998765  699999999999999999999999999999999999999 7899


Q ss_pred             EEeccCCCCCcCCC----CcccceeeeeceeEe
Q 024661          233 VKVPDYKVPSPRHA----FSFQTFLSMASRVYI  261 (264)
Q Consensus       233 v~l~Dfg~a~~~~~----~~~~~~~y~ape~~~  261 (264)
                      ++|+|||++.....    ...++..|+|||++.
T Consensus       179 ~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~  211 (312)
T 2iwi_A          179 AKLIDFGSGALLHDEPYTDFDGTRVYSPPEWIS  211 (312)
T ss_dssp             EEECCCSSCEECCSSCBCCCCSCTTTSCHHHHH
T ss_pred             EEEEEcchhhhcccCcccccCCcccccCceeee
Confidence            99999999876443    234788899999754

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=4.5e-33  Score=230.98  Aligned_cols=164  Identities=20%  Similarity=0.220  Sum_probs=137.1

Q ss_pred             CCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHH--HhccCCCCcceEEEceeeee
Q 024661           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR--LARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~--l~~~~~~~~~~~~~~~~~~~  164 (264)
                      +..+.++|++.+.||+|+||.||+|.+  +++.||+|++....  ...+.+|.+++..  ++|+|+     +++++++.+
T Consensus         3 ~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l~h~ni-----v~~~~~~~~   73 (301)
T 3q4u_A            3 QRTVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRD--EKSWFRETELYNTVMLRHENI-----LGFIASDMT   73 (301)
T ss_dssp             -CCCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGG--HHHHHHHHHHHHHTCCCCTTB-----CCEEEEEEE
T ss_pred             cccccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecccc--chhhHHHHHHHHHhhccCcCe-----eeEEEeecc
Confidence            356778999999999999999999987  58889999987543  3455667777776  667776     888887544


Q ss_pred             ----CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH--------HCCCeecCCCCCCEEeecCC
Q 024661          165 ----RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH--------ELRLIHTDLKPENILLVSAE  231 (264)
Q Consensus       165 ----~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH--------~~~ivH~dikp~Nili~~~~  231 (264)
                          ...+|+||||+ +++|.+++...   .+++..++.++.||+.||.|||        ++||+||||||+|||++.++
T Consensus        74 ~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~  150 (301)
T 3q4u_A           74 SRHSSTQLWLITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNG  150 (301)
T ss_dssp             EETTEEEEEEEECCCTTCBHHHHHTTC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTS
T ss_pred             ccCCCceeEEehhhccCCCHHHHHhhc---ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCC
Confidence                45789999999 88999999653   6999999999999999999999        99999999999999999999


Q ss_pred             cEEeccCCCCCcCC----------CCcccceeeeeceeEee
Q 024661          232 YVKVPDYKVPSPRH----------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       232 ~v~l~Dfg~a~~~~----------~~~~~~~~y~ape~~~~  262 (264)
                      .+||+|||++....          ....+|..|+|||++.+
T Consensus       151 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  191 (301)
T 3q4u_A          151 QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDE  191 (301)
T ss_dssp             CEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTT
T ss_pred             CEEEeeCCCeeecccccccccccccccccccceeChhhhcC
Confidence            99999999986422          12268899999998653

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=8.2e-33  Score=229.91  Aligned_cols=168  Identities=23%  Similarity=0.373  Sum_probs=143.7

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-----hhHHHHHHHHHHHHHHhccCCCCcceEEEceee--
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF--  162 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~--  162 (264)
                      +.++|++.+.||+|+||.||+|.+..+++.+|+|+++...     .....+.+|+.+++.++|+|+     +++++++  
T Consensus         3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~   77 (305)
T 2wtk_C            3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNV-----IQLVDVLYN   77 (305)
T ss_dssp             --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTB-----CCEEEEEEC
T ss_pred             cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCe-----eEEEEEEEc
Confidence            4578999999999999999999999999999999997542     345778899999999998887     9999988  


Q ss_pred             eeCCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          163 DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       163 ~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                      .+....|+||||+.++|.+++.......+++..++.++.||+.||.|||++||+|+||||+|||++.++.++|+|||++.
T Consensus        78 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~  157 (305)
T 2wtk_C           78 EEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAE  157 (305)
T ss_dssp             C---CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             CCCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeecccccc
Confidence            44568999999996669888887665679999999999999999999999999999999999999999999999999997


Q ss_pred             cCCC--------CcccceeeeeceeEee
Q 024661          243 PRHA--------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       243 ~~~~--------~~~~~~~y~ape~~~~  262 (264)
                      ....        ...++..|+|||++.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~  185 (305)
T 2wtk_C          158 ALHPFAADDTCRTSQGSPAFQPPEIANG  185 (305)
T ss_dssp             ECCTTCSSCEECCCCSCGGGCCHHHHTC
T ss_pred             ccCccccccccccCCCCCCCcChhhccC
Confidence            6432        2347888999998643

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.9e-32  Score=228.84  Aligned_cols=167  Identities=26%  Similarity=0.372  Sum_probs=138.6

Q ss_pred             CCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceee---
Q 024661           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF---  162 (264)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~---  162 (264)
                      +..+.++|++.+.||+|+||.||+|.+..+++.||+|++... ....+.+.+|+.+++.++|+|+     +++++++   
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~   80 (320)
T 2i6l_A            6 GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNI-----VKVFEILGPS   80 (320)
T ss_dssp             CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTB-----CCEEEEECTT
T ss_pred             cCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCe-----eEEEEecccc
Confidence            456778999999999999999999999999999999998743 3455778899999999999887     8888776   


Q ss_pred             -----------eeCCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEee-cC
Q 024661          163 -----------DYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV-SA  230 (264)
Q Consensus       163 -----------~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~-~~  230 (264)
                                 .+....|+||||+.++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++ .+
T Consensus        81 ~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~  157 (320)
T 2i6l_A           81 GSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG---PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTED  157 (320)
T ss_dssp             SCBCCC----CCSCSEEEEEEECCSEEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT
T ss_pred             ccccccccccccccCceeEEeeccCCCHHHHhhcC---CccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC
Confidence                       345789999999988999998753   589999999999999999999999999999999999998 56


Q ss_pred             CcEEeccCCCCCcCCC---------CcccceeeeeceeEe
Q 024661          231 EYVKVPDYKVPSPRHA---------FSFQTFLSMASRVYI  261 (264)
Q Consensus       231 ~~v~l~Dfg~a~~~~~---------~~~~~~~y~ape~~~  261 (264)
                      +.+||+|||++.....         ...++..|+|||++.
T Consensus       158 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  197 (320)
T 2i6l_A          158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLL  197 (320)
T ss_dssp             TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHH
T ss_pred             CeEEEccCccccccCCCcccccccccccccccccCcHHhc
Confidence            7999999999976432         224577899999764

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.98  E-value=1.8e-32  Score=234.24  Aligned_cols=165  Identities=21%  Similarity=0.346  Sum_probs=142.6

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .+.++|.+.+.||+|+||.||+|.+..+|+.||+|++...   ....+.+.+|+.+++.++|+|+     +++++++...
T Consensus        39 ~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~  113 (371)
T 4exu_A           39 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV-----IGLLDVFTPA  113 (371)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTB-----CCCSEEECSC
T ss_pred             cccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCc-----hhhhhheecc
Confidence            4668899999999999999999999999999999999753   3445778899999999999888     9999999876


Q ss_pred             CEE------EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          166 NHI------CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       166 ~~~------~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                      +..      |+||||++++|.+++..    .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus       114 ~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg  189 (371)
T 4exu_A          114 SSLRNFYDFYLVMPFMQTDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFG  189 (371)
T ss_dssp             SSSTTCCCCEEEEECCCEEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred             CCcccceeEEEEEccccccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecC
Confidence            654      99999998899888743    59999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCC---CcccceeeeeceeEee
Q 024661          240 VPSPRHA---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       240 ~a~~~~~---~~~~~~~y~ape~~~~  262 (264)
                      ++.....   ...+|..|+|||++.+
T Consensus       190 ~a~~~~~~~~~~~~t~~y~aPE~~~~  215 (371)
T 4exu_A          190 LARHADAEMTGYVVTRWYRAPEVILS  215 (371)
T ss_dssp             CC--------CTTCCCTTSCHHHHSC
T ss_pred             cccccccCcCCcccCccccCHHHhcC
Confidence            9976443   3357889999998754

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.98  E-value=3e-33  Score=238.68  Aligned_cols=166  Identities=22%  Similarity=0.358  Sum_probs=129.7

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||+|++...   ....+.+.+|+.+++.++|+|+     +++++++...
T Consensus        26 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnI-----v~~~~~~~~~  100 (367)
T 2fst_X           26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV-----IGLLDVFTPA  100 (367)
T ss_dssp             EEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTB-----CCCSEEECSC
T ss_pred             CCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCC-----CcEEEEEecC
Confidence            4457899999999999999999999999999999998642   3445678899999999999887     8898888653


Q ss_pred             ------CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          166 ------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       166 ------~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                            ..+|+|||+++++|.+++...   .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus       101 ~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG  177 (367)
T 2fst_X          101 RSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG  177 (367)
T ss_dssp             SSGGGCCCCEEEEECCCEECC-----C---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC--
T ss_pred             CccccCCeEEEEecccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecc
Confidence                  568999999999999988763   69999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCC---CcccceeeeeceeEee
Q 024661          240 VPSPRHA---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       240 ~a~~~~~---~~~~~~~y~ape~~~~  262 (264)
                      +++....   ...+|..|+|||++.+
T Consensus       178 ~a~~~~~~~~~~~~t~~y~aPE~~~~  203 (367)
T 2fst_X          178 LARHTADEMTGYVATRWYRAPEIMLN  203 (367)
T ss_dssp             -------------CCCTTCCHHHHTT
T ss_pred             ccccccccCCCcCcCcCccChHHHcC
Confidence            9976443   3357889999998653

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.98  E-value=3.4e-32  Score=227.42  Aligned_cols=168  Identities=18%  Similarity=0.180  Sum_probs=142.9

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEec-hhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeee----
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS-INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD----  163 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~----  163 (264)
                      ...++|++.+.||+|+||.||+|.+..+++.||+|++.. .....+.+.+|+.+++.+.|+|+     +++++++.    
T Consensus        26 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~  100 (317)
T 2buj_A           26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNI-----LRLVAYCLRERG  100 (317)
T ss_dssp             ETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTB-----CCCCEEEEEEET
T ss_pred             ECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCe-----eeEEEEEEeccC
Confidence            345789999999999999999999999999999998864 34456778899999999988887     89988886    


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCC
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV  240 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~  240 (264)
                      .....|+||||+ +++|.+++...  ....+++..++.++.||+.||.|||++||+|+||||+|||++.++.++|+|||+
T Consensus       101 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~  180 (317)
T 2buj_A          101 AKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGS  180 (317)
T ss_dssp             TEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred             CCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCc
Confidence            345889999999 88999999863  234699999999999999999999999999999999999999999999999999


Q ss_pred             CCcCCCC---------------cccceeeeeceeEe
Q 024661          241 PSPRHAF---------------SFQTFLSMASRVYI  261 (264)
Q Consensus       241 a~~~~~~---------------~~~~~~y~ape~~~  261 (264)
                      +......               ..++..|+|||++.
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  216 (317)
T 2buj_A          181 MNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFS  216 (317)
T ss_dssp             CEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSS
T ss_pred             chhcccccccccccccccccccccCCcccCCHhHhc
Confidence            8764321               12478899999864

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.98  E-value=3e-33  Score=236.56  Aligned_cols=168  Identities=24%  Similarity=0.394  Sum_probs=143.6

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh------hhHHHHHHHHHHHHHHhccCCCCcceEEEceee
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~  162 (264)
                      .+.++|++.+.||+|+||.||+|.+..+++.+|+|++.+..      ...+.+.+|+.+++.++|+|+     +++++++
T Consensus        23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~~~~   97 (345)
T 3hko_A           23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNI-----ARLYEVY   97 (345)
T ss_dssp             HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTB-----CCEEEEE
T ss_pred             hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCc-----ceeehhh
Confidence            45678999999999999999999999999999999987532      345778899999999998887     9999999


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHHhcC--------------------------------------CCCCCHHHHHHHHHHH
Q 024661          163 DYRNHICIVFEKL-GPSLYDFLRKNS--------------------------------------YRSFPIDLVRELGRQL  203 (264)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~--------------------------------------~~~~~~~~~~~i~~qi  203 (264)
                      .+.+..|+||||+ +++|.+++....                                      ...+++..++.++.||
T Consensus        98 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi  177 (345)
T 3hko_A           98 EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQI  177 (345)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHH
T ss_pred             ccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence            9999999999999 999999985210                                      1124678899999999


Q ss_pred             HHHHHHHHHCCCeecCCCCCCEEeecCC--cEEeccCCCCCcCC----------CCcccceeeeeceeEe
Q 024661          204 LESVAFMHELRLIHTDLKPENILLVSAE--YVKVPDYKVPSPRH----------AFSFQTFLSMASRVYI  261 (264)
Q Consensus       204 ~~~l~~lH~~~ivH~dikp~Nili~~~~--~v~l~Dfg~a~~~~----------~~~~~~~~y~ape~~~  261 (264)
                      +.||+|||++||+||||||+|||++.++  .+||+|||++....          ....+|..|+|||++.
T Consensus       178 ~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  247 (345)
T 3hko_A          178 FSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLN  247 (345)
T ss_dssp             HHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHT
T ss_pred             HHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhc
Confidence            9999999999999999999999998776  89999999997532          2335788899999874

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.98  E-value=2.5e-32  Score=227.61  Aligned_cols=169  Identities=25%  Similarity=0.294  Sum_probs=138.7

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEec----hhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeee
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~  163 (264)
                      ....++|++.+.||+|+||.||+|.+..+++.||+|++..    .......+.+|+.+++.++|+|+     +++++++.
T Consensus        28 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~  102 (310)
T 2wqm_A           28 YNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNV-----IKYYASFI  102 (310)
T ss_dssp             TSSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTB-----CCEEEEEE
T ss_pred             cccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEE
Confidence            3445689999999999999999999999999999999874    23456778899999999988887     99999999


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCC
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV  240 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~  240 (264)
                      ..+..++|||++ +++|.+++...  ....+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||+
T Consensus       103 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~  182 (310)
T 2wqm_A          103 EDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL  182 (310)
T ss_dssp             ETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC--
T ss_pred             cCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccc
Confidence            999999999999 88999999742  234689999999999999999999999999999999999999999999999999


Q ss_pred             CCcCCC------CcccceeeeeceeEe
Q 024661          241 PSPRHA------FSFQTFLSMASRVYI  261 (264)
Q Consensus       241 a~~~~~------~~~~~~~y~ape~~~  261 (264)
                      +.....      ...++..|+|||++.
T Consensus       183 ~~~~~~~~~~~~~~~~~~~y~aPE~~~  209 (310)
T 2wqm_A          183 GRFFSSKTTAAHSLVGTPYYMSPERIH  209 (310)
T ss_dssp             ----------------CCSSCCHHHHT
T ss_pred             eeeecCCCccccccCCCeeEeChHHhC
Confidence            875432      234788899999753

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.98  E-value=2.3e-33  Score=235.83  Aligned_cols=177  Identities=23%  Similarity=0.356  Sum_probs=151.7

Q ss_pred             CceEEeeCCccCCCeEEE-eecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhc-cCCCCcc
Q 024661           80 GHYVFAIGENLTPRYRIL-SKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLAR-HDIGGTR  154 (264)
Q Consensus        80 ~~~~~~~~~~~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~-~~~~~~~  154 (264)
                      ....+...+.+.++|.+. +.||+|+||.||+|.+..+++.||+|++....   .....+.+|+.+++.+.+ +++    
T Consensus        16 ~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i----   91 (327)
T 3lm5_A           16 ENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRV----   91 (327)
T ss_dssp             CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTB----
T ss_pred             hhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCE----
Confidence            344566677888999998 89999999999999999999999999987532   335678899999999865 555    


Q ss_pred             eEEEceeeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec---C
Q 024661          155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS---A  230 (264)
Q Consensus       155 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~---~  230 (264)
                       +++++++.+.+.+|+||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.   +
T Consensus        92 -v~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~  170 (327)
T 3lm5_A           92 -INLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPL  170 (327)
T ss_dssp             -CCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTB
T ss_pred             -EEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCC
Confidence             99999999999999999999 889999987654457999999999999999999999999999999999999997   7


Q ss_pred             CcEEeccCCCCCcCCC-----CcccceeeeeceeEe
Q 024661          231 EYVKVPDYKVPSPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       231 ~~v~l~Dfg~a~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      +.+||+|||++.....     ...+|..|+|||++.
T Consensus       171 ~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~  206 (327)
T 3lm5_A          171 GDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILN  206 (327)
T ss_dssp             CCEEECCGGGCEEC---------CCCGGGCCHHHHT
T ss_pred             CcEEEeeCccccccCCccccccccCCcCccCCeeec
Confidence            8999999999976433     235888999999764

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.98  E-value=8e-33  Score=226.72  Aligned_cols=164  Identities=23%  Similarity=0.367  Sum_probs=145.9

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++....  ...+.+.+|+.+++.+.|+|+     +++++++.+.+..
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~   80 (276)
T 2yex_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV-----VKFYGHRREGNIQ   80 (276)
T ss_dssp             HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTB-----CCEEEEEEETTEE
T ss_pred             ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCc-----eeeeeEEEcCCEE
Confidence            367999999999999999999999999999999987433  345778899999999988887     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC--
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH--  245 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~--  245 (264)
                      |+|||++ +++|.+++....  .+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++....  
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~  158 (276)
T 2yex_A           81 YLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN  158 (276)
T ss_dssp             EEEEECCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred             EEEEEecCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence            9999999 789999887654  69999999999999999999999999999999999999999999999999986432  


Q ss_pred             ------CCcccceeeeeceeEe
Q 024661          246 ------AFSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ------~~~~~~~~y~ape~~~  261 (264)
                            ....++..|+|||++.
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~  180 (276)
T 2yex_A          159 NRERLLNKMCGTLPYVAPELLK  180 (276)
T ss_dssp             TEECCBCCCCSCGGGCCGGGGT
T ss_pred             cchhcccCCccccCccChHHHh
Confidence                  2335788899999864

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.98  E-value=2.6e-32  Score=225.78  Aligned_cols=168  Identities=26%  Similarity=0.316  Sum_probs=138.4

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++.... ..+.+.+|+.+++.+.|+++    +..+..++...+..
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~----i~~~~~~~~~~~~~   80 (296)
T 4hgt_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVG----IPTIRWCGAEGDYN   80 (296)
T ss_dssp             -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTT----CCCEEEEEEETTEE
T ss_pred             ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHhcCCCC----CCeeeeecCCCCce
Confidence            45688999999999999999999999999999999876433 23457889999999999875    23444555778899


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEe---ecCCcEEeccCCCCCcCC
Q 024661          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL---VSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili---~~~~~v~l~Dfg~a~~~~  245 (264)
                      ++|||+++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++....
T Consensus        81 ~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~  159 (296)
T 4hgt_A           81 VMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             EEEEECCCCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             EEEEEccCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence            9999999999999998543 369999999999999999999999999999999999999   788999999999997532


Q ss_pred             C-------------CcccceeeeeceeEee
Q 024661          246 A-------------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~-------------~~~~~~~y~ape~~~~  262 (264)
                      .             ...+|..|+|||++.+
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  189 (296)
T 4hgt_A          160 DARTHQHIPYRENKNLTGTARYASINTHLG  189 (296)
T ss_dssp             CTTTCCBCCCCCSCCCCSCGGGCCHHHHTT
T ss_pred             CcccCccCCCCcccccCCCccccchHHhcC
Confidence            2             3357889999998643

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.98  E-value=6.9e-33  Score=232.34  Aligned_cols=166  Identities=30%  Similarity=0.438  Sum_probs=141.6

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---------hhHHHHHHHHHHHHHHhccCCCCcceEEE
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------KYREAAMIEIDVLQRLARHDIGGTRCVQI  158 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~e~~~l~~l~~~~~~~~~~~~~  158 (264)
                      ..+.++|++.+.||+|+||.||+|.+..+++.||+|++....         .....+.+|+++++.+.|+|+     +++
T Consensus         6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~   80 (322)
T 2ycf_A            6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI-----IKI   80 (322)
T ss_dssp             HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTB-----CCE
T ss_pred             hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCC-----ceE
Confidence            345678999999999999999999999999999999986432         123457889999999999887     889


Q ss_pred             ceeeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCc---EE
Q 024661          159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY---VK  234 (264)
Q Consensus       159 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~---v~  234 (264)
                      ++++..+. .|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.   +|
T Consensus        81 ~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~k  157 (322)
T 2ycf_A           81 KNFFDAED-YYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIK  157 (322)
T ss_dssp             EEEEESSS-EEEEEECCTTEETHHHHSTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEE
T ss_pred             eeEEcCCc-eEEEEecCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEE
Confidence            99887665 89999999 889999987654  7999999999999999999999999999999999999987664   99


Q ss_pred             eccCCCCCcCCCC-----cccceeeeeceeEe
Q 024661          235 VPDYKVPSPRHAF-----SFQTFLSMASRVYI  261 (264)
Q Consensus       235 l~Dfg~a~~~~~~-----~~~~~~y~ape~~~  261 (264)
                      |+|||++......     ..+|..|+|||++.
T Consensus       158 l~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~  189 (322)
T 2ycf_A          158 ITDFGHSKILGETSLMRTLCGTPTYLAPEVLV  189 (322)
T ss_dssp             ECCCTTCEECCCCHHHHHHHSCCTTCCHHHHH
T ss_pred             EccCccceecccccccccccCCcCccCchhhc
Confidence            9999999765443     24788999999863

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.98  E-value=2.2e-32  Score=223.06  Aligned_cols=163  Identities=24%  Similarity=0.320  Sum_probs=144.8

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      ++|++.+.||+|+||.||+|.+. +++.||+|++.......+.+.+|+++++.++|+|+     +++++++.+.+..|+|
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~~~lv   81 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKL-----VQLYGVCLEQAPICLV   81 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTB-----CCEEEEECSSSSCEEE
T ss_pred             hheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCE-----eeEEEEEccCCCeEEE
Confidence            67999999999999999999986 56789999998766666788999999999988887     9999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC----
Q 024661          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA----  246 (264)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~----  246 (264)
                      ||++ +++|.+++.... ..+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.....    
T Consensus        82 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~  160 (267)
T 3t9t_A           82 TEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT  160 (267)
T ss_dssp             ECCCTTCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred             EeCCCCCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccccccc
Confidence            9999 889999998754 3689999999999999999999999999999999999999999999999999975432    


Q ss_pred             ---CcccceeeeeceeEe
Q 024661          247 ---FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~  261 (264)
                         ...++..|+|||++.
T Consensus       161 ~~~~~~~~~~y~aPE~~~  178 (267)
T 3t9t_A          161 SSTGTKFPVKWASPEVFS  178 (267)
T ss_dssp             STTSTTCCGGGCCHHHHH
T ss_pred             ccccccccccccChhhhc
Confidence               234566799999764

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.98  E-value=1e-32  Score=235.70  Aligned_cols=164  Identities=13%  Similarity=0.080  Sum_probs=128.9

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEec----hhhhHHHHHHHHHHHHHHh--ccCCCCcceEEEc------
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS----INKYREAAMIEIDVLQRLA--RHDIGGTRCVQIR------  159 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~e~~~l~~l~--~~~~~~~~~~~~~------  159 (264)
                      ..|++.+.||+|+||.||+|.+..+++.||+|++..    .....+.+.+|+.+++.+.  |+|+     ++++      
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~i-----v~~~~~~~~p  136 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEE-----ARDRRRLLLP  136 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC---------------CBCCC
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhh-----hhhceeEEee
Confidence            349999999999999999999999999999999986    3345667788877777776  6665     5533      


Q ss_pred             -eeeeeC-----------------CEEEEEEecCCCCHHHHHHhcCCCCCCHHHH------HHHHHHHHHHHHHHHHCCC
Q 024661          160 -NWFDYR-----------------NHICIVFEKLGPSLYDFLRKNSYRSFPIDLV------RELGRQLLESVAFMHELRL  215 (264)
Q Consensus       160 -~~~~~~-----------------~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~------~~i~~qi~~~l~~lH~~~i  215 (264)
                       +.+...                 ..+|+||||+.++|.+++.... ..+.+...      +.++.||+.||+|||++||
T Consensus       137 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~i  215 (371)
T 3q60_A          137 SDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSKGL  215 (371)
T ss_dssp             CEEEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             ehheecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHCCC
Confidence             444332                 4489999999999999998642 13444444      6777999999999999999


Q ss_pred             eecCCCCCCEEeecCCcEEeccCCCCCcCCCC---cccceeeeeceeEe
Q 024661          216 IHTDLKPENILLVSAEYVKVPDYKVPSPRHAF---SFQTFLSMASRVYI  261 (264)
Q Consensus       216 vH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~---~~~~~~y~ape~~~  261 (264)
                      +||||||+|||++.++.+||+|||+|+.....   ..+|..|||||++.
T Consensus       216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~  264 (371)
T 3q60_A          216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLN  264 (371)
T ss_dssp             EETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHT
T ss_pred             ccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhcc
Confidence            99999999999999999999999999875543   35678899999864

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.98  E-value=1.6e-32  Score=228.96  Aligned_cols=167  Identities=20%  Similarity=0.305  Sum_probs=143.6

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeC-----CCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceee
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~  162 (264)
                      ..++|.+.+.||+|+||.||+|.+.     .+++.||+|+++..  ....+.+.+|+.+++.++|+|+     +++++++
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~   95 (314)
T 2ivs_A           21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV-----IKLYGAC   95 (314)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEE
T ss_pred             chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCce-----eeEEEEE
Confidence            3477999999999999999999873     45588999998743  3445778899999999988887     9999999


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHHhcCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecC
Q 024661          163 DYRNHICIVFEKL-GPSLYDFLRKNSY----------------------RSFPIDLVRELGRQLLESVAFMHELRLIHTD  219 (264)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~----------------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~d  219 (264)
                      .+.+..|+||||+ +++|.+++.....                      ..+++..++.++.||+.||.|||++||+|||
T Consensus        96 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~d  175 (314)
T 2ivs_A           96 SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRD  175 (314)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             ecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccc
Confidence            9999999999999 8999999987542                      2389999999999999999999999999999


Q ss_pred             CCCCCEEeecCCcEEeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          220 LKPENILLVSAEYVKVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       220 ikp~Nili~~~~~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      |||+|||++.++.+||+|||++.....        ...++..|+|||++.
T Consensus       176 ikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  225 (314)
T 2ivs_A          176 LAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLF  225 (314)
T ss_dssp             CSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHH
T ss_pred             cchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhc
Confidence            999999999999999999999975422        223566799999753

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.98  E-value=3.2e-32  Score=232.51  Aligned_cols=172  Identities=33%  Similarity=0.490  Sum_probs=147.8

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCC------CCcceEEEceeee
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDI------GGTRCVQIRNWFD  163 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~------~~~~~~~~~~~~~  163 (264)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|++.......+.+.+|+.+++.+.+.+.      .|++++++++++.
T Consensus        17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           17 KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             cCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            3468999999999999999999999999999999998776677888999999999985431      1344599999988


Q ss_pred             eCC----EEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEeecC------Cc
Q 024661          164 YRN----HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSA------EY  232 (264)
Q Consensus       164 ~~~----~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~Nili~~~------~~  232 (264)
                      ..+    .+++|||+++++|.+++.......+++..++.++.||+.||.|||++ ||+||||||+|||++.+      +.
T Consensus        97 ~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~  176 (373)
T 1q8y_A           97 HKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQ  176 (373)
T ss_dssp             EEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred             ccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcce
Confidence            754    89999999999999999986655799999999999999999999998 99999999999999643      38


Q ss_pred             EEeccCCCCCcCCC---CcccceeeeeceeEe
Q 024661          233 VKVPDYKVPSPRHA---FSFQTFLSMASRVYI  261 (264)
Q Consensus       233 v~l~Dfg~a~~~~~---~~~~~~~y~ape~~~  261 (264)
                      +||+|||++.....   ...+|..|+|||++.
T Consensus       177 ~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~  208 (373)
T 1q8y_A          177 IKIADLGNACWYDEHYTNSIQTREYRSPEVLL  208 (373)
T ss_dssp             EEECCCTTCEETTBCCCSCCSCGGGCCHHHHH
T ss_pred             EEEcccccccccCCCCCCCCCCccccCcHHHh
Confidence            99999999975432   346889999999864

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.98  E-value=2.3e-32  Score=225.57  Aligned_cols=167  Identities=17%  Similarity=0.239  Sum_probs=132.2

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      ...++|++.+.||+|+||.||+|.+..+++.||+|+++...   ...+.+.++...++.+.|+|+     +++++++.+.
T Consensus         4 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i-----v~~~~~~~~~   78 (290)
T 3fme_A            4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFT-----VTFYGALFRE   78 (290)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEEECS
T ss_pred             ccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeE-----EEEeeeeecc
Confidence            44578999999999999999999999999999999987432   222333334444555666665     9999999999


Q ss_pred             CEEEEEEecCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          166 NHICIVFEKLGPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       166 ~~~~lv~e~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                      +..|+||||+.++|.+++...  ....+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus        79 ~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  158 (290)
T 3fme_A           79 GDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISG  158 (290)
T ss_dssp             SSEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC----
T ss_pred             CCEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcc
Confidence            999999999988998887642  234799999999999999999999998 99999999999999999999999999997


Q ss_pred             cCCC-----CcccceeeeeceeE
Q 024661          243 PRHA-----FSFQTFLSMASRVY  260 (264)
Q Consensus       243 ~~~~-----~~~~~~~y~ape~~  260 (264)
                      ....     ...+|..|+|||++
T Consensus       159 ~~~~~~~~~~~~~t~~y~aPE~~  181 (290)
T 3fme_A          159 YLVDDVAKDIDAGCKPYMAPERI  181 (290)
T ss_dssp             -----------CCCCCCSCHHHH
T ss_pred             cccccccccccCCCccccChhhc
Confidence            5332     23588899999985

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.98  E-value=2.3e-32  Score=239.23  Aligned_cols=163  Identities=21%  Similarity=0.300  Sum_probs=141.6

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC-EEE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN-HIC  169 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~~  169 (264)
                      .++|++.+.||+|+||.||+|.+.  ++.||||+++... ..+.+.+|+.+++.++|+|+     +++++++.... .+|
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~~~~~~~  263 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNL-----VQLLGVIVEEKGGLY  263 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTB-----CCEEEEEECTTSCEE
T ss_pred             hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCE-----EEEEEEEEcCCCceE
Confidence            467999999999999999999886  6789999997543 55778999999999999888     99999876654 899


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC--
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA--  246 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~--  246 (264)
                      +||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....  
T Consensus       264 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~  343 (450)
T 1k9a_A          264 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ  343 (450)
T ss_dssp             EEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc
Confidence            999999 89999999977644589999999999999999999999999999999999999999999999999975432  


Q ss_pred             -CcccceeeeeceeEe
Q 024661          247 -FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 -~~~~~~~y~ape~~~  261 (264)
                       ...++..|||||++.
T Consensus       344 ~~~~~~~~y~aPE~~~  359 (450)
T 1k9a_A          344 DTGKLPVKWTAPEALR  359 (450)
T ss_dssp             ---CCCTTTSCHHHHH
T ss_pred             cCCCCCcceeCHHHhc
Confidence             224567799999764

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.98  E-value=1.8e-32  Score=229.73  Aligned_cols=172  Identities=22%  Similarity=0.326  Sum_probs=146.1

Q ss_pred             EEeeCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh-------hHHHHHHHHHHHHHHhc--cCCCCc
Q 024661           83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK-------YREAAMIEIDVLQRLAR--HDIGGT  153 (264)
Q Consensus        83 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~e~~~l~~l~~--~~~~~~  153 (264)
                      +...++.+.++|++.+.||+|+||.||+|.+..+++.||+|++.....       ..+.+.+|+.+++.+.+  +++   
T Consensus        34 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i---  110 (320)
T 3a99_A           34 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV---  110 (320)
T ss_dssp             ------CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSB---
T ss_pred             cccccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCc---
Confidence            345567788999999999999999999999999999999999975431       22456779999999976  555   


Q ss_pred             ceEEEceeeeeCCEEEEEEecC-C-CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEee-cC
Q 024661          154 RCVQIRNWFDYRNHICIVFEKL-G-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV-SA  230 (264)
Q Consensus       154 ~~~~~~~~~~~~~~~~lv~e~~-~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~-~~  230 (264)
                        +++++++.+.+..++|||++ + ++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++ .+
T Consensus       111 --~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~  186 (320)
T 3a99_A          111 --IRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR  186 (320)
T ss_dssp             --CCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTT
T ss_pred             --eEEEEEEecCCcEEEEEEcCCCCccHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCC
Confidence              99999999999999999999 4 89999998765  799999999999999999999999999999999999999 78


Q ss_pred             CcEEeccCCCCCcCCC----CcccceeeeeceeEe
Q 024661          231 EYVKVPDYKVPSPRHA----FSFQTFLSMASRVYI  261 (264)
Q Consensus       231 ~~v~l~Dfg~a~~~~~----~~~~~~~y~ape~~~  261 (264)
                      +.+||+|||++.....    ...+|..|+|||++.
T Consensus       187 ~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~  221 (320)
T 3a99_A          187 GELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIR  221 (320)
T ss_dssp             TEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHH
T ss_pred             CCEEEeeCccccccccccccCCCCCccCCChHHhc
Confidence            9999999999876443    235788999999764

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.98  E-value=7e-32  Score=223.26  Aligned_cols=168  Identities=26%  Similarity=0.312  Sum_probs=142.6

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++.... ..+.+.+|+.+++.+.|+++    +..+..++......
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~----i~~~~~~~~~~~~~   80 (296)
T 3uzp_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVG----IPTIRWCGAEGDYN   80 (296)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHHTTSTT----CCCEEEEEEETTEE
T ss_pred             eeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHhhcCCC----CCccccccCCCCce
Confidence            56688999999999999999999999999999999987533 23467889999999999875    13344455678899


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEee---cCCcEEeccCCCCCcCC
Q 024661          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV---SAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~---~~~~v~l~Dfg~a~~~~  245 (264)
                      ++||||++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||++....
T Consensus        81 ~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~  159 (296)
T 3uzp_A           81 VMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             EEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             EEEEEecCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence            9999999999999998543 4699999999999999999999999999999999999994   88999999999997533


Q ss_pred             -------------CCcccceeeeeceeEee
Q 024661          246 -------------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 -------------~~~~~~~~y~ape~~~~  262 (264)
                                   ....+|..|+|||++.+
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  189 (296)
T 3uzp_A          160 DARTHQHIPYRENKNLTGTARYASINTHLG  189 (296)
T ss_dssp             CTTTCCBCCCCCSCCCCSCTTTCCHHHHTT
T ss_pred             ccccccccccccccccccccccCChhhhcC
Confidence                         23357888999998653

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=6.8e-33  Score=233.44  Aligned_cols=166  Identities=17%  Similarity=0.243  Sum_probs=138.5

Q ss_pred             eeCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHH--hccCCCCcceEEEceee
Q 024661           85 AIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL--ARHDIGGTRCVQIRNWF  162 (264)
Q Consensus        85 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l--~~~~~~~~~~~~~~~~~  162 (264)
                      ..+..+.++|++.+.||+|+||.||+|.+.  ++.||+|++.....  ....+|.+++..+  .|+|+     +++++++
T Consensus        30 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~--~~~~~e~~~~~~~~~~h~~i-----~~~~~~~  100 (337)
T 3mdy_A           30 LVQRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTEE--ASWFRETEIYQTVLMRHENI-----LGFIAAD  100 (337)
T ss_dssp             HHHTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGGH--HHHHHHHHHHTSTTCCCTTB-----CCEEEEE
T ss_pred             ccccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecccc--chhhhHHHHHHHHhhcCCCe-----eeEEEEE
Confidence            345567788999999999999999999886  88999999875443  3344455555443  56665     9999998


Q ss_pred             eeC----CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeecCCCCCCEEeec
Q 024661          163 DYR----NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL--------RLIHTDLKPENILLVS  229 (264)
Q Consensus       163 ~~~----~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~ivH~dikp~Nili~~  229 (264)
                      ...    ..+|+||||+ +++|.+++...   .+++..++.++.|++.||.|||++        ||+||||||+|||++.
T Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~  177 (337)
T 3mdy_A          101 IKGTGSWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKK  177 (337)
T ss_dssp             EESCGGGCEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECT
T ss_pred             ccCCCCCCceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECC
Confidence            886    7899999999 88999999765   599999999999999999999998        9999999999999999


Q ss_pred             CCcEEeccCCCCCcCCC----------CcccceeeeeceeEee
Q 024661          230 AEYVKVPDYKVPSPRHA----------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       230 ~~~v~l~Dfg~a~~~~~----------~~~~~~~y~ape~~~~  262 (264)
                      ++.+||+|||++.....          ...+|..|+|||++.+
T Consensus       178 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  220 (337)
T 3mdy_A          178 NGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDE  220 (337)
T ss_dssp             TSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTT
T ss_pred             CCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhccc
Confidence            99999999999964321          3358899999998643

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.98  E-value=1.1e-33  Score=242.30  Aligned_cols=167  Identities=16%  Similarity=0.101  Sum_probs=133.7

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech----hhhHHHHHHHHHHHHHHhccCCCCcceEEEc------
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIR------  159 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~------  159 (264)
                      ..++|++.+.||+|+||.||+|.+..+|+.||||++...    ....+.+.+|+.+++.+..  +.|+++++++      
T Consensus        71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~--l~hpniv~~~~~~~~~  148 (377)
T 3byv_A           71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG--IKNQKQAKVHLRFIFP  148 (377)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTT--CCSHHHHHHHHCBCCC
T ss_pred             CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccc--cCCHHHHHHHhhhhhh
Confidence            357899999999999999999999999999999998732    3345778899955554431  1224448877      


Q ss_pred             -eeeeeCC-----------------EEEEEEecCCCCHHHHHHhcCCCCCC-------HHHHHHHHHHHHHHHHHHHHCC
Q 024661          160 -NWFDYRN-----------------HICIVFEKLGPSLYDFLRKNSYRSFP-------IDLVRELGRQLLESVAFMHELR  214 (264)
Q Consensus       160 -~~~~~~~-----------------~~~lv~e~~~~~L~~~l~~~~~~~~~-------~~~~~~i~~qi~~~l~~lH~~~  214 (264)
                       +++.+.+                 ..|+||||++|+|.+++....  .++       +..++.|+.||+.||+|||++|
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~--~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  226 (377)
T 3byv_A          149 FDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLL--SHSSTHKSLVHHARLQLTLQVIRLLASLHHYG  226 (377)
T ss_dssp             SEEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHH--HTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhcc--ccccccccccHHHHHHHHHHHHHHHHHHHhCC
Confidence             5555443                 389999999889999998653  344       4788889999999999999999


Q ss_pred             CeecCCCCCCEEeecCCcEEeccCCCCCcCCC---CcccceeeeeceeEe
Q 024661          215 LIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---FSFQTFLSMASRVYI  261 (264)
Q Consensus       215 ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---~~~~~~~y~ape~~~  261 (264)
                      |+||||||+|||++.++.+||+|||+|+....   ...+ ..|||||++.
T Consensus       227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~  275 (377)
T 3byv_A          227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEA  275 (377)
T ss_dssp             EECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHH
T ss_pred             eecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhc
Confidence            99999999999999999999999999986443   2345 8899999864

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.98  E-value=1.7e-32  Score=225.64  Aligned_cols=167  Identities=23%  Similarity=0.282  Sum_probs=134.4

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCC---CcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceee
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF  162 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~  162 (264)
                      +...++|++.+.||+|+||.||+|.+..+   +..+|+|++...  ....+.+.+|+.+++.+.|+|+     +++++++
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~   85 (281)
T 1mp8_A           11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI-----VKLIGVI   85 (281)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTB-----CCEEEEE
T ss_pred             EEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCcc-----ceEEEEE
Confidence            34557899999999999999999998654   456999987642  3445678899999999988887     8999887


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCC
Q 024661          163 DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVP  241 (264)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a  241 (264)
                      . ++..|+||||+ +++|.+++.... ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus        86 ~-~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~  163 (281)
T 1mp8_A           86 T-ENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS  163 (281)
T ss_dssp             C-SSSCEEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC----
T ss_pred             c-cCccEEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccc
Confidence            4 56789999999 889999998654 46999999999999999999999999999999999999999999999999999


Q ss_pred             CcCCCC-------cccceeeeeceeEe
Q 024661          242 SPRHAF-------SFQTFLSMASRVYI  261 (264)
Q Consensus       242 ~~~~~~-------~~~~~~y~ape~~~  261 (264)
                      ......       ..++..|+|||++.
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~  190 (281)
T 1mp8_A          164 RYMEDSTYYKASKGKLPIKWMAPESIN  190 (281)
T ss_dssp             ---------------CCGGGCCHHHHH
T ss_pred             cccCcccccccccCCCcccccChhhcc
Confidence            764332       23456799999764

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.98  E-value=2.5e-32  Score=240.27  Aligned_cols=169  Identities=24%  Similarity=0.327  Sum_probs=143.8

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ..+.++|++.++||+|+||.||+|.+..+++.||||++..... ...+.+|+++++.+.|++.    +..+..++...+.
T Consensus         3 ~~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~il~~L~~~~~----i~~i~~~~~~~~~   77 (483)
T 3sv0_A            3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLLYESKIYRILQGGTG----IPNVRWFGVEGDY   77 (483)
T ss_dssp             CEETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-SCCHHHHHHHHHHTTTSTT----CCCEEEEEEETTE
T ss_pred             CCcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-cHHHHHHHHHHHHhcCCCC----CCeEEEEEeeCCE
Confidence            3567899999999999999999999999999999998874332 3457889999999998654    2445566677889


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEe---ecCCcEEeccCCCCCcC
Q 024661          168 ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL---VSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       168 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili---~~~~~v~l~Dfg~a~~~  244 (264)
                      .||||||++++|.+++.... ..+++..++.|+.||+.||+|||++||+||||||+||||   +.++.+||+|||++...
T Consensus        78 ~~lvme~~g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~  156 (483)
T 3sv0_A           78 NVLVMDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKY  156 (483)
T ss_dssp             EEEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred             EEEEEECCCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceec
Confidence            99999999999999998643 469999999999999999999999999999999999999   58899999999999753


Q ss_pred             CC-------------CcccceeeeeceeEee
Q 024661          245 HA-------------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       245 ~~-------------~~~~~~~y~ape~~~~  262 (264)
                      ..             ...+|..|+|||++.+
T Consensus       157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~  187 (483)
T 3sv0_A          157 RDTSTHQHIPYRENKNLTGTARYASVNTHLG  187 (483)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT
T ss_pred             cCCccccccccccccccCCCccccCHHHhcC
Confidence            32             3357889999998654

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=2.6e-32  Score=230.72  Aligned_cols=167  Identities=20%  Similarity=0.304  Sum_probs=141.0

Q ss_pred             cCCCeEEEeecccCccEEEEEEEe-----CCCCcEEEEEEEech--hhhHHHHHHHHHHHHHH-hccCCCCcceEEEcee
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFD-----NEKKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNW  161 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~  161 (264)
                      ..++|++.+.||+|+||.||+|.+     ..++..||+|++...  ....+.+.+|+.+++.+ .|+|+     ++++++
T Consensus        43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~i-----v~~~~~  117 (344)
T 1rjb_A           43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI-----VNLLGA  117 (344)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTB-----CCEEEE
T ss_pred             CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCe-----eeEEEE
Confidence            346899999999999999999997     345678999998743  23457788999999999 78887     999999


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHHhcCC---------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecC
Q 024661          162 FDYRNHICIVFEKL-GPSLYDFLRKNSY---------------------RSFPIDLVRELGRQLLESVAFMHELRLIHTD  219 (264)
Q Consensus       162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~---------------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~d  219 (264)
                      +.+.+..|+||||+ +++|.+++.....                     ..+++..++.++.||+.||.|||++||+|||
T Consensus       118 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~D  197 (344)
T 1rjb_A          118 CTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRD  197 (344)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred             EeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            99999999999999 8999999986532                     2378999999999999999999999999999


Q ss_pred             CCCCCEEeecCCcEEeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          220 LKPENILLVSAEYVKVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       220 ikp~Nili~~~~~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      |||+|||++.++.+||+|||++.....        ...+|..|+|||++.
T Consensus       198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~  247 (344)
T 1rjb_A          198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF  247 (344)
T ss_dssp             CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHH
T ss_pred             CChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhc
Confidence            999999999999999999999975432        223456799999753

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.98  E-value=3.9e-32  Score=226.53  Aligned_cols=167  Identities=25%  Similarity=0.320  Sum_probs=144.2

Q ss_pred             cCCCeEEEeecccCccEEEEEEEe-----CCCCcEEEEEEEechh--hhHHHHHHHHHHHHHH-hccCCCCcceEEEcee
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFD-----NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNW  161 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~  161 (264)
                      ..++|++.+.||+|+||.||+|.+     ..+++.||+|+++...  ...+.+.+|+.+++.+ .|+|+     ++++++
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----~~~~~~   95 (313)
T 1t46_A           21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI-----VNLLGA   95 (313)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTB-----CCEEEE
T ss_pred             ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCe-----eeEEEE
Confidence            346899999999999999999985     4567899999997532  3457789999999999 88887     999999


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHHhcCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 024661          162 FDYRNHICIVFEKL-GPSLYDFLRKNSY----------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPEN  224 (264)
Q Consensus       162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~N  224 (264)
                      +.+.+..++||||+ +++|.+++.....                ..+++..++.++.||+.||.|||++||+|+||||+|
T Consensus        96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N  175 (313)
T 1t46_A           96 CTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN  175 (313)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred             EecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccce
Confidence            99999999999999 8899999986542                248999999999999999999999999999999999


Q ss_pred             EEeecCCcEEeccCCCCCcCCCC--------cccceeeeeceeEe
Q 024661          225 ILLVSAEYVKVPDYKVPSPRHAF--------SFQTFLSMASRVYI  261 (264)
Q Consensus       225 ili~~~~~v~l~Dfg~a~~~~~~--------~~~~~~y~ape~~~  261 (264)
                      ||++.++.+||+|||++......        ..++..|+|||++.
T Consensus       176 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  220 (313)
T 1t46_A          176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF  220 (313)
T ss_dssp             EEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHH
T ss_pred             EEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhc
Confidence            99999999999999999764332        23456799999753

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.98  E-value=9.9e-33  Score=241.83  Aligned_cols=166  Identities=24%  Similarity=0.334  Sum_probs=143.7

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ...++|++.+.||+|+||.||+|.+. .+..||||+++......+.+.+|+.+++.++|+|+     +++++++. .+.+
T Consensus       185 i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~l~~~~~-~~~~  257 (454)
T 1qcf_A          185 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKL-----VKLHAVVT-KEPI  257 (454)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTB-----CCEEEEEC-SSSC
T ss_pred             echHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCE-----eeEEEEEe-CCcc
Confidence            44577999999999999999999986 46779999998766667889999999999999887     88888876 5678


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-  246 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-  246 (264)
                      |+||||+ +|+|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.... 
T Consensus       258 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~  337 (454)
T 1qcf_A          258 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN  337 (454)
T ss_dssp             EEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH
T ss_pred             EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC
Confidence            9999999 89999999865333688999999999999999999999999999999999999999999999999986432 


Q ss_pred             ------CcccceeeeeceeEe
Q 024661          247 ------FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ------~~~~~~~y~ape~~~  261 (264)
                            ...++..|+|||++.
T Consensus       338 ~~~~~~~~~~~~~y~aPE~~~  358 (454)
T 1qcf_A          338 EYTAREGAKFPIKWTAPEAIN  358 (454)
T ss_dssp             HHHTTCSSSSCGGGSCHHHHH
T ss_pred             ceeccCCCcccccccCHHHhc
Confidence                  223456799999763

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.98  E-value=5.1e-32  Score=225.06  Aligned_cols=164  Identities=27%  Similarity=0.377  Sum_probs=146.0

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|++...  ....+.+.+|+.+++.+.|+++     +++++++.+...
T Consensus        20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~   94 (303)
T 3a7i_A           20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYV-----TKYYGSYLKDTK   94 (303)
T ss_dssp             GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTB-----CCEEEEEEETTE
T ss_pred             hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCE-----eEEEEEEecCCe
Confidence            346799999999999999999999999999999999754  2445788999999999988887     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      .|+||||+ +++|.+++...   .+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.....
T Consensus        95 ~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~  171 (303)
T 3a7i_A           95 LWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD  171 (303)
T ss_dssp             EEEEEECCTTEEHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred             EEEEEEeCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCc
Confidence            99999999 88999998753   599999999999999999999999999999999999999999999999999965332


Q ss_pred             ------CcccceeeeeceeEe
Q 024661          247 ------FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ------~~~~~~~y~ape~~~  261 (264)
                            ...++..|+|||++.
T Consensus       172 ~~~~~~~~~~~~~y~aPE~~~  192 (303)
T 3a7i_A          172 TQIKRNTFVGTPFWMAPEVIK  192 (303)
T ss_dssp             TBCCBCCCCSCGGGCCHHHHT
T ss_pred             cccccCccCCCcCccCHHHHh
Confidence                  335788899999864

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.98  E-value=4e-33  Score=233.70  Aligned_cols=168  Identities=21%  Similarity=0.257  Sum_probs=144.8

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      ....++|++.+.||+|+||.||+|.+. +++.||+|++... ....+.+.+|+.+++.++|+|+     +++++++.+.+
T Consensus        35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~  108 (321)
T 2qkw_B           35 EEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHL-----VSLIGFCDERN  108 (321)
T ss_dssp             CCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTB-----CCEEEECCCTT
T ss_pred             HHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEcCCC
Confidence            456688999999999999999999964 6889999988643 3445678899999999988887     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          167 HICIVFEKL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      ..|+||||+ +++|.+++....  ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus       109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~  188 (321)
T 2qkw_B          109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKK  188 (321)
T ss_dssp             CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEE
T ss_pred             eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccc
Confidence            999999999 899999987543  23589999999999999999999999999999999999999999999999999875


Q ss_pred             CCC--------CcccceeeeeceeEe
Q 024661          244 RHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~--------~~~~~~~y~ape~~~  261 (264)
                      ...        ...+|..|+|||++.
T Consensus       189 ~~~~~~~~~~~~~~gt~~y~aPE~~~  214 (321)
T 2qkw_B          189 GTELDQTHLSTVVKGTLGYIDPEYFI  214 (321)
T ss_dssp             CSSSSCCCCBCCCEEETTTCCHHHHH
T ss_pred             cccccccccccccCCCccccCHHHhc
Confidence            322        224788899999763

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.98  E-value=1.2e-32  Score=228.60  Aligned_cols=170  Identities=24%  Similarity=0.388  Sum_probs=144.9

Q ss_pred             eCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        86 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ......++|++.+.||+|+||.||+|.+..+++.+|+|++... ....+.+.+|+.+++.+.|+|+     +++++++.+
T Consensus        13 ~~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~   87 (302)
T 2j7t_A           13 RDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI-----VKLLGAYYH   87 (302)
T ss_dssp             SSSCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTB-----CCEEEEEEC
T ss_pred             cccCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCE-----eeeeeeeee
Confidence            3445668899999999999999999999999999999998743 3345778899999999998887     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      .+..|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++|++|+||||+|||++.++.++|+|||++..
T Consensus        88 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  166 (302)
T 2j7t_A           88 DGKLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK  166 (302)
T ss_dssp             C-CEEEEEECCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHH
T ss_pred             CCeEEEEEEeCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCcc
Confidence            99999999999 889999987643 3699999999999999999999999999999999999999999999999998743


Q ss_pred             ------CCCCcccceeeeeceeEe
Q 024661          244 ------RHAFSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ------~~~~~~~~~~y~ape~~~  261 (264)
                            ......++..|+|||++.
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~  190 (302)
T 2j7t_A          167 NLKTLQKRDSFIGTPYWMAPEVVM  190 (302)
T ss_dssp             HHHHHHC-----CCGGGCCHHHHH
T ss_pred             ccccccccccccCChhhcCCeeec
Confidence                  223446888999999863

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.98  E-value=4e-32  Score=228.84  Aligned_cols=167  Identities=18%  Similarity=0.284  Sum_probs=141.9

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeC-------CCCcEEEEEEEech--hhhHHHHHHHHHHHHHH-hccCCCCcceEEEc
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDN-------EKKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIR  159 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~-------~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~  159 (264)
                      ..++|++.+.||+|+||.||+|.+.       .++..||+|+++..  ....+.+.+|+.+++.+ .|+|+     ++++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~i-----v~~~  107 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNI-----INLL  107 (334)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTB-----CCEE
T ss_pred             CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCE-----eeEE
Confidence            3478999999999999999999975       35678999998753  34456788999999999 78877     9999


Q ss_pred             eeeeeCCEEEEEEecC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCC
Q 024661          160 NWFDYRNHICIVFEKL-GPSLYDFLRKNSY--------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPEN  224 (264)
Q Consensus       160 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~--------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~N  224 (264)
                      +++.+.+.+|+||||+ +++|.+++.....              ..+++..++.++.||+.||.|||++||+|+||||+|
T Consensus       108 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N  187 (334)
T 2pvf_A          108 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN  187 (334)
T ss_dssp             EEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             EEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccce
Confidence            9999999999999999 8899999986531              248999999999999999999999999999999999


Q ss_pred             EEeecCCcEEeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          225 ILLVSAEYVKVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       225 ili~~~~~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      ||++.++.+||+|||++.....        ...++..|+|||++.
T Consensus       188 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  232 (334)
T 2pvf_A          188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALF  232 (334)
T ss_dssp             EEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHH
T ss_pred             EEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhc
Confidence            9999999999999999975432        223566799999753

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.98  E-value=9.2e-32  Score=222.17  Aligned_cols=164  Identities=25%  Similarity=0.362  Sum_probs=143.6

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee---
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY---  164 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~---  164 (264)
                      ...|++.+.||+|+||.||+|.+..++..|++|++...   ....+.+.+|+.+++.+.|+|+     +++++++..   
T Consensus        25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~   99 (290)
T 1t4h_A           25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI-----VRFYDSWESTVK   99 (290)
T ss_dssp             SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEEEEESS
T ss_pred             ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCe-----eeeeeeeccccC
Confidence            35589999999999999999999999999999998743   3455778899999999998887     889888765   


Q ss_pred             -CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEee-cCCcEEeccCC
Q 024661          165 -RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLV-SAEYVKVPDYK  239 (264)
Q Consensus       165 -~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dikp~Nili~-~~~~v~l~Dfg  239 (264)
                       ...+|+||||+ +++|.+++....  .+++..++.++.||+.||.|||++|  |+|+||||+|||++ .++.+||+|||
T Consensus       100 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg  177 (290)
T 1t4h_A          100 GKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLG  177 (290)
T ss_dssp             SCEEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTT
T ss_pred             CCceEEEEEEecCCCCHHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCC
Confidence             46799999999 889999998765  7999999999999999999999999  99999999999998 78999999999


Q ss_pred             CCCcCCCC----cccceeeeeceeEe
Q 024661          240 VPSPRHAF----SFQTFLSMASRVYI  261 (264)
Q Consensus       240 ~a~~~~~~----~~~~~~y~ape~~~  261 (264)
                      ++......    ..++..|+|||++.
T Consensus       178 ~~~~~~~~~~~~~~~t~~y~aPE~~~  203 (290)
T 1t4h_A          178 LATLKRASFAKAVIGTPEFMAPEMYE  203 (290)
T ss_dssp             GGGGCCTTSBEESCSSCCCCCGGGGG
T ss_pred             CcccccccccccccCCcCcCCHHHHh
Confidence            99754432    34788999999754

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.98  E-value=4.3e-32  Score=226.54  Aligned_cols=167  Identities=25%  Similarity=0.374  Sum_probs=140.7

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ....++|++.+.||+|+||.||+|.+..+|+.||+|++.... ..+.+.+|+.+++.+.|+|+     +++++++.+.+.
T Consensus        25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~   98 (314)
T 3com_A           25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHV-----VKYYGSYFKNTD   98 (314)
T ss_dssp             -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTB-----CCEEEEEEETTE
T ss_pred             hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCC-----ccEEEEEEeCCE
Confidence            455678999999999999999999999999999999987543 34678889999999988887     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      +|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.....
T Consensus        99 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  177 (314)
T 3com_A           99 LWIVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD  177 (314)
T ss_dssp             EEEEEECCTTEEHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBT
T ss_pred             EEEEeecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhh
Confidence            99999999 789999997433 4699999999999999999999999999999999999999999999999999965332


Q ss_pred             ------CcccceeeeeceeEe
Q 024661          247 ------FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ------~~~~~~~y~ape~~~  261 (264)
                            ...++..|+|||++.
T Consensus       178 ~~~~~~~~~~~~~y~aPE~~~  198 (314)
T 3com_A          178 TMAKRNTVIGTPFWMAPEVIQ  198 (314)
T ss_dssp             TBSCBCCCCSCGGGCCHHHHS
T ss_pred             hccccCccCCCCCccChhhcC
Confidence                  335788899999764

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.98  E-value=3.9e-32  Score=223.99  Aligned_cols=166  Identities=20%  Similarity=0.234  Sum_probs=143.0

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhh--------hHHHHHHHHHHHHHHhccCCCCcceEEEc
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK--------YREAAMIEIDVLQRLARHDIGGTRCVQIR  159 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--------~~~~~~~e~~~l~~l~~~~~~~~~~~~~~  159 (264)
                      ....++|++.+.||+|+||.||+|.+..+++.||+|++.....        ..+.+.+|+.+++.++|+|+     ++++
T Consensus        15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~   89 (287)
T 4f0f_A           15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI-----VKLY   89 (287)
T ss_dssp             BCCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTB-----CCEE
T ss_pred             hhhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCc-----hhhh
Confidence            4556789999999999999999999999999999999863221        11678899999999988887     9999


Q ss_pred             eeeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEeecCCc----
Q 024661          160 NWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEY----  232 (264)
Q Consensus       160 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dikp~Nili~~~~~----  232 (264)
                      +++.+..  ++||||+ +++|.+++.... ..+++..++.++.|++.||+|||++|  |+|+||||+|||++.++.    
T Consensus        90 ~~~~~~~--~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~  166 (287)
T 4f0f_A           90 GLMHNPP--RMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPV  166 (287)
T ss_dssp             EEETTTT--EEEEECCTTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSC
T ss_pred             eeecCCC--eEEEEecCCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCce
Confidence            9987665  6999999 899999887654 46999999999999999999999999  999999999999988776    


Q ss_pred             -EEeccCCCCCcCCC---CcccceeeeeceeEe
Q 024661          233 -VKVPDYKVPSPRHA---FSFQTFLSMASRVYI  261 (264)
Q Consensus       233 -v~l~Dfg~a~~~~~---~~~~~~~y~ape~~~  261 (264)
                       +||+|||++.....   ...+|..|+|||++.
T Consensus       167 ~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~  199 (287)
T 4f0f_A          167 CAKVADFGLSQQSVHSVSGLLGNFQWMAPETIG  199 (287)
T ss_dssp             CEEECCCTTCBCCSSCEECCCCCCTTSCGGGSS
T ss_pred             eEEeCCCCccccccccccccCCCccccCchhhc
Confidence             99999999976443   235788999999873

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.98  E-value=1.7e-32  Score=230.53  Aligned_cols=164  Identities=19%  Similarity=0.279  Sum_probs=134.2

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEE----EEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELV----AIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~v----aiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      .++|++.+.||+|+||.||+|.+..+++.+    |+|.+...  ....+.+.+|+.+++.++|+|+     +++++++.+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~   88 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV-----CRLLGICLT   88 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTB-----CCEEEEEES
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCE-----eEEEEEEec
Confidence            467999999999999999999998887654    67766432  2445778899999999999888     999999887


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      .. .++|+|++ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++++||+|||+++.
T Consensus        89 ~~-~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~  166 (327)
T 3poz_A           89 ST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL  166 (327)
T ss_dssp             SS-EEEEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred             CC-eEEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeE
Confidence            65 77888999 999999998754 4699999999999999999999999999999999999999999999999999865


Q ss_pred             CCC--------CcccceeeeeceeEe
Q 024661          244 RHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~--------~~~~~~~y~ape~~~  261 (264)
                      ...        ...+|..|+|||++.
T Consensus       167 ~~~~~~~~~~~~~~~t~~y~aPE~~~  192 (327)
T 3poz_A          167 LGAEEKEYHAEGGKVPIKWMALESIL  192 (327)
T ss_dssp             HTTTCC-------CCCGGGSCHHHHH
T ss_pred             ccCCcccccccCCCccccccChHHhc
Confidence            322        223466899999764

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.98  E-value=3.6e-32  Score=228.41  Aligned_cols=164  Identities=24%  Similarity=0.334  Sum_probs=142.1

Q ss_pred             CCeEEEeecccCccEEEEEEE----eCCCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeee--e
Q 024661           92 PRYRILSKMGEGTFGQVVECF----DNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD--Y  164 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~--~  164 (264)
                      ++|++.+.||+|+||.||+|.    +..+++.||+|++... ....+.+.+|+++++.++|+|+     +++++++.  +
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~   97 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI-----VKYRGVSYGPG   97 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTB-----CCEEEEEECSS
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCce-----eEEEEEEecCC
Confidence            679999999999999999999    5678899999998754 3445678999999999988887     88888876  4


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      ...+|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++..
T Consensus        98 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~  176 (327)
T 3lxl_A           98 RQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKL  176 (327)
T ss_dssp             SCEEEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred             CceEEEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEccccccee
Confidence            67899999999 999999998743 2599999999999999999999999999999999999999999999999999975


Q ss_pred             CCC---------CcccceeeeeceeEe
Q 024661          244 RHA---------FSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~---------~~~~~~~y~ape~~~  261 (264)
                      ...         ...++..|+|||++.
T Consensus       177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~  203 (327)
T 3lxl_A          177 LPLDKDYYVVREPGQSPIFWYAPESLS  203 (327)
T ss_dssp             CCTTCSEEECSSCCCSCGGGSCHHHHH
T ss_pred             cccCCccceeeccCCccccccCHHHhc
Confidence            432         224666799999754

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.98  E-value=3.7e-32  Score=228.83  Aligned_cols=168  Identities=22%  Similarity=0.299  Sum_probs=144.0

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCc-----EEEEEEEech--hhhHHHHHHHHHHHHHH-hccCCCCcceEEEce
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKE-----LVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRN  160 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~  160 (264)
                      ...++|++.+.||+|+||.||+|.+..+++     .||+|++...  ....+.+.+|+.+++.+ .|+|+     +++++
T Consensus        43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i-----v~~~~  117 (333)
T 2i1m_A           43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI-----VNLLG  117 (333)
T ss_dssp             CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTB-----CCEEE
T ss_pred             CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCe-----eeEEE
Confidence            345789999999999999999999877654     7999998753  24457788999999999 78887     99999


Q ss_pred             eeeeCCEEEEEEecC-CCCHHHHHHhcC------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEe
Q 024661          161 WFDYRNHICIVFEKL-GPSLYDFLRKNS------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL  227 (264)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili  227 (264)
                      ++.+.+.+|+||||+ +++|.+++....            ...+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus       118 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~  197 (333)
T 2i1m_A          118 ACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL  197 (333)
T ss_dssp             EECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEE
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEE
Confidence            999999999999999 889999997532            2358999999999999999999999999999999999999


Q ss_pred             ecCCcEEeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          228 VSAEYVKVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       228 ~~~~~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      +.++.+||+|||++.....        ...++..|+|||++.
T Consensus       198 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  239 (333)
T 2i1m_A          198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIF  239 (333)
T ss_dssp             EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHH
T ss_pred             CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhc
Confidence            9999999999999975422        223456799999753

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.98  E-value=9.5e-32  Score=225.97  Aligned_cols=161  Identities=17%  Similarity=0.380  Sum_probs=141.2

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHh-ccCCCCcceEEEceeeee--CC
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDY--RN  166 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~--~~  166 (264)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|+++...  .+.+.+|+.+++.+. |+|+     +++++++.+  ..
T Consensus        34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~E~~~l~~l~~~~~i-----~~~~~~~~~~~~~  106 (330)
T 3nsz_A           34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK--KKKIKREIKILENLRGGPNI-----ITLADIVKDPVSR  106 (330)
T ss_dssp             EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC--HHHHHHHHHHHHHHTTSTTB-----CCEEEEEECTTTC
T ss_pred             CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc--hHHHHHHHHHHHHcCCCCCE-----EEeeeeeccCCCC
Confidence            3478999999999999999999999999999999987433  467889999999998 7777     999999988  67


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC-cEEeccCCCCCcC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE-YVKVPDYKVPSPR  244 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~-~v~l~Dfg~a~~~  244 (264)
                      ..++||||+ +++|.+++.     .+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||++...
T Consensus       107 ~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~  181 (330)
T 3nsz_A          107 TPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY  181 (330)
T ss_dssp             CEEEEEECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             ceEEEEeccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence            899999999 889998874     388999999999999999999999999999999999999777 8999999999753


Q ss_pred             C-----CCcccceeeeeceeEee
Q 024661          245 H-----AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       245 ~-----~~~~~~~~y~ape~~~~  262 (264)
                      .     ....++..|+|||++.+
T Consensus       182 ~~~~~~~~~~~~~~y~aPE~~~~  204 (330)
T 3nsz_A          182 HPGQEYNVRVASRYFKGPELLVD  204 (330)
T ss_dssp             CTTCCCCSCCSCGGGCCHHHHTT
T ss_pred             CCCCccccccccccccChhhhcC
Confidence            3     23357888999998653

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.97  E-value=1e-32  Score=233.51  Aligned_cols=169  Identities=21%  Similarity=0.225  Sum_probs=136.1

Q ss_pred             CCccCCCeEEEeecccCccEEEEEEEeCC---CCcEEEEEEEechhh------------hHHHHHHHHHHHHHHhccCCC
Q 024661           87 GENLTPRYRILSKMGEGTFGQVVECFDNE---KKELVAIKIVRSINK------------YREAAMIEIDVLQRLARHDIG  151 (264)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~------------~~~~~~~e~~~l~~l~~~~~~  151 (264)
                      .+...++|++.+.||+|+||.||+|.+..   ++..+|+|++.....            ....+.+|+..++.+.|+|+ 
T Consensus        32 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni-  110 (345)
T 2v62_A           32 DDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGI-  110 (345)
T ss_dssp             ECTTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCC-
T ss_pred             ccccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCc-
Confidence            34556789999999999999999999987   788899999874321            12234566777777777777 


Q ss_pred             CcceEEEceeeee----CCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEe
Q 024661          152 GTRCVQIRNWFDY----RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL  227 (264)
Q Consensus       152 ~~~~~~~~~~~~~----~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili  227 (264)
                          +++++++.+    ....|+||||++++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus       111 ----~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll  184 (345)
T 2v62_A          111 ----PLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLL  184 (345)
T ss_dssp             ----CCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred             ----ceeecccccccCCCcEEEEEEeccCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEE
Confidence                999999887    78999999999999999998765  79999999999999999999999999999999999999


Q ss_pred             ecCC--cEEeccCCCCCcCC-------------CCcccceeeeeceeEee
Q 024661          228 VSAE--YVKVPDYKVPSPRH-------------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       228 ~~~~--~v~l~Dfg~a~~~~-------------~~~~~~~~y~ape~~~~  262 (264)
                      +.++  .+||+|||+++...             ....+|..|+|||++.+
T Consensus       185 ~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  234 (345)
T 2v62_A          185 GYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKG  234 (345)
T ss_dssp             ESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHT
T ss_pred             ccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcC
Confidence            9887  99999999996532             22357889999998643

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.97  E-value=1e-32  Score=235.96  Aligned_cols=166  Identities=22%  Similarity=0.278  Sum_probs=136.2

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeC---CCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ..++|++.+.||+|+||.||+|++.   .++..||+|+++..  ....+.+.+|+.+++.++|+|+     +++++++.+
T Consensus        43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-----v~~~~~~~~  117 (373)
T 2qol_A           43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI-----IRLEGVVTK  117 (373)
T ss_dssp             CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEECS
T ss_pred             CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEee
Confidence            3467999999999999999999886   45678999998743  3455778999999999998887     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      .+..|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~  196 (373)
T 2qol_A          118 SKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRV  196 (373)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred             CCceEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence            99999999999 899999998653 4699999999999999999999999999999999999999999999999999976


Q ss_pred             CCCCc---------ccceeeeeceeEe
Q 024661          244 RHAFS---------FQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~~~---------~~~~~y~ape~~~  261 (264)
                      .....         .++..|+|||++.
T Consensus       197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~  223 (373)
T 2qol_A          197 LEDDPEAAYTTRGGKIPIRWTSPEAIA  223 (373)
T ss_dssp             -----------------CTTSCHHHHH
T ss_pred             cccCCccceeccCCCcCCCccChhhhc
Confidence            43221         2345699999764

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.97  E-value=1.1e-32  Score=234.04  Aligned_cols=168  Identities=16%  Similarity=0.132  Sum_probs=141.3

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCC--------CcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCC----------C
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEK--------KELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG----------G  152 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~--------~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~----------~  152 (264)
                      .++|++.+.||+|+||.||+|.+..+        ++.||+|++...    +.+.+|+++++.+.|+|+.          .
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  116 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL  116 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence            57899999999999999999999874        789999998754    3577899999999987751          2


Q ss_pred             cceEEEceeeee-CCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC
Q 024661          153 TRCVQIRNWFDY-RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (264)
Q Consensus       153 ~~~~~~~~~~~~-~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~  231 (264)
                      .+++.+++++.. +...|+||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus       117 ~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~  196 (352)
T 2jii_A          117 LAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPED  196 (352)
T ss_dssp             CSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTE
T ss_pred             cCccchhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCC
Confidence            344557777776 7899999999999999999976334799999999999999999999999999999999999999998


Q ss_pred             --cEEeccCCCCCcCCC-------------CcccceeeeeceeEee
Q 024661          232 --YVKVPDYKVPSPRHA-------------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       232 --~v~l~Dfg~a~~~~~-------------~~~~~~~y~ape~~~~  262 (264)
                        .+||+|||++.....             ...+|..|+|||++.+
T Consensus       197 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  242 (352)
T 2jii_A          197 QSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKG  242 (352)
T ss_dssp             EEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTT
T ss_pred             CceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHcc
Confidence              999999999965332             2257889999997643

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.97  E-value=2.9e-32  Score=232.02  Aligned_cols=168  Identities=20%  Similarity=0.302  Sum_probs=138.5

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh------------hhHHHHHHHHHHHHHHhccCCCCcce
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN------------KYREAAMIEIDVLQRLARHDIGGTRC  155 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~------------~~~~~~~~e~~~l~~l~~~~~~~~~~  155 (264)
                      ..+.++|++.+.||+|+||.||+|.+.. ++.||+|++....            ...+.+.+|+.+++.++|+|+     
T Consensus        18 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----   91 (362)
T 3pg1_A           18 HAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI-----   91 (362)
T ss_dssp             HHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB-----
T ss_pred             HHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc-----
Confidence            4567899999999999999999999865 8899999885321            223778999999999999888     


Q ss_pred             EEEceeeee-----CCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC
Q 024661          156 VQIRNWFDY-----RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA  230 (264)
Q Consensus       156 ~~~~~~~~~-----~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~  230 (264)
                      +++++++..     ...+|+||||+.++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+|||++.+
T Consensus        92 v~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~  170 (362)
T 3pg1_A           92 LGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADN  170 (362)
T ss_dssp             CCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTT
T ss_pred             cceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCC
Confidence            899888844     44789999999889999988643 469999999999999999999999999999999999999999


Q ss_pred             CcEEeccCCCCCcCCC-----CcccceeeeeceeEee
Q 024661          231 EYVKVPDYKVPSPRHA-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       231 ~~v~l~Dfg~a~~~~~-----~~~~~~~y~ape~~~~  262 (264)
                      +.+||+|||++.....     ...+|..|+|||++.+
T Consensus       171 ~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~  207 (362)
T 3pg1_A          171 NDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQ  207 (362)
T ss_dssp             CCEEECCTTC---------------CGGGCCHHHHTT
T ss_pred             CCEEEEecCcccccccccccceecccceecCcHHhcC
Confidence            9999999999975332     2357788999998653

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.97  E-value=1e-31  Score=226.62  Aligned_cols=166  Identities=23%  Similarity=0.371  Sum_probs=124.7

Q ss_pred             CccCCCeEEEe-ecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee--
Q 024661           88 ENLTPRYRILS-KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--  164 (264)
Q Consensus        88 ~~~~~~y~~~~-~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~--  164 (264)
                      ..+.++|.+.+ .||+|+||.||+|.+..+++.||+|++.........   ....++.+.|+|+     +++++++..  
T Consensus        24 ~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~e---~~~~~~~~~h~~i-----~~~~~~~~~~~   95 (336)
T 3fhr_A           24 YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQE---VDHHWQASGGPHI-----VCILDVYENMH   95 (336)
T ss_dssp             SCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHHH---HHHHHHHTTSTTB-----CCEEEEEEEEE
T ss_pred             ccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHHH---HHHHHHhcCCCCh-----HHHHHHHhhcc
Confidence            45668899965 699999999999999999999999999765433322   2233556677776     888888876  


Q ss_pred             --CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC---CcEEeccC
Q 024661          165 --RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA---EYVKVPDY  238 (264)
Q Consensus       165 --~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~---~~v~l~Df  238 (264)
                        ...+|+||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.+   +.+||+||
T Consensus        96 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Df  175 (336)
T 3fhr_A           96 HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDF  175 (336)
T ss_dssp             TTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred             CCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEecc
Confidence              56699999999 8899999997765679999999999999999999999999999999999999864   55999999


Q ss_pred             CCCCcCCC----CcccceeeeeceeEe
Q 024661          239 KVPSPRHA----FSFQTFLSMASRVYI  261 (264)
Q Consensus       239 g~a~~~~~----~~~~~~~y~ape~~~  261 (264)
                      |++.....    ...+|..|+|||++.
T Consensus       176 g~~~~~~~~~~~~~~~t~~y~aPE~~~  202 (336)
T 3fhr_A          176 GFAKETTQNALQTPCYTPYYVAPEVLG  202 (336)
T ss_dssp             TTCEEC---------------------
T ss_pred             ccceeccccccccCCCCcCccChhhhC
Confidence            99975432    335788999999874

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.97  E-value=2.7e-32  Score=228.70  Aligned_cols=169  Identities=15%  Similarity=0.189  Sum_probs=130.0

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCc---EEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEcee
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKE---LVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNW  161 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~  161 (264)
                      ....++|++.+.||+|+||.||+|.+..++.   .||+|+++..   ....+.+.+|+.+++.++|+|+     ++++++
T Consensus        19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~   93 (323)
T 3qup_A           19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHV-----AKLVGV   93 (323)
T ss_dssp             BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTB-----CCCCEE
T ss_pred             ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCce-----ehhhce
Confidence            3455789999999999999999999887765   7999998743   3446778899999999988887     999999


Q ss_pred             eeeCCEE------EEEEecC-CCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC
Q 024661          162 FDYRNHI------CIVFEKL-GPSLYDFLRKNS----YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA  230 (264)
Q Consensus       162 ~~~~~~~------~lv~e~~-~~~L~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~  230 (264)
                      +......      ++||||+ +++|.+++....    ...+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus        94 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~  173 (323)
T 3qup_A           94 SLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAED  173 (323)
T ss_dssp             EECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTT
T ss_pred             eeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCC
Confidence            8876655      9999999 889999997532    1258999999999999999999999999999999999999999


Q ss_pred             CcEEeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          231 EYVKVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       231 ~~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      +.+||+|||++.....        ...++..|+|||++.
T Consensus       174 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~  212 (323)
T 3qup_A          174 MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLA  212 (323)
T ss_dssp             SCEEECCCCC-----------------CCGGGCCHHHHH
T ss_pred             CCEEEeeccccccccccccccccccccCcccccCchhhc
Confidence            9999999999976432        223456799999754

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.97  E-value=9.4e-32  Score=225.54  Aligned_cols=168  Identities=26%  Similarity=0.453  Sum_probs=142.7

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeC-CCCcEEEEEEEechh---hhHHHHHHHHHHHHHH---hccCCCCcceEEEcee
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDN-EKKELVAIKIVRSIN---KYREAAMIEIDVLQRL---ARHDIGGTRCVQIRNW  161 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l---~~~~~~~~~~~~~~~~  161 (264)
                      ...++|++.+.||+|+||.||+|.+. .+++.||+|+++...   .....+.+|+.+++.+   .|+|+     ++++++
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i-----~~~~~~   82 (326)
T 1blx_A            8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV-----VRLFDV   82 (326)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTB-----CCEEEE
T ss_pred             CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCe-----Eeeeee
Confidence            34578999999999999999999995 678899999987432   2234566788888887   57766     899888


Q ss_pred             ee-----eCCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEec
Q 024661          162 FD-----YRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVP  236 (264)
Q Consensus       162 ~~-----~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~  236 (264)
                      +.     .....++|||++.++|.+++.......+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~  162 (326)
T 1blx_A           83 CTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLA  162 (326)
T ss_dssp             EEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred             eeecccCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEe
Confidence            86     5678999999998899999998765569999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCcCCC-----CcccceeeeeceeEe
Q 024661          237 DYKVPSPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       237 Dfg~a~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      |||++.....     ...++..|+|||++.
T Consensus       163 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~  192 (326)
T 1blx_A          163 DFGLARIYSFQMALTSVVVTLWYRAPEVLL  192 (326)
T ss_dssp             SCCSCCCCCGGGGGCCCCCCCTTCCHHHHT
T ss_pred             cCcccccccCCCCccccccccceeCHHHHh
Confidence            9999976442     335788899999764

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.97  E-value=2.8e-32  Score=225.30  Aligned_cols=168  Identities=24%  Similarity=0.331  Sum_probs=135.5

Q ss_pred             EeeCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEce
Q 024661           84 FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (264)
Q Consensus        84 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~  160 (264)
                      ...++...++|++.++||+|+||.||+|.+..   .+|+|+++..   ....+.+.+|+.+++.+.|+|+     +.+++
T Consensus        16 ~~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~   87 (289)
T 3og7_A           16 ADDWEIPDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI-----LLFMG   87 (289)
T ss_dssp             --CCBCCTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTB-----CCEEE
T ss_pred             CCCCccCccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcE-----EEEEe
Confidence            44557778899999999999999999998753   4999998632   3455778899999999998887     88888


Q ss_pred             eeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          161 WFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                      + ......++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||
T Consensus        88 ~-~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg  165 (289)
T 3og7_A           88 Y-STAPQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFG  165 (289)
T ss_dssp             E-ECSSSCEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC
T ss_pred             e-ccCCccEEEEEecCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccce
Confidence            5 4556789999999 899999997543 469999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCC--------CcccceeeeeceeEe
Q 024661          240 VPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       240 ~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      ++.....        ...+|..|+|||++.
T Consensus       166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  195 (289)
T 3og7_A          166 LATEKSRWSGSHQFEQLSGSILWMAPEVIR  195 (289)
T ss_dssp             ------------------CCCTTCCHHHHC
T ss_pred             eccccccccccccccccCCCccccCchhhc
Confidence            9975332        234788999999864

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.97  E-value=2.1e-32  Score=237.46  Aligned_cols=163  Identities=24%  Similarity=0.369  Sum_probs=136.4

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee------C
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY------R  165 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~------~  165 (264)
                      .+|++.+.||+|+||.||+|.+..+++.||||++.....   ...+|+++++.++|+|+     +++++++..      .
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~E~~il~~l~hpni-----v~l~~~~~~~~~~~~~  125 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKLDHCNI-----VRLRYFFYSSGEKKDE  125 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHHTCCCTTB-----CCEEEEEEEEETTTTE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHcCCCCc-----cceeeEEeccCCCCcc
Confidence            469999999999999999999999999999999875432   23469999999999888     888888743      2


Q ss_pred             CEEEEEEecCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC-CcEEeccCCCCC
Q 024661          166 NHICIVFEKLGPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA-EYVKVPDYKVPS  242 (264)
Q Consensus       166 ~~~~lv~e~~~~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~-~~v~l~Dfg~a~  242 (264)
                      .++++||||+.++|.+++..  .....+++..++.++.||+.||.|||++||+||||||+|||++.+ +.+||+|||+++
T Consensus       126 ~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~  205 (420)
T 1j1b_A          126 VYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK  205 (420)
T ss_dssp             EEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             eeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence            35789999998788877763  223479999999999999999999999999999999999999965 678999999997


Q ss_pred             cCC-----CCcccceeeeeceeEee
Q 024661          243 PRH-----AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       243 ~~~-----~~~~~~~~y~ape~~~~  262 (264)
                      ...     ....+|..|+|||++.+
T Consensus       206 ~~~~~~~~~~~~~t~~y~aPE~~~~  230 (420)
T 1j1b_A          206 QLVRGEPNVSYICSRYYRAPELIFG  230 (420)
T ss_dssp             ECCTTCCCCSCCSCTTSCCHHHHTT
T ss_pred             hcccCCCceeeeeCCCcCCHHHHcC
Confidence            532     23457889999998643

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.97  E-value=3.2e-32  Score=229.43  Aligned_cols=162  Identities=19%  Similarity=0.213  Sum_probs=131.2

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeee-----eC
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD-----YR  165 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~-----~~  165 (264)
                      .++|++.+.||+|+||.||+|.+  +++.||+|++............|+..+..+.|+|+     +++++.+.     ..
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i-----~~~~~~~~~~~~~~~   84 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNI-----ARFIVGDERVTADGR   84 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTB-----CCEEEEEEEECTTSC
T ss_pred             hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcch-----hhheecccccccCCC
Confidence            46799999999999999999976  57899999997544333333334433444667666     77776443     24


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCeecCCCCCCEEeecCCcEEe
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL---------RLIHTDLKPENILLVSAEYVKV  235 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---------~ivH~dikp~Nili~~~~~v~l  235 (264)
                      ..+|+||||+ +++|.+++....   .++..++.++.||+.||.|||++         ||+||||||+|||++.++.+||
T Consensus        85 ~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL  161 (336)
T 3g2f_A           85 MEYLLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI  161 (336)
T ss_dssp             EEEEEEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred             ceEEEEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEE
Confidence            4789999999 899999998764   68999999999999999999999         9999999999999999999999


Q ss_pred             ccCCCCCcCCC--------------CcccceeeeeceeEee
Q 024661          236 PDYKVPSPRHA--------------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       236 ~Dfg~a~~~~~--------------~~~~~~~y~ape~~~~  262 (264)
                      +|||++.....              ...+|..|+|||++.+
T Consensus       162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  202 (336)
T 3g2f_A          162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEG  202 (336)
T ss_dssp             CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTT
T ss_pred             eeccceeecccccccCccccccccccCCCccceeCchhhcC
Confidence            99999965322              2358899999998754

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.97  E-value=1.4e-32  Score=246.39  Aligned_cols=155  Identities=17%  Similarity=0.144  Sum_probs=123.6

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEech-----------hhhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeC
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSI-----------NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----------~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~  165 (264)
                      ...+.|++|.+..++....|+.+++|++.+.           +...+.+.+|+++|+++ .|+|+     ++++++++++
T Consensus       240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i-----~~~~~~~ed~  314 (569)
T 4azs_A          240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDA-----PAVLAHGENA  314 (569)
T ss_dssp             CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCC-----CCEEEEEECS
T ss_pred             hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCe-----eEEEEEEEEC
Confidence            3567777777777777777999999998642           24456789999999999 56666     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      +.+||||||+ |++|.+++....  .+++.   .|+.||+.||+|+|++|||||||||+|||++.+|++||+|||+|+..
T Consensus       315 ~~~yLVMEyv~G~~L~d~i~~~~--~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~  389 (569)
T 4azs_A          315 QSGWLVMEKLPGRLLSDMLAAGE--EIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTT  389 (569)
T ss_dssp             SEEEEEEECCCSEEHHHHHHTTC--CCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESC
T ss_pred             CEEEEEEecCCCCcHHHHHHhCC--CCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeC
Confidence            9999999999 999999998765  67765   47899999999999999999999999999999999999999999764


Q ss_pred             CC------CcccceeeeeceeEee
Q 024661          245 HA------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       245 ~~------~~~~~~~y~ape~~~~  262 (264)
                      ..      ..+||+.|||||++.+
T Consensus       390 ~~~~~~~~t~vGTp~YmAPE~l~g  413 (569)
T 4azs_A          390 PQDCSWPTNLVQSFFVFVNELFAE  413 (569)
T ss_dssp             C---CCSHHHHHHHHHHHHHHC--
T ss_pred             CCCCccccCceechhhccHHHhCC
Confidence            43      2358999999998754

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.97  E-value=1.9e-32  Score=229.44  Aligned_cols=169  Identities=18%  Similarity=0.293  Sum_probs=144.2

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeC-----CCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEce
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~  160 (264)
                      +...++|++.+.||+|+||.||+|.+.     .+++.||+|++....  .....+.+|+.+++.+.|+|+     +++++
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~   95 (322)
T 1p4o_A           21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV-----VRLLG   95 (322)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTB-----CCEEE
T ss_pred             cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCE-----eeeEE
Confidence            355678999999999999999999876     357889999987432  345568899999999988887     99999


Q ss_pred             eeeeCCEEEEEEecC-CCCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC
Q 024661          161 WFDYRNHICIVFEKL-GPSLYDFLRKNS--------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (264)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~--------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~  231 (264)
                      ++.+.+..|+||||+ +++|.+++....        ...+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus        96 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~  175 (322)
T 1p4o_A           96 VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDF  175 (322)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTC
T ss_pred             EEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCC
Confidence            999999999999999 889999997532        13578999999999999999999999999999999999999999


Q ss_pred             cEEeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          232 YVKVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       232 ~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      .+||+|||++.....        ...++..|+|||++.
T Consensus       176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  213 (322)
T 1p4o_A          176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK  213 (322)
T ss_dssp             CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHH
T ss_pred             eEEECcCccccccccccccccccCCCCCCCccChhhhc
Confidence            999999999975432        223566799999764

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.97  E-value=6.5e-32  Score=229.60  Aligned_cols=167  Identities=23%  Similarity=0.296  Sum_probs=132.1

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC---
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN---  166 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~---  166 (264)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|++...........+++..++.+.|+|+     +++++++...+   
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~ni-----v~~~~~~~~~~~~~   95 (360)
T 3e3p_A           21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNI-----VQLQSYFYTLGERD   95 (360)
T ss_dssp             HHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTB-----CCEEEEEEEECSSC
T ss_pred             hccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCc-----ccHHHhhhcccccc
Confidence            3367999999999999999999999999999999987665555667788888899999888     99999886533   


Q ss_pred             ----EEEEEEecCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHH--HCCCeecCCCCCCEEeec-CCcEEecc
Q 024661          167 ----HICIVFEKLGPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMH--ELRLIHTDLKPENILLVS-AEYVKVPD  237 (264)
Q Consensus       167 ----~~~lv~e~~~~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH--~~~ivH~dikp~Nili~~-~~~v~l~D  237 (264)
                          .+++||||+.++|.+.+..  .....+++..++.++.|++.||.|||  ++||+||||||+|||++. ++.+||+|
T Consensus        96 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~D  175 (360)
T 3e3p_A           96 RRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCD  175 (360)
T ss_dssp             TTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECC
T ss_pred             ccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEee
Confidence                3899999997787776653  23347899999999999999999999  999999999999999997 89999999


Q ss_pred             CCCCCcCCC-----CcccceeeeeceeEe
Q 024661          238 YKVPSPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       238 fg~a~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      ||++.....     ...+|..|+|||++.
T Consensus       176 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~  204 (360)
T 3e3p_A          176 FGSAKKLSPSEPNVAYICSRYYRAPELIF  204 (360)
T ss_dssp             CTTCBCCCTTSCCCSTTSCGGGCCHHHHT
T ss_pred             CCCceecCCCCCcccccCCcceeCHHHHc
Confidence            999976433     335788999999864

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.97  E-value=2e-32  Score=239.78  Aligned_cols=166  Identities=24%  Similarity=0.305  Sum_probs=140.4

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ...++|++.++||+|+||.||+|.+.. +..||+|+++......+.+.+|+.+++.++|+|+     +++++++.+ +..
T Consensus       181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~-~~~  253 (452)
T 1fmk_A          181 IPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL-----VQLYAVVSE-EPI  253 (452)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTB-----CCEEEEECS-SSC
T ss_pred             cChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCE-----eeEEEEEcC-Cce
Confidence            344679999999999999999999875 4569999998655566789999999999999888     899988876 678


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF  247 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~  247 (264)
                      |+||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus       254 ~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~  333 (452)
T 1fmk_A          254 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN  333 (452)
T ss_dssp             EEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred             EEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCC
Confidence            9999999 899999998543346899999999999999999999999999999999999999999999999999864322


Q ss_pred             -------cccceeeeeceeEe
Q 024661          248 -------SFQTFLSMASRVYI  261 (264)
Q Consensus       248 -------~~~~~~y~ape~~~  261 (264)
                             ..++..|+|||++.
T Consensus       334 ~~~~~~~~~~~~~y~aPE~~~  354 (452)
T 1fmk_A          334 EYTARQGAKFPIKWTAPEAAL  354 (452)
T ss_dssp             ---------CCGGGSCHHHHH
T ss_pred             ceecccCCcccccccCHhHHh
Confidence                   12456799999753

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.97  E-value=2.3e-32  Score=243.97  Aligned_cols=164  Identities=24%  Similarity=0.315  Sum_probs=142.2

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      .++|++.++||+|+||.||+|.+.. +..||||+++......+.+.+|+++++.++|+|+     +++++++.+ +.+||
T Consensus       266 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpni-----v~~~~~~~~-~~~~l  338 (535)
T 2h8h_A          266 RESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL-----VQLYAVVSE-EPIYI  338 (535)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTB-----CCEEEEECS-SSCEE
T ss_pred             hhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCE-----eeEEEEEee-ccceE
Confidence            3569999999999999999999875 4569999998665566789999999999999888     899988866 67899


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---  246 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---  246 (264)
                      ||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....   
T Consensus       339 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  418 (535)
T 2h8h_A          339 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY  418 (535)
T ss_dssp             EECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH
T ss_pred             eeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCce
Confidence            99999 88999999854334689999999999999999999999999999999999999999999999999986543   


Q ss_pred             ----CcccceeeeeceeEe
Q 024661          247 ----FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ----~~~~~~~y~ape~~~  261 (264)
                          ...++..|||||++.
T Consensus       419 ~~~~~~~~~~~y~aPE~~~  437 (535)
T 2h8h_A          419 TARQGAKFPIKWTAPEAAL  437 (535)
T ss_dssp             HTTCSTTSCGGGSCHHHHH
T ss_pred             ecccCCcCcccccCHHHhc
Confidence                223456799999753

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.97  E-value=2.8e-32  Score=223.93  Aligned_cols=166  Identities=23%  Similarity=0.334  Sum_probs=142.2

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ...++|++.+.||+|+||.||+|.+. ++..||+|++.......+.+.+|+++++.++|+|+     +++++++.+ +..
T Consensus        10 v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~-~~~   82 (279)
T 1qpc_A           10 VPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL-----VRLYAVVTQ-EPI   82 (279)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTB-----CCEEEEECS-SSC
T ss_pred             cCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCc-----ceEEEEEcC-CCc
Confidence            34578999999999999999999975 56789999998665567788999999999999887     888888764 568


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF  247 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~  247 (264)
                      ++|||++ +++|.+++.......+++..++.++.|++.||.|||++||+|+||||+|||++.++.++|+|||++......
T Consensus        83 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  162 (279)
T 1qpc_A           83 YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN  162 (279)
T ss_dssp             EEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence            9999999 899999997543236899999999999999999999999999999999999999999999999999764332


Q ss_pred             -------cccceeeeeceeEe
Q 024661          248 -------SFQTFLSMASRVYI  261 (264)
Q Consensus       248 -------~~~~~~y~ape~~~  261 (264)
                             ..++..|+|||++.
T Consensus       163 ~~~~~~~~~~~~~y~aPE~~~  183 (279)
T 1qpc_A          163 EYTAREGAKFPIKWTAPEAIN  183 (279)
T ss_dssp             CEECCTTCCCCTTTSCHHHHH
T ss_pred             ccccccCCCCccCccChhhhc
Confidence                   23456799999753

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.97  E-value=1.6e-31  Score=223.18  Aligned_cols=172  Identities=24%  Similarity=0.330  Sum_probs=144.0

Q ss_pred             EeeCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEce
Q 024661           84 FAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (264)
Q Consensus        84 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~  160 (264)
                      +.......++|++.+.||+|+||.||+|.+. +++.||+|++...   ....+.+.+|+.+++.+.|++   ++++++++
T Consensus        20 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~---~~iv~~~~   95 (313)
T 3cek_A           20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS---DKIIRLYD   95 (313)
T ss_dssp             CCEEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGC---TTBCCEEE
T ss_pred             eeeeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccC---CceEEEEE
Confidence            3344556678999999999999999999985 4888999998643   345577889999999998621   34499999


Q ss_pred             eeeeCCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCC
Q 024661          161 WFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV  240 (264)
Q Consensus       161 ~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~  240 (264)
                      ++.+.+..|+|||+.+++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||+
T Consensus        96 ~~~~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~  172 (313)
T 3cek_A           96 YEITDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGI  172 (313)
T ss_dssp             EEECSSEEEEEECCCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSS
T ss_pred             EeecCCEEEEEEecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeeccc
Confidence            999999999999977999999998765  789999999999999999999999999999999999996 58999999999


Q ss_pred             CCcCCC--------CcccceeeeeceeEee
Q 024661          241 PSPRHA--------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       241 a~~~~~--------~~~~~~~y~ape~~~~  262 (264)
                      +.....        ...++..|+|||++.+
T Consensus       173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  202 (313)
T 3cek_A          173 ANQMQPDTTSVVKDSQVGTVNYMPPEAIKD  202 (313)
T ss_dssp             SCC--------------CCGGGCCHHHHTT
T ss_pred             cccccCccccccccCCCCCCCcCCHHHHhh
Confidence            976432        2357889999998753

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.97  E-value=6.6e-32  Score=226.06  Aligned_cols=165  Identities=25%  Similarity=0.382  Sum_probs=141.3

Q ss_pred             ccCCCe-EEEeecccCccEEEEEEEe----CCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEcee
Q 024661           89 NLTPRY-RILSKMGEGTFGQVVECFD----NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNW  161 (264)
Q Consensus        89 ~~~~~y-~~~~~lg~G~~g~V~~~~~----~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~  161 (264)
                      .+.++| ++++.||+|+||.||++.+    ..+++.||+|+++...  ...+.+.+|+++++.++|+|+     ++++++
T Consensus        27 ~~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~  101 (318)
T 3lxp_A           27 VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI-----IKYKGC  101 (318)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTB-----CCEEEE
T ss_pred             eecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcch-----hhEEEE
Confidence            566667 9999999999999988764    4478899999997542  446778999999999998887     999999


Q ss_pred             eee--CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccC
Q 024661          162 FDY--RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY  238 (264)
Q Consensus       162 ~~~--~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Df  238 (264)
                      +.+  ...+++||||+ +++|.+++...   .+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+||
T Consensus       102 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Df  178 (318)
T 3lxp_A          102 CEDAGAASLQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDF  178 (318)
T ss_dssp             EEETTTTEEEEEECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCG
T ss_pred             EecCCCceEEEEEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCc
Confidence            987  47899999999 88999999775   4999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcCCC---------CcccceeeeeceeEe
Q 024661          239 KVPSPRHA---------FSFQTFLSMASRVYI  261 (264)
Q Consensus       239 g~a~~~~~---------~~~~~~~y~ape~~~  261 (264)
                      |++.....         ...++..|+|||++.
T Consensus       179 g~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  210 (318)
T 3lxp_A          179 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLK  210 (318)
T ss_dssp             GGCEECCTTCSEEEC---CCCCGGGCCHHHHH
T ss_pred             cccccccccccccccccCCCCCceeeChHHhc
Confidence            99976432         223566799999764

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.97  E-value=1.3e-31  Score=242.54  Aligned_cols=164  Identities=24%  Similarity=0.331  Sum_probs=137.5

Q ss_pred             CCCeEEEe-ecccCccEEEEEEEeCC--CCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           91 TPRYRILS-KMGEGTFGQVVECFDNE--KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        91 ~~~y~~~~-~lg~G~~g~V~~~~~~~--~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .+++.+.+ +||+|+||.||+|.+..  ++..||||+++..  ....+.+.+|+++++.++|+|+     +++++++.+ 
T Consensus       334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpni-----v~l~~~~~~-  407 (613)
T 2ozo_A          334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYI-----VRLIGVCQA-  407 (613)
T ss_dssp             TTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTB-----CCEEEEEES-
T ss_pred             ccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCE-----eeEEEEecc-
Confidence            34566666 89999999999998753  4567999999753  3456788999999999998887     999999876 


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      +.+|+||||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       408 ~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~  486 (613)
T 2ozo_A          408 EALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKAL  486 (613)
T ss_dssp             SSEEEEEECCTTCBHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTC
T ss_pred             CCeEEEEEeCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccc
Confidence            5699999999 899999997643 46999999999999999999999999999999999999999999999999999864


Q ss_pred             CCC---------cccceeeeeceeEe
Q 024661          245 HAF---------SFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~~~---------~~~~~~y~ape~~~  261 (264)
                      ...         ..++..|||||++.
T Consensus       487 ~~~~~~~~~~~~~~~~~~y~APE~~~  512 (613)
T 2ozo_A          487 GADDSYYTARSAGKWPLKWYAPECIN  512 (613)
T ss_dssp             C--------------CCTTSCHHHHH
T ss_pred             cCCCceeeeccCCCCccceeCHhhhc
Confidence            321         12345799999764

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=1e-31  Score=226.41  Aligned_cols=168  Identities=20%  Similarity=0.274  Sum_probs=139.3

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCC----cEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEcee
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKK----ELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNW  161 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~----~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~  161 (264)
                      +...++|++.+.||+|+||.||+|.+..++    ..||+|+++..  ......+.+|+.+++.+.|+|+     ++++++
T Consensus        40 ~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~  114 (333)
T 1mqb_A           40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI-----IRLEGV  114 (333)
T ss_dssp             BCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTB-----CCEEEE
T ss_pred             cCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCC-----CcEEEE
Confidence            344578999999999999999999987553    45999998743  3445678899999999998887     999999


Q ss_pred             eeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCC
Q 024661          162 FDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV  240 (264)
Q Consensus       162 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~  240 (264)
                      +.+.+..++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus       115 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~  193 (333)
T 1mqb_A          115 ISKYKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGL  193 (333)
T ss_dssp             ECSSSSEEEEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC
T ss_pred             EecCCCcEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCc
Confidence            99999999999999 889999998653 4699999999999999999999999999999999999999999999999999


Q ss_pred             CCcCCCC---------cccceeeeeceeEe
Q 024661          241 PSPRHAF---------SFQTFLSMASRVYI  261 (264)
Q Consensus       241 a~~~~~~---------~~~~~~y~ape~~~  261 (264)
                      +......         ..++..|+|||++.
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  223 (333)
T 1mqb_A          194 SRVLEDDPEATYTTSGGKIPIRWTAPEAIS  223 (333)
T ss_dssp             -----------------CCCGGGSCHHHHH
T ss_pred             chhhccccccccccCCCCccccccCchhcc
Confidence            9764322         12356799999764

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.97  E-value=8.1e-33  Score=239.04  Aligned_cols=168  Identities=21%  Similarity=0.362  Sum_probs=131.9

Q ss_pred             ccCCCeEE-EeecccCccEEEEEEEeC--CCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee-
Q 024661           89 NLTPRYRI-LSKMGEGTFGQVVECFDN--EKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-  164 (264)
Q Consensus        89 ~~~~~y~~-~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~-  164 (264)
                      .+.+.|.+ +++||+|+||.||+|.++  .+++.||+|++... .....+.+|+.+++.++|+|+     +++++++.. 
T Consensus        17 ~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~E~~~l~~l~hpni-----v~~~~~~~~~   90 (405)
T 3rgf_A           17 RVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT-GISMSACREIALLRELKHPNV-----ISLQKVFLSH   90 (405)
T ss_dssp             CHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS-SCCHHHHHHHHHHHHCCCTTB-----CCCCEEEEET
T ss_pred             hhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC-CCCHHHHHHHHHHHhcCCCCe-----eeEeeEEecC
Confidence            44566887 458999999999999965  56889999998753 233567889999999999888     999999854 


Q ss_pred             -CCEEEEEEecCCCCHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEe----ecCCc
Q 024661          165 -RNHICIVFEKLGPSLYDFLRKNS-------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL----VSAEY  232 (264)
Q Consensus       165 -~~~~~lv~e~~~~~L~~~l~~~~-------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili----~~~~~  232 (264)
                       ...+|+||||++++|.+++....       ...+++..++.++.||+.||.|||++||+||||||+|||+    +.++.
T Consensus        91 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~  170 (405)
T 3rgf_A           91 ADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGR  170 (405)
T ss_dssp             TTTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTC
T ss_pred             CCCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCc
Confidence             77999999999889999887321       1248999999999999999999999999999999999999    67789


Q ss_pred             EEeccCCCCCcCCC---------CcccceeeeeceeEee
Q 024661          233 VKVPDYKVPSPRHA---------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       233 v~l~Dfg~a~~~~~---------~~~~~~~y~ape~~~~  262 (264)
                      +||+|||+|+....         ...+|..|+|||++.+
T Consensus       171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  209 (405)
T 3rgf_A          171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG  209 (405)
T ss_dssp             EEECCTTCCC----------------CCCTTCCHHHHTT
T ss_pred             EEEEECCCceecCCCCcccccCCCceecCcccCchhhcC
Confidence            99999999976432         2357889999998754

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.97  E-value=2.6e-32  Score=231.02  Aligned_cols=171  Identities=20%  Similarity=0.350  Sum_probs=148.5

Q ss_pred             eeCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhH------------------HHHHHHHHHHHHHh
Q 024661           85 AIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYR------------------EAAMIEIDVLQRLA  146 (264)
Q Consensus        85 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~------------------~~~~~e~~~l~~l~  146 (264)
                      ..++...++|++.+.||+|+||.||+|.+  +++.||+|++.......                  +.+.+|+.+++.++
T Consensus        24 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  101 (348)
T 2pml_X           24 KEKDKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIK  101 (348)
T ss_dssp             SSSCEEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCC
T ss_pred             hhcccccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCC
Confidence            34455668899999999999999999998  89999999997543211                  78899999999999


Q ss_pred             ccCCCCcceEEEceeeeeCCEEEEEEecC-CCCHHHH------HHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeec
Q 024661          147 RHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDF------LRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHT  218 (264)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~------l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~  218 (264)
                      |+|+     +++++++.+.+..|+||||+ +++|.++      +.......+++..++.++.||+.||.|||+ +||+|+
T Consensus       102 h~~i-----~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~  176 (348)
T 2pml_X          102 NEYC-----LTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHR  176 (348)
T ss_dssp             CTTB-----CCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECC
T ss_pred             CCCc-----ceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeec
Confidence            8887     99999999999999999999 7899998      655334579999999999999999999999 999999


Q ss_pred             CCCCCCEEeecCCcEEeccCCCCCcCCC----CcccceeeeeceeEee
Q 024661          219 DLKPENILLVSAEYVKVPDYKVPSPRHA----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       219 dikp~Nili~~~~~v~l~Dfg~a~~~~~----~~~~~~~y~ape~~~~  262 (264)
                      ||||+|||++.++.++|+|||++.....    ...++..|+|||++.+
T Consensus       177 dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~  224 (348)
T 2pml_X          177 DVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSN  224 (348)
T ss_dssp             CCCGGGEEECTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSS
T ss_pred             CCChHhEEEcCCCcEEEeccccccccccccccCCCCCcCccCchhhcC
Confidence            9999999999999999999999976432    3457889999998653

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.97  E-value=7.1e-32  Score=222.59  Aligned_cols=168  Identities=26%  Similarity=0.452  Sum_probs=147.0

Q ss_pred             CCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeee
Q 024661           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~  163 (264)
                      ...+.++|++.+.||+|+||.||+|.+..+++.||+|++....   ...+.+.+|+.+++.++|+++     +++++++.
T Consensus        17 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~   91 (287)
T 2wei_A           17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI-----MKLFEILE   91 (287)
T ss_dssp             THHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTB-----CCEEEEEE
T ss_pred             HHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCc-----cEEEEEEe
Confidence            3456678999999999999999999999999999999987532   345678899999999988887     99999999


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC---CcEEeccCC
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA---EYVKVPDYK  239 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~---~~v~l~Dfg  239 (264)
                      +.+..|+|||++ +++|.+++....  .+++..++.++.||+.||.|||++|++|+||||+||+++.+   +.+||+|||
T Consensus        92 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg  169 (287)
T 2wei_A           92 DSSSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFG  169 (287)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTT
T ss_pred             CCCeEEEEEEccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccC
Confidence            999999999999 899999988765  79999999999999999999999999999999999999764   479999999


Q ss_pred             CCCcCCC-----CcccceeeeeceeEe
Q 024661          240 VPSPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       240 ~a~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      ++.....     ...++..|+|||++.
T Consensus       170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~  196 (287)
T 2wei_A          170 LSTCFQQNTKMKDRIGTAYYIAPEVLR  196 (287)
T ss_dssp             GGGTBCCCSSCSCHHHHHTTCCHHHHT
T ss_pred             cceeecCCCccccccCcccccChHHhc
Confidence            9875433     224788899999754

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.97  E-value=1.6e-31  Score=224.38  Aligned_cols=167  Identities=22%  Similarity=0.322  Sum_probs=141.9

Q ss_pred             ccCCCeEEEeecccCccEEEEEEE----eCCCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeee
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECF----DNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~----~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~  163 (264)
                      ...++|++.+.||+|+||.||+|.    +..+++.||+|++... ....+.+.+|+.+++.++|+|+     +++++++.
T Consensus        38 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~  112 (326)
T 2w1i_A           38 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI-----VKYKGVCY  112 (326)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTB-----CCEEEEEC
T ss_pred             cCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCe-----eeEEEEEE
Confidence            344679999999999999999998    4667999999998753 3445678999999999998887     88988876


Q ss_pred             eC--CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCC
Q 024661          164 YR--NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV  240 (264)
Q Consensus       164 ~~--~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~  240 (264)
                      ..  ..+++|||++ +++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||+
T Consensus       113 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~  191 (326)
T 2w1i_A          113 SAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL  191 (326)
T ss_dssp             C----CCEEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred             ecCCCceEEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcc
Confidence            54  3789999999 889999998764 3699999999999999999999999999999999999999999999999999


Q ss_pred             CCcCCCC---------cccceeeeeceeEe
Q 024661          241 PSPRHAF---------SFQTFLSMASRVYI  261 (264)
Q Consensus       241 a~~~~~~---------~~~~~~y~ape~~~  261 (264)
                      +......         ..++..|+|||++.
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  221 (326)
T 2w1i_A          192 TKVLPQDKEYYKVKEPGESPIFWYAPESLT  221 (326)
T ss_dssp             CEECCSSCSEEECSSCCSCCGGGCCHHHHH
T ss_pred             hhhccccccccccccCCCCceeEECchhhc
Confidence            9764322         23456699999753

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.97  E-value=1.2e-31  Score=225.50  Aligned_cols=165  Identities=19%  Similarity=0.272  Sum_probs=135.9

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEE----EEEEEec--hhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeee
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELV----AIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~v----aiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~  163 (264)
                      ..++|++.+.||+|+||.||+|.+..+++.+    ++|.+..  .....+.+.+|+.+++.++|+|+     +++++++.
T Consensus        13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~   87 (327)
T 3lzb_A           13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV-----CRLLGICL   87 (327)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTB-----CCCCEEEE
T ss_pred             CHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCe-----eEEEEEEe
Confidence            3478999999999999999999998888765    5555542  23456788899999999999888     99999988


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                      +.. .++|+|++ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus        88 ~~~-~~~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~  165 (327)
T 3lzb_A           88 TST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAK  165 (327)
T ss_dssp             SSS-EEEEECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred             cCC-ceEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence            765 77888988 999999998754 469999999999999999999999999999999999999999999999999997


Q ss_pred             cCCC--------CcccceeeeeceeEe
Q 024661          243 PRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       243 ~~~~--------~~~~~~~y~ape~~~  261 (264)
                      ....        ...++..|+|||++.
T Consensus       166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~  192 (327)
T 3lzb_A          166 LLGAEEKEYHAEGGKVPIKWMALESIL  192 (327)
T ss_dssp             --------------CCCGGGSCHHHHH
T ss_pred             EccCccccccccCCCccccccCHHHHc
Confidence            6432        223456799999764

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.97  E-value=4.8e-32  Score=230.05  Aligned_cols=165  Identities=21%  Similarity=0.341  Sum_probs=141.4

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .+.++|.+.+.||+|+||.||+|.+..+|+.||+|++...   ....+.+.+|+.+++.++|+|+     +++++++...
T Consensus        21 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~   95 (353)
T 3coi_A           21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV-----IGLLDVFTPA   95 (353)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTB-----CCCSEEECSC
T ss_pred             ccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCc-----ccHhheEecc
Confidence            3457899999999999999999999999999999998643   3345678899999999999887     9999998775


Q ss_pred             CE------EEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          166 NH------ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       166 ~~------~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                      ..      +|+|||++.++|.+++..    .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus        96 ~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg  171 (353)
T 3coi_A           96 SSLRNFYDFYLVMPFMQTDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFG  171 (353)
T ss_dssp             SSGGGCCCCEEEEECCSEEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTT
T ss_pred             cccccceeEEEEeccccCCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecc
Confidence            43      599999998888877642    58999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCCC---CcccceeeeeceeEee
Q 024661          240 VPSPRHA---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       240 ~a~~~~~---~~~~~~~y~ape~~~~  262 (264)
                      ++.....   ...+|..|+|||++.+
T Consensus       172 ~~~~~~~~~~~~~~t~~y~aPE~~~~  197 (353)
T 3coi_A          172 LARHADAEMTGYVVTRWYRAPEVILS  197 (353)
T ss_dssp             CTTC--------CCSBCCSCHHHHSC
T ss_pred             cccCCCCCccccccCcCcCCHHHHhC
Confidence            9986443   2357889999998654

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.97  E-value=4.1e-32  Score=229.16  Aligned_cols=168  Identities=21%  Similarity=0.262  Sum_probs=144.0

Q ss_pred             EEeeCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHH--HhccCCCCcceEEEce
Q 024661           83 VFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR--LARHDIGGTRCVQIRN  160 (264)
Q Consensus        83 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~--l~~~~~~~~~~~~~~~  160 (264)
                      ++..++.+.++|++.+.||+|+||.||+|.+.  ++.||+|++...  ....+.+|.++++.  +.|+|+     +++++
T Consensus        33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni-----~~~~~  103 (342)
T 1b6c_B           33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENI-----LGFIA  103 (342)
T ss_dssp             CHHHHHHHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTB-----CCEEE
T ss_pred             ceeecccccccEEEEeeecCCCCcEEEEEEEc--CccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcE-----EEEEe
Confidence            34456677789999999999999999999984  889999998743  34567788888888  567766     99999


Q ss_pred             eeeeCC----EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH--------HCCCeecCCCCCCEEe
Q 024661          161 WFDYRN----HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH--------ELRLIHTDLKPENILL  227 (264)
Q Consensus       161 ~~~~~~----~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH--------~~~ivH~dikp~Nili  227 (264)
                      ++....    ..|+||||+ +++|.+++...   .+++..++.++.|++.||.|||        ++||+||||||+|||+
T Consensus       104 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll  180 (342)
T 1b6c_B          104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV  180 (342)
T ss_dssp             EEECCCSSCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEE
T ss_pred             eecccCCccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEE
Confidence            988865    899999999 88999999874   5999999999999999999999        8999999999999999


Q ss_pred             ecCCcEEeccCCCCCcCCC----------CcccceeeeeceeEee
Q 024661          228 VSAEYVKVPDYKVPSPRHA----------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       228 ~~~~~v~l~Dfg~a~~~~~----------~~~~~~~y~ape~~~~  262 (264)
                      +.++++||+|||++.....          ...+|..|+|||++.+
T Consensus       181 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  225 (342)
T 1b6c_B          181 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD  225 (342)
T ss_dssp             CTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTS
T ss_pred             CCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcc
Confidence            9999999999999965322          2357889999998653

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.97  E-value=8.4e-32  Score=226.20  Aligned_cols=165  Identities=21%  Similarity=0.304  Sum_probs=140.0

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEE--EEEEEech--hhhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeCC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELV--AIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~v--aiK~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      ++|++.+.||+|+||.||+|.+..++..+  ++|.+...  ....+.+.+|+++++.+ .|+|+     +++++++.+.+
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~i-----v~~~~~~~~~~   99 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI-----INLLGACEHRG   99 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTB-----CCEEEEEEETT
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCch-----hhhceeeeeCC
Confidence            67999999999999999999998888765  89988742  33456788899999999 77777     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~  231 (264)
                      .+|+||||+ +++|.+++....              ...+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~  179 (327)
T 1fvr_A          100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY  179 (327)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG
T ss_pred             ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCC
Confidence            999999999 889999998642              23689999999999999999999999999999999999999999


Q ss_pred             cEEeccCCCCCcCCC-----CcccceeeeeceeEe
Q 024661          232 YVKVPDYKVPSPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       232 ~v~l~Dfg~a~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      .+||+|||++.....     ...++..|+|||++.
T Consensus       180 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~  214 (327)
T 1fvr_A          180 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLN  214 (327)
T ss_dssp             CEEECCTTCEESSCEECCC----CCTTTCCHHHHH
T ss_pred             eEEEcccCcCccccccccccCCCCCccccChhhhc
Confidence            999999999874332     223566799999753

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.97  E-value=2.2e-32  Score=250.71  Aligned_cols=167  Identities=23%  Similarity=0.325  Sum_probs=142.2

Q ss_pred             eeCCccCCCeEEEeecccCccEEEEEEEeCC-CCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEcee
Q 024661           85 AIGENLTPRYRILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNW  161 (264)
Q Consensus        85 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~  161 (264)
                      ..++.+.++|++.+.||+|+||.||+|.+.. +++.||||++...  ......+.+|+.+++.++|+|+     ++++++
T Consensus        73 ~~g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~i-----v~~~~~  147 (681)
T 2pzi_A           73 NPGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSI-----VQIFNF  147 (681)
T ss_dssp             CTTCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTB-----CCEEEE
T ss_pred             CCCCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCc-----CeEeee
Confidence            4567788999999999999999999999976 6899999988642  3445678899999999998887     999999


Q ss_pred             eeeCCE-----EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEe
Q 024661          162 FDYRNH-----ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKV  235 (264)
Q Consensus       162 ~~~~~~-----~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l  235 (264)
                      +...+.     .||||||+ +++|.+++..    .+++..++.++.||+.||.|||++||+||||||+|||++.+ .+||
T Consensus       148 ~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl  222 (681)
T 2pzi_A          148 VEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKL  222 (681)
T ss_dssp             EEEECTTSCEEEEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEE
T ss_pred             EeecCCCCCceeEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEE
Confidence            987655     79999999 8899887654    69999999999999999999999999999999999999875 9999


Q ss_pred             ccCCCCCcCCC--CcccceeeeeceeEe
Q 024661          236 PDYKVPSPRHA--FSFQTFLSMASRVYI  261 (264)
Q Consensus       236 ~Dfg~a~~~~~--~~~~~~~y~ape~~~  261 (264)
                      +|||++.....  ...+|..|||||++.
T Consensus       223 ~DFG~a~~~~~~~~~~gt~~y~aPE~~~  250 (681)
T 2pzi_A          223 IDLGAVSRINSFGYLYGTPGFQAPEIVR  250 (681)
T ss_dssp             CCCTTCEETTCCSCCCCCTTTSCTTHHH
T ss_pred             EecccchhcccCCccCCCccccCHHHHc
Confidence            99999976543  345899999999764

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=2.8e-31  Score=218.99  Aligned_cols=164  Identities=25%  Similarity=0.349  Sum_probs=139.3

Q ss_pred             CCCeEEEe-ecccCccEEEEEEEeC--CCCcEEEEEEEec--hhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           91 TPRYRILS-KMGEGTFGQVVECFDN--EKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        91 ~~~y~~~~-~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .++|.+.+ .||+|+||.||+|.+.  .++..||+|+++.  .....+.+.+|+++++.+.|+|+     +++++++ ..
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~-~~   81 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYI-----VRLIGVC-QA   81 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEE-ES
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCE-----eEEEEEe-cC
Confidence            35688877 9999999999999864  4678899999975  33456788999999999998887     9999988 45


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      +..++|||++ +++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++...
T Consensus        82 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~  160 (287)
T 1u59_A           82 EALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL  160 (287)
T ss_dssp             SSEEEEEECCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             CCcEEEEEeCCCCCHHHHHHhCC-ccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeee
Confidence            6799999999 889999997543 46999999999999999999999999999999999999999999999999999754


Q ss_pred             CC---------CcccceeeeeceeEe
Q 024661          245 HA---------FSFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~~---------~~~~~~~y~ape~~~  261 (264)
                      ..         ...++..|+|||++.
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~  186 (287)
T 1u59_A          161 GADDSYYTARSAGKWPLKWYAPECIN  186 (287)
T ss_dssp             TTCSCEECCCCSSCCCGGGCCHHHHH
T ss_pred             ccCcceeeccccccccccccCHHHhc
Confidence            32         223467799999753

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.97  E-value=4.1e-32  Score=221.68  Aligned_cols=165  Identities=12%  Similarity=0.121  Sum_probs=143.4

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC-
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR-  165 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~-  165 (264)
                      ..++|++.+.||+|+||.||+|.+.  ++.+|+|+++..   ....+.+.+|+.+++.++|+|+     +++++++.+. 
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~   80 (271)
T 3kmu_A            8 DFKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNV-----LPVLGACQSPP   80 (271)
T ss_dssp             CGGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTE-----ECEEEEECTTT
T ss_pred             CHHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCch-----hheEEEEccCC
Confidence            3467999999999999999999985  788999998753   3445678899999999888777     9999999886 


Q ss_pred             -CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEeecCCcEEeccCCCC
Q 024661          166 -NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLVSAEYVKVPDYKVP  241 (264)
Q Consensus       166 -~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dikp~Nili~~~~~v~l~Dfg~a  241 (264)
                       +..++||||+ +++|.+++.......+++..++.++.||+.||.|||++|  |+|+||||+|||++.++.++|+|||++
T Consensus        81 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~  160 (271)
T 3kmu_A           81 APHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVK  160 (271)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSC
T ss_pred             CCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccce
Confidence             7899999999 889999999766456999999999999999999999999  999999999999999999999888776


Q ss_pred             CcCC-CCcccceeeeeceeEe
Q 024661          242 SPRH-AFSFQTFLSMASRVYI  261 (264)
Q Consensus       242 ~~~~-~~~~~~~~y~ape~~~  261 (264)
                      .... ....+|..|+|||++.
T Consensus       161 ~~~~~~~~~~t~~y~aPE~~~  181 (271)
T 3kmu_A          161 FSFQSPGRMYAPAWVAPEALQ  181 (271)
T ss_dssp             CTTSCTTCBSCGGGSCHHHHH
T ss_pred             eeecccCccCCccccChhhhc
Confidence            5433 3446889999999865

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.97  E-value=2.2e-32  Score=229.66  Aligned_cols=164  Identities=23%  Similarity=0.279  Sum_probs=136.7

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcE----EEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKEL----VAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~----vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      .++|++.+.||+|+||.||+|.+..+++.    +++|.+....  ...+.+.+|+.+++.+.|+|+     +++++++. 
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~-   85 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI-----VRLLGLCP-   85 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTB-----CCEEEEEC-
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCc-----CeEEEEEc-
Confidence            46799999999999999999999888776    6677664322  223456779999999988887     99999886 


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      ++..++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++++||+|||++..
T Consensus        86 ~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~  164 (325)
T 3kex_A           86 GSSLQLVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADL  164 (325)
T ss_dssp             BSSEEEEEECCTTCBSHHHHHSSG-GGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred             CCccEEEEEeCCCCCHHHHHHHcc-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccc
Confidence            46689999999 899999998653 3689999999999999999999999999999999999999999999999999976


Q ss_pred             CCC--------CcccceeeeeceeEe
Q 024661          244 RHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~--------~~~~~~~y~ape~~~  261 (264)
                      ...        ...++..|+|||++.
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~aPE~~~  190 (325)
T 3kex_A          165 LPPDDKQLLYSEAKTPIKWMALESIH  190 (325)
T ss_dssp             SCCCTTCCC-----CCTTTSCHHHHH
T ss_pred             cCcccccccccCCCCcccccChHHhc
Confidence            432        223556799999764

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.97  E-value=1.4e-31  Score=218.75  Aligned_cols=162  Identities=24%  Similarity=0.365  Sum_probs=132.7

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ..++|++.+.||+|+||.||+|.+.  ++.+|+|+++...     ...+.+.+|+++++.++|+|+     +++++++.+
T Consensus         5 ~~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~   77 (271)
T 3dtc_A            5 DFAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNI-----IALRGVCLK   77 (271)
T ss_dssp             CTTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTB-----CCEEEEECC
T ss_pred             chhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCE-----eeEEEEEec
Confidence            3468999999999999999999975  7889999986432     234678899999999999887     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCCCCEEeec--------CCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR---LIHTDLKPENILLVS--------AEY  232 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dikp~Nili~~--------~~~  232 (264)
                      .+..|+||||+ +++|.+++...   .+++..++.++.|++.||.|||++|   |+||||||+|||++.        ++.
T Consensus        78 ~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~  154 (271)
T 3dtc_A           78 EPNLCLVMEFARGGPLNRVLSGK---RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKI  154 (271)
T ss_dssp             C--CEEEEECCTTEEHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCC
T ss_pred             CCceEEEEEcCCCCCHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcc
Confidence            99999999999 89999998643   6999999999999999999999999   899999999999986        678


Q ss_pred             EEeccCCCCCcCCC----CcccceeeeeceeEe
Q 024661          233 VKVPDYKVPSPRHA----FSFQTFLSMASRVYI  261 (264)
Q Consensus       233 v~l~Dfg~a~~~~~----~~~~~~~y~ape~~~  261 (264)
                      ++|+|||++.....    ...++..|+|||++.
T Consensus       155 ~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~  187 (271)
T 3dtc_A          155 LKITDFGLAREWHRTTKMSAAGAYAWMAPEVIR  187 (271)
T ss_dssp             EEECCCCC-------------CCGGGSCHHHHH
T ss_pred             eEEccCCcccccccccccCCCCccceeCHHHhc
Confidence            99999999975332    335788999999764

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.97  E-value=1.6e-31  Score=220.87  Aligned_cols=163  Identities=22%  Similarity=0.318  Sum_probs=138.9

Q ss_pred             CCCeEEEe-ecccCccEEEEEEEe--CCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           91 TPRYRILS-KMGEGTFGQVVECFD--NEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        91 ~~~y~~~~-~lg~G~~g~V~~~~~--~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      .++|++.+ .||+|+||.||+|.+  ..+++.||+|+++..   ....+.+.+|+.+++.+.|+|+     +++++++ .
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~-~   88 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI-----VRMIGIC-E   88 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTB-----CCEEEEE-E
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCE-----EEEEEEE-C
Confidence            36799998 999999999999954  566789999998743   2345778899999999998887     8999988 5


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      .+..|+|||++ +++|.+++....  .+++..++.++.||+.||.|||++||+|+||||+|||++.++.++|+|||++..
T Consensus        89 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  166 (291)
T 1xbb_A           89 AESWMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKA  166 (291)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             CCCcEEEEEeCCCCCHHHHHHhCc--CCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence            67789999999 899999998765  699999999999999999999999999999999999999999999999999975


Q ss_pred             CCCC---------cccceeeeeceeEe
Q 024661          244 RHAF---------SFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~~---------~~~~~~y~ape~~~  261 (264)
                      ....         ..++..|+|||++.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~  193 (291)
T 1xbb_A          167 LRADENYYKAQTHGKWPVKWYAPECIN  193 (291)
T ss_dssp             CCTTCSEEEC----CCCGGGCCHHHHH
T ss_pred             eccCCCcccccccCCCCceeeChHHhc
Confidence            4321         12456799999753

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.97  E-value=3.7e-31  Score=218.35  Aligned_cols=150  Identities=16%  Similarity=0.094  Sum_probs=133.3

Q ss_pred             EeeCC-ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech----hhhHHHHHHHHHHHHHHhccCCCCcceEEE
Q 024661           84 FAIGE-NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQI  158 (264)
Q Consensus        84 ~~~~~-~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~  158 (264)
                      +..++ .+.++|++.+.||+|+||.||+|.+..+++.||+|++...    ....+.+.+|+.+++.+.|+|+     +++
T Consensus        22 ~~~g~~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i-----v~~   96 (286)
T 3uqc_A           22 LVPGARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGV-----ARV   96 (286)
T ss_dssp             CCTTCEETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTB-----CCE
T ss_pred             CCCCCEEecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCc-----cee
Confidence            34455 6778999999999999999999999999999999999754    2344778899999999988887     999


Q ss_pred             ceeeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEecc
Q 024661          159 RNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPD  237 (264)
Q Consensus       159 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~D  237 (264)
                      ++++.+.+..|+||||+ +++|.+++..    ......+..++.||+.||+|||++||+||||||+|||++.+|.+||++
T Consensus        97 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~----~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~  172 (286)
T 3uqc_A           97 LDVVHTRAGGLVVAEWIRGGSLQEVADT----SPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAY  172 (286)
T ss_dssp             EEEEEETTEEEEEEECCCEEEHHHHHTT----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECS
T ss_pred             eEEEEECCcEEEEEEecCCCCHHHHHhc----CCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEe
Confidence            99999999999999999 8999999854    246667899999999999999999999999999999999999999998


Q ss_pred             CCCCC
Q 024661          238 YKVPS  242 (264)
Q Consensus       238 fg~a~  242 (264)
                      +|...
T Consensus       173 ~~~~~  177 (286)
T 3uqc_A          173 PATMP  177 (286)
T ss_dssp             CCCCT
T ss_pred             ccccC
Confidence            87654

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.97  E-value=1e-31  Score=224.34  Aligned_cols=167  Identities=21%  Similarity=0.281  Sum_probs=140.6

Q ss_pred             cCCCeEEEeecccCccEEEEEEEe-----CCCCcEEEEEEEech--hhhHHHHHHHHHHHHHH-hccCCCCcceEEEcee
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFD-----NEKKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNW  161 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~-----~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~  161 (264)
                      ..++|++.+.||+|+||.||+|.+     ..+++.||+|+++..  ....+.+.+|+.+++.+ +|+|+     ++++++
T Consensus        25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~i-----v~~~~~   99 (316)
T 2xir_A           25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV-----VNLLGA   99 (316)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTB-----CCEEEE
T ss_pred             chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCe-----eeEEEE
Confidence            447899999999999999999985     456789999999753  23456788999999999 56776     999998


Q ss_pred             eeeC-CEEEEEEecC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 024661          162 FDYR-NHICIVFEKL-GPSLYDFLRKNSY--------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENI  225 (264)
Q Consensus       162 ~~~~-~~~~lv~e~~-~~~L~~~l~~~~~--------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Ni  225 (264)
                      +... ..+++||||+ +++|.+++.....              ..+++..++.++.||+.||.|||++||+||||||+||
T Consensus       100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Ni  179 (316)
T 2xir_A          100 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI  179 (316)
T ss_dssp             ECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             EecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceE
Confidence            8775 4599999999 8899999987542              1289999999999999999999999999999999999


Q ss_pred             EeecCCcEEeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          226 LLVSAEYVKVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       226 li~~~~~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      |++.++.+||+|||++.....        ...+|..|+|||++.
T Consensus       180 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~  223 (316)
T 2xir_A          180 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF  223 (316)
T ss_dssp             EECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHH
T ss_pred             EECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhc
Confidence            999999999999999976432        223566799999763

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.97  E-value=7.5e-32  Score=232.19  Aligned_cols=167  Identities=24%  Similarity=0.372  Sum_probs=136.3

Q ss_pred             CCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC-
Q 024661           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR-  165 (264)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~-  165 (264)
                      ++....+|++.+.||+|+||.||+|.+..+++ +|+|.+......   ..+|+++++.++|+|+     +++++++... 
T Consensus        35 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~---~~~E~~il~~l~h~ni-----v~l~~~~~~~~  105 (394)
T 4e7w_A           35 GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF---KNRELQIMRIVKHPNV-----VDLKAFFYSNG  105 (394)
T ss_dssp             CCEEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS---CCHHHHHHHTCCCTTB-----CCEEEEEEEES
T ss_pred             CCcccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch---HHHHHHHHHhCCCCCc-----ceEEEEEEecC
Confidence            34555679999999999999999999987776 788877643322   2369999999999888     9999988543 


Q ss_pred             -----CEEEEEEecCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEee-cCCcEEecc
Q 024661          166 -----NHICIVFEKLGPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV-SAEYVKVPD  237 (264)
Q Consensus       166 -----~~~~lv~e~~~~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~-~~~~v~l~D  237 (264)
                           ..+|+||||+.+++.+.+..  .....+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|
T Consensus       106 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~D  185 (394)
T 4e7w_A          106 DKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLID  185 (394)
T ss_dssp             SSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECC
T ss_pred             CCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEee
Confidence                 34899999997777666552  1234799999999999999999999999999999999999999 789999999


Q ss_pred             CCCCCcCC-----CCcccceeeeeceeEee
Q 024661          238 YKVPSPRH-----AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       238 fg~a~~~~-----~~~~~~~~y~ape~~~~  262 (264)
                      ||+|+...     ....+|..|+|||++.+
T Consensus       186 FG~a~~~~~~~~~~~~~~t~~y~aPE~~~~  215 (394)
T 4e7w_A          186 FGSAKILIAGEPNVSYICSRYYRAPELIFG  215 (394)
T ss_dssp             CTTCEECCTTCCCCSSCSCGGGCCHHHHTT
T ss_pred             CCCcccccCCCCCcccccCcCccCHHHHcC
Confidence            99996532     23457889999998643

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.97  E-value=6.3e-32  Score=221.80  Aligned_cols=166  Identities=20%  Similarity=0.279  Sum_probs=142.5

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee--C
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--R  165 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~--~  165 (264)
                      .++|++.+.||+|+||.||+|.+..+++.|++|++...   ....+.+.+|+.+++.++|+|+     +++++++.+  .
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~~   79 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI-----VRYYDRIIDRTN   79 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEEEEGGG
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCC-----CeEEEEEecCCC
Confidence            36799999999999999999999999999999999743   3456778899999999998887     999998744  6


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCC-----CeecCCCCCCEEeecCCcEEecc
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHELR-----LIHTDLKPENILLVSAEYVKVPD  237 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-----ivH~dikp~Nili~~~~~v~l~D  237 (264)
                      ..+|+||||+ +++|.+++....  ...+++..++.++.|++.||+|||++|     |+|+||||+|||++.++.+||+|
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~d  159 (279)
T 2w5a_A           80 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGD  159 (279)
T ss_dssp             TEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECC
T ss_pred             ceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEec
Confidence            7899999999 789999998532  235999999999999999999999999     99999999999999999999999


Q ss_pred             CCCCCcCCCC------cccceeeeeceeEe
Q 024661          238 YKVPSPRHAF------SFQTFLSMASRVYI  261 (264)
Q Consensus       238 fg~a~~~~~~------~~~~~~y~ape~~~  261 (264)
                      ||++......      ..++..|+|||++.
T Consensus       160 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~  189 (279)
T 2w5a_A          160 FGLARILNHDTSFAKTFVGTPYYMSPEQMN  189 (279)
T ss_dssp             CCHHHHC---CHHHHHHHSCCTTCCHHHHH
T ss_pred             CchheeeccccccccccCCCccccChHHhc
Confidence            9998764432      24788899999764

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.97  E-value=2.4e-32  Score=229.31  Aligned_cols=170  Identities=17%  Similarity=0.211  Sum_probs=144.4

Q ss_pred             eCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeee
Q 024661           86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        86 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~  163 (264)
                      ......++|++.+.||+|+||.||+|.+ .+++.||+|++....  .....+.+|+.+++.+.|+|+     +++++++.
T Consensus        24 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~   97 (326)
T 3uim_A           24 ELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNL-----LRLRGFCM   97 (326)
T ss_dssp             HHHTTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTB-----CCCCEEEC
T ss_pred             HHHHHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCc-----cceEEEEe
Confidence            3446678899999999999999999985 468889999987533  223367889999999988887     99999999


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCCCCEEeecCCcEEecc
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLESVAFMHEL---RLIHTDLKPENILLVSAEYVKVPD  237 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp~Nili~~~~~v~l~D  237 (264)
                      +.+..++||||+ +++|.+++....  ...+++..++.++.|++.||.|||++   ||+||||||+|||++.++.+||+|
T Consensus        98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D  177 (326)
T 3uim_A           98 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD  177 (326)
T ss_dssp             CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECC
T ss_pred             cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEecc
Confidence            999999999999 889999998653  23499999999999999999999999   999999999999999999999999


Q ss_pred             CCCCCcCCC-------CcccceeeeeceeEe
Q 024661          238 YKVPSPRHA-------FSFQTFLSMASRVYI  261 (264)
Q Consensus       238 fg~a~~~~~-------~~~~~~~y~ape~~~  261 (264)
                      ||++.....       ...+|..|+|||++.
T Consensus       178 fg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  208 (326)
T 3uim_A          178 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS  208 (326)
T ss_dssp             CSSCEECCSSSSCEECCCCSCGGGCCHHHHH
T ss_pred             CccccccCcccccccccccCCcCccCHHHhc
Confidence            999975432       223788999999763

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.97  E-value=7.7e-32  Score=226.42  Aligned_cols=169  Identities=19%  Similarity=0.286  Sum_probs=139.3

Q ss_pred             CccCCCeEEEeecccCccEEEEEEE-----eCCCCcEEEEEEEec--hhhhHHHHHHHHHHHHHHhccCCCCcceEEEce
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECF-----DNEKKELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~-----~~~~~~~vaiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~  160 (264)
                      +...++|++.+.||+|+||.||+|.     +..+++.||+|++..  .......+.+|+.+++.+.|+|+     +++++
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~  100 (327)
T 2yfx_A           26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNI-----VRCIG  100 (327)
T ss_dssp             BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTB-----CCEEE
T ss_pred             cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCC-----CeEEE
Confidence            4556789999999999999999999     456788999999863  23455678899999999998887     99999


Q ss_pred             eeeeCCEEEEEEecC-CCCHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec---CC
Q 024661          161 WFDYRNHICIVFEKL-GPSLYDFLRKNSY-----RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS---AE  231 (264)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~---~~  231 (264)
                      ++.+....|+||||+ +++|.+++.....     ..+++..++.++.||+.||.|||++||+||||||+|||++.   +.
T Consensus       101 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~  180 (327)
T 2yfx_A          101 VSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR  180 (327)
T ss_dssp             EECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTC
T ss_pred             EEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcc
Confidence            999999999999999 8999999987532     34899999999999999999999999999999999999994   44


Q ss_pred             cEEeccCCCCCcC--------CCCcccceeeeeceeEe
Q 024661          232 YVKVPDYKVPSPR--------HAFSFQTFLSMASRVYI  261 (264)
Q Consensus       232 ~v~l~Dfg~a~~~--------~~~~~~~~~y~ape~~~  261 (264)
                      .++|+|||++...        .....++..|+|||++.
T Consensus       181 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  218 (327)
T 2yfx_A          181 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM  218 (327)
T ss_dssp             CEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHH
T ss_pred             eEEECccccccccccccccccCCCcCCCcceeCHhHhc
Confidence            6999999988632        12234677899999763

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=2.7e-31  Score=219.92  Aligned_cols=164  Identities=18%  Similarity=0.212  Sum_probs=139.1

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCc---EEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKE---LVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      .|.+.+.||+|+||.||+|.+..++.   .+|+|.+...  ....+.+.+|+.+++.++|+|+     +++++++.+.+.
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~   96 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV-----LALIGIMLPPEG   96 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTB-----CCCCEEECCSSS
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCe-----eeEEEEEecCCC
Confidence            47788999999999999999765544   7999998743  2445778899999999998887     999999977655


Q ss_pred             E-EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          168 I-CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       168 ~-~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      . ++|||++ +++|.+++.... ..+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus        97 ~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~  175 (298)
T 3pls_A           97 LPHVLLPYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDIL  175 (298)
T ss_dssp             CCEEEECCCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred             CcEEEEecccCCCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence            4 9999999 999999998643 468999999999999999999999999999999999999999999999999997532


Q ss_pred             C----------CcccceeeeeceeEee
Q 024661          246 A----------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~----------~~~~~~~y~ape~~~~  262 (264)
                      .          ...++..|+|||.+.+
T Consensus       176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~  202 (298)
T 3pls_A          176 DREYYSVQQHRHARLPVKWTALESLQT  202 (298)
T ss_dssp             TGGGGCSCCSSCTTCGGGGSCHHHHTT
T ss_pred             CCcccccccCcCCCCCccccChhhhcc
Confidence            2          2245778999997643

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.97  E-value=1.7e-31  Score=221.29  Aligned_cols=164  Identities=16%  Similarity=0.185  Sum_probs=137.3

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCC---CcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceee-eeC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWF-DYR  165 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~-~~~  165 (264)
                      .+|++.+.||+|+||.||+|.+..+   +..+++|.+...  ....+.+.+|+.+++.++|+|+     +++++++ ..+
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~   99 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV-----LSLLGICLRSE   99 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTB-----CCCCEEECCSS
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCE-----eeeeeEEEcCC
Confidence            4699999999999999999997544   345899988642  3445778899999999998887     9999974 556


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      +..|+||||+ +++|.+++.... ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus       100 ~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~  178 (298)
T 3f66_A          100 GSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM  178 (298)
T ss_dssp             SCCEEEEECCTTCBHHHHHHCTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred             CceEEEEeCCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccc
Confidence            7889999999 889999997643 46899999999999999999999999999999999999999999999999999754


Q ss_pred             CC----------CcccceeeeeceeEe
Q 024661          245 HA----------FSFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~~----------~~~~~~~y~ape~~~  261 (264)
                      ..          ...++..|+|||++.
T Consensus       179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~  205 (298)
T 3f66_A          179 YDKEYYSVHNKTGAKLPVKWMALESLQ  205 (298)
T ss_dssp             SCGGGCBC-----CCBCGGGSCHHHHH
T ss_pred             cccchhccccccCCCCCccccChHHhc
Confidence            32          223456799999764

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.97  E-value=2.2e-32  Score=226.88  Aligned_cols=168  Identities=24%  Similarity=0.298  Sum_probs=127.6

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      ...++|++.+.||+|+||.||+|.+..+++.||+|++...  ....+.+.+|+.+++.+.|+|+     +++++++...+
T Consensus        12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~~~~   86 (303)
T 2vwi_A           12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNI-----VSYYTSFVVKD   86 (303)
T ss_dssp             -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTB-----CCEEEEEESSS
T ss_pred             cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCE-----eeEEEEEeecC
Confidence            4457899999999999999999999999999999988643  2344667789988888888777     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhc------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKN------SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~------~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                      ..|+||||+ +++|.+++...      ....+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||
T Consensus        87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg  166 (303)
T 2vwi_A           87 ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFG  166 (303)
T ss_dssp             CEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCH
T ss_pred             CcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEecc
Confidence            999999999 89999999741      22468999999999999999999999999999999999999999999999999


Q ss_pred             CCCcCC-----------CCcccceeeeeceeEe
Q 024661          240 VPSPRH-----------AFSFQTFLSMASRVYI  261 (264)
Q Consensus       240 ~a~~~~-----------~~~~~~~~y~ape~~~  261 (264)
                      ++....           ....++..|+|||++.
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  199 (303)
T 2vwi_A          167 VSAFLATGGDITRNKVRKTFVGTPCWMAPEVME  199 (303)
T ss_dssp             HHHHCC---------------CCCTTCCHHHHH
T ss_pred             chheeccCCCccchhhhcccCCCccccCHHHhc
Confidence            875432           1235788899999763

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.97  E-value=4.1e-31  Score=217.29  Aligned_cols=165  Identities=22%  Similarity=0.276  Sum_probs=139.6

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCC---CCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNE---KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ..++|++.+.||+|+||.||+|.+..   ++..||+|++...  ....+.+.+|+.+++.++|+|+     +++++++.+
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~   84 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI-----VKLIGIIEE   84 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTB-----CCEEEEECS
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCc-----ceEEEEEcC
Confidence            44679999999999999999998654   3456999998753  3456788999999999999888     889988765


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                       +..|+|||++ +++|.+++.... ..+++..++.++.|++.||.|||++||+|+||||+|||++.++.+||+|||++..
T Consensus        85 -~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  162 (281)
T 3cc6_A           85 -EPTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY  162 (281)
T ss_dssp             -SSCEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred             -CCCEEEEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcc
Confidence             4568999999 899999998754 3589999999999999999999999999999999999999999999999999876


Q ss_pred             CCC-------CcccceeeeeceeEe
Q 024661          244 RHA-------FSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~-------~~~~~~~y~ape~~~  261 (264)
                      ...       ...++..|+|||++.
T Consensus       163 ~~~~~~~~~~~~~~~~~y~aPE~~~  187 (281)
T 3cc6_A          163 IEDEDYYKASVTRLPIKWMSPESIN  187 (281)
T ss_dssp             C---------CCCCCGGGCCHHHHH
T ss_pred             cccccccccccCCCCcceeCchhhc
Confidence            432       223566799999764

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.97  E-value=2.3e-31  Score=241.55  Aligned_cols=160  Identities=23%  Similarity=0.347  Sum_probs=134.6

Q ss_pred             eEEE-eecccCccEEEEEEEe--CCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           94 YRIL-SKMGEGTFGQVVECFD--NEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        94 y~~~-~~lg~G~~g~V~~~~~--~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      +.+. ++||+|+||.||+|.+  ..+++.||||+++...   ...+.+.+|+++++.++|+|+     +++++++.+ +.
T Consensus       370 ~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnI-----v~l~~~~~~-~~  443 (635)
T 4fl3_A          370 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI-----VRMIGICEA-ES  443 (635)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTB-----CCEEEEEES-SS
T ss_pred             ccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEec-CC
Confidence            4443 4799999999999955  4567889999997532   345789999999999999888     999998865 55


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      .++||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus       444 ~~lv~E~~~~g~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~  521 (635)
T 4fl3_A          444 WMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA  521 (635)
T ss_dssp             EEEEEECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC
T ss_pred             EEEEEEccCCCCHHHHHhhCC--CCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCcccccc
Confidence            88999999 899999998765  799999999999999999999999999999999999999999999999999875322


Q ss_pred             ---------CcccceeeeeceeEe
Q 024661          247 ---------FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ---------~~~~~~~y~ape~~~  261 (264)
                               ...++..|||||++.
T Consensus       522 ~~~~~~~~~~~~~t~~y~APE~~~  545 (635)
T 4fl3_A          522 DENYYKAQTHGKWPVKWYAPECIN  545 (635)
T ss_dssp             -------------CGGGSCHHHHH
T ss_pred             CccccccccCCCCceeeeChhhhc
Confidence                     112456799999864

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.97  E-value=5.8e-31  Score=221.02  Aligned_cols=166  Identities=20%  Similarity=0.311  Sum_probs=126.8

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHH-HHHHHhccCCCCcceEEEceeeeeCC
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEID-VLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~-~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|+++..  ......+..|+. +++.+.|+|+     +++++++.+.+
T Consensus        20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~ni-----v~~~~~~~~~~   94 (327)
T 3aln_A           20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYI-----VQFYGALFREG   94 (327)
T ss_dssp             CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTB-----CCEEEEEECSS
T ss_pred             CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcE-----eeeeeEEEeCC
Confidence            347899999999999999999999999999999999753  233344555555 5555666666     99999999999


Q ss_pred             EEEEEEecCCCCHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          167 HICIVFEKLGPSLYDFLRK---NSYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       167 ~~~lv~e~~~~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                      ..|+||||+.++|.+++..   .....+++..++.++.|++.||.|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus        95 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~  174 (327)
T 3aln_A           95 DCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISG  174 (327)
T ss_dssp             EEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSC
T ss_pred             ceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCce
Confidence            9999999997798888773   2234799999999999999999999998 99999999999999999999999999997


Q ss_pred             cCCC-----CcccceeeeeceeE
Q 024661          243 PRHA-----FSFQTFLSMASRVY  260 (264)
Q Consensus       243 ~~~~-----~~~~~~~y~ape~~  260 (264)
                      ....     ...++..|+|||++
T Consensus       175 ~~~~~~~~~~~~gt~~y~aPE~~  197 (327)
T 3aln_A          175 QLVDSIAKTRDAGCRPYMAPERI  197 (327)
T ss_dssp             C----------------------
T ss_pred             ecccccccccCCCCccccCceee
Confidence            6433     22578899999987

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.97  E-value=4.2e-31  Score=218.50  Aligned_cols=163  Identities=24%  Similarity=0.320  Sum_probs=140.1

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      |.....||+|+||.||+|.+..+++.||+|.+... ....+.+.+|+.+++.+.|+|+     +++++++.+.+..++||
T Consensus        24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~~~~~~lv~   98 (295)
T 2clq_A           24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNI-----VQYLGSFSENGFIKIFM   98 (295)
T ss_dssp             TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTB-----CCEEEEEEETTEEEEEE
T ss_pred             CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCE-----eeEeeEEEeCCcEEEEE
Confidence            33445899999999999999999999999998753 3445778899999999998887     99999999999999999


Q ss_pred             ecC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec-CCcEEeccCCCCCcCCC---
Q 024661          173 EKL-GPSLYDFLRKNS-YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS-AEYVKVPDYKVPSPRHA---  246 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~-~~~v~l~Dfg~a~~~~~---  246 (264)
                      |++ +++|.+++.... ...+++..++.++.||+.||.|||++||+|+||||+||+++. ++.++|+|||++.....   
T Consensus        99 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~  178 (295)
T 2clq_A           99 EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP  178 (295)
T ss_dssp             ECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred             EeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence            999 899999998653 235679999999999999999999999999999999999998 89999999999975432   


Q ss_pred             ---CcccceeeeeceeEe
Q 024661          247 ---FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~  261 (264)
                         ...++..|+|||++.
T Consensus       179 ~~~~~~~~~~y~aPE~~~  196 (295)
T 2clq_A          179 CTETFTGTLQYMAPEIID  196 (295)
T ss_dssp             --CCCCCCGGGCCHHHHH
T ss_pred             cccccCCCccccChhhhc
Confidence               335788999999864

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.97  E-value=4.2e-31  Score=220.52  Aligned_cols=167  Identities=14%  Similarity=0.180  Sum_probs=133.8

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCC---CCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeee
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNE---KKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~---~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~  163 (264)
                      ..++|.+.+.||+|+||.||+|.+..   ++..||+|+++..   ....+.+.+|+.+++.++|+|+     +++++++.
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~  106 (313)
T 3brb_A           32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV-----IRLLGVCI  106 (313)
T ss_dssp             CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTB-----CCCCEEEE
T ss_pred             CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCe-----eeeeEEEe
Confidence            34679999999999999999998765   4568999998743   3445678899999999998887     99999887


Q ss_pred             eCC-----EEEEEEecC-CCCHHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcE
Q 024661          164 YRN-----HICIVFEKL-GPSLYDFLRKN----SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV  233 (264)
Q Consensus       164 ~~~-----~~~lv~e~~-~~~L~~~l~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v  233 (264)
                      +..     ..++||||+ +++|.+++...    ....+++..++.++.||+.||.|||++||+||||||+|||++.++.+
T Consensus       107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~  186 (313)
T 3brb_A          107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTV  186 (313)
T ss_dssp             C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCE
T ss_pred             eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcE
Confidence            654     459999999 89999999632    23469999999999999999999999999999999999999999999


Q ss_pred             EeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          234 KVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       234 ~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      ||+|||++.....        ...++..|+|||++.
T Consensus       187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  222 (313)
T 3brb_A          187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLA  222 (313)
T ss_dssp             EECSCSCC----------------CCGGGSCHHHHH
T ss_pred             EEeecCcceecccccccCcccccCCCccccCchhhc
Confidence            9999999976432        223566799999764

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.97  E-value=1.2e-31  Score=220.12  Aligned_cols=163  Identities=21%  Similarity=0.303  Sum_probs=133.3

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee-CCEEE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-RNHIC  169 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~-~~~~~  169 (264)
                      .++|++.+.||+|+||.||+|.+.  ++.||+|+++.. ...+.+.+|+.+++.++|+|+     +++++++.. .+..|
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-~~~~~~~~E~~~l~~l~h~~i-----v~~~~~~~~~~~~~~   91 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNL-----VQLLGVIVEEKGGLY   91 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC-C--HHHHHTHHHHTTCCCTTB-----CCEEEEECCC--CCE
T ss_pred             hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecch-hHHHHHHHHHHHHHhCCCCCE-----eeEEEEEEcCCCceE
Confidence            367999999999999999999875  788999998753 345678899999999998887     999998654 45789


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC--
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA--  246 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~--  246 (264)
                      +||||+ +++|.+++.......+++..++.++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.....  
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~  171 (278)
T 1byg_A           92 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ  171 (278)
T ss_dssp             EEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred             EEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccccc
Confidence            999999 78999999865423489999999999999999999999999999999999999999999999999876443  


Q ss_pred             -CcccceeeeeceeEe
Q 024661          247 -FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 -~~~~~~~y~ape~~~  261 (264)
                       ...++..|+|||++.
T Consensus       172 ~~~~~~~~y~aPE~~~  187 (278)
T 1byg_A          172 DTGKLPVKWTAPEALR  187 (278)
T ss_dssp             ----CCTTTSCHHHHH
T ss_pred             cCCCccccccCHHHhC
Confidence             234667799999753

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=2.4e-31  Score=227.37  Aligned_cols=164  Identities=17%  Similarity=0.181  Sum_probs=131.7

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCC---CcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeee-eC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD-YR  165 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~-~~  165 (264)
                      ..|++.+.||+|+||.||+|.+..+   +..+|+|.++..  ....+.+.+|+.+++.++|+|+     +++++++. .+
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnI-----v~~~~~~~~~~  163 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV-----LSLLGICLRSE  163 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTB-----CCCCEEECCCS
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCc-----ceEEEEEEcCC
Confidence            3589999999999999999987543   346899988642  3455778899999999998887     99999754 46


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      +..|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus       164 ~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~  242 (373)
T 3c1x_A          164 GSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM  242 (373)
T ss_dssp             SCCEEEEECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred             CCeEEEEECCCCCCHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccc
Confidence            7889999999 889999998654 46899999999999999999999999999999999999999999999999999753


Q ss_pred             CC----------CcccceeeeeceeEe
Q 024661          245 HA----------FSFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~~----------~~~~~~~y~ape~~~  261 (264)
                      ..          ...++..|||||++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~  269 (373)
T 3c1x_A          243 YDKEFDSVHNKTGAKLPVKWMALESLQ  269 (373)
T ss_dssp             ---------------CCGGGSCHHHHH
T ss_pred             cccccccccccCCCCCcccccChHHhc
Confidence            22          123456799999764

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.97  E-value=7.4e-31  Score=218.35  Aligned_cols=161  Identities=24%  Similarity=0.336  Sum_probs=139.1

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEech-----hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      |...+.||+|+||.||+|.+  +++.+|+|++...     ....+.+.+|+.+++.++|+|+     +++++++.+.+..
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~~~~~  105 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENL-----VELLGFSSDGDDL  105 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTB-----CCEEEEECSSSSC
T ss_pred             cccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCe-----EEEEEEEecCCce
Confidence            44458999999999999986  4788999998642     2346788999999999999887     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          169 CIVFEKL-GPSLYDFLRKNS-YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      |+||||+ +++|.+++.... ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.....
T Consensus       106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~  185 (307)
T 2nru_A          106 CLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK  185 (307)
T ss_dssp             EEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeeccccccccc
Confidence            9999999 999999997432 24699999999999999999999999999999999999999999999999999865432


Q ss_pred             --------CcccceeeeeceeEe
Q 024661          247 --------FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 --------~~~~~~~y~ape~~~  261 (264)
                              ...++..|+|||++.
T Consensus       186 ~~~~~~~~~~~g~~~y~aPE~~~  208 (307)
T 2nru_A          186 FAQTVMTSRIVGTTAYMAPEALR  208 (307)
T ss_dssp             CSSCEECSSCCSCGGGCCHHHHT
T ss_pred             ccccccccccCCCcCcCChHHhc
Confidence                    235788999999753

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.97  E-value=9.7e-31  Score=217.95  Aligned_cols=161  Identities=28%  Similarity=0.368  Sum_probs=133.3

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      ++|++.+.||+|+||.||+|.+.  ++.||+|.+... ...+.+.+|+.+++.++|+|+     +++++++.+  ..|+|
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~i-----v~~~~~~~~--~~~lv   77 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE-SERKAFIVELRQLSRVNHPNI-----VKLYGACLN--PVCLV   77 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST-THHHHHHHHHHHHHHCCCTTB-----CCEEEBCTT--TTEEE
T ss_pred             hHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCc-----CeEEEEEcC--CcEEE
Confidence            57999999999999999999875  678999998643 445678899999999999887     888888764  47999


Q ss_pred             EecC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCCCCEEeecCCc-EEeccCCCCCcCC
Q 024661          172 FEKL-GPSLYDFLRKNSY-RSFPIDLVRELGRQLLESVAFMHE---LRLIHTDLKPENILLVSAEY-VKVPDYKVPSPRH  245 (264)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dikp~Nili~~~~~-v~l~Dfg~a~~~~  245 (264)
                      |||+ +++|.+++..... ..+++..++.++.|++.||.|||+   +||+||||||+|||++.++. +||+|||++....
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~  157 (307)
T 2eva_A           78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ  157 (307)
T ss_dssp             EECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----
T ss_pred             EEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccc
Confidence            9999 8999999986541 247899999999999999999999   89999999999999998886 7999999997643


Q ss_pred             C---CcccceeeeeceeEee
Q 024661          246 A---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~---~~~~~~~y~ape~~~~  262 (264)
                      .   ...+|..|+|||++.+
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~  177 (307)
T 2eva_A          158 THMTNNKGSAAWMAPEVFEG  177 (307)
T ss_dssp             -------CCTTSSCHHHHTC
T ss_pred             cccccCCCCCceEChhhhCC
Confidence            2   3357889999998643

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.97  E-value=9.8e-31  Score=215.86  Aligned_cols=164  Identities=23%  Similarity=0.310  Sum_probs=132.0

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCC-CC--cEEEEEEEech----hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeee
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNE-KK--ELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~--~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~  163 (264)
                      .++|++.+.||+|+||.||+|.+.. ++  ..||+|+++..    ....+.+.+|+.+++.++|+|+     +++++++.
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----~~~~~~~~   91 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL-----IRLYGVVL   91 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTB-----CCEEEEEC
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCc-----ccEEEEEc
Confidence            4679999999999999999998643 33  36899988643    2445778899999999998887     99999988


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                      +.. .++|||++ +++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++.
T Consensus        92 ~~~-~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~  169 (291)
T 1u46_A           92 TPP-MKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMR  169 (291)
T ss_dssp             SSS-CEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred             cCC-ceeeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccc
Confidence            765 88999999 899999998653 368999999999999999999999999999999999999999999999999987


Q ss_pred             cCCCC---------cccceeeeeceeEe
Q 024661          243 PRHAF---------SFQTFLSMASRVYI  261 (264)
Q Consensus       243 ~~~~~---------~~~~~~y~ape~~~  261 (264)
                      .....         ..++..|+|||++.
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~  197 (291)
T 1u46_A          170 ALPQNDDHYVMQEHRKVPFAWCAPESLK  197 (291)
T ss_dssp             ECCC-CCEEEC-----CCGGGCCHHHHH
T ss_pred             cccccccchhhhccCCCCceeeCchhhc
Confidence            64332         23456799999753

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.97  E-value=2.9e-30  Score=215.63  Aligned_cols=165  Identities=22%  Similarity=0.253  Sum_probs=127.4

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++....   ...+.+.++..+++.+.|+|+     +++++++.+.+.
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i-----~~~~~~~~~~~~   98 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYI-----VQCFGTFITNTD   98 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTB-----CCEEEEEECSSE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCce-----eeEEEEEecCCc
Confidence            367999999999999999999999999999999997532   222333444456666777776     999999999999


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL-RLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      .|+||||+++.+..+..... ..+++..++.++.||+.||.|||++ ||+|+||||+|||++.++.+||+|||++.....
T Consensus        99 ~~lv~e~~~~~~~~l~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~  177 (318)
T 2dyl_A           99 VFIAMELMGTCAEKLKKRMQ-GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD  177 (318)
T ss_dssp             EEEEECCCSEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred             EEEEEeccCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence            99999999777776665432 4699999999999999999999995 999999999999999999999999999965432


Q ss_pred             -----CcccceeeeeceeEe
Q 024661          247 -----FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 -----~~~~~~~y~ape~~~  261 (264)
                           ...++..|+|||++.
T Consensus       178 ~~~~~~~~~~~~y~aPE~~~  197 (318)
T 2dyl_A          178 DKAKDRSAGCAAYMAPERID  197 (318)
T ss_dssp             ---------CCTTCCHHHHC
T ss_pred             CccccccCCCccccChhhcc
Confidence                 335788899999874

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.97  E-value=2.8e-30  Score=235.21  Aligned_cols=166  Identities=22%  Similarity=0.275  Sum_probs=140.7

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCC---CcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeee
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEK---KELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~---~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~  163 (264)
                      ...++|++.+.||+|+||.||+|.+..+   +..+|+|.++..  ....+.+.+|+.+++.+.|+|+     +++++++.
T Consensus       387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnI-----v~l~~~~~  461 (656)
T 2j0j_A          387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI-----VKLIGVIT  461 (656)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEEC
T ss_pred             cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEe
Confidence            3457899999999999999999998654   457999987642  3445778899999999999888     99999885


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCC
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPS  242 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~  242 (264)
                       ++..|+||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus       462 -~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~  539 (656)
T 2j0j_A          462 -ENPVWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR  539 (656)
T ss_dssp             -SSSCEEEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred             -cCceEEEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCe
Confidence             46689999999 899999998654 468999999999999999999999999999999999999999999999999998


Q ss_pred             cCCCC-------cccceeeeeceeEe
Q 024661          243 PRHAF-------SFQTFLSMASRVYI  261 (264)
Q Consensus       243 ~~~~~-------~~~~~~y~ape~~~  261 (264)
                      .....       ..++..|||||++.
T Consensus       540 ~~~~~~~~~~~~~~~t~~y~aPE~~~  565 (656)
T 2j0j_A          540 YMEDSTYYKASKGKLPIKWMAPESIN  565 (656)
T ss_dssp             SCCC----------CCGGGCCHHHHH
T ss_pred             ecCCCcceeccCCCCCcceeCHHHhc
Confidence            65432       23456799999764

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.97  E-value=1.4e-30  Score=226.92  Aligned_cols=168  Identities=21%  Similarity=0.182  Sum_probs=133.6

Q ss_pred             CCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeC
Q 024661           87 GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        87 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .+.+.+.|.+.+.||+|+||+||.+. ..+|+.||||++....  .+.+.+|+.+++.+ .|+|+     +++++++.+.
T Consensus        10 ~~~l~~~~~~~~~LG~G~~g~V~~~~-~~~g~~vAvK~~~~~~--~~~~~~E~~~l~~l~~HpnI-----v~~~~~~~~~   81 (434)
T 2rio_A           10 EQSLKNLVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLIDF--CDIALMEIKLLTESDDHPNV-----IRYYCSETTD   81 (434)
T ss_dssp             SCSCSSCEEEEEEEEECSTTCEEEEE-ESSSSEEEEEEEEGGG--HHHHHHHHHHHHHHTTSTTB-----CCEEEEEECS
T ss_pred             hhhhhheeeccCeEeeCCCeEEEEEE-EECCeEEEEEEEcHHH--HHHHHHHHHHHHhccCCCCc-----CeEEEEEecC
Confidence            34566778889999999999998754 4578999999987533  35678899999987 68877     9999999999


Q ss_pred             CEEEEEEecCCCCHHHHHHhcCCCC-----CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC----------
Q 024661          166 NHICIVFEKLGPSLYDFLRKNSYRS-----FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA----------  230 (264)
Q Consensus       166 ~~~~lv~e~~~~~L~~~l~~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~----------  230 (264)
                      +.+|+||||++++|.+++.......     .++..++.++.||+.||+|||++||+||||||+|||++.+          
T Consensus        82 ~~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~  161 (434)
T 2rio_A           82 RFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTG  161 (434)
T ss_dssp             SEEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTC
T ss_pred             CeEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccC
Confidence            9999999999889999998654111     1233457899999999999999999999999999999764          


Q ss_pred             ---CcEEeccCCCCCcCCC----------CcccceeeeeceeEee
Q 024661          231 ---EYVKVPDYKVPSPRHA----------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       231 ---~~v~l~Dfg~a~~~~~----------~~~~~~~y~ape~~~~  262 (264)
                         +.+||+|||++.....          ...+|..|||||++.+
T Consensus       162 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  206 (434)
T 2rio_A          162 AENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEE  206 (434)
T ss_dssp             CCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSC
T ss_pred             CCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhcc
Confidence               4899999999976432          2358889999998754

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.96  E-value=3.8e-29  Score=207.48  Aligned_cols=148  Identities=24%  Similarity=0.461  Sum_probs=128.7

Q ss_pred             cCCCeEEE-eecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHH-HHHhccCCCCcceEEEceeeee---
Q 024661           90 LTPRYRIL-SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVL-QRLARHDIGGTRCVQIRNWFDY---  164 (264)
Q Consensus        90 ~~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l-~~l~~~~~~~~~~~~~~~~~~~---  164 (264)
                      +.++|.+. +.||+|+||.||+|.+..+++.||+|+++..    ....+|+.++ +...|+|+     +++++++.+   
T Consensus        15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~e~~~~~~~~~h~~i-----~~~~~~~~~~~~   85 (299)
T 3m2w_A           15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHI-----VRIVDVYENLYA   85 (299)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTB-----CCEEEEEEEEET
T ss_pred             cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc----HHHHHHHHHHHHhccCCCc-----hhHHhhhhhhcC
Confidence            34567776 7899999999999999999999999999753    3456788887 44567776     899988877   


Q ss_pred             -CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec---CCcEEeccCC
Q 024661          165 -RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS---AEYVKVPDYK  239 (264)
Q Consensus       165 -~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~---~~~v~l~Dfg  239 (264)
                       ...+|+||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.   ++.++|+|||
T Consensus        86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg  165 (299)
T 3m2w_A           86 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG  165 (299)
T ss_dssp             TEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred             CCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence             77899999999 889999999876557999999999999999999999999999999999999998   7899999999


Q ss_pred             CCCcCCC
Q 024661          240 VPSPRHA  246 (264)
Q Consensus       240 ~a~~~~~  246 (264)
                      ++.....
T Consensus       166 ~a~~~~~  172 (299)
T 3m2w_A          166 FAKETTG  172 (299)
T ss_dssp             TCEECTT
T ss_pred             ccccccc
Confidence            9976543

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.96  E-value=1.9e-30  Score=225.76  Aligned_cols=161  Identities=19%  Similarity=0.142  Sum_probs=131.5

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeCCEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      .+|.+.+.||+|+||+||. ....+++.||||++.....  ....+|+.+++.+ .|+|+     +++++++.+....|+
T Consensus        24 ~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~--~~~~~E~~~l~~l~~HpnI-----v~l~~~~~~~~~~~l   95 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECF--SFADREVQLLRESDEHPNV-----IRYFCTEKDRQFQYI   95 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTE--EECHHHHHHHHHSCCCTTB-----CCEEEEEEETTEEEE
T ss_pred             EEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHH--HHHHHHHHHHHhccCCCCc-----CeEEEEEecCCEEEE
Confidence            4699999999999999653 3345788999999864322  2356799999998 68877     999999999999999


Q ss_pred             EEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec---CC--cEEeccCCCCCcCC
Q 024661          171 VFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS---AE--YVKVPDYKVPSPRH  245 (264)
Q Consensus       171 v~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~---~~--~v~l~Dfg~a~~~~  245 (264)
                      |||+++++|.+++.... ..+.+..++.++.||+.||.|||++||+||||||+|||++.   ++  ++||+|||+|....
T Consensus        96 v~E~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~  174 (432)
T 3p23_A           96 AIELCAATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA  174 (432)
T ss_dssp             EEECCSEEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred             EEECCCCCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence            99999889999998664 34555567889999999999999999999999999999953   23  67899999987543


Q ss_pred             C---------CcccceeeeeceeEe
Q 024661          246 A---------FSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ~---------~~~~~~~y~ape~~~  261 (264)
                      .         ...+|..|||||++.
T Consensus       175 ~~~~~~~~~~~~~gt~~y~APE~l~  199 (432)
T 3p23_A          175 VGRHSFSRRSGVPGTEGWIAPEMLS  199 (432)
T ss_dssp             -----------CCSCTTSCCGGGTS
T ss_pred             CCCcceeeccccCCCcCccChhhhh
Confidence            2         235889999999875

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.96  E-value=1.6e-30  Score=234.49  Aligned_cols=168  Identities=26%  Similarity=0.353  Sum_probs=141.7

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee---
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY---  164 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~---  164 (264)
                      ..++|++.+.||+|+||.||+|.+..+|+.||+|+++..  ....+.+.+|+.+++.++|+|+     +++++++..   
T Consensus        12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnI-----V~l~~v~~~~~~   86 (676)
T 3qa8_A           12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNV-----VSAREVPDGLQK   86 (676)
T ss_dssp             -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTB-----CCEEECCTTTCC
T ss_pred             CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCC-----Cceeeeeccccc
Confidence            337899999999999999999999999999999988643  3456778899999999999988     888877655   


Q ss_pred             ---CCEEEEEEecC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCc---EEec
Q 024661          165 ---RNHICIVFEKL-GPSLYDFLRKNS-YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEY---VKVP  236 (264)
Q Consensus       165 ---~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~---v~l~  236 (264)
                         .+..|+||||+ +++|.+++.... ...+++..++.++.|++.||.|||++||+||||||+|||++.++.   ++|+
T Consensus        87 ~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~  166 (676)
T 3qa8_A           87 LAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKII  166 (676)
T ss_dssp             CCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred             ccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEc
Confidence               67889999999 999999998643 235889999999999999999999999999999999999997764   9999


Q ss_pred             cCCCCCcCCC-----CcccceeeeeceeEee
Q 024661          237 DYKVPSPRHA-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       237 Dfg~a~~~~~-----~~~~~~~y~ape~~~~  262 (264)
                      |||++.....     ...++..|+|||++.+
T Consensus       167 DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~  197 (676)
T 3qa8_A          167 DLGYAKELDQGELCTEFVGTLQYLAPELLEQ  197 (676)
T ss_dssp             SCCCCCBTTSCCCCCCCCSCCTTCSSCSSCC
T ss_pred             ccccccccccccccccccCCcccCChHHhcc
Confidence            9999976433     2357889999998753

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.96  E-value=5.8e-31  Score=220.10  Aligned_cols=165  Identities=18%  Similarity=0.268  Sum_probs=137.0

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      +...++|++.+.||+|+||.||+|.+..   .+++|+++...   ...+.+.+|+.+++.++|+|+     +++++++.+
T Consensus        29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i-----v~~~~~~~~  100 (319)
T 2y4i_B           29 DIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENV-----VLFMGACMS  100 (319)
T ss_dssp             SSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTB-----CCCCEEEEC
T ss_pred             cCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCE-----eEEEEEEec
Confidence            3445789999999999999999999864   38999886432   233456779999999988887     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      .+.+++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+|||++ ++.++|+|||++..
T Consensus       101 ~~~~~iv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~  178 (319)
T 2y4i_B          101 PPHLAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSI  178 (319)
T ss_dssp             SSCEEEECBCCCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC-
T ss_pred             CCceEEEeecccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCccc
Confidence            99999999999 899999997653 4689999999999999999999999999999999999998 68999999999764


Q ss_pred             CC-----------CCcccceeeeeceeEee
Q 024661          244 RH-----------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       244 ~~-----------~~~~~~~~y~ape~~~~  262 (264)
                      ..           ....++..|+|||++..
T Consensus       179 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~  208 (319)
T 2y4i_B          179 SGVLQAGRREDKLRIQNGWLCHLAPEIIRQ  208 (319)
T ss_dssp             ---------CCSCBCCSGGGGTSCHHHHSC
T ss_pred             cccccccccccccccCCCcccccChHHhhh
Confidence            32           12347888999998753

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.96  E-value=2.1e-29  Score=218.15  Aligned_cols=168  Identities=15%  Similarity=0.049  Sum_probs=128.7

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech----hhhHHHHHHHHHHHHHHhccC-----------CCCcceE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHD-----------IGGTRCV  156 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~-----------~~~~~~~  156 (264)
                      ..|.+.+.||+|+||.||+|.+..+|+.||||+++..    ....+.+.+|+.+++.+.|..           +....++
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  157 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  157 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence            3488999999999999999999999999999998732    223567888999988887621           1111111


Q ss_pred             EE------ceeeee-----CCEEEEEEecCCCCHHHHHHh-----cCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 024661          157 QI------RNWFDY-----RNHICIVFEKLGPSLYDFLRK-----NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDL  220 (264)
Q Consensus       157 ~~------~~~~~~-----~~~~~lv~e~~~~~L~~~l~~-----~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~di  220 (264)
                      .+      ...+..     ...++++|++++++|.+++..     .....+++..++.++.||+.||+|||++||+||||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDi  237 (413)
T 3dzo_A          158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYL  237 (413)
T ss_dssp             ECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCc
Confidence            11      111111     235789999999999999862     22235778889999999999999999999999999


Q ss_pred             CCCCEEeecCCcEEeccCCCCCcCCC---CcccceeeeeceeE
Q 024661          221 KPENILLVSAEYVKVPDYKVPSPRHA---FSFQTFLSMASRVY  260 (264)
Q Consensus       221 kp~Nili~~~~~v~l~Dfg~a~~~~~---~~~~~~~y~ape~~  260 (264)
                      ||+|||++.++.+||+|||+++....   ...+ ..|||||++
T Consensus       238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~  279 (413)
T 3dzo_A          238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETT  279 (413)
T ss_dssp             CGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHH
T ss_pred             ccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhh
Confidence            99999999999999999999876433   2346 889999987

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.95  E-value=7.9e-29  Score=220.88  Aligned_cols=149  Identities=14%  Similarity=0.074  Sum_probs=116.1

Q ss_pred             EEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---------hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           95 RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        95 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      ...+.||+|+||.||+|..  .++.+++|......         ...+.+.+|+++++.++|+|+     +.+..++.+.
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nI-----v~~~~~~~~~  411 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGI-----PAPYIFDVDL  411 (540)
T ss_dssp             ---------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTC-----CCCCEEEEET
T ss_pred             CCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCc-----CceEEEEEeC
Confidence            4467899999999999954  46778998764211         124567899999999999998     7445555567


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      +..|+||||+ +++|.+++..          +..++.|++.||+|||++||+||||||+|||++.  ++||+|||+|+..
T Consensus       412 ~~~~lVmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~  479 (540)
T 3en9_A          412 DNKRIMMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKIS  479 (540)
T ss_dssp             TTTEEEEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred             CccEEEEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEEC
Confidence            7789999999 8999999865          4679999999999999999999999999999998  9999999999876


Q ss_pred             CC-------------CcccceeeeeceeEee
Q 024661          245 HA-------------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       245 ~~-------------~~~~~~~y~ape~~~~  262 (264)
                      ..             ...+|..|||||++..
T Consensus       480 ~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~  510 (540)
T 3en9_A          480 NLDEDKAVDLIVFKKAVLSTHHEKFDEIWER  510 (540)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred             CCccccccchhhhhhhhcCCCCcCCHHHHHH
Confidence            54             2358899999998753

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.94  E-value=2.3e-27  Score=195.10  Aligned_cols=142  Identities=22%  Similarity=0.259  Sum_probs=112.0

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-------------------hhHHHHHHHHHHHHHHhccCCCC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------------------KYREAAMIEIDVLQRLARHDIGG  152 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------------------~~~~~~~~e~~~l~~l~~~~~~~  152 (264)
                      ..|.+.+.||+|+||.||+|.+ .+|+.||+|+++...                   .....+.+|+.+++.+.|  +  
T Consensus        90 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~--~--  164 (282)
T 1zar_A           90 KVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG--L--  164 (282)
T ss_dssp             SCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT--S--
T ss_pred             eEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC--C--
Confidence            3466779999999999999999 889999999986322                   135678899999999983  2  


Q ss_pred             cceEEEceeeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC
Q 024661          153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (264)
Q Consensus       153 ~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~  231 (264)
                          .+.+++.. +..|+||||+ +++|.+ +.      .  .....++.|++.||.|||++||+||||||+|||++ ++
T Consensus       165 ----~v~~~~~~-~~~~lvmE~~~g~~L~~-l~------~--~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~  229 (282)
T 1zar_A          165 ----AVPKVYAW-EGNAVLMELIDAKELYR-VR------V--ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EE  229 (282)
T ss_dssp             ----SSCCEEEE-ETTEEEEECCCCEEGGG-CC------C--SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TT
T ss_pred             ----CcCeEEec-cceEEEEEecCCCcHHH-cc------h--hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CC
Confidence                23333333 4569999999 889987 32      1  22457999999999999999999999999999999 99


Q ss_pred             cEEeccCCCCCcCCCCcccceeeeeceeE
Q 024661          232 YVKVPDYKVPSPRHAFSFQTFLSMASRVY  260 (264)
Q Consensus       232 ~v~l~Dfg~a~~~~~~~~~~~~y~ape~~  260 (264)
                      .+||+|||+|+..       ..++|||++
T Consensus       230 ~vkl~DFG~a~~~-------~~~~a~e~l  251 (282)
T 1zar_A          230 GIWIIDFPQSVEV-------GEEGWREIL  251 (282)
T ss_dssp             EEEECCCTTCEET-------TSTTHHHHH
T ss_pred             cEEEEECCCCeEC-------CCCCHHHHH
Confidence            9999999999643       335666654

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.92  E-value=3.3e-25  Score=180.06  Aligned_cols=138  Identities=19%  Similarity=0.137  Sum_probs=110.9

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcE--EEEEEEechh-------------------------hhHHHHHHHHHHHHHHh
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKEL--VAIKIVRSIN-------------------------KYREAAMIEIDVLQRLA  146 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~--vaiK~~~~~~-------------------------~~~~~~~~e~~~l~~l~  146 (264)
                      |.+.+.||+|+||.||+|.+..+|+.  ||||+++...                         .....+.+|+.+++.+.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            78999999999999999998778888  9999875321                         11236788999999999


Q ss_pred             ccCCCCcceEEEceeeeeCCEEEEEEecCC--C----CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecC
Q 024661          147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLG--P----SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH-ELRLIHTD  219 (264)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~--~----~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~ivH~d  219 (264)
                      |+++..+.++..       +..+|||||++  |    +|.++...     .++..+..++.|++.+|.||| ++||+|||
T Consensus       129 ~~~i~~p~~~~~-------~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~givHrD  196 (258)
T 1zth_A          129 EAGVSVPQPYTY-------MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAELVHAD  196 (258)
T ss_dssp             HTTCCCCCEEEE-------ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSCEECSS
T ss_pred             hCCCCCCeEEEc-------CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCCEEeCC
Confidence            987654444432       35689999994  3    67776432     234467889999999999999 99999999


Q ss_pred             CCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          220 LKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       220 ikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      |||+|||++.  .++|+|||+|....
T Consensus       197 lkp~NILl~~--~~~liDFG~a~~~~  220 (258)
T 1zth_A          197 LSEYNIMYID--KVYFIDMGQAVTLR  220 (258)
T ss_dssp             CSTTSEEESS--SEEECCCTTCEETT
T ss_pred             CCHHHEEEcC--cEEEEECcccccCC
Confidence            9999999988  99999999997643

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.84  E-value=1.3e-20  Score=159.48  Aligned_cols=134  Identities=19%  Similarity=0.179  Sum_probs=100.0

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-----------------------hhHHHHHHHHHHHHHHhccCC
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-----------------------KYREAAMIEIDVLQRLARHDI  150 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----------------------~~~~~~~~e~~~l~~l~~~~~  150 (264)
                      |.++..||.|++|.||+|.+. +|+.||||+++...                       ...-...+|...+.++.+.++
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            999999999999999999974 68999999875210                       011123457888888877765


Q ss_pred             CCcceEEEceeeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec
Q 024661          151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS  229 (264)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~  229 (264)
                      ..+..+   +.  .  ..+|||||+ |++|.++.        +......++.||+.+|.+||++|||||||||.|||++.
T Consensus       176 ~vp~p~---~~--~--~~~LVME~i~G~~L~~l~--------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~  240 (397)
T 4gyi_A          176 PVPEPI---AQ--S--RHTIVMSLVDALPMRQVS--------SVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIRE  240 (397)
T ss_dssp             SCCCEE---EE--E--TTEEEEECCSCEEGGGCC--------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEE
T ss_pred             CCCeee---ec--c--CceEEEEecCCccHhhhc--------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeC
Confidence            322221   11  1  237999999 66765432        11234668899999999999999999999999999998


Q ss_pred             CC----------cEEeccCCCCCc
Q 024661          230 AE----------YVKVPDYKVPSP  243 (264)
Q Consensus       230 ~~----------~v~l~Dfg~a~~  243 (264)
                      ++          .+.|+||+-+..
T Consensus       241 dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          241 EKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             EECSSCTTSEEEEEEECCCTTCEE
T ss_pred             CCCcccccccccceEEEEeCCccc
Confidence            87          489999997754

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.57  E-value=2.3e-14  Score=116.13  Aligned_cols=139  Identities=14%  Similarity=0.126  Sum_probs=107.8

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      +.|++...++.|+.+.||++...  +..+++|+..... .....+.+|+.+++.+.. .+   .+.++++++.+.+..|+
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~-~~---~vP~v~~~~~~~~~~~l   87 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEG-KL---PVPKVLHFERHDGWSNL   87 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTT-TS---CCCCEEEEEEETTEEEE
T ss_pred             ccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhc-CC---CCCeEEEEEecCCceEE
Confidence            45899999999999999999754  6789999886422 223468889999999965 22   34677777888889999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-------------------------------------
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-------------------------------------  212 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-------------------------------------  212 (264)
                      |||++ |.+|.+.+.       +......++.++..+|..||+                                     
T Consensus        88 v~e~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (263)
T 3tm0_A           88 LMSEADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE  160 (263)
T ss_dssp             EEECCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred             EEEecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence            99999 778876521       112234678899999999998                                     


Q ss_pred             ----------------------CCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          213 ----------------------LRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       213 ----------------------~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                                            ..++|+|+++.|||++.++.+.|+||+.+..
T Consensus       161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence                                  3489999999999998765667999998754

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.46  E-value=2.6e-13  Score=109.49  Aligned_cols=137  Identities=14%  Similarity=0.101  Sum_probs=98.5

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      ..|.+....+.|..+.||++.. .+|..+++|+....  ....+.+|+.+++.+.+.++   .+.+++.+....+..|+|
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~---~vP~~~~~~~~~~~~~~v   93 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGV---PCAAVLDVVTEAGRDWLL   93 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTC---CBCCEEEEEECSSCEEEE
T ss_pred             CCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCC---CCCeEEEeccCCCCCEEE
Confidence            3466655555667799999964 45677999987643  23457789999999987654   235566667777789999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC------------------------------------
Q 024661          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR------------------------------------  214 (264)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~------------------------------------  214 (264)
                      ||++ |.+|.  ..     ..+.   ..++.+++..|..||+..                                    
T Consensus        94 ~e~i~G~~l~--~~-----~~~~---~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (264)
T 1nd4_A           94 LGEVPGQDLL--SS-----HLAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ  163 (264)
T ss_dssp             EECCSSEETT--TS-----CCCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGT
T ss_pred             EEecCCcccC--cC-----cCCH---hHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhcc
Confidence            9999 76663  11     1222   245667777777777643                                    


Q ss_pred             ----------------------CeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          215 ----------------------LIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       215 ----------------------ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                                            ++|+|++|.|||++.++.+.|+|||.+...
T Consensus       164 ~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g  215 (264)
T 1nd4_A          164 GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA  215 (264)
T ss_dssp             TCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred             CccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence                                  999999999999987766679999998654

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.35  E-value=3.1e-12  Score=108.33  Aligned_cols=140  Identities=15%  Similarity=0.216  Sum_probs=102.3

Q ss_pred             EEeecccCccEEEEEEEeCCCCcEEEEEEEe--chh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC---CEE
Q 024661           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR---NHI  168 (264)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~--~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~---~~~  168 (264)
                      ..+.|+.|.++.||++...  +..+++|+..  ...  .....+.+|..+++.+...++   .+.+++.++.+.   +..
T Consensus        42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~v---pvP~~~~~~~~~~~~g~~  116 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDV---PVAKMYALCEDESVIGRA  116 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSS---CCCCEEEEECCTTTTSSC
T ss_pred             eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCC---CCCcEEEECCCCCccCCe
Confidence            3567899999999998764  4568888765  322  224577889999999987554   235566666555   458


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-----------------------------------
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-----------------------------------  212 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-----------------------------------  212 (264)
                      |+|||++ |..+.+.    ....++......++.+++..|..||+                                   
T Consensus       117 ~~vme~v~G~~l~~~----~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (359)
T 3dxp_A          117 FYIMEFVSGRVLWDQ----SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE  192 (359)
T ss_dssp             EEEEECCCCBCCCCT----TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred             EEEEEecCCeecCCC----ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence            9999999 6555331    11246788888999999999999997                                   


Q ss_pred             -----------------------CCCeecCCCCCCEEeecCCc--EEeccCCCCCcC
Q 024661          213 -----------------------LRLIHTDLKPENILLVSAEY--VKVPDYKVPSPR  244 (264)
Q Consensus       213 -----------------------~~ivH~dikp~Nili~~~~~--v~l~Dfg~a~~~  244 (264)
                                             .+++|+|+++.|||++.++.  +.|+||+.+...
T Consensus       193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g  249 (359)
T 3dxp_A          193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG  249 (359)
T ss_dssp             CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred             CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence                                   35899999999999997753  689999998753

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=99.08  E-value=4.1e-10  Score=93.01  Aligned_cols=135  Identities=17%  Similarity=0.182  Sum_probs=96.0

Q ss_pred             eecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhc-cCCCCcceEEEceeeeeCC---EEEEEEe
Q 024661           98 SKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR-HDIGGTRCVQIRNWFDYRN---HICIVFE  173 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~-~~~~~~~~~~~~~~~~~~~---~~~lv~e  173 (264)
                      +.++.|....||++.     ..+++|+... ......+.+|..+++.+.. ..+..+.   ++......+   ..|+||+
T Consensus        26 ~~~~~G~~n~v~~v~-----~~~vlR~~~~-~~~~~~~~~E~~~l~~l~~~~~v~vP~---~~~~~~~~~~~~~~~~vm~   96 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN-----RDFIFKFPKH-SRGSTNLFNEVNILKRIHNKLPLPIPE---VVFTGMPSETYQMSFAGFT   96 (304)
T ss_dssp             CEEEECSSEEEEEST-----TSEEEEEESS-HHHHHHHHHHHHHHHHHTTSSSSCCCC---EEEECCCCSSCSCSCEEEE
T ss_pred             EecCCCCcceEEEEC-----CEEEEEecCC-cchHHHHHHHHHHHHHHHhcCCCCCCc---eEeecCCCCCCCcceEEEc
Confidence            458889999999863     4588897653 3445678899999999854 3443333   333322222   4589999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q 024661          174 KL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE----------------------------------------  212 (264)
Q Consensus       174 ~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~----------------------------------------  212 (264)
                      ++ |.+|.+....    .++......++.|++..|..||+                                        
T Consensus        97 ~i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (304)
T 3sg8_A           97 KIKGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK  172 (304)
T ss_dssp             CCCCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred             ccCCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence            99 7666643332    46777778888888888888885                                        


Q ss_pred             ------------------CCCeecCCCCCCEEeec--CCcEEeccCCCCCcCC
Q 024661          213 ------------------LRLIHTDLKPENILLVS--AEYVKVPDYKVPSPRH  245 (264)
Q Consensus       213 ------------------~~ivH~dikp~Nili~~--~~~v~l~Dfg~a~~~~  245 (264)
                                        ..++|+|+++.||+++.  ++.+.|+||+.+....
T Consensus       173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~  225 (304)
T 3sg8_A          173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISD  225 (304)
T ss_dssp             HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEEC
T ss_pred             HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCC
Confidence                              13699999999999998  4567899999886543

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.99  E-value=9.5e-09  Score=84.95  Aligned_cols=136  Identities=19%  Similarity=0.184  Sum_probs=89.5

Q ss_pred             EeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhcc-CCCCcceEEEceeee-eCCEEEEEEec
Q 024661           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH-DIGGTRCVQIRNWFD-YRNHICIVFEK  174 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~-~~~~~~~~~~~~~~~-~~~~~~lv~e~  174 (264)
                      .+.++.|....||+.     +..+++|+-. .......+.+|.++++.+.+. .+   .+..++.+.. ..+..|+|||+
T Consensus        24 v~~l~~G~~n~v~~v-----g~~~VlR~~~-~~~~~~~~~~E~~~L~~L~~~~~v---~VP~~~~~~~~~~g~~~~v~e~   94 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----NGDWVFRFPK-SQQGADELNKEIQLLPLLVGCVKV---NIPQYVYIGKRSDGNPFVGYRK   94 (306)
T ss_dssp             EEEEEECSSEEEEEE-----TTTEEEEEES-SHHHHHHHHHHHHHHHHHTTTCSS---BCCCEEEEEECTTSCEEEEEEC
T ss_pred             eeecCCCcceeEEEE-----CCEEEEEecC-CchHHHHHHHHHHHHHHHHhcCCC---CCCCeEeecccCCCceEEEEec
Confidence            345788888899987     4568888753 234456788999999999874 22   2234444432 35667899999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC----------------------------------------
Q 024661          175 L-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL----------------------------------------  213 (264)
Q Consensus       175 ~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~----------------------------------------  213 (264)
                      + |.+|.+....    .++......++.++...|..||+.                                        
T Consensus        95 i~G~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~  170 (306)
T 3tdw_A           95 VQGQILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRD  170 (306)
T ss_dssp             CCSEECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHH
T ss_pred             cCCeECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHH
Confidence            9 6666553211    233444444444444444444432                                        


Q ss_pred             --------------------CCeecCCCCCCEEeec---CCcE-EeccCCCCCcCC
Q 024661          214 --------------------RLIHTDLKPENILLVS---AEYV-KVPDYKVPSPRH  245 (264)
Q Consensus       214 --------------------~ivH~dikp~Nili~~---~~~v-~l~Dfg~a~~~~  245 (264)
                                          .++|+|+++.|||++.   ++.+ .|+||+.+....
T Consensus       171 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~gd  226 (306)
T 3tdw_A          171 YLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISD  226 (306)
T ss_dssp             HHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEEC
T ss_pred             HHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCCC
Confidence                                3599999999999997   4554 899999886544

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.94  E-value=3.4e-08  Score=79.93  Aligned_cols=128  Identities=12%  Similarity=0.156  Sum_probs=91.5

Q ss_pred             EEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC-CCCHHHHHH
Q 024661          106 GQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLR  184 (264)
Q Consensus       106 g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~  184 (264)
                      ..||+......+..+.+|+-...  ....+.+|...++.+.. .++   +.+++.+..+.+..|+|||++ |.++.+...
T Consensus        39 ~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~-~vP---VP~v~~~~~~~~~~~lvme~l~G~~~~~~~~  112 (272)
T 4gkh_A           39 ATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTA-FMP---LPTIKHFIRTPDDAWLLTTAIPGKTAFQVLE  112 (272)
T ss_dssp             CEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTT-TSC---CCCEEEEEEETTEEEEEEECCCSEEHHHHHH
T ss_pred             CeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhcc-CCC---cCeEEEEEEECCeEEEEEEeeCCcccccccc
Confidence            46899887777788999986533  34567889999999864 342   466777788889999999999 767776544


Q ss_pred             hcCCCCCCHHHHHHHHHHHHHHHHHHHH---------------------------------------------------C
Q 024661          185 KNSYRSFPIDLVRELGRQLLESVAFMHE---------------------------------------------------L  213 (264)
Q Consensus       185 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~---------------------------------------------------~  213 (264)
                      ...      .....+..++...|..||.                                                   .
T Consensus       113 ~~~------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  186 (272)
T 4gkh_A          113 EYP------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKL  186 (272)
T ss_dssp             HCG------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTT
T ss_pred             CCH------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhc
Confidence            321      1122344555555555553                                                   1


Q ss_pred             -------CCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          214 -------RLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       214 -------~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                             .++|+|+++.|||++.++.+-|+||+.+....
T Consensus       187 ~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~gd  225 (272)
T 4gkh_A          187 LPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIAD  225 (272)
T ss_dssp             CCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEEE
T ss_pred             ccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccCC
Confidence                   27899999999999987777899999986533

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.71  E-value=3.8e-07  Score=76.11  Aligned_cols=143  Identities=15%  Similarity=0.116  Sum_probs=82.4

Q ss_pred             EeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEc-e--eeeeCCEEEEEEe
Q 024661           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR-N--WFDYRNHICIVFE  173 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~-~--~~~~~~~~~lv~e  173 (264)
                      .+.|+.|..+.||++...  +..+++|+.....   ..+..|..+++.+...++..+.++... +  +....+..+++|+
T Consensus        37 ~~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~  111 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTD--SGAVCLKRIHRPE---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD  111 (346)
T ss_dssp             EEECC----CEEEEEEET--TEEEEEEEECSCH---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred             eeeccccccCcEEEEEeC--CCCEEEEecCCCH---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence            345666778899998753  3358899887532   344567788888876554323333211 1  1234678899999


Q ss_pred             cC-CCCHH-----------HHH---H-hcCCC--C---------CCHHH-------------------------------
Q 024661          174 KL-GPSLY-----------DFL---R-KNSYR--S---------FPIDL-------------------------------  195 (264)
Q Consensus       174 ~~-~~~L~-----------~~l---~-~~~~~--~---------~~~~~-------------------------------  195 (264)
                      ++ |..+.           ..+   + .....  .         ..+..                               
T Consensus       112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  191 (346)
T 2q83_A          112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE  191 (346)
T ss_dssp             CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred             eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence            99 54321           111   1 11100  0         01110                               


Q ss_pred             HHHHHHHHHHHHHHHHH-------------CCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          196 VRELGRQLLESVAFMHE-------------LRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       196 ~~~i~~qi~~~l~~lH~-------------~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      +..+..++..++.+|++             .+++|+|+++.|||++.++.+.|+||+.+...
T Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~g  253 (346)
T 2q83_A          192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFD  253 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEEC
T ss_pred             HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcccC
Confidence            11122233445666652             57999999999999988889999999988543

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.68  E-value=1.3e-07  Score=80.96  Aligned_cols=76  Identities=21%  Similarity=0.225  Sum_probs=48.0

Q ss_pred             EeecccCccEEEEEEEeCCCCcEEEEEEEechh--------hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--------KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      .+.||.|..+.||++....+++.+++|......        ...+....|.++++.+.....  ..+..++.+  +.+..
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~--~~vP~~~~~--d~~~~  110 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVP--HLVPRVFYS--DTEMA  110 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCG--GGSCCEEEE--ETTTT
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCC--CCcCeEEEE--cCCcc
Confidence            567999999999999876667889999764221        123456779999998865310  112334332  34456


Q ss_pred             EEEEecCC
Q 024661          169 CIVFEKLG  176 (264)
Q Consensus       169 ~lv~e~~~  176 (264)
                      ++|||++.
T Consensus       111 ~lvmE~l~  118 (397)
T 2olc_A          111 VTVMEDLS  118 (397)
T ss_dssp             EEEECCCT
T ss_pred             EEEEEeCC
Confidence            89999993

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.52  E-value=1.3e-07  Score=79.71  Aligned_cols=81  Identities=7%  Similarity=0.071  Sum_probs=52.7

Q ss_pred             EEEeec-ccCccEEEEEEEeC---C---CCcEEEEEEEechh---h-hHHHHHHHHHHHHHHhcc-CCCCcceEEEceee
Q 024661           95 RILSKM-GEGTFGQVVECFDN---E---KKELVAIKIVRSIN---K-YREAAMIEIDVLQRLARH-DIGGTRCVQIRNWF  162 (264)
Q Consensus        95 ~~~~~l-g~G~~g~V~~~~~~---~---~~~~vaiK~~~~~~---~-~~~~~~~e~~~l~~l~~~-~~~~~~~~~~~~~~  162 (264)
                      ...+.| +.|....+|+....   .   ++..+++|+.....   . ....+.+|..+++.+... .+.-   .+++.+.
T Consensus        23 ~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpv---P~v~~~~   99 (357)
T 3ats_A           23 TVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPV---PRVRWIE   99 (357)
T ss_dssp             EEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCC---CCEEEEE
T ss_pred             EEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCC---CcEEEEc
Confidence            335677 88888999988653   0   15678888765432   1 124677899999999875 4432   4445444


Q ss_pred             eeC---CEEEEEEecC-CCC
Q 024661          163 DYR---NHICIVFEKL-GPS  178 (264)
Q Consensus       163 ~~~---~~~~lv~e~~-~~~  178 (264)
                      .+.   +..|+|||++ |..
T Consensus       100 ~~~~~~g~~~~v~e~l~G~~  119 (357)
T 3ats_A          100 TTGDVLGTPFFLMDYVEGVV  119 (357)
T ss_dssp             CSSTTTSSCEEEEECCCCBC
T ss_pred             cCCCccCCceEEEEecCCCC
Confidence            443   3568999999 544

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=98.32  E-value=2.4e-06  Score=70.21  Aligned_cols=69  Identities=10%  Similarity=-0.030  Sum_probs=44.8

Q ss_pred             EeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC-
Q 024661           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-  175 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-  175 (264)
                      .+.|+.|....+|++      ..+++|+............+|..+++.+...++. +.+   +..  +.+.-++++||+ 
T Consensus        23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~-P~~---~~~--~~~~~~~v~e~i~   90 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVS-PEV---LHV--DPATGVMVTRYIA   90 (301)
T ss_dssp             CEEEESCSSEEEEEE------TTEEEEEECC----CCCHHHHHHHHHHHHHTTSS-CCE---EEE--CTTTCCEEEECCT
T ss_pred             eeEcCCcccccccee------eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCC-Cce---EEE--ECCCCEEEEeecC
Confidence            567888888999998      4488887764322212235689999999887764 333   222  233347899999 


Q ss_pred             CC
Q 024661          176 GP  177 (264)
Q Consensus       176 ~~  177 (264)
                      +|
T Consensus        91 ~g   92 (301)
T 3dxq_A           91 GA   92 (301)
T ss_dssp             TC
T ss_pred             CC
Confidence            65

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=98.31  E-value=1.2e-05  Score=66.40  Aligned_cols=76  Identities=21%  Similarity=0.221  Sum_probs=56.7

Q ss_pred             EeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC-
Q 024661           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-  175 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-  175 (264)
                      .+.|+.|....+|+...  .+..+++|+....  ....+..|...++.+....-  ..+.+++.+....+..|+|||++ 
T Consensus        41 ~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~--v~VP~vl~~~~~~g~~~lvme~l~  114 (312)
T 3jr1_A           41 KEKLYSGEMNEIWLIND--EVQTVFVKINERS--YRSMFRAEADQLALLAKTNS--INVPLVYGIGNSQGHSFLLLEALN  114 (312)
T ss_dssp             EEEECCSSSSEEEEEES--SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTS--SBCCCEEEEEECSSEEEEEEECCC
T ss_pred             eEEeCCccceeeeEEEE--CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCC--CCcceEEEEeecCCceEEEEEecc
Confidence            56789999999999875  3667888987643  35678889999999976521  23456666666678899999999 


Q ss_pred             CCC
Q 024661          176 GPS  178 (264)
Q Consensus       176 ~~~  178 (264)
                      +..
T Consensus       115 G~~  117 (312)
T 3jr1_A          115 KSK  117 (312)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            543

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=98.20  E-value=2e-05  Score=65.18  Aligned_cols=145  Identities=12%  Similarity=0.178  Sum_probs=82.1

Q ss_pred             EEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEc-e--eeeeCCEEEEEE
Q 024661           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIR-N--WFDYRNHICIVF  172 (264)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~-~--~~~~~~~~~lv~  172 (264)
                      -.+.|+.|....+|++... .| .+++|+.... ...+.+..|+.+++.+...++.-+.++... +  +....+..+++|
T Consensus        26 ~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~  102 (322)
T 2ppq_A           26 SYKGIAEGVENSNFLLHTT-KD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALI  102 (322)
T ss_dssp             EEEEECC---EEEEEEEES-SC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEE
T ss_pred             EeeccCCCcccceEEEEeC-Cc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEE
Confidence            3566788888899998753 23 5889987652 223456678999999987765433333221 1  122346789999


Q ss_pred             ecC-CCCH-----H------HH---HHhc-C---CCC---CC---HHHHHH------------HHHHHHHHHHHHHH---
Q 024661          173 EKL-GPSL-----Y------DF---LRKN-S---YRS---FP---IDLVRE------------LGRQLLESVAFMHE---  212 (264)
Q Consensus       173 e~~-~~~L-----~------~~---l~~~-~---~~~---~~---~~~~~~------------i~~qi~~~l~~lH~---  212 (264)
                      +++ |..+     .      ..   ++.. .   ...   ..   +...+.            +...+...++.+..   
T Consensus       103 ~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~  182 (322)
T 2ppq_A          103 SFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWP  182 (322)
T ss_dssp             ECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCC
T ss_pred             EeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCc
Confidence            999 5332     1      11   1111 0   000   11   111000            00113444555553   


Q ss_pred             ----CCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          213 ----LRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       213 ----~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                          .+++|+|+++.|||++.++.+.|+||+.+..
T Consensus       183 ~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          183 KDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             CSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             ccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence                3699999999999999776668999998754

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=98.14  E-value=8e-06  Score=70.33  Aligned_cols=33  Identities=21%  Similarity=0.260  Sum_probs=28.7

Q ss_pred             HCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          212 ELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       212 ~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      ...++|+|+++.|||++.++ ++|+||+.+....
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~  263 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGP  263 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEEC
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCc
Confidence            45799999999999998777 9999999987654

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=98.03  E-value=5.4e-05  Score=62.65  Aligned_cols=77  Identities=14%  Similarity=0.177  Sum_probs=48.8

Q ss_pred             ecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEce--eeeeCCEEEEEEecCC
Q 024661           99 KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRN--WFDYRNHICIVFEKLG  176 (264)
Q Consensus        99 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~--~~~~~~~~~lv~e~~~  176 (264)
                      .++ |....||++.. .+|+.+++|+..........+..|..+++.+....+.-+.++...+  .....+..+++|+++.
T Consensus        33 ~l~-g~~n~~y~v~~-~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~  110 (328)
T 1zyl_A           33 PLN-SYENRVYQFQD-EDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG  110 (328)
T ss_dssp             EEC-CSSSEEEEECC-TTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred             eec-CcccceEEEEc-CCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence            455 66678998754 3456799998864333445677799999999876653222222111  1233567789999994


Q ss_pred             C
Q 024661          177 P  177 (264)
Q Consensus       177 ~  177 (264)
                      |
T Consensus       111 G  111 (328)
T 1zyl_A          111 G  111 (328)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.94  E-value=3.3e-05  Score=64.23  Aligned_cols=140  Identities=13%  Similarity=0.169  Sum_probs=72.6

Q ss_pred             eecccCccEE-EEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC-
Q 024661           98 SKMGEGTFGQ-VVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-  175 (264)
Q Consensus        98 ~~lg~G~~g~-V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-  175 (264)
                      +.|+.|.... +|+... .++..+++|......  ...+..|+.+++.+...++.-+   +++.+....+  +++||++ 
T Consensus        24 ~~l~gg~s~~~~~r~~~-~~~~~~vlk~~~~~~--~~~~~~e~~~l~~L~~~g~~vP---~v~~~d~~~g--~ll~e~l~   95 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRS-PTGAKAVLMDWSPEE--GGDTQPFVDLAQYLRNLDISAP---EIYAEEHARG--LLLIEDLG   95 (333)
T ss_dssp             CC--------CCEEEEC-TTCCEEEEEECCTTT--TCCSHHHHHHHHHHHHTTCBCC---CEEEEETTTT--EEEECCCC
T ss_pred             eECCCCCCCceEEEEEc-CCCCeEEEEECCCCC--CccccHHHHHHHHHHhCCCCCC---ceeeecCCCC--EEEEeeCC
Confidence            3455444333 566653 225567777543321  1344568888888887665333   3333322233  7899999 


Q ss_pred             CCCHHHHHHhcC------------------------CCCCCHHHHH-------H-HH------------HHHHHHHHHHH
Q 024661          176 GPSLYDFLRKNS------------------------YRSFPIDLVR-------E-LG------------RQLLESVAFMH  211 (264)
Q Consensus       176 ~~~L~~~l~~~~------------------------~~~~~~~~~~-------~-i~------------~qi~~~l~~lH  211 (264)
                      +..+.+.+....                        ...++.....       . +.            ..+...++.+-
T Consensus        96 ~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~  175 (333)
T 3csv_A           96 DALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQIL  175 (333)
T ss_dssp             SCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred             CcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence            556654433110                        0112221110       0 00            11122223331


Q ss_pred             ------HCCCeecCCCCCCEEeecC----CcEEeccCCCCCcCC
Q 024661          212 ------ELRLIHTDLKPENILLVSA----EYVKVPDYKVPSPRH  245 (264)
Q Consensus       212 ------~~~ivH~dikp~Nili~~~----~~v~l~Dfg~a~~~~  245 (264)
                            ...++|+|+.+.|||++.+    +.+.|+||+.+....
T Consensus       176 ~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~  219 (333)
T 3csv_A          176 SAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH  219 (333)
T ss_dssp             HHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred             HhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence                  2369999999999999875    689999999886543

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=97.90  E-value=5.1e-05  Score=64.31  Aligned_cols=138  Identities=15%  Similarity=0.203  Sum_probs=82.2

Q ss_pred             eecccCccEEEEEEEeCC-------CCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           98 SKMGEGTFGQVVECFDNE-------KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      +.|..|-...+|++....       .++.+++|+.-..........+|..+++.+...++.    .++++.+.+    .+
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~----P~ll~~~~~----g~  127 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLG----PQLYGVFPE----GR  127 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSS----CCEEEEETT----EE
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCC----CeEEEEcCC----cc
Confidence            457667778899988642       356799998643222345667899999999988773    333444443    28


Q ss_pred             EEecC-CCCHH--------------HHHH---hcC---CCCCC--HHHHHHHHHHHHH-------------------HHH
Q 024661          171 VFEKL-GPSLY--------------DFLR---KNS---YRSFP--IDLVRELGRQLLE-------------------SVA  208 (264)
Q Consensus       171 v~e~~-~~~L~--------------~~l~---~~~---~~~~~--~~~~~~i~~qi~~-------------------~l~  208 (264)
                      ||||+ |..|.              +.|.   ...   .....  +..+..+..++..                   .+.
T Consensus       128 v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~  207 (379)
T 3feg_A          128 LEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMG  207 (379)
T ss_dssp             EEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHH
T ss_pred             EEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHH
Confidence            99999 53321              1111   111   01122  3455555554422                   233


Q ss_pred             HHHH----C----CCeecCCCCCCEEeecC----CcEEeccCCCCCc
Q 024661          209 FMHE----L----RLIHTDLKPENILLVSA----EYVKVPDYKVPSP  243 (264)
Q Consensus       209 ~lH~----~----~ivH~dikp~Nili~~~----~~v~l~Dfg~a~~  243 (264)
                      .|.+    .    .++|+|+.+.|||++.+    +.+.|+||..|..
T Consensus       208 ~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          208 NLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence            3322    2    48999999999999987    7899999999865

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.90  E-value=3.1e-05  Score=63.04  Aligned_cols=77  Identities=12%  Similarity=0.031  Sum_probs=52.8

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-hhHHHHHHHHHHHHHHhcc-CCCCcceEEEceeeeeCCEE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARH-DIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~-~~~~~~~~~~~~~~~~~~~~  168 (264)
                      .....-.+.+|.|..+.||+.+. .+|+.+.+|+..... .....+..|...|+.+... .+..+   +++..  +  .-
T Consensus        14 G~~v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP---~v~~~--~--~~   85 (288)
T 3f7w_A           14 GREVAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVP---QVAGW--D--DR   85 (288)
T ss_dssp             CCCEEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSC---CEEEE--E--TT
T ss_pred             CCCeEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcc---eEEec--c--Cc
Confidence            34566678899999999999985 567889999765322 2234677899999999654 33333   33322  2  23


Q ss_pred             EEEEecC
Q 024661          169 CIVFEKL  175 (264)
Q Consensus       169 ~lv~e~~  175 (264)
                      ++|||++
T Consensus        86 ~lv~e~l   92 (288)
T 3f7w_A           86 TLAMEWV   92 (288)
T ss_dssp             EEEEECC
T ss_pred             eEEEEee
Confidence            7899998

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=97.72  E-value=0.0003  Score=58.63  Aligned_cols=72  Identities=14%  Similarity=0.137  Sum_probs=44.7

Q ss_pred             ccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCC-CcceEEEc-e--eeeeCCEEEEEEecC-
Q 024661          101 GEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG-GTRCVQIR-N--WFDYRNHICIVFEKL-  175 (264)
Q Consensus       101 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~-~~~~~~~~-~--~~~~~~~~~lv~e~~-  175 (264)
                      |.|....||++... +| .+++|+.....     ...|+.+++.+....+. -+..+... +  +....+..+++|+++ 
T Consensus        32 G~g~~N~vy~v~~~-~g-~~vLK~~~~~~-----~~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~  104 (339)
T 3i1a_A           32 GADTNAFAYQADSE-SK-SYFIKLKYGYH-----DEINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH  104 (339)
T ss_dssp             TSCSSCEEEEEECS-SC-EEEEEEEECSS-----CCHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred             cCccccceEEEEeC-CC-CEEEEEecCcc-----chHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence            44446789998743 34 79999876533     14678888888776653 22222211 1  123457889999999 


Q ss_pred             CCCH
Q 024661          176 GPSL  179 (264)
Q Consensus       176 ~~~L  179 (264)
                      |..+
T Consensus       105 G~~~  108 (339)
T 3i1a_A          105 APNG  108 (339)
T ss_dssp             CCBT
T ss_pred             CCcC
Confidence            5444

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=97.69  E-value=0.0011  Score=57.14  Aligned_cols=70  Identities=14%  Similarity=0.192  Sum_probs=47.6

Q ss_pred             EeecccCccEEEEEEEeCC-------CCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           97 LSKMGEGTFGQVVECFDNE-------KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      .+.|+.|....+|++....       .+..+++|+.... .....+.+|..+++.+...++.    .++++.+.+    .
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~----P~l~~~~~~----g  148 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLG----PKLYGIFSG----G  148 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSS----SCEEEEETT----E
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCC----CcEEEEeCC----C
Confidence            5578888889999998643       2567999987431 1114556799999999887763    233444332    3


Q ss_pred             EEEecC
Q 024661          170 IVFEKL  175 (264)
Q Consensus       170 lv~e~~  175 (264)
                      +|+||+
T Consensus       149 ~v~e~l  154 (429)
T 1nw1_A          149 RLEEYI  154 (429)
T ss_dssp             EEECCC
T ss_pred             EEEEEe
Confidence            899999

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=97.62  E-value=0.00012  Score=61.71  Aligned_cols=71  Identities=20%  Similarity=0.171  Sum_probs=42.3

Q ss_pred             EeecccCccEEEEEEEeCC--------CCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           97 LSKMGEGTFGQVVECFDNE--------KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~--------~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      .+.|+.|....+|++....        .+..+++|+.............|..+++.+...++ .+   +++..+  .+  
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~-~P---~~~~~~--~~--  109 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKI-AP---QLLNTF--NG--  109 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTS-SC---CEEEEE--TT--
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCC-CC---ceEEec--CC--
Confidence            4567778888899987643        13678889765432222224678999999987765 22   333332  22  


Q ss_pred             EEEEecC
Q 024661          169 CIVFEKL  175 (264)
Q Consensus       169 ~lv~e~~  175 (264)
                      ++||||+
T Consensus       110 ~~v~e~i  116 (369)
T 3c5i_A          110 GRIEEWL  116 (369)
T ss_dssp             EEEEECC
T ss_pred             cEEEEEe
Confidence            6899999

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=97.60  E-value=0.00054  Score=59.55  Aligned_cols=71  Identities=15%  Similarity=0.113  Sum_probs=45.0

Q ss_pred             EeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC
Q 024661           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL  175 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  175 (264)
                      .+.|+.|-...+|++.....+..+++|+........-...+|..+++.+...++.    .++++.+.  +  .+||||+
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~----P~ll~~~~--~--G~v~e~I  183 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIA----KKIYVFFT--N--GRIEEFM  183 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSB----CCEEEEET--T--EEEEECC
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCC----CCEEEEeC--C--eEEEEee
Confidence            4578888889999998765457789998753221111125799999999877653    33444442  2  2599999

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=96.75  E-value=0.015  Score=49.96  Aligned_cols=74  Identities=16%  Similarity=0.126  Sum_probs=46.5

Q ss_pred             EeecccCccEEEEEEEeCCC-------CcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           97 LSKMGEGTFGQVVECFDNEK-------KELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      .+.+..|-...+|++.....       ++.+++|+........-...+|..+++.+...++.    .++++.+.  +  +
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~----P~l~~~~~--~--~  146 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIA----PNIIADFP--E--G  146 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSS----CCEEEEET--T--E
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCC----CCEEEEcC--C--C
Confidence            45676777788999886521       57789998643222222235799999999877763    23333222  2  7


Q ss_pred             EEEecC-CCC
Q 024661          170 IVFEKL-GPS  178 (264)
Q Consensus       170 lv~e~~-~~~  178 (264)
                      +||||+ |..
T Consensus       147 ~I~efI~G~~  156 (424)
T 3mes_A          147 RIEEFIDGEP  156 (424)
T ss_dssp             EEEECCCSEE
T ss_pred             EEEEEeCCcc
Confidence            899999 543

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=96.34  E-value=0.023  Score=48.38  Aligned_cols=29  Identities=28%  Similarity=0.424  Sum_probs=25.2

Q ss_pred             CeecCCCCCCEEee------cCCcEEeccCCCCCc
Q 024661          215 LIHTDLKPENILLV------SAEYVKVPDYKVPSP  243 (264)
Q Consensus       215 ivH~dikp~Nili~------~~~~v~l~Dfg~a~~  243 (264)
                      ++|+|+.+.|||+.      .++.+.++||..|..
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            67999999999994      456899999999875

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=87.52  E-value=2  Score=33.08  Aligned_cols=60  Identities=15%  Similarity=0.034  Sum_probs=46.5

Q ss_pred             CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEeecCCcEEecc
Q 024661          177 PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPD  237 (264)
Q Consensus       177 ~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~Nili~~~~~v~l~D  237 (264)
                      -+|.++|...+ .+++|+++|.++.|.+.+|.-+-. ..-..+=+.|..|++..+|+|.+.+
T Consensus        33 vSL~eIL~~~~-~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~   93 (229)
T 2yle_A           33 LSLEEILRLYN-QPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP   93 (229)
T ss_dssp             EEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC
T ss_pred             ccHHHHHHHcC-CCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc
Confidence            37999999775 689999999999999999887632 2212333456899999999998774

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=85.86  E-value=3  Score=32.03  Aligned_cols=77  Identities=13%  Similarity=0.022  Sum_probs=55.9

Q ss_pred             eeCCEEEEEEecC-CC-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH-HHHHCCCeecCCCCCCEEeecCCcEEeccCC
Q 024661          163 DYRNHICIVFEKL-GP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVA-FMHELRLIHTDLKPENILLVSAEYVKVPDYK  239 (264)
Q Consensus       163 ~~~~~~~lv~e~~-~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~-~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg  239 (264)
                      .+++.+.+.++.- ++ ++.. ++     .++....++++.+|+.... ++  ..-+|--|+|+||+++.++.+++...|
T Consensus        58 ~~eD~~~i~y~~~~~~~~f~~-i~-----~~~~~eKlrll~nl~~L~~~~~--~~r~tf~l~P~NL~f~~~~~p~i~hRG  129 (219)
T 4ano_A           58 VSEDEVKVVIKPPSSFLTFAA-IR-----KTTLLSRIRAAIHLVSKVKHHS--ARRLIFIVCPENLMFNRALEPFFLHVG  129 (219)
T ss_dssp             ECSSEEEEEEECCTTCEEHHH-HH-----TSCHHHHHHHHHHHHHHHSSCC--SSSEECCCCGGGEEECTTCCEEESCCE
T ss_pred             EeCCEEEEEEEcCcccCcHHH-HH-----hcCHHHHHHHHHHHHHHHHHhh--hCceeEEEeCceEEEeCCCcEEEEEcC
Confidence            5667777777776 33 4443 33     4777888888888776555 33  456777899999999999999999999


Q ss_pred             CCCcCCCC
Q 024661          240 VPSPRHAF  247 (264)
Q Consensus       240 ~a~~~~~~  247 (264)
                      +-....+.
T Consensus       130 i~~~lpP~  137 (219)
T 4ano_A          130 VKESLPPD  137 (219)
T ss_dssp             ETTTBSSC
T ss_pred             CcccCCCC
Confidence            86554443

>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3

Probab=81.87  E-value=19  Score=29.49  Aligned_cols=77  Identities=16%  Similarity=0.124  Sum_probs=43.7

Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHH--HHHHHHHHHCC-----CeecCCCCCCEEeecCC-cEEecc
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQL--LESVAFMHELR-----LIHTDLKPENILLVSAE-YVKVPD  237 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi--~~~l~~lH~~~-----ivH~dikp~Nili~~~~-~v~l~D  237 (264)
                      ..+++|+|. |..|.+.-...-...+.++.    ..++  +-+++.+..++     +.+.--.++|||++.++ .+.++|
T Consensus       156 ~~~l~meyv~G~~L~e~~~~~~~~~f~~~~----~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~ID  231 (342)
T 1cja_A          156 ANILLMELVRGITLNKLTTTSAPEVLTKST----MQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPID  231 (342)
T ss_dssp             SEEEEEECCCEEESTTCCSSSHHHHSCHHH----HHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECS
T ss_pred             cceehhhhcCCCccccchhhhhhhhcCHHH----HHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEc
Confidence            567999999 55544321100000133333    2332  33566666552     22233578999999765 489999


Q ss_pred             CCCCCcCCCC
Q 024661          238 YKVPSPRHAF  247 (264)
Q Consensus       238 fg~a~~~~~~  247 (264)
                      -+++...+..
T Consensus       232 hn~af~~~s~  241 (342)
T 1cja_A          232 SKIIPLDASH  241 (342)
T ss_dssp             CCCCCCCSSC
T ss_pred             CCccccCCcH
Confidence            9999775543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	264
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	5e-31
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	8e-31
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-28
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-28
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	4e-28
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	9e-28
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-27
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	5e-27
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-26
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-26
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-26
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	6e-26
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-25
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	6e-25
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-24
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-24
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	3e-24
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-23
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-23
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-23
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-23
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-22
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-22
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-22
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-22
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-22
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	4e-22
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	4e-22
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	6e-22
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	8e-22
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-21
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	3e-21
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	3e-21
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-21
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	5e-21
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	7e-21
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-20
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-20
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-20
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-20
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-20
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-20
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	4e-20
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	5e-20
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	6e-20
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-19
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-19
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	4e-19
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	4e-19
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	4e-18
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	5e-18
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	5e-18
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	7e-18
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	8e-18
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	9e-18
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-17
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-16
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-16
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-16
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-15
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	3e-15
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	8e-15
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	7e-12

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (286), Expect = 5e-31
 Identities = 39/151 (25%), Positives = 77/151 (50%), Gaps = 6/151 (3%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLAR 147
           N    + I+ ++G+G FG+V +  + E   L A K++ + + +  E  M+EID+L     
Sbjct: 9   NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH 68

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
            +I     V++ + F Y N++ I+ E       D +     R      ++ + +Q L+++
Sbjct: 69  PNI-----VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDAL 123

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            ++H+ ++IH DLK  NIL      +K+ D+
Sbjct: 124 NYLHDNKIIHRDLKAGNILFTLDGDIKLADF 154

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  113 bits (284), Expect = 8e-31
 Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 17/157 (10%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----------SINKYREAAMIEIDVL 142
            Y     +G G    V  C      +  A+KI+            + + REA + E+D+L
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63

Query: 143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGR 201
           ++++ H       +Q+++ ++      +VF+ +    L+D+L +    +      R++ R
Sbjct: 64  RKVSGHP----NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMR 117

Query: 202 QLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            LLE +  +H+L ++H DLKPENILL     +K+ D+
Sbjct: 118 ALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDF 154

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (268), Expect = 1e-28
 Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 16/173 (9%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARH 148
            + I   +G+G FG V    + + K ++A+K++                E+++   L   
Sbjct: 7   DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 66

Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           +I     +++  +F     + ++ E     ++Y  L+K     F          +L  ++
Sbjct: 67  NI-----LRLYGYFHDATRVYLILEYAPLGTVYRELQK--LSKFDEQRTATYITELANAL 119

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY----KVPSPRHAFSFQTFLSMA 256
           ++ H  R+IH D+KPEN+LL SA  +K+ D+      PS R      T   + 
Sbjct: 120 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 172

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (271), Expect = 2e-28
 Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 5/152 (3%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLA 146
           ++ PRY  LS +GEG +G V   +DN  K  VAIK +       Y +  + EI +L R  
Sbjct: 5   DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 64

Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
             +I G   +      +    + +V   +G  LY  L+    +    D +     Q+L  
Sbjct: 65  HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT---QHLSNDHICYFLYQILRG 121

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           + ++H   ++H DLKP N+LL +   +K+ D+
Sbjct: 122 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDF 153

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (268), Expect = 4e-28
 Identities = 35/143 (24%), Positives = 74/143 (51%), Gaps = 14/143 (9%)

Query: 93  RYRILSKM-GEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG 151
            Y++ S++ G G  G+V++ F+   +E  A+K+++   K R     E+++  R ++    
Sbjct: 12  DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRASQCP-- 65

Query: 152 GTRCVQIRNWFDY----RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
               V+I + ++     R  + IV E L G  L+  ++    ++F      E+ + + E+
Sbjct: 66  --HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 123

Query: 207 VAFMHELRLIHTDLKPENILLVS 229
           + ++H + + H D+KPEN+L  S
Sbjct: 124 IQYLHSINIAHRDVKPENLLYTS 146

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (266), Expect = 9e-28
 Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 11/150 (7%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHDI 150
            +  +S++G G  G V +        ++A K++        R   + E+ VL        
Sbjct: 7   DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-NSP- 64

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                V     F     I I  E + G SL   L+K      P  ++ ++   +++ + +
Sbjct: 65  ---YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTY 119

Query: 210 MHE-LRLIHTDLKPENILLVSAEYVKVPDY 238
           + E  +++H D+KP NIL+ S   +K+ D+
Sbjct: 120 LREKHKIMHRDVKPSNILVNSRGEIKLCDF 149

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (264), Expect = 1e-27
 Identities = 30/149 (20%), Positives = 64/149 (42%), Gaps = 7/149 (4%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLAR 147
           + L  +Y I   +G G FG V  C +   K+    K V+     +     EI +L     
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARH 60

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
            +I     + +   F+    + ++FE + G  +++ +  +++       +     Q+ E+
Sbjct: 61  RNI-----LHLHESFESMEELVMIFEFISGLDIFERINTSAFE-LNEREIVSYVHQVCEA 114

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKV 235
           + F+H   + H D++PENI+  +     +
Sbjct: 115 LQFLHSHNIGHFDIRPENIIYQTRRSSTI 143

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  105 bits (262), Expect = 5e-27
 Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 10/150 (6%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIG 151
            Y I  ++G G FG V    +       A K V + +   +E    EI  +  L RH   
Sbjct: 27  HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-RHP-- 83

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               V + + F+  N + +++E + G  L++ +    +     D   E  RQ+ + +  M
Sbjct: 84  --TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHM 140

Query: 211 HELRLIHTDLKPENILLVSAE--YVKVPDY 238
           HE   +H DLKPENI+  +     +K+ D+
Sbjct: 141 HENNYVHLDLKPENIMFTTKRSNELKLIDF 170

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  104 bits (260), Expect = 1e-26
 Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 10/150 (6%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIG 151
            Y IL ++G G FG V  C +     +   K + +     +     EI ++ +L  H   
Sbjct: 30  YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-HHP-- 86

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
             + + + + F+ +  + ++ E L G  L+D +    Y+      V    RQ  E +  M
Sbjct: 87  --KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYMRQACEGLKHM 143

Query: 211 HELRLIHTDLKPENILLVSAE--YVKVPDY 238
           HE  ++H D+KPENI+  + +   VK+ D+
Sbjct: 144 HEHSIVHLDIKPENIMCETKKASSVKIIDF 173

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (253), Expect = 2e-26
 Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 10/149 (6%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLARHDI 150
            + ++  +GEG +G+V    +   +E VA+KIV         E    EI + + L  H+ 
Sbjct: 6   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-NHE- 63

Query: 151 GGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
                V+        N   +  E   G  L+D +  +     P    +    QL+  V +
Sbjct: 64  ---NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVY 118

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +H + + H D+KPEN+LL   + +K+ D+
Sbjct: 119 LHGIGITHRDIKPENLLLDERDNLKISDF 147

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (254), Expect = 2e-26
 Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 10/172 (5%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIG 151
           +Y    K+G+G  G V    D    + VAI+ +       +E  + EI V++   ++   
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-KNP-- 77

Query: 152 GTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
               V   + +   + + +V E L G SL D + +          +  + R+ L+++ F+
Sbjct: 78  --NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFL 132

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLSMASRVYIC 262
           H  ++IH D+K +NILL     VK+ D+   +       +    + +  ++ 
Sbjct: 133 HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMA 184

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  101 bits (252), Expect = 6e-26
 Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 10/155 (6%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQ 143
           ++    +  L ++G G+FG V    D    E+VAIK +       N+  +  + E+  LQ
Sbjct: 11  DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70

Query: 144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQL 203
           +L RH       +Q R  +   +   +V E    S  D L  +  +      +  +    
Sbjct: 71  KL-RHP----NTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGA 124

Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           L+ +A++H   +IH D+K  NILL     VK+ D+
Sbjct: 125 LQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDF 159

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.2 bits (246), Expect = 3e-25
 Identities = 42/153 (27%), Positives = 78/153 (50%), Gaps = 7/153 (4%)

Query: 93  RYRILSKMGEGTFGQVVECFDNE-KKELVAIKIVRSIN---KYREAAMIEIDVLQRLARH 148
           +Y  ++++GEG +G+V +  D +     VA+K VR          + + E+ VL+ L   
Sbjct: 8   QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 67

Query: 149 D---IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           +   +     V   +  D    + +VFE +   L  +L K      P + ++++  QLL 
Sbjct: 68  EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 127

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            + F+H  R++H DLKP+NIL+ S+  +K+ D+
Sbjct: 128 GLDFLHSHRVVHRDLKPQNILVTSSGQIKLADF 160

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.4 bits (244), Expect = 6e-25
 Identities = 44/149 (29%), Positives = 80/149 (53%), Gaps = 8/149 (5%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD 149
            ++ + K+GEGT+G V +  +    E+VA+K +R           A+ EI +L+ L   +
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           I     V++ +     N + +VFE L   L  F+  ++    P+ L++    QLL+ +AF
Sbjct: 63  I-----VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDY 238
            H  R++H DLKP+N+L+ +   +K+ D+
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADF 146

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.7 bits (242), Expect = 2e-24
 Identities = 37/152 (24%), Positives = 73/152 (48%), Gaps = 7/152 (4%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD 149
           +Y  L+K+G+GTFG+V +    +  + VA+K V   N    +   A+ EI +LQ L   +
Sbjct: 11  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 70

Query: 150 IG---GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
           +         +   +   +  I +VF+     L   L  N    F +  ++ + + LL  
Sbjct: 71  VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG-LLSNVLVKFTLSEIKRVMQMLLNG 129

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           + ++H  +++H D+K  N+L+     +K+ D+
Sbjct: 130 LYYIHRNKILHRDMKAANVLITRDGVLKLADF 161

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 97.4 bits (242), Expect = 2e-24
 Identities = 38/160 (23%), Positives = 80/160 (50%), Gaps = 13/160 (8%)

Query: 87  GENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR--SINKYREAAMIEIDVLQR 144
            E++   Y     +G G F +V+   D   ++LVAIK +   ++     +   EI VL +
Sbjct: 4   AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHK 63

Query: 145 LARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQL 203
           + +H       V + + ++   H+ ++ + + G  L+D + +  +  +       L  Q+
Sbjct: 64  I-KHP----NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQV 116

Query: 204 LESVAFMHELRLIHTDLKPENILLVSAE---YVKVPDYKV 240
           L++V ++H+L ++H DLKPEN+L  S +    + + D+ +
Sbjct: 117 LDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL 156

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 96.4 bits (239), Expect = 3e-24
 Identities = 40/147 (27%), Positives = 63/147 (42%), Gaps = 6/147 (4%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
           RYR+  K+G G+FG +    D    E VAIK+   +        IE  + + +       
Sbjct: 8   RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLEC-VKTKHPQLHIESKIYKMMQGGVG-- 64

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
                IR      ++  +V E LGPSL D     S R F +  V  L  Q++  + ++H 
Sbjct: 65  --IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHS 121

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYK 239
              IH D+KP+N L+   +   +    
Sbjct: 122 KNFIHRDVKPDNFLMGLGKKGNLVYII 148

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.3 bits (234), Expect = 1e-23
 Identities = 39/147 (26%), Positives = 76/147 (51%), Gaps = 8/147 (5%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
             +++ ++G G FG+V   + N   + VA+K ++  +   +A + E +++++L +H    
Sbjct: 14  TLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQL-QHQ--- 68

Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
            R V++      +  I I+ E +   SL DFL+  S     I+ + ++  Q+ E +AF+ 
Sbjct: 69  -RLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
           E   IH DL+  NIL+      K+ D+
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADF 153

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.3 bits (234), Expect = 2e-23
 Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 12/151 (7%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARH 148
            ++    +GEG+F  VV   +       AIKI+                E DV+ RL  H
Sbjct: 9   DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DH 67

Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
                  V++   F     +           L  ++RK    SF     R    +++ ++
Sbjct: 68  P----FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSAL 121

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            ++H   +IH DLKPENILL    ++++ D+
Sbjct: 122 EYLHGKGIIHRDLKPENILLNEDMHIQITDF 152

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 94.1 bits (233), Expect = 2e-23
 Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 6/135 (4%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
            Y++  ++GEG+FG + E  +    + VAIK              E    + LA      
Sbjct: 6   HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPR-RSDAPQLRDEYRTYKLLAGCTG-- 62

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
                +  +     H  +V + LGPSL D L     R F +  V    +Q+L  V  +HE
Sbjct: 63  --IPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHE 119

Query: 213 LRLIHTDLKPENILL 227
             L++ D+KP+N L+
Sbjct: 120 KSLVYRDIKPDNFLI 134

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 94.8 bits (235), Expect = 3e-23
 Identities = 31/151 (20%), Positives = 66/151 (43%), Gaps = 9/151 (5%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARH 148
            + +   +G G FG+V  C   +  ++ A+K +      + +    A+ E  +L  ++  
Sbjct: 5   DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 64

Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           D      V +   F   + +  + + + G  L+  L ++    F    +R    +++  +
Sbjct: 65  DC--PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGL 120

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
             MH   +++ DLKP NILL    +V++ D 
Sbjct: 121 EHMHNRFVVYRDLKPANILLDEHGHVRISDL 151

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.5 bits (229), Expect = 1e-22
 Identities = 32/151 (21%), Positives = 65/151 (43%), Gaps = 11/151 (7%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARH 148
            + +   +G+G+FG+V      +  +  AIK ++     ++   E  M+E  VL     H
Sbjct: 3   DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 62

Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
                    +   F  + ++  V E L G  L   ++      F +        +++  +
Sbjct: 63  PF----LTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGL 116

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            F+H   +++ DLK +NILL    ++K+ D+
Sbjct: 117 QFLHSKGIVYRDLKLDNILLDKDGHIKIADF 147

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.2 bits (226), Expect = 2e-22
 Identities = 36/169 (21%), Positives = 70/169 (41%), Gaps = 13/169 (7%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
             ++L  +G+G FG V+      +   VA+K +++ +   +A + E  V+ +L   ++  
Sbjct: 8   ELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNL-- 62

Query: 153 TRCVQIRNWF-DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFM 210
              VQ+     + +  + IV E +   SL D+LR         D + +    + E++ ++
Sbjct: 63  ---VQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 119

Query: 211 HELRLIHTDLKPENILLVSAEYVKVPDY---KVPSPRHAFSFQTFLSMA 256
                +H DL   N+L+      KV D+   K  S             A
Sbjct: 120 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTA 168

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.5 bits (229), Expect = 2e-22
 Identities = 35/176 (19%), Positives = 73/176 (41%), Gaps = 12/176 (6%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARHD 149
           +  L  +G+GTFG+V+   +       A+KI+R             + E  VLQ      
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEK-LGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           +       ++  F   + +C V E   G  L+  L +   R F  +  R  G +++ ++ 
Sbjct: 67  L-----TALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALE 119

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLSMASRVYICIN 264
           ++H   +++ D+K EN++L    ++K+ D+ +     +          +  Y+   
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPE 175

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.2 bits (226), Expect = 2e-22
 Identities = 32/158 (20%), Positives = 66/158 (41%), Gaps = 18/158 (11%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHDI 150
           Y +L  +G G++G+  +       +++  K +         ++  + E+++L+ L   +I
Sbjct: 6   YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 65

Query: 151 GGTRCVQIRNWFDYR--NHICIVFEKL-GPSLYDFLRKNS--YRSFPIDLVRELGRQLLE 205
                V+  +    R    + IV E   G  L   + K +   +    + V  +  QL  
Sbjct: 66  -----VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 120

Query: 206 SVAFMHEL-----RLIHTDLKPENILLVSAEYVKVPDY 238
           ++   H        ++H DLKP N+ L   + VK+ D+
Sbjct: 121 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF 158

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 90.9 bits (225), Expect = 3e-22
 Identities = 31/147 (21%), Positives = 64/147 (43%), Gaps = 6/147 (4%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
              +  K+G G +G+V E    +    VA+K ++      E  + E  V++ +   ++  
Sbjct: 18  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNL-- 75

Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
              VQ+           I+ E +   +L D+LR+ + +     ++  +  Q+  ++ ++ 
Sbjct: 76  ---VQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 132

Query: 212 ELRLIHTDLKPENILLVSAEYVKVPDY 238
           +   IH DL   N L+     VKV D+
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADF 159

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.4 bits (226), Expect = 4e-22
 Identities = 36/168 (21%), Positives = 68/168 (40%), Gaps = 10/168 (5%)

Query: 78  KDGHYVFAIGEN---LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KY 131
           + G Y   + +    +   YR L  +G G +G V    D      VAIK +        +
Sbjct: 1   RSGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELF 60

Query: 132 REAAMIEIDVLQRLARHDIGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRS 190
            + A  E+ +L+ +   ++ G           D      +V   +G  L   ++      
Sbjct: 61  AKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH---EK 117

Query: 191 FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
              D ++ L  Q+L+ + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 118 LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDF 165

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.1 bits (223), Expect = 4e-22
 Identities = 35/154 (22%), Positives = 66/154 (42%), Gaps = 11/154 (7%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------KYREAAMIEIDVLQRL 145
           +Y++   +G G FG V           VAIK V                  +E+ +L+++
Sbjct: 5   QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64

Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
           +    G    +++ +WF+  +   ++ E+  P    F       +   +L R    Q+LE
Sbjct: 65  SSGFSG---VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEY-VKVPDY 238
           +V   H   ++H D+K ENIL+      +K+ D+
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 155

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 91.0 bits (225), Expect = 6e-22
 Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 10/150 (6%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARH 148
           ++  +  +G G+FG+V+     E     A+KI+        K  E  + E  +LQ +   
Sbjct: 42  QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101

Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
            +         ++ D  N   ++    G  ++  LR+     F     R    Q++ +  
Sbjct: 102 FL----VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFE 155

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++H L LI+ DLKPEN+L+    Y++V D+
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDF 185

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.3 bits (223), Expect = 8e-22
 Identities = 39/170 (22%), Positives = 65/170 (38%), Gaps = 28/170 (16%)

Query: 93  RYRILSKMGEGTFGQVVEC-----FDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRL 145
           R      +G G FG+VVE        ++    VA+K+++  +    REA M E+ VL  L
Sbjct: 24  RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 83

Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRK----------------NSY 188
             H       V +           ++ E      L +FLR+                +  
Sbjct: 84  GNHM----NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 139

Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            +  ++ +     Q+ + +AF+     IH DL   NILL      K+ D+
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDF 189

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.5 bits (219), Expect = 2e-21
 Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 19/166 (11%)

Query: 85  AIGENLTPRY-RILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEID 140
           A+G +   R+ +   ++G G+F  V +  D E    VA   ++        R+    E +
Sbjct: 1   AVGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAE 60

Query: 141 VLQRLARHDIGGTRCVQIRNWF----DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDL 195
           +L+ L +H       V+  + +      +  I +V E +   +L  +L++   +   I +
Sbjct: 61  MLKGL-QHP----NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKV 113

Query: 196 VRELGRQLLESVAFMHEL--RLIHTDLKPENILLVSAEY-VKVPDY 238
           +R   RQ+L+ + F+H     +IH DLK +NI +      VK+ D 
Sbjct: 114 LRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDL 159

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.4 bits (218), Expect = 3e-21
 Identities = 38/149 (25%), Positives = 75/149 (50%), Gaps = 12/149 (8%)

Query: 96  ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK------YREAAMIEIDVLQRLARHD 149
            L  +GEG F  V +  D    ++VAIK ++  ++          A+ EI +LQ L+  +
Sbjct: 2   KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPN 61

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           I     + + + F ++++I +VF+ +   L   ++ NS    P   ++      L+ + +
Sbjct: 62  I-----IGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTP-SHIKAYMLMTLQGLEY 115

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +H+  ++H DLKP N+LL     +K+ D+
Sbjct: 116 LHQHWILHRDLKPNNLLLDENGVLKLADF 144

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.1 bits (220), Expect = 3e-21
 Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 20/166 (12%)

Query: 65  IPRTGSPPWRPDDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKI 124
           +   G  P RP +                Y     +G G+FG V +    +  ELVAIK 
Sbjct: 7   VATPGQGPDRPQEVS--------------YTDTKVIGNGSFGVVYQAKLCDSGELVAIKK 52

Query: 125 VRSINKYREAAMIEIDVLQRLARHDIGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFL 183
           V    +++     E+ ++++L   +I   R             ++ +V + +  ++Y   
Sbjct: 53  VLQDKRFKNR---ELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVA 109

Query: 184 RK--NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL 227
           R    + ++ P+  V+    QL  S+A++H   + H D+KP+N+LL
Sbjct: 110 RHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.8 bits (217), Expect = 4e-21
 Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 6/146 (4%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
             R+  K+G+G FG+V     N     VAIK ++      EA + E  V+++L    +  
Sbjct: 18  SLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL-- 74

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
              VQ+           +       SL DFL+  + +   +  + ++  Q+   +A++  
Sbjct: 75  ---VQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 131

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDY 238
           +  +H DL+  NIL+      KV D+
Sbjct: 132 MNYVHRDLRAANILVGENLVCKVADF 157

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 88.2 bits (218), Expect = 5e-21
 Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 10/149 (6%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQRLARHD 149
           ++IL  +G G+FG+V            A+K+++       K  E    E  +L  +    
Sbjct: 6   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 65

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           I     +++   F     I ++ + +       L + S R FP  + +    ++  ++ +
Sbjct: 66  I-----IRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR-FPNPVAKFYAAEVCLALEY 119

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +H   +I+ DLKPENILL    ++K+ D+
Sbjct: 120 LHSKDIIYRDLKPENILLDKNGHIKITDF 148

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 87.5 bits (216), Expect = 7e-21
 Identities = 30/156 (19%), Positives = 63/156 (40%), Gaps = 10/156 (6%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFD---NEKKELVAIKIVRS--INKYREAAMIEIDVL 142
           E      +I   +G G FG+V         +++  VAIK ++S    K R   + E  ++
Sbjct: 22  EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 81

Query: 143 QRLARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQ 202
            +    ++     + +         + I+ E +     D   + +   F +  +  + R 
Sbjct: 82  GQFDHPNV-----IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRG 136

Query: 203 LLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           +   + ++ ++  +H DL   NIL+ S    KV D+
Sbjct: 137 IAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDF 172

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 86.9 bits (214), Expect = 1e-20
 Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 10/173 (5%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD 149
           +Y  L K+GEGT+G V +  +N  +   A+K +R            + EI +L+ L   +
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNNYGET-FALKKIRLEKEDEGIPSTTIREISILKELKHSN 61

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           I     V++ +    +  + +VFE L   L   L             +    QLL  +A+
Sbjct: 62  I-----VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAY 115

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLSMASRVYIC 262
            H+ R++H DLKP+N+L+     +K+ D+ +         +    + +  Y  
Sbjct: 116 CHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRA 168

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.7 bits (214), Expect = 1e-20
 Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 15/150 (10%)

Query: 88  ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------KYREAAMIEID 140
           EN+   Y    ++G G F  V +C +       A K ++            RE    E+ 
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65

Query: 141 VLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           +L+ + +H       + +   ++ +  + ++ E + G  L+DFL +    S   +   E 
Sbjct: 66  ILKEI-QHP----NVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 118

Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVS 229
            +Q+L  V ++H L++ H DLKPENI+L+ 
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIMLLD 148

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 87.4 bits (215), Expect = 2e-20
 Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 12/154 (7%)

Query: 86  IGENLTP-RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQR 144
            GE     RY ++ K+G G F  V    D      VA+KIVR    Y EAA  EI +LQR
Sbjct: 6   KGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQR 65

Query: 145 LARHDIGGTRCVQIRN----------WFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPID 194
           +   D      +   +                H+ +VFE LG +L   ++K  +R  P+ 
Sbjct: 66  VNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLI 125

Query: 195 LVRELGRQLLESVAFMHELR-LIHTDLKPENILL 227
            V+++ +QLL  + +MH    +IHTD+KPEN+L+
Sbjct: 126 YVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLM 159

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.2 bits (212), Expect = 2e-20
 Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 9/149 (6%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD 149
           +Y  L K+GEGT+G V +  + E  E+VA+K VR  +       +A+ EI +L+ L   +
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
           I     V++ +       + +VFE            +       ++V+    QLL+ + F
Sbjct: 63  I-----VRLHDVLHSDKKLTLVFEFCDQD-LKKYFDSCNGDLDPEIVKSFLFQLLKGLGF 116

Query: 210 MHELRLIHTDLKPENILLVSAEYVKVPDY 238
            H   ++H DLKP+N+L+     +K+ ++
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANF 145

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.4 bits (213), Expect = 2e-20
 Identities = 32/175 (18%), Positives = 65/175 (37%), Gaps = 33/175 (18%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKEL-----VAIKIVR--SINKYREAAMIEIDVLQRL 145
                  +G G FG+V+        +      VA+K+++  + +  REA M E+ ++ +L
Sbjct: 38  NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 97

Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYR--------------- 189
             H+      V +         I ++FE      L ++LR    +               
Sbjct: 98  GSHE----NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLE 153

Query: 190 ------SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
                     + +     Q+ + + F+     +H DL   N+L+   + VK+ D+
Sbjct: 154 EEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDF 208

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 85.6 bits (211), Expect = 2e-20
 Identities = 35/159 (22%), Positives = 61/159 (38%), Gaps = 16/159 (10%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR----SINKYREAAMIEIDVLQR 144
           +L+ RY +   +G G   +V    D      VA+K++R        +      E      
Sbjct: 4   HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 63

Query: 145 LARHDIGGTRCVQIRNWFDYRNH----ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVREL 199
           L    I     V + +  +          IV E + G +L D +              E+
Sbjct: 64  LNHPAI-----VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEV 116

Query: 200 GRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
                +++ F H+  +IH D+KP NI++ +   VKV D+
Sbjct: 117 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDF 155

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 85.7 bits (211), Expect = 4e-20
 Identities = 27/152 (17%), Positives = 66/152 (43%), Gaps = 15/152 (9%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
            Y+++ K+G G + +V E  +    E V +KI++ + K +     EI +L+ L       
Sbjct: 36  DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK--IKREIKILENLRGGP--- 90

Query: 153 TRCVQIRNWF--DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAF 209
              + + +           +VFE +         +           +R    ++L+++ +
Sbjct: 91  -NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDY 144

Query: 210 MHELRLIHTDLKPENILLVSAE-YVKVPDYKV 240
            H + ++H D+KP N+++      +++ D+ +
Sbjct: 145 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 176

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.6 bits (209), Expect = 5e-20
 Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 14/150 (9%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVR---SINKYREAAMIEIDVLQRLARHD 149
           +  +  ++G G+FG V +   +     VA+K++       +  +A   E+ VL++    +
Sbjct: 9   QITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65

Query: 150 IGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I     +    +      + IV +   G SLY  L     + F +  + ++ RQ  + + 
Sbjct: 66  I-----LLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETK-FEMIKLIDIARQTAQGMD 118

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           ++H   +IH DLK  NI L     VK+ D+
Sbjct: 119 YLHAKSIIHRDLKSNNIFLHEDLTVKIGDF 148

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.7 bits (211), Expect = 6e-20
 Identities = 35/154 (22%), Positives = 69/154 (44%), Gaps = 7/154 (4%)

Query: 89  NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRL 145
            +  RY+ LS +G G +G V   FD +    VA+K +        + +    E+ +L+ +
Sbjct: 15  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74

Query: 146 ARHDIGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLL 204
              ++ G           +  N + +V   +G  L + ++    +    D V+ L  Q+L
Sbjct: 75  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQIL 131

Query: 205 ESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
             + ++H   +IH DLKP N+ +     +K+ D+
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 165

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.2 bits (205), Expect = 2e-19
 Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 6/149 (4%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
               + ++G G FG V   +    K+ VAIK +R      E  + E +V+ +L  H    
Sbjct: 6   ELTFVQEIGSGQFGLVHLGYW-LNKDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHP--- 60

Query: 153 TRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE 212
            + VQ+      +  IC+VFE +         +     F  + +  +   + E +A++ E
Sbjct: 61  -KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 119

Query: 213 LRLIHTDLKPENILLVSAEYVKVPDYKVP 241
             +IH DL   N L+   + +KV D+ + 
Sbjct: 120 ACVIHRDLAARNCLVGENQVIKVSDFGMT 148

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.9 bits (204), Expect = 3e-19
 Identities = 33/178 (18%), Positives = 68/178 (38%), Gaps = 23/178 (12%)

Query: 93  RYRILSKMGEGTFGQVVECFDNE--KKELVAIKIVRSIN--KYREAAMIEIDVLQRLARH 148
             +    +GEG FGQV++    +   +   AIK ++             E++VL +L  H
Sbjct: 11  DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 70

Query: 149 DIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSY--------------RSFPI 193
                  + +    ++R ++ +  E     +L DFLRK+                 +   
Sbjct: 71  P----NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 126

Query: 194 DLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQT 251
             +      +   + ++ + + IH DL   NIL+      K+ D+ +   +  +  +T
Sbjct: 127 QQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKT 184

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.1 bits (202), Expect = 4e-19
 Identities = 32/151 (21%), Positives = 60/151 (39%), Gaps = 11/151 (7%)

Query: 93  RYRILSKMGEGTFGQVVECFD---NEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLAR 147
           R  +   +GEG FG V +            VAIK  ++   +  RE  + E   +++   
Sbjct: 8   RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-D 66

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
           H       V++       N + I+ E           +    S  +  +     QL  ++
Sbjct: 67  HP----HIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 121

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
           A++   R +H D+   N+L+ S + VK+ D+
Sbjct: 122 AYLESKRFVHRDIAARNVLVSSNDCVKLGDF 152

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.1 bits (204), Expect = 4e-19
 Identities = 34/164 (20%), Positives = 66/164 (40%), Gaps = 8/164 (4%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHD 149
           RY+ L  +G G  G V   +D      VAIK +        + + A  E+ +++ +   +
Sbjct: 18  RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 77

Query: 150 IGGTR-CVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVA 208
           I         +   +    + +V E +  +L   ++         + +  L  Q+L  + 
Sbjct: 78  IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIK 133

Query: 209 FMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTF 252
            +H   +IH DLKP NI++ S   +K+ D+ +          T 
Sbjct: 134 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP 177

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.3 bits (195), Expect = 4e-18
 Identities = 30/145 (20%), Positives = 60/145 (41%), Gaps = 6/145 (4%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGT 153
              L ++G G FG V       + + VAIK+++  +   +  + E  V+  L+   +   
Sbjct: 6   LTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKL--- 61

Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             VQ+      +  I I+ E +         +     F    + E+ + + E++ ++   
Sbjct: 62  --VQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 119

Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
           + +H DL   N L+     VKV D+
Sbjct: 120 QFLHRDLAARNCLVNDQGVVKVSDF 144

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.5 bits (195), Expect = 5e-18
 Identities = 34/173 (19%), Positives = 64/173 (36%), Gaps = 9/173 (5%)

Query: 93  RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGG 152
              +   +G+G FG+V       + E VA+KI  S  +       EI     L   +I G
Sbjct: 4   TIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILG 61

Query: 153 TRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSY-----RSFPIDLVRELGRQLLES 206
                 ++   +   + +V +     SL+D+L + +          +     L    +E 
Sbjct: 62  FIAADNKDNGTW-TQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEI 120

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLSMASRV 259
           V    +  + H DLK +NIL+       + D  +     + +    ++   RV
Sbjct: 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV 173

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.4 bits (195), Expect = 5e-18
 Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 12/145 (8%)

Query: 99  KMGEGTFGQVVECFDNEKKE--LVAIKIVR--SINKYREAAMIEIDVLQRLARHDIGGTR 154
           ++G G FG V +     +K+   VAIK+++  +     E  M E  ++ +L    I    
Sbjct: 16  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYI---- 71

Query: 155 CVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
            V++         + +V E   G  L+ FL        P+  V EL  Q+   + ++ E 
Sbjct: 72  -VRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK 128

Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             +H DL   N+LLV+  Y K+ D+
Sbjct: 129 NFVHRDLAARNVLLVNRHYAKISDF 153

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.5 bits (195), Expect = 7e-18
 Identities = 33/157 (21%), Positives = 71/157 (45%), Gaps = 15/157 (9%)

Query: 93  RYRILSKMGEGTFGQV---VECFDNEKKELVAIKIVRSIN-----KYREAAMIEIDVLQR 144
            + +L  +G G +G+V    +   ++  +L A+K+++        K  E    E  VL+ 
Sbjct: 25  NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 84

Query: 145 LARHDIGGTRCVQIRNWFDYRNHICIVFE-KLGPSLYDFLRKNSYRSFPIDLVRELGRQL 203
           + +        V +   F     + ++ +   G  L+  L +     F    V+    ++
Sbjct: 85  IRQSPF----LVTLHYAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEI 138

Query: 204 LESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV 240
           + ++  +H+L +I+ D+K ENILL S  +V + D+ +
Sbjct: 139 VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGL 175

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 79.1 bits (194), Expect = 8e-18
 Identities = 32/176 (18%), Positives = 63/176 (35%), Gaps = 35/176 (19%)

Query: 93  RYRILSKMGEGTFGQVVEC-----FDNEKKELVAIKIVR--SINKYREAAMIEIDVLQRL 145
               +  +GEG FG+V +         E   +VA+K+++  +    +     E  ++   
Sbjct: 14  NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF 73

Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKNSYRS-------------- 190
                     V++         +C++FE +    L +FLR  S  +              
Sbjct: 74  DNP-----NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 128

Query: 191 --------FPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
                           + RQ+   +A++ E + +H DL   N L+     VK+ D+
Sbjct: 129 VSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADF 184

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.8 bits (193), Expect = 9e-18
 Identities = 28/170 (16%), Positives = 64/170 (37%), Gaps = 28/170 (16%)

Query: 93  RYRILSKMGEGTFGQVVECFD-------NEKKELVAIKIVR--SINKYREAAMIEIDVLQ 143
           R  +   +GEG FGQVV             +   VA+K+++  +  K     + E+++++
Sbjct: 14  RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 73

Query: 144 RLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLR--------------KNSY 188
            + +H       + +         + ++ E     +L ++L+               N  
Sbjct: 74  MIGKHKN----IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 129

Query: 189 RSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
                  +     Q+   + ++   + IH DL   N+L+     +K+ D+
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADF 179

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.3 bits (192), Expect = 1e-17
 Identities = 30/155 (19%), Positives = 62/155 (40%), Gaps = 11/155 (7%)

Query: 93  RYRILSKMGEGTFGQVVECF----DNEKKELVAIKIVR--SINKYREAAMIEIDVLQRLA 146
                  +G G FG+V +        +K+  VAIK ++     K R   + E  ++ + +
Sbjct: 8   CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS 67

Query: 147 RHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLES 206
            H+I     +++         + I+ E +     D   +     F +  +  + R +   
Sbjct: 68  HHNI-----IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAG 122

Query: 207 VAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVP 241
           + ++  +  +H DL   NIL+ S    KV D+ + 
Sbjct: 123 MKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLS 157

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.1 bits (184), Expect = 1e-16
 Identities = 34/145 (23%), Positives = 70/145 (48%), Gaps = 12/145 (8%)

Query: 99  KMGEGTFGQVVECFDNEKK--ELVAIKIVR---SINKYREAAMIEIDVLQRLARHDIGGT 153
           ++G G FG V + +   KK  + VA+KI++   +    ++  + E +V+Q+L  +     
Sbjct: 14  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNP---- 68

Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
             V++    +  + + ++       L  +L++N  R      + EL  Q+   + ++ E 
Sbjct: 69  YIVRMIGICEAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEES 126

Query: 214 RLIHTDLKPENILLVSAEYVKVPDY 238
             +H DL   N+LLV+  Y K+ D+
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDF 151

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.4 bits (182), Expect = 2e-16
 Identities = 31/152 (20%), Positives = 63/152 (41%), Gaps = 13/152 (8%)

Query: 93  RYRILSKMGEGTFGQVVECF---DNEKKELVAIKIVR----SINKYREAAMIEIDVLQRL 145
             R+L K+G+G+FG V        + K   VA+K ++    S  +  +  + E++ +  L
Sbjct: 9   DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68

Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLE 205
              ++     +++         + +V E           +     F +  +     Q+ E
Sbjct: 69  DHRNL-----IRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAE 122

Query: 206 SVAFMHELRLIHTDLKPENILLVSAEYVKVPD 237
            + ++   R IH DL   N+LL + + VK+ D
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGD 154

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.9 bits (183), Expect = 3e-16
 Identities = 29/165 (17%), Positives = 67/165 (40%), Gaps = 21/165 (12%)

Query: 93  RYRILSKMGEGTFGQVVECFD-----NEKKELVAIKIVR--SINKYREAAMIEIDVLQRL 145
           +  +  ++G+G+FG V E        +E +  VAIK V   +  + R   + E  V++  
Sbjct: 21  KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF 80

Query: 146 ARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYDFLRKN--------SYRSFPIDLV 196
             H +     V++           ++ E +    L  +LR                +  +
Sbjct: 81  NCHHV-----VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 135

Query: 197 RELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVP 241
            ++  ++ + +A+++  + +H DL   N ++     VK+ D+ + 
Sbjct: 136 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 180

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.9 bits (178), Expect = 1e-15
 Identities = 29/151 (19%), Positives = 63/151 (41%), Gaps = 12/151 (7%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKEL----VAIKIVRSIN--KYREAAMIEIDVLQRLAR 147
           ++ +  +G G FG V +     + E     VAIK +R     K  +  + E  V+  +  
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70

Query: 148 HDIGGTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESV 207
             +      ++           I        L D++R++   +     +     Q+ + +
Sbjct: 71  PHV-----CRLLGICLTSTVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGM 124

Query: 208 AFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
            ++ + RL+H DL   N+L+ + ++VK+ D+
Sbjct: 125 NYLEDRRLVHRDLAARNVLVKTPQHVKITDF 155

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.5 bits (174), Expect = 3e-15
 Identities = 34/169 (20%), Positives = 63/169 (37%), Gaps = 27/169 (15%)

Query: 93  RYRILSKMGEGTFGQVVECFD-----NEKKELVAIKIVR--SINKYREAAMIEIDVLQRL 145
           R ++   +G G FGQV+E              VA+K+++  + +    A M E+ +L  +
Sbjct: 14  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 73

Query: 146 ARHDIGGTRCVQIRN-WFDYRNHICIVFEKL-GPSLYDFLRKN--------------SYR 189
             H       V +          + ++ E     +L  +LR                   
Sbjct: 74  GHHLN----VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD 129

Query: 190 SFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY 238
              ++ +     Q+ + + F+   + IH DL   NILL     VK+ D+
Sbjct: 130 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 178

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.6 bits (172), Expect = 8e-15
 Identities = 26/166 (15%), Positives = 56/166 (33%), Gaps = 9/166 (5%)

Query: 99  KMGEGTFGQVVECFD---NEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGT 153
            +G G FG V        + KK   A+K +  I         + E  +++  +  ++   
Sbjct: 34  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV--- 90

Query: 154 RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHEL 213
               +           +V   +         +N   +  +  +   G Q+ + + F+   
Sbjct: 91  -LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 149

Query: 214 RLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFSFQTFLSMASRV 259
           + +H DL   N +L     VKV D+ +    +   F +  +     
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK 195

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 60.6 bits (146), Expect = 7e-12
 Identities = 20/144 (13%), Positives = 43/144 (29%), Gaps = 3/144 (2%)

Query: 94  YRILSKMGEGTFGQVVECFDNEKKELVAIKIVR-SINKYREAAMIEIDVLQRLARHD-IG 151
             I   MGEG    V  C+  +  E   +K  +     +++            +      
Sbjct: 2   DAIGKLMGEGKESAVFNCYSEKFGE-CVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRS 60

Query: 152 GTRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMH 211
                +            +   +    L + +         ++   E+   +LE VA  +
Sbjct: 61  ARNEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFY 120

Query: 212 ELRLIHTDLKPENILLVSAEYVKV 235
              ++H DL   N+L+       +
Sbjct: 121 HRGIVHGDLSQYNVLVSEEGIWII 144

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	264
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.93
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.8
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	98.48
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.36
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	98.2
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	97.77
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	97.7

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-43  Score=288.71  Aligned_cols=165  Identities=23%  Similarity=0.361  Sum_probs=146.3

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      .++|++++.||+|+||+||+|+++.+|+.||+|+++...  ...+.+.+|+.+++.++|+|+     +++++++.+++.+
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnI-----v~~~~~~~~~~~~   78 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV-----VKFYGHRREGNIQ   78 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTB-----CCEEEEEEETTEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCE-----eeEeeeeccCcee
Confidence            467999999999999999999999999999999987543  334678899999999999888     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC--
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH--  245 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~--  245 (264)
                      |+||||+ +|+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+|+...  
T Consensus        79 ~ivmEy~~gg~L~~~l~~~~--~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~  156 (271)
T d1nvra_          79 YLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN  156 (271)
T ss_dssp             EEEEECCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEET
T ss_pred             EEEEeccCCCcHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccC
Confidence            9999999 889999997654  79999999999999999999999999999999999999999999999999997532  


Q ss_pred             ------CCcccceeeeeceeEee
Q 024661          246 ------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ------~~~~~~~~y~ape~~~~  262 (264)
                            ....||+.|||||++.+
T Consensus       157 ~~~~~~~~~~GT~~Y~APE~~~~  179 (271)
T d1nvra_         157 NRERLLNKMCGTLPYVAPELLKR  179 (271)
T ss_dssp             TEECCBCCCCSCGGGSCTHHHHC
T ss_pred             CccccccceeeCcCccCHhHhcC
Confidence                  23468999999998753

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-42  Score=281.43  Aligned_cols=164  Identities=22%  Similarity=0.344  Sum_probs=149.1

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++++.||+|+||+||+|+++.+++.||+|++.+..    ...+.+.+|+++++.++|+|+     +++++++.+++.
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnI-----v~~~~~~~~~~~   80 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-----LRLYGYFHDATR   80 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTB-----CCEEEEEECSSE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCC-----CeEEEEEEECCE
Confidence            57999999999999999999999999999999997532    345678899999999999888     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      +|+||||+ +|+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+|.....
T Consensus        81 ~~ivmEy~~~g~L~~~l~~~~--~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~  158 (263)
T d2j4za1          81 VYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS  158 (263)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCC
T ss_pred             EEEEEeecCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCC
Confidence            99999999 899999998765  799999999999999999999999999999999999999999999999999976543


Q ss_pred             ----CcccceeeeeceeEee
Q 024661          247 ----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ----~~~~~~~y~ape~~~~  262 (264)
                          ...||..|||||++.+
T Consensus       159 ~~~~~~~Gt~~Y~APE~~~~  178 (263)
T d2j4za1         159 SRRTTLCGTLDYLPPEMIEG  178 (263)
T ss_dssp             CCCEETTEEGGGCCHHHHTT
T ss_pred             CcccccCCCCcccCHHHHcC
Confidence                2358999999998754

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-42  Score=285.54  Aligned_cols=164  Identities=26%  Similarity=0.347  Sum_probs=148.3

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      .++|++.++||+|+||+||+|.++.+|+.||+|+++... ...+.+.+|+.+++.++|+|+     ++++++|.+.+.+|
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnI-----v~~~~~~~~~~~~~   93 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI-----VNYLDSYLVGDELW   93 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTB-----CCEEEEEEETTEEE
T ss_pred             ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCE-----eeEeEEEEECCEEE
Confidence            457999999999999999999999999999999997543 345778999999999999988     99999999999999


Q ss_pred             EEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC---
Q 024661          170 IVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH---  245 (264)
Q Consensus       170 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~---  245 (264)
                      +||||+ +|+|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+|+...   
T Consensus        94 ivmEy~~gg~L~~~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~  170 (293)
T d1yhwa1          94 VVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ  170 (293)
T ss_dssp             EEEECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             EEEEecCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeecccc
Confidence            999999 99999988764   59999999999999999999999999999999999999999999999999997542   


Q ss_pred             ---CCcccceeeeeceeEee
Q 024661          246 ---AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ---~~~~~~~~y~ape~~~~  262 (264)
                         ....||+.|||||++.+
T Consensus       171 ~~~~~~~gt~~Y~aPE~~~~  190 (293)
T d1yhwa1         171 SKRSTMVGTPYWMAPEVVTR  190 (293)
T ss_dssp             CCBCCCCSCGGGCCHHHHSS
T ss_pred             ccccccccCCCccChhhhcC
Confidence               23358999999998754

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-42  Score=289.87  Aligned_cols=167  Identities=22%  Similarity=0.312  Sum_probs=149.6

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      ...++|+++++||+|+||+||+|+++.+|+.||+|+++..  ....+.+.+|+.+++.++|+|+     ++++++|.+.+
T Consensus         3 l~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnI-----v~l~~~~~~~~   77 (322)
T d1s9ja_           3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI-----VGFYGAFYSDG   77 (322)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTB-----CCEEEEEECSS
T ss_pred             CCccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCC-----CcEEEEEEECC
Confidence            4567899999999999999999999999999999999743  3446788999999999999888     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      .+|+||||+ +|+|.+++.+..  .+++..++.++.||+.||.|||+ +||+||||||+|||++.+|++||+|||+|+..
T Consensus        78 ~~~iVmEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~  155 (322)
T d1s9ja_          78 EISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL  155 (322)
T ss_dssp             EEEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred             EEEEEEEcCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCcccc
Confidence            999999999 899999998765  79999999999999999999997 59999999999999999999999999999753


Q ss_pred             ----CCCcccceeeeeceeEee
Q 024661          245 ----HAFSFQTFLSMASRVYIC  262 (264)
Q Consensus       245 ----~~~~~~~~~y~ape~~~~  262 (264)
                          .....||..|||||++.+
T Consensus       156 ~~~~~~~~~GT~~Y~APEvl~~  177 (322)
T d1s9ja_         156 IDSMANSFVGTRSYMSPERLQG  177 (322)
T ss_dssp             HHHTC---CCSSCCCCHHHHHC
T ss_pred             CCCccccccCCccccCchHHcC
Confidence                234479999999998754

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-42  Score=282.65  Aligned_cols=164  Identities=26%  Similarity=0.440  Sum_probs=148.2

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      +.|++++.||+|+||+||+|+++.+++.||+|++++. ....+.+.+|+++++.++|+|+     +++++++.+.+.+|+
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnI-----v~l~~~~~~~~~~~l   86 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI-----VKLLDAFYYENNLWI   86 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTB-----CCEEEEEEETTEEEE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCC-----CeEEEEEeeCCeEEE
Confidence            5699999999999999999999999999999999753 3445678899999999999888     999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC----
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH----  245 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~----  245 (264)
                      ||||+ +|+|.+++.+.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++++||+|||+|....    
T Consensus        87 vmEy~~~g~L~~~~~~~~-~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~  165 (288)
T d2jfla1          87 LIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ  165 (288)
T ss_dssp             EEECCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHH
T ss_pred             EEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCCcc
Confidence            99999 999999987643 369999999999999999999999999999999999999999999999999997532    


Q ss_pred             --CCcccceeeeeceeEe
Q 024661          246 --AFSFQTFLSMASRVYI  261 (264)
Q Consensus       246 --~~~~~~~~y~ape~~~  261 (264)
                        ....||+.|||||++.
T Consensus       166 ~~~~~~Gt~~y~APE~l~  183 (288)
T d2jfla1         166 RRDSFIGTPYWMAPEVVM  183 (288)
T ss_dssp             HHTCCCSCCTTCCHHHHT
T ss_pred             cccccccccccCCHHHHh
Confidence              2456899999999874

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.6e-42  Score=284.59  Aligned_cols=164  Identities=25%  Similarity=0.313  Sum_probs=146.5

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech----hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      .+|+++++||+|+||+||+|++..+++.||||++...    ....+.+.+|+.+++.++|+|+     +++++++.+.+.
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnI-----v~~~~~~~~~~~   89 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNT-----IQYRGCYLREHT   89 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEEEETTE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCE-----eeEEEEEEECCE
Confidence            4599999999999999999999999999999998743    2344678899999999999888     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      +|+||||+ +|+|..++....  .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|.....
T Consensus        90 ~~iv~E~~~~g~l~~~~~~~~--~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~  167 (309)
T d1u5ra_          90 AWLVMEYCLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  167 (309)
T ss_dssp             EEEEEECCSEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred             EEEEEEecCCCchHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCC
Confidence            99999999 777776666554  799999999999999999999999999999999999999999999999999986543


Q ss_pred             --CcccceeeeeceeEee
Q 024661          247 --FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 --~~~~~~~y~ape~~~~  262 (264)
                        ...||+.|||||++.+
T Consensus       168 ~~~~~GT~~Y~APE~~~~  185 (309)
T d1u5ra_         168 ANSFVGTPYWMAPEVILA  185 (309)
T ss_dssp             BCCCCSCGGGCCHHHHTT
T ss_pred             CCccccCccccCHHHHhc
Confidence              4469999999998754

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-42  Score=280.55  Aligned_cols=163  Identities=23%  Similarity=0.303  Sum_probs=147.7

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++++.||+|+||+||+|+++.+|+.||||++++..    ...+.+.+|+++++.++|+|+     +++++++.+++.
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnI-----v~l~~~~~~~~~   82 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF-----VKLYFTFQDDEK   82 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTB-----CCEEEEEECSSE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCe-----eEEEEEEEECCE
Confidence            56999999999999999999999999999999997532    344678999999999999988     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      +|+||||+ +|+|.+++....  .+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+|+....
T Consensus        83 ~~ivmEy~~gg~L~~~~~~~~--~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~  160 (288)
T d1uu3a_          83 LYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP  160 (288)
T ss_dssp             EEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred             EEEEEEccCCCCHHHhhhccC--CCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceeccc
Confidence            99999999 899999998776  799999999999999999999999999999999999999999999999999975421


Q ss_pred             --------CcccceeeeeceeEe
Q 024661          247 --------FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 --------~~~~~~~y~ape~~~  261 (264)
                              ...||..|||||++.
T Consensus       161 ~~~~~~~~~~~GT~~Y~APE~~~  183 (288)
T d1uu3a_         161 ESKQARANSFVGTAQYVSPELLT  183 (288)
T ss_dssp             ---------CCCCGGGCCHHHHH
T ss_pred             CCcccccccccCCccccCceeec
Confidence                    235899999999864

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.5e-42  Score=280.56  Aligned_cols=166  Identities=19%  Similarity=0.247  Sum_probs=151.1

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      .++|++.++||+|+||.||+|.++.+++.||||+++......+.+.+|+++++.++|+|+     +++++++.+.+.+|+
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnI-----v~~~~~~~~~~~~~i   90 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNL-----VQLLGVCTREPPFYI   90 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTB-----CCEEEEECSSSSCEE
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCE-----ecCCccEeeCCeeEE
Confidence            467999999999999999999999999999999998766667889999999999999988     999999999999999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCCc-
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAFS-  248 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~~-  248 (264)
                      ||||+ +|+|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+|+...... 
T Consensus        91 v~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~  170 (287)
T d1opja_          91 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY  170 (287)
T ss_dssp             EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSS
T ss_pred             EeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeecCCCCc
Confidence            99999 8999999987766689999999999999999999999999999999999999999999999999998754322 


Q ss_pred             ------ccceeeeeceeEe
Q 024661          249 ------FQTFLSMASRVYI  261 (264)
Q Consensus       249 ------~~~~~y~ape~~~  261 (264)
                            .++..|||||++.
T Consensus       171 ~~~~~~~g~~~y~aPE~~~  189 (287)
T d1opja_         171 TAHAGAKFPIKWTAPESLA  189 (287)
T ss_dssp             EEETTEEECGGGCCHHHHH
T ss_pred             eeeccccccccccChHHHc
Confidence                  2566799999764

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-41  Score=282.93  Aligned_cols=164  Identities=22%  Similarity=0.339  Sum_probs=149.3

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++++.||+|+||.||+|+++.+|+.||+|++++..    ...+.+.+|+.+++.++|+|+     ++++++|.+.+.
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~I-----v~l~~~~~~~~~   79 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL-----TALKYAFQTHDR   79 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTB-----CCEEEEEECSSE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCE-----EEEEeeeccccc
Confidence            56999999999999999999999999999999998542    345678899999999999888     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      +|+||||+ +|+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|++||+|||+|+....
T Consensus        80 ~~iv~ey~~gg~L~~~~~~~~--~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~  157 (337)
T d1o6la_          80 LCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS  157 (337)
T ss_dssp             EEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred             cccceeccCCCchhhhhhccc--CCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeeccccccccc
Confidence            99999999 999999999876  799999999999999999999999999999999999999999999999999976432


Q ss_pred             ------CcccceeeeeceeEee
Q 024661          247 ------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ------~~~~~~~y~ape~~~~  262 (264)
                            ..+||+.|||||++.+
T Consensus       158 ~~~~~~~~~GT~~Y~aPE~~~~  179 (337)
T d1o6la_         158 DGATMKTFCGTPEYLAPEVLED  179 (337)
T ss_dssp             TTCCBCCCEECGGGCCGGGGSS
T ss_pred             CCcccccceeCHHHhhhhhccC
Confidence                  3468999999998754

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.4e-42  Score=282.98  Aligned_cols=170  Identities=24%  Similarity=0.402  Sum_probs=138.6

Q ss_pred             eCCccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh--hhHHHHHHHHHHHHHHhccCCCCcceEEEceeee
Q 024661           86 IGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN--KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        86 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~  163 (264)
                      ..+.+.++|++.+.||+|+||+||+|+++.+++.||+|++.+..  .....+.+|+.+++.++|+|+     +++++++.
T Consensus         3 ~~edi~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnI-----v~l~~~~~   77 (307)
T d1a06a_           3 QAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNI-----VALDDIYE   77 (307)
T ss_dssp             ECSCGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTB-----CCEEEEEE
T ss_pred             CCCCCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCC-----CcEEEEEE
Confidence            34567788999999999999999999999999999999997543  334567889999999999888     99999999


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEee---cCCcEEeccCC
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV---SAEYVKVPDYK  239 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~---~~~~v~l~Dfg  239 (264)
                      +++.+|+||||+ ||+|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||+.   .++.+||+|||
T Consensus        78 ~~~~~~lvmE~~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG  155 (307)
T d1a06a_          78 SGGHLYLIMQLVSGGELFDRIVEKG--FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFG  155 (307)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHTCS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-
T ss_pred             ECCEEEEEEeccCCCcHHHhhhccc--CCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccc
Confidence            999999999999 899999998765  799999999999999999999999999999999999995   47899999999


Q ss_pred             CCCcCCC-----CcccceeeeeceeEee
Q 024661          240 VPSPRHA-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       240 ~a~~~~~-----~~~~~~~y~ape~~~~  262 (264)
                      +|.....     ...||+.|||||++.+
T Consensus       156 ~a~~~~~~~~~~~~~GT~~y~APE~~~~  183 (307)
T d1a06a_         156 LSKMEDPGSVLSTACGTPGYVAPEVLAQ  183 (307)
T ss_dssp             -----------------CTTSCHHHHTT
T ss_pred             eeEEccCCCeeeeeeeCccccCcHHHcC
Confidence            9976432     3358999999998754

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=5.1e-41  Score=282.12  Aligned_cols=167  Identities=24%  Similarity=0.362  Sum_probs=148.3

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech-hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      +.++|++++.||+|+||.||+|+++.+|+.||+|++.+. ....+.+.+|+.+++.++|+|+     +++++++.+++.+
T Consensus        24 il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnI-----v~~~~~~~~~~~~   98 (350)
T d1koaa2          24 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL-----VNLHDAFEDDNEM   98 (350)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTB-----CCEEEEEEETTEE
T ss_pred             CccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCC-----CcEEEEEEECCEE
Confidence            346899999999999999999999999999999998753 3445778899999999999988     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec--CCcEEeccCCCCCcCC
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS--AEYVKVPDYKVPSPRH  245 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~--~~~v~l~Dfg~a~~~~  245 (264)
                      |+||||+ +|+|.+++.... ..+++..++.|+.||+.||+|||++||+||||||+|||++.  ++.+||+|||+|+...
T Consensus        99 ~ivmE~~~gg~L~~~l~~~~-~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~  177 (350)
T d1koaa2          99 VMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD  177 (350)
T ss_dssp             EEEECCCCSCBHHHHHTCTT-SCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECC
T ss_pred             EEEEEcCCCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecc
Confidence            9999999 999999996543 36999999999999999999999999999999999999964  5789999999998654


Q ss_pred             CC-----cccceeeeeceeEee
Q 024661          246 AF-----SFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~~-----~~~~~~y~ape~~~~  262 (264)
                      ..     ..||..|||||++.+
T Consensus       178 ~~~~~~~~~gT~~Y~aPEv~~~  199 (350)
T d1koaa2         178 PKQSVKVTTGTAEFAAPEVAEG  199 (350)
T ss_dssp             TTSCEEEECSCTTTCCHHHHHT
T ss_pred             cccccceecCcccccCHHHHcC
Confidence            32     357899999998753

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-41  Score=271.43  Aligned_cols=166  Identities=25%  Similarity=0.382  Sum_probs=144.8

Q ss_pred             ccCCCe-EEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           89 NLTPRY-RILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        89 ~~~~~y-~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ...++| ++.++||+|+||+||+|++..+++.||+|.+...   ....+.+.+|++++++++|+|+     +++++++.+
T Consensus         5 ~~~gry~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnI-----v~~~~~~~~   79 (270)
T d1t4ha_           5 SNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNI-----VRFYDSWES   79 (270)
T ss_dssp             CTTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEEEE
T ss_pred             CCCCCEEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCe-----eeEEEEEee
Confidence            444566 6778999999999999999999999999998753   3445678899999999999988     999999875


Q ss_pred             ----CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCCEEee-cCCcEEec
Q 024661          165 ----RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELR--LIHTDLKPENILLV-SAEYVKVP  236 (264)
Q Consensus       165 ----~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivH~dikp~Nili~-~~~~v~l~  236 (264)
                          +..+|+||||+ +|+|.+++.+..  .+++..++.++.||+.||+|||+++  |+||||||+|||++ .++.+||+
T Consensus        80 ~~~~~~~~~ivmE~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~  157 (270)
T d1t4ha_          80 TVKGKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIG  157 (270)
T ss_dssp             ESSSCEEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEEC
T ss_pred             ccccCCEEEEEEeCCCCCcHHHHHhccc--cccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEe
Confidence                46789999999 999999998765  7999999999999999999999998  99999999999997 57899999


Q ss_pred             cCCCCCcCCC----CcccceeeeeceeEe
Q 024661          237 DYKVPSPRHA----FSFQTFLSMASRVYI  261 (264)
Q Consensus       237 Dfg~a~~~~~----~~~~~~~y~ape~~~  261 (264)
                      |||+|+....    ...||+.|||||++.
T Consensus       158 DFGla~~~~~~~~~~~~GT~~Y~aPE~~~  186 (270)
T d1t4ha_         158 DLGLATLKRASFAKAVIGTPEFMAPEMYE  186 (270)
T ss_dssp             CTTGGGGCCTTSBEESCSSCCCCCGGGGG
T ss_pred             ecCcceeccCCccCCcccCccccCHHHhC
Confidence            9999976443    235899999999764

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5.9e-41  Score=278.22  Aligned_cols=164  Identities=24%  Similarity=0.346  Sum_probs=148.9

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++++.||+|+||+||+|+++.+|+.||+|++++..    ...+.+.+|+.+++.++|+|+     +++++++.+.+.
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnI-----v~~~~~~~~~~~   78 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFI-----IRMWGTFQDAQQ   78 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTB-----CCEEEEEECSSE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcCh-----hheeeeEeeCCe
Confidence            46999999999999999999999999999999997532    345678899999999999988     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      +|+||||+ |++|..++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+....
T Consensus        79 ~~ivmE~~~gg~l~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~  156 (316)
T d1fota_          79 IFMIMDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD  156 (316)
T ss_dssp             EEEEECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred             eeeEeeecCCccccccccccc--cccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEecc
Confidence            99999999 899999998776  789999999999999999999999999999999999999999999999999976443


Q ss_pred             ---CcccceeeeeceeEee
Q 024661          247 ---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~~  262 (264)
                         ...||+.|||||++.+
T Consensus       157 ~~~~~~Gt~~Y~APE~l~~  175 (316)
T d1fota_         157 VTYTLCGTPDYIAPEVVST  175 (316)
T ss_dssp             CBCCCCSCTTTCCHHHHTT
T ss_pred             ccccccCcccccCHHHHcC
Confidence               3468999999998753

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-40  Score=273.66  Aligned_cols=168  Identities=24%  Similarity=0.447  Sum_probs=149.9

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-------hhHHHHHHHHHHHHHHhccCCCCcceEEEce
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------KYREAAMIEIDVLQRLARHDIGGTRCVQIRN  160 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~  160 (264)
                      +.+.++|++++.||+|+||+||+|+++.+|+.||+|++++..       ...+.+.+|+.+++.++|+|+     +++++
T Consensus         6 ~~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnI-----v~~~~   80 (293)
T d1jksa_           6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV-----ITLHE   80 (293)
T ss_dssp             SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTB-----CCEEE
T ss_pred             CCcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCC-----CcEEE
Confidence            346688999999999999999999999999999999997432       235788999999999999888     99999


Q ss_pred             eeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC----cEEe
Q 024661          161 WFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE----YVKV  235 (264)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~----~v~l  235 (264)
                      +|.+.+.+||||||+ +|+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++    .+||
T Consensus        81 ~~~~~~~~~iv~E~~~gg~L~~~i~~~~--~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl  158 (293)
T d1jksa_          81 VYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI  158 (293)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEE
T ss_pred             EEEECCEEEEEEEcCCCccccchhcccc--ccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEe
Confidence            999999999999999 899999998765  799999999999999999999999999999999999999776    5999


Q ss_pred             ccCCCCCcCCC-----CcccceeeeeceeEee
Q 024661          236 PDYKVPSPRHA-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       236 ~Dfg~a~~~~~-----~~~~~~~y~ape~~~~  262 (264)
                      +|||+|.....     ...+|..|||||++.+
T Consensus       159 ~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~  190 (293)
T d1jksa_         159 IDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNY  190 (293)
T ss_dssp             CCCTTCEECTTSCBCSCCCCCGGGCCHHHHTT
T ss_pred             cchhhhhhcCCCccccccCCCCcccCHHHHcC
Confidence            99999976432     3357889999998753

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=3.1e-40  Score=268.99  Aligned_cols=165  Identities=26%  Similarity=0.476  Sum_probs=148.7

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----------hhHHHHHHHHHHHHHHh-ccCCCCcceEEEc
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----------KYREAAMIEIDVLQRLA-RHDIGGTRCVQIR  159 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----------~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~  159 (264)
                      .++|++.+.||+|+||+||+|++..+|+.||+|++.+..          ...+.+.+|+.+++.+. |+|+     ++++
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnI-----v~~~   76 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNI-----IQLK   76 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTB-----CCEE
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCe-----EEEE
Confidence            578999999999999999999999999999999987432          23456889999999997 8887     9999


Q ss_pred             eeeeeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccC
Q 024661          160 NWFDYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY  238 (264)
Q Consensus       160 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Df  238 (264)
                      +++.+++.+||||||+ +|+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus        77 ~~~~~~~~~~ivmE~~~~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DF  154 (277)
T d1phka_          77 DTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDF  154 (277)
T ss_dssp             EEEECSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCC
T ss_pred             eecccCcceEEEEEcCCCchHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccc
Confidence            9999999999999999 899999998765  7999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcCCC-----CcccceeeeeceeEee
Q 024661          239 KVPSPRHA-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       239 g~a~~~~~-----~~~~~~~y~ape~~~~  262 (264)
                      |+|.....     ...||..|+|||++++
T Consensus       155 G~a~~~~~~~~~~~~~gt~~y~~PE~~~~  183 (277)
T d1phka_         155 GFSCQLDPGEKLREVCGTPSYLAPEIIEC  183 (277)
T ss_dssp             TTCEECCTTCCBCCCCSCGGGCCHHHHHH
T ss_pred             hheeEccCCCceeeeeccCCCCCHHHhhc
Confidence            99976433     2357889999998764

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=1.1e-40  Score=280.32  Aligned_cols=166  Identities=23%  Similarity=0.385  Sum_probs=147.6

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      +.++|++++.||+|+||.||+|.++.+|+.||+|++++.. .....+.+|+.+++.++|+|+     ++++++|.+++.+
T Consensus        27 ~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnI-----v~~~~~~~~~~~~  101 (352)
T d1koba_          27 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL-----INLHDAFEDKYEM  101 (352)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTB-----CCEEEEEECSSEE
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCC-----CcEEEEEEECCEE
Confidence            3467999999999999999999999999999999997543 345677899999999999888     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEee--cCCcEEeccCCCCCcCC
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV--SAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~--~~~~v~l~Dfg~a~~~~  245 (264)
                      ||||||+ +|+|.+++.... ..+++..++.|+.||+.||+|||++||+||||||+|||++  .++++||+|||+|....
T Consensus       102 ~ivmE~~~gg~L~~~~~~~~-~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~  180 (352)
T d1koba_         102 VLILEFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN  180 (352)
T ss_dssp             EEEEECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred             EEEEEcCCCChHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecC
Confidence            9999999 999999876543 4699999999999999999999999999999999999998  56899999999998754


Q ss_pred             CC-----cccceeeeeceeEe
Q 024661          246 AF-----SFQTFLSMASRVYI  261 (264)
Q Consensus       246 ~~-----~~~~~~y~ape~~~  261 (264)
                      ..     ..+|..|||||++.
T Consensus       181 ~~~~~~~~~gt~~y~aPE~~~  201 (352)
T d1koba_         181 PDEIVKVTTATAEFAAPEIVD  201 (352)
T ss_dssp             TTSCEEEECSSGGGCCHHHHT
T ss_pred             CCCceeeccCcccccCHHHHc
Confidence            32     35888999999864

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1e-40  Score=280.35  Aligned_cols=164  Identities=24%  Similarity=0.398  Sum_probs=149.5

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~  167 (264)
                      ++|++++.||+|+||.||+|+++.+|+.||||++.+..    ...+.+.+|+.+++.++|+|+     +++++++.+...
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnI-----v~~~~~~~~~~~  115 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL-----VKLEFSFKDNSN  115 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTB-----CCEEEEEECSSE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcE-----eecccccccccc
Confidence            57999999999999999999999999999999997532    334678899999999999888     999999999999


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA  246 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~  246 (264)
                      +++||||+ +|+|.+++....  .+++..++.|+.||+.||.|||++||+||||||+|||++.+|++||+|||+|+....
T Consensus       116 ~~~v~e~~~~g~l~~~l~~~~--~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~  193 (350)
T d1rdqe_         116 LYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG  193 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             cccccccccccchhhhHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeeccc
Confidence            99999999 999999998876  799999999999999999999999999999999999999999999999999986543


Q ss_pred             ---CcccceeeeeceeEee
Q 024661          247 ---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~~  262 (264)
                         ...||+.|||||++.+
T Consensus       194 ~~~~~~Gt~~Y~APE~~~~  212 (350)
T d1rdqe_         194 RTWTLCGTPEALAPEIILS  212 (350)
T ss_dssp             CBCCCEECGGGCCHHHHTT
T ss_pred             ccccccCccccCCHHHHcC
Confidence               3458999999998754

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-40  Score=274.44  Aligned_cols=167  Identities=20%  Similarity=0.356  Sum_probs=149.7

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      .+.++|++++.||+|+||+||+|.++.+++.||+|++++.......+.+|+++++.++|+|+     ++++++|.+++.+
T Consensus         2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnI-----v~~~~~~~~~~~~   76 (321)
T d1tkia_           2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNI-----LHLHESFESMEEL   76 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTB-----CCEEEEEEETTEE
T ss_pred             CCccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCC-----CeEEEEEEECCEE
Confidence            35678999999999999999999999999999999998776666778899999999999988     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC--CcEEeccCCCCCcCC
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA--EYVKVPDYKVPSPRH  245 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~--~~v~l~Dfg~a~~~~  245 (264)
                      |+||||| |++|.+++.... ..+++..++.|+.||+.||+|||++||+||||||+|||++.+  .++||+|||++....
T Consensus        77 ~lvmE~~~gg~L~~~i~~~~-~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~  155 (321)
T d1tkia_          77 VMIFEFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK  155 (321)
T ss_dssp             EEEECCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred             EEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccc
Confidence            9999999 899999997654 369999999999999999999999999999999999999855  489999999998654


Q ss_pred             CC-----cccceeeeeceeEe
Q 024661          246 AF-----SFQTFLSMASRVYI  261 (264)
Q Consensus       246 ~~-----~~~~~~y~ape~~~  261 (264)
                      ..     ..+|+.|||||++.
T Consensus       156 ~~~~~~~~~~t~~y~ape~~~  176 (321)
T d1tkia_         156 PGDNFRLLFTAPEYYAPEVHQ  176 (321)
T ss_dssp             TTCEEEEEESCGGGSCHHHHT
T ss_pred             cCCcccccccccccccchhcc
Confidence            32     24778899999754

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-41  Score=272.38  Aligned_cols=165  Identities=20%  Similarity=0.281  Sum_probs=136.3

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee--CC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY--RN  166 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~--~~  166 (264)
                      ++|++++.||+|+||+||+|+++.+|+.||+|+++..   ....+.+.+|+++++.++|+|+     +++++++.+  .+
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnI-----v~~~~~~~~~~~~   78 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI-----VRYYDRIIDRTNT   78 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTB-----CCEEEEEEC----
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCE-----eeEEEEEEeCCCC
Confidence            5799999999999999999999999999999998743   3445678899999999999888     999998865  46


Q ss_pred             EEEEEEecC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCC-----CeecCCCCCCEEeecCCcEEeccC
Q 024661          167 HICIVFEKL-GPSLYDFLRKN--SYRSFPIDLVRELGRQLLESVAFMHELR-----LIHTDLKPENILLVSAEYVKVPDY  238 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~-----ivH~dikp~Nili~~~~~v~l~Df  238 (264)
                      .+|+||||+ +|+|.+++.+.  ....+++..++.++.||+.||+|||++|     |+||||||+|||++.++.+||+||
T Consensus        79 ~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DF  158 (269)
T d2java1          79 TLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF  158 (269)
T ss_dssp             CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCH
T ss_pred             EEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeec
Confidence            789999999 89999998742  2347999999999999999999999876     999999999999999999999999


Q ss_pred             CCCCcCCC------CcccceeeeeceeEe
Q 024661          239 KVPSPRHA------FSFQTFLSMASRVYI  261 (264)
Q Consensus       239 g~a~~~~~------~~~~~~~y~ape~~~  261 (264)
                      |+|+....      ...||+.|||||++.
T Consensus       159 G~a~~~~~~~~~~~~~~gt~~Y~APE~l~  187 (269)
T d2java1         159 GLARILNHDTSFAKAFVGTPYYMSPEQMN  187 (269)
T ss_dssp             HHHHHC-----------CCCSCCCHHHHT
T ss_pred             cceeecccCCCccccCCCCcccCCHHHHc
Confidence            99975332      345899999999864

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-40  Score=267.62  Aligned_cols=163  Identities=25%  Similarity=0.338  Sum_probs=140.3

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      ++|++.++||+|+||.||+|.+. +++.||||+++......+.+.+|+++++.++|+|+     +++++++.+++.+|+|
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnI-----v~~~g~~~~~~~~~lv   78 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKL-----VQLYGVCLEQAPICLV   78 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTB-----CCEEEEECSSSSCEEE
T ss_pred             HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCc-----ccccceeccCCceEEE
Confidence            56999999999999999999986 46789999998766667889999999999999988     9999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC----
Q 024661          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA----  246 (264)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~----  246 (264)
                      |||+ +|+|.+++.... ..+++..++.++.||+.||+|||+++|+||||||+|||++.++++||+|||+|+....    
T Consensus        79 ~E~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~  157 (263)
T d1sm2a_          79 FEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT  157 (263)
T ss_dssp             EECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC-----------
T ss_pred             EEecCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCCce
Confidence            9999 999999987654 4689999999999999999999999999999999999999999999999999976432    


Q ss_pred             ---CcccceeeeeceeEe
Q 024661          247 ---FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~  261 (264)
                         ...+|..|||||++.
T Consensus       158 ~~~~~~gt~~y~aPE~l~  175 (263)
T d1sm2a_         158 SSTGTKFPVKWASPEVFS  175 (263)
T ss_dssp             -------CTTSCCHHHHT
T ss_pred             eecceecCcccCChHHhc
Confidence               234677899999864

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.2e-39  Score=275.26  Aligned_cols=163  Identities=22%  Similarity=0.291  Sum_probs=140.9

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHHHH---hccCCCCcceEEEceeeee
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQRL---ARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l---~~~~~~~~~~~~~~~~~~~  164 (264)
                      ++|++.+.||+|+||.||+|+++.+|+.||+|++.+..    .....+.+|...++.+   .|+|+     ++++++|.+
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnI-----v~l~~~~~~   78 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI-----VCMSYAFHT   78 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTB-----CCEEEEEEC
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcE-----EEEEEEEEE
Confidence            56999999999999999999999999999999997432    2233445554444444   45555     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      .+.+|+||||+ +|+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+.
T Consensus        79 ~~~~~ivmE~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~  156 (364)
T d1omwa3          79 PDKLSFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACD  156 (364)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEE
T ss_pred             CCEEEEEEEecCCCcHHHHHHhcc--cccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeee
Confidence            99999999999 999999998875  789999999999999999999999999999999999999999999999999976


Q ss_pred             CCC----CcccceeeeeceeEe
Q 024661          244 RHA----FSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~----~~~~~~~y~ape~~~  261 (264)
                      ...    ...||+.|||||++.
T Consensus       157 ~~~~~~~~~~GT~~y~APE~~~  178 (364)
T d1omwa3         157 FSKKKPHASVGTHGYMAPEVLQ  178 (364)
T ss_dssp             CSSSCCCSCCSCGGGCCHHHHS
T ss_pred             cCCCcccccccccccchhHHhh
Confidence            433    346899999999875

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-39  Score=267.85  Aligned_cols=164  Identities=20%  Similarity=0.292  Sum_probs=144.9

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh----hhHHHHHHHHHHHH-HHhccCCCCcceEEEceeeeeCC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN----KYREAAMIEIDVLQ-RLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~-~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      ++|++++.||+|+||+||+|+++.+++.||||++++..    ...+.+..|..++. .++|+|+     +++++++.+++
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~I-----v~~~~~~~~~~   76 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFL-----THMFCTFQTKE   76 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTB-----CCEEEEEECSS
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcE-----EEEEEEEccCC
Confidence            56999999999999999999999999999999997532    33455667777665 5788887     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      .+|+||||+ +|+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+|+...
T Consensus        77 ~~yivmEy~~~g~L~~~i~~~~--~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~  154 (320)
T d1xjda_          77 NLFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENM  154 (320)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred             ceeEEEeecCCCcHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhcc
Confidence            999999999 999999998776  79999999999999999999999999999999999999999999999999997532


Q ss_pred             ------CCcccceeeeeceeEee
Q 024661          246 ------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ------~~~~~~~~y~ape~~~~  262 (264)
                            ....||..|||||++.+
T Consensus       155 ~~~~~~~~~~gt~~y~aPE~~~~  177 (320)
T d1xjda_         155 LGDAKTNTFCGTPDYIAPEILLG  177 (320)
T ss_dssp             CTTCCBCCCCSCGGGCCHHHHTT
T ss_pred             cccccccccCCCCCcCCHHHHcC
Confidence                  23468999999998754

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-40  Score=267.05  Aligned_cols=164  Identities=23%  Similarity=0.343  Sum_probs=143.5

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      .++|++.++||+|+||.||+|.++ ++..||||+++......+.+.+|++++++++|+|+     +++++++.+ +.+|+
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnI-----v~~~g~~~~-~~~~i   84 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRL-----VRLYAVVTQ-EPIYI   84 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTB-----CCEEEEECS-SSCEE
T ss_pred             HHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCE-----eEEEeeecc-CCeEE
Confidence            367999999999999999999975 56789999998766667889999999999999988     999997754 56799


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---  246 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---  246 (264)
                      ||||+ +|+|.+++.......+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+|+....   
T Consensus        85 v~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~  164 (272)
T d1qpca_          85 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY  164 (272)
T ss_dssp             EEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred             EEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEccCCcc
Confidence            99999 99999987654434699999999999999999999999999999999999999999999999999976432   


Q ss_pred             ----CcccceeeeeceeEe
Q 024661          247 ----FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ----~~~~~~~y~ape~~~  261 (264)
                          ...+|..|||||++.
T Consensus       165 ~~~~~~~gt~~y~APE~~~  183 (272)
T d1qpca_         165 TAREGAKFPIKWTAPEAIN  183 (272)
T ss_dssp             ECCTTCCCCTTTSCHHHHH
T ss_pred             ccccccCCcccccChHHHh
Confidence                234677899999764

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-39  Score=268.88  Aligned_cols=165  Identities=28%  Similarity=0.478  Sum_probs=146.0

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh---hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN---KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ++|+++++||+|+||+||+|.+..+|+.||+|+++...   ...+.+.+|+++++.++|+|+     +++++++.+.+.+
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~I-----v~~~~~~~~~~~~   76 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI-----VKLLDVIHTENKL   76 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTB-----CCEEEEEEETTEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcE-----EEeccccccccce
Confidence            57999999999999999999999999999999996432   235678899999999999888     9999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC---
Q 024661          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH---  245 (264)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~---  245 (264)
                      |+||||+++++.+++.......+++..++.++.||+.||+|||++|||||||||+|||++.++++||+|||+|....   
T Consensus        77 ~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~  156 (298)
T d1gz8a_          77 YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV  156 (298)
T ss_dssp             EEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred             eEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCCc
Confidence            99999998888888776655679999999999999999999999999999999999999999999999999986532   


Q ss_pred             ---CCcccceeeeeceeEe
Q 024661          246 ---AFSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ---~~~~~~~~y~ape~~~  261 (264)
                         ....+|..|+|||++.
T Consensus       157 ~~~~~~~gt~~y~apE~~~  175 (298)
T d1gz8a_         157 RTYTHEVVTLWYRAPEILL  175 (298)
T ss_dssp             BCTTCCBCCCTTCCHHHHT
T ss_pred             ccceeecccceeeehhhhc
Confidence               2336889999999754

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.9e-39  Score=263.75  Aligned_cols=168  Identities=22%  Similarity=0.250  Sum_probs=143.6

Q ss_pred             CccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech----hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeee
Q 024661           88 ENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~  163 (264)
                      ..+.++|++.+.||+|+||.||+|++..+|+.||||++++.    ....+.+.+|+++++.++|+|+     +++++++.
T Consensus         3 ~~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpni-----v~~~~~~~   77 (277)
T d1o6ya_           3 SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAI-----VAVYDTGE   77 (277)
T ss_dssp             SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTB-----CCEEEEEE
T ss_pred             cCccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCC-----Ccccceee
Confidence            35678999999999999999999999999999999999743    2345678899999999999988     99999887


Q ss_pred             eCC----EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccC
Q 024661          164 YRN----HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY  238 (264)
Q Consensus       164 ~~~----~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Df  238 (264)
                      +.+    .+|+||||+ |++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+||
T Consensus        78 ~~~~~~~~~~lvmE~~~g~~L~~~~~~~~--~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~  155 (277)
T d1o6ya_          78 AETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDF  155 (277)
T ss_dssp             EECSSSEEEEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCC
T ss_pred             eccCCCceEEEEEECCCCCEehhhhcccC--CCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehh
Confidence            643    589999999 899999998776  7999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcCC---------CCcccceeeeeceeEee
Q 024661          239 KVPSPRH---------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       239 g~a~~~~---------~~~~~~~~y~ape~~~~  262 (264)
                      |.+....         ....||..|||||++.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~  188 (277)
T d1o6ya_         156 GIARAIADSGNSVTQTAAVIGTAQYLSPEQARG  188 (277)
T ss_dssp             TTCEECC----------------TTCCHHHHTT
T ss_pred             hhhhhhccccccccccccccCcccccCHHHHcC
Confidence            9876422         23358999999998753

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-39  Score=267.89  Aligned_cols=165  Identities=24%  Similarity=0.408  Sum_probs=141.8

Q ss_pred             ccCCCeEEEe-ecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeee--
Q 024661           89 NLTPRYRILS-KMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDY--  164 (264)
Q Consensus        89 ~~~~~y~~~~-~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~--  164 (264)
                      .+.++|.+.. .||+|+||+||+|++..+++.||||++++.    ..+.+|+.++.++ +|+|+     ++++++|++  
T Consensus         8 ~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~----~~~~~E~~~~~~~~~hpnI-----v~l~~~~~~~~   78 (335)
T d2ozaa1           8 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHI-----VRIVDVYENLY   78 (335)
T ss_dssp             CGGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTB-----CCEEEEEEEEE
T ss_pred             CcccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc----HHHHHHHHHHHHhcCCCCC-----CeEEEEEeecc
Confidence            3446799875 599999999999999999999999999754    3466789887665 67777     999999876  


Q ss_pred             --CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec---CCcEEeccC
Q 024661          165 --RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS---AEYVKVPDY  238 (264)
Q Consensus       165 --~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~---~~~v~l~Df  238 (264)
                        +..+|+||||| ||+|.+++.+.....+++..++.|+.||+.||+|||++||+||||||+|||++.   ++.+||+||
T Consensus        79 ~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DF  158 (335)
T d2ozaa1          79 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDF  158 (335)
T ss_dssp             TTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCC
T ss_pred             cCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccccccccccc
Confidence              57799999999 899999998765567999999999999999999999999999999999999986   467999999


Q ss_pred             CCCCcCC-----CCcccceeeeeceeEee
Q 024661          239 KVPSPRH-----AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       239 g~a~~~~-----~~~~~~~~y~ape~~~~  262 (264)
                      |+|+...     ....||+.|||||++.+
T Consensus       159 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~  187 (335)
T d2ozaa1         159 GFAKETTSHNSLTTPCYTPYYVAPEVLGP  187 (335)
T ss_dssp             TTCEECCCCCCCCCCSCCCSSCCCCCCCG
T ss_pred             ceeeeccCCCccccccCCcccCCcHHHcC
Confidence            9997533     24468999999998764

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-39  Score=264.15  Aligned_cols=162  Identities=24%  Similarity=0.332  Sum_probs=138.7

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEec---hhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRS---INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      -.++|++.+.||+|+||.||+|+..   ..||||+++.   .....+.+.+|+.+++.++|+|+     +++++++. ++
T Consensus         6 ~~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnI-----v~~~~~~~-~~   76 (276)
T d1uwha_           6 PDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI-----LLFMGYST-AP   76 (276)
T ss_dssp             CTTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTB-----CCEEEEEC-SS
T ss_pred             ccccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCE-----eeeeEEEe-cc
Confidence            3467999999999999999999864   3599999863   23456788999999999999988     89988764 46


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      .+|+||||+ +|+|.+++.... ..+++..+..++.||+.||+|||++|||||||||+|||++.++.+||+|||+|+...
T Consensus        77 ~~~lv~Ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~  155 (276)
T d1uwha_          77 QLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS  155 (276)
T ss_dssp             SCEEEEECCCEEEHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC--
T ss_pred             EEEEEEecCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeecc
Confidence            789999999 899999998654 369999999999999999999999999999999999999999999999999997643


Q ss_pred             C--------CcccceeeeeceeEe
Q 024661          246 A--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ~--------~~~~~~~y~ape~~~  261 (264)
                      .        ...+|..|||||++.
T Consensus       156 ~~~~~~~~~~~~gt~~y~APE~l~  179 (276)
T d1uwha_         156 RWSGSHQFEQLSGSILWMAPEVIR  179 (276)
T ss_dssp             ----------CCCCGGGCCHHHHT
T ss_pred             ccCCcccccccccCcccCCHHHHh
Confidence            2        235788999999874

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.2e-39  Score=265.94  Aligned_cols=165  Identities=21%  Similarity=0.306  Sum_probs=135.4

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCc---EEEEEEEec--hhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKE---LVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~---~vaiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .++|++.+.||+|+||+||+|.++.+++   .||||.+..  .....+.+.+|+++++.++|+|+     +++++++.+.
T Consensus        25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnI-----v~l~g~~~~~   99 (299)
T d1jpaa_          25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV-----IHLEGVVTKS   99 (299)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTB-----CCEEEEECSS
T ss_pred             hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCC-----ccEEEEEeeC
Confidence            3679999999999999999999987664   588888764  23455688999999999999988     9999999999


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      +.+|+||||+ +|+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++++||+|||+|+..
T Consensus       100 ~~~~iv~Ey~~~g~L~~~~~~~~-~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~  178 (299)
T d1jpaa_         100 TPVMIITEFMENGSLDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL  178 (299)
T ss_dssp             SSCEEEEECCTTEEHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred             CEEEEEEEecCCCcceeeecccc-CCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEc
Confidence            9999999999 999999888654 36999999999999999999999999999999999999999999999999999764


Q ss_pred             CCC-----------cccceeeeeceeEe
Q 024661          245 HAF-----------SFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~~~-----------~~~~~~y~ape~~~  261 (264)
                      ...           ..+|..|||||++.
T Consensus       179 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~  206 (299)
T d1jpaa_         179 EDDTSDPTYTSALGGKIPIRWTAPEAIQ  206 (299)
T ss_dssp             -----------------CGGGSCHHHHH
T ss_pred             cCCCCcceeeecccccCCccccCHHHHh
Confidence            321           13567899999764

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-39  Score=262.70  Aligned_cols=165  Identities=22%  Similarity=0.349  Sum_probs=143.1

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-------hhHHHHHHHHHHHHHHh--ccCCCCcceEEEce
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-------KYREAAMIEIDVLQRLA--RHDIGGTRCVQIRN  160 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~e~~~l~~l~--~~~~~~~~~~~~~~  160 (264)
                      +.++|++.+.||+|+||+||+|++..+|+.||||++++..       .....+.+|+.+++.++  |+|+     +++++
T Consensus         2 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nI-----v~~~~   76 (273)
T d1xwsa_           2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV-----IRLLD   76 (273)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSB-----CCEEE
T ss_pred             CCCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCc-----cEEEE
Confidence            3578999999999999999999999999999999987532       11234567999999997  5555     99999


Q ss_pred             eeeeCCEEEEEEecC-C-CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecC-CcEEecc
Q 024661          161 WFDYRNHICIVFEKL-G-PSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSA-EYVKVPD  237 (264)
Q Consensus       161 ~~~~~~~~~lv~e~~-~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~-~~v~l~D  237 (264)
                      ++.+.+..|+|||++ + +++.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.+ +.+||+|
T Consensus        77 ~~~~~~~~~lv~e~~~~~~~l~~~~~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~D  154 (273)
T d1xwsa_          77 WFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLID  154 (273)
T ss_dssp             EEECSSEEEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECC
T ss_pred             EEeeCCeEEEEEEeccCcchHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECc
Confidence            999999999999999 4 58888888765  79999999999999999999999999999999999999954 7999999


Q ss_pred             CCCCCcCCC----CcccceeeeeceeEe
Q 024661          238 YKVPSPRHA----FSFQTFLSMASRVYI  261 (264)
Q Consensus       238 fg~a~~~~~----~~~~~~~y~ape~~~  261 (264)
                      ||+|+....    ...||..|||||++.
T Consensus       155 FG~a~~~~~~~~~~~~GT~~y~aPE~~~  182 (273)
T d1xwsa_         155 FGSGALLKDTVYTDFDGTRVYSPPEWIR  182 (273)
T ss_dssp             CTTCEECCSSCBCCCCSCGGGSCHHHHH
T ss_pred             cccceecccccccccccCCCcCCHHHHc
Confidence            999975432    345899999999865

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-38  Score=257.40  Aligned_cols=163  Identities=21%  Similarity=0.288  Sum_probs=145.7

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      ++|+++++||+|+||+||+|+++ +++.||||++++.....+.+.+|+.+++.++|+|+     +++++++.+++.+++|
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnI-----v~~~g~~~~~~~~~iv   77 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKL-----VQLYGVCTKQRPIFII   77 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTB-----CCEEEEECCSSSEEEE
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCce-----eeEEEEEeeCCceEEE
Confidence            46899999999999999999985 67889999998777777889999999999999888     9999999999999999


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCCC---
Q 024661          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHAF---  247 (264)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~~---  247 (264)
                      |||+ +|+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|+.....   
T Consensus        78 ~Ey~~~g~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~  156 (258)
T d1k2pa_          78 TEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT  156 (258)
T ss_dssp             EECCTTEEHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCC
T ss_pred             EEccCCCcHHHhhhccc-cCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCCce
Confidence            9999 899999977554 36899999999999999999999999999999999999999999999999999754322   


Q ss_pred             ----cccceeeeeceeEe
Q 024661          248 ----SFQTFLSMASRVYI  261 (264)
Q Consensus       248 ----~~~~~~y~ape~~~  261 (264)
                          ..+|..|||||++.
T Consensus       157 ~~~~~~~t~~y~aPE~~~  174 (258)
T d1k2pa_         157 SSVGSKFPVRWSPPEVLM  174 (258)
T ss_dssp             CCCCSCCCGGGCCHHHHH
T ss_pred             eecccCCCCCcCCcHHhc
Confidence                24677899999864

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-38  Score=264.61  Aligned_cols=165  Identities=21%  Similarity=0.316  Sum_probs=140.3

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCc-----EEEEEEEech--hhhHHHHHHHHHHHHHH-hccCCCCcceEEEceeee
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKE-----LVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~-----~vaiK~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~  163 (264)
                      ++|++.++||+|+||+||+|++..+++     .||+|.+...  ......+.+|+.+++.+ +|+|+     +++++++.
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnI-----v~l~~~~~  111 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI-----VNLLGACT  111 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTB-----CCEEEEEC
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcE-----eEEEEEEe
Confidence            679999999999999999999876543     6899988643  34456788999999998 78887     99999999


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhcCC---------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKNSY---------------------RSFPIDLVRELGRQLLESVAFMHELRLIHTDLK  221 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~~---------------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dik  221 (264)
                      +.+.+|+||||+ +|+|.+++.....                     ..+++..++.|+.||+.||+|||++||+|||||
T Consensus       112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlK  191 (325)
T d1rjba_         112 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLA  191 (325)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCS
T ss_pred             eCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCc
Confidence            999999999999 9999999976431                     248999999999999999999999999999999


Q ss_pred             CCCEEeecCCcEEeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          222 PENILLVSAEYVKVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       222 p~Nili~~~~~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      |+|||++.++++||+|||+|+....        ...+|..|||||++.
T Consensus       192 p~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~  239 (325)
T d1rjba_         192 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLF  239 (325)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHH
T ss_pred             hhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHc
Confidence            9999999999999999999976432        223578899999764

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-39  Score=261.76  Aligned_cols=163  Identities=25%  Similarity=0.317  Sum_probs=141.1

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIV  171 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv  171 (264)
                      ++|++.+.||+|+||.||+|++..+ ..||||+++......+.+.+|+.+++.++|+|+     +++++++.+ +.+|+|
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nI-----v~~~g~~~~-~~~~lv   89 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKL-----VQLYAVVSE-EPIYIV   89 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTB-----CCEEEEECS-SSCEEE
T ss_pred             HHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccCCHHHHHHHHHHHHhcccCCE-----eEEEEEEec-CCeEEE
Confidence            6799999999999999999998765 569999998776667889999999999999988     999999854 567899


Q ss_pred             EecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC----
Q 024661          172 FEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA----  246 (264)
Q Consensus       172 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~----  246 (264)
                      |||+ +|+|.+++.......+++..++.++.||+.||+|||++||+||||||+||||+.++++||+|||+|+....    
T Consensus        90 ~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~  169 (285)
T d1fmka3          90 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT  169 (285)
T ss_dssp             ECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------
T ss_pred             EEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhccCCCce
Confidence            9999 89999998765444799999999999999999999999999999999999999999999999999976432    


Q ss_pred             ---CcccceeeeeceeEe
Q 024661          247 ---FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~  261 (264)
                         ...+|..|||||++.
T Consensus       170 ~~~~~~gt~~y~aPE~~~  187 (285)
T d1fmka3         170 ARQGAKFPIKWTAPEAAL  187 (285)
T ss_dssp             ------CCGGGSCHHHHH
T ss_pred             eeccccccccccChHHHh
Confidence               234778899999764

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-38  Score=257.28  Aligned_cols=163  Identities=25%  Similarity=0.342  Sum_probs=138.5

Q ss_pred             CCeEEEe-ecccCccEEEEEEEeCCC--CcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           92 PRYRILS-KMGEGTFGQVVECFDNEK--KELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        92 ~~y~~~~-~lg~G~~g~V~~~~~~~~--~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      ++|.+.+ +||+|+||.||+|.++.+  +..||||+++..  ....+.+.+|++++++++|+|+     +++++++.+ +
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnI-----v~l~g~~~~-~   81 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYI-----VRLIGVCQA-E   81 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEEES-S
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCE-----eeEeeeecc-C
Confidence            5688888 499999999999987643  557999998743  3456788999999999999988     999998865 4


Q ss_pred             EEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH  245 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~  245 (264)
                      .+|+||||+ +|+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+...
T Consensus        82 ~~~lvmE~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~  160 (285)
T d1u59a_          82 ALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALG  160 (285)
T ss_dssp             SEEEEEECCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred             eEEEEEEeCCCCcHHHHhhccc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhccc
Confidence            689999999 899999986543 469999999999999999999999999999999999999999999999999997533


Q ss_pred             C---------CcccceeeeeceeEe
Q 024661          246 A---------FSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ~---------~~~~~~~y~ape~~~  261 (264)
                      .         ...+|..|||||++.
T Consensus       161 ~~~~~~~~~~~~~gt~~y~aPE~~~  185 (285)
T d1u59a_         161 ADDSYYTARSAGKWPLKWYAPECIN  185 (285)
T ss_dssp             TCSCEECCCCSSCCCGGGCCHHHHH
T ss_pred             ccccccccccccccCccccChHHHh
Confidence            2         224678899999753

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-38  Score=264.82  Aligned_cols=165  Identities=22%  Similarity=0.357  Sum_probs=141.3

Q ss_pred             cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC
Q 024661           90 LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      +.++|+++++||+|+||+||+|.++.+|+.||||++++.   ....+.+.+|+++++.++|+|+     ++++++|...+
T Consensus        16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpni-----v~l~~~~~~~~   90 (346)
T d1cm8a_          16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV-----IGLLDVFTPDE   90 (346)
T ss_dssp             CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTB-----CCCSEEECSCS
T ss_pred             cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCe-----eEEEEEeccCc
Confidence            678999999999999999999999999999999999743   3445678899999999999988     99999987654


Q ss_pred             ------EEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCC
Q 024661          167 ------HICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV  240 (264)
Q Consensus       167 ------~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~  240 (264)
                            ++|+||||++.+|..++...   .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+
T Consensus        91 ~~~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~  167 (346)
T d1cm8a_          91 TLDDFTDFYLVMPFMGTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGL  167 (346)
T ss_dssp             STTTCCCCEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             cccccceEEEEEecccccHHHHHHhc---cccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccc
Confidence                  57999999988898887654   599999999999999999999999999999999999999999999999999


Q ss_pred             CCcCCC---CcccceeeeeceeEee
Q 024661          241 PSPRHA---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       241 a~~~~~---~~~~~~~y~ape~~~~  262 (264)
                      |+....   ...+|..|||||++.+
T Consensus       168 a~~~~~~~~~~~~t~~y~aPE~~~~  192 (346)
T d1cm8a_         168 ARQADSEMTGYVVTRWYRAPEVILN  192 (346)
T ss_dssp             CEECCSSCCSSCSCGGGCCTHHHHT
T ss_pred             eeccCCccccccccccccCHHHHcC
Confidence            987543   4458999999998754

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-38  Score=257.20  Aligned_cols=165  Identities=20%  Similarity=0.281  Sum_probs=138.3

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCC----cEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKK----ELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~----~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      .+.|++.+.||+|+||.||+|.++.++    ..||||.++..  ......+.+|+.+++.++|+|+     +++++++.+
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nI-----v~~~g~~~~   80 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI-----IRLEGVISK   80 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTB-----CCEEEEECS
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCE-----eeeeEEEec
Confidence            356999999999999999999987654    46999998643  3445678899999999999988     999999999


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      .+..++||||+ ++++.+++.... ..+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+|+.
T Consensus        81 ~~~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~  159 (283)
T d1mqba_          81 YKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRV  159 (283)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred             CCceEEEEEecccCcchhhhhccc-ccccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhc
Confidence            99999999999 888988887654 4699999999999999999999999999999999999999999999999999976


Q ss_pred             CCCC---------cccceeeeeceeEe
Q 024661          244 RHAF---------SFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~~~---------~~~~~~y~ape~~~  261 (264)
                      ....         ..+|..|||||++.
T Consensus       160 ~~~~~~~~~~~~~~~gt~~Y~APE~l~  186 (283)
T d1mqba_         160 LEDDPEATYTTSGGKIPIRWTAPEAIS  186 (283)
T ss_dssp             --------------CCCGGGSCHHHHH
T ss_pred             ccCCCccceEeccCCCCccccCHHHHc
Confidence            4321         23577899999764

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-39  Score=264.53  Aligned_cols=160  Identities=24%  Similarity=0.406  Sum_probs=135.2

Q ss_pred             EEeecccCccEEEEEEEeCCCCcEEEEEEEechhh------hHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           96 ILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINK------YREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        96 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      .+++||+|+||+||+|+++.+|+.||||+++....      ..+.+.+|+.+++.++|+|+     +++++++.+++.+|
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnI-----v~~~~~~~~~~~~~   76 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNI-----IGLLDAFGHKSNIS   76 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTB-----CCEEEEECCTTCCE
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCE-----eEEEeeeccCCcee
Confidence            46789999999999999999999999999874322      23467899999999999988     99999999999999


Q ss_pred             EEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---
Q 024661          170 IVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---  246 (264)
Q Consensus       170 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---  246 (264)
                      +||||+.+++...+.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|.....   
T Consensus        77 ivmE~~~~~~~~~~~~~~-~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~  155 (299)
T d1ua2a_          77 LVFDFMETDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR  155 (299)
T ss_dssp             EEEECCSEEHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC
T ss_pred             ehhhhhcchHHhhhhhcc-cCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCCcc
Confidence            999999544444444332 4699999999999999999999999999999999999999999999999999976432   


Q ss_pred             ---CcccceeeeeceeEe
Q 024661          247 ---FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ---~~~~~~~y~ape~~~  261 (264)
                         ...+|..|||||++.
T Consensus       156 ~~~~~~gt~~y~aPE~~~  173 (299)
T d1ua2a_         156 AYTHQVVTRWYRAPELLF  173 (299)
T ss_dssp             CCCCSCCCCTTCCHHHHT
T ss_pred             cccceecChhhccHHHHc
Confidence               335899999999864

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.4e-38  Score=254.44  Aligned_cols=156  Identities=23%  Similarity=0.355  Sum_probs=133.5

Q ss_pred             eecccCccEEEEEEEeC--CCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEE
Q 024661           98 SKMGEGTFGQVVECFDN--EKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVF  172 (264)
Q Consensus        98 ~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~  172 (264)
                      ++||+|+||.||+|.+.  .+++.||||+++..   ....+.+.+|++++++++|+|+     +++++++.+ +..||||
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnI-----v~~~g~~~~-~~~~lvm   86 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI-----VRMIGICEA-ESWMLVM   86 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTB-----CCEEEEEES-SSEEEEE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCC-----ceEEEEecc-CCEEEEE
Confidence            46999999999999864  45678999998643   2345678999999999999988     999999865 4578999


Q ss_pred             ecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-----
Q 024661          173 EKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-----  246 (264)
Q Consensus       173 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-----  246 (264)
                      ||+ +|+|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+....     
T Consensus        87 E~~~~g~L~~~l~~~~--~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~  164 (277)
T d1xbba_          87 EMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY  164 (277)
T ss_dssp             ECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEE
T ss_pred             EcCCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhcccccccc
Confidence            999 899999998765  799999999999999999999999999999999999999999999999999975332     


Q ss_pred             ----CcccceeeeeceeEe
Q 024661          247 ----FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ----~~~~~~~y~ape~~~  261 (264)
                          ...+|..|||||++.
T Consensus       165 ~~~~~~~gt~~y~APE~l~  183 (277)
T d1xbba_         165 KAQTHGKWPVKWYAPECIN  183 (277)
T ss_dssp             EC----CCCGGGCCHHHHH
T ss_pred             ccccccCCCceecCchhhc
Confidence                224677899999763

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-37  Score=260.32  Aligned_cols=164  Identities=27%  Similarity=0.473  Sum_probs=139.6

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC-
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR-  165 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~-  165 (264)
                      .++++|+++++||+|+||+||+|.++.+|+.||||++++.  ....+.+.+|+++++.++|+++     +++++++... 
T Consensus         5 ~i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~i-----v~~~~~~~~~~   79 (345)
T d1pmea_           5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI-----IGINDIIRAPT   79 (345)
T ss_dssp             CCCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTB-----CCCCEEECCSS
T ss_pred             CcCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCC-----CcEEEEEeecc
Confidence            3557899999999999999999999999999999999743  3445678899999999999988     8888887654 


Q ss_pred             ----CEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCC
Q 024661          166 ----NHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVP  241 (264)
Q Consensus       166 ----~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a  241 (264)
                          ..+|+++++++++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|
T Consensus        80 ~~~~~~~~l~~~~~~g~L~~~l~~~---~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a  156 (345)
T d1pmea_          80 IEQMKDVYLVTHLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA  156 (345)
T ss_dssp             TTTCCCEEEEEECCCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             ccccceEEEEEeecCCchhhhhhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCce
Confidence                346777776699999999865   5999999999999999999999999999999999999999999999999999


Q ss_pred             CcCC---------CCcccceeeeeceeE
Q 024661          242 SPRH---------AFSFQTFLSMASRVY  260 (264)
Q Consensus       242 ~~~~---------~~~~~~~~y~ape~~  260 (264)
                      ....         ....+|..|+|||++
T Consensus       157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l  184 (345)
T d1pmea_         157 RVADPDHDHTGFLTEYVATRWYRAPEIM  184 (345)
T ss_dssp             EECCGGGCBCCTTCCCCSCGGGCCGGGT
T ss_pred             eeccCCCccceeeccccccceechHHHh
Confidence            6532         233578899999986

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=4.3e-37  Score=252.64  Aligned_cols=167  Identities=26%  Similarity=0.304  Sum_probs=144.1

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhcc-CCCCcceEEEceeeeeCCE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARH-DIGGTRCVQIRNWFDYRNH  167 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~-~~~~~~~~~~~~~~~~~~~  167 (264)
                      .++++|+++++||+|+||+||+|++..+|+.||+|++.... ....+.+|++.++.+.|+ ++     +.+++++.....
T Consensus         2 vig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~e~~~~~~l~~~~~i-----~~~~~~~~~~~~   75 (293)
T d1csna_           2 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGI-----PNVYYFGQEGLH   75 (293)
T ss_dssp             EETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTC-----CCEEEEEEETTE
T ss_pred             CCCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc-CcHHHHHHHHHHHHhcCCCCC-----CEEEEEeecCCc
Confidence            45789999999999999999999999999999999886532 334567899999999874 44     788899999999


Q ss_pred             EEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec-----CCcEEeccCCCCC
Q 024661          168 ICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS-----AEYVKVPDYKVPS  242 (264)
Q Consensus       168 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~-----~~~v~l~Dfg~a~  242 (264)
                      .|+|||+++++|.+++.... ..+++..+..++.|++.||+|||++||+||||||+|||++.     ++.+||+|||+|+
T Consensus        76 ~~~vme~~~~~l~~~~~~~~-~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~  154 (293)
T d1csna_          76 NVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK  154 (293)
T ss_dssp             EEEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred             cEEEEEecCCCHHHHHHhhc-cchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeE
Confidence            99999999999999987654 46999999999999999999999999999999999999974     5789999999997


Q ss_pred             cCC-------------CCcccceeeeeceeEee
Q 024661          243 PRH-------------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       243 ~~~-------------~~~~~~~~y~ape~~~~  262 (264)
                      ...             ....||+.|||||++.+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~  187 (293)
T d1csna_         155 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLG  187 (293)
T ss_dssp             ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT
T ss_pred             EcccCccccceeecccCceEEchhhcCHHHhcC
Confidence            532             12358999999998654

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-37  Score=250.15  Aligned_cols=164  Identities=23%  Similarity=0.289  Sum_probs=133.4

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCC---cEEEEEEEec--hhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKK---ELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~---~~vaiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      .++|++++.||+|+||.||+|.+..++   ..||+|.++.  .....+.+.+|+.+++.++|+|+     +++++++. +
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnI-----v~l~~~~~-~   79 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI-----VKLIGVIT-E   79 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTB-----CCEEEEEC-S
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEe-c
Confidence            368999999999999999999986553   4688888763  23446778999999999999888     99999886 5


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      +.+|+||||+ +|+|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+|+..
T Consensus        80 ~~~~iv~E~~~~g~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~  158 (273)
T d1mp8a_          80 NPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM  158 (273)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------
T ss_pred             CeEEEEEEeccCCcHHhhhhccC-CCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheec
Confidence            6789999999 899999887654 46899999999999999999999999999999999999999999999999999764


Q ss_pred             CC-------CcccceeeeeceeEe
Q 024661          245 HA-------FSFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~~-------~~~~~~~y~ape~~~  261 (264)
                      ..       ...+|..|||||++.
T Consensus       159 ~~~~~~~~~~~~gt~~y~apE~l~  182 (273)
T d1mp8a_         159 EDSTYYKASKGKLPIKWMAPESIN  182 (273)
T ss_dssp             ------------CCGGGCCHHHHH
T ss_pred             cCCcceeccceecCcccchhhHhc
Confidence            32       224678899999864

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-37  Score=253.78  Aligned_cols=163  Identities=19%  Similarity=0.281  Sum_probs=135.5

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCc----EEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKE----LVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYR  165 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~----~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~  165 (264)
                      ++|+++++||+|+||+||+|.+..+|+    .||+|.++..  ....+.+.+|+.+++.++|+|+     +++++++.++
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnI-----v~l~g~~~~~   83 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHV-----CRLLGICLTS   83 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTB-----CCEEEEEESS
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCE-----eeEEEEEecC
Confidence            459999999999999999999988876    4788877532  3446788999999999999988     9999999875


Q ss_pred             CEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          166 NHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       166 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      + .+++||++ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++++||+|||+|+..
T Consensus        84 ~-~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~  161 (317)
T d1xkka_          84 T-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL  161 (317)
T ss_dssp             S-EEEEEECCTTCBHHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHT
T ss_pred             C-eeEEEEeccCCcccccccccc-cCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceec
Confidence            4 56677777 999999888654 47999999999999999999999999999999999999999999999999998753


Q ss_pred             CC--------CcccceeeeeceeEe
Q 024661          245 HA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       245 ~~--------~~~~~~~y~ape~~~  261 (264)
                      ..        ...+|..|||||++.
T Consensus       162 ~~~~~~~~~~~~~gt~~y~APE~l~  186 (317)
T d1xkka_         162 GAEEKEYHAEGGKVPIKWMALESIL  186 (317)
T ss_dssp             TTTCC--------CCTTTSCHHHHH
T ss_pred             ccccccccccccccCccccChHHHh
Confidence            22        123678899999764

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-36  Score=251.55  Aligned_cols=167  Identities=26%  Similarity=0.465  Sum_probs=138.3

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCC-CcEEEEEEEech---hhhHHHHHHHHHHHHHH---hccCCCCcceEEEceeee
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEK-KELVAIKIVRSI---NKYREAAMIEIDVLQRL---ARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l---~~~~~~~~~~~~~~~~~~  163 (264)
                      .++|+++++||+|+||+||+|++..+ ++.||||+++..   ......+.+|+.+++.+   +|+|+     ++++++|.
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnI-----v~~~~~~~   80 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV-----VRLFDVCT   80 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTB-----CCEEEEEE
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCc-----ceeeeeec
Confidence            47899999999999999999999766 677999998643   22234566788888877   46666     99998885


Q ss_pred             e-----CCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccC
Q 024661          164 Y-----RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDY  238 (264)
Q Consensus       164 ~-----~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Df  238 (264)
                      .     ...+|++||++.+++..+........+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus        81 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~df  160 (305)
T d1blxa_          81 VSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADF  160 (305)
T ss_dssp             EEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred             ccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecch
Confidence            3     46789999999666665555555567999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcCC-----CCcccceeeeeceeEee
Q 024661          239 KVPSPRH-----AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       239 g~a~~~~-----~~~~~~~~y~ape~~~~  262 (264)
                      |++....     ....||..|||||++.+
T Consensus       161 g~~~~~~~~~~~~~~~gT~~Y~APE~~~~  189 (305)
T d1blxa_         161 GLARIYSFQMALTSVVVTLWYRAPEVLLQ  189 (305)
T ss_dssp             CSCCCCCGGGGGCCCCCCCTTCCHHHHTT
T ss_pred             hhhhhhcccccCCCcccChhhcCcchhcC
Confidence            9987643     24468999999998643

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.4e-36  Score=250.44  Aligned_cols=168  Identities=26%  Similarity=0.308  Sum_probs=142.2

Q ss_pred             ccCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           89 NLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        89 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      .++++|++.+.||+|+||.||+|++..+|+.||||++.... ..+.+..|+++++.+.|+++    ++.+..++.+.+..
T Consensus         4 ~vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~i~~~l~~~~~----i~~~~~~~~~~~~~   78 (299)
T d1ckia_           4 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVG----IPTIRWCGAEGDYN   78 (299)
T ss_dssp             EETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT-TSCCHHHHHHHHHHSTTSTT----CCCEEEEEEETTEE
T ss_pred             eECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc-cCHHHHHHHHHHHHccCCCc----ccEEEEEEecCCEE
Confidence            35578999999999999999999999999999999987543 23457889999999988764    35666777888999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeec---CCcEEeccCCCCCcCC
Q 024661          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVS---AEYVKVPDYKVPSPRH  245 (264)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~---~~~v~l~Dfg~a~~~~  245 (264)
                      ++||||++++|.+.+.... ..+++..+..++.|++.||+|||++||+||||||+|||++.   +..++|+|||+|+...
T Consensus        79 ~ivme~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~  157 (299)
T d1ckia_          79 VMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  157 (299)
T ss_dssp             EEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECB
T ss_pred             EEEEEEcCCchhhhhhhcc-CCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceecc
Confidence            9999999989888876544 47999999999999999999999999999999999999864   4579999999997532


Q ss_pred             C-------------CcccceeeeeceeEee
Q 024661          246 A-------------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~-------------~~~~~~~y~ape~~~~  262 (264)
                      .             ...||..|||||++.+
T Consensus       158 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  187 (299)
T d1ckia_         158 DARTHQHIPYRENKNLTGTARYASINTHLG  187 (299)
T ss_dssp             CTTTCCBCCCCBCCSCCCCSSSCCHHHHTT
T ss_pred             ccccccceeccccCCcCCCccccCHHHHhC
Confidence            1             2358999999998654

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-36  Score=255.05  Aligned_cols=173  Identities=23%  Similarity=0.342  Sum_probs=142.2

Q ss_pred             ceEEeeCC-c--cCCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcc
Q 024661           81 HYVFAIGE-N--LTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTR  154 (264)
Q Consensus        81 ~~~~~~~~-~--~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~  154 (264)
                      .+++.+|+ .  +.++|+++++||+|+||+||+|.++.+|+.||||++.+.   ......+.+|+.+++.++|+|+    
T Consensus         3 ~~~~~~~~~~f~i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnI----   78 (355)
T d2b1pa1           3 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI----   78 (355)
T ss_dssp             EEEEEETTEEEEEETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTB----
T ss_pred             CEEEEeCCcceeecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCe----
Confidence            46788888 3  347899999999999999999999999999999999753   3445678899999999999888    


Q ss_pred             eEEEceeeee------CCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEee
Q 024661          155 CVQIRNWFDY------RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLV  228 (264)
Q Consensus       155 ~~~~~~~~~~------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~  228 (264)
                       ++++++|..      ...+|+||||+.+++.+.+.    ..+++..++.++.||+.||+|||++||+||||||+|||++
T Consensus        79 -v~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~----~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~  153 (355)
T d2b1pa1          79 -ISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK  153 (355)
T ss_dssp             -CCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred             -eEEEEEEecccccccCceeEEEEeccchHHHHhhh----cCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccc
Confidence             999999854      47899999999777777664    2689999999999999999999999999999999999999


Q ss_pred             cCCcEEeccCCCCCcCCC-----CcccceeeeeceeEee
Q 024661          229 SAEYVKVPDYKVPSPRHA-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       229 ~~~~v~l~Dfg~a~~~~~-----~~~~~~~y~ape~~~~  262 (264)
                      .++.++++|||+++....     ...+|..|+|||++++
T Consensus       154 ~~~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~  192 (355)
T d2b1pa1         154 SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG  192 (355)
T ss_dssp             TTCCEEECCCCC---------------CCTTCCHHHHTT
T ss_pred             cccceeeechhhhhccccccccccccccccccChhhhcC
Confidence            999999999999876433     3358889999998754

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-36  Score=249.88  Aligned_cols=167  Identities=22%  Similarity=0.283  Sum_probs=130.5

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCC-----CCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeee
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~  163 (264)
                      .++|++.++||+|+||.||+|.+..     +++.||+|+++..  ....+.+.+|..++.++.|+    ++++.+++++.
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h----~~iv~~~~~~~   87 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH----LNVVNLLGACT   87 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCC----TTBCCEEEEEC
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCC----CeEEEeeeeec
Confidence            3679999999999999999999754     3468999998743  34456778888888888654    23378877765


Q ss_pred             e-CCEEEEEEecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEe
Q 024661          164 Y-RNHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILL  227 (264)
Q Consensus       164 ~-~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili  227 (264)
                      . +..+++||||+ +|+|.+++....              ...+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus        88 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl  167 (299)
T d1ywna1          88 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL  167 (299)
T ss_dssp             STTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             cCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeE
Confidence            5 56789999999 999999997542              1348999999999999999999999999999999999999


Q ss_pred             ecCCcEEeccCCCCCcCC--------CCcccceeeeeceeEe
Q 024661          228 VSAEYVKVPDYKVPSPRH--------AFSFQTFLSMASRVYI  261 (264)
Q Consensus       228 ~~~~~v~l~Dfg~a~~~~--------~~~~~~~~y~ape~~~  261 (264)
                      +.++++||+|||+|+...        ....||..|||||++.
T Consensus       168 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~  209 (299)
T d1ywna1         168 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIF  209 (299)
T ss_dssp             CGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHH
T ss_pred             CCCCcEEEccCcchhhccccccccccCceeeCccccchhHhh
Confidence            999999999999997532        1235888999999764

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.5e-37  Score=253.35  Aligned_cols=163  Identities=27%  Similarity=0.442  Sum_probs=140.0

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ++|+++++||+|+||+||+|+++ +|+.||||+++..   ....+.+.+|+.+++.++|+|+     +++++++.+.+..
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnI-----v~~~~~~~~~~~~   75 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI-----VKLYDVIHTKKRL   75 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTB-----CCEEEEEECSSCE
T ss_pred             CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcE-----EeeeeecccCCce
Confidence            68999999999999999999985 7789999999753   2335788899999999999888     9999999999999


Q ss_pred             EEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCC---
Q 024661          169 CIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRH---  245 (264)
Q Consensus       169 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~---  245 (264)
                      |++||++++++...+.... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|....   
T Consensus        76 ~i~~e~~~~~~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~  154 (286)
T d1ob3a_          76 VLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV  154 (286)
T ss_dssp             EEEEECCSEEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred             eEEEEeehhhhHHHHHhhc-CCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccCc
Confidence            9999999666555555433 479999999999999999999999999999999999999999999999999986532   


Q ss_pred             ---CCcccceeeeeceeEe
Q 024661          246 ---AFSFQTFLSMASRVYI  261 (264)
Q Consensus       246 ---~~~~~~~~y~ape~~~  261 (264)
                         ....++..|++||++.
T Consensus       155 ~~~~~~~~~~~y~~pE~~~  173 (286)
T d1ob3a_         155 RKYTHEIVTLWYRAPDVLM  173 (286)
T ss_dssp             -------CCCTTCCHHHHT
T ss_pred             cccceecccchhhhHHHHh
Confidence               2334778899999865

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=8.2e-37  Score=255.00  Aligned_cols=160  Identities=18%  Similarity=0.389  Sum_probs=138.2

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHh-ccCCCCcceEEEceeeee--CCE
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLA-RHDIGGTRCVQIRNWFDY--RNH  167 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~--~~~  167 (264)
                      .++|+++++||+|+||+||+|+++.+|+.||||+++...  .+.+.+|+++++.+. |+|+     ++++++|..  ...
T Consensus        34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~Ei~il~~l~~hpnI-----v~~~~~~~~~~~~~  106 (328)
T d3bqca1          34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK--KKKIKREIKILENLRGGPNI-----ITLADIVKDPVSRT  106 (328)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC--HHHHHHHHHHHHHHTTSTTB-----CCEEEEEECTTTCS
T ss_pred             CcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH--HHHHHHHHHHHHhccCCCCC-----cEEEEEEEecCCCc
Confidence            368999999999999999999999999999999987533  467889999999996 7777     999999875  467


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC-cEEeccCCCCCcCC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE-YVKVPDYKVPSPRH  245 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~-~v~l~Dfg~a~~~~  245 (264)
                      +++||||+ +++|.++.     ..+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+|+...
T Consensus       107 ~~~v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~  181 (328)
T d3bqca1         107 PALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH  181 (328)
T ss_dssp             EEEEEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECC
T ss_pred             eeEEEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceecc
Confidence            99999999 78876542     3699999999999999999999999999999999999999765 69999999997543


Q ss_pred             C-----CcccceeeeeceeEee
Q 024661          246 A-----FSFQTFLSMASRVYIC  262 (264)
Q Consensus       246 ~-----~~~~~~~y~ape~~~~  262 (264)
                      .     ...+|..|+|||++.+
T Consensus       182 ~~~~~~~~~~t~~y~aPE~~~~  203 (328)
T d3bqca1         182 PGQEYNVRVASRYFKGPELLVD  203 (328)
T ss_dssp             TTCCCCSCCSCGGGCCHHHHTT
T ss_pred             CCCcccccccCccccCcccccC
Confidence            2     3357889999998653

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.1e-37  Score=257.11  Aligned_cols=161  Identities=24%  Similarity=0.396  Sum_probs=135.9

Q ss_pred             CeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee------CC
Q 024661           93 RYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY------RN  166 (264)
Q Consensus        93 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~------~~  166 (264)
                      +|+.+++||+|+||+||+|++..+|+.||||++.+....   ..+|++++++++|+|+     ++++++|..      ..
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~---~~~Ei~il~~l~h~ni-----v~~~~~~~~~~~~~~~~   92 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF---KNRELQIMRKLDHCNI-----VRLRYFFYSSGEKKDEV   92 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS---CCHHHHHHHHCCCTTB-----CCEEEEEEEC--CCSCC
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH---HHHHHHHHHhcCCCCC-----CcEEEEEEecCccCCce
Confidence            599999999999999999999999999999999765432   3469999999999888     888888744      34


Q ss_pred             EEEEEEecCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC-cEEeccCCCCCc
Q 024661          167 HICIVFEKLGPSLYDFLRK--NSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE-YVKVPDYKVPSP  243 (264)
Q Consensus       167 ~~~lv~e~~~~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~-~v~l~Dfg~a~~  243 (264)
                      ++|+||||+++++.+.+..  .....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||++..
T Consensus        93 ~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~  172 (350)
T d1q5ka_          93 YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ  172 (350)
T ss_dssp             EEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEE
T ss_pred             EEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhh
Confidence            6899999997666655542  2334799999999999999999999999999999999999999775 899999999975


Q ss_pred             CC-----CCcccceeeeeceeEe
Q 024661          244 RH-----AFSFQTFLSMASRVYI  261 (264)
Q Consensus       244 ~~-----~~~~~~~~y~ape~~~  261 (264)
                      ..     ....++..|+|||++.
T Consensus       173 ~~~~~~~~~~~gt~~y~aPE~~~  195 (350)
T d1q5ka_         173 LVRGEPNVSYICSRYYRAPELIF  195 (350)
T ss_dssp             CCTTSCCCSCCSCTTSCCHHHHT
T ss_pred             ccCCcccccccccccccChHHhh
Confidence            32     2346888999999765

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-36  Score=251.46  Aligned_cols=165  Identities=22%  Similarity=0.394  Sum_probs=137.6

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee----
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY----  164 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~----  164 (264)
                      ++|+++++||+|+||+||+|+++.+|+.||||++...   ......+.+|+.+++.++|+|+     +++++.+..    
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~ni-----i~~~~~~~~~~~~   84 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV-----VNLIEICRTKASP   84 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTB-----CCEEEEEEC----
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCc-----cceEeeeeccccc
Confidence            7899999999999999999999999999999998643   2345678899999999999988     777777644    


Q ss_pred             ----CCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCC
Q 024661          165 ----RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKV  240 (264)
Q Consensus       165 ----~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~  240 (264)
                          ++.+|+|||++.+.+........ ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus        85 ~~~~~~~~~iv~e~~~~~~~~~~~~~~-~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~  163 (318)
T d3blha1          85 YNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL  163 (318)
T ss_dssp             ------CEEEEEECCCEEHHHHHTCTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTT
T ss_pred             ccccCceEEEEEeccCCCccchhhhcc-cccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecce
Confidence                45689999999666665554332 4799999999999999999999999999999999999999999999999999


Q ss_pred             CCcCC----------CCcccceeeeeceeEee
Q 024661          241 PSPRH----------AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       241 a~~~~----------~~~~~~~~y~ape~~~~  262 (264)
                      +....          ....+|..|+|||++.+
T Consensus       164 ~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~  195 (318)
T d3blha1         164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLG  195 (318)
T ss_dssp             CEECCC-----CCCCCSCCSCGGGCCHHHHTT
T ss_pred             eeecccccccccccccceecCHHHhhHHHHcC
Confidence            96432          22358899999998753

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.7e-36  Score=250.08  Aligned_cols=167  Identities=20%  Similarity=0.307  Sum_probs=143.3

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCC-----CCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeee
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~  163 (264)
                      .++|++.++||+|+||+||+|+++.     +++.||||+++..  ....+.+.+|+++++.++|+|+     +.+++++.
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~ni-----v~~~~~~~   86 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNI-----VKLLGVCA   86 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTB-----CCEEEEEC
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCc-----ccceeeec
Confidence            4679999999999999999999753     4678999998743  3345778999999999999988     99999999


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhcC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKNS----------------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDL  220 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~~----------------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~di  220 (264)
                      +.+..+++||++ +|+|.+++....                      ...+++..++.|+.||+.||+|||+++||||||
T Consensus        87 ~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDl  166 (301)
T d1lufa_          87 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDL  166 (301)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEE
Confidence            999999999999 999999997532                      124889999999999999999999999999999


Q ss_pred             CCCCEEeecCCcEEeccCCCCCcCCC--------CcccceeeeeceeEee
Q 024661          221 KPENILLVSAEYVKVPDYKVPSPRHA--------FSFQTFLSMASRVYIC  262 (264)
Q Consensus       221 kp~Nili~~~~~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~~  262 (264)
                      ||+|||++.++++||+|||+|+....        ...++..|||||.+..
T Consensus       167 Kp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  216 (301)
T d1lufa_         167 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFY  216 (301)
T ss_dssp             SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHH
T ss_pred             cccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHcc
Confidence            99999999999999999999864321        2346778999998653

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-37  Score=247.74  Aligned_cols=162  Identities=21%  Similarity=0.306  Sum_probs=134.6

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee-CCEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-RNHICI  170 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~-~~~~~l  170 (264)
                      ++|++.+.||+|+||.||+|.++  |..||+|++++. ...+.+.+|++++++++|+|+     +++++++.+ .+.+|+
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~-~~~~~~~~E~~~l~~l~HpnI-----v~~~g~~~~~~~~~~l   78 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-ATAQAFLAEASVMTQLRHSNL-----VQLLGVIVEEKGGLYI   78 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCC-C--HHHHHTHHHHTTCCCTTB-----CCEEEEECCC--CCEE
T ss_pred             HHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcH-HHHHHHHHHHHHHHhCCCCCE-----eeEEEEEEecCCcEEE
Confidence            56999999999999999999985  678999999754 345678999999999999888     999998854 567899


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC---
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA---  246 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~---  246 (264)
                      ||||+ +|+|.+++.......+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++....   
T Consensus        79 v~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~  158 (262)
T d1byga_          79 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD  158 (262)
T ss_dssp             EECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred             EEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecCCCCc
Confidence            99999 99999999765434589999999999999999999999999999999999999999999999999986443   


Q ss_pred             CcccceeeeeceeEe
Q 024661          247 FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ~~~~~~~y~ape~~~  261 (264)
                      ...++..|||||++.
T Consensus       159 ~~~~~~~y~aPE~l~  173 (262)
T d1byga_         159 TGKLPVKWTAPEALR  173 (262)
T ss_dssp             ---CCTTTSCHHHHH
T ss_pred             cccccccCCChHHHh
Confidence            334677899999764

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-36  Score=245.56  Aligned_cols=163  Identities=27%  Similarity=0.408  Sum_probs=143.9

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      ++|+++++||+|+||+||+|++..+++.||||+++..   ......+.+|+.+++.++|+|+     +++++++.+....
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~ni-----v~~~~~~~~~~~~   76 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI-----VRLHDVLHSDKKL   76 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTB-----CCEEEEEECSSEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCE-----Eeeccccccccce
Confidence            5899999999999999999999999999999999743   2456788999999999999887     9999999999999


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-  246 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-  246 (264)
                      +++||++ +++|..++....  .+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||.|..... 
T Consensus        77 ~iv~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~  154 (292)
T d1unla_          77 TLVFEFCDQDLKKYFDSCNG--DLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP  154 (292)
T ss_dssp             EEEEECCSEEHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSC
T ss_pred             eEEeeecccccccccccccc--ccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCC
Confidence            9999999 777777766554  789999999999999999999999999999999999999999999999999976432 


Q ss_pred             -----CcccceeeeeceeEe
Q 024661          247 -----FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 -----~~~~~~~y~ape~~~  261 (264)
                           ...++..|++||++.
T Consensus       155 ~~~~~~~~~~~~~~~pe~~~  174 (292)
T d1unla_         155 VRCYSAEVVTLWYRPPDVLF  174 (292)
T ss_dssp             CSCCCSCCSCGGGCCHHHHT
T ss_pred             CccceeeccccchhhhhHhc
Confidence                 223567789998754

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-36  Score=247.50  Aligned_cols=160  Identities=23%  Similarity=0.234  Sum_probs=133.4

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCC----E
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRN----H  167 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~----~  167 (264)
                      .+|.+.+.||+|+||.||+|++  +|+.||||+++...........|+..++.++|+|+     +++++++.+++    .
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnI-----v~~~~~~~~~~~~~~~   75 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENI-----LGFIAADNKDNGTWTQ   75 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTB-----CCEEEEEEEECSSSEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcC-----cceEEEEEeCCCcceE
Confidence            5699999999999999999986  48899999997654433333345555556677776     99999987643    6


Q ss_pred             EEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH--------CCCeecCCCCCCEEeecCCcEEeccC
Q 024661          168 ICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE--------LRLIHTDLKPENILLVSAEYVKVPDY  238 (264)
Q Consensus       168 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--------~~ivH~dikp~Nili~~~~~v~l~Df  238 (264)
                      +|+||||+ +|+|.+++++.   .+++..++.++.|++.||+|||+        +||+||||||+|||++.++++||+||
T Consensus        76 ~~lv~Ey~~~g~L~~~l~~~---~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DF  152 (303)
T d1vjya_          76 LWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL  152 (303)
T ss_dssp             EEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCC
T ss_pred             EEEEEecccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEec
Confidence            89999999 99999999875   58999999999999999999996        59999999999999999999999999


Q ss_pred             CCCCcCCC----------CcccceeeeeceeEe
Q 024661          239 KVPSPRHA----------FSFQTFLSMASRVYI  261 (264)
Q Consensus       239 g~a~~~~~----------~~~~~~~y~ape~~~  261 (264)
                      |++.....          ...||..|||||++.
T Consensus       153 Gl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  185 (303)
T d1vjya_         153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD  185 (303)
T ss_dssp             TTCEEEETTTTEECC----CCSCGGGCCHHHHT
T ss_pred             CccccccCCCcceeccccceecccCcCChhhcc
Confidence            99875321          235789999999864

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-36  Score=244.25  Aligned_cols=164  Identities=23%  Similarity=0.307  Sum_probs=132.3

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCC-C--cEEEEEEEech----hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEK-K--ELVAIKIVRSI----NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY  164 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~-~--~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~  164 (264)
                      ++|++.+.||+|+||.||+|++... +  ..||||++++.    ....+.+.+|+.+++.++|+|+     +++++++.+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nI-----v~~~g~~~~   82 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL-----IRLYGVVLT   82 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTB-----CCEEEEECS
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCE-----EEEEEEEee
Confidence            5699999999999999999986543 2  46899988642    3445678999999999999988     999999976


Q ss_pred             CCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          165 RNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       165 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                       +.+++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus        83 -~~~~lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~  160 (273)
T d1u46a_          83 -PPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA  160 (273)
T ss_dssp             -SSCEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred             -cchheeeeeecCcchhhhhhccc-CCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhh
Confidence             4678999999 899998887653 3699999999999999999999999999999999999999999999999999986


Q ss_pred             CCCC---------cccceeeeeceeEee
Q 024661          244 RHAF---------SFQTFLSMASRVYIC  262 (264)
Q Consensus       244 ~~~~---------~~~~~~y~ape~~~~  262 (264)
                      ....         ..++..|||||++.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~  188 (273)
T d1u46a_         161 LPQNDDHYVMQEHRKVPFAWCAPESLKT  188 (273)
T ss_dssp             CCC-CCEEEC-----CCGGGCCHHHHHH
T ss_pred             cccCCCcceecCccccCcccCCHHHHhC
Confidence            4322         235668999997653

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-36  Score=248.00  Aligned_cols=165  Identities=21%  Similarity=0.304  Sum_probs=140.1

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcE--EEEEEEech--hhhHHHHHHHHHHHHHH-hccCCCCcceEEEceeeeeCC
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKEL--VAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWFDYRN  166 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~--vaiK~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~~~  166 (264)
                      ++|++.++||+|+||.||+|+++.++..  ||||.++..  ....+.+.+|+++++.+ +|+|+     +++++++.+++
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnI-----v~~~~~~~~~~   84 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI-----INLLGACEHRG   84 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTB-----CCEEEEEEETT
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCE-----eeEEEEEecCC
Confidence            5799999999999999999999888764  667776532  33456789999999998 58887     99999999999


Q ss_pred             EEEEEEecC-CCCHHHHHHhc--------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCC
Q 024661          167 HICIVFEKL-GPSLYDFLRKN--------------SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAE  231 (264)
Q Consensus       167 ~~~lv~e~~-~~~L~~~l~~~--------------~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~  231 (264)
                      .+|+||||+ +|+|.+++...              ....+++..+..++.||+.||.|||+++|+||||||+|||++.++
T Consensus        85 ~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~  164 (309)
T d1fvra_          85 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY  164 (309)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG
T ss_pred             eeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCC
Confidence            999999999 99999999753              234799999999999999999999999999999999999999999


Q ss_pred             cEEeccCCCCCcCCC-----CcccceeeeeceeEe
Q 024661          232 YVKVPDYKVPSPRHA-----FSFQTFLSMASRVYI  261 (264)
Q Consensus       232 ~v~l~Dfg~a~~~~~-----~~~~~~~y~ape~~~  261 (264)
                      .+||+|||+|+....     ...+|..|+|||.+.
T Consensus       165 ~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~  199 (309)
T d1fvra_         165 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLN  199 (309)
T ss_dssp             CEEECCTTCEESSCEECCC----CCTTTCCHHHHH
T ss_pred             ceEEccccccccccccccccceecCCcccchHHhc
Confidence            999999999976432     334788899999763

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-35  Score=243.88  Aligned_cols=166  Identities=19%  Similarity=0.281  Sum_probs=138.0

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCC-------cEEEEEEEechh--hhHHHHHHHHHHHHHH-hccCCCCcceEEEce
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKK-------ELVAIKIVRSIN--KYREAAMIEIDVLQRL-ARHDIGGTRCVQIRN  160 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~-------~~vaiK~~~~~~--~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~  160 (264)
                      .++|++++.||+|+||.||+|++..++       ..||||++++..  .....+.+|...+.++ +|+|+     +++++
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnI-----v~~~~   86 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNI-----INLLG   86 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTB-----CCEEE
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeE-----Eeccc
Confidence            368999999999999999999986554       369999987533  4457788899999888 68777     99999


Q ss_pred             eeeeCCEEEEEEecC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 024661          161 WFDYRNHICIVFEKL-GPSLYDFLRKNS--------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENI  225 (264)
Q Consensus       161 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Ni  225 (264)
                      ++.+++.+|+||||+ +|+|.+++....              ...+++..++.++.||+.||+|||+++||||||||+||
T Consensus        87 ~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~Ni  166 (299)
T d1fgka_          87 ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV  166 (299)
T ss_dssp             EECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             ccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccce
Confidence            999999999999999 999999997543              23589999999999999999999999999999999999


Q ss_pred             EeecCCcEEeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          226 LLVSAEYVKVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       226 li~~~~~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      |++.++.+||+|||+++....        ...++..|||||.+.
T Consensus       167 Ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~  210 (299)
T d1fgka_         167 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF  210 (299)
T ss_dssp             EECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHH
T ss_pred             eecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhc
Confidence            999999999999999986432        235778899999764

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-36  Score=251.55  Aligned_cols=164  Identities=23%  Similarity=0.354  Sum_probs=137.0

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEech---hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee---
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI---NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY---  164 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~---  164 (264)
                      .++|+++++||+|+||+||+|+++.+|+.||||++++.   ....+.+.+|+++++.++|+|+     +++++++..   
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~i-----v~~~~~~~~~~~   91 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV-----IGLLDVFTPARS   91 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTB-----CCCSEEECSCSS
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCe-----eeEEEEEeeccc
Confidence            57899999999999999999999999999999999743   2345678899999999999988     888888754   


Q ss_pred             ---CCEEEEEEecCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCC
Q 024661          165 ---RNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVP  241 (264)
Q Consensus       165 ---~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a  241 (264)
                         ...+++++++.+++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++.++.+|++|||++
T Consensus        92 ~~~~~~~~i~~~~~gg~L~~~~~~~---~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a  168 (348)
T d2gfsa1          92 LEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA  168 (348)
T ss_dssp             TTTCCCCEEEEECCSEEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC---
T ss_pred             cccCceEEEEEeecCCchhhhcccc---cccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchh
Confidence               2345555554499999998653   6999999999999999999999999999999999999999999999999998


Q ss_pred             CcCCC---CcccceeeeeceeEee
Q 024661          242 SPRHA---FSFQTFLSMASRVYIC  262 (264)
Q Consensus       242 ~~~~~---~~~~~~~y~ape~~~~  262 (264)
                      .....   ...++..|+|||++.+
T Consensus       169 ~~~~~~~~~~~g~~~y~apE~~~~  192 (348)
T d2gfsa1         169 RHTDDEMTGYVATRWYRAPEIMLN  192 (348)
T ss_dssp             -CCTGGGSSSCHHHHTSCHHHHTT
T ss_pred             cccCcccccccccccccCchhhcC
Confidence            76443   3458889999997543

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-35  Score=244.25  Aligned_cols=166  Identities=25%  Similarity=0.319  Sum_probs=143.5

Q ss_pred             CCCeEEEeecccCccEEEEEEEeC-----CCCcEEEEEEEech--hhhHHHHHHHHHHHHHH-hccCCCCcceEEEceee
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDN-----EKKELVAIKIVRSI--NKYREAAMIEIDVLQRL-ARHDIGGTRCVQIRNWF  162 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~-----~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~  162 (264)
                      .++|++.++||+|+||.||+|++.     .+++.||||+++..  ......+.+|+.+++.+ +|+|+     +++++++
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnI-----v~~~g~~   96 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNI-----VNLLGAC   96 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTB-----CCEEEEE
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCE-----EEEEEEE
Confidence            368999999999999999999863     45678999999743  34556788999999999 57777     9999999


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHHhcC----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCE
Q 024661          163 DYRNHICIVFEKL-GPSLYDFLRKNS----------------YRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENI  225 (264)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~----------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Ni  225 (264)
                      .+...+|+||||+ +|+|.+++....                ...+++..+..++.||+.||+|||++|++||||||+||
T Consensus        97 ~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NI  176 (311)
T d1t46a_          97 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI  176 (311)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             eeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccc
Confidence            9999999999999 999999997543                12589999999999999999999999999999999999


Q ss_pred             EeecCCcEEeccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          226 LLVSAEYVKVPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       226 li~~~~~v~l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      |++.++.++|+|||+++....        ...+|+.|||||++.
T Consensus       177 l~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  220 (311)
T d1t46a_         177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF  220 (311)
T ss_dssp             EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHH
T ss_pred             cccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhc
Confidence            999999999999999986432        235678899999865

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-35  Score=247.12  Aligned_cols=163  Identities=23%  Similarity=0.346  Sum_probs=143.5

Q ss_pred             CCeEEEeecccCccEEEEEEEeC---CCCcEEEEEEEech-----hhhHHHHHHHHHHHHHHhcc-CCCCcceEEEceee
Q 024661           92 PRYRILSKMGEGTFGQVVECFDN---EKKELVAIKIVRSI-----NKYREAAMIEIDVLQRLARH-DIGGTRCVQIRNWF  162 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~-~~~~~~~~~~~~~~  162 (264)
                      ++|+++++||+|+||+||+|.+.   .+|+.||+|++++.     ....+.+.+|++++++++|+ |+     +++++++
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnI-----v~~~~~~   98 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL-----VTLHYAF   98 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTB-----CCEEEEE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeE-----EEeeeee
Confidence            67999999999999999999874   46899999998642     23456678899999999984 56     9999999


Q ss_pred             eeCCEEEEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCC
Q 024661          163 DYRNHICIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVP  241 (264)
Q Consensus       163 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a  241 (264)
                      .+...++++|||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|
T Consensus        99 ~~~~~~~~v~e~~~~~~L~~~i~~~~--~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a  176 (322)
T d1vzoa_          99 QTETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS  176 (322)
T ss_dssp             EETTEEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEE
T ss_pred             ccCCceeeeeecccccHHHHHHHhcc--cccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccch
Confidence            9999999999999 999999998876  7889999999999999999999999999999999999999999999999998


Q ss_pred             CcCCC-------CcccceeeeeceeEe
Q 024661          242 SPRHA-------FSFQTFLSMASRVYI  261 (264)
Q Consensus       242 ~~~~~-------~~~~~~~y~ape~~~  261 (264)
                      .....       ...++..|++||.+.
T Consensus       177 ~~~~~~~~~~~~~~~g~~~~~~pe~~~  203 (322)
T d1vzoa_         177 KEFVADETERAYDFCGTIEYMAPDIVR  203 (322)
T ss_dssp             EECCGGGGGGGCGGGSCCTTCCHHHHT
T ss_pred             hhhcccccccccccccccccchhHHhh
Confidence            65322       335788899999864

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-35  Score=243.37  Aligned_cols=166  Identities=17%  Similarity=0.283  Sum_probs=142.7

Q ss_pred             CCCeEEEeecccCccEEEEEEEeCC-----CCcEEEEEEEech--hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeee
Q 024661           91 TPRYRILSKMGEGTFGQVVECFDNE-----KKELVAIKIVRSI--NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFD  163 (264)
Q Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~~~~-----~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~  163 (264)
                      .++|++.+.||+|+||.||+|.+..     ++..||||++++.  ......+.+|+.++++++|+|+     +++++++.
T Consensus        19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nI-----v~~~~~~~   93 (308)
T d1p4oa_          19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHV-----VRLLGVVS   93 (308)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTB-----CCEEEEEC
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCE-----eeeeeEEe
Confidence            3789999999999999999998853     3568999999743  3344568899999999999988     99999999


Q ss_pred             eCCEEEEEEecC-CCCHHHHHHhc--------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEE
Q 024661          164 YRNHICIVFEKL-GPSLYDFLRKN--------SYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVK  234 (264)
Q Consensus       164 ~~~~~~lv~e~~-~~~L~~~l~~~--------~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~  234 (264)
                      .++..++||||+ +|+|.+++...        ....+++..+..++.|++.||.|||+++|+||||||+|||++.++++|
T Consensus        94 ~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~K  173 (308)
T d1p4oa_          94 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK  173 (308)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEE
T ss_pred             cCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEE
Confidence            999999999999 99999998743        113478999999999999999999999999999999999999999999


Q ss_pred             eccCCCCCcCCC--------CcccceeeeeceeEe
Q 024661          235 VPDYKVPSPRHA--------FSFQTFLSMASRVYI  261 (264)
Q Consensus       235 l~Dfg~a~~~~~--------~~~~~~~y~ape~~~  261 (264)
                      |+|||+|+....        ...+|..|||||.+.
T Consensus       174 l~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~  208 (308)
T d1p4oa_         174 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK  208 (308)
T ss_dssp             ECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHH
T ss_pred             EeecccceeccCCcceeeccceecccccCCHHHHc
Confidence            999999975432        224678899999753

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-34  Score=238.25  Aligned_cols=161  Identities=16%  Similarity=0.175  Sum_probs=136.2

Q ss_pred             EEEeecccCccEEEEEEEeCCCC---cEEEEEEEec--hhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeee-CCEE
Q 024661           95 RILSKMGEGTFGQVVECFDNEKK---ELVAIKIVRS--INKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDY-RNHI  168 (264)
Q Consensus        95 ~~~~~lg~G~~g~V~~~~~~~~~---~~vaiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~-~~~~  168 (264)
                      .+.++||+|+||+||+|++..++   ..||||.+++  .....+.+.+|++++++++|+|+     +++++++.. ++..
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnI-----v~~~g~~~~~~~~~  104 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV-----LSLLGICLRSEGSP  104 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTB-----CCCCEEEEETTTEE
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCE-----eEEeEEEEecCCce
Confidence            34678999999999999986643   3589999864  34456789999999999999888     999998765 5789


Q ss_pred             EEEEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcEEeccCCCCCcCCC-
Q 024661          169 CIVFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYVKVPDYKVPSPRHA-  246 (264)
Q Consensus       169 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~~~-  246 (264)
                      ++||||+ +++|.+++.... ..+++..++.++.|++.||.|||+.+|+||||||+|||+++++.+||+|||+++.... 
T Consensus       105 ~lv~E~~~~g~l~~~~~~~~-~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~  183 (311)
T d1r0pa_         105 LVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK  183 (311)
T ss_dssp             EEEEECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTT
T ss_pred             EEEEEEeecCchhhhhcccc-ccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhcccc
Confidence            9999999 899999988654 4678889999999999999999999999999999999999999999999999975332 


Q ss_pred             ---------CcccceeeeeceeEe
Q 024661          247 ---------FSFQTFLSMASRVYI  261 (264)
Q Consensus       247 ---------~~~~~~~y~ape~~~  261 (264)
                               ...+|..|+|||++.
T Consensus       184 ~~~~~~~~~~~~gt~~y~aPE~~~  207 (311)
T d1r0pa_         184 EFDSVHNKTGAKLPVKWMALESLQ  207 (311)
T ss_dssp             TCCCTTCTTCSSCCGGGSCHHHHH
T ss_pred             ccccceecccccccccccChHHHh
Confidence                     124678899999754

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.7e-33  Score=235.70  Aligned_cols=180  Identities=31%  Similarity=0.417  Sum_probs=150.1

Q ss_pred             EEeeCCccC-CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCC------Ccce
Q 024661           83 VFAIGENLT-PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIG------GTRC  155 (264)
Q Consensus        83 ~~~~~~~~~-~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~------~~~~  155 (264)
                      ++.+|+.+. +||+++++||+|+||+||+|+++.+|+.||||++++.....+...+|+.+++.+.|+++.      ++++
T Consensus         3 p~~~g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~i   82 (362)
T d1q8ya_           3 PAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHI   82 (362)
T ss_dssp             CCCTTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTB
T ss_pred             CCCCCCCccCCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCce
Confidence            355688776 579999999999999999999999999999999998777778889999999999987753      5678


Q ss_pred             EEEceeeee--CCEEEEEEecC--CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCCEEeecC
Q 024661          156 VQIRNWFDY--RNHICIVFEKL--GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-LRLIHTDLKPENILLVSA  230 (264)
Q Consensus       156 ~~~~~~~~~--~~~~~lv~e~~--~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivH~dikp~Nili~~~  230 (264)
                      +++++++..  ....+++|+++  +++............+++..++.++.||+.||+|||+ +||+||||||+|||++.+
T Consensus        83 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~  162 (362)
T d1q8ya_          83 LKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIV  162 (362)
T ss_dssp             CCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEE
T ss_pred             EEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeecc
Confidence            999988765  35666666666  5566666666555689999999999999999999998 899999999999999876


Q ss_pred             C------cEEeccCCCCCcCC---CCcccceeeeeceeEee
Q 024661          231 E------YVKVPDYKVPSPRH---AFSFQTFLSMASRVYIC  262 (264)
Q Consensus       231 ~------~v~l~Dfg~a~~~~---~~~~~~~~y~ape~~~~  262 (264)
                      +      .++|+|||.|....   ....+|..|+|||++.+
T Consensus       163 ~~~~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~  203 (362)
T d1q8ya_         163 DSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLG  203 (362)
T ss_dssp             ETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHT
T ss_pred             CcccccceeeEeecccccccccccccccccccccChhhccc
Confidence            5      49999999987533   34458899999998654

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.93  E-value=2.4e-26  Score=176.60  Aligned_cols=132  Identities=22%  Similarity=0.276  Sum_probs=100.9

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEech-------------------hhhHHHHHHHHHHHHHHhccCCCCcc
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSI-------------------NKYREAAMIEIDVLQRLARHDIGGTR  154 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-------------------~~~~~~~~~e~~~l~~l~~~~~~~~~  154 (264)
                      +.++++||+|+||.||+|.+. +|+.||||+++..                   ........+|...+.++.+.++    
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v----   76 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAV----   76 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSS----
T ss_pred             chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCc----
Confidence            568899999999999999974 6889999987521                   0112344567888888887766    


Q ss_pred             eEEEceeeeeCCEEEEEEecCCC-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCCEEeecCCcE
Q 024661          155 CVQIRNWFDYRNHICIVFEKLGP-SLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHELRLIHTDLKPENILLVSAEYV  233 (264)
Q Consensus       155 ~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~Nili~~~~~v  233 (264)
                       +..+++.    ..+++||++++ .+.         .+++..+..++.|++.+|.|||++||+||||||+|||++++ .+
T Consensus        77 -~~~~~~~----~~~lvme~~~~~~~~---------~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~-~~  141 (191)
T d1zara2          77 -PKVYAWE----GNAVLMELIDAKELY---------RVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEE-GI  141 (191)
T ss_dssp             -CCEEEEE----TTEEEEECCCCEEGG---------GCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETT-EE
T ss_pred             -ceEEEec----CCEEEEEeecccccc---------chhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCC-CE
Confidence             4444332    12799999944 332         24455567899999999999999999999999999999865 58


Q ss_pred             EeccCCCCCcCC
Q 024661          234 KVPDYKVPSPRH  245 (264)
Q Consensus       234 ~l~Dfg~a~~~~  245 (264)
                      +|+|||.|....
T Consensus       142 ~liDFG~a~~~~  153 (191)
T d1zara2         142 WIIDFPQSVEVG  153 (191)
T ss_dssp             EECCCTTCEETT
T ss_pred             EEEECCCcccCC
Confidence            999999997654

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.80  E-value=2.3e-08  Score=78.52  Aligned_cols=140  Identities=13%  Similarity=0.114  Sum_probs=90.8

Q ss_pred             CCeEEEeecccCccEEEEEEEeCCCCcEEEEEEEechh-hhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEE
Q 024661           92 PRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSIN-KYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICI  170 (264)
Q Consensus        92 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~l  170 (264)
                      ..|++.+..+.++.+.||+..  ..+..+.+|+..... .....+.+|...++.+... +.   +.+++.+..+.+..|+
T Consensus        14 ~~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~-vp---vP~vl~~~~~~~~~~l   87 (263)
T d1j7la_          14 EKYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGK-LP---VPKVLHFERHDGWSNL   87 (263)
T ss_dssp             TTSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTT-SC---CCCEEEEEEETTEEEE
T ss_pred             hceEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhcc-CC---CCcEEEEEecCCceEE
Confidence            457777766656667899885  345667888775432 2334567789998888642 22   3566677778889999


Q ss_pred             EEecC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-------------------------------------
Q 024661          171 VFEKL-GPSLYDFLRKNSYRSFPIDLVRELGRQLLESVAFMHE-------------------------------------  212 (264)
Q Consensus       171 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-------------------------------------  212 (264)
                      ||+++ |.++.+.....    ..   ...++.++...+..||+                                     
T Consensus        88 v~~~l~G~~~~~~~~~~----~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (263)
T d1j7la_          88 LMSEADGVLCSEEYEDE----QS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE  160 (263)
T ss_dssp             EEECCSSEEHHHHTTTC----SC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGST
T ss_pred             EEEeccccccccccccc----cc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccc
Confidence            99999 66665432111    11   11122333333333332                                     


Q ss_pred             ----------------C------CCeecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          213 ----------------L------RLIHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       213 ----------------~------~ivH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                                      .      .++|+|+.+.|||+++++.+.|+||+.+...
T Consensus       161 ~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~g  214 (263)
T d1j7la_         161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGRA  214 (263)
T ss_dssp             TCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred             cccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcccC
Confidence                            1      2789999999999997766779999988653

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=98.48  E-value=2.1e-07  Score=77.54  Aligned_cols=75  Identities=21%  Similarity=0.245  Sum_probs=47.1

Q ss_pred             EeecccCccEEEEEEEeCCCCcEEEEEEEech--------hhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEE
Q 024661           97 LSKMGEGTFGQVVECFDNEKKELVAIKIVRSI--------NKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHI  168 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  168 (264)
                      .+.||.|....||++.+..+++.+++|.-...        .....+...|.+.++.+....  ...+.+++.  .+....
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~--p~~vP~v~~--~d~~~~  106 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHV--PHLVPRVFY--SDTEMA  106 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTC--GGGSCCEEE--EETTTT
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhC--CCCcceEEE--EcCCCC
Confidence            45789999999999998877888999964321        122344567888888775431  112344443  344556


Q ss_pred             EEEEecC
Q 024661          169 CIVFEKL  175 (264)
Q Consensus       169 ~lv~e~~  175 (264)
                      ++|||++
T Consensus       107 ~lvmE~L  113 (392)
T d2pula1         107 VTVMEDL  113 (392)
T ss_dssp             EEEECCC
T ss_pred             EEEEecc
Confidence            7899999

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.36  E-value=4.5e-07  Score=70.53  Aligned_cols=134  Identities=16%  Similarity=0.124  Sum_probs=81.2

Q ss_pred             cEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEEEEEecC-CCCHHH--
Q 024661          105 FGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHICIVFEKL-GPSLYD--  181 (264)
Q Consensus       105 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~--  181 (264)
                      .+.||+... .++..+.+|......  ...+..|...++.+....+.   +.+++.+..+.+..++||+++ |.++.+  
T Consensus        24 ~~~v~r~~~-~~~~~~vlK~~~~~~--~~~l~~E~~~l~~L~~~gvp---vP~v~~~~~~~~~~~~v~~~i~G~~~~~~~   97 (255)
T d1nd4a_          24 DAAVFRLSA-QGRPVLFVKTDLSGA--LNELQDEAARLSWLATTGVP---CAAVLDVVTEAGRDWLLLGEVPGQDLLSSH   97 (255)
T ss_dssp             SCEEEEEEC-TTSCCEEEEEECSCT--TSCHHHHHHHHHHHHTTTCC---BCCEEEEEECSSCEEEEEECCSSEETTTSC
T ss_pred             CCeEEEEEe-CCCCEEEEEeCCccC--HhHHHHHHHHHHHHHhcCCC---CCceeeecccccceEEEEEeeecccccccc
Confidence            467898875 446668889765332  34567899999999887663   455566667778899999999 544321  


Q ss_pred             ------------HHHhc-----CCCCC--CHHHHHH-----H---------------HHHHHHHHHHHHHC-------CC
Q 024661          182 ------------FLRKN-----SYRSF--PIDLVRE-----L---------------GRQLLESVAFMHEL-------RL  215 (264)
Q Consensus       182 ------------~l~~~-----~~~~~--~~~~~~~-----i---------------~~qi~~~l~~lH~~-------~i  215 (264)
                                  .+.+-     ....+  .......     +               .......+..+...       .+
T Consensus        98 ~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l  177 (255)
T d1nd4a_          98 LAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVV  177 (255)
T ss_dssp             CCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEE
T ss_pred             ccHHHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHHHHHHHhCCccCCceE
Confidence                        11110     00000  0000000     0               00012223333332       37


Q ss_pred             eecCCCCCCEEeecCCcEEeccCCCCCcC
Q 024661          216 IHTDLKPENILLVSAEYVKVPDYKVPSPR  244 (264)
Q Consensus       216 vH~dikp~Nili~~~~~v~l~Dfg~a~~~  244 (264)
                      +|+|+.+.|||++.++.+.|+||+.+...
T Consensus       178 iHgD~~~~Nvl~~~~~~~~iID~~~~~~g  206 (255)
T d1nd4a_         178 THGDACLPNIMVENGRFSGFIDCGRLGVA  206 (255)
T ss_dssp             ECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred             EeCCCCCcceEEeCCceEEEEEchhcccC
Confidence            99999999999998777789999988653

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=98.20  E-value=3.1e-06  Score=68.39  Aligned_cols=70  Identities=16%  Similarity=0.222  Sum_probs=49.9

Q ss_pred             EEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEE--ceeeeeCCEEEEEEecCC
Q 024661          106 GQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQI--RNWFDYRNHICIVFEKLG  176 (264)
Q Consensus       106 g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~--~~~~~~~~~~~lv~e~~~  176 (264)
                      -.||++.. .+|..+++|+.+......+.+..|...+..|...++..+..+..  -..+..++..+.+++++.
T Consensus        36 N~vy~v~~-~dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~  107 (325)
T d1zyla1          36 NRVYQFQD-EDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG  107 (325)
T ss_dssp             SEEEEECC-TTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred             ceeEEEEc-CCCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecC
Confidence            57999875 46778999998765556677888999999999877643322222  123355778899999983

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.77  E-value=3.8e-05  Score=63.47  Aligned_cols=70  Identities=14%  Similarity=0.192  Sum_probs=48.0

Q ss_pred             EeecccCccEEEEEEEeCC-------CCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEceeeeeCCEEE
Q 024661           97 LSKMGEGTFGQVVECFDNE-------KKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRNWFDYRNHIC  169 (264)
Q Consensus        97 ~~~lg~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  169 (264)
                      ++.|+.|-.-.+|++....       ..+.|.+++.-.. .......+|..+++.+...++.    .++++++.+    +
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~-~~~idr~~E~~i~~~ls~~gl~----Pkll~~~~~----g  117 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLG----PKLYGIFSG----G  117 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSS----SCEEEEETT----E
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCc-chhhHHHHHHHHHHHHHhCCCC----CeEEEEcCC----c
Confidence            4578888888999998643       2456778876532 2233456799999999887763    345555543    6


Q ss_pred             EEEecC
Q 024661          170 IVFEKL  175 (264)
Q Consensus       170 lv~e~~  175 (264)
                      +||||+
T Consensus       118 ~I~efi  123 (395)
T d1nw1a_         118 RLEEYI  123 (395)
T ss_dssp             EEECCC
T ss_pred             eEEEEe
Confidence            889998

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.70  E-value=0.00013  Score=58.21  Aligned_cols=147  Identities=14%  Similarity=0.132  Sum_probs=78.9

Q ss_pred             eEEEeecccCccEEEEEEEeCCCCcEEEEEEEechhhhHHHHHHHHHHHHHHhccCCCCcceEEEce---eeeeCCEEEE
Q 024661           94 YRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARHDIGGTRCVQIRN---WFDYRNHICI  170 (264)
Q Consensus        94 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~---~~~~~~~~~l  170 (264)
                      ..-.+.|..|.--+.|+.... .| .+++|++... ...+.+..|++++..+...++.-+..+...+   ..........
T Consensus        20 ~~~~~~i~~G~~N~ny~v~t~-~g-~yVLri~~~~-~~~~~l~~~~~~l~~L~~~g~pvp~pi~~~~g~~~~~~~~~~~~   96 (316)
T d2ppqa1          20 LTSYKGIAEGVENSNFLLHTT-KD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAA   96 (316)
T ss_dssp             EEEEEEECC---EEEEEEEES-SC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEE
T ss_pred             ceEeecCCCCcccCeEEEEEC-CC-cEEEEEcCCC-CCHHHHHHHHHHHHhhhhccccccccceecCCCcceeeecccce
Confidence            333455667777788988754 33 4899988643 2345566788899999887764333222211   1122455666


Q ss_pred             EEecC-CCCH-----HHH------H---Hhc----C---CCCC------------------CHHHHHHHHHHHHHHHHHH
Q 024661          171 VFEKL-GPSL-----YDF------L---RKN----S---YRSF------------------PIDLVRELGRQLLESVAFM  210 (264)
Q Consensus       171 v~e~~-~~~L-----~~~------l---~~~----~---~~~~------------------~~~~~~~i~~qi~~~l~~l  210 (264)
                      ++.++ +...     ...      +   ...    .   ....                  ........+..+...+.-.
T Consensus        97 ~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  176 (316)
T d2ppqa1          97 LISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAH  176 (316)
T ss_dssp             EEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHH
T ss_pred             eeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcchhHHHHHHHHHHhhhcc
Confidence            67666 3211     111      0   000    0   0000                  0011112222222222222


Q ss_pred             HH----CCCeecCCCCCCEEeecCCcEEeccCCCCCc
Q 024661          211 HE----LRLIHTDLKPENILLVSAEYVKVPDYKVPSP  243 (264)
Q Consensus       211 H~----~~ivH~dikp~Nili~~~~~v~l~Dfg~a~~  243 (264)
                      ..    .|+||+|+.++||+++.+...-|.||+.|..
T Consensus       177 ~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         177 WPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  213 (316)
T ss_dssp             CCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             CccccccccccCCcchhhhhcccccceeEeccccccc
Confidence            22    3799999999999999887778999998854