Query 024669
Match_columns 264
No_of_seqs 65 out of 67
Neff 1.9
Searched_HMMs 13730
Date Mon Mar 25 12:21:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024669.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/024669hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1kqfc_ f.21.1.1 (C:) Formate 48.9 6.9 0.0005 29.1 3.5 63 97-163 111-173 (216)
2 d1t1ua2 c.43.1.3 (A:402-616) C 39.6 9.6 0.0007 30.0 3.2 35 126-162 8-42 (215)
3 d1nm8a2 c.43.1.3 (A:386-599) C 33.3 12 0.00089 29.3 2.8 33 126-160 9-41 (214)
4 d1ad1a_ c.1.21.1 (A:) Dihydrop 31.2 9.8 0.00071 30.9 1.9 23 118-140 161-183 (264)
5 d1eyea_ c.1.21.1 (A:) Dihydrop 27.1 13 0.00093 29.9 1.9 23 118-140 168-190 (270)
6 d1ajza_ c.1.21.1 (A:) Dihydrop 23.9 16 0.0011 30.2 1.9 20 118-137 180-199 (282)
7 d1xl7a2 c.43.1.3 (A:393-610) P 18.1 27 0.0019 27.4 2.1 34 126-161 10-43 (218)
8 d1jqga2 d.58.3.1 (A:4P-100P) P 17.8 18 0.0013 24.2 0.9 11 200-210 3-13 (92)
9 d1w0da_ c.77.1.1 (A:) 3-isopro 17.3 37 0.0027 27.9 2.9 29 39-72 99-127 (337)
10 d3c9ua1 d.79.4.1 (A:1-137) Thi 17.2 23 0.0017 25.5 1.4 15 85-99 23-37 (137)
No 1
>d1kqfc_ f.21.1.1 (C:) Formate dehydrogenase N, cytochrome (gamma) subunit {Escherichia coli [TaxId: 562]}
Probab=48.88 E-value=6.9 Score=29.07 Aligned_cols=63 Identities=13% Similarity=0.119 Sum_probs=39.9
Q ss_pred ccceehhhHHHHHHHHHHHhhheeeeeCCCCcchhHHHHhhccCCChHHHHHHHHHHHHHHhccccc
Q 024669 97 NQKLTSWVYFSVILGVVLFLLQLLWIDNSTGYGKAFIDSVSSLSDSHEVVMLVLILIFATVHSGLAS 163 (264)
Q Consensus 97 ~Qk~~sW~yF~~ilgvVL~~l~v~Widp~TG~G~~fi~~vs~ls~Sh~~vmL~Lll~FAi~HSGlAs 163 (264)
-||+.-|+.+.+.+..++..+...+-.+..+......+.+.. =| ..+..+++.|.++|--+|.
T Consensus 111 ~qkl~~~~~~~~~~~~~~TGl~l~~~~~~~~~~~~~~~~~~~---iH-~~~~~l~~~~vi~Hvy~a~ 173 (216)
T d1kqfc_ 111 GQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLL---IH-AAAGIILIHAILIHMYMAF 173 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCTTTTGGGSCHHHHHHHHH---HH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHhHHHHHHH---HH-HHHHHHHHHHHHHHHHHHH
Confidence 377888888877777777776543322234444444444433 37 4555777889999997764
No 2
>d1t1ua2 c.43.1.3 (A:402-616) Choline O-acetyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=39.57 E-value=9.6 Score=30.01 Aligned_cols=35 Identities=26% Similarity=0.440 Sum_probs=29.5
Q ss_pred CCcchhHHHHhhccCCChHHHHHHHHHHHHHHhcccc
Q 024669 126 TGYGKAFIDSVSSLSDSHEVVMLVLILIFATVHSGLA 162 (264)
Q Consensus 126 TG~G~~fi~~vs~ls~Sh~~vmL~Lll~FAi~HSGlA 162 (264)
+||||+|+.. -.++++. ++=++|.|.|=-.|.-.+
T Consensus 8 ~~~Gk~~iK~-~k~sPDa-~iQlAlQLA~~r~~g~~~ 42 (215)
T d1t1ua2 8 DNYGKTFIKK-QKYSPDG-FIQVALQLAYYRLYQRLV 42 (215)
T ss_dssp CSCCHHHHHH-TTCCHHH-HHHHHHHHHHHHHHSSCC
T ss_pred CccCHHHHHh-CCCCchH-HHHHHHHHHHHHHcCCCC
Confidence 7999999999 6788888 888899999888886543
No 3
>d1nm8a2 c.43.1.3 (A:386-599) Carnitine acetyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.31 E-value=12 Score=29.34 Aligned_cols=33 Identities=24% Similarity=0.394 Sum_probs=27.7
Q ss_pred CCcchhHHHHhhccCCChHHHHHHHHHHHHHHhcc
Q 024669 126 TGYGKAFIDSVSSLSDSHEVVMLVLILIFATVHSG 160 (264)
Q Consensus 126 TG~G~~fi~~vs~ls~Sh~~vmL~Lll~FAi~HSG 160 (264)
++|||+|+.. -.++++. ++=++|.|.+=-.|.-
T Consensus 9 ~~fGk~~ik~-~~~sPDa-~iQlalQLA~~r~~g~ 41 (214)
T d1nm8a2 9 HHFGKDFPKS-EKLSPDA-FIQMALQLAYYRIYGQ 41 (214)
T ss_dssp CSCSSHHHHH-TTCCHHH-HHHHHHHHHHHHHHSS
T ss_pred ccccHHHHHh-CCCCchH-HHHHHHHHHHHHHcCC
Confidence 6899999998 7788888 8888999988777743
No 4
>d1ad1a_ c.1.21.1 (A:) Dihydropteroate synthetase {Staphylococcus aureus [TaxId: 1280]}
Probab=31.21 E-value=9.8 Score=30.91 Aligned_cols=23 Identities=17% Similarity=0.553 Sum_probs=18.2
Q ss_pred heeeeeCCCCcchhHHHHhhccC
Q 024669 118 QLLWIDNSTGYGKAFIDSVSSLS 140 (264)
Q Consensus 118 ~v~Widp~TG~G~~fi~~vs~ls 140 (264)
.-+|+||+-||||..-+.++=+.
T Consensus 161 ~~IilDPGiGFgKt~~~n~~ll~ 183 (264)
T d1ad1a_ 161 NKIWLDPGIGFAKTRNEEAEVMA 183 (264)
T ss_dssp GGEEEECCTTSSCCHHHHHHHHH
T ss_pred ceEEeccCcCccccchhHHHHHH
Confidence 45999999999999877665444
No 5
>d1eyea_ c.1.21.1 (A:) Dihydropteroate synthetase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=27.08 E-value=13 Score=29.93 Aligned_cols=23 Identities=22% Similarity=0.267 Sum_probs=17.5
Q ss_pred heeeeeCCCCcchhHHHHhhccC
Q 024669 118 QLLWIDNSTGYGKAFIDSVSSLS 140 (264)
Q Consensus 118 ~v~Widp~TG~G~~fi~~vs~ls 140 (264)
.-+|+||+-||||..-+.++=+.
T Consensus 168 ~~IilDPGiGFgKt~~~n~~lL~ 190 (270)
T d1eyea_ 168 ARLVLDPGLGFAKTAQHNWAILH 190 (270)
T ss_dssp GGEEEECCTTSSCCHHHHHHHHH
T ss_pred eEEEEccccccCcccchHHHHHH
Confidence 34999999999998766654443
No 6
>d1ajza_ c.1.21.1 (A:) Dihydropteroate synthetase {Escherichia coli [TaxId: 562]}
Probab=23.91 E-value=16 Score=30.15 Aligned_cols=20 Identities=30% Similarity=0.526 Sum_probs=16.2
Q ss_pred heeeeeCCCCcchhHHHHhh
Q 024669 118 QLLWIDNSTGYGKAFIDSVS 137 (264)
Q Consensus 118 ~v~Widp~TG~G~~fi~~vs 137 (264)
.=+|+||+-||||..-+.++
T Consensus 180 ~~IilDPGiGFgK~~~~n~~ 199 (282)
T d1ajza_ 180 EKLLLDPGFGFGKNLSHNYS 199 (282)
T ss_dssp GGEEEECCTTSSCCHHHHHH
T ss_pred hhEecCCCcCcCCChhhhHH
Confidence 46899999999998766554
No 7
>d1xl7a2 c.43.1.3 (A:393-610) Peroxisomal carnitine O-octanoyltransferase, COT {Mouse (Mus musculus) [TaxId: 10090]}
Probab=18.07 E-value=27 Score=27.43 Aligned_cols=34 Identities=24% Similarity=0.405 Sum_probs=18.7
Q ss_pred CCcchhHHHHhhccCCChHHHHHHHHHHHHHHhccc
Q 024669 126 TGYGKAFIDSVSSLSDSHEVVMLVLILIFATVHSGL 161 (264)
Q Consensus 126 TG~G~~fi~~vs~ls~Sh~~vmL~Lll~FAi~HSGl 161 (264)
++|||+|+... .++++. +|=++|.|.+=-.|.-.
T Consensus 10 ~~fGk~~ik~~-~~sPDa-~vQlalQLA~~r~~g~~ 43 (218)
T d1xl7a2 10 TSFGKKLTKEE-ALHPDT-FIQLALQLAYYRLHGRP 43 (218)
T ss_dssp C------------CCHHH-HHHHHHHHHHHHHHSSC
T ss_pred ccccHHHHHhC-CCCcHH-HHHHHHHHHHHHHcCCC
Confidence 68999999994 788888 88889999888888544
No 8
>d1jqga2 d.58.3.1 (A:4P-100P) Procarboxypeptidase A {Cotton bollworm (Helicoverpa armigera) [TaxId: 29058]}
Probab=17.85 E-value=18 Score=24.22 Aligned_cols=11 Identities=36% Similarity=0.803 Sum_probs=10.2
Q ss_pred cccceeeceec
Q 024669 200 RYDGMQLWQLQ 210 (264)
Q Consensus 200 RYDGvqLW~lq 210 (264)
||||-++|.+.
T Consensus 3 ~YdgykV~rv~ 13 (92)
T d1jqga2 3 IYDGHAVYQVD 13 (92)
T ss_dssp TTTTCEEEEEE
T ss_pred cccCCEEEEEE
Confidence 89999999996
No 9
>d1w0da_ c.77.1.1 (A:) 3-isopropylmalate dehydrogenase, IPMDH {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=17.33 E-value=37 Score=27.92 Aligned_cols=29 Identities=31% Similarity=0.418 Sum_probs=20.1
Q ss_pred EeeeccCCCCCceeeccCccccceEEEeeecccc
Q 024669 39 SCKLKPAPPCPLTLFFNSNPAKQKIVLVRSRTET 72 (264)
Q Consensus 39 ~~~lk~~~~c~~~~f~nsn~~~~k~v~~~~~t~~ 72 (264)
-||.-|..+||+.. +..-.+|+||.+|+=
T Consensus 99 P~r~~~g~~~~~~~-----~~~vD~vivREnteG 127 (337)
T d1w0da_ 99 PARLYPGVASPLSG-----NPGIDFVVVREGTEG 127 (337)
T ss_dssp EEECCTTCCCSBTT-----CCCCEEEEEEECSCS
T ss_pred eEeecCcccccccc-----CCCcCeeeHhhhhcC
Confidence 46777777776432 234689999999863
No 10
>d3c9ua1 d.79.4.1 (A:1-137) Thiamine monophosphate kinase (ThiL) N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=17.25 E-value=23 Score=25.55 Aligned_cols=15 Identities=27% Similarity=0.552 Sum_probs=12.6
Q ss_pred cccccccceecCccc
Q 024669 85 LAGEDSAAFDLKNQK 99 (264)
Q Consensus 85 lVGEDsA~F~~~~Qk 99 (264)
.+|+|+|++++++++
T Consensus 23 ~iGDDaavi~~~~~~ 37 (137)
T d3c9ua1 23 VIGDDTAPVEYCSKK 37 (137)
T ss_dssp STTSSSEEEEETTEE
T ss_pred CCCCCEEEEEcCCCc
Confidence 579999999998764
Done!