STRING 9.05 
  FIB1 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
FIB1
FIB1 (FIBRILLARIN 1); snoRNA binding; encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.1f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated. ; Involved in pre-rRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'- hydroxyl methylation of ribose moieties in pre-ribosomal RNA. Site specificity is provided by a gu [...] (308 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
NOP56
NOP56 (Arabidopsis homolog of nucleolar protein Nop56); NOP56-like protein (522 aa)
   0.964
AT3G03920
Gar1 RNA-binding region family protein; Gar1 RNA-binding region family protein; FUNCTIONS IN- R [...] (202 aa)
     0.950
NAP57
NAP57 (Arabidopsis thaliana homologue of NAP57); pseudouridine synthase; Encodes a putative pse [...] (565 aa)
    0.943
DL3925W
RNA binding / protein binding; RNA binding / protein binding; FUNCTIONS IN- protein binding, RN [...] (187 aa)
      0.918
AT1G15440
transducin family protein / WD-40 repeat family protein; transducin family protein / WD-40 repe [...] (900 aa)
     0.914
AT1G25260
acidic ribosomal protein P0-related; acidic ribosomal protein P0-related; FUNCTIONS IN- structu [...] (235 aa)
       0.910
AT4G12600
ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; ribosomal protein L7Ae/L30e/S12e/Gadd45 [...] (128 aa)
     0.902
AT2G19540
transducin family protein / WD-40 repeat family protein; transducin family protein / WD-40 repe [...] (469 aa)
      0.892
AT2G40360
transducin family protein / WD-40 repeat family protein; transducin family protein / WD-40 repe [...] (753 aa)
     0.877
ATNUC-L1
ATNUC-L1; nucleic acid binding / nucleotide binding; Encodes the predominant form of the two nu [...] (557 aa)
      0.869
 
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Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
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Co-expression Experiments Databases Textmining
 
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