Query 024668
Match_columns 264
No_of_seqs 232 out of 1854
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 06:28:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024668.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/024668hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2557 Uncharacterized conser 100.0 1E-37 2.2E-42 270.2 15.8 250 10-261 71-320 (427)
2 smart00584 TLDc domain in TBC 100.0 2.3E-28 5E-33 198.5 12.9 109 153-261 2-112 (165)
3 KOG2372 Oxidation resistance p 99.9 9.8E-28 2.1E-32 196.7 10.2 118 146-263 70-191 (241)
4 KOG0044 Ca2+ sensor (EF-Hand s 99.8 1.4E-20 3E-25 154.5 9.8 119 1-127 69-187 (193)
5 PF07534 TLD: TLD; InterPro: 99.8 1.4E-20 3E-25 148.2 7.9 83 177-260 1-84 (139)
6 COG5142 OXR1 Oxidation resista 99.8 6.7E-21 1.5E-25 149.8 5.4 114 151-264 33-162 (212)
7 KOG0034 Ca2+/calmodulin-depend 99.7 1E-17 2.2E-22 137.5 8.7 112 1-124 71-184 (187)
8 COG5126 FRQ1 Ca2+-binding prot 99.6 2E-15 4.4E-20 120.2 7.8 98 1-118 61-159 (160)
9 KOG4636 Uncharacterized conser 99.6 1.3E-14 2.9E-19 126.9 12.6 205 47-261 142-382 (483)
10 KOG0038 Ca2+-binding kinase in 99.5 1.4E-13 2.9E-18 106.2 7.2 105 3-121 78-183 (189)
11 KOG0027 Calmodulin and related 99.4 3.4E-13 7.4E-18 107.9 7.3 96 1-115 49-149 (151)
12 KOG2801 Probable Rab-GAPs [Int 99.4 8.4E-15 1.8E-19 125.5 -2.9 98 151-249 341-445 (559)
13 PTZ00183 centrin; Provisional 99.3 8.9E-12 1.9E-16 99.6 8.6 98 2-118 59-157 (158)
14 PTZ00184 calmodulin; Provision 99.3 2.5E-11 5.3E-16 95.8 8.5 95 1-114 52-147 (149)
15 KOG0028 Ca2+-binding protein ( 99.2 1.6E-10 3.6E-15 90.6 8.2 95 3-116 76-171 (172)
16 PF13499 EF-hand_7: EF-hand do 99.0 1.4E-10 3E-15 79.4 3.4 66 34-113 1-66 (66)
17 PTZ00184 calmodulin; Provision 98.9 8E-09 1.7E-13 81.3 8.4 96 2-115 17-112 (149)
18 PTZ00183 centrin; Provisional 98.9 9.9E-09 2.1E-13 81.8 8.4 97 1-115 22-118 (158)
19 cd05022 S-100A13 S-100A13: S-1 98.8 1.2E-08 2.5E-13 74.2 6.4 66 33-115 8-75 (89)
20 KOG0027 Calmodulin and related 98.8 2.4E-08 5.1E-13 79.8 8.9 101 1-115 13-113 (151)
21 KOG4666 Predicted phosphate ac 98.8 7.5E-09 1.6E-13 89.9 4.5 108 1-128 264-372 (412)
22 KOG0037 Ca2+-binding protein, 98.7 2.4E-08 5.2E-13 82.5 5.8 98 1-123 99-196 (221)
23 PF13499 EF-hand_7: EF-hand do 98.7 1.1E-08 2.5E-13 69.8 3.2 58 1-59 5-66 (66)
24 cd05027 S-100B S-100B: S-100B 98.7 5E-08 1.1E-12 70.8 6.5 70 33-115 8-79 (88)
25 cd05026 S-100Z S-100Z: S-100Z 98.7 8.3E-08 1.8E-12 70.4 7.5 70 33-115 10-81 (93)
26 KOG0036 Predicted mitochondria 98.7 5.2E-08 1.1E-12 87.3 7.4 93 2-118 57-149 (463)
27 cd05025 S-100A1 S-100A1: S-100 98.6 1.6E-07 3.4E-12 68.7 7.8 71 32-115 8-80 (92)
28 cd05031 S-100A10_like S-100A10 98.6 1.9E-07 4.1E-12 68.6 7.4 71 32-115 7-79 (94)
29 COG5126 FRQ1 Ca2+-binding prot 98.6 2.7E-07 5.8E-12 73.8 8.7 95 2-115 26-120 (160)
30 KOG0030 Myosin essential light 98.6 2.9E-07 6.3E-12 70.9 8.3 84 12-114 64-150 (152)
31 cd00213 S-100 S-100: S-100 dom 98.5 4.8E-07 1E-11 65.4 7.4 71 33-116 8-80 (88)
32 KOG0031 Myosin regulatory ligh 98.5 9.5E-07 2.1E-11 69.2 9.2 87 10-114 77-164 (171)
33 KOG0028 Ca2+-binding protein ( 98.5 1.2E-06 2.6E-11 69.1 9.4 98 2-117 39-137 (172)
34 cd00252 SPARC_EC SPARC_EC; ext 98.5 5.8E-07 1.3E-11 68.4 6.9 62 32-115 47-108 (116)
35 cd05029 S-100A6 S-100A6: S-100 98.4 7.6E-07 1.6E-11 64.6 7.0 68 33-115 10-79 (88)
36 cd05023 S-100A11 S-100A11: S-1 98.4 1.1E-06 2.3E-11 63.9 7.6 70 33-115 9-80 (89)
37 cd00052 EH Eps15 homology doma 98.4 8.9E-07 1.9E-11 60.2 5.9 62 36-117 2-63 (67)
38 smart00027 EH Eps15 homology d 98.4 1.3E-06 2.8E-11 64.3 6.8 65 32-116 9-73 (96)
39 PLN02964 phosphatidylserine de 98.3 5.3E-07 1.2E-11 86.8 5.5 60 1-61 184-243 (644)
40 cd00051 EFh EF-hand, calcium b 98.3 1.5E-06 3.3E-11 57.1 5.2 61 35-113 2-62 (63)
41 PLN02964 phosphatidylserine de 98.3 2.7E-06 5.9E-11 82.0 8.3 93 2-115 149-243 (644)
42 PF13833 EF-hand_8: EF-hand do 98.2 3.2E-06 6.8E-11 55.2 5.7 52 10-61 1-53 (54)
43 cd00051 EFh EF-hand, calcium b 98.2 2E-06 4.4E-11 56.5 4.7 58 1-59 5-62 (63)
44 KOG4223 Reticulocalbin, calume 98.2 2.6E-06 5.5E-11 74.5 6.2 89 3-110 207-300 (325)
45 cd00052 EH Eps15 homology doma 98.1 6E-06 1.3E-10 56.0 5.7 60 1-63 4-63 (67)
46 PF00036 EF-hand_1: EF hand; 98.1 1.8E-06 3.9E-11 49.1 2.3 27 35-61 2-28 (29)
47 KOG0044 Ca2+ sensor (EF-Hand s 98.1 1.1E-05 2.4E-10 66.7 8.0 89 9-115 39-128 (193)
48 KOG2643 Ca2+ binding protein, 98.1 5.1E-06 1.1E-10 75.2 6.1 107 9-121 211-321 (489)
49 smart00027 EH Eps15 homology d 98.1 8.2E-06 1.8E-10 60.0 5.7 62 1-65 15-76 (96)
50 cd05027 S-100B S-100B: S-100B 98.1 1E-05 2.2E-10 58.7 5.7 62 1-63 13-81 (88)
51 cd00252 SPARC_EC SPARC_EC; ext 98.0 7.7E-06 1.7E-10 62.3 4.7 54 1-59 53-106 (116)
52 cd05030 calgranulins Calgranul 98.0 2.8E-05 6.1E-10 56.3 7.0 71 33-116 8-80 (88)
53 cd05022 S-100A13 S-100A13: S-1 98.0 1.5E-05 3.1E-10 57.9 5.4 64 1-65 13-79 (89)
54 PF13405 EF-hand_6: EF-hand do 97.9 5.9E-06 1.3E-10 47.6 2.1 27 34-60 1-27 (31)
55 cd05026 S-100Z S-100Z: S-100Z 97.9 2.3E-05 5E-10 57.4 5.7 64 1-64 15-84 (93)
56 PF13833 EF-hand_8: EF-hand do 97.9 8.9E-06 1.9E-10 53.0 3.1 52 46-115 1-53 (54)
57 cd05031 S-100A10_like S-100A10 97.9 2.8E-05 6.1E-10 56.9 5.9 61 1-62 13-80 (94)
58 KOG0034 Ca2+/calmodulin-depend 97.9 1.9E-05 4.1E-10 65.1 5.2 60 1-61 109-175 (187)
59 cd05025 S-100A1 S-100A1: S-100 97.9 3.9E-05 8.4E-10 55.9 6.1 63 1-64 14-83 (92)
60 PF00036 EF-hand_1: EF hand; 97.9 7.2E-06 1.6E-10 46.5 1.5 25 1-26 5-29 (29)
61 KOG0036 Predicted mitochondria 97.8 7.4E-05 1.6E-09 67.4 8.1 105 1-129 19-130 (463)
62 cd00213 S-100 S-100: S-100 dom 97.8 4.4E-05 9.6E-10 55.0 5.3 63 1-64 13-82 (88)
63 cd05029 S-100A6 S-100A6: S-100 97.8 6.5E-05 1.4E-09 54.4 5.5 64 1-64 15-82 (88)
64 KOG0037 Ca2+-binding protein, 97.7 0.00024 5.3E-09 59.0 8.9 102 2-128 63-170 (221)
65 KOG2562 Protein phosphatase 2 97.7 0.00015 3.2E-09 66.4 8.1 108 9-126 327-434 (493)
66 PF14658 EF-hand_9: EF-hand do 97.7 7E-05 1.5E-09 50.8 4.5 63 37-115 2-64 (66)
67 cd05023 S-100A11 S-100A11: S-1 97.6 0.00014 3E-09 52.8 5.8 62 2-64 15-83 (89)
68 PF13202 EF-hand_5: EF hand; P 97.6 4.4E-05 9.5E-10 41.7 2.3 25 35-59 1-25 (25)
69 PF14658 EF-hand_9: EF-hand do 97.6 0.00026 5.5E-09 48.0 6.1 60 1-61 3-64 (66)
70 KOG0041 Predicted Ca2+-binding 97.5 0.00016 3.4E-09 59.4 5.4 66 33-116 99-164 (244)
71 cd05024 S-100A10 S-100A10: A s 97.5 0.00072 1.6E-08 49.0 7.9 68 34-115 9-76 (91)
72 KOG0377 Protein serine/threoni 97.4 0.00072 1.6E-08 61.6 8.7 69 33-115 547-615 (631)
73 PRK12309 transaldolase/EF-hand 97.2 0.00073 1.6E-08 62.0 6.0 54 31-115 332-385 (391)
74 cd05030 calgranulins Calgranul 97.2 0.00086 1.9E-08 48.5 5.2 62 2-64 14-82 (88)
75 KOG2643 Ca2+ binding protein, 97.2 0.0026 5.7E-08 58.0 9.2 67 2-69 239-322 (489)
76 PF09069 EF-hand_3: EF-hand; 97.1 0.0029 6.2E-08 45.8 7.4 83 32-125 2-85 (90)
77 KOG0031 Myosin regulatory ligh 97.1 0.0043 9.3E-08 49.0 8.4 61 32-114 31-91 (171)
78 KOG4065 Uncharacterized conser 96.9 0.0059 1.3E-07 45.8 7.1 79 30-112 64-142 (144)
79 KOG4223 Reticulocalbin, calume 96.7 0.0061 1.3E-07 53.7 7.5 89 9-115 53-141 (325)
80 KOG0030 Myosin essential light 96.7 0.0096 2.1E-07 46.3 7.6 16 100-115 101-116 (152)
81 KOG0377 Protein serine/threoni 96.6 0.0038 8.3E-08 57.1 5.3 61 1-62 552-616 (631)
82 PF13202 EF-hand_5: EF hand; P 96.6 0.0016 3.5E-08 35.4 1.8 22 1-23 4-25 (25)
83 PF13405 EF-hand_6: EF-hand do 96.4 0.0018 3.8E-08 37.1 1.5 23 1-24 5-27 (31)
84 KOG4347 GTPase-activating prot 96.2 0.0029 6.3E-08 60.3 2.6 53 1-55 560-612 (671)
85 smart00054 EFh EF-hand, calciu 96.1 0.0062 1.3E-07 32.7 2.6 27 35-61 2-28 (29)
86 PF10591 SPARC_Ca_bdg: Secrete 95.8 0.0017 3.7E-08 49.2 -0.7 61 31-111 52-112 (113)
87 KOG0751 Mitochondrial aspartat 95.7 0.015 3.1E-07 54.1 4.7 56 4-62 82-137 (694)
88 PF14788 EF-hand_10: EF hand; 95.7 0.045 9.8E-07 35.1 5.4 49 14-62 2-50 (51)
89 PF12763 EF-hand_4: Cytoskelet 95.5 0.044 9.5E-07 40.9 5.7 67 30-117 7-73 (104)
90 PF10591 SPARC_Ca_bdg: Secrete 95.5 0.0036 7.8E-08 47.4 -0.2 54 1-57 59-112 (113)
91 KOG0041 Predicted Ca2+-binding 95.5 0.064 1.4E-06 44.3 7.0 63 1-64 104-166 (244)
92 PF14788 EF-hand_10: EF hand; 95.4 0.021 4.6E-07 36.6 3.4 47 50-114 2-48 (51)
93 PF12763 EF-hand_4: Cytoskelet 95.3 0.039 8.4E-07 41.1 5.0 58 1-62 15-72 (104)
94 KOG4251 Calcium binding protei 95.3 0.043 9.3E-07 46.7 5.7 32 78-115 233-264 (362)
95 KOG4251 Calcium binding protei 95.3 0.031 6.7E-07 47.5 4.8 68 32-115 100-168 (362)
96 cd05024 S-100A10 S-100A10: A s 95.0 0.074 1.6E-06 38.6 5.6 55 10-64 20-79 (91)
97 KOG0038 Ca2+-binding kinase in 94.7 0.083 1.8E-06 41.5 5.4 59 2-61 114-177 (189)
98 KOG0046 Ca2+-binding actin-bun 94.3 0.096 2.1E-06 49.2 5.7 67 33-115 19-85 (627)
99 KOG0040 Ca2+-binding actin-bun 93.6 0.18 3.9E-06 52.8 6.7 93 1-111 2258-2357(2399)
100 KOG0039 Ferric reductase, NADH 93.6 0.16 3.4E-06 50.0 6.2 94 10-120 1-94 (646)
101 smart00054 EFh EF-hand, calciu 93.4 0.052 1.1E-06 28.8 1.6 24 1-25 5-28 (29)
102 KOG4578 Uncharacterized conser 91.7 0.2 4.3E-06 44.5 3.6 59 2-61 339-398 (421)
103 KOG2562 Protein phosphatase 2 91.6 0.56 1.2E-05 43.5 6.6 108 2-127 231-360 (493)
104 KOG4578 Uncharacterized conser 91.5 0.13 2.8E-06 45.6 2.3 69 33-118 333-401 (421)
105 PF09279 EF-hand_like: Phospho 90.1 0.29 6.4E-06 34.5 2.7 68 35-115 2-69 (83)
106 KOG0040 Ca2+-binding actin-bun 89.1 0.55 1.2E-05 49.4 4.6 72 34-116 2254-2325(2399)
107 KOG4286 Dystrophin-like protei 88.8 1.1 2.4E-05 44.0 6.2 114 2-126 476-591 (966)
108 PLN02952 phosphoinositide phos 88.7 3.1 6.7E-05 40.5 9.3 96 9-115 12-110 (599)
109 KOG3555 Ca2+-binding proteogly 87.6 1 2.2E-05 40.4 4.8 62 32-115 249-310 (434)
110 KOG1029 Endocytic adaptor prot 86.5 1.1 2.3E-05 44.3 4.6 65 31-115 193-257 (1118)
111 PRK12309 transaldolase/EF-hand 81.7 3.9 8.4E-05 37.8 6.1 30 35-64 359-388 (391)
112 KOG3866 DNA-binding protein of 81.1 2.2 4.8E-05 37.7 4.0 70 37-115 248-324 (442)
113 PF08726 EFhand_Ca_insen: Ca2+ 80.5 1.4 3E-05 30.2 2.1 28 31-59 4-31 (69)
114 KOG0169 Phosphoinositide-speci 79.3 4.2 9E-05 40.2 5.6 61 1-62 141-201 (746)
115 KOG4065 Uncharacterized conser 79.2 4.2 9.1E-05 30.8 4.4 55 2-57 73-141 (144)
116 KOG3555 Ca2+-binding proteogly 79.0 1.7 3.7E-05 39.0 2.7 55 1-60 255-309 (434)
117 KOG0751 Mitochondrial aspartat 77.4 11 0.00023 35.8 7.4 91 4-115 44-136 (694)
118 KOG2243 Ca2+ release channel ( 73.8 5.1 0.00011 42.4 4.6 58 39-115 4063-4120(5019)
119 KOG0046 Ca2+-binding actin-bun 71.8 11 0.00023 36.0 6.0 60 2-63 25-87 (627)
120 KOG1029 Endocytic adaptor prot 71.0 5.4 0.00012 39.6 4.0 56 1-59 200-255 (1118)
121 KOG4301 Beta-dystrobrevin [Cyt 70.2 3.6 7.7E-05 36.9 2.4 101 3-117 117-217 (434)
122 PF12174 RST: RCD1-SRO-TAF4 (R 68.5 15 0.00032 25.2 4.8 51 11-64 6-56 (70)
123 PF05042 Caleosin: Caleosin re 68.4 16 0.00036 29.6 5.7 37 78-120 93-129 (174)
124 PF00404 Dockerin_1: Dockerin 65.3 7.6 0.00017 20.0 2.1 15 43-57 1-15 (21)
125 KOG0169 Phosphoinositide-speci 62.9 25 0.00053 35.0 6.7 79 32-128 135-216 (746)
126 PF05517 p25-alpha: p25-alpha 62.2 11 0.00025 29.9 3.7 65 36-115 2-69 (154)
127 KOG4347 GTPase-activating prot 61.0 24 0.00051 34.6 6.1 96 14-130 535-631 (671)
128 TIGR01848 PHA_reg_PhaR polyhyd 54.8 28 0.00061 25.9 4.4 68 40-115 10-77 (107)
129 PF09279 EF-hand_like: Phospho 54.6 10 0.00022 26.4 2.1 58 2-61 6-69 (83)
130 KOG4666 Predicted phosphate ac 49.7 18 0.0004 32.4 3.2 71 32-119 258-328 (412)
131 PF05042 Caleosin: Caleosin re 48.0 26 0.00056 28.5 3.6 30 32-61 95-124 (174)
132 COG4359 Uncharacterized conser 43.3 90 0.0019 25.9 6.0 80 9-116 9-88 (220)
133 PF08672 APC2: Anaphase promot 42.5 66 0.0014 21.2 4.4 34 30-64 12-47 (60)
134 KOG0042 Glycerol-3-phosphate d 41.8 27 0.00058 33.8 3.2 64 34-115 594-657 (680)
135 cd08324 CARD_NOD1_CARD4 Caspas 40.9 84 0.0018 22.4 4.8 52 10-66 26-77 (85)
136 KOG0035 Ca2+-binding actin-bun 39.8 57 0.0012 33.3 5.3 86 18-116 729-817 (890)
137 PF07879 PHB_acc_N: PHB/PHA ac 37.7 25 0.00054 23.6 1.7 49 40-90 10-58 (64)
138 KOG1265 Phospholipase C [Lipid 37.3 1.4E+02 0.003 30.8 7.4 94 14-115 205-299 (1189)
139 smart00549 TAFH TAF homology. 36.7 1.2E+02 0.0026 22.0 5.1 48 54-115 4-51 (92)
140 KOG2871 Uncharacterized conser 34.8 19 0.00042 32.8 1.1 33 30-62 306-338 (449)
141 PF09068 EF-hand_2: EF hand; 34.3 32 0.00069 26.5 2.1 50 11-60 57-124 (127)
142 KOG0035 Ca2+-binding actin-bun 33.9 1.2E+02 0.0026 31.2 6.5 101 1-122 752-857 (890)
143 cd02977 ArsC_family Arsenate R 33.4 62 0.0013 23.5 3.5 64 38-121 25-91 (105)
144 PLN02228 Phosphoinositide phos 32.2 1.7E+02 0.0037 28.6 7.0 71 31-115 22-92 (567)
145 KOG1955 Ral-GTPase effector RA 31.6 77 0.0017 30.3 4.4 60 36-115 234-293 (737)
146 PF07531 TAFH: NHR1 homology t 31.5 1.7E+02 0.0037 21.4 5.3 60 54-127 5-70 (96)
147 PRK13344 spxA transcriptional 31.3 75 0.0016 24.5 3.8 64 37-121 25-91 (132)
148 cd08327 CARD_RAIDD Caspase act 31.0 99 0.0021 22.4 4.1 55 46-123 32-86 (94)
149 KOG3449 60S acidic ribosomal p 28.4 2E+02 0.0044 21.5 5.3 44 35-90 3-46 (112)
150 KOG1955 Ral-GTPase effector RA 26.9 49 0.0011 31.5 2.3 32 32-63 264-295 (737)
151 cd06404 PB1_aPKC PB1 domain is 26.0 1.1E+02 0.0023 21.8 3.4 20 11-30 17-36 (83)
152 cd03034 ArsC_ArsC Arsenate Red 25.8 1.2E+02 0.0026 22.5 3.9 62 39-121 26-90 (112)
153 PF09373 PMBR: Pseudomurein-bi 25.6 73 0.0016 18.1 2.1 18 47-64 2-19 (33)
154 PLN02222 phosphoinositide phos 25.6 2.3E+02 0.005 27.8 6.7 67 32-115 24-90 (581)
155 PF14974 DUF4511: Domain of un 24.8 3E+02 0.0064 20.5 7.0 67 31-123 23-90 (105)
156 KOG0103 Molecular chaperones H 24.7 57 0.0012 32.3 2.4 67 42-128 292-358 (727)
157 PLN02952 phosphoinositide phos 23.9 1.8E+02 0.0039 28.6 5.7 53 46-115 13-65 (599)
158 cd03032 ArsC_Spx Arsenate Redu 23.8 86 0.0019 23.3 2.9 63 38-121 26-91 (115)
159 COG5562 Phage envelope protein 23.6 38 0.00082 26.3 0.8 18 9-26 84-101 (137)
160 PF09851 SHOCT: Short C-termin 23.4 1.4E+02 0.003 16.7 3.0 26 34-62 4-29 (31)
161 cd03035 ArsC_Yffb Arsenate Red 23.3 61 0.0013 23.8 1.9 64 38-121 25-89 (105)
162 PF08414 NADPH_Ox: Respiratory 23.3 1.2E+02 0.0027 22.2 3.4 62 33-114 30-91 (100)
163 PF12631 GTPase_Cys_C: Catalyt 23.1 1.1E+02 0.0024 20.8 3.0 50 33-90 23-72 (73)
164 KOG4004 Matricellular protein 21.7 43 0.00092 28.0 0.8 56 2-59 193-248 (259)
165 KOG2243 Ca2+ release channel ( 20.5 1.6E+02 0.0034 32.3 4.6 54 2-57 4063-4116(5019)
166 PRK12559 transcriptional regul 20.4 89 0.0019 24.0 2.4 63 38-121 26-91 (131)
167 KOG1707 Predicted Ras related/ 20.2 94 0.002 30.3 2.9 32 32-63 314-345 (625)
168 PLN02223 phosphoinositide phos 20.2 3.8E+02 0.0082 26.0 6.9 77 31-115 14-92 (537)
No 1
>KOG2557 consensus Uncharacterized conserved protein, contains TLDc domain [Function unknown]
Probab=100.00 E-value=1e-37 Score=270.16 Aligned_cols=250 Identities=56% Similarity=0.922 Sum_probs=211.2
Q ss_pred CCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHh
Q 024668 10 NDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNA 89 (264)
Q Consensus 10 ~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~ 89 (264)
++-.++.++++...+...+|+.+++.++++.+.|++++|...+.++.+++..++.++...+.+...+..-+...+.+...
T Consensus 71 q~~~~~l~k~~~~~~~~~~gt~dq~a~mL~~~~~~sgn~~~~~~q~eQ~~~~vlks~~~~ess~~es~~~~~~d~af~~~ 150 (427)
T KOG2557|consen 71 QDDKMTLEKLVIAKATYEKGTDDQIAEMLYQTLDVNGNGVLSRSQLEQFLVVVLKSVFSTESSDAESSDYKKMDDAFLNA 150 (427)
T ss_pred CCccchHHHHhhHHhhhccCcccHHHHHHHHHHhhccccccchhHHHHHHHHHhhheeeecccchhhhhhhhhhccccch
Confidence 44579999999999998899999999999999999999999999999999998887655444332211211222222222
Q ss_pred cccccCCcCCCCCCCCHHHHHHhhhcCchhhhhhhcccCCCCCCCCCcccCcccCCCCCCcCcccCCHHHHHHHHhcCCC
Q 024668 90 ATFSKNGERSSNKSMSFEDFRSWCTLIPSARKFLGGLLTPPDPGRPGCQVPRLLCSENVHSSMLLLRKEYAWHIGGALSP 169 (264)
Q Consensus 90 ~d~d~~~~~~~dg~is~eeF~~~~~~~p~~~~~l~~ll~~~~~~~~~~~~p~l~~~~~~~~~~~iL~~~~~~~l~~~lp~ 169 (264)
....++.+. -.+..++|.|+.|+.-.|.+.+++.+.|.++.+..+.-.+|.|++++..++...++..++++.|..+||.
T Consensus 151 ~~~~ke~e~-t~p~~~le~~~s~~p~f~~i~r~~fs~L~~~~g~sk~pil~~l~~~~~~sh~~~~i~~~~~l~in~~lp~ 229 (427)
T KOG2557|consen 151 ATFSKEDEG-TEPGMSLEDFRSWCPFFPTIRKFLFSLLMPPSGVSKGPILPHLLYEDSVSHDRLLIKKEYALHINGALPH 229 (427)
T ss_pred hhhcccccc-CCCchhHHHHhhhchHHHHHHHHHHHHhccccCCccCccccccccccccccccceeecchhheecccCCc
Confidence 222111110 2456788999999999999999999998887777677788888999999999999999999999999999
Q ss_pred CCCCCcEEEeeeCCcchhHHHHHHhhcCCCCCEEEEEEcCCCcEEEEeeCCCCeeCCCeecCCceEEEEEcCCceEecCC
Q 024668 170 HELEEWKLLYHSAMNGLSFNTFLGSISNDEGSAVLIIKDKEGHIYGGYASQPWERHGDFYGDMKSFLFQLYPKLAIYRPT 249 (264)
Q Consensus 170 ~~~~~~~lly~~~~~G~s~~~~~~~~~~~~~p~ll~i~~~~~~vfG~y~~~~~~~~~~~~g~~~~FlF~l~p~~~v~~~~ 249 (264)
....+|++||+++.||.|+++|..++.+. |||++||++++|+|||+|+|++|...++|+||.+||||+|.|++.||++|
T Consensus 230 ~~r~~wr~lysss~~gqsfSt~l~~~~~~-gp~v~vI~d~d~~vFGgyASq~we~~pQF~Gd~~~fLfqL~Pkma~y~aT 308 (427)
T KOG2557|consen 230 HERVEWKLLYSSSVHGQSFSTFLGHTSGM-GPSVLIIKDTEGYVFGGYASQPWERYPQFYGDMKSFLFQLNPKMAIYRAT 308 (427)
T ss_pred chhhceeeeeeecccccchhhhhhhccCC-CCeEEEEEcCCCceecccccCcccccCccCCccceeeeeecchheeeccc
Confidence 99999999999999999999999999976 99999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEecC
Q 024668 250 GANSNLQWVYVY 261 (264)
Q Consensus 250 ~~n~~~~~~~~~ 261 (264)
|.|+||+|.|-+
T Consensus 309 gyn~~yqylN~~ 320 (427)
T KOG2557|consen 309 GYNTNYQYLNFT 320 (427)
T ss_pred CCccceEEeccc
Confidence 999999999854
No 2
>smart00584 TLDc domain in TBC and LysM domain containing proteins.
Probab=99.96 E-value=2.3e-28 Score=198.52 Aligned_cols=109 Identities=38% Similarity=0.592 Sum_probs=103.2
Q ss_pred ccCCHHHHHHHHhcCCCC-CCCCcEEEeeeCCcchhHHHHHHhhcCCCCCEEEEEEcCCCcEEEEeeCCCCeeCCCeecC
Q 024668 153 LLLRKEYAWHIGGALSPH-ELEEWKLLYHSAMNGLSFNTFLGSISNDEGSAVLIIKDKEGHIYGGYASQPWERHGDFYGD 231 (264)
Q Consensus 153 ~iL~~~~~~~l~~~lp~~-~~~~~~lly~~~~~G~s~~~~~~~~~~~~~p~ll~i~~~~~~vfG~y~~~~~~~~~~~~g~ 231 (264)
.||++++++.|+.+||.. +..+|+|||++++||+|+++|+++|.++++|+|+|||+.++.|||||++++|+.++.|||+
T Consensus 2 ~iL~~~~~~~l~~~lP~~~~~~~~~llyss~~~G~s~~~~~~~~~~~~~P~lliik~~~~~ifGaf~~~~w~~~~~~~G~ 81 (165)
T smart00584 2 SILSEEILALINSHLPTRAEGYPWTLLYSSSQHGYSLNTLYRKVEGYRPPTLLIIKDTDGEVFGAYASQAWRVSDHFYGT 81 (165)
T ss_pred ccCCHHHHHHHHHhCCHhHhCCCeEEEEEcCcCCccHHHHHHHhcccCCCEEEEEEeCCCCEEEEEcCCCCccCCcEECC
Confidence 589999999999999998 4667999999999999999999999998789999999999999999999999999999999
Q ss_pred CceEEEEEcCCceEecCCCCCC-cEEEEecC
Q 024668 232 MKSFLFQLYPKLAIYRPTGANS-NLQWVYVY 261 (264)
Q Consensus 232 ~~~FlF~l~p~~~v~~~~~~n~-~~~~~~~~ 261 (264)
++||||++.|.+++|+|++.|+ .|++|+++
T Consensus 82 ~~sFLF~l~p~~~~y~~~~~n~~~~~~~~~~ 112 (165)
T smart00584 82 GESFLFQLNPKFVVYDWTGKNKYYYINGTPD 112 (165)
T ss_pred CCeEEEEEcCCceEEcccccCcEEEEecCCC
Confidence 9999999999999999999997 88888764
No 3
>KOG2372 consensus Oxidation resistance protein [Replication, recombination and repair]
Probab=99.95 E-value=9.8e-28 Score=196.71 Aligned_cols=118 Identities=25% Similarity=0.568 Sum_probs=110.1
Q ss_pred CCCCcCcccCCHHHHHHHHhcCCCC-CCC-CcEEEeeeCCcchhHHHHHHhhcCCCCCEEEEEEcCCCcEEEEeeCCCCe
Q 024668 146 ENVHSSMLLLRKEYAWHIGGALSPH-ELE-EWKLLYHSAMNGLSFNTFLGSISNDEGSAVLIIKDKEGHIYGGYASQPWE 223 (264)
Q Consensus 146 ~~~~~~~~iL~~~~~~~l~~~lp~~-~~~-~~~lly~~~~~G~s~~~~~~~~~~~~~p~ll~i~~~~~~vfG~y~~~~~~ 223 (264)
|...-.+.||+++++..|..+||++ +.. .|+|+|++.+||+|+++||+++..-+.|+++|||+++|+|||||++++++
T Consensus 70 ~~~~~~~~ll~~~~~~~l~e~lp~R~q~~~pW~liyst~~hG~Sl~TlY~~~~~~~~p~lLvird~dg~vFGa~~~~~i~ 149 (241)
T KOG2372|consen 70 PDLRYKSQLLTPEMIRQLREHLPPRVQGYTPWRLIYSTEKHGFSLRTLYRSMAELDEPVLLVIRDTDGDVFGAFVSDAIR 149 (241)
T ss_pred cccccccccCCHHHHHHHHhhCCcceeeecchhhhcccccccccHHHHHHhhhcccCcEEEEEEcCCCCEeeEeecccee
Confidence 3344467899999999999999998 555 99999999999999999999999888999999999999999999999999
Q ss_pred eCCCeecCCceEEEEEcC--CceEecCCCCCCcEEEEecCCC
Q 024668 224 RHGDFYGDMKSFLFQLYP--KLAIYRPTGANSNLQWVYVYLF 263 (264)
Q Consensus 224 ~~~~~~g~~~~FlF~l~p--~~~v~~~~~~n~~~~~~~~~~~ 263 (264)
++.+|||+++||||++.| +++||+|||.|+.|+||+.++.
T Consensus 150 p~dhyyGtgetFLft~~~~~e~~vy~~TG~n~f~i~c~~dfL 191 (241)
T KOG2372|consen 150 PNDHYYGTGETFLFTFFPGREFKVYRWTGDNSFFIYCDKDFL 191 (241)
T ss_pred ccCCcCCCCCeEEEEecCCCceeEeeecCCcceEEEechhHh
Confidence 999999999999999999 9999999999999999998764
No 4
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.83 E-value=1.4e-20 Score=154.55 Aligned_cols=119 Identities=19% Similarity=0.363 Sum_probs=105.6
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchH
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQ 80 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~ 80 (264)
+|+.||. |++|.|+|+||+++++..++|+.+||++++|++||.||+|+|+++|+.+++.++..+......+ ..+...+
T Consensus 69 vF~~fD~-~~dg~i~F~Efi~als~~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~-~~~~~~~ 146 (193)
T KOG0044|consen 69 VFRTFDK-NKDGTIDFLEFICALSLTSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALP-EDEETPE 146 (193)
T ss_pred HHHHhcc-cCCCCcCHHHHHHHHHHHcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCC-cccccHH
Confidence 5889995 9999999999999999999999999999999999999999999999999999998875543333 3345678
Q ss_pred HHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhcCchhhhhhhccc
Q 024668 81 DIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTLIPSARKFLGGLL 127 (264)
Q Consensus 81 ~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~~p~~~~~l~~ll 127 (264)
+.++.+|+++|. + +||.||++||...+..+|.+.+.+....
T Consensus 147 ~~v~~if~k~D~--n----~Dg~lT~eef~~~~~~d~~i~~~l~~~~ 187 (193)
T KOG0044|consen 147 ERVDKIFSKMDK--N----KDGKLTLEEFIEGCKADPSILRALEQDP 187 (193)
T ss_pred HHHHHHHHHcCC--C----CCCcccHHHHHHHhhhCHHHHHHhhhcc
Confidence 999999999976 4 8999999999999999999998876554
No 5
>PF07534 TLD: TLD; InterPro: IPR006571 TLDc is a domain of unknown function, restricted to eukaryotes, and commonly found in TBC (IPR000195 from INTERPRO) and LysM (IPR002482 from INTERPRO) domain containing proteins [].; PDB: 4ACJ_A.
Probab=99.83 E-value=1.4e-20 Score=148.18 Aligned_cols=83 Identities=43% Similarity=0.828 Sum_probs=58.7
Q ss_pred EEeeeCCcchhHHHHHHhhcCCCCCEEEEEEcCCCcEEEEeeCCCCeeCCC-eecCCceEEEEEcCCceEecCCCCCCcE
Q 024668 177 LLYHSAMNGLSFNTFLGSISNDEGSAVLIIKDKEGHIYGGYASQPWERHGD-FYGDMKSFLFQLYPKLAIYRPTGANSNL 255 (264)
Q Consensus 177 lly~~~~~G~s~~~~~~~~~~~~~p~ll~i~~~~~~vfG~y~~~~~~~~~~-~~g~~~~FlF~l~p~~~v~~~~~~n~~~ 255 (264)
|||++++||+|+++|+++|.++ +|+++|+++.+|.|||||++.+|+.+.. |+|+.++|||++.|.+++|+|++.|..|
T Consensus 1 Lly~s~~dG~s~~~f~~~~~~~-~~~l~iv~t~~g~iFG~y~~~~~~~~~~~~~~~~~~FlF~l~~~~~~~~~~~~~~~~ 79 (139)
T PF07534_consen 1 LLYSSSRDGFSFNTFHSKCDGK-GPTLLIVKTSDGQIFGAYTSQPWKSSNKGYFGDSESFLFSLEPKFKIFKWTGKNQNY 79 (139)
T ss_dssp EEEEHHHH-S-HHHHHHHHTT--S-EEEEEEETTS-EEEEEESS-----SS--B--TT-EEEE-SSS-EEEE--SS----
T ss_pred CcCccchhCcCHHHHHHhcCCC-CCEEEEEECCCCcEEEEEeCCcccccCccccCCCCeEEEEeccccceeeccccccee
Confidence 7999999999999999999977 9999999999999999999999987655 9999999999999999999999999999
Q ss_pred EEEec
Q 024668 256 QWVYV 260 (264)
Q Consensus 256 ~~~~~ 260 (264)
++++.
T Consensus 80 ~~~~~ 84 (139)
T PF07534_consen 80 INCNN 84 (139)
T ss_dssp EEEET
T ss_pred eeccC
Confidence 99987
No 6
>COG5142 OXR1 Oxidation resistance protein [DNA replication, recombination, and repair]
Probab=99.82 E-value=6.7e-21 Score=149.82 Aligned_cols=114 Identities=26% Similarity=0.463 Sum_probs=104.9
Q ss_pred CcccCCHHHHHHHHhcCCCCC--CCCcEEEeeeCCcchhHHHHHHhhcCCCCC-----EEEEEEcCCCcEEEEeeCCCCe
Q 024668 151 SMLLLRKEYAWHIGGALSPHE--LEEWKLLYHSAMNGLSFNTFLGSISNDEGS-----AVLIIKDKEGHIYGGYASQPWE 223 (264)
Q Consensus 151 ~~~iL~~~~~~~l~~~lp~~~--~~~~~lly~~~~~G~s~~~~~~~~~~~~~p-----~ll~i~~~~~~vfG~y~~~~~~ 223 (264)
...||+++++..|...||.+. ...|+||||..+||+|+++|+..|...+.| ++++|||++|.|||||.++.++
T Consensus 33 K~~llt~e~~~~ire~lp~Ry~~~t~W~llySl~~~G~Sl~t~y~~~~~~~~~frrvg~VLa~rd~dgd~FGaf~~d~~~ 112 (212)
T COG5142 33 KASLLTEEIVTRIRESLPDRYKYSTSWRLLYSLFENGFSLRTFYESFGENEWPFRRVGFVLACRDKDGDLFGAFFEDRIR 112 (212)
T ss_pred hcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcchhHHHHHHHhCcccCcccCceEEEEEEcCCCCEeeeechhhee
Confidence 457999999999999999973 689999999999999999999999765566 9999999999999999999999
Q ss_pred eCCCeecCCceEEEEE--cC-------CceEecCCCCCCcEEEEecCCCC
Q 024668 224 RHGDFYGDMKSFLFQL--YP-------KLAIYRPTGANSNLQWVYVYLFS 264 (264)
Q Consensus 224 ~~~~~~g~~~~FlF~l--~p-------~~~v~~~~~~n~~~~~~~~~~~~ 264 (264)
+..+|||.+++|||++ .| ++.+|+.+|.+..-+||++++++
T Consensus 113 pa~hy~G~~e~FLwk~~~~p~~~~~~k~~~~yp~~g~~~f~iYCt~~Fla 162 (212)
T COG5142 113 PARHYYGRDEMFLWKAARRPADRLADKEVAVYPISGGKGFGIYCTPDFLA 162 (212)
T ss_pred ccCCCCCCccEEEEeeccCCccccCcceeEEeEeecCCceEEEEchHHhh
Confidence 9999999999999999 34 68899999999999999998753
No 7
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=99.73 E-value=1e-17 Score=137.52 Aligned_cols=112 Identities=21% Similarity=0.361 Sum_probs=95.6
Q ss_pred CcccccccCCCcc-eeHHHHHHHHHHhh-CCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCc
Q 024668 1 MFNLVTQKRNDHK-LTFEDLVVAKATYE-KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNS 78 (264)
Q Consensus 1 lf~~~D~~d~~g~-I~f~eF~~~ls~~~-~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~ 78 (264)
+++.|| ++++|. |+|++|+..++.+. ++..++|+++||++||.+++|.|+++||.+++..+++.... . .+..
T Consensus 71 I~~~f~-~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~----~-~~e~ 144 (187)
T KOG0034|consen 71 IIDRFD-TDGNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDD----M-SDEQ 144 (187)
T ss_pred HHHHHh-ccCCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCc----c-hHHH
Confidence 467788 488888 99999999999998 66777899999999999999999999999999998874111 0 1245
Q ss_pred hHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhcCchhhhhhh
Q 024668 79 HQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTLIPSARKFLG 124 (264)
Q Consensus 79 ~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~~p~~~~~l~ 124 (264)
.+++++.++.++|.| +||+|+++||++.+.+.|.+.+.++
T Consensus 145 ~~~i~d~t~~e~D~d------~DG~IsfeEf~~~v~~~P~~~~~m~ 184 (187)
T KOG0034|consen 145 LEDIVDKTFEEADTD------GDGKISFEEFCKVVEKQPDLLEKMT 184 (187)
T ss_pred HHHHHHHHHHHhCCC------CCCcCcHHHHHHHHHcCccHHHHcC
Confidence 678999999999775 8999999999999999999998764
No 8
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.60 E-value=2e-15 Score=120.17 Aligned_cols=98 Identities=16% Similarity=0.360 Sum_probs=86.4
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhh-CCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCch
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYE-KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSH 79 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~-~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~ 79 (264)
||+.+| . |.+.|+|.+|+.+|+... ++..+|+++.||++||+|++|+|+..||+.++..+. +...
T Consensus 61 l~~~~d-~-~~~~idf~~Fl~~ms~~~~~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lg------------e~~~ 126 (160)
T COG5126 61 LFEEID-A-GNETVDFPEFLTVMSVKLKRGDKEEELREAFKLFDKDHDGYISIGELRRVLKSLG------------ERLS 126 (160)
T ss_pred HHHhcc-C-CCCccCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhc------------ccCC
Confidence 466788 4 889999999999999987 778899999999999999999999999999988553 3567
Q ss_pred HHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhcCch
Q 024668 80 QDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTLIPS 118 (264)
Q Consensus 80 ~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~~p~ 118 (264)
++.++.+++.++. + +||.|++++|.+.+...|.
T Consensus 127 deev~~ll~~~d~--d----~dG~i~~~eF~~~~~~~~~ 159 (160)
T COG5126 127 DEEVEKLLKEYDE--D----GDGEIDYEEFKKLIKDSPT 159 (160)
T ss_pred HHHHHHHHHhcCC--C----CCceEeHHHHHHHHhccCC
Confidence 8999999999966 4 8999999999999887764
No 9
>KOG4636 consensus Uncharacterized conserved protein with TLDc domain [Function unknown]
Probab=99.59 E-value=1.3e-14 Score=126.87 Aligned_cols=205 Identities=18% Similarity=0.202 Sum_probs=139.8
Q ss_pred CCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhcCc-----hhhh
Q 024668 47 DGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTLIP-----SARK 121 (264)
Q Consensus 47 ~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~~p-----~~~~ 121 (264)
++.+...|+..+|..+..+.+.-+.....++.+...+..+.+....+. ...|-.-..+|.+.+- .+.+
T Consensus 142 k~~~~vsev~~fL~vC~t~a~~gra~~~~c~fi~~~~~~~t~~~~~c~-------dS~Sgnsi~rW~~~n~~~l~l~vgK 214 (483)
T KOG4636|consen 142 KILQPVSEVHHFLKVCSTSAGAGRAIQGDCQFIKILVEEMTDGKTGCE-------DSQSGNSIIRWRRENCEKLTLAVGK 214 (483)
T ss_pred EEeechhHHHHHHHHHHhhhcCCchhhcCCcHHHHHHHHHhccccccc-------ccccCCceeeehhhhhHHHHHHHHH
Confidence 477889999999988887766544444455666666666655543321 1222222334444322 2445
Q ss_pred hhhcccC-CCC-C------CCCCcccCcc----------cCCCCCCcCcccCCHHHHHHHHhcCCCC-------------
Q 024668 122 FLGGLLT-PPD-P------GRPGCQVPRL----------LCSENVHSSMLLLRKEYAWHIGGALSPH------------- 170 (264)
Q Consensus 122 ~l~~ll~-~~~-~------~~~~~~~p~l----------~~~~~~~~~~~iL~~~~~~~l~~~lp~~------------- 170 (264)
|+...|. -+| . +....+-|.+ .+...-.+...+++-.-+|.|+..||+.
T Consensus 215 fltwaLmTvpcltEcqn~~c~~~lqt~~~aednPsstavD~S~skTsed~L~plgqaW~l~~slp~~ys~eil~~pp~ts 294 (483)
T KOG4636|consen 215 FLTWALMTVPCLTECQNRVCSAVLQTKIIAEDNPSSTAVDYSSSKTSEDILSPLGQAWYLQSSLPAVYSPEILAKPPETS 294 (483)
T ss_pred HHHHHhhccchhhhhhhhhhcceecceeecccCCCccccccccccccchhhhhHHHHHHHhccCCcccCchhccCCCCCC
Confidence 5444433 111 0 0111222222 1112112234566677899999999863
Q ss_pred CCCCcEEEeeeCCcchhHHHHHHhhcCCCCCEEEEEEcCCCcEEEEeeCCCCeeCCCeecCCceEEEEEcCCceEecCCC
Q 024668 171 ELEEWKLLYHSAMNGLSFNTFLGSISNDEGSAVLIIKDKEGHIYGGYASQPWERHGDFYGDMKSFLFQLYPKLAIYRPTG 250 (264)
Q Consensus 171 ~~~~~~lly~~~~~G~s~~~~~~~~~~~~~p~ll~i~~~~~~vfG~y~~~~~~~~~~~~g~~~~FlF~l~p~~~v~~~~~ 250 (264)
....|+|||+|-.||...++|+.++.+|+||||+|++++++++...-++++|+.+..+||...+-+|++.|+++++..+
T Consensus 295 GeshwtlLY~S~~HG~g~NRf~~~V~gYrgPtlvi~~tkder~~viA~~qew~e~~~~fgG~~~~~f~i~P~f~~~~~s- 373 (483)
T KOG4636|consen 295 GESHWTLLYTSLQHGIGTNRFETLVFGYRGPTLVIFRTKDERVVVIAADQEWRESGNRFGGTFTSFFEIVPNFRRIDGS- 373 (483)
T ss_pred CCCceeecchhhhhccchhhHHHHhccccCCeEEEEEecCCcEEEEeechhhhhhccccccccceeEEeecceEEecCC-
Confidence 2478999999999999999999999999999999999999999999999999999877777777779999999998876
Q ss_pred CCCcEEEEecC
Q 024668 251 ANSNLQWVYVY 261 (264)
Q Consensus 251 ~n~~~~~~~~~ 261 (264)
.|+.|||.-
T Consensus 374 --~N~~Y~nl~ 382 (483)
T KOG4636|consen 374 --ANSIYCNLK 382 (483)
T ss_pred --CceEEEecc
Confidence 789999864
No 10
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=99.47 E-value=1.4e-13 Score=106.16 Aligned_cols=105 Identities=16% Similarity=0.355 Sum_probs=90.9
Q ss_pred ccccccCCCcceeHHHHHHHHHHhh-CCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHH
Q 024668 3 NLVTQKRNDHKLTFEDLVVAKATYE-KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQD 81 (264)
Q Consensus 3 ~~~D~~d~~g~I~f~eF~~~ls~~~-~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
++|.. ||.|.++|++|+.++|.++ .+..+-|+..+|++||-|+|+.|..++|.+++.++-.. +..+..++.
T Consensus 78 e~FSe-DG~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~-------eLs~eEv~~ 149 (189)
T KOG0038|consen 78 EVFSE-DGRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRD-------ELSDEEVEL 149 (189)
T ss_pred HHhcc-CCCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhc-------cCCHHHHHH
Confidence 56884 9999999999999999998 66777899999999999999999999999999887653 222345677
Q ss_pred HHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhcCchhhh
Q 024668 82 IVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTLIPSARK 121 (264)
Q Consensus 82 ~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~~p~~~~ 121 (264)
+++.++.++|.| |||++++.||..++.+.|.+..
T Consensus 150 i~ekvieEAD~D------gDgkl~~~eFe~~i~raPDFls 183 (189)
T KOG0038|consen 150 ICEKVIEEADLD------GDGKLSFAEFEHVILRAPDFLS 183 (189)
T ss_pred HHHHHHHHhcCC------CCCcccHHHHHHHHHhCcchHh
Confidence 888999999764 8999999999999999998764
No 11
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.43 E-value=3.4e-13 Score=107.89 Aligned_cols=96 Identities=16% Similarity=0.304 Sum_probs=81.2
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhhCC-C----HHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccC
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYEKG-T----KDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERG 75 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~~g-~----~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~ 75 (264)
|++.+|. +|+|.|+|+||+..+...... + ..+.++.+|++||.|++|+||.+||+++|..++.
T Consensus 49 ~~~~~D~-dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~----------- 116 (151)
T KOG0027|consen 49 LIKEIDL-DGDGTIDFEEFLDLMEKLGEEKTDEEASSEELKEAFRVFDKDGDGFISASELKKVLTSLGE----------- 116 (151)
T ss_pred HHHHhCC-CCCCeEcHHHHHHHHHhhhcccccccccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCC-----------
Confidence 3567895 999999999999999876632 2 2459999999999999999999999999987654
Q ss_pred CCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhc
Q 024668 76 SNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 115 (264)
Q Consensus 76 ~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~ 115 (264)
....+.++.+++.++.+ +||.|+|++|..++..
T Consensus 117 -~~~~~e~~~mi~~~d~d------~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 117 -KLTDEECKEMIREVDVD------GDGKVNFEEFVKMMSG 149 (151)
T ss_pred -cCCHHHHHHHHHhcCCC------CCCeEeHHHHHHHHhc
Confidence 34578999999999763 8999999999998864
No 12
>KOG2801 consensus Probable Rab-GAPs [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.41 E-value=8.4e-15 Score=125.49 Aligned_cols=98 Identities=22% Similarity=0.368 Sum_probs=89.5
Q ss_pred CcccCCHHHHHHHHhcCCCCC-CCCcEEEeeeCCcchhHHHHHHhhcCCCCCEEEEEEcCCCcEEEEeeCCCCeeCC---
Q 024668 151 SMLLLRKEYAWHIGGALSPHE-LEEWKLLYHSAMNGLSFNTFLGSISNDEGSAVLIIKDKEGHIYGGYASQPWERHG--- 226 (264)
Q Consensus 151 ~~~iL~~~~~~~l~~~lp~~~-~~~~~lly~~~~~G~s~~~~~~~~~~~~~p~ll~i~~~~~~vfG~y~~~~~~~~~--- 226 (264)
.|.|.+-.....||+|.|.+. ..++-|||++-.||+|+.+||-.|.+. .||+++|+|+...|-|||.+..|...+
T Consensus 341 rseivsvremrdiwswvperfalcqplllfsslqhgyslarfyfqcegh-eptllliktmqkevcgaylstdwsernkfg 419 (559)
T KOG2801|consen 341 RSEIVSVREMRDIWSWVPERFALCQPLLLFSSLQHGYSLARFYFQCEGH-EPTLLLIKTMQKEVCGAYLSTDWSERNKFG 419 (559)
T ss_pred hhhhhhHHHHhhHHHhhhHHHhhhhHHHHHHHhhcchhhhhheeeccCC-CCeeehHHHHHHHHhhHhcccchhhhcccC
Confidence 467888777889999999984 788899999999999999999999998 999999999999999999999998643
Q ss_pred ---CeecCCceEEEEEcCCceEecCC
Q 024668 227 ---DFYGDMKSFLFQLYPKLAIYRPT 249 (264)
Q Consensus 227 ---~~~g~~~~FlF~l~p~~~v~~~~ 249 (264)
.|||+++||+|.++|.++-|.|.
T Consensus 420 gklgffgtgecfvfrlqpevqryewv 445 (559)
T KOG2801|consen 420 GKLGFFGTGECFVFRLQPEVQRYEWV 445 (559)
T ss_pred ceecccccccEEEEEechhhheeeEE
Confidence 68999999999999999999885
No 13
>PTZ00183 centrin; Provisional
Probab=99.31 E-value=8.9e-12 Score=99.58 Aligned_cols=98 Identities=16% Similarity=0.186 Sum_probs=72.7
Q ss_pred cccccccCCCcceeHHHHHHHHHHhh-CCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchH
Q 024668 2 FNLVTQKRNDHKLTFEDLVVAKATYE-KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQ 80 (264)
Q Consensus 2 f~~~D~~d~~g~I~f~eF~~~ls~~~-~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~ 80 (264)
|+.+|. +++|.|+|+||+.++.... ....++.++.+|+.+|.+++|.|+.+|+..++..+.. ....
T Consensus 59 ~~~~d~-~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~------------~l~~ 125 (158)
T PTZ00183 59 IADVDK-DGSGKIDFEEFLDIMTKKLGERDPREEILKAFRLFDDDKTGKISLKNLKRVAKELGE------------TITD 125 (158)
T ss_pred HHHhCC-CCCCcEeHHHHHHHHHHHhcCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC------------CCCH
Confidence 566784 8888888888888776654 3445677888888888888888888888877764321 3446
Q ss_pred HHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhcCch
Q 024668 81 DIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTLIPS 118 (264)
Q Consensus 81 ~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~~p~ 118 (264)
..++.++..++. + ++|.|++++|...+...|.
T Consensus 126 ~~~~~~~~~~d~--~----~~g~i~~~ef~~~~~~~~~ 157 (158)
T PTZ00183 126 EELQEMIDEADR--N----GDGEISEEEFYRIMKKTNL 157 (158)
T ss_pred HHHHHHHHHhCC--C----CCCcCcHHHHHHHHhcccC
Confidence 677888888855 3 6788888888888887774
No 14
>PTZ00184 calmodulin; Provisional
Probab=99.26 E-value=2.5e-11 Score=95.81 Aligned_cols=95 Identities=17% Similarity=0.330 Sum_probs=67.1
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhh-CCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCch
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYE-KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSH 79 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~-~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~ 79 (264)
||+.+|. +++|.|+|+||+.++.... ....+++++.+|+.+|.+++|.|+.+|+..++..+.. ...
T Consensus 52 ~~~~~d~-~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~------------~~~ 118 (149)
T PTZ00184 52 MINEVDA-DGNGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGE------------KLT 118 (149)
T ss_pred HHHhcCc-CCCCcCcHHHHHHHHHHhccCCcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCC------------CCC
Confidence 3566774 7788888888887777654 3445667788888888888888888888777765311 244
Q ss_pred HHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhh
Q 024668 80 QDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCT 114 (264)
Q Consensus 80 ~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~ 114 (264)
.+.++.++..++. + ++|.|+++||...+.
T Consensus 119 ~~~~~~~~~~~d~--~----~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 119 DEEVDEMIREADV--D----GDGQINYEEFVKMMM 147 (149)
T ss_pred HHHHHHHHHhcCC--C----CCCcCcHHHHHHHHh
Confidence 5677777877754 3 678888888877654
No 15
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.15 E-value=1.6e-10 Score=90.64 Aligned_cols=95 Identities=18% Similarity=0.212 Sum_probs=80.9
Q ss_pred ccccccCCCcceeHHHHHHHHHHhh-CCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHH
Q 024668 3 NLVTQKRNDHKLTFEDLVVAKATYE-KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQD 81 (264)
Q Consensus 3 ~~~D~~d~~g~I~f~eF~~~ls~~~-~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
..+|+ +|.|.|+|++|+..++... .....+.++-+|+++|.|++|.|+..+|+.+...+.. ..+++
T Consensus 76 ~d~dk-~~~g~i~fe~f~~~mt~k~~e~dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeLge------------nltD~ 142 (172)
T KOG0028|consen 76 ADVDK-EGSGKITFEDFRRVMTVKLGERDTKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGE------------NLTDE 142 (172)
T ss_pred Hhhhh-ccCceechHHHHHHHHHHHhccCcHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCc------------cccHH
Confidence 45785 8999999999999987655 5557888999999999999999999999988776543 56788
Q ss_pred HHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhcC
Q 024668 82 IVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTLI 116 (264)
Q Consensus 82 ~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~~ 116 (264)
.+..|+.+++.| +||.|+-+||...+.+.
T Consensus 143 El~eMIeEAd~d------~dgevneeEF~~imk~t 171 (172)
T KOG0028|consen 143 ELMEMIEEADRD------GDGEVNEEEFIRIMKKT 171 (172)
T ss_pred HHHHHHHHhccc------ccccccHHHHHHHHhcC
Confidence 899999999764 89999999999988764
No 16
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.05 E-value=1.4e-10 Score=79.37 Aligned_cols=66 Identities=12% Similarity=0.299 Sum_probs=54.7
Q ss_pred HHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhh
Q 024668 34 IEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWC 113 (264)
Q Consensus 34 kl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~ 113 (264)
|++.+|+.+|.|++|+|+.+||+.++..+... .....+++.++.+++.+|.+ +||.|+++||..++
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~--------~~~~~~~~~~~~~~~~~D~d------~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRD--------MSDEESDEMIDQIFREFDTD------GDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSH--------STHHHHHHHHHHHHHHHTTT------SSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhccc--------ccHHHHHHHHHHHHHHhCCC------CcCCCcHHHHhccC
Confidence 68899999999999999999999999877532 11135677888889999764 89999999999875
No 17
>PTZ00184 calmodulin; Provisional
Probab=98.89 E-value=8e-09 Score=81.32 Aligned_cols=96 Identities=11% Similarity=0.179 Sum_probs=78.9
Q ss_pred cccccccCCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHH
Q 024668 2 FNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQD 81 (264)
Q Consensus 2 f~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
|..+|. +++|.|+++||..++..+......+.+..+|+.+|.+++|.|+.+|+..++...... .....
T Consensus 17 F~~~D~-~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~-----------~~~~~ 84 (149)
T PTZ00184 17 FSLFDK-DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKD-----------TDSEE 84 (149)
T ss_pred HHHHcC-CCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccC-----------CcHHH
Confidence 778995 999999999999998876655557789999999999999999999998877654321 23456
Q ss_pred HHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhc
Q 024668 82 IVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 115 (264)
Q Consensus 82 ~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~ 115 (264)
.+..+|..+|. + ++|.|+.+||..++..
T Consensus 85 ~~~~~F~~~D~--~----~~g~i~~~e~~~~l~~ 112 (149)
T PTZ00184 85 EIKEAFKVFDR--D----GNGFISAAELRHVMTN 112 (149)
T ss_pred HHHHHHHhhCC--C----CCCeEeHHHHHHHHHH
Confidence 77888999966 4 8899999999998865
No 18
>PTZ00183 centrin; Provisional
Probab=98.87 E-value=9.9e-09 Score=81.84 Aligned_cols=97 Identities=11% Similarity=0.124 Sum_probs=78.9
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchH
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQ 80 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~ 80 (264)
+|..+|. +++|.|+++||..++..+......+.+..+|+.+|.+++|.|+.+|+..++...... ...+
T Consensus 22 ~F~~~D~-~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~-----------~~~~ 89 (158)
T PTZ00183 22 AFDLFDT-DGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGE-----------RDPR 89 (158)
T ss_pred HHHHhCC-CCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcC-----------CCcH
Confidence 3778995 999999999999999876444456789999999999999999999998877643321 2335
Q ss_pred HHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhc
Q 024668 81 DIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 115 (264)
Q Consensus 81 ~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~ 115 (264)
+.++.+|+.+|. + ++|.|+.+||..++..
T Consensus 90 ~~l~~~F~~~D~--~----~~G~i~~~e~~~~l~~ 118 (158)
T PTZ00183 90 EEILKAFRLFDD--D----KTGKISLKNLKRVAKE 118 (158)
T ss_pred HHHHHHHHHhCC--C----CCCcCcHHHHHHHHHH
Confidence 678888999966 4 8999999999999875
No 19
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.82 E-value=1.2e-08 Score=74.15 Aligned_cols=66 Identities=15% Similarity=0.172 Sum_probs=54.9
Q ss_pred HHHHHhhhhccc-CCCCccCHHHHHHHHHHHHHHHhcccccccCCCchH-HHHHHHHHhcccccCCcCCCCCCCCHHHHH
Q 024668 33 EIEEFIYQLLDV-NDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQ-DIVDVFLNAATFSKNGERSSNKSMSFEDFR 110 (264)
Q Consensus 33 ekl~~~F~~~D~-d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~-~~v~~l~~~~d~d~~~~~~~dg~is~eeF~ 110 (264)
..++.+|+.||. +++|.|+.+||+.++..-++. ..+. +.++.+++.+|. + +||.|+|+||.
T Consensus 8 ~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~-----------~ls~~~~v~~mi~~~D~--d----~DG~I~F~EF~ 70 (89)
T cd05022 8 ETLVSNFHKASVKGGKESLTASEFQELLTQQLPH-----------LLKDVEGLEEKMKNLDV--N----QDSKLSFEEFW 70 (89)
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhh-----------hccCHHHHHHHHHHhCC--C----CCCCCcHHHHH
Confidence 468899999999 999999999999999883331 1223 679999999966 4 89999999999
Q ss_pred Hhhhc
Q 024668 111 SWCTL 115 (264)
Q Consensus 111 ~~~~~ 115 (264)
..+.+
T Consensus 71 ~l~~~ 75 (89)
T cd05022 71 ELIGE 75 (89)
T ss_pred HHHHH
Confidence 98876
No 20
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=98.82 E-value=2.4e-08 Score=79.84 Aligned_cols=101 Identities=13% Similarity=0.196 Sum_probs=84.6
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchH
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQ 80 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~ 80 (264)
.|+.||+ +++|.|+-.|+...+..+.....++.++.+++-+|.|++|.|+.+||..++...... ........
T Consensus 13 ~F~~fD~-d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~-------~~~~~~~~ 84 (151)
T KOG0027|consen 13 AFQLFDK-DGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEE-------KTDEEASS 84 (151)
T ss_pred HHHHHCC-CCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcc-------cccccccH
Confidence 3789996 999999999999999999888888999999999999999999999999988876542 10001235
Q ss_pred HHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhc
Q 024668 81 DIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 115 (264)
Q Consensus 81 ~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~ 115 (264)
+.+...|+.+|. + ++|.||.+|+...+..
T Consensus 85 ~el~eaF~~fD~--d----~~G~Is~~el~~~l~~ 113 (151)
T KOG0027|consen 85 EELKEAFRVFDK--D----GDGFISASELKKVLTS 113 (151)
T ss_pred HHHHHHHHHHcc--C----CCCcCcHHHHHHHHHH
Confidence 577888999966 4 8999999999998886
No 21
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=98.76 E-value=7.5e-09 Score=89.89 Aligned_cols=108 Identities=17% Similarity=0.236 Sum_probs=87.8
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhh-CCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCch
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYE-KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSH 79 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~-~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~ 79 (264)
+|.+||. +++|.+||.|.+.+++.+| .....+.++.+|++|+.+.||.++.++|.-+++..++. .
T Consensus 264 ~f~LFde-~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~lgv-----------~-- 329 (412)
T KOG4666|consen 264 TFMLFDE-GTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQVVLGV-----------E-- 329 (412)
T ss_pred hhheecC-CCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccchHHHHHHHHHhcCc-----------c--
Confidence 5889995 9999999999999999999 55568999999999999999999999998888876652 1
Q ss_pred HHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhcCchhhhhhhcccC
Q 024668 80 QDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTLIPSARKFLGGLLT 128 (264)
Q Consensus 80 ~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~~p~~~~~l~~ll~ 128 (264)
.-.+-.+|.+.+. . .+|+|++++|.++..+.|.+......++-
T Consensus 330 ~l~v~~lf~~i~q--~----d~~ki~~~~f~~fa~~~p~~a~~~~~yld 372 (412)
T KOG4666|consen 330 VLRVPVLFPSIEQ--K----DDPKIYASNFRKFAATEPNLALSELGYLD 372 (412)
T ss_pred eeeccccchhhhc--c----cCcceeHHHHHHHHHhCchhhhhhhcccc
Confidence 1134566777754 2 58999999999999999998865444443
No 22
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.71 E-value=2.4e-08 Score=82.52 Aligned_cols=98 Identities=12% Similarity=0.281 Sum_probs=76.6
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchH
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQ 80 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~ 80 (264)
|..+||. +.+|+|+|+||... ....+ .=+.+|+-||.|++|.|+..||++++..+. ...+.
T Consensus 99 mI~mfd~-~~~G~i~f~EF~~L-w~~i~-----~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~G------------y~Lsp 159 (221)
T KOG0037|consen 99 MISMFDR-DNSGTIGFKEFKAL-WKYIN-----QWRNVFRTYDRDRSGTIDSSELRQALTQLG------------YRLSP 159 (221)
T ss_pred HHHHhcC-CCCCccCHHHHHHH-HHHHH-----HHHHHHHhcccCCCCcccHHHHHHHHHHcC------------cCCCH
Confidence 4567885 88999999999874 33333 347899999999999999999999887653 35667
Q ss_pred HHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhcCchhhhhh
Q 024668 81 DIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTLIPSARKFL 123 (264)
Q Consensus 81 ~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~~p~~~~~l 123 (264)
+..+.++++.+. . ++|.|.|++|++.+..-+.+.+.+
T Consensus 160 q~~~~lv~kyd~--~----~~g~i~FD~FI~ccv~L~~lt~~F 196 (221)
T KOG0037|consen 160 QFYNLLVRKYDR--F----GGGRIDFDDFIQCCVVLQRLTEAF 196 (221)
T ss_pred HHHHHHHHHhcc--c----cCCceeHHHHHHHHHHHHHHHHHH
Confidence 888899999953 2 589999999999998766655544
No 23
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.70 E-value=1.1e-08 Score=69.76 Aligned_cols=58 Identities=19% Similarity=0.319 Sum_probs=49.9
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhhC----CCHHHHHHHhhhhcccCCCCccCHHHHHHHH
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYEK----GTKDEIEEFIYQLLDVNDDGVLGRSDLESVV 59 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~~----g~~~ekl~~~F~~~D~d~~G~It~~El~~~l 59 (264)
+|+.+|+ |++|.|+.+||..++..+.. ...++.++.+|+.+|.|++|.|+.+|+.+++
T Consensus 5 ~F~~~D~-d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 5 AFKKFDK-DGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHST-TSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred HHHHHcC-CccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 4889995 99999999999999998763 2235678888999999999999999998864
No 24
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.69 E-value=5e-08 Score=70.76 Aligned_cols=70 Identities=14% Similarity=0.277 Sum_probs=55.7
Q ss_pred HHHHHhhhhcc-cCCCC-ccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHH
Q 024668 33 EIEEFIYQLLD-VNDDG-VLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFR 110 (264)
Q Consensus 33 ekl~~~F~~~D-~d~~G-~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~ 110 (264)
..++.+|+.|| .||+| .|+.+||+.+|.+-++.+. +....++.++.+++.+|. + +||.|+|+||.
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~l-------g~~~~~~~v~~~i~~~D~--n----~dG~v~f~eF~ 74 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFL-------EEIKEQEVVDKVMETLDS--D----GDGECDFQEFM 74 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHh-------cCCCCHHHHHHHHHHhCC--C----CCCcCcHHHHH
Confidence 46889999998 79999 5999999999987443221 123456789999999965 4 89999999999
Q ss_pred Hhhhc
Q 024668 111 SWCTL 115 (264)
Q Consensus 111 ~~~~~ 115 (264)
.++..
T Consensus 75 ~li~~ 79 (88)
T cd05027 75 AFVAM 79 (88)
T ss_pred HHHHH
Confidence 88764
No 25
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.68 E-value=8.3e-08 Score=70.37 Aligned_cols=70 Identities=19% Similarity=0.276 Sum_probs=55.1
Q ss_pred HHHHHhhhhcc-cCCCC-ccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHH
Q 024668 33 EIEEFIYQLLD-VNDDG-VLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFR 110 (264)
Q Consensus 33 ekl~~~F~~~D-~d~~G-~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~ 110 (264)
..++.+|..|| .||+| .|+.+||++++...+..... .......++.+++.+|. + +||.|+|+||.
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~-------~~~~~~~v~~i~~elD~--n----~dG~Idf~EF~ 76 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLS-------SQKDPMLVDKIMNDLDS--N----KDNEVDFNEFV 76 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcc-------cccCHHHHHHHHHHhCC--C----CCCCCCHHHHH
Confidence 45778899999 78998 59999999999875432111 12356789999999966 4 89999999999
Q ss_pred Hhhhc
Q 024668 111 SWCTL 115 (264)
Q Consensus 111 ~~~~~ 115 (264)
.++..
T Consensus 77 ~l~~~ 81 (93)
T cd05026 77 VLVAA 81 (93)
T ss_pred HHHHH
Confidence 98875
No 26
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=98.68 E-value=5.2e-08 Score=87.29 Aligned_cols=93 Identities=14% Similarity=0.265 Sum_probs=70.0
Q ss_pred cccccccCCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHH
Q 024668 2 FNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQD 81 (264)
Q Consensus 2 f~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
|+..|. |.+|.+||+||...+.. .|.++...|+..|.+.||.|..+|+.+.+..+.. +..++
T Consensus 57 ~~~~d~-~~dg~vDy~eF~~Y~~~-----~E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi------------~l~de 118 (463)
T KOG0036|consen 57 FSAMDA-NRDGRVDYSEFKRYLDN-----KELELYRIFQSIDLEHDGKIDPNEIWRYLKDLGI------------QLSDE 118 (463)
T ss_pred HHhccc-CcCCcccHHHHHHHHHH-----hHHHHHHHHhhhccccCCccCHHHHHHHHHHhCC------------ccCHH
Confidence 556674 77777777777776665 5667777777777777777777777776665432 46678
Q ss_pred HHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhcCch
Q 024668 82 IVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTLIPS 118 (264)
Q Consensus 82 ~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~~p~ 118 (264)
.++.+++.+|. + +++.|+++||.+.+..+|.
T Consensus 119 ~~~k~~e~~d~--~----g~~~I~~~e~rd~~ll~p~ 149 (463)
T KOG0036|consen 119 KAAKFFEHMDK--D----GKATIDLEEWRDHLLLYPE 149 (463)
T ss_pred HHHHHHHHhcc--C----CCeeeccHHHHhhhhcCCh
Confidence 88999999966 4 8899999999999999883
No 27
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.64 E-value=1.6e-07 Score=68.71 Aligned_cols=71 Identities=15% Similarity=0.251 Sum_probs=56.3
Q ss_pred HHHHHHhhhhcc-cCCCCc-cCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHH
Q 024668 32 DEIEEFIYQLLD-VNDDGV-LGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDF 109 (264)
Q Consensus 32 ~ekl~~~F~~~D-~d~~G~-It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF 109 (264)
.+.++.+|++|| .|++|+ |+.+||+.++...++... +...+++.++.+++.+|. + ++|.|+|+||
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~-------~~~~s~~~v~~i~~~~D~--d----~~G~I~f~eF 74 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFL-------DAQKDADAVDKIMKELDE--N----GDGEVDFQEF 74 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHc-------cCCCCHHHHHHHHHHHCC--C----CCCcCcHHHH
Confidence 467999999997 999994 999999999976333211 112456789999999966 4 7999999999
Q ss_pred HHhhhc
Q 024668 110 RSWCTL 115 (264)
Q Consensus 110 ~~~~~~ 115 (264)
..++..
T Consensus 75 ~~l~~~ 80 (92)
T cd05025 75 VVLVAA 80 (92)
T ss_pred HHHHHH
Confidence 998875
No 28
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.60 E-value=1.9e-07 Score=68.57 Aligned_cols=71 Identities=17% Similarity=0.196 Sum_probs=55.9
Q ss_pred HHHHHHhhhhccc-CC-CCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHH
Q 024668 32 DEIEEFIYQLLDV-ND-DGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDF 109 (264)
Q Consensus 32 ~ekl~~~F~~~D~-d~-~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF 109 (264)
...++.+|+.||. |+ +|.|+.+||+.++...++.. .+....++.++.+++.++. + ++|.|+++||
T Consensus 7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~-------lg~~~s~~ei~~~~~~~D~--~----~dg~I~f~eF 73 (94)
T cd05031 7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEF-------LKNQKDPMAVDKIMKDLDQ--N----RDGKVNFEEF 73 (94)
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHH-------hhccccHHHHHHHHHHhCC--C----CCCcCcHHHH
Confidence 4578999999997 97 69999999999998643310 1123456789999999966 4 8999999999
Q ss_pred HHhhhc
Q 024668 110 RSWCTL 115 (264)
Q Consensus 110 ~~~~~~ 115 (264)
+..+..
T Consensus 74 ~~l~~~ 79 (94)
T cd05031 74 VSLVAG 79 (94)
T ss_pred HHHHHH
Confidence 988875
No 29
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=98.60 E-value=2.7e-07 Score=73.77 Aligned_cols=95 Identities=9% Similarity=0.134 Sum_probs=81.0
Q ss_pred cccccccCCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHH
Q 024668 2 FNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQD 81 (264)
Q Consensus 2 f~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
|+.+|+ +++|.|+..++..++..+-.+..+.-+..+|..+|. |+|.|+..+|..+|..... ....++
T Consensus 26 F~l~D~-d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~-----------~~~~~E 92 (160)
T COG5126 26 FQLFDR-DSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLK-----------RGDKEE 92 (160)
T ss_pred HHHhCc-CCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhc-----------cCCcHH
Confidence 788996 999999999999999976677788899999999999 9999999999888766543 135577
Q ss_pred HHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhc
Q 024668 82 IVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 115 (264)
Q Consensus 82 ~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~ 115 (264)
.+...|+.+|. + +||.|+..+.+.++..
T Consensus 93 el~~aF~~fD~--d----~dG~Is~~eL~~vl~~ 120 (160)
T COG5126 93 ELREAFKLFDK--D----HDGYISIGELRRVLKS 120 (160)
T ss_pred HHHHHHHHhCC--C----CCceecHHHHHHHHHh
Confidence 88888999965 4 8999999999999984
No 30
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=98.59 E-value=2.9e-07 Score=70.87 Aligned_cols=84 Identities=19% Similarity=0.263 Sum_probs=69.7
Q ss_pred cceeHHHHHHHHHHhhC---CCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHH
Q 024668 12 HKLTFEDLVVAKATYEK---GTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLN 88 (264)
Q Consensus 12 g~I~f~eF~~~ls~~~~---g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~ 88 (264)
..|+|++|+-+++.+.+ +...+....-.+.||++++|.|...||+++|..++. ...++.++.+++
T Consensus 64 ~rl~FE~fLpm~q~vaknk~q~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGe------------kl~eeEVe~Lla 131 (152)
T KOG0030|consen 64 KRLDFEEFLPMYQQVAKNKDQGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGE------------KLTEEEVEELLA 131 (152)
T ss_pred hhhhHHHHHHHHHHHHhccccCcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHh------------hccHHHHHHHHc
Confidence 57899999999988873 334567777899999999999999999999998875 466889999888
Q ss_pred hcccccCCcCCCCCCCCHHHHHHhhh
Q 024668 89 AATFSKNGERSSNKSMSFEDFRSWCT 114 (264)
Q Consensus 89 ~~d~d~~~~~~~dg~is~eeF~~~~~ 114 (264)
... + .+|.|.|+.|.+.+.
T Consensus 132 g~e---D----~nG~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 132 GQE---D----SNGCINYEAFVKHIM 150 (152)
T ss_pred ccc---c----cCCcCcHHHHHHHHh
Confidence 763 2 789999999987654
No 31
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.51 E-value=4.8e-07 Score=65.44 Aligned_cols=71 Identities=14% Similarity=0.214 Sum_probs=56.0
Q ss_pred HHHHHhhhhccc--CCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHH
Q 024668 33 EIEEFIYQLLDV--NDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFR 110 (264)
Q Consensus 33 ekl~~~F~~~D~--d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~ 110 (264)
+.++.+|++||. |++|.|+.+||..++...++. ..+....++.++.++..++. + ++|.|++++|.
T Consensus 8 ~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~-------~~~~~~~~~ei~~i~~~~d~--~----~~g~I~f~eF~ 74 (88)
T cd00213 8 ETIIDVFHKYSGKEGDKDTLSKKELKELLETELPN-------FLKNQKDPEAVDKIMKDLDV--N----KDGKVDFQEFL 74 (88)
T ss_pred HHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhh-------hccCCCCHHHHHHHHHHhcc--C----CCCcCcHHHHH
Confidence 568889999999 899999999999999764332 11112457789999999965 3 78999999999
Q ss_pred HhhhcC
Q 024668 111 SWCTLI 116 (264)
Q Consensus 111 ~~~~~~ 116 (264)
.++...
T Consensus 75 ~~~~~~ 80 (88)
T cd00213 75 VLIGKL 80 (88)
T ss_pred HHHHHH
Confidence 988753
No 32
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=98.50 E-value=9.5e-07 Score=69.21 Aligned_cols=87 Identities=13% Similarity=0.184 Sum_probs=71.2
Q ss_pred CCcceeHHHHHHHHHHhh-CCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHH
Q 024668 10 NDHKLTFEDLVVAKATYE-KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLN 88 (264)
Q Consensus 10 ~~g~I~f~eF~~~ls~~~-~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~ 88 (264)
..|-|+|.-|+.++...+ ...+++-+..||++||.+++|.|..+.|+++|..... +...+.|+.+++
T Consensus 77 a~gPINft~FLTmfGekL~gtdpe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gD------------r~~~eEV~~m~r 144 (171)
T KOG0031|consen 77 APGPINFTVFLTMFGEKLNGTDPEEVILNAFKTFDDEGSGKIDEDYLRELLTTMGD------------RFTDEEVDEMYR 144 (171)
T ss_pred CCCCeeHHHHHHHHHHHhcCCCHHHHHHHHHHhcCccCCCccCHHHHHHHHHHhcc------------cCCHHHHHHHHH
Confidence 456667777777765544 4456889999999999999999999999999987543 577899999999
Q ss_pred hcccccCCcCCCCCCCCHHHHHHhhh
Q 024668 89 AATFSKNGERSSNKSMSFEDFRSWCT 114 (264)
Q Consensus 89 ~~d~d~~~~~~~dg~is~eeF~~~~~ 114 (264)
.+-.| ..|.+.|..|...+.
T Consensus 145 ~~p~d------~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 145 EAPID------KKGNFDYKAFTYIIT 164 (171)
T ss_pred hCCcc------cCCceeHHHHHHHHH
Confidence 99664 679999999998876
No 33
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=98.48 E-value=1.2e-06 Score=69.11 Aligned_cols=98 Identities=15% Similarity=0.110 Sum_probs=75.7
Q ss_pred cccccccCCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHH
Q 024668 2 FNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQD 81 (264)
Q Consensus 2 f~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
|..|| .+++|.|+.+|+-.++..+-.....+.+..+-.=+|++|.|.|+.++|+.++...+.. ..+.+
T Consensus 39 f~lfd-~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e-----------~dt~e 106 (172)
T KOG0028|consen 39 FELFD-PDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGE-----------RDTKE 106 (172)
T ss_pred HHhhc-cCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhc-----------cCcHH
Confidence 67899 5999999999997766665433333444445555789999999999999988765542 34678
Q ss_pred HHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhc-Cc
Q 024668 82 IVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL-IP 117 (264)
Q Consensus 82 ~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~-~p 117 (264)
.+...|+..|.| ++|+||+.+|+..... .|
T Consensus 107 Ei~~afrl~D~D------~~Gkis~~~lkrvakeLge 137 (172)
T KOG0028|consen 107 EIKKAFRLFDDD------KTGKISQRNLKRVAKELGE 137 (172)
T ss_pred HHHHHHHccccc------CCCCcCHHHHHHHHHHhCc
Confidence 888999999764 7899999999988876 55
No 34
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.45 E-value=5.8e-07 Score=68.44 Aligned_cols=62 Identities=18% Similarity=0.399 Sum_probs=51.9
Q ss_pred HHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHH
Q 024668 32 DEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRS 111 (264)
Q Consensus 32 ~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~ 111 (264)
..++.++|..+|.|+||.|+.+||..+. + ...+..++.+|+.+|. + +||.||++||..
T Consensus 47 ~~~l~w~F~~lD~d~DG~Ls~~EL~~~~---l-------------~~~e~~~~~f~~~~D~--n----~Dg~IS~~Ef~~ 104 (116)
T cd00252 47 KDPVGWMFNQLDGNYDGKLSHHELAPIR---L-------------DPNEHCIKPFFESCDL--D----KDGSISLDEWCY 104 (116)
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHH---c-------------cchHHHHHHHHHHHCC--C----CCCCCCHHHHHH
Confidence 4689999999999999999999999765 1 1235678899999976 4 899999999999
Q ss_pred hhhc
Q 024668 112 WCTL 115 (264)
Q Consensus 112 ~~~~ 115 (264)
.+.+
T Consensus 105 cl~~ 108 (116)
T cd00252 105 CFIK 108 (116)
T ss_pred HHhC
Confidence 9844
No 35
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.45 E-value=7.6e-07 Score=64.56 Aligned_cols=68 Identities=12% Similarity=0.269 Sum_probs=54.4
Q ss_pred HHHHHhhhhccc-CC-CCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHH
Q 024668 33 EIEEFIYQLLDV-ND-DGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFR 110 (264)
Q Consensus 33 ekl~~~F~~~D~-d~-~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~ 110 (264)
..+-.+|..||. || +|+|+.+||++++..... .+...+++.++.+++.+|. + ++|+|+|+||.
T Consensus 10 ~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~---------lg~k~t~~ev~~m~~~~D~--d----~dG~Idf~EFv 74 (88)
T cd05029 10 GLLVAIFHKYSGREGDKNTLSKKELKELIQKELT---------IGSKLQDAEIAKLMEDLDR--N----KDQEVNFQEYV 74 (88)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHh---------cCCCCCHHHHHHHHHHhcC--C----CCCCCcHHHHH
Confidence 457788999997 77 899999999999865221 1224567899999999966 4 89999999999
Q ss_pred Hhhhc
Q 024668 111 SWCTL 115 (264)
Q Consensus 111 ~~~~~ 115 (264)
.++..
T Consensus 75 ~lm~~ 79 (88)
T cd05029 75 TFLGA 79 (88)
T ss_pred HHHHH
Confidence 88875
No 36
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.44 E-value=1.1e-06 Score=63.93 Aligned_cols=70 Identities=16% Similarity=0.253 Sum_probs=55.5
Q ss_pred HHHHHhhhh-cccCCCC-ccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHH
Q 024668 33 EIEEFIYQL-LDVNDDG-VLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFR 110 (264)
Q Consensus 33 ekl~~~F~~-~D~d~~G-~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~ 110 (264)
+.+..+|+. .|.||+| .|+.+||+.++...+..... .......++.+++.+|. + +||.|+|+||.
T Consensus 9 ~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~-------~~~~~~~~~~ll~~~D~--d----~DG~I~f~EF~ 75 (89)
T cd05023 9 ESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTK-------NQKDPGVLDRMMKKLDL--N----SDGQLDFQEFL 75 (89)
T ss_pred HHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhc-------CCCCHHHHHHHHHHcCC--C----CCCcCcHHHHH
Confidence 578889999 6788876 99999999999887653222 12345688999999966 4 89999999999
Q ss_pred Hhhhc
Q 024668 111 SWCTL 115 (264)
Q Consensus 111 ~~~~~ 115 (264)
.++..
T Consensus 76 ~l~~~ 80 (89)
T cd05023 76 NLIGG 80 (89)
T ss_pred HHHHH
Confidence 98875
No 37
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.39 E-value=8.9e-07 Score=60.16 Aligned_cols=62 Identities=16% Similarity=0.262 Sum_probs=50.5
Q ss_pred HHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhc
Q 024668 36 EFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 115 (264)
Q Consensus 36 ~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~ 115 (264)
+.+|+.+|.|++|.|+.+|++.++.... ..++.++.++..++. + ++|.|+++||..++..
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g--------------~~~~~~~~i~~~~d~--~----~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSG--------------LPRSVLAQIWDLADT--D----KDGKLDKEEFAIAMHL 61 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcC--------------CCHHHHHHHHHHhcC--C----CCCcCCHHHHHHHHHH
Confidence 5689999999999999999999886531 245678889999865 3 7899999999998875
Q ss_pred Cc
Q 024668 116 IP 117 (264)
Q Consensus 116 ~p 117 (264)
.+
T Consensus 62 ~~ 63 (67)
T cd00052 62 IA 63 (67)
T ss_pred HH
Confidence 43
No 38
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.37 E-value=1.3e-06 Score=64.31 Aligned_cols=65 Identities=20% Similarity=0.321 Sum_probs=53.8
Q ss_pred HHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHH
Q 024668 32 DEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRS 111 (264)
Q Consensus 32 ~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~ 111 (264)
.++++.+|+.+|.|++|.|+.+|+++++... ...++.++.++..++. + ++|.|+++||+.
T Consensus 9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~--------------~~~~~ev~~i~~~~d~--~----~~g~I~~~eF~~ 68 (96)
T smart00027 9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLKS--------------GLPQTLLAKIWNLADI--D----NDGELDKDEFAL 68 (96)
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHc--------------CCCHHHHHHHHHHhcC--C----CCCCcCHHHHHH
Confidence 4689999999999999999999999988652 1345678889999865 3 789999999998
Q ss_pred hhhcC
Q 024668 112 WCTLI 116 (264)
Q Consensus 112 ~~~~~ 116 (264)
++...
T Consensus 69 ~~~~~ 73 (96)
T smart00027 69 AMHLI 73 (96)
T ss_pred HHHHH
Confidence 88743
No 39
>PLN02964 phosphatidylserine decarboxylase
Probab=98.35 E-value=5.3e-07 Score=86.83 Aligned_cols=60 Identities=18% Similarity=0.360 Sum_probs=54.5
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHH
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIA 61 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~ 61 (264)
||+.+|. |++|.|+|+||+.++..+.....++.++.+|+.+|.|++|.|+.+||.+++..
T Consensus 184 mf~~~D~-DgdG~IdfdEFl~lL~~lg~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 184 ILAIVDY-DEDGQLSFSEFSDLIKAFGNLVAANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred HHHHhCC-CCCCeEcHHHHHHHHHHhccCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 4778995 99999999999999998766667889999999999999999999999999877
No 40
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.30 E-value=1.5e-06 Score=57.07 Aligned_cols=61 Identities=16% Similarity=0.372 Sum_probs=50.6
Q ss_pred HHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhh
Q 024668 35 EEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWC 113 (264)
Q Consensus 35 l~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~ 113 (264)
++.+|+.+|.+++|.|+.+|+..++..+.. +...+.+..++..++. + ++|.|++++|..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~------------~~~~~~~~~~~~~~~~--~----~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGE------------GLSEEEIDEMIREVDK--D----GDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCC------------CCCHHHHHHHHHHhCC--C----CCCeEeHHHHHHHh
Confidence 577899999999999999999998876531 4557788889999965 3 78999999998875
No 41
>PLN02964 phosphatidylserine decarboxylase
Probab=98.27 E-value=2.7e-06 Score=82.02 Aligned_cols=93 Identities=18% Similarity=0.333 Sum_probs=69.4
Q ss_pred cccccccCCCcceeHHHHHHHHHHhhCCCHHHH--HHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCch
Q 024668 2 FNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEI--EEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSH 79 (264)
Q Consensus 2 f~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ek--l~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~ 79 (264)
|+.+|+ |++|.| ....+..+.. ...+.+++ ++.+|+.+|.|++|.|+.+||..++..+.. ...
T Consensus 149 F~lfD~-dgdG~i-Lg~ilrslG~-~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~------------~~s 213 (644)
T PLN02964 149 FDLLDP-SSSNKV-VGSIFVSCSI-EDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGN------------LVA 213 (644)
T ss_pred HHHHCC-CCCCcC-HHHHHHHhCC-CCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcc------------CCC
Confidence 788995 999997 3333332221 12233332 799999999999999999999998875421 245
Q ss_pred HHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhc
Q 024668 80 QDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 115 (264)
Q Consensus 80 ~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~ 115 (264)
++.+..+|+.+|. + ++|.|+++|+.+.+..
T Consensus 214 eEEL~eaFk~fDk--D----gdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 214 ANKKEELFKAADL--N----GDGVVTIDELAALLAL 243 (644)
T ss_pred HHHHHHHHHHhCC--C----CCCcCCHHHHHHHHHh
Confidence 6789999999966 4 8999999999988777
No 42
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.24 E-value=3.2e-06 Score=55.21 Aligned_cols=52 Identities=19% Similarity=0.273 Sum_probs=44.1
Q ss_pred CCcceeHHHHHHHHHHhhCC-CHHHHHHHhhhhcccCCCCccCHHHHHHHHHH
Q 024668 10 NDHKLTFEDLVVAKATYEKG-TKDEIEEFIYQLLDVNDDGVLGRSDLESVVIA 61 (264)
Q Consensus 10 ~~g~I~f~eF~~~ls~~~~g-~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~ 61 (264)
.+|.|+.++|..++..+... -.++.+..+|+.+|.|++|.|+.+||..++..
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 37999999999999666433 44556999999999999999999999988764
No 43
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.23 E-value=2e-06 Score=56.45 Aligned_cols=58 Identities=17% Similarity=0.318 Sum_probs=51.3
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHH
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVV 59 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l 59 (264)
+|+.+|. +++|.|+++||..++..+......+.+..+|+.+|.+++|.|+.+|+..++
T Consensus 5 ~f~~~d~-~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 5 AFRLFDK-DGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHhCC-CCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 4778995 999999999999999987766778888999999999999999999997754
No 44
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.22 E-value=2.6e-06 Score=74.48 Aligned_cols=89 Identities=17% Similarity=0.268 Sum_probs=66.6
Q ss_pred ccccccCCCcceeHHHHHHHHHHhhCCCHH-----HHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCC
Q 024668 3 NLVTQKRNDHKLTFEDLVVAKATYEKGTKD-----EIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSN 77 (264)
Q Consensus 3 ~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~-----ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~ 77 (264)
.-+|+ ||||+|+++||+.-|..-...+.+ ..-+..+..+|+|+||+++.+|++..+. .....
T Consensus 207 ~d~Dk-n~DG~I~~eEfigd~~~~~~~~~epeWv~~Ere~F~~~~DknkDG~L~~dEl~~WI~------------P~~~d 273 (325)
T KOG4223|consen 207 EDIDK-NGDGKISLEEFIGDLYSHEGNEEEPEWVLTEREQFFEFRDKNKDGKLDGDELLDWIL------------PSEQD 273 (325)
T ss_pred hhccc-CCCCceeHHHHHhHHhhccCCCCCcccccccHHHHHHHhhcCCCCccCHHHHhcccC------------CCCcc
Confidence 35796 999999999999998775532221 1223667888999999999999986542 11223
Q ss_pred chHHHHHHHHHhcccccCCcCCCCCCCCHHHHH
Q 024668 78 SHQDIVDVFLNAATFSKNGERSSNKSMSFEDFR 110 (264)
Q Consensus 78 ~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~ 110 (264)
..+..++.++.++|. + +||++|++|.+
T Consensus 274 ~A~~EA~hL~~eaD~--d----kD~kLs~eEIl 300 (325)
T KOG4223|consen 274 HAKAEARHLLHEADE--D----KDGKLSKEEIL 300 (325)
T ss_pred HHHHHHHHHhhhhcc--C----ccccccHHHHh
Confidence 457889999999966 4 89999999954
No 45
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.14 E-value=6e-06 Score=55.99 Aligned_cols=60 Identities=15% Similarity=0.252 Sum_probs=51.0
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHH
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAML 63 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~ 63 (264)
+|+.+|+ +++|.|+.+|+..++... |-.++.++.+|+.+|.+++|.|+.+|+..++..+.
T Consensus 4 ~F~~~D~-~~~G~i~~~el~~~l~~~--g~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~~ 63 (67)
T cd00052 4 IFRSLDP-DGDGLISGDEARPFLGKS--GLPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLIA 63 (67)
T ss_pred HHHHhCC-CCCCcCcHHHHHHHHHHc--CCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHH
Confidence 4788995 999999999999998764 44567789999999999999999999988776543
No 46
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=98.13 E-value=1.8e-06 Score=49.07 Aligned_cols=27 Identities=11% Similarity=0.262 Sum_probs=22.0
Q ss_pred HHHhhhhcccCCCCccCHHHHHHHHHH
Q 024668 35 EEFIYQLLDVNDDGVLGRSDLESVVIA 61 (264)
Q Consensus 35 l~~~F~~~D~d~~G~It~~El~~~l~~ 61 (264)
++.+|+.+|+|+||+|+.+||+.++..
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 567888888888888888888887764
No 47
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=98.13 E-value=1.1e-05 Score=66.66 Aligned_cols=89 Identities=12% Similarity=0.220 Sum_probs=74.0
Q ss_pred CCCcceeHHHHHHHHHHhh-CCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHH
Q 024668 9 RNDHKLTFEDLVVAKATYE-KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFL 87 (264)
Q Consensus 9 d~~g~I~f~eF~~~ls~~~-~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~ 87 (264)
.-+|.++-++|...++.+. .++.+.-.+.+|+.+|.|+||.|+.+|+...+..+.. ...++..+-.|
T Consensus 39 cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~r------------Gt~eekl~w~F 106 (193)
T KOG0044|consen 39 CPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSR------------GTLEEKLKWAF 106 (193)
T ss_pred CCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcC------------CcHHHHhhhhh
Confidence 3589999999999999887 6888999999999999999999999997666554433 35567777778
Q ss_pred HhcccccCCcCCCCCCCCHHHHHHhhhc
Q 024668 88 NAATFSKNGERSSNKSMSFEDFRSWCTL 115 (264)
Q Consensus 88 ~~~d~d~~~~~~~dg~is~eeF~~~~~~ 115 (264)
+..|. + +||.|+++|+...+..
T Consensus 107 ~lyD~--d----gdG~It~~Eml~iv~~ 128 (193)
T KOG0044|consen 107 RLYDL--D----GDGYITKEEMLKIVQA 128 (193)
T ss_pred eeecC--C----CCceEcHHHHHHHHHH
Confidence 88866 4 8999999999888774
No 48
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=98.12 E-value=5.1e-06 Score=75.18 Aligned_cols=107 Identities=14% Similarity=0.198 Sum_probs=67.9
Q ss_pred CCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHH--Hhccccccc-CCCchHHHHHH
Q 024668 9 RNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEI--IFSMEISER-GSNSHQDIVDV 85 (264)
Q Consensus 9 d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~--~~~~~~~~~-~~~~~~~~v~~ 85 (264)
+.+|-|+|.||+-.+..+.. ++.-.+.||+|||.||||.|+.+||..+...+..- ++.-..... +.......++.
T Consensus 211 g~~GLIsfSdYiFLlTlLS~--p~~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~ns 288 (489)
T KOG2643|consen 211 GESGLISFSDYIFLLTLLSI--PERNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNS 288 (489)
T ss_pred CCCCeeeHHHHHHHHHHHcc--CcccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhh
Confidence 67999999999998888753 44567899999999999999999998876443221 000000000 01111223333
Q ss_pred HHHhcccccCCcCCCCCCCCHHHHHHhhhc-Cchhhh
Q 024668 86 FLNAATFSKNGERSSNKSMSFEDFRSWCTL-IPSARK 121 (264)
Q Consensus 86 l~~~~d~d~~~~~~~dg~is~eeF~~~~~~-~p~~~~ 121 (264)
-+....+-++ +++++++++|.+++.. ..++++
T Consensus 289 aL~~yFFG~r----g~~kLs~deF~~F~e~Lq~Eil~ 321 (489)
T KOG2643|consen 289 ALLTYFFGKR----GNGKLSIDEFLKFQENLQEEILE 321 (489)
T ss_pred hHHHHhhccC----CCccccHHHHHHHHHHHHHHHHH
Confidence 3333333334 7899999999999886 334443
No 49
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.08 E-value=8.2e-06 Score=60.00 Aligned_cols=62 Identities=16% Similarity=0.266 Sum_probs=53.5
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHH
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEI 65 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~ 65 (264)
+|+.+|+ +++|.|+.+|+..++... +-.++.+..+|+.+|.+++|.|+.+||..++..+...
T Consensus 15 ~F~~~D~-d~~G~Is~~el~~~l~~~--~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~~ 76 (96)
T smart00027 15 IFRSLDK-NQDGTVTGAQAKPILLKS--GLPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYRK 76 (96)
T ss_pred HHHHhCC-CCCCeEeHHHHHHHHHHc--CCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHH
Confidence 3788995 999999999999998773 4556788999999999999999999999988776554
No 50
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.06 E-value=1e-05 Score=58.66 Aligned_cols=62 Identities=19% Similarity=0.278 Sum_probs=52.2
Q ss_pred Cccccc-ccCCCc-ceeHHHHHHHHHH-----hhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHH
Q 024668 1 MFNLVT-QKRNDH-KLTFEDLVVAKAT-----YEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAML 63 (264)
Q Consensus 1 lf~~~D-~~d~~g-~I~f~eF~~~ls~-----~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~ 63 (264)
.|+.|| + +|+| .|+..|+...|.. +.....++.+..+++.+|.|++|.|+.+|+..++..+.
T Consensus 13 aF~~fD~~-dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~~ 81 (88)
T cd05027 13 VFHQYSGR-EGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMVT 81 (88)
T ss_pred HHHHhccc-CCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 378897 6 8999 5999999999988 43444567799999999999999999999998877654
No 51
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.02 E-value=7.7e-06 Score=62.31 Aligned_cols=54 Identities=19% Similarity=0.313 Sum_probs=47.3
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHH
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVV 59 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l 59 (264)
+|..+|+ |+||.|+.+|..... ....+..+...|+.+|.|+||.||.+|+..++
T Consensus 53 ~F~~lD~-d~DG~Ls~~EL~~~~----l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 53 MFNQLDG-NYDGKLSHHELAPIR----LDPNEHCIKPFFESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred HHHHHCC-CCCCcCCHHHHHHHH----ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 4789995 999999999999765 34557788899999999999999999999887
No 52
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=97.99 E-value=2.8e-05 Score=56.27 Aligned_cols=71 Identities=17% Similarity=0.270 Sum_probs=53.7
Q ss_pred HHHHHhhhhcccC--CCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHH
Q 024668 33 EIEEFIYQLLDVN--DDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFR 110 (264)
Q Consensus 33 ekl~~~F~~~D~d--~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~ 110 (264)
+.+...|.-|+.. .+|.|+.+||+.++...++.... ....++.++.+++.+|. + ++|.|+|+||.
T Consensus 8 ~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t-------~~~~~~~v~~i~~~~D~--d----~dG~I~f~eF~ 74 (88)
T cd05030 8 ETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLK-------KEKNQKAIDKIFEDLDT--N----QDGQLSFEEFL 74 (88)
T ss_pred HHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhc-------cCCCHHHHHHHHHHcCC--C----CCCcCcHHHHH
Confidence 4677788888855 47999999999999765442110 12347889999999966 4 89999999999
Q ss_pred HhhhcC
Q 024668 111 SWCTLI 116 (264)
Q Consensus 111 ~~~~~~ 116 (264)
..+...
T Consensus 75 ~~~~~~ 80 (88)
T cd05030 75 VLVIKV 80 (88)
T ss_pred HHHHHH
Confidence 988753
No 53
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=97.99 E-value=1.5e-05 Score=57.90 Aligned_cols=64 Identities=20% Similarity=0.139 Sum_probs=53.0
Q ss_pred Cccccccc-CCCcceeHHHHHHHHHH-hhCCCHH-HHHHHhhhhcccCCCCccCHHHHHHHHHHHHHH
Q 024668 1 MFNLVTQK-RNDHKLTFEDLVVAKAT-YEKGTKD-EIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEI 65 (264)
Q Consensus 1 lf~~~D~~-d~~g~I~f~eF~~~ls~-~~~g~~~-ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~ 65 (264)
.|+.|| . +++|.|+..|+...+.. +-.--.. +.++.+++..|.|+||.|+.+||..++..+...
T Consensus 13 ~F~~fd-~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~~~ 79 (89)
T cd05022 13 NFHKAS-VKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGELAKA 79 (89)
T ss_pred HHHHHh-CCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHH
Confidence 378899 6 89999999999999987 5322223 679999999999999999999999998877544
No 54
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.94 E-value=5.9e-06 Score=47.64 Aligned_cols=27 Identities=15% Similarity=0.362 Sum_probs=24.1
Q ss_pred HHHHhhhhcccCCCCccCHHHHHHHHH
Q 024668 34 IEEFIYQLLDVNDDGVLGRSDLESVVI 60 (264)
Q Consensus 34 kl~~~F~~~D~d~~G~It~~El~~~l~ 60 (264)
+++.+|+.||.|++|+|+.+||+.++.
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 478899999999999999999999987
No 55
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=97.93 E-value=2.3e-05 Score=57.37 Aligned_cols=64 Identities=20% Similarity=0.188 Sum_probs=51.2
Q ss_pred CcccccccCCCc-ceeHHHHHHHHHHhh-----CCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHH
Q 024668 1 MFNLVTQKRNDH-KLTFEDLVVAKATYE-----KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLE 64 (264)
Q Consensus 1 lf~~~D~~d~~g-~I~f~eF~~~ls~~~-----~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~ 64 (264)
+|+.||..||+| .|+..|+..++.... .....+.+..+++-+|.|++|.|+.+||..++..+..
T Consensus 15 ~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~~ 84 (93)
T cd05026 15 IFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAALTV 84 (93)
T ss_pred HHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH
Confidence 378888227998 599999999996632 1224568999999999999999999999998877654
No 56
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=97.93 E-value=8.9e-06 Score=53.03 Aligned_cols=52 Identities=17% Similarity=0.306 Sum_probs=41.7
Q ss_pred CCCccCHHHHHHHHHHHHHHHhcccccccCCC-chHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhc
Q 024668 46 DDGVLGRSDLESVVIAMLEIIFSMEISERGSN-SHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 115 (264)
Q Consensus 46 ~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~ 115 (264)
.+|.|+.+||+.++..+ + .. .+++.++.+++.+|.+ ++|.|+++||+..+..
T Consensus 1 ~~G~i~~~~~~~~l~~~-g-----------~~~~s~~e~~~l~~~~D~~------~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKL-G-----------IKDLSEEEVDRLFREFDTD------GDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHT-T-----------SSSSCHHHHHHHHHHHTTS------SSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHh-C-----------CCCCCHHHHHHHHHhcccC------CCCCCCHHHHHHHHHh
Confidence 37999999999998433 2 13 5677799999999774 8999999999998763
No 57
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.91 E-value=2.8e-05 Score=56.93 Aligned_cols=61 Identities=18% Similarity=0.179 Sum_probs=49.6
Q ss_pred Cccccccc-CC-CcceeHHHHHHHHHHhh-----CCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHH
Q 024668 1 MFNLVTQK-RN-DHKLTFEDLVVAKATYE-----KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAM 62 (264)
Q Consensus 1 lf~~~D~~-d~-~g~I~f~eF~~~ls~~~-----~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~ 62 (264)
.|+.|| . || +|.|+..|+..++.... ....++.++.+++.+|.|++|.|+.+||..++..+
T Consensus 13 ~F~~~D-~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~ 80 (94)
T cd05031 13 TFHRYA-GKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGL 80 (94)
T ss_pred HHHHHh-ccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 378898 4 76 69999999999987522 23356788999999999999999999999887654
No 58
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=97.90 E-value=1.9e-05 Score=65.13 Aligned_cols=60 Identities=17% Similarity=0.218 Sum_probs=51.6
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhhC-CCH------HHHHHHhhhhcccCCCCccCHHHHHHHHHH
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYEK-GTK------DEIEEFIYQLLDVNDDGVLGRSDLESVVIA 61 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~~-g~~------~ekl~~~F~~~D~d~~G~It~~El~~~l~~ 61 (264)
.|+++|. +++|.|+.+|+..++..+.. +.. ++.+..+|.-+|.|+||.|+.+|+.+++..
T Consensus 109 aF~vYD~-~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~ 175 (187)
T KOG0034|consen 109 AFRVYDL-DGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEK 175 (187)
T ss_pred HHHHhcC-CCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 3789995 99999999999999998874 222 367888899999999999999999998764
No 59
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=97.88 E-value=3.9e-05 Score=55.91 Aligned_cols=63 Identities=22% Similarity=0.275 Sum_probs=51.5
Q ss_pred Cccccc-ccCCCc-ceeHHHHHHHHHH-hh----CCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHH
Q 024668 1 MFNLVT-QKRNDH-KLTFEDLVVAKAT-YE----KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLE 64 (264)
Q Consensus 1 lf~~~D-~~d~~g-~I~f~eF~~~ls~-~~----~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~ 64 (264)
.|+.|| + +++| .|+..|+..++.. +. ....++.++.+|+.+|.|++|.|+.+|+..++..+..
T Consensus 14 ~F~~fDd~-dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~~~ 83 (92)
T cd05025 14 VFHAHSGK-EGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALTV 83 (92)
T ss_pred HHHHHhcc-cCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHH
Confidence 378896 7 9999 5999999999975 31 1234678999999999999999999999998876544
No 60
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.86 E-value=7.2e-06 Score=46.54 Aligned_cols=25 Identities=20% Similarity=0.323 Sum_probs=22.1
Q ss_pred CcccccccCCCcceeHHHHHHHHHHh
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATY 26 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~ 26 (264)
+|+.+|+ |+||.|+++||+.++..+
T Consensus 5 ~F~~~D~-d~dG~I~~~Ef~~~~~~L 29 (29)
T PF00036_consen 5 AFREFDK-DGDGKIDFEEFKEMMKKL 29 (29)
T ss_dssp HHHHHST-TSSSEEEHHHHHHHHHHT
T ss_pred HHHHHCC-CCCCcCCHHHHHHHHHhC
Confidence 5889996 999999999999998753
No 61
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=97.82 E-value=7.4e-05 Score=67.42 Aligned_cols=105 Identities=12% Similarity=0.229 Sum_probs=85.1
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhhCC-CHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCch
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYEKG-TKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSH 79 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~~g-~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~ 79 (264)
||+.+| .+++|.||..+...++..+-.. ...+-.+.+|..+|.|.||.++.+||++.+.. .
T Consensus 19 lf~~lD-~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~-----------------~ 80 (463)
T KOG0036|consen 19 LFKELD-SKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDN-----------------K 80 (463)
T ss_pred HHHHhc-cCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHH-----------------h
Confidence 588999 5999999999999999888744 56788999999999999999999999998753 2
Q ss_pred HHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhc------CchhhhhhhcccCC
Q 024668 80 QDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL------IPSARKFLGGLLTP 129 (264)
Q Consensus 80 ~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~------~p~~~~~l~~ll~~ 129 (264)
+...-.+|.++|. + +||.|..+|..+.+.. +....+++.++.+.
T Consensus 81 E~~l~~~F~~iD~--~----hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~ 130 (463)
T KOG0036|consen 81 ELELYRIFQSIDL--E----HDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKD 130 (463)
T ss_pred HHHHHHHHhhhcc--c----cCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccC
Confidence 4456677888855 4 8999999998888775 33566777777664
No 62
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=97.80 E-value=4.4e-05 Score=55.01 Aligned_cols=63 Identities=19% Similarity=0.193 Sum_probs=51.4
Q ss_pred Cccccccc--CCCcceeHHHHHHHHHHhh-C----CCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHH
Q 024668 1 MFNLVTQK--RNDHKLTFEDLVVAKATYE-K----GTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLE 64 (264)
Q Consensus 1 lf~~~D~~--d~~g~I~f~eF~~~ls~~~-~----g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~ 64 (264)
+|..+| . +++|.|+..|+..++.... . ...++.+..+++.+|.+++|.|+.+||..++..+..
T Consensus 13 ~F~~~D-~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~~~ 82 (88)
T cd00213 13 VFHKYS-GKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKLAV 82 (88)
T ss_pred HHHHHh-hccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHH
Confidence 378899 6 7999999999999987532 1 123678999999999999999999999998876643
No 63
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=97.76 E-value=6.5e-05 Score=54.39 Aligned_cols=64 Identities=14% Similarity=0.113 Sum_probs=50.7
Q ss_pred CcccccccCC-CcceeHHHHHHHHHHh---hCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHH
Q 024668 1 MFNLVTQKRN-DHKLTFEDLVVAKATY---EKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLE 64 (264)
Q Consensus 1 lf~~~D~~d~-~g~I~f~eF~~~ls~~---~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~ 64 (264)
+|+.+|..+| +|.|+.+||..++... .....++.+..+++.+|.|++|.|+.+||..++..+..
T Consensus 15 ~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l~~ 82 (88)
T cd05029 15 IFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGALAL 82 (88)
T ss_pred HHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHH
Confidence 4778884256 8899999999999742 22234678888999999999999999999988876653
No 64
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=97.71 E-value=0.00024 Score=59.03 Aligned_cols=102 Identities=12% Similarity=0.127 Sum_probs=79.6
Q ss_pred cccccccCCCcceeHHHHHHHHHHhh-CCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchH
Q 024668 2 FNLVTQKRNDHKLTFEDLVVAKATYE-KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQ 80 (264)
Q Consensus 2 f~~~D~~d~~g~I~f~eF~~~ls~~~-~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~ 80 (264)
|+..|+ |.+|.|+-+|...+++... .+=.-+.++.+-.|||.|.+|.|..+|++++-+.+-
T Consensus 63 f~~vD~-d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~----------------- 124 (221)
T KOG0037|consen 63 FQSVDR-DRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYIN----------------- 124 (221)
T ss_pred HHhhCc-cccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHH-----------------
Confidence 678996 9999999999999998644 344468899999999999999999999977654332
Q ss_pred HHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhc-----CchhhhhhhcccC
Q 024668 81 DIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL-----IPSARKFLGGLLT 128 (264)
Q Consensus 81 ~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~-----~p~~~~~l~~ll~ 128 (264)
.-..+|+..|.| +.|.|+..|+.+.+.. .|.+...|-.-+-
T Consensus 125 -~Wr~vF~~~D~D------~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd 170 (221)
T KOG0037|consen 125 -QWRNVFRTYDRD------RSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYD 170 (221)
T ss_pred -HHHHHHHhcccC------CCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhc
Confidence 234678888664 8899999999999886 5666655443333
No 65
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=97.70 E-value=0.00015 Score=66.37 Aligned_cols=108 Identities=16% Similarity=0.253 Sum_probs=79.9
Q ss_pred CCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHH
Q 024668 9 RNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLN 88 (264)
Q Consensus 9 d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~ 88 (264)
..+|.++|++|+-.+-++..-....-++..|+++|.+++|.|+..|++-+.+....-+... ...+...++...+++.
T Consensus 327 ~~eGrmdykdFv~FilA~e~k~t~~SleYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~---~~e~l~fed~l~qi~D 403 (493)
T KOG2562|consen 327 KVEGRMDYKDFVDFILAEEDKDTPASLEYWFRCLDLDGDGILTLNELRYFYEEQLQRMECM---GQEALPFEDALCQIRD 403 (493)
T ss_pred eecCcccHHHHHHHHHHhccCCCccchhhheeeeeccCCCcccHHHHHHHHHHHHHHHHhc---CCCcccHHHHHHHHHH
Confidence 4688999999999988776545567899999999999999999999998887766532211 1112345777888888
Q ss_pred hcccccCCcCCCCCCCCHHHHHHhhhcCchhhhhhhcc
Q 024668 89 AATFSKNGERSSNKSMSFEDFRSWCTLIPSARKFLGGL 126 (264)
Q Consensus 89 ~~d~d~~~~~~~dg~is~eeF~~~~~~~p~~~~~l~~l 126 (264)
.+... ..++||+.+|.. .+..-.+..+|..+
T Consensus 404 MvkP~------~~~kItLqDlk~-skl~~~v~n~l~nl 434 (493)
T KOG2562|consen 404 MVKPE------DENKITLQDLKG-SKLAGTVFNILFNL 434 (493)
T ss_pred HhCcc------CCCceeHHHHhh-ccccchhhhhhccH
Confidence 87542 579999999998 55555666555444
No 66
>PF14658 EF-hand_9: EF-hand domain
Probab=97.70 E-value=7e-05 Score=50.75 Aligned_cols=63 Identities=16% Similarity=0.211 Sum_probs=51.3
Q ss_pred HhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhc
Q 024668 37 FIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 115 (264)
Q Consensus 37 ~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~ 115 (264)
-+|++||.++.|.|...++..+|+++..- ...+..++.+.+++|.+ + ++|.|+++.|...|+.
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~-----------~p~e~~Lq~l~~elDP~-g----~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGR-----------SPEESELQDLINELDPE-G----RDGSVNFDTFLAIMRD 64 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCC-----------CCcHHHHHHHHHHhCCC-C----CCceEeHHHHHHHHHH
Confidence 37999999999999999999999987541 23466888999999764 2 4699999999988763
No 67
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=97.64 E-value=0.00014 Score=52.78 Aligned_cols=62 Identities=16% Similarity=0.229 Sum_probs=49.7
Q ss_pred ccc-ccccCCCc-ceeHHHHHHHHHHhh-----CCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHH
Q 024668 2 FNL-VTQKRNDH-KLTFEDLVVAKATYE-----KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLE 64 (264)
Q Consensus 2 f~~-~D~~d~~g-~I~f~eF~~~ls~~~-----~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~ 64 (264)
|+. +|+ +|+| .|+.+||...+.... .......+..+++.+|.|+||.|+.+|+.+++..+..
T Consensus 15 F~~y~~~-dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l~~ 83 (89)
T cd05023 15 FQKYAGK-DGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLAV 83 (89)
T ss_pred HHHHhcc-CCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHHH
Confidence 556 674 7876 999999999998753 2333567888999999999999999999998876643
No 68
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.64 E-value=4.4e-05 Score=41.73 Aligned_cols=25 Identities=20% Similarity=0.395 Sum_probs=20.4
Q ss_pred HHHhhhhcccCCCCccCHHHHHHHH
Q 024668 35 EEFIYQLLDVNDDGVLGRSDLESVV 59 (264)
Q Consensus 35 l~~~F~~~D~d~~G~It~~El~~~l 59 (264)
++.+|+.+|.|+||.|+.+|+++++
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 4568888999999999999988754
No 69
>PF14658 EF-hand_9: EF-hand domain
Probab=97.59 E-value=0.00026 Score=48.02 Aligned_cols=60 Identities=10% Similarity=0.168 Sum_probs=54.4
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhhC-CCHHHHHHHhhhhcccCCC-CccCHHHHHHHHHH
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYEK-GTKDEIEEFIYQLLDVNDD-GVLGRSDLESVVIA 61 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~~-g~~~ekl~~~F~~~D~d~~-G~It~~El~~~l~~ 61 (264)
.|++|| +++.|.|.-.+.+..|..+.. +..++.++.+.+.+|.+|. |.|..+++..+|+.
T Consensus 3 ~F~~fD-~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 3 AFDAFD-TQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred chhhcC-CcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 589999 599999999999999999874 8888999999999999998 99999999888763
No 70
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=97.55 E-value=0.00016 Score=59.37 Aligned_cols=66 Identities=12% Similarity=0.170 Sum_probs=54.5
Q ss_pred HHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHh
Q 024668 33 EIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSW 112 (264)
Q Consensus 33 ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~ 112 (264)
.-..-+|+.||.+.||+|+..||+.||+.+.. +.+.--...|+++.|- + .||+|||-||.-+
T Consensus 99 k~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLga------------pQTHL~lK~mikeVde--d----~dgklSfreflLI 160 (244)
T KOG0041|consen 99 KDAESMFKQYDEDRDGFIDLMELKRMMEKLGA------------PQTHLGLKNMIKEVDE--D----FDGKLSFREFLLI 160 (244)
T ss_pred HHHHHHHHHhcccccccccHHHHHHHHHHhCC------------chhhHHHHHHHHHhhc--c----cccchhHHHHHHH
Confidence 35667899999999999999999999987653 5666677888899855 4 8999999999887
Q ss_pred hhcC
Q 024668 113 CTLI 116 (264)
Q Consensus 113 ~~~~ 116 (264)
+.+.
T Consensus 161 frka 164 (244)
T KOG0041|consen 161 FRKA 164 (244)
T ss_pred HHHH
Confidence 7763
No 71
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.51 E-value=0.00072 Score=48.98 Aligned_cols=68 Identities=13% Similarity=0.164 Sum_probs=52.8
Q ss_pred HHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhh
Q 024668 34 IEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWC 113 (264)
Q Consensus 34 kl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~ 113 (264)
.+...|.-|.. +++.+++.||+++|+.=++.+.+. ..-...++.+++.+|. + +||.|+|+||...+
T Consensus 9 ~lI~~FhkYaG-~~~tLsk~Elk~Ll~~Elp~~l~~-------~~d~~~vd~im~~LD~--n----~Dg~vdF~EF~~Lv 74 (91)
T cd05024 9 KMMLTFHKFAG-EKNYLNRDDLQKLMEKEFSEFLKN-------QNDPMAVDKIMKDLDD--C----RDGKVGFQSFFSLI 74 (91)
T ss_pred HHHHHHHHHcC-CCCcCCHHHHHHHHHHHhHHHHcC-------CCCHHHHHHHHHHhCC--C----CCCcCcHHHHHHHH
Confidence 45667888873 467999999999998877654431 2235688999999965 4 89999999999988
Q ss_pred hc
Q 024668 114 TL 115 (264)
Q Consensus 114 ~~ 115 (264)
..
T Consensus 75 ~~ 76 (91)
T cd05024 75 AG 76 (91)
T ss_pred HH
Confidence 76
No 72
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=97.44 E-value=0.00072 Score=61.64 Aligned_cols=69 Identities=12% Similarity=0.248 Sum_probs=54.3
Q ss_pred HHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHh
Q 024668 33 EIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSW 112 (264)
Q Consensus 33 ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~ 112 (264)
..++.+|+.+|.|++|.|+.+||+.+.+.+...+ . -...+..+.++.+.+|. + +||.|+++||.+.
T Consensus 547 s~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~-~-------~~i~~~~i~~la~~mD~--N----kDG~IDlNEfLeA 612 (631)
T KOG0377|consen 547 SSLETIFNIIDADNSGEISLDEFRTAWKLLSSHM-N-------GAISDDEILELARSMDL--N----KDGKIDLNEFLEA 612 (631)
T ss_pred hhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhc-C-------CCcCHHHHHHHHHhhcc--C----CCCcccHHHHHHH
Confidence 3567889999999999999999999877655431 1 13556777788888866 4 8999999999988
Q ss_pred hhc
Q 024668 113 CTL 115 (264)
Q Consensus 113 ~~~ 115 (264)
+..
T Consensus 613 Frl 615 (631)
T KOG0377|consen 613 FRL 615 (631)
T ss_pred Hhh
Confidence 774
No 73
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.18 E-value=0.00073 Score=62.05 Aligned_cols=54 Identities=20% Similarity=0.355 Sum_probs=45.3
Q ss_pred HHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHH
Q 024668 31 KDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFR 110 (264)
Q Consensus 31 ~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~ 110 (264)
.+..++.+|+++|.|+||.|+.+|+.. ++.+|..+|. + +||.|+++||.
T Consensus 332 ~~~~l~~aF~~~D~dgdG~Is~~E~~~-------------------------~~~~F~~~D~--d----~DG~Is~eEf~ 380 (391)
T PRK12309 332 FTHAAQEIFRLYDLDGDGFITREEWLG-------------------------SDAVFDALDL--N----HDGKITPEEMR 380 (391)
T ss_pred hhHHHHHHHHHhCCCCCCcCcHHHHHH-------------------------HHHHHHHhCC--C----CCCCCcHHHHH
Confidence 467889999999999999999999831 3467888866 4 89999999999
Q ss_pred Hhhhc
Q 024668 111 SWCTL 115 (264)
Q Consensus 111 ~~~~~ 115 (264)
..+..
T Consensus 381 ~~~~~ 385 (391)
T PRK12309 381 AGLGA 385 (391)
T ss_pred HHHHH
Confidence 88764
No 74
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=97.18 E-value=0.00086 Score=48.46 Aligned_cols=62 Identities=19% Similarity=0.215 Sum_probs=49.1
Q ss_pred cccccccC--CCcceeHHHHHHHHHHhh-C----CCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHH
Q 024668 2 FNLVTQKR--NDHKLTFEDLVVAKATYE-K----GTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLE 64 (264)
Q Consensus 2 f~~~D~~d--~~g~I~f~eF~~~ls~~~-~----g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~ 64 (264)
|+.++. + .+|.|+..|+...+.... . ...++.+..+|+.+|.|++|.|+.+||..++..+..
T Consensus 14 f~~y~~-~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~~~ 82 (88)
T cd05030 14 FHQYSV-RKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKVGV 82 (88)
T ss_pred HHHHhc-cCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHHH
Confidence 566663 3 478999999999997432 2 122688999999999999999999999998877654
No 75
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=97.16 E-value=0.0026 Score=58.00 Aligned_cols=67 Identities=9% Similarity=0.180 Sum_probs=47.9
Q ss_pred cccccccCCCcceeHHHHHHHHHHhhC-CCH----------------HHHHHHhhhhcccCCCCccCHHHHHHHHHHHHH
Q 024668 2 FNLVTQKRNDHKLTFEDLVVAKATYEK-GTK----------------DEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLE 64 (264)
Q Consensus 2 f~~~D~~d~~g~I~f~eF~~~ls~~~~-g~~----------------~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~ 64 (264)
|..|| +||||.||-+||....+.... ... +-.--..-..|.++++|.++.+||.++++.+-.
T Consensus 239 FKMFD-~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F~e~Lq~ 317 (489)
T KOG2643|consen 239 FKMFD-LDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKRGNGKLSIDEFLKFQENLQE 317 (489)
T ss_pred eeeee-cCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccCCCccccHHHHHHHHHHHHH
Confidence 78899 599999999999998876552 111 001112334568899999999999999988765
Q ss_pred HHhcc
Q 024668 65 IIFSM 69 (264)
Q Consensus 65 ~~~~~ 69 (264)
.+.++
T Consensus 318 Eil~l 322 (489)
T KOG2643|consen 318 EILEL 322 (489)
T ss_pred HHHHH
Confidence 54433
No 76
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=97.13 E-value=0.0029 Score=45.80 Aligned_cols=83 Identities=14% Similarity=0.293 Sum_probs=53.7
Q ss_pred HHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcc-cccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHH
Q 024668 32 DEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSM-EISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFR 110 (264)
Q Consensus 32 ~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~-~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~ 110 (264)
++|.+.+|..+. |.+|.++++.|..+|..++..-... +...-+ .++..++.-|.... .+..|+.++|.
T Consensus 2 ~dKyRylFslis-d~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg--~~e~sv~sCF~~~~--------~~~~I~~~~Fl 70 (90)
T PF09069_consen 2 EDKYRYLFSLIS-DSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFG--YIEPSVRSCFQQVQ--------LSPKITENQFL 70 (90)
T ss_dssp HHHHHHHHHHHS--TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT----HHHHHHHHHHTT--------T-S-B-HHHHH
T ss_pred hHHHHHHHHHHc-CCCCCCcHHHHHHHHHHHHHHHHHhCcccccc--CcHHHHHHHhcccC--------CCCccCHHHHH
Confidence 589999999994 7899999999999998876542111 111222 36777777777762 45779999999
Q ss_pred HhhhcCchhhhhhhc
Q 024668 111 SWCTLIPSARKFLGG 125 (264)
Q Consensus 111 ~~~~~~p~~~~~l~~ 125 (264)
+|+...|...-+|..
T Consensus 71 ~wl~~ePq~lVWLP~ 85 (90)
T PF09069_consen 71 DWLMSEPQSLVWLPT 85 (90)
T ss_dssp HHHHT--TTTTHHHH
T ss_pred HHHHhCCCeeeHHHH
Confidence 999999987766643
No 77
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=97.07 E-value=0.0043 Score=48.98 Aligned_cols=61 Identities=18% Similarity=0.327 Sum_probs=44.0
Q ss_pred HHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHH
Q 024668 32 DEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRS 111 (264)
Q Consensus 32 ~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~ 111 (264)
-+..+.||.++|.|+||.|.+++|+.++.++.. ...++.++.|++++ .|.|+|..|.-
T Consensus 31 IqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk------------~~~d~elDaM~~Ea----------~gPINft~FLT 88 (171)
T KOG0031|consen 31 IQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGK------------IASDEELDAMMKEA----------PGPINFTVFLT 88 (171)
T ss_pred HHHHHHHHHHHhccCCCcccHHHHHHHHHHcCC------------CCCHHHHHHHHHhC----------CCCeeHHHHHH
Confidence 367889999999999999999999998877643 24456666666664 35666666654
Q ss_pred hhh
Q 024668 112 WCT 114 (264)
Q Consensus 112 ~~~ 114 (264)
++.
T Consensus 89 mfG 91 (171)
T KOG0031|consen 89 MFG 91 (171)
T ss_pred HHH
Confidence 443
No 78
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.86 E-value=0.0059 Score=45.81 Aligned_cols=79 Identities=10% Similarity=0.184 Sum_probs=50.7
Q ss_pred CHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHH
Q 024668 30 TKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDF 109 (264)
Q Consensus 30 ~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF 109 (264)
++++..--.|+|.|.|+||.|..-|+.+.+...-.. ...+.+..+..++...+.++...-. +++.++||.|.|-||
T Consensus 64 tpeqlqfHYF~MHDldknn~lDGiEl~kAiTH~H~~--h~~ghep~Pl~sE~Ele~~iD~vL~--DdDfN~DG~IDYgEf 139 (144)
T KOG4065|consen 64 TPEQLQFHYFSMHDLDKNNFLDGIELLKAITHTHDA--HDSGHEPVPLSSEAELERLIDAVLD--DDDFNGDGVIDYGEF 139 (144)
T ss_pred CHHHHhhhhhhhhccCcCCcchHHHHHHHHHHHhhh--hhcCCCCCCCCCHHHHHHHHHHHhc--ccccCCCceeeHHHH
Confidence 455555568999999999999999999998876552 1122222222334444444444322 123349999999999
Q ss_pred HHh
Q 024668 110 RSW 112 (264)
Q Consensus 110 ~~~ 112 (264)
.+.
T Consensus 140 lK~ 142 (144)
T KOG4065|consen 140 LKR 142 (144)
T ss_pred Hhh
Confidence 764
No 79
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=96.73 E-value=0.0061 Score=53.66 Aligned_cols=89 Identities=10% Similarity=0.073 Sum_probs=67.4
Q ss_pred CCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHH
Q 024668 9 RNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLN 88 (264)
Q Consensus 9 d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~ 88 (264)
++...+--.++......+......+++..++..+|.+++|.|+..|++..+.....- -+.+.+..-+.
T Consensus 53 dhe~~~~d~e~~~~fd~l~~ee~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~------------~v~~~~~~~~~ 120 (325)
T KOG4223|consen 53 DHEAFLGDDEFADEFDQLTPEESQERLGKLVPKIDSDSDGFVTESELKAWIMQSQKK------------YVVEEAARRWD 120 (325)
T ss_pred cccccccchhhhhhhhhhCcchhHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHH------------HHHHHHHHHHH
Confidence 344455557777777777777788999999999999999999999999988765542 22334444466
Q ss_pred hcccccCCcCCCCCCCCHHHHHHhhhc
Q 024668 89 AATFSKNGERSSNKSMSFEDFRSWCTL 115 (264)
Q Consensus 89 ~~d~d~~~~~~~dg~is~eeF~~~~~~ 115 (264)
..+. + +||.|+++||..+...
T Consensus 121 ~~d~--~----~Dg~i~~eey~~~~~~ 141 (325)
T KOG4223|consen 121 EYDK--N----KDGFITWEEYLPQTYG 141 (325)
T ss_pred Hhcc--C----ccceeeHHHhhhhhhh
Confidence 6644 4 8999999999888874
No 80
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=96.71 E-value=0.0096 Score=46.25 Aligned_cols=16 Identities=19% Similarity=0.144 Sum_probs=9.0
Q ss_pred CCCCCCHHHHHHhhhc
Q 024668 100 SNKSMSFEDFRSWCTL 115 (264)
Q Consensus 100 ~dg~is~eeF~~~~~~ 115 (264)
++|.|...|++..+.+
T Consensus 101 g~G~i~~aeLRhvLtt 116 (152)
T KOG0030|consen 101 GNGTIMGAELRHVLTT 116 (152)
T ss_pred CCcceeHHHHHHHHHH
Confidence 5566666665555443
No 81
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=96.57 E-value=0.0038 Score=57.07 Aligned_cols=61 Identities=16% Similarity=0.332 Sum_probs=50.3
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhh---CCC-HHHHHHHhhhhcccCCCCccCHHHHHHHHHHH
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYE---KGT-KDEIEEFIYQLLDVNDDGVLGRSDLESVVIAM 62 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~---~g~-~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~ 62 (264)
||+.+|+ |++|.|+.+||..+...+. .+. .+..+..+-+++|.|+||.|...||.++..-+
T Consensus 552 iF~~iD~-D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlv 616 (631)
T KOG0377|consen 552 IFNIIDA-DNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLV 616 (631)
T ss_pred HHHHhcc-CCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhh
Confidence 5899995 9999999999999876665 222 35677888899999999999999998876543
No 82
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=96.56 E-value=0.0016 Score=35.45 Aligned_cols=22 Identities=23% Similarity=0.385 Sum_probs=18.8
Q ss_pred CcccccccCCCcceeHHHHHHHH
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAK 23 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~l 23 (264)
.|+.+|. |+||.|+++||...+
T Consensus 4 ~F~~~D~-d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 4 AFQQFDT-DGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHTT-TSSSEEEHHHHHHHH
T ss_pred HHHHHcC-CCCCcCCHHHHHHHC
Confidence 3788995 999999999998753
No 83
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=96.42 E-value=0.0018 Score=37.07 Aligned_cols=23 Identities=22% Similarity=0.382 Sum_probs=20.0
Q ss_pred CcccccccCCCcceeHHHHHHHHH
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKA 24 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls 24 (264)
+|+.+|+ |++|.|+++||..++.
T Consensus 5 ~F~~~D~-d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 5 AFKMFDK-DGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHH-T-TSSSEEEHHHHHHHHH
T ss_pred HHHHHCC-CCCCcCcHHHHHHHHH
Confidence 4889995 9999999999999987
No 84
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=96.23 E-value=0.0029 Score=60.34 Aligned_cols=53 Identities=30% Similarity=0.458 Sum_probs=50.0
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHH
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDL 55 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El 55 (264)
+|+..|. +++|.|+|.+++.+++.++.+..-+|+.++|+++|.+++ ...++|+
T Consensus 560 lF~l~D~-s~~g~Ltf~~lv~gL~~l~~~~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 560 LFRLLDD-SMTGLLTFKDLVSGLSILKAGDALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHhccc-CCcceeEHHHHHHHHHHHHhhhHHHHHHHHHhhccCCcc-ccccccc
Confidence 5788995 999999999999999999999999999999999999999 8898888
No 85
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=96.09 E-value=0.0062 Score=32.73 Aligned_cols=27 Identities=19% Similarity=0.389 Sum_probs=22.2
Q ss_pred HHHhhhhcccCCCCccCHHHHHHHHHH
Q 024668 35 EEFIYQLLDVNDDGVLGRSDLESVVIA 61 (264)
Q Consensus 35 l~~~F~~~D~d~~G~It~~El~~~l~~ 61 (264)
++.+|+.+|.+++|.|+.+||..++..
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 466888999999999999998887754
No 86
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=95.84 E-value=0.0017 Score=49.21 Aligned_cols=61 Identities=20% Similarity=0.419 Sum_probs=41.8
Q ss_pred HHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHH
Q 024668 31 KDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFR 110 (264)
Q Consensus 31 ~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~ 110 (264)
...-+.+-|.-+|.|+||.|+++|+..+...+. ..+.-+..+++..|.+ +||.||..||.
T Consensus 52 ~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l~--------------~~e~C~~~F~~~CD~n------~d~~Is~~EW~ 111 (113)
T PF10591_consen 52 CKRVVHWKFCQLDRNKDGVLDRSELKPLRRPLM--------------PPEHCARPFFRSCDVN------KDGKISLDEWC 111 (113)
T ss_dssp GHHHHHHHHHHH--T-SSEE-TTTTGGGGSTTS--------------TTGGGHHHHHHHH-TT-------SSSEEHHHHH
T ss_pred hhhhhhhhHhhhcCCCCCccCHHHHHHHHHHHh--------------hhHHHHHHHHHHcCCC------CCCCCCHHHHc
Confidence 356788899999999999999999977543221 1234577889999764 89999999986
Q ss_pred H
Q 024668 111 S 111 (264)
Q Consensus 111 ~ 111 (264)
.
T Consensus 112 ~ 112 (113)
T PF10591_consen 112 N 112 (113)
T ss_dssp H
T ss_pred c
Confidence 4
No 87
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=95.73 E-value=0.015 Score=54.10 Aligned_cols=56 Identities=16% Similarity=0.294 Sum_probs=47.6
Q ss_pred cccccCCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHH
Q 024668 4 LVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAM 62 (264)
Q Consensus 4 ~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~ 62 (264)
.-| +-+||-|+|+||+..-+.+|. ++.+-+.+|.+||+.++|.+|.+++..++...
T Consensus 82 iaD-~tKDglisf~eF~afe~~lC~--pDal~~~aFqlFDr~~~~~vs~~~~~~if~~t 137 (694)
T KOG0751|consen 82 IAD-QTKDGLISFQEFRAFESVLCA--PDALFEVAFQLFDRLGNGEVSFEDVADIFGQT 137 (694)
T ss_pred hhh-hcccccccHHHHHHHHhhccC--chHHHHHHHHHhcccCCCceehHHHHHHHhcc
Confidence 356 478999999999999888775 36688899999999999999999999887543
No 88
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=95.66 E-value=0.045 Score=35.07 Aligned_cols=49 Identities=16% Similarity=0.264 Sum_probs=36.7
Q ss_pred eeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHH
Q 024668 14 LTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAM 62 (264)
Q Consensus 14 I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~ 62 (264)
++|.|--..+..+--.-.++-+..+|+..|.+++|.+..+|+.++++.+
T Consensus 2 msf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~L 50 (51)
T PF14788_consen 2 MSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKRL 50 (51)
T ss_dssp BEHHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHHh
Confidence 5777777776665444457788899999999999999999999988754
No 89
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=95.48 E-value=0.044 Score=40.87 Aligned_cols=67 Identities=21% Similarity=0.342 Sum_probs=51.9
Q ss_pred CHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHH
Q 024668 30 TKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDF 109 (264)
Q Consensus 30 ~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF 109 (264)
...++...+|+..|. ++|.|+.++.+.++... ....+....+..-+|.+ +||.++++||
T Consensus 7 ~e~~~y~~~F~~l~~-~~g~isg~~a~~~f~~S--------------~L~~~~L~~IW~LaD~~------~dG~L~~~EF 65 (104)
T PF12763_consen 7 EEKQKYDQIFQSLDP-QDGKISGDQAREFFMKS--------------GLPRDVLAQIWNLADID------NDGKLDFEEF 65 (104)
T ss_dssp CHHHHHHHHHHCTSS-STTEEEHHHHHHHHHHT--------------TSSHHHHHHHHHHH-SS------SSSEEEHHHH
T ss_pred HHHHHHHHHHHhcCC-CCCeEeHHHHHHHHHHc--------------CCCHHHHHHHHhhhcCC------CCCcCCHHHH
Confidence 345788899999985 78999999998876531 24457788888888764 7999999999
Q ss_pred HHhhhcCc
Q 024668 110 RSWCTLIP 117 (264)
Q Consensus 110 ~~~~~~~p 117 (264)
.-.+...-
T Consensus 66 ~iAm~Li~ 73 (104)
T PF12763_consen 66 AIAMHLIN 73 (104)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98887543
No 90
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=95.46 E-value=0.0036 Score=47.44 Aligned_cols=54 Identities=17% Similarity=0.220 Sum_probs=38.1
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHH
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLES 57 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~ 57 (264)
+|..+|. |+||.|+-.|.......+ ...+.-++-.|+..|.|+||.||..|+..
T Consensus 59 ~F~~LD~-n~d~~L~~~El~~l~~~l--~~~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 59 KFCQLDR-NKDGVLDRSELKPLRRPL--MPPEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp HHHHH---T-SSEE-TTTTGGGGSTT--STTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hHhhhcC-CCCCccCHHHHHHHHHHH--hhhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 3778995 999999999988766544 23344567789999999999999999864
No 91
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=95.45 E-value=0.064 Score=44.33 Aligned_cols=63 Identities=13% Similarity=0.065 Sum_probs=52.5
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHH
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLE 64 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~ 64 (264)
||+.+| ++.||.||+.|.-.+|..+.-....=-++..-+-.|.|.+|.|+..|+.-+......
T Consensus 104 ~Fk~yD-e~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrkaaa 166 (244)
T KOG0041|consen 104 MFKQYD-EDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKAAA 166 (244)
T ss_pred HHHHhc-ccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHHHhc
Confidence 588999 599999999999999998865555556777788889999999999999887766543
No 92
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=95.44 E-value=0.021 Score=36.56 Aligned_cols=47 Identities=9% Similarity=0.181 Sum_probs=35.1
Q ss_pred cCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhh
Q 024668 50 LGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCT 114 (264)
Q Consensus 50 It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~ 114 (264)
++.+|++.+|+.+-- .+.++.|..+|+++|.+ ++|.+.-+||..++.
T Consensus 2 msf~Evk~lLk~~NI------------~~~~~yA~~LFq~~D~s------~~g~Le~~Ef~~Fy~ 48 (51)
T PF14788_consen 2 MSFKEVKKLLKMMNI------------EMDDEYARQLFQECDKS------QSGRLEGEEFEEFYK 48 (51)
T ss_dssp BEHHHHHHHHHHTT----------------HHHHHHHHHHH-SS------SSSEBEHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcc------------CcCHHHHHHHHHHhccc------CCCCccHHHHHHHHH
Confidence 577889888875421 35688999999999764 789999999998875
No 93
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=95.32 E-value=0.039 Score=41.14 Aligned_cols=58 Identities=17% Similarity=0.293 Sum_probs=45.5
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHH
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAM 62 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~ 62 (264)
+|+..| .++|.|+-++-...+.. .+-..+.+..++.+.|.|++|+++.+||.-+|.-+
T Consensus 15 ~F~~l~--~~~g~isg~~a~~~f~~--S~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li 72 (104)
T PF12763_consen 15 IFQSLD--PQDGKISGDQAREFFMK--SGLPRDVLAQIWNLADIDNDGKLDFEEFAIAMHLI 72 (104)
T ss_dssp HHHCTS--SSTTEEEHHHHHHHHHH--TTSSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHHH
T ss_pred HHHhcC--CCCCeEeHHHHHHHHHH--cCCCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHHH
Confidence 366677 36899999988765543 45567999999999999999999999998766544
No 94
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=95.29 E-value=0.043 Score=46.70 Aligned_cols=32 Identities=16% Similarity=0.120 Sum_probs=23.7
Q ss_pred chHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhc
Q 024668 78 SHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 115 (264)
Q Consensus 78 ~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~ 115 (264)
....++..+...+|. + +|.++|..||++..-.
T Consensus 233 mLrfmVkeivrdlDq--d----gDkqlSvpeFislpvG 264 (362)
T KOG4251|consen 233 MLRFMVKEIVRDLDQ--D----GDKQLSVPEFISLPVG 264 (362)
T ss_pred hHHHHHHHHHHHhcc--C----CCeeecchhhhcCCCc
Confidence 456677777777865 3 8899999999876543
No 95
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=95.28 E-value=0.031 Score=47.53 Aligned_cols=68 Identities=12% Similarity=0.220 Sum_probs=48.4
Q ss_pred HHHHHHhhhhcccCCCCccCHHHHHHHHHHHH-HHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHH
Q 024668 32 DEIEEFIYQLLDVNDDGVLGRSDLESVVIAML-EIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFR 110 (264)
Q Consensus 32 ~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~-~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~ 110 (264)
.+++..+|.-.|.|.||.||..|+++.+..-. ..+ +...+.-+..|...|. + +||.|+.+||.
T Consensus 100 rrklmviFsKvDVNtDrkisAkEmqrwImektaEHf----------qeameeSkthFraVDp--d----gDGhvsWdEyk 163 (362)
T KOG4251|consen 100 RRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHF----------QEAMEESKTHFRAVDP--D----GDGHVSWDEYK 163 (362)
T ss_pred HHHHHHHHhhcccCccccccHHHHHHHHHHHHHHHH----------HHHHhhhhhheeeeCC--C----CCCceehhhhh
Confidence 47899999999999999999999998765432 211 1112233455777755 4 89999999996
Q ss_pred Hhhhc
Q 024668 111 SWCTL 115 (264)
Q Consensus 111 ~~~~~ 115 (264)
--+..
T Consensus 164 vkFla 168 (362)
T KOG4251|consen 164 VKFLA 168 (362)
T ss_pred hHHHh
Confidence 55443
No 96
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=95.04 E-value=0.074 Score=38.57 Aligned_cols=55 Identities=22% Similarity=0.223 Sum_probs=43.9
Q ss_pred CCcceeHHHHHHHHHH----hhC-CCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHH
Q 024668 10 NDHKLTFEDLVVAKAT----YEK-GTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLE 64 (264)
Q Consensus 10 ~~g~I~f~eF~~~ls~----~~~-g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~ 64 (264)
..+.++-.||...+.. +.+ ....+-+..+++.+|.|+||.|+.+|+..++..+.-
T Consensus 20 ~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l~~ 79 (91)
T cd05024 20 EKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGLLI 79 (91)
T ss_pred CCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence 4568999999999843 333 334578999999999999999999999988876543
No 97
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=94.71 E-value=0.083 Score=41.47 Aligned_cols=59 Identities=24% Similarity=0.380 Sum_probs=45.7
Q ss_pred cccccccCCCcceeHHHHHHHHHHhhCCCH-HHHHHHh----hhhcccCCCCccCHHHHHHHHHH
Q 024668 2 FNLVTQKRNDHKLTFEDLVVAKATYEKGTK-DEIEEFI----YQLLDVNDDGVLGRSDLESVVIA 61 (264)
Q Consensus 2 f~~~D~~d~~g~I~f~eF~~~ls~~~~g~~-~ekl~~~----F~~~D~d~~G~It~~El~~~l~~ 61 (264)
|+.+|- |+|+.|--.+....+..+.++.. ++...++ -.--|.||||.++..|++.++..
T Consensus 114 FkIYDf-d~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i~r 177 (189)
T KOG0038|consen 114 FKIYDF-DGDEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIEEADLDGDGKLSFAEFEHVILR 177 (189)
T ss_pred eEEeec-CCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Confidence 778994 99999999999999999986542 2333333 33348999999999999998754
No 98
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=94.25 E-value=0.096 Score=49.15 Aligned_cols=67 Identities=13% Similarity=0.159 Sum_probs=52.8
Q ss_pred HHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHh
Q 024668 33 EIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSW 112 (264)
Q Consensus 33 ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~ 112 (264)
..++..|...| |++|+|+..|+..++....... + -..+++++.++...+.+ .+|+|+||+|...
T Consensus 19 ~~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~--------g-~~~~eei~~~l~~~~~~------~~g~v~fe~f~~~ 82 (627)
T KOG0046|consen 19 RELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPL--------G-YFVREEIKEILGEVGVD------ADGRVEFEEFVGI 82 (627)
T ss_pred HHHHHHHHhhc-CCCCeeehHHhHHHHHHhcccc--------c-chhHHHHHHHHhccCCC------cCCccCHHHHHHH
Confidence 46778899999 9999999999998887653211 1 24578899999998664 7899999999996
Q ss_pred hhc
Q 024668 113 CTL 115 (264)
Q Consensus 113 ~~~ 115 (264)
+..
T Consensus 83 ~~~ 85 (627)
T KOG0046|consen 83 FLN 85 (627)
T ss_pred HHh
Confidence 654
No 99
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=93.62 E-value=0.18 Score=52.78 Aligned_cols=93 Identities=17% Similarity=0.235 Sum_probs=66.7
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhh-------CCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccc
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYE-------KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISE 73 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~-------~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~ 73 (264)
||.-||+ +.+|.+++.+|-..+..+. .|.++-..+.+.++.|.+.+|+|+.+|-..+|-+- +
T Consensus 2258 ~fkhFDk-ek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~----------E 2326 (2399)
T KOG0040|consen 2258 MFKHFDK-EKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISK----------E 2326 (2399)
T ss_pred HHHHhch-hhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhc----------c
Confidence 5788996 9999999999999887654 23333499999999999999999999887766431 1
Q ss_pred cCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHH
Q 024668 74 RGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRS 111 (264)
Q Consensus 74 ~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~ 111 (264)
...-...+.|+.-|+.++. +.-.|+.++-..
T Consensus 2327 TeNI~s~~eIE~AfraL~a-------~~~yvtke~~~~ 2357 (2399)
T KOG0040|consen 2327 TENILSSEEIEDAFRALDA-------GKPYVTKEELYQ 2357 (2399)
T ss_pred cccccchHHHHHHHHHhhc-------CCccccHHHHHh
Confidence 1111234478888888854 345677766433
No 100
>KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.60 E-value=0.16 Score=50.02 Aligned_cols=94 Identities=12% Similarity=0.266 Sum_probs=72.3
Q ss_pred CCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHh
Q 024668 10 NDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNA 89 (264)
Q Consensus 10 ~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~ 89 (264)
++| |+++||. ...++.+.+++..|+++|. ++|.++.+|+.++++.+....+ . ........+....++.+
T Consensus 1 ~~~-~~~~~~~-----~~~~~~d~~l~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~ 69 (646)
T KOG0039|consen 1 GEG-ISFQELK-----ITDCSYDDKLQTFFDMYDK-GDGKLTEEEVRELIMSSISANW-L---SLIKKQTEEYAALIMEE 69 (646)
T ss_pred CCC-cchhhhc-----ccCCChhHHHHHHHHHHhh-hcCCccHHHHHHHHHHHHHhhh-h---hhhhhhhhHHHHHhhhh
Confidence 356 9999999 5578889999999999998 9999999999999987765432 1 22224556777788888
Q ss_pred cccccCCcCCCCCCCCHHHHHHhhhcCchhh
Q 024668 90 ATFSKNGERSSNKSMSFEDFRSWCTLIPSAR 120 (264)
Q Consensus 90 ~d~d~~~~~~~dg~is~eeF~~~~~~~p~~~ 120 (264)
.+.+ ..|.+..+++.-.+...|...
T Consensus 70 ~~~~------~~~y~~~~~~~~ll~~~~~~~ 94 (646)
T KOG0039|consen 70 LDPD------HKGYITNEDLEILLLQIPTLL 94 (646)
T ss_pred cccc------ccceeeecchhHHHHhchHHH
Confidence 8664 556888888888888777543
No 101
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=93.44 E-value=0.052 Score=28.83 Aligned_cols=24 Identities=25% Similarity=0.407 Sum_probs=20.4
Q ss_pred CcccccccCCCcceeHHHHHHHHHH
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKAT 25 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~ 25 (264)
+|+.+|. +++|.|++.||..++..
T Consensus 5 ~f~~~d~-~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 5 AFRLFDK-DGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHCC-CCCCcEeHHHHHHHHHh
Confidence 4778995 99999999999998764
No 102
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=91.72 E-value=0.2 Score=44.48 Aligned_cols=59 Identities=12% Similarity=0.195 Sum_probs=51.1
Q ss_pred cccccccCCCcceeHHHHHHHHHHhh-CCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHH
Q 024668 2 FNLVTQKRNDHKLTFEDLVVAKATYE-KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIA 61 (264)
Q Consensus 2 f~~~D~~d~~g~I~f~eF~~~ls~~~-~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~ 61 (264)
|..+|+ |.++.|+-.|+-.+-..+. ......-.+-.|+..|.|+|-.|+..|++..|..
T Consensus 339 F~qLdk-N~nn~i~rrEwKpFK~~l~k~s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~ 398 (421)
T KOG4578|consen 339 FNQLDK-NSNNDIERREWKPFKRVLLKKSKPRKCSRKFFKYCDLNKDKKISLDEWRGCLGV 398 (421)
T ss_pred eeeecc-cccCccchhhcchHHHHHHhhccHHHHhhhcchhcccCCCceecHHHHhhhhcc
Confidence 788996 9999999999988877766 5566778889999999999999999999887754
No 103
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=91.64 E-value=0.56 Score=43.53 Aligned_cols=108 Identities=18% Similarity=0.271 Sum_probs=66.0
Q ss_pred cccccccCCCcceeHHHHHHHH-----HHhhCCCH---------HHHHHHh---hhhcccCCCCccCHHHHHHHHHHHHH
Q 024668 2 FNLVTQKRNDHKLTFEDLVVAK-----ATYEKGTK---------DEIEEFI---YQLLDVNDDGVLGRSDLESVVIAMLE 64 (264)
Q Consensus 2 f~~~D~~d~~g~I~f~eF~~~l-----s~~~~g~~---------~ekl~~~---F~~~D~d~~G~It~~El~~~l~~~~~ 64 (264)
|=..++ .+.|.|+..|..+.. ..+..... .+.-..+ |--+|.|.||.|++++|...-...
T Consensus 231 Fy~~nr-s~tG~iti~el~~snll~~l~~l~eEed~nq~~~~FS~e~f~viy~kFweLD~Dhd~lidk~~L~ry~d~t-- 307 (493)
T KOG2562|consen 231 FYYLNR-SRTGRITIQELLRSNLLDALLELDEEEDINQVTRYFSYEHFYVIYCKFWELDTDHDGLIDKEDLKRYGDHT-- 307 (493)
T ss_pred heeeCC-ccCCceeHHHHHHhHHHHHHHHHHHHhhhhhhhhheeHHHHHHHHHHHhhhccccccccCHHHHHHHhccc--
Confidence 334675 789999998877653 22221111 1222223 555599999999999998764332
Q ss_pred HHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhc-----Cchhhhhhhccc
Q 024668 65 IIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL-----IPSARKFLGGLL 127 (264)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~-----~p~~~~~l~~ll 127 (264)
.+..+++.+|+.... .-..-.+|+++|++|..++.. .|.-.+|..-+|
T Consensus 308 -------------lt~~ivdRIFs~v~r--~~~~~~eGrmdykdFv~FilA~e~k~t~~SleYwFrcl 360 (493)
T KOG2562|consen 308 -------------LTERIVDRIFSQVPR--GFTVKVEGRMDYKDFVDFILAEEDKDTPASLEYWFRCL 360 (493)
T ss_pred -------------hhhHHHHHHHhhccc--cceeeecCcccHHHHHHHHHHhccCCCccchhhheeee
Confidence 335688888883311 101116899999999888874 455555544443
No 104
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=91.49 E-value=0.13 Score=45.61 Aligned_cols=69 Identities=14% Similarity=0.317 Sum_probs=53.0
Q ss_pred HHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHh
Q 024668 33 EIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSW 112 (264)
Q Consensus 33 ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~ 112 (264)
..+.+.|..+|+|.++.|.+.|++-+=.-+... .-.++-...+++-.|. + +|.+||++|+...
T Consensus 333 Rvv~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~-----------s~~rkC~rk~~~yCDl--N----kDKkISl~Ew~~C 395 (421)
T KOG4578|consen 333 RVVHWYFNQLDKNSNNDIERREWKPFKRVLLKK-----------SKPRKCSRKFFKYCDL--N----KDKKISLDEWRGC 395 (421)
T ss_pred heeeeeeeeecccccCccchhhcchHHHHHHhh-----------ccHHHHhhhcchhccc--C----CCceecHHHHhhh
Confidence 478899999999999999999998764433331 2345667787888855 4 8999999999988
Q ss_pred hhcCch
Q 024668 113 CTLIPS 118 (264)
Q Consensus 113 ~~~~p~ 118 (264)
+...++
T Consensus 396 L~~~~~ 401 (421)
T KOG4578|consen 396 LGVEKE 401 (421)
T ss_pred hccccc
Confidence 876543
No 105
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=90.11 E-value=0.29 Score=34.46 Aligned_cols=68 Identities=7% Similarity=0.116 Sum_probs=48.3
Q ss_pred HHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhh
Q 024668 35 EEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCT 114 (264)
Q Consensus 35 l~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~ 114 (264)
++.+|+-|.. +.+.+|.++|.++|...-+ ......+.+..++.+...+. .....+.+|++.|..++.
T Consensus 2 i~~if~~ys~-~~~~mt~~~f~~FL~~eQ~----------~~~~~~~~~~~li~~~~~~~--~~~~~~~lt~~gF~~fL~ 68 (83)
T PF09279_consen 2 IEEIFRKYSS-DKEYMTAEEFRRFLREEQG----------EPRLTDEQAKELIEKFEPDE--RNRQKGQLTLEGFTRFLF 68 (83)
T ss_dssp HHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-----------TTSSHHHHHHHHHHHHHHH--HHHCTTEEEHHHHHHHHH
T ss_pred HHHHHHHHhC-CCCcCCHHHHHHHHHHHhc----------cccCcHHHHHHHHHHHccch--hhcccCCcCHHHHHHHHC
Confidence 5778999965 7899999999999875321 11235677777777764421 111468999999999997
Q ss_pred c
Q 024668 115 L 115 (264)
Q Consensus 115 ~ 115 (264)
.
T Consensus 69 S 69 (83)
T PF09279_consen 69 S 69 (83)
T ss_dssp S
T ss_pred C
Confidence 5
No 106
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=89.11 E-value=0.55 Score=49.44 Aligned_cols=72 Identities=11% Similarity=0.167 Sum_probs=52.9
Q ss_pred HHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhh
Q 024668 34 IEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWC 113 (264)
Q Consensus 34 kl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~ 113 (264)
....+|+-||.+.+|.++.++|+.+|++++-.. +...+...+...+.++..+|. + .+|.|+..+|..+|
T Consensus 2254 EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~l-----pmvEe~~~~p~fe~~ld~vDP--~----r~G~Vsl~dY~afm 2322 (2399)
T KOG0040|consen 2254 EFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDL-----PMVEEGEPEPEFEEILDLVDP--N----RDGYVSLQDYMAFM 2322 (2399)
T ss_pred HHHHHHHHhchhhccCCcHHHHHHHHHhcCCCC-----cccccCCCChhHHHHHHhcCC--C----CcCcccHHHHHHHH
Confidence 345689999999999999999999888764211 000111223467788888855 4 79999999999999
Q ss_pred hcC
Q 024668 114 TLI 116 (264)
Q Consensus 114 ~~~ 116 (264)
-..
T Consensus 2323 i~~ 2325 (2399)
T KOG0040|consen 2323 ISK 2325 (2399)
T ss_pred Hhc
Confidence 874
No 107
>KOG4286 consensus Dystrophin-like protein [Cell motility; Signal transduction mechanisms; Cytoskeleton]
Probab=88.75 E-value=1.1 Score=44.05 Aligned_cols=114 Identities=11% Similarity=0.179 Sum_probs=78.3
Q ss_pred cccccccCCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhccccc--ccCCCch
Q 024668 2 FNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEIS--ERGSNSH 79 (264)
Q Consensus 2 f~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~--~~~~~~~ 79 (264)
.++|| +..+|.|.--+|-+++..+|+...++|++.+|+..-.++.-.+ ...|..++..+...- ..-+. .-|-..+
T Consensus 476 lNvyD-~~R~g~irvls~ki~~i~lck~~leek~~ylF~~vA~~~sq~~-q~~l~lLL~dliqip-r~lGE~aAfGgsNv 552 (966)
T KOG4286|consen 476 LNVYD-TGRTGRIRVLSFKIGIISLCKAHLEDKYRYLFKQVASSTSQCD-QRRLGLLLHDLIQIP-RQLGEVAAFGGSNI 552 (966)
T ss_pred HHhcc-cCCCcceEEeeehhhHHHHhcchhHHHHHHHHHHHcCchhhHH-HHHHHHHHHHHHHHH-HHHhHHHhhcCCCC
Confidence 47899 4899999999999999999999999999999999986666554 666666655443210 00000 0010122
Q ss_pred HHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhcCchhhhhhhcc
Q 024668 80 QDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTLIPSARKFLGGL 126 (264)
Q Consensus 80 ~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~~p~~~~~l~~l 126 (264)
+--++.-|... + +.-.|++..|..|+..-|...-+|-.+
T Consensus 553 epsvrsCF~~v----~----~~pei~~~~f~dw~~~epqsmVwL~vl 591 (966)
T KOG4286|consen 553 EPSVRSCFQFV----N----NKPEIEAALFLDWMRLEPQSMVWLPVL 591 (966)
T ss_pred ChHHHHHHHhc----C----CCCcchHHHHHHHhccCcchhhHHHHH
Confidence 33344445433 2 456899999999999999887776554
No 108
>PLN02952 phosphoinositide phospholipase C
Probab=88.69 E-value=3.1 Score=40.51 Aligned_cols=96 Identities=7% Similarity=0.186 Sum_probs=60.6
Q ss_pred CCCcceeHHHHHHHHHHhh--CCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHH
Q 024668 9 RNDHKLTFEDLVVAKATYE--KGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVF 86 (264)
Q Consensus 9 d~~g~I~f~eF~~~ls~~~--~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l 86 (264)
++.|.++|++|.+....+. .......+..+|.-|-. +++.++.++|..+|...-+. .....+.+..+
T Consensus 12 ~~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~-~~~~mt~~~l~~FL~~~Q~e----------~~~~~~~~~~i 80 (599)
T PLN02952 12 NDSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSV-GGGHMGADQLRRFLVLHQDE----------LDCTLAEAQRI 80 (599)
T ss_pred ccCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhC-CCCccCHHHHHHHHHHhCCC----------cCCCHHHHHHH
Confidence 4578999999988777664 23356788999999965 44789999999998764321 11223334444
Q ss_pred HHhcccccC-CcCCCCCCCCHHHHHHhhhc
Q 024668 87 LNAATFSKN-GERSSNKSMSFEDFRSWCTL 115 (264)
Q Consensus 87 ~~~~d~d~~-~~~~~dg~is~eeF~~~~~~ 115 (264)
+.++..... ...-+.+.++++.|..++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~F~~~l~s 110 (599)
T PLN02952 81 VEEVINRRHHVTRYTRHGLNLDDFFHFLLY 110 (599)
T ss_pred HHHHHhhccccccccccCcCHHHHHHHHcC
Confidence 333210000 00003456999999999975
No 109
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=87.59 E-value=1 Score=40.37 Aligned_cols=62 Identities=18% Similarity=0.326 Sum_probs=50.8
Q ss_pred HHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHH
Q 024668 32 DEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRS 111 (264)
Q Consensus 32 ~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~ 111 (264)
..-+-+.|.-+|.|.||.++..||+.+-. ...+.-|+.+|+..|.. .||.||-+||+.
T Consensus 249 Kds~gWMFnklD~N~Dl~Ld~sEl~~I~l----------------dknE~CikpFfnsCD~~------kDg~iS~~EWC~ 306 (434)
T KOG3555|consen 249 KDSLGWMFNKLDTNYDLLLDQSELRAIEL----------------DKNEACIKPFFNSCDTY------KDGSISTNEWCY 306 (434)
T ss_pred hhhhhhhhhccccccccccCHHHhhhhhc----------------cCchhHHHHHHhhhccc------ccCccccchhhh
Confidence 46688999999999999999999976421 12356788999999763 789999999999
Q ss_pred hhhc
Q 024668 112 WCTL 115 (264)
Q Consensus 112 ~~~~ 115 (264)
.+++
T Consensus 307 CF~k 310 (434)
T KOG3555|consen 307 CFQK 310 (434)
T ss_pred hhcc
Confidence 8887
No 110
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=86.45 E-value=1.1 Score=44.33 Aligned_cols=65 Identities=14% Similarity=0.136 Sum_probs=47.4
Q ss_pred HHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHH
Q 024668 31 KDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFR 110 (264)
Q Consensus 31 ~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~ 110 (264)
..-|.+.+|+..|+...|++|...=+.+|... ...+.....+....|.| +||+++.+||+
T Consensus 193 ~klKY~QlFNa~DktrsG~Lsg~qaR~aL~qS--------------~Lpq~~LA~IW~LsDvd------~DGkL~~dEfi 252 (1118)
T KOG1029|consen 193 NKLKYRQLFNALDKTRSGYLSGQQARSALGQS--------------GLPQNQLAHIWTLSDVD------GDGKLSADEFI 252 (1118)
T ss_pred hhhHHHHHhhhcccccccccccHHHHHHHHhc--------------CCchhhHhhheeeeccC------CCCcccHHHHH
Confidence 45688999999999999999988776655321 12344555666666553 89999999998
Q ss_pred Hhhhc
Q 024668 111 SWCTL 115 (264)
Q Consensus 111 ~~~~~ 115 (264)
-.+..
T Consensus 253 lam~l 257 (1118)
T KOG1029|consen 253 LAMHL 257 (1118)
T ss_pred HHHHH
Confidence 76653
No 111
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=81.70 E-value=3.9 Score=37.81 Aligned_cols=30 Identities=23% Similarity=0.455 Sum_probs=26.7
Q ss_pred HHHhhhhcccCCCCccCHHHHHHHHHHHHH
Q 024668 35 EEFIYQLLDVNDDGVLGRSDLESVVIAMLE 64 (264)
Q Consensus 35 l~~~F~~~D~d~~G~It~~El~~~l~~~~~ 64 (264)
...+|+.+|.|+||.|+.+||.+.+....+
T Consensus 359 ~~~~F~~~D~d~DG~Is~eEf~~~~~~~~~ 388 (391)
T PRK12309 359 SDAVFDALDLNHDGKITPEEMRAGLGAALR 388 (391)
T ss_pred HHHHHHHhCCCCCCCCcHHHHHHHHHHHHH
Confidence 467899999999999999999999887654
No 112
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=81.14 E-value=2.2 Score=37.75 Aligned_cols=70 Identities=20% Similarity=0.384 Sum_probs=46.1
Q ss_pred HhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHH-------HHHHHHhcccccCCcCCCCCCCCHHHH
Q 024668 37 FIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDI-------VDVFLNAATFSKNGERSSNKSMSFEDF 109 (264)
Q Consensus 37 ~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~-------v~~l~~~~d~d~~~~~~~dg~is~eeF 109 (264)
-.|.+.|.|+||.+.-.||..+...-+.-+..-.+.+ ..+.++ -+.+++.+|. + .|.-||.+||
T Consensus 248 TFF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNee---DDM~EmeEErlRMREHVMk~vDt--N----qDRlvtleEF 318 (442)
T KOG3866|consen 248 TFFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEE---DDMKEMEEERLRMREHVMKQVDT--N----QDRLVTLEEF 318 (442)
T ss_pred hheeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcc---hHHHHHHHHHHHHHHHHHHhccc--c----hhhhhhHHHH
Confidence 4688889999999999999888766554433322222 122222 2344556654 3 7889999999
Q ss_pred HHhhhc
Q 024668 110 RSWCTL 115 (264)
Q Consensus 110 ~~~~~~ 115 (264)
..--.+
T Consensus 319 L~~t~~ 324 (442)
T KOG3866|consen 319 LNDTDN 324 (442)
T ss_pred Hhhhhh
Confidence 876654
No 113
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=80.54 E-value=1.4 Score=30.20 Aligned_cols=28 Identities=18% Similarity=0.208 Sum_probs=24.4
Q ss_pred HHHHHHHhhhhcccCCCCccCHHHHHHHH
Q 024668 31 KDEIEEFIYQLLDVNDDGVLGRSDLESVV 59 (264)
Q Consensus 31 ~~ekl~~~F~~~D~d~~G~It~~El~~~l 59 (264)
..|.+..+|+.+ .++.++||.+||++.+
T Consensus 4 s~eqv~~aFr~l-A~~KpyVT~~dLr~~l 31 (69)
T PF08726_consen 4 SAEQVEEAFRAL-AGGKPYVTEEDLRRSL 31 (69)
T ss_dssp TCHHHHHHHHHH-CTSSSCEEHHHHHHHS
T ss_pred CHHHHHHHHHHH-HcCCCcccHHHHHHHc
Confidence 457899999999 7899999999998853
No 114
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=79.32 E-value=4.2 Score=40.22 Aligned_cols=61 Identities=8% Similarity=0.217 Sum_probs=49.1
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHH
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAM 62 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~ 62 (264)
+|+..|+ +++|.++|.+=...+..+-..-.+.+++.+|+-.|..++|.+..+++.++-...
T Consensus 141 ~~~~ad~-~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~ 201 (746)
T KOG0169|consen 141 IFQEADK-NKNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKEL 201 (746)
T ss_pred HHHHHcc-ccccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhh
Confidence 3678895 999999999988887766555567888888888888899999999888765443
No 115
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=79.25 E-value=4.2 Score=30.77 Aligned_cols=55 Identities=20% Similarity=0.282 Sum_probs=40.1
Q ss_pred cccccccCCCcceeHHHHHHHHHHhhC----CC------HH-H---HHHHhhhhcccCCCCccCHHHHHH
Q 024668 2 FNLVTQKRNDHKLTFEDLVVAKATYEK----GT------KD-E---IEEFIYQLLDVNDDGVLGRSDLES 57 (264)
Q Consensus 2 f~~~D~~d~~g~I~f~eF~~~ls~~~~----g~------~~-e---kl~~~F~~~D~d~~G~It~~El~~ 57 (264)
|+..|- |+++.++=-|.+.++...-. |. .+ | .+..+.+=-|.|+||+|...|+.+
T Consensus 73 F~MHDl-dknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK 141 (144)
T KOG4065|consen 73 FSMHDL-DKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLK 141 (144)
T ss_pred hhhhcc-CcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHh
Confidence 778895 99999999999999887653 21 12 2 233334444788999999999865
No 116
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=79.03 E-value=1.7 Score=38.97 Aligned_cols=55 Identities=18% Similarity=0.217 Sum_probs=46.5
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHH
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVI 60 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~ 60 (264)
||+..| ++.|+.++..|... +..+..|.-++-.|++.|...||.|+-.|+.....
T Consensus 255 MFnklD-~N~Dl~Ld~sEl~~----I~ldknE~CikpFfnsCD~~kDg~iS~~EWC~CF~ 309 (434)
T KOG3555|consen 255 MFNKLD-TNYDLLLDQSELRA----IELDKNEACIKPFFNSCDTYKDGSISTNEWCYCFQ 309 (434)
T ss_pred hhhccc-cccccccCHHHhhh----hhccCchhHHHHHHhhhcccccCccccchhhhhhc
Confidence 799999 59999999988644 34566788899999999999999999999977653
No 117
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=77.40 E-value=11 Score=35.76 Aligned_cols=91 Identities=18% Similarity=0.235 Sum_probs=59.1
Q ss_pred cccccCCCcceeHHHHHHHHHHhhC--CCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHH
Q 024668 4 LVTQKRNDHKLTFEDLVVAKATYEK--GTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQD 81 (264)
Q Consensus 4 ~~D~~d~~g~I~f~eF~~~ls~~~~--g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~ 81 (264)
..++ +|....+=++|+...-.+.. .-..+..+.+=.+-|.-.||-|+.+|++.+ +.++= ..+.
T Consensus 44 s~e~-~ge~~mt~edFv~~ylgL~~e~~~n~~~v~Lla~iaD~tKDglisf~eF~af-e~~lC-------------~pDa 108 (694)
T KOG0751|consen 44 SIEK-NGESYMTPEDFVRRYLGLYNESNFNDKIVRLLASIADQTKDGLISFQEFRAF-ESVLC-------------APDA 108 (694)
T ss_pred HHhh-ccccccCHHHHHHHHHhhcccccCChHHHHHHHhhhhhcccccccHHHHHHH-Hhhcc-------------CchH
Confidence 3453 67778899999998766552 223455666666668788999999999653 32221 1123
Q ss_pred HHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhc
Q 024668 82 IVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 115 (264)
Q Consensus 82 ~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~ 115 (264)
.....|..+|. . ++|.+|++++.+.+..
T Consensus 109 l~~~aFqlFDr--~----~~~~vs~~~~~~if~~ 136 (694)
T KOG0751|consen 109 LFEVAFQLFDR--L----GNGEVSFEDVADIFGQ 136 (694)
T ss_pred HHHHHHHHhcc--c----CCCceehHHHHHHHhc
Confidence 34445556633 3 6788888888887775
No 118
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=73.81 E-value=5.1 Score=42.43 Aligned_cols=58 Identities=19% Similarity=0.360 Sum_probs=43.7
Q ss_pred hhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhc
Q 024668 39 YQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 115 (264)
Q Consensus 39 F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~ 115 (264)
|+-||.||.|.|+++|+.+.|+.-- .-++..++-+++-+..| .+..++|++|.+-+..
T Consensus 4063 fkeydpdgkgiiskkdf~kame~~k-------------~ytqse~dfllscae~d------end~~~y~dfv~rfhe 4120 (5019)
T KOG2243|consen 4063 FKEYDPDGKGIISKKDFHKAMEGHK-------------HYTQSEIDFLLSCAEAD------ENDMFDYEDFVDRFHE 4120 (5019)
T ss_pred chhcCCCCCccccHHHHHHHHhccc-------------cchhHHHHHHHHhhccC------ccccccHHHHHHHhcC
Confidence 5666999999999999999876421 23456777777777654 4678999999887664
No 119
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=71.79 E-value=11 Score=35.95 Aligned_cols=60 Identities=17% Similarity=0.122 Sum_probs=48.0
Q ss_pred cccccccCCCcceeHHHHHHHHHHhhCC--C-HHHHHHHhhhhcccCCCCccCHHHHHHHHHHHH
Q 024668 2 FNLVTQKRNDHKLTFEDLVVAKATYEKG--T-KDEIEEFIYQLLDVNDDGVLGRSDLESVVIAML 63 (264)
Q Consensus 2 f~~~D~~d~~g~I~f~eF~~~ls~~~~g--~-~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~ 63 (264)
|...| |++|.|+..|....+...... . .++.++.+-.-.+.|.+|.|+.+|+..++..+.
T Consensus 25 F~~~d--~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l~ 87 (627)
T KOG0046|consen 25 FNKLD--DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLNLK 87 (627)
T ss_pred HHhhc--CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHhhh
Confidence 45666 789999999999998876532 2 367888888999999999999999988665543
No 120
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=71.00 E-value=5.4 Score=39.64 Aligned_cols=56 Identities=21% Similarity=0.276 Sum_probs=42.1
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHH
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVV 59 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l 59 (264)
+|+..|+ .-+|.++= +..--.....+-+...+--++.+-|+|+||.++.+|+.-.|
T Consensus 200 lFNa~Dk-trsG~Lsg--~qaR~aL~qS~Lpq~~LA~IW~LsDvd~DGkL~~dEfilam 255 (1118)
T KOG1029|consen 200 LFNALDK-TRSGYLSG--QQARSALGQSGLPQNQLAHIWTLSDVDGDGKLSADEFILAM 255 (1118)
T ss_pred Hhhhccc-cccccccc--HHHHHHHHhcCCchhhHhhheeeeccCCCCcccHHHHHHHH
Confidence 5888997 77888873 33332233356677788999999999999999999996544
No 121
>KOG4301 consensus Beta-dystrobrevin [Cytoskeleton]
Probab=70.24 E-value=3.6 Score=36.92 Aligned_cols=101 Identities=11% Similarity=0.144 Sum_probs=65.6
Q ss_pred ccccccCCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHH
Q 024668 3 NLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDI 82 (264)
Q Consensus 3 ~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~ 82 (264)
.++|. .|.|.++-----.+++.+|.|...+|++.+|.+.. |.+|.+..-.+-+++..++.. -..........-++..
T Consensus 117 aA~ds-~~~g~~~vfavkialatlc~gk~~dklryIfs~is-ds~gim~~i~~~~fl~evlsl-pT~v~e~psfg~te~~ 193 (434)
T KOG4301|consen 117 AAEDS-EGQGKQQVFAVKIALATLCGGKIKDKLRYIFSLIS-DSRGIMQEIQRDQFLHEVLSL-PTAVFEGPSFGYTELS 193 (434)
T ss_pred hhcCc-cCCCCceeecchhhhhhhccchHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHHHcC-CchhhcCCCcchHHHH
Confidence 46784 88888887777778888899999999999999987 467876666666666555431 0000001111112222
Q ss_pred HHHHHHhcccccCCcCCCCCCCCHHHHHHhhhcCc
Q 024668 83 VDVFLNAATFSKNGERSSNKSMSFEDFRSWCTLIP 117 (264)
Q Consensus 83 v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~~p 117 (264)
++.-|. .+.+++++.|.+.+..+|
T Consensus 194 a~~cf~-----------qqrKv~Ln~fldtl~sdp 217 (434)
T KOG4301|consen 194 ARLCFL-----------QQRKVELNQFLDTLMSDP 217 (434)
T ss_pred HHHHHH-----------HHHHHHHHHHHHHHhcCC
Confidence 322111 467899999999999876
No 122
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=68.54 E-value=15 Score=25.20 Aligned_cols=51 Identities=8% Similarity=0.060 Sum_probs=37.6
Q ss_pred CcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHH
Q 024668 11 DHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLE 64 (264)
Q Consensus 11 ~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~ 64 (264)
+-.|.|.....+++..... .++..+...|+.=..+.|+++||.+.++.+.+
T Consensus 6 sp~~~F~~L~~~l~~~l~~---~~~~~l~~~Y~~~k~~kIsR~~fvr~lR~IVG 56 (70)
T PF12174_consen 6 SPWMPFPMLFSALSKHLPP---SKMDLLQKHYEEFKKKKISREEFVRKLRQIVG 56 (70)
T ss_pred CCcccHHHHHHHHHHHCCH---HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 4467888887777776543 35666666665456799999999999998876
No 123
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=68.40 E-value=16 Score=29.64 Aligned_cols=37 Identities=3% Similarity=-0.010 Sum_probs=28.8
Q ss_pred chHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhcCchhh
Q 024668 78 SHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTLIPSAR 120 (264)
Q Consensus 78 ~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~~p~~~ 120 (264)
-..+..+++|++.+.+ +.+.+|+.|..+++..+....
T Consensus 93 Fvp~kFe~iF~kya~~------~~d~LT~~E~~~m~~~nr~~~ 129 (174)
T PF05042_consen 93 FVPQKFEEIFSKYAKT------GPDALTLRELWRMLKGNRNAN 129 (174)
T ss_pred CCHHHHHHHHHHhCCC------CCCCcCHHHHHHHHHhccccC
Confidence 4567899999999653 568899999999998765443
No 124
>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]. The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.
Probab=65.28 E-value=7.6 Score=20.03 Aligned_cols=15 Identities=47% Similarity=0.623 Sum_probs=9.7
Q ss_pred ccCCCCccCHHHHHH
Q 024668 43 DVNDDGVLGRSDLES 57 (264)
Q Consensus 43 D~d~~G~It~~El~~ 57 (264)
|.|+||.|+.-++..
T Consensus 1 DvN~DG~vna~D~~~ 15 (21)
T PF00404_consen 1 DVNGDGKVNAIDLAL 15 (21)
T ss_dssp -TTSSSSSSHHHHHH
T ss_pred CCCCCCcCCHHHHHH
Confidence 567777777776644
No 125
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=62.85 E-value=25 Score=35.04 Aligned_cols=79 Identities=10% Similarity=0.114 Sum_probs=53.0
Q ss_pred HHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHH
Q 024668 32 DEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRS 111 (264)
Q Consensus 32 ~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~ 111 (264)
+..+.-+|+..|++.+|.++..+...++..+-. ...+..+..+|++.+. . +++++..++|.+
T Consensus 135 ~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~------------~l~~~~~~~~f~e~~~--~----~~~k~~~~~~~~ 196 (746)
T KOG0169|consen 135 EHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNV------------QLSESKARRLFKESDN--S----QTGKLEEEEFVK 196 (746)
T ss_pred HHHHHHHHHHHccccccccchhhHHHHHHHHHH------------hhhHHHHHHHHHHHHh--h----ccceehHHHHHH
Confidence 457778899999999999999999888776533 2334566666776633 2 677777776655
Q ss_pred hhhc---CchhhhhhhcccC
Q 024668 112 WCTL---IPSARKFLGGLLT 128 (264)
Q Consensus 112 ~~~~---~p~~~~~l~~ll~ 128 (264)
+... -|.+...+.....
T Consensus 197 ~~~~~~~rpev~~~f~~~s~ 216 (746)
T KOG0169|consen 197 FRKELTKRPEVYFLFVQYSH 216 (746)
T ss_pred HHHhhccCchHHHHHHHHhC
Confidence 5543 5655554444433
No 126
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=62.18 E-value=11 Score=29.93 Aligned_cols=65 Identities=11% Similarity=0.203 Sum_probs=44.3
Q ss_pred HHhhhhc---ccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHh
Q 024668 36 EFIYQLL---DVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSW 112 (264)
Q Consensus 36 ~~~F~~~---D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~ 112 (264)
+.+|..| -..+...++...|.++++.+.-. + .......++.+|.++... +..+|+|++|...
T Consensus 2 ~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~-------d--~k~t~tdvDiiF~Kvk~k------~~~~I~f~~F~~a 66 (154)
T PF05517_consen 2 EAVFKAFASFGKKNGTEMDSKNFAKLCKDCGII-------D--KKLTSTDVDIIFSKVKAK------GARKITFEQFLEA 66 (154)
T ss_dssp HHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS-----------SSS-HHHHHHHHHHHT-S------S-SEEEHHHHHHH
T ss_pred HHHHHHHHHhcCCccccccHHHHHHHHHHcCCC-------C--CCCchHHHHHHHHHhhcC------CCcccCHHHHHHH
Confidence 4555555 24566778999999998876321 1 136678899999997441 4567999999998
Q ss_pred hhc
Q 024668 113 CTL 115 (264)
Q Consensus 113 ~~~ 115 (264)
+..
T Consensus 67 L~~ 69 (154)
T PF05517_consen 67 LAE 69 (154)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
No 127
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=60.95 E-value=24 Score=34.55 Aligned_cols=96 Identities=14% Similarity=0.144 Sum_probs=58.1
Q ss_pred eeHHHHHHHHHHhhC-CCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhccc
Q 024668 14 LTFEDLVVAKATYEK-GTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATF 92 (264)
Q Consensus 14 I~f~eF~~~ls~~~~-g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~ 92 (264)
|+|+.|......+.. ....--++-+|+.+|.+++|.||.+++..-+..+... ..-+.+.-+++-.+.
T Consensus 535 i~~~~f~~~f~~l~pw~~s~~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~~------------~~~ek~~l~y~lh~~ 602 (671)
T KOG4347|consen 535 IDYAQFLEVFRELLPWAVSLIFLERLFRLLDDSMTGLLTFKDLVSGLSILKAG------------DALEKLKLLYKLHDP 602 (671)
T ss_pred HHHhhHHHHhhccCchhHHHHHHHHHHHhcccCCcceeEHHHHHHHHHHHHhh------------hHHHHHHHHHhhccC
Confidence 555555555444431 1234567888999999999999999998877665431 233455666666655
Q ss_pred ccCCcCCCCCCCCHHHHHHhhhcCchhhhhhhcccCCC
Q 024668 93 SKNGERSSNKSMSFEDFRSWCTLIPSARKFLGGLLTPP 130 (264)
Q Consensus 93 d~~~~~~~dg~is~eeF~~~~~~~p~~~~~l~~ll~~~ 130 (264)
. ++ ....++- ....+|.+......++..+
T Consensus 603 p------~~-~~d~e~~--~~e~~~~~~~~~~~~l~~~ 631 (671)
T KOG4347|consen 603 P------AD-ELDREEV--SLECCPELATEITEVLGSP 631 (671)
T ss_pred C------cc-ccccccc--ccccChhhhHHHHHHhCCC
Confidence 3 34 4444443 2222366766666666643
No 128
>TIGR01848 PHA_reg_PhaR polyhydroxyalkanoate synthesis repressor PhaR. Poly-B-hydroxyalkanoates are lipidlike carbon/energy storage polymers found in granular inclusions. PhaR is a regulatory protein found in general near other proteins associated with polyhydroxyalkanoate (PHA) granule biosynthesis and utilization. It is found to be a DNA-binding homotetramer that is also capable of binding short chain hydroxyalkanoic acids and PHA granules. PhaR may regulate the expression of itself, of the phasins that coat granules, and of enzymes that direct carbon flux into polymers stored in granules.
Probab=54.76 E-value=28 Score=25.89 Aligned_cols=68 Identities=15% Similarity=0.182 Sum_probs=42.3
Q ss_pred hhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhc
Q 024668 40 QLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 115 (264)
Q Consensus 40 ~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~ 115 (264)
++||.+.+-+||.+++.+++..--. ........++..++...-+++.+... . +...++.+-..+.++-
T Consensus 10 RLYDT~tS~YITLedi~~lV~~g~~--f~V~DakTgeDiT~~iL~QII~E~E~--~----g~~~lp~~~L~qlIr~ 77 (107)
T TIGR01848 10 RLYDTETSSYVTLEDIRDLVREGRE--FQVVDSKSGDDLTRSILLQIIAEEES--G----GEPVLSTDFLTQIIRF 77 (107)
T ss_pred cccCCCccceeeHHHHHHHHHCCCe--EEEEECCCCchhHHHHHHHHHHHHHh--C----CCCCCCHHHHHHHHHH
Confidence 5789999999999999998764322 11112223445666666666666533 2 4556777666666665
No 129
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=54.64 E-value=10 Score=26.39 Aligned_cols=58 Identities=12% Similarity=0.164 Sum_probs=41.8
Q ss_pred cccccccCCCcceeHHHHHHHHHHhhCC--CHHHHHHHhhhhcccC----CCCccCHHHHHHHHHH
Q 024668 2 FNLVTQKRNDHKLTFEDLVVAKATYEKG--TKDEIEEFIYQLLDVN----DDGVLGRSDLESVVIA 61 (264)
Q Consensus 2 f~~~D~~d~~g~I~f~eF~~~ls~~~~g--~~~ekl~~~F~~~D~d----~~G~It~~El~~~l~~ 61 (264)
|+.+- .+.+.|+.++|...|..--+. ...+.++.++.-|..+ ..+.+|.++|..+|.+
T Consensus 6 f~~ys--~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S 69 (83)
T PF09279_consen 6 FRKYS--SDKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFS 69 (83)
T ss_dssp HHHHC--TTSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHS
T ss_pred HHHHh--CCCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCC
Confidence 45553 368899999999999765433 2467777777777544 4788999999888753
No 130
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=49.72 E-value=18 Score=32.42 Aligned_cols=71 Identities=7% Similarity=0.035 Sum_probs=51.9
Q ss_pred HHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHH
Q 024668 32 DEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRS 111 (264)
Q Consensus 32 ~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~ 111 (264)
.++++-.|.+||.+++|.++..|-...+.-+- +.+.+..++..-|+.++.+ .||.+.-+++.-
T Consensus 258 sd~l~~~f~LFde~~tg~~D~re~v~~lavlc-----------~p~~t~~iiq~afk~f~v~------eDg~~ge~~ls~ 320 (412)
T KOG4666|consen 258 SDKLAPTFMLFDEGTTGNGDYRETVKTLAVLC-----------GPPVTPVIIQYAFKRFSVA------EDGISGEHILSL 320 (412)
T ss_pred hhhhhhhhheecCCCCCcccHHHHhhhheeee-----------CCCCcHHHHHHHHHhcccc------cccccchHHHHH
Confidence 47999999999999999999776554433221 1246677888889988664 689888888877
Q ss_pred hhhcCchh
Q 024668 112 WCTLIPSA 119 (264)
Q Consensus 112 ~~~~~p~~ 119 (264)
.++..-.+
T Consensus 321 ilq~~lgv 328 (412)
T KOG4666|consen 321 ILQVVLGV 328 (412)
T ss_pred HHHHhcCc
Confidence 77754433
No 131
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=48.03 E-value=26 Score=28.53 Aligned_cols=30 Identities=13% Similarity=0.052 Sum_probs=27.2
Q ss_pred HHHHHHhhhhcccCCCCccCHHHHHHHHHH
Q 024668 32 DEIEEFIYQLLDVNDDGVLGRSDLESVVIA 61 (264)
Q Consensus 32 ~ekl~~~F~~~D~d~~G~It~~El~~~l~~ 61 (264)
.+|.+.+|..|+..+.+.+|..|+.+|++.
T Consensus 95 p~kFe~iF~kya~~~~d~LT~~E~~~m~~~ 124 (174)
T PF05042_consen 95 PQKFEEIFSKYAKTGPDALTLRELWRMLKG 124 (174)
T ss_pred HHHHHHHHHHhCCCCCCCcCHHHHHHHHHh
Confidence 389999999999988899999999998875
No 132
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=43.28 E-value=90 Score=25.94 Aligned_cols=80 Identities=18% Similarity=0.160 Sum_probs=48.8
Q ss_pred CCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHH
Q 024668 9 RNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLN 88 (264)
Q Consensus 9 d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~ 88 (264)
|=||+|+.+++...+..-. |..+.+ ++++.=-++.||.. +.+..+++++. ...++.++.+++
T Consensus 9 DFDGTITl~Ds~~~itdtf-~~~e~k-----~l~~~vls~tiS~r---d~~g~mf~~i~---------~s~~Eile~llk 70 (220)
T COG4359 9 DFDGTITLNDSNDYITDTF-GPGEWK-----ALKDGVLSKTISFR---DGFGRMFGSIH---------SSLEEILEFLLK 70 (220)
T ss_pred cCCCceEecchhHHHHhcc-CchHHH-----HHHHHHhhCceeHH---HHHHHHHHhcC---------CCHHHHHHHHHh
Confidence 6689999999999876532 223333 33333346777743 34444444311 233667777777
Q ss_pred hcccccCCcCCCCCCCCHHHHHHhhhcC
Q 024668 89 AATFSKNGERSSNKSMSFEDFRSWCTLI 116 (264)
Q Consensus 89 ~~d~d~~~~~~~dg~is~eeF~~~~~~~ 116 (264)
.+..| =.+.||..|+..+
T Consensus 71 ~i~Id----------p~fKef~e~ike~ 88 (220)
T COG4359 71 DIKID----------PGFKEFVEWIKEH 88 (220)
T ss_pred hcccC----------ccHHHHHHHHHHc
Confidence 66543 2489999999874
No 133
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=42.45 E-value=66 Score=21.23 Aligned_cols=34 Identities=9% Similarity=0.098 Sum_probs=24.0
Q ss_pred CHHHHHHHhhhhc--ccCCCCccCHHHHHHHHHHHHH
Q 024668 30 TKDEIEEFIYQLL--DVNDDGVLGRSDLESVVIAMLE 64 (264)
Q Consensus 30 ~~~ekl~~~F~~~--D~d~~G~It~~El~~~l~~~~~ 64 (264)
-+-+|+....+++ +. +...++.+||+.++.....
T Consensus 12 l~l~RIh~mLkmf~~~~-~~~~~s~~eL~~fL~~lv~ 47 (60)
T PF08672_consen 12 LPLDRIHSMLKMFPKDP-GGYDISLEELQEFLDRLVE 47 (60)
T ss_dssp EEHHHHHHHHHHH-GGG---TT--HHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhccCCC-CCCCCCHHHHHHHHHHHHH
Confidence 3468899999999 54 5566899999999987765
No 134
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=41.81 E-value=27 Score=33.82 Aligned_cols=64 Identities=16% Similarity=0.132 Sum_probs=48.1
Q ss_pred HHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhh
Q 024668 34 IEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWC 113 (264)
Q Consensus 34 kl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~ 113 (264)
+.+.-|..+|.|..|+++.+++.++|++... ...++..+.++++++. + .+|.++.+||.+.+
T Consensus 594 ~~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~------------~~d~~~~~~~l~ea~~--~----~~g~v~l~e~~q~~ 655 (680)
T KOG0042|consen 594 RRKTRFAFLDADKKAYQAIADVLKVLKSENV------------GWDEDRLHEELQEADE--N----LNGFVELREFLQLM 655 (680)
T ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHHHhcC------------CCCHHHHHHHHHHHHH--h----hcceeeHHHHHHHH
Confidence 4446688899999999999999888876541 2345677777887744 3 57999999998877
Q ss_pred hc
Q 024668 114 TL 115 (264)
Q Consensus 114 ~~ 115 (264)
..
T Consensus 656 s~ 657 (680)
T KOG0042|consen 656 SA 657 (680)
T ss_pred HH
Confidence 64
No 135
>cd08324 CARD_NOD1_CARD4 Caspase activation and recruitment domain similar to that found in NOD1. Caspase activation and recruitment domain (CARD) found in human NOD1 (CARD4) and similar proteins. NOD1 is a member of the Nod-like receptor (NLR) family, which plays a central role in the innate immune response. NLRs typically contain an N-terminal effector domain, a central nucleotide-binding domain and a C-terminal ligand-binding region of several leucine-rich repeats (LRRs). In NOD1, as well as NOD2, the N-terminal effector domain is a CARD. Nod1-CARD has been shown to interact with the CARD domain of the downstream effector RICK (RIP2, CARDIAK), a serine/threonine kinase. In general, CARDs are death domains (DDs) found associated with caspases. They are known to be important in the signaling pathways for apoptosis, inflammation, and host-defense mechanisms. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form hom
Probab=40.86 E-value=84 Score=22.39 Aligned_cols=52 Identities=13% Similarity=0.100 Sum_probs=37.8
Q ss_pred CCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHH
Q 024668 10 NDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEII 66 (264)
Q Consensus 10 ~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~ 66 (264)
++|.|+-+|+-..-+ ..+..+|++.+++..- -.|..-.+=|.+++..+.+.+
T Consensus 26 ~n~~it~E~y~~V~a---~~T~qdkmRkLld~v~--akG~~~k~~F~~iL~e~~~~y 77 (85)
T cd08324 26 KNDYFSTEDAEIVCA---CPTQPDKVRKILDLVQ--SKGEEVSEYFLYLLQQLADAY 77 (85)
T ss_pred ccCCccHHHHHHHHh---CCCCHHHHHHHHHHHH--hcCchHHHHHHHHHHHHHHhh
Confidence 578899888876544 3677899999999844 456666777777777766543
No 136
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=39.80 E-value=57 Score=33.34 Aligned_cols=86 Identities=12% Similarity=-0.030 Sum_probs=55.5
Q ss_pred HHHHHHHHhhCCCHH---HHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhccccc
Q 024668 18 DLVVAKATYEKGTKD---EIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSK 94 (264)
Q Consensus 18 eF~~~ls~~~~g~~~---ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~ 94 (264)
.+...+-.-.+++.+ ..++.+|+-+|....|..+.+++..++..++... + .+.........+.++.+.
T Consensus 729 ~en~il~R~sk~~sQ~v~~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~------e-~ee~~~~e~~~lvn~~n~-- 799 (890)
T KOG0035|consen 729 SENEILERDSKGTSQYVLDELRALENEQDKIDGGAASPEELLRCLMSLGYNT------E-EEEQGIAEWFRLVNKKNP-- 799 (890)
T ss_pred HHHHHHHhcccchhHHHHHHHHHHHhHHHHhhcccCCHHHHHHHHHhcCccc------c-hhHHHHHHHHHHHhccCc--
Confidence 344444444455543 6889999999999999999999999887765420 1 011222233334444432
Q ss_pred CCcCCCCCCCCHHHHHHhhhcC
Q 024668 95 NGERSSNKSMSFEDFRSWCTLI 116 (264)
Q Consensus 95 ~~~~~~dg~is~eeF~~~~~~~ 116 (264)
. ..|.+++.+|.+.+.+-
T Consensus 800 l----~~~qv~~~e~~ddl~R~ 817 (890)
T KOG0035|consen 800 L----IQGQVQLLEFEDDLERE 817 (890)
T ss_pred c----cccceeHHHHHhHhhhh
Confidence 2 45999999999999873
No 137
>PF07879 PHB_acc_N: PHB/PHA accumulation regulator DNA-binding domain; InterPro: IPR012909 This domain is found at the N terminus of the polyhydroxyalkanoate (PHA) synthesis regulators. These regulators have been shown to directly bind DNA and PHA []. The invariant nature of this domain compared to the C-terminal IPR007897 from INTERPRO domain(s) suggests that it contains the DNA-binding function.
Probab=37.70 E-value=25 Score=23.60 Aligned_cols=49 Identities=12% Similarity=0.183 Sum_probs=30.3
Q ss_pred hhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhc
Q 024668 40 QLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAA 90 (264)
Q Consensus 40 ~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 90 (264)
++||...+.+||.+++.+++..-... .......++..+....-+++.+.
T Consensus 10 RLYDT~~s~YiTL~di~~lV~~g~~~--~V~D~ktgeDiT~~iL~QIi~e~ 58 (64)
T PF07879_consen 10 RLYDTETSSYITLEDIAQLVREGEDF--KVVDAKTGEDITRSILLQIILEE 58 (64)
T ss_pred ccccCCCceeEeHHHHHHHHHCCCeE--EEEECCCCcccHHHHHHHHHHHH
Confidence 57899999999999999988643221 11112234445555555555443
No 138
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=37.25 E-value=1.4e+02 Score=30.77 Aligned_cols=94 Identities=11% Similarity=0.067 Sum_probs=65.8
Q ss_pred eeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccc-cCCCchHHHHHHHHHhccc
Q 024668 14 LTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISE-RGSNSHQDIVDVFLNAATF 92 (264)
Q Consensus 14 I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~-~~~~~~~~~v~~l~~~~d~ 92 (264)
.+++.|...+..+|..+ .+..+|.-+..+..-++|.++|..+|+.--.. -+-++ .-.....+.|..++.+...
T Consensus 205 f~~e~f~~~l~klcpR~---eie~iF~ki~~~~kpylT~~ql~dfln~~QrD---pRLNeilfp~~~~~r~~~liekyEp 278 (1189)
T KOG1265|consen 205 FTLEKFYRLLNKLCPRP---EIEEIFRKISGKKKPYLTKEQLVDFLNKKQRD---PRLNEILFPPADPRRIQSLIEKYEP 278 (1189)
T ss_pred ccHHHHHHHHHhcCCch---hHHHHHHHhccCCCccccHHHHHHHHhhhccC---cchhhhhcCCCCHHHHHHHHHHcCC
Confidence 56777777777777444 57889999998888999999999988643210 00000 1123456788899998865
Q ss_pred ccCCcCCCCCCCCHHHHHHhhhc
Q 024668 93 SKNGERSSNKSMSFEDFRSWCTL 115 (264)
Q Consensus 93 d~~~~~~~dg~is~eeF~~~~~~ 115 (264)
+ .+...+|.++-+-|.+++..
T Consensus 279 ~--~~~a~~gqms~dgf~ryl~g 299 (1189)
T KOG1265|consen 279 N--SDNAEKGQMSTDGFVRYLMG 299 (1189)
T ss_pred c--hhhhhccccchhhhHHHhhC
Confidence 4 23336899999999998887
No 139
>smart00549 TAFH TAF homology. Domain in Drosophila nervy, CBFA2T1, human TAF105, human TAF130, and Drosophila TAF110. Also known as nervy homology region 1 (NHR1).
Probab=36.67 E-value=1.2e+02 Score=21.97 Aligned_cols=48 Identities=10% Similarity=0.189 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhc
Q 024668 54 DLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 115 (264)
Q Consensus 54 El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~ 115 (264)
-+++++..+.... ++...+.+.+.|..++..+ -+|.|+.|||..-++.
T Consensus 4 K~k~FL~tLi~ls-----~~~~qpe~~~~Vr~LV~~L---------~~~~i~~EeF~~~Lq~ 51 (92)
T smart00549 4 KCKRFLTTLIQLS-----NDISQPEVAERVRTLVLGL---------VNGTITAEEFTSRLQE 51 (92)
T ss_pred HHHHHHHHHHHHh-----cCCCcchHHHHHHHHHHHH---------HhCCCCHHHHHHHHHH
Confidence 3556666665421 1222145667788877777 4799999999887775
No 140
>KOG2871 consensus Uncharacterized conserved protein [Function unknown]
Probab=34.81 E-value=19 Score=32.84 Aligned_cols=33 Identities=21% Similarity=0.272 Sum_probs=28.4
Q ss_pred CHHHHHHHhhhhcccCCCCccCHHHHHHHHHHH
Q 024668 30 TKDEIEEFIYQLLDVNDDGVLGRSDLESVVIAM 62 (264)
Q Consensus 30 ~~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~ 62 (264)
+.++.++-+|+.+|..++|+|+..-++.++...
T Consensus 306 ~~s~q~rR~f~a~d~~d~nfis~s~~~~vm~~~ 338 (449)
T KOG2871|consen 306 NPSEQLRRNFHAYDPEDNNFISCSGLQIVMTAL 338 (449)
T ss_pred CCCHHHHhhhhccCccCCCeeecHHHHHHHHHh
Confidence 346899999999999999999999888877654
No 141
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=34.27 E-value=32 Score=26.47 Aligned_cols=50 Identities=16% Similarity=0.240 Sum_probs=34.6
Q ss_pred CcceeHHHHHHHHHHhh------CCC-H-----------HHHHHHhhhhcccCCCCccCHHHHHHHHH
Q 024668 11 DHKLTFEDLVVAKATYE------KGT-K-----------DEIEEFIYQLLDVNDDGVLGRSDLESVVI 60 (264)
Q Consensus 11 ~g~I~f~eF~~~ls~~~------~g~-~-----------~ekl~~~F~~~D~d~~G~It~~El~~~l~ 60 (264)
+..|+-.|....++.+. .++ . +--+.++..+||.+++|.|+.-+++..+.
T Consensus 57 d~~l~v~~l~~~L~~iy~~l~~~~p~~~~i~~~~v~~a~~L~ln~Ll~vyD~~rtG~I~vls~KvaL~ 124 (127)
T PF09068_consen 57 DSSLSVSQLETLLSSIYEFLNKRLPTLHQIPSRPVDLAVDLLLNWLLNVYDSQRTGKIRVLSFKVALI 124 (127)
T ss_dssp TSEEEHHHHHHHHHHHHHHHHHHSTTS--HH-----HHHHHHHHHHHHHH-TT--SEEEHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCchhHHHHHHHHHHHHHHHhCCCCCCeeehhHHHHHHH
Confidence 45689999988887654 111 1 23567889999999999999999987664
No 142
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=33.93 E-value=1.2e+02 Score=31.16 Aligned_cols=101 Identities=9% Similarity=-0.009 Sum_probs=63.6
Q ss_pred CcccccccCCCcceeHHHHHHHHHHhhCC--CHHHHHHHhhhhcc---cCCCCccCHHHHHHHHHHHHHHHhcccccccC
Q 024668 1 MFNLVTQKRNDHKLTFEDLVVAKATYEKG--TKDEIEEFIYQLLD---VNDDGVLGRSDLESVVIAMLEIIFSMEISERG 75 (264)
Q Consensus 1 lf~~~D~~d~~g~I~f~eF~~~ls~~~~g--~~~ekl~~~F~~~D---~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~ 75 (264)
+|+.+|+ ...|..+.++|+..+-.+... ..++-+...|.+.. .++-|.++..++.+.|..-...
T Consensus 752 le~~~~~-~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~~e~---------- 820 (890)
T KOG0035|consen 752 LENEQDK-IDGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLEREYED---------- 820 (890)
T ss_pred HHhHHHH-hhcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhhhhh----------
Confidence 3677885 778889999999998877633 33567777787774 4445889999998887654331
Q ss_pred CCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhcCchhhhh
Q 024668 76 SNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTLIPSARKF 122 (264)
Q Consensus 76 ~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~~p~~~~~ 122 (264)
......+-.-|.-+..+ .-.+..+|.+. .+.+.+..+
T Consensus 821 -l~~~~r~i~s~~d~~kt-------k~~lL~eEL~~--~~d~lv~d~ 857 (890)
T KOG0035|consen 821 -LDTELRAILAFEDWAKT-------KAYLLLEELVR--ERDELVRDL 857 (890)
T ss_pred -hcHHHHHHHHHHHHHcc-------hhHHHHHHHHh--hccHhhHHH
Confidence 12222232334545332 22577888777 455555543
No 143
>cd02977 ArsC_family Arsenate Reductase (ArsC) family; composed of TRX-fold arsenic reductases and similar proteins including the transcriptional regulator, Spx. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX), through a single catalytic cysteine. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases. Spx is a general regulator that exerts negative and positive control over transcription initiation by binding to the C-terminal domain of the alpha subunit of RNA polymerase.
Probab=33.38 E-value=62 Score=23.46 Aligned_cols=64 Identities=13% Similarity=0.149 Sum_probs=38.4
Q ss_pred hhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHH---HHHHhcccccCCcCCCCCCCCHHHHHHhhh
Q 024668 38 IYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVD---VFLNAATFSKNGERSSNKSMSFEDFRSWCT 114 (264)
Q Consensus 38 ~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~---~l~~~~d~d~~~~~~~dg~is~eeF~~~~~ 114 (264)
-|...|... ...+.+|+.+++..+.. ..++.++ ..+.++..+ ....++.+|+.+++.
T Consensus 25 ~~~~idi~~-~~~~~~~l~~~~~~~~~-------------~~~~li~~~~~~~~~l~~~------~~~~ls~~e~~~~l~ 84 (105)
T cd02977 25 EYEFIDYLK-EPPTKEELKELLAKLGL-------------GVEDLFNTRGTPYRKLGLA------DKDELSDEEALELMA 84 (105)
T ss_pred CcEEEeecc-CCCCHHHHHHHHHhcCC-------------CHHHHHhcCCchHHHcCCc------cccCCCHHHHHHHHH
Confidence 355666653 45789999887765421 1222222 223333211 135789999999999
Q ss_pred cCchhhh
Q 024668 115 LIPSARK 121 (264)
Q Consensus 115 ~~p~~~~ 121 (264)
.+|.+.+
T Consensus 85 ~~p~Lik 91 (105)
T cd02977 85 EHPKLIK 91 (105)
T ss_pred hCcCeee
Confidence 9998753
No 144
>PLN02228 Phosphoinositide phospholipase C
Probab=32.15 E-value=1.7e+02 Score=28.61 Aligned_cols=71 Identities=8% Similarity=0.080 Sum_probs=48.8
Q ss_pred HHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHH
Q 024668 31 KDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFR 110 (264)
Q Consensus 31 ~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~ 110 (264)
+.+.+..+|..+-. ++.++.++|.++|...-+. .....+.+..++..+... ......|.++.+.|.
T Consensus 22 ~~~ei~~if~~~s~--~~~~t~~~~~~FL~~~Q~~----------~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~gF~ 87 (567)
T PLN02228 22 PPVSIKRLFEAYSR--NGKMSFDELLRFVSEVQGE----------RHAGLDYVQDIFHSVKHH--NVFHHHGLVHLNAFY 87 (567)
T ss_pred CcHHHHHHHHHhcC--CCccCHHHHHHHHHHhcCC----------ccCCHHHHHHHHHHhccc--hhhcccCccCHHHHH
Confidence 45788899988864 3689999999998764321 123355677888877432 111134679999999
Q ss_pred Hhhhc
Q 024668 111 SWCTL 115 (264)
Q Consensus 111 ~~~~~ 115 (264)
.++..
T Consensus 88 ~yl~s 92 (567)
T PLN02228 88 RYLFS 92 (567)
T ss_pred HHhcC
Confidence 99975
No 145
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=31.59 E-value=77 Score=30.26 Aligned_cols=60 Identities=7% Similarity=0.140 Sum_probs=42.6
Q ss_pred HHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhc
Q 024668 36 EFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 115 (264)
Q Consensus 36 ~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~ 115 (264)
..-|+-.-.|-+|.|+..--+.+.... ...-.++..+....|.| .||.+++.||+..+..
T Consensus 234 vnQFrtvQpDp~gfisGsaAknFFtKS--------------klpi~ELshIWeLsD~d------~DGALtL~EFcAAfHL 293 (737)
T KOG1955|consen 234 VNQFRTVQPDPHGFISGSAAKNFFTKS--------------KLPIEELSHIWELSDVD------RDGALTLSEFCAAFHL 293 (737)
T ss_pred HhhhhcccCCcccccccHHHHhhhhhc--------------cCchHHHHHHHhhcccC------ccccccHHHHHhhHhh
Confidence 344777888889999987766665431 12234566677777665 7899999999988764
No 146
>PF07531 TAFH: NHR1 homology to TAF; InterPro: IPR003894 The TAF homology (TAFH) or Nervy homology region 1 (NHR1) domain is a domain of 95-100 amino acids present in eukaryotic proteins of the MTG/ETO family and whereof the core ~75-80 residues occur in TAF proteins. The transcription initiation TFIID complex is composed of TATA binding protein (TBP) and a number of TBP-associated factors (TAFs). The TAFH/NHR1 domain is named after fruit fly TATA-box-associated factor 110 (TAF110), human TAF105 and TAF130, and the fruit fly protein Nervy, which is a homologue of human MTG8/ETO [, ]. The human eight twenty-one (ETO or MTG8) and related myeloid transforming gene products MTGR1 and MTG16 as well as the Nervy protein contain the NHR1-4 domains. The NHR1/TAFH domain occurs in the N-terminal part of these proteins, while a MYND-type zinc finger forms the NHR4 domain []. The TAFH/NHR1 domain can be involved in protein-protein interactions, e.g in MTG8/ETO with HSP90 and Gfi-1 []. ; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent; PDB: 2P6V_A 2KNH_A 2PP4_A 2H7B_A.
Probab=31.50 E-value=1.7e+02 Score=21.42 Aligned_cols=60 Identities=15% Similarity=0.183 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhc------Cchhhhhhhccc
Q 024668 54 DLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL------IPSARKFLGGLL 127 (264)
Q Consensus 54 El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~------~p~~~~~l~~ll 127 (264)
-++.++..+... . . +...+.+.+.|..++..+ -+|+|+.|||..-++. .|.+.-||..-+
T Consensus 5 Kck~FL~tLi~l-a---s-~~~spev~~~Vr~LV~~L---------~~~~i~~EeF~~~Lq~~lns~pqP~lvPFLK~~l 70 (96)
T PF07531_consen 5 KCKNFLNTLIQL-A---S-DKQSPEVGENVRELVQNL---------VDGKIEAEEFTSKLQEELNSSPQPYLVPFLKKSL 70 (96)
T ss_dssp HHHHHHHHHHHH-H---C-CSC-CCHHHHHHHHHHHH---------HTTSS-HHHHHHHHHHHCTSS--TTHHHHHHHHH
T ss_pred HHHHHHHHHHHH-h---c-CCCChHHHHHHHHHHHHH---------HcCCCCHHHHHHHHHHHhcCCCCcchHHHHHHhH
Confidence 345566655542 1 1 223356677788877777 4799999999888775 245555554443
No 147
>PRK13344 spxA transcriptional regulator Spx; Reviewed
Probab=31.28 E-value=75 Score=24.46 Aligned_cols=64 Identities=13% Similarity=0.192 Sum_probs=39.8
Q ss_pred HhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHH---HHHHHhcccccCCcCCCCCCCCHHHHHHhh
Q 024668 37 FIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIV---DVFLNAATFSKNGERSSNKSMSFEDFRSWC 113 (264)
Q Consensus 37 ~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v---~~l~~~~d~d~~~~~~~dg~is~eeF~~~~ 113 (264)
..|...|...++ ++.+||..++..+... .+..+ ...++.+.. ....+|-+|..+++
T Consensus 25 i~~~~~d~~~~~-~s~~eL~~~l~~~~~~-------------~~~lin~~~~~~k~L~~-------~~~~ls~~e~i~ll 83 (132)
T PRK13344 25 LSYKEQNLGKEP-LTKEEILAILTKTENG-------------IESIVSSKNRYAKALDC-------DIEELSVNEVIDLI 83 (132)
T ss_pred CCeEEEECCCCC-CCHHHHHHHHHHhCCC-------------HHHhhccCcHHHHhCCc-------chhcCCHHHHHHHH
Confidence 346666765555 7999999998765311 11111 122334422 23568889999999
Q ss_pred hcCchhhh
Q 024668 114 TLIPSARK 121 (264)
Q Consensus 114 ~~~p~~~~ 121 (264)
..+|.+.+
T Consensus 84 ~~~P~Lik 91 (132)
T PRK13344 84 QENPRILK 91 (132)
T ss_pred HhCcccee
Confidence 99998754
No 148
>cd08327 CARD_RAIDD Caspase activation and recruitment domain of RIP-associated ICH-1 homologous protein with a death domain. Caspase activation and recruitment domain (CARD) of RAIDD (RIP-associated ICH-1 homologous protein with a death domain), also known as CRADD (Caspase and RIP adaptor). RAIDD is an adaptor protein that together with the p53-inducible protein PIDD and caspase-2, forms the PIDDosome complex, which is required for caspase-2 activation and plays a role in mediating stress-induced apoptosis. RAIDD contains an N-terminal CARD, which interacts with the caspase-2 CARD, and a C-terminal Death domain (DD), which interacts with the DD of PIDD. In general, CARDs are DDs associated with caspases. They are known to be important in the signaling pathways for apoptosis, inflammation and host-defense mechanisms. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodime
Probab=31.02 E-value=99 Score=22.44 Aligned_cols=55 Identities=20% Similarity=0.271 Sum_probs=40.3
Q ss_pred CCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhcCchhhhhh
Q 024668 46 DDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTLIPSARKFL 123 (264)
Q Consensus 46 ~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~~p~~~~~l 123 (264)
++|.||.++...+-. .+...+.+..++.-+. .-|.-.|..|++.+...|++.+-|
T Consensus 32 ~~gIlT~~~~e~I~a---------------~~T~~~k~~~LLdiLp--------~RG~~AF~~F~~aL~e~~~l~~~l 86 (94)
T cd08327 32 QEGILTESHVEEIES---------------QTTSRRKTMKLLDILP--------SRGPKAFHAFLDSLEEFPWVRDKL 86 (94)
T ss_pred hCCCCCHHHHHHHHc---------------cCChHHHHHHHHHHHH--------hhChhHHHHHHHHHHHHHHHHHHH
Confidence 468888887755421 1344677888887773 358889999999999999887654
No 149
>KOG3449 consensus 60S acidic ribosomal protein P2 [Translation, ribosomal structure and biogenesis]
Probab=28.42 E-value=2e+02 Score=21.54 Aligned_cols=44 Identities=11% Similarity=0.176 Sum_probs=34.0
Q ss_pred HHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhc
Q 024668 35 EEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAA 90 (264)
Q Consensus 35 l~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 90 (264)
...+|-+.+.-|+...+..++++++.++.- ..-.+.++.+++++
T Consensus 3 yvaAYLL~~lgGn~~psa~DikkIl~sVG~------------E~d~e~i~~visel 46 (112)
T KOG3449|consen 3 YVAAYLLAVLGGNASPSASDIKKILESVGA------------EIDDERINLVLSEL 46 (112)
T ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHhCc------------ccCHHHHHHHHHHh
Confidence 445677778888888999999999887653 34467888888887
No 150
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=26.86 E-value=49 Score=31.51 Aligned_cols=32 Identities=28% Similarity=0.349 Sum_probs=27.5
Q ss_pred HHHHHHhhhhcccCCCCccCHHHHHHHHHHHH
Q 024668 32 DEIEEFIYQLLDVNDDGVLGRSDLESVVIAML 63 (264)
Q Consensus 32 ~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~ 63 (264)
-+.+..++.+.|.|.||-+|..||...+..++
T Consensus 264 i~ELshIWeLsD~d~DGALtL~EFcAAfHLVV 295 (737)
T KOG1955|consen 264 IEELSHIWELSDVDRDGALTLSEFCAAFHLVV 295 (737)
T ss_pred hHHHHHHHhhcccCccccccHHHHHhhHhhee
Confidence 47789999999999999999999988775543
No 151
>cd06404 PB1_aPKC PB1 domain is an essential modular domain of the atypical protein kinase C (aPKC) which in complex with Par6 and Par3 proteins is crucial for establishment of apical-basal polarity of animal cells. PB1 domain is a modular domain mediating specific protein-protein interaction which play roles in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi,
Probab=25.95 E-value=1.1e+02 Score=21.82 Aligned_cols=20 Identities=15% Similarity=0.165 Sum_probs=15.9
Q ss_pred CcceeHHHHHHHHHHhhCCC
Q 024668 11 DHKLTFEDLVVAKATYEKGT 30 (264)
Q Consensus 11 ~g~I~f~eF~~~ls~~~~g~ 30 (264)
+..++|++++.-+..+|+..
T Consensus 17 d~~~s~e~L~~~v~~~c~~~ 36 (83)
T cd06404 17 DPSISLEELCNEVRDMCRFH 36 (83)
T ss_pred CCCcCHHHHHHHHHHHhCCC
Confidence 44789999999998888543
No 152
>cd03034 ArsC_ArsC Arsenate Reductase (ArsC) family, ArsC subfamily; arsenic reductases similar to that encoded by arsC on the R733 plasmid of Escherichia coli. E. coli ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], the first step in the detoxification of arsenic, using reducing equivalents derived from glutathione (GSH) via glutaredoxin (GRX). ArsC contains a single catalytic cysteine, within a thioredoxin fold, that forms a covalent thiolate-As(V) intermediate, which is reduced by GRX through a mixed GSH-arsenate intermediate. This family of predominantly bacterial enzymes is unrelated to two other families of arsenate reductases which show similarity to low-molecular-weight acid phosphatases and phosphotyrosyl phosphatases.
Probab=25.77 E-value=1.2e+02 Score=22.45 Aligned_cols=62 Identities=10% Similarity=0.089 Sum_probs=37.1
Q ss_pred hhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHH---HHHhcccccCCcCCCCCCCCHHHHHHhhhc
Q 024668 39 YQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDV---FLNAATFSKNGERSSNKSMSFEDFRSWCTL 115 (264)
Q Consensus 39 F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~---l~~~~d~d~~~~~~~dg~is~eeF~~~~~~ 115 (264)
|...|.-. -.+|.+|+..++..+.. ..++.++. ..+++.. .+..++-+|..+++..
T Consensus 26 ~~~~di~~-~~~t~~el~~~l~~~~~-------------~~~~lin~~~~~y~~l~~-------~~~~ls~~e~i~ll~~ 84 (112)
T cd03034 26 PEIVEYLK-TPPTAAELRELLAKLGI-------------SPRDLLRTKEAPYKELGL-------ADPELSDEELIDAMAA 84 (112)
T ss_pred eEEEeccc-CCcCHHHHHHHHHHcCC-------------CHHHHHhcCCchHHHcCC-------CccCCCHHHHHHHHHh
Confidence 44445433 44799999998876531 11222221 1233322 2356899999999999
Q ss_pred Cchhhh
Q 024668 116 IPSARK 121 (264)
Q Consensus 116 ~p~~~~ 121 (264)
+|.+.+
T Consensus 85 ~P~Lik 90 (112)
T cd03034 85 HPILIE 90 (112)
T ss_pred CcCccc
Confidence 998764
No 153
>PF09373 PMBR: Pseudomurein-binding repeat; InterPro: IPR018975 Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) is a methanogenic Gram-positive microorganism with a cell wall consisting of pseudomurein. This repeat specifically binds to pseudomurein. This repeat is found at the N terminus of PeiW and PeiP which are pseudomurein binding phage proteins.
Probab=25.64 E-value=73 Score=18.13 Aligned_cols=18 Identities=6% Similarity=0.231 Sum_probs=10.5
Q ss_pred CCccCHHHHHHHHHHHHH
Q 024668 47 DGVLGRSDLESVVIAMLE 64 (264)
Q Consensus 47 ~G~It~~El~~~l~~~~~ 64 (264)
.|.|+++|+..+...+..
T Consensus 2 ~~~i~~~~~~d~a~rv~~ 19 (33)
T PF09373_consen 2 SGTISKEEYLDMASRVNN 19 (33)
T ss_pred CceecHHHHHHHHHHHHH
Confidence 456666666666655544
No 154
>PLN02222 phosphoinositide phospholipase C 2
Probab=25.61 E-value=2.3e+02 Score=27.82 Aligned_cols=67 Identities=12% Similarity=0.190 Sum_probs=46.8
Q ss_pred HHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHH
Q 024668 32 DEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRS 111 (264)
Q Consensus 32 ~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~ 111 (264)
-+.+..+|..|.. ++.++.++|..+|...-+. .....+.+..++++...- . +.+.++++.|..
T Consensus 24 ~~ei~~if~~~~~--~~~mt~~~l~~FL~~~Q~~----------~~~~~~~~~~ii~~~~~~-~----~~~~~~~~gF~~ 86 (581)
T PLN02222 24 PREIKTIFEKYSE--NGVMTVDHLHRFLIDVQKQ----------DKATREDAQSIINSASSL-L----HRNGLHLDAFFK 86 (581)
T ss_pred cHHHHHHHHHhcC--CCCcCHHHHHHHHHHhcCC----------ccCCHHHHHHHHHhhhhh-h----hccCcCHHHHHH
Confidence 3578888988863 4799999999998765321 123455667777764210 1 456799999999
Q ss_pred hhhc
Q 024668 112 WCTL 115 (264)
Q Consensus 112 ~~~~ 115 (264)
++..
T Consensus 87 yL~s 90 (581)
T PLN02222 87 YLFG 90 (581)
T ss_pred HhcC
Confidence 9986
No 155
>PF14974 DUF4511: Domain of unknown function (DUF4511)
Probab=24.84 E-value=3e+02 Score=20.51 Aligned_cols=67 Identities=10% Similarity=0.076 Sum_probs=44.4
Q ss_pred HHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHH
Q 024668 31 KDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFR 110 (264)
Q Consensus 31 ~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~ 110 (264)
...|+..+..... .++.+++..++.. .-++--.++++..+..+ +.|.+.|..-.
T Consensus 23 N~~kl~eAk~~ag---------ndm~k~mq~v~Pv-------------a~qiq~~VIk~yGF~~~----~eG~~~f~~~i 76 (105)
T PF14974_consen 23 NAAKLEEAKANAG---------NDMLKMMQFVFPV-------------ATQIQMEVIKKYGFPES----REGVMQFAQLI 76 (105)
T ss_pred HHHHHHHHHHhcc---------chHHHHHHHHHHH-------------HHHHHHHHHHHcCCCCC----cchHHHHHHHH
Confidence 3466766665432 5577777766653 23344566888877655 78999998888
Q ss_pred Hhhhc-Cchhhhhh
Q 024668 111 SWCTL-IPSARKFL 123 (264)
Q Consensus 111 ~~~~~-~p~~~~~l 123 (264)
+-+.+ +|.+.+..
T Consensus 77 ~~~e~~D~eva~l~ 90 (105)
T PF14974_consen 77 RELEKDDPEVARLH 90 (105)
T ss_pred HHHHccCHHHHHHH
Confidence 88854 88877653
No 156
>KOG0103 consensus Molecular chaperones HSP105/HSP110/SSE1, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=24.70 E-value=57 Score=32.33 Aligned_cols=67 Identities=13% Similarity=0.176 Sum_probs=47.9
Q ss_pred cccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhcCchhhh
Q 024668 42 LDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTLIPSARK 121 (264)
Q Consensus 42 ~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~~p~~~~ 121 (264)
.|+|-.|.|+++||+++...++.. +..-+...++.+.. ..+-|..-|+..-..+.|.+.+
T Consensus 292 ~d~dvs~~i~ReEfEel~~plL~r-------------v~~p~~~~l~d~~l-------~~edi~~VEiVGg~sripaike 351 (727)
T KOG0103|consen 292 NDKDVSSKIKREEFEELSAPLLER-------------VEVPLLKALADAKL-------KVEDIHAVEIVGGLSRIPAIKE 351 (727)
T ss_pred ecchhhhhccHHHHHHHHHHHHHh-------------hhHHHHHHHHHhcC-------ccccceeEEEecCcccchHHHH
Confidence 388889999999999998887762 12223333444322 2455777788888888999999
Q ss_pred hhhcccC
Q 024668 122 FLGGLLT 128 (264)
Q Consensus 122 ~l~~ll~ 128 (264)
.++.+|-
T Consensus 352 ~Is~~Fg 358 (727)
T KOG0103|consen 352 MISDFFG 358 (727)
T ss_pred HHHHHhC
Confidence 8888776
No 157
>PLN02952 phosphoinositide phospholipase C
Probab=23.88 E-value=1.8e+02 Score=28.61 Aligned_cols=53 Identities=13% Similarity=0.107 Sum_probs=35.3
Q ss_pred CCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhc
Q 024668 46 DDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTL 115 (264)
Q Consensus 46 ~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~ 115 (264)
+.|.++.+|++.+++.+-.. .......+..+|.+... +++.++.++|.+++..
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~----------~~~~r~ei~~lf~~~~~-------~~~~mt~~~l~~FL~~ 65 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKIT----------EAEPPDDVKDVFCKFSV-------GGGHMGADQLRRFLVL 65 (599)
T ss_pred cCCCcCHHHHHHHHHHhccc----------cCCChHHHHHHHHHHhC-------CCCccCHHHHHHHHHH
Confidence 46899999998776644210 12245677888887743 3467888888887765
No 158
>cd03032 ArsC_Spx Arsenate Reductase (ArsC) family, Spx subfamily; Spx is a unique RNA polymerase (RNAP)-binding protein present in bacilli and some mollicutes. It inhibits transcription by binding to the C-terminal domain of the alpha subunit of RNAP, disrupting complex formation between RNAP and certain transcriptional activator proteins like ResD and ComA. In response to oxidative stress, Spx can also activate transcription, making it a general regulator that exerts both positive and negative control over transcription initiation. Spx has been shown to exert redox-sensitive transcriptional control over genes like trxA (TRX) and trxB (TRX reductase), genes that function in thiol homeostasis. This redox-sensitive activity is dependent on the presence of a CXXC motif, present in some members of the Spx subfamily, that acts as a thiol/disulfide switch. Spx has also been shown to repress genes in a sulfate-dependent manner independent of the presence of the CXXC motif.
Probab=23.84 E-value=86 Score=23.28 Aligned_cols=63 Identities=11% Similarity=0.155 Sum_probs=37.7
Q ss_pred hhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHH---HHHHhcccccCCcCCCCCCCCHHHHHHhhh
Q 024668 38 IYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVD---VFLNAATFSKNGERSSNKSMSFEDFRSWCT 114 (264)
Q Consensus 38 ~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~---~l~~~~d~d~~~~~~~dg~is~eeF~~~~~ 114 (264)
-|...|... ...+.+||.+++..+... .+..++ ..++++.. .+..+|-+|..+++.
T Consensus 26 ~~~~idi~~-~~~~~~el~~~~~~~~~~-------------~~~l~n~~~~~~k~l~~-------~~~~ls~~e~i~~l~ 84 (115)
T cd03032 26 PFEERNLFK-QPLTKEELKEILSLTENG-------------VEDIISTRSKAFKNLNI-------DIDELSLSELIRLIS 84 (115)
T ss_pred ceEEEecCC-CcchHHHHHHHHHHhcCC-------------HHHHHhcCcHHHHHcCC-------CcccCCHHHHHHHHH
Confidence 355556644 447999999988765211 111111 22333322 234688899999999
Q ss_pred cCchhhh
Q 024668 115 LIPSARK 121 (264)
Q Consensus 115 ~~p~~~~ 121 (264)
.+|.+.+
T Consensus 85 ~~p~Lik 91 (115)
T cd03032 85 EHPSLLR 91 (115)
T ss_pred hChhhee
Confidence 9998754
No 159
>COG5562 Phage envelope protein [General function prediction only]
Probab=23.60 E-value=38 Score=26.33 Aligned_cols=18 Identities=28% Similarity=0.331 Sum_probs=14.7
Q ss_pred CCCcceeHHHHHHHHHHh
Q 024668 9 RNDHKLTFEDLVVAKATY 26 (264)
Q Consensus 9 d~~g~I~f~eF~~~ls~~ 26 (264)
+..|..+|+||+..++..
T Consensus 84 ~qsGqttF~ef~~~la~A 101 (137)
T COG5562 84 HQSGQTTFEEFCSALAEA 101 (137)
T ss_pred HhcCCccHHHHHHHHHhC
Confidence 678899999999888763
No 160
>PF09851 SHOCT: Short C-terminal domain; InterPro: IPR018649 This family of hypothetical prokaryotic proteins has no known function.
Probab=23.43 E-value=1.4e+02 Score=16.69 Aligned_cols=26 Identities=19% Similarity=0.254 Sum_probs=16.1
Q ss_pred HHHHhhhhcccCCCCccCHHHHHHHHHHH
Q 024668 34 IEEFIYQLLDVNDDGVLGRSDLESVVIAM 62 (264)
Q Consensus 34 kl~~~F~~~D~d~~G~It~~El~~~l~~~ 62 (264)
+++.+=.+++ +|.||.+|+.+.-..+
T Consensus 4 ~L~~L~~l~~---~G~IseeEy~~~k~~l 29 (31)
T PF09851_consen 4 RLEKLKELYD---KGEISEEEYEQKKARL 29 (31)
T ss_pred HHHHHHHHHH---cCCCCHHHHHHHHHHH
Confidence 4444444554 4888888887755443
No 161
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=23.34 E-value=61 Score=23.84 Aligned_cols=64 Identities=17% Similarity=0.149 Sum_probs=37.2
Q ss_pred hhhhcccCCCCccCHHHHHHHHHHHH-HHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHhhhcC
Q 024668 38 IYQLLDVNDDGVLGRSDLESVVIAML-EIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSWCTLI 116 (264)
Q Consensus 38 ~F~~~D~d~~G~It~~El~~~l~~~~-~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~~~ 116 (264)
-|...|...++ +|.+||..++.... ..+.. .-...++++..+ ....+|-+|..+++..+
T Consensus 25 ~~~~~di~~~p-~s~~eL~~~l~~~g~~~li~-------------~~~~~yk~l~l~------~~~~~s~~e~~~~l~~~ 84 (105)
T cd03035 25 AYTFHDYRKDG-LDAATLERWLAKVGWETLLN-------------KRGTTWRKLDDA------QKAALDAAKAIALMLEH 84 (105)
T ss_pred CeEEEecccCC-CCHHHHHHHHHHhChHHHHc-------------cCchHHHhCChh------hhccCCHHHHHHHHHhC
Confidence 35555665444 79999999887542 11000 001223333221 12458889999999999
Q ss_pred chhhh
Q 024668 117 PSARK 121 (264)
Q Consensus 117 p~~~~ 121 (264)
|.+.+
T Consensus 85 p~Lik 89 (105)
T cd03035 85 PSLIK 89 (105)
T ss_pred cCeee
Confidence 98653
No 162
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=23.33 E-value=1.2e+02 Score=22.25 Aligned_cols=62 Identities=16% Similarity=0.295 Sum_probs=40.0
Q ss_pred HHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccCCcCCCCCCCCHHHHHHh
Q 024668 33 EIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKNGERSSNKSMSFEDFRSW 112 (264)
Q Consensus 33 ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~~~~~~dg~is~eeF~~~ 112 (264)
..++.=|+.+-. ||.+.+.+|-+++- + ..+++.+.++|..+..-+++ ..+.||.+|...+
T Consensus 30 ~~VE~RFd~La~--dG~L~rs~Fg~CIG----M-----------~dSkeFA~eLFdALaRrr~i---~~~~I~k~eL~ef 89 (100)
T PF08414_consen 30 KEVEKRFDKLAK--DGLLPRSDFGECIG----M-----------KDSKEFAGELFDALARRRGI---KGDSITKDELKEF 89 (100)
T ss_dssp HHHHHHHHHH-B--TTBEEGGGHHHHHT-----------------S-HHHHHHHHHHHHHHTT-----SSEE-HHHHHHH
T ss_pred HHHHHHHHHhCc--CCcccHHHHHHhcC----C-----------cccHHHHHHHHHHHHHhcCC---ccCCcCHHHHHHH
Confidence 566777888776 89999999988653 2 23567777887777543221 3578999988765
Q ss_pred hh
Q 024668 113 CT 114 (264)
Q Consensus 113 ~~ 114 (264)
..
T Consensus 90 W~ 91 (100)
T PF08414_consen 90 WE 91 (100)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 163
>PF12631 GTPase_Cys_C: Catalytic cysteine-containing C-terminus of GTPase, MnmE; PDB: 1XZQ_A 1XZP_A 2GJ8_D 3GEH_A 3GEI_B 3GEE_A.
Probab=23.08 E-value=1.1e+02 Score=20.81 Aligned_cols=50 Identities=24% Similarity=0.168 Sum_probs=28.2
Q ss_pred HHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhc
Q 024668 33 EIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAA 90 (264)
Q Consensus 33 ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 90 (264)
+.+..+...++....-.+-..+|+.++..+.... |....+++++.+|+.+
T Consensus 23 ~~l~~a~~~l~~~~~~dl~a~~L~~A~~~L~~It--------G~~~~ediLd~IFs~F 72 (73)
T PF12631_consen 23 EHLEDALEALENGLPLDLVAEDLREALESLGEIT--------GEVVTEDILDNIFSNF 72 (73)
T ss_dssp HHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHC--------TSS--HHHHHHHHCTS
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHh--------CCCChHHHHHHHHHhh
Confidence 4455555555544444566677777776666542 2345678888888765
No 164
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=21.71 E-value=43 Score=27.99 Aligned_cols=56 Identities=14% Similarity=0.239 Sum_probs=38.4
Q ss_pred cccccccCCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHHHH
Q 024668 2 FNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLESVV 59 (264)
Q Consensus 2 f~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~~l 59 (264)
|-.+|+.--||.++-.|.+-.-+.+. ..+.-..-.|.-.|.|+||+|+.+|+...+
T Consensus 193 f~qld~~p~d~~~sh~el~pl~ap~i--pme~c~~~f~e~cd~~nd~~ial~ew~~c~ 248 (259)
T KOG4004|consen 193 FGQLDQHPIDGYLSHTELAPLRAPLI--PMEHCTTRFFETCDLDNDKYIALDEWAGCF 248 (259)
T ss_pred eccccCCCccccccccccccccCCcc--cHHhhchhhhhcccCCCCCceeHHHhhccc
Confidence 34556434678888777665433321 245566778999999999999999986643
No 165
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=20.53 E-value=1.6e+02 Score=32.25 Aligned_cols=54 Identities=9% Similarity=0.167 Sum_probs=42.8
Q ss_pred cccccccCCCcceeHHHHHHHHHHhhCCCHHHHHHHhhhhcccCCCCccCHHHHHH
Q 024668 2 FNLVTQKRNDHKLTFEDLVVAKATYEKGTKDEIEEFIYQLLDVNDDGVLGRSDLES 57 (264)
Q Consensus 2 f~~~D~~d~~g~I~f~eF~~~ls~~~~g~~~ekl~~~F~~~D~d~~G~It~~El~~ 57 (264)
|+.+|. ||.|.|+-.+|-.+|..--. -....+.++..+-..|.+..+..+|+.+
T Consensus 4063 fkeydp-dgkgiiskkdf~kame~~k~-ytqse~dfllscae~dend~~~y~dfv~ 4116 (5019)
T KOG2243|consen 4063 FKEYDP-DGKGIISKKDFHKAMEGHKH-YTQSEIDFLLSCAEADENDMFDYEDFVD 4116 (5019)
T ss_pred chhcCC-CCCccccHHHHHHHHhcccc-chhHHHHHHHHhhccCccccccHHHHHH
Confidence 778995 99999999999999865322 2345677888888888888899888865
No 166
>PRK12559 transcriptional regulator Spx; Provisional
Probab=20.37 E-value=89 Score=24.01 Aligned_cols=63 Identities=13% Similarity=0.183 Sum_probs=38.3
Q ss_pred hhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHH---HHHHHhcccccCCcCCCCCCCCHHHHHHhhh
Q 024668 38 IYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIV---DVFLNAATFSKNGERSSNKSMSFEDFRSWCT 114 (264)
Q Consensus 38 ~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v---~~l~~~~d~d~~~~~~~dg~is~eeF~~~~~ 114 (264)
.|...|...++ ++.+||..++...... .++.+ ...++++.. ....+|.+|..+.+.
T Consensus 26 ~~~~~di~~~~-~s~~el~~~l~~~~~g-------------~~~lin~~~~~~k~l~~-------~~~~ls~~e~i~ll~ 84 (131)
T PRK12559 26 DYTEKNIVSNS-MTVDELKSILRLTEEG-------------ATEIISTRSKTFQDLNI-------NIEELSLNEFYKLII 84 (131)
T ss_pred CeEEEEeeCCc-CCHHHHHHHHHHcCCC-------------HHHHHhcCcHHHHhCCC-------CcccCCHHHHHHHHH
Confidence 35555665544 7999999998764210 11111 122444432 234588899999999
Q ss_pred cCchhhh
Q 024668 115 LIPSARK 121 (264)
Q Consensus 115 ~~p~~~~ 121 (264)
.+|.+.+
T Consensus 85 ~~P~Lik 91 (131)
T PRK12559 85 EHPLMLR 91 (131)
T ss_pred hCcceEe
Confidence 9998653
No 167
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=20.24 E-value=94 Score=30.33 Aligned_cols=32 Identities=16% Similarity=0.288 Sum_probs=27.4
Q ss_pred HHHHHHhhhhcccCCCCccCHHHHHHHHHHHH
Q 024668 32 DEIEEFIYQLLDVNDDGVLGRSDLESVVIAML 63 (264)
Q Consensus 32 ~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~ 63 (264)
.+.+..+|..||.|+||.++.+|+..+....-
T Consensus 314 ~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P 345 (625)
T KOG1707|consen 314 YRFLVDVFEKFDRDNDGALSPEELKDLFSTAP 345 (625)
T ss_pred HHHHHHHHHhccCCCCCCcCHHHHHHHhhhCC
Confidence 37888899999999999999999988766543
No 168
>PLN02223 phosphoinositide phospholipase C
Probab=20.19 E-value=3.8e+02 Score=26.04 Aligned_cols=77 Identities=3% Similarity=-0.110 Sum_probs=46.3
Q ss_pred HHHHHHHhhhhcccCCCCccCHHHHHHHHHHHHHHHhcccccccCCCchHHHHHHHHHhcccccC--CcCCCCCCCCHHH
Q 024668 31 KDEIEEFIYQLLDVNDDGVLGRSDLESVVIAMLEIIFSMEISERGSNSHQDIVDVFLNAATFSKN--GERSSNKSMSFED 108 (264)
Q Consensus 31 ~~ekl~~~F~~~D~d~~G~It~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~d~d~~--~~~~~dg~is~ee 108 (264)
+-+.++.+|..|. +++|..+.+.|.+++.-+... +.......+.++.++..+..... ....+.+.++.+.
T Consensus 14 ~p~~v~~~f~~~~-~~~~~m~~~~l~~fl~~l~~~-------q~e~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~l~~~~ 85 (537)
T PLN02223 14 QPDLILNFFGNEF-HGYDDDMPELLPRFIELLDTE-------KDEDGAGLNAAEKIAAELKRRKCDILAFRNLRCLELDH 85 (537)
T ss_pred CcHHHHHHHHHhh-cCCCCCCHHHHHHHHHHHHHh-------cccccCCHHHHHHHHHHHHhhcccchhhhhccccCHHH
Confidence 4578899999995 678999999999988544332 10112223344444443322100 0011246799999
Q ss_pred HHHhhhc
Q 024668 109 FRSWCTL 115 (264)
Q Consensus 109 F~~~~~~ 115 (264)
|..++..
T Consensus 86 f~~~L~s 92 (537)
T PLN02223 86 LNEFLFS 92 (537)
T ss_pred HHHHhcC
Confidence 9999987
Done!