Query 024671
Match_columns 264
No_of_seqs 180 out of 1300
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 12:23:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024671.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024671hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ijp_A DHPR, dihydrodipicolina 100.0 4.1E-67 1.4E-71 478.9 24.6 239 1-260 33-286 (288)
2 1vm6_A DHPR, dihydrodipicolina 100.0 8.6E-67 2.9E-71 460.5 22.5 202 1-261 24-227 (228)
3 4f3y_A DHPR, dihydrodipicolina 100.0 5.4E-66 1.8E-70 468.5 24.4 239 1-260 19-271 (272)
4 3qy9_A DHPR, dihydrodipicolina 100.0 2.1E-63 7.1E-68 444.9 21.2 223 1-257 14-243 (243)
5 1dih_A Dihydrodipicolinate red 100.0 8.7E-62 3E-66 440.8 23.0 240 1-261 17-271 (273)
6 1p9l_A Dihydrodipicolinate red 100.0 1.8E-60 6.2E-65 426.3 24.4 219 1-260 12-244 (245)
7 1f06_A MESO-diaminopimelate D- 99.0 6.7E-11 2.3E-15 108.4 1.6 143 1-158 14-163 (320)
8 2yv2_A Succinyl-COA synthetase 98.9 4E-09 1.4E-13 96.1 7.7 105 1-118 25-133 (297)
9 1oi7_A Succinyl-COA synthetase 98.8 5.1E-09 1.7E-13 95.0 8.2 105 1-118 19-126 (288)
10 2yv1_A Succinyl-COA ligase [AD 98.8 7.3E-09 2.5E-13 94.2 8.6 105 1-118 25-132 (294)
11 2nu8_A Succinyl-COA ligase [AD 98.4 7.1E-07 2.4E-11 80.7 9.6 105 1-118 19-126 (288)
12 2dc1_A L-aspartate dehydrogena 98.2 7.9E-06 2.7E-10 70.9 10.0 125 1-153 11-140 (236)
13 3mwd_B ATP-citrate synthase; A 98.0 3.2E-05 1.1E-09 71.6 10.2 107 2-113 20-138 (334)
14 2fp4_A Succinyl-COA ligase [GD 97.3 0.0018 6E-08 58.9 11.5 101 1-114 26-131 (305)
15 3bio_A Oxidoreductase, GFO/IDH 97.3 0.00042 1.4E-08 62.6 7.1 114 1-127 20-139 (304)
16 3ff4_A Uncharacterized protein 97.1 0.0019 6.6E-08 51.1 8.2 98 2-120 20-117 (122)
17 3upl_A Oxidoreductase; rossman 96.7 0.0018 6.3E-08 62.0 6.0 139 1-153 34-198 (446)
18 1j5p_A Aspartate dehydrogenase 96.6 0.0029 9.8E-08 56.3 6.1 90 1-110 23-117 (253)
19 2d59_A Hypothetical protein PH 96.5 0.019 6.5E-07 46.1 9.9 100 1-119 37-136 (144)
20 3ing_A Homoserine dehydrogenas 96.4 0.0032 1.1E-07 57.8 5.5 145 1-165 15-182 (325)
21 3e9m_A Oxidoreductase, GFO/IDH 96.4 0.018 6E-07 52.0 10.2 108 1-115 16-128 (330)
22 3euw_A MYO-inositol dehydrogen 96.4 0.013 4.4E-07 53.0 9.1 108 1-116 15-127 (344)
23 3c1a_A Putative oxidoreductase 96.4 0.01 3.5E-07 53.0 8.4 116 1-126 21-143 (315)
24 3pff_A ATP-citrate synthase; p 96.3 0.011 3.7E-07 60.6 9.1 106 2-113 506-624 (829)
25 3cea_A MYO-inositol 2-dehydrog 96.2 0.05 1.7E-06 48.9 12.1 116 1-124 19-144 (346)
26 1ydw_A AX110P-like protein; st 96.2 0.03 1E-06 51.0 10.4 108 1-115 17-132 (362)
27 4hkt_A Inositol 2-dehydrogenas 96.1 0.021 7.3E-07 51.2 9.1 106 1-115 14-124 (331)
28 1iuk_A Hypothetical protein TT 96.1 0.035 1.2E-06 44.4 9.3 102 1-119 28-129 (140)
29 3evn_A Oxidoreductase, GFO/IDH 96.0 0.17 5.7E-06 45.4 14.6 116 1-124 16-139 (329)
30 3do5_A HOM, homoserine dehydro 95.9 0.0051 1.7E-07 56.4 4.2 120 1-124 13-153 (327)
31 1tlt_A Putative oxidoreductase 95.8 0.021 7.1E-07 51.1 7.4 104 1-114 16-125 (319)
32 3kux_A Putative oxidoreductase 95.8 0.041 1.4E-06 49.9 9.4 114 1-124 18-139 (352)
33 1y81_A Conserved hypothetical 95.6 0.091 3.1E-06 41.9 10.0 99 1-118 29-127 (138)
34 2ho3_A Oxidoreductase, GFO/IDH 95.6 0.13 4.3E-06 46.0 12.0 116 1-125 12-135 (325)
35 2glx_A 1,5-anhydro-D-fructose 95.6 0.084 2.9E-06 47.1 10.6 108 1-116 11-124 (332)
36 3q2i_A Dehydrogenase; rossmann 95.5 0.15 5E-06 46.2 12.0 115 1-123 24-146 (354)
37 3db2_A Putative NADPH-dependen 95.5 0.056 1.9E-06 49.0 9.2 115 1-123 16-137 (354)
38 3fhl_A Putative oxidoreductase 95.5 0.081 2.8E-06 48.2 10.2 114 1-124 16-137 (362)
39 3rc1_A Sugar 3-ketoreductase; 95.4 0.04 1.4E-06 50.1 7.9 116 1-124 38-161 (350)
40 3ezy_A Dehydrogenase; structur 95.3 0.032 1.1E-06 50.4 6.9 107 1-115 13-125 (344)
41 4ina_A Saccharopine dehydrogen 95.3 0.046 1.6E-06 51.1 8.0 80 57-146 76-167 (405)
42 3moi_A Probable dehydrogenase; 95.2 0.087 3E-06 48.5 9.8 108 1-116 14-126 (387)
43 4ew6_A D-galactose-1-dehydroge 95.2 0.13 4.6E-06 46.3 10.8 103 1-117 36-144 (330)
44 3e82_A Putative oxidoreductase 95.2 0.09 3.1E-06 48.0 9.6 115 1-125 18-140 (364)
45 1h6d_A Precursor form of gluco 95.2 0.086 2.9E-06 49.5 9.7 109 1-115 94-211 (433)
46 2g0t_A Conserved hypothetical 94.9 0.16 5.6E-06 46.9 10.7 85 12-105 49-144 (350)
47 3o9z_A Lipopolysaccaride biosy 94.9 0.24 8E-06 44.4 11.5 111 1-116 15-134 (312)
48 3mz0_A Inositol 2-dehydrogenas 94.9 0.18 6.1E-06 45.4 10.7 117 1-123 13-138 (344)
49 3e18_A Oxidoreductase; dehydro 94.7 0.12 4.2E-06 47.0 9.3 106 1-115 16-126 (359)
50 3gdo_A Uncharacterized oxidore 94.7 0.073 2.5E-06 48.5 7.6 114 1-124 16-137 (358)
51 3f4l_A Putative oxidoreductase 94.3 0.17 5.9E-06 45.6 9.1 116 1-124 13-137 (345)
52 3i23_A Oxidoreductase, GFO/IDH 94.3 0.37 1.3E-05 43.5 11.2 130 1-147 13-152 (349)
53 3ec7_A Putative dehydrogenase; 94.2 0.21 7.2E-06 45.4 9.4 119 1-125 34-161 (357)
54 2duw_A Putative COA-binding pr 93.8 0.23 7.8E-06 39.7 7.9 101 1-118 28-128 (145)
55 3mtj_A Homoserine dehydrogenas 93.7 0.055 1.9E-06 51.6 4.8 140 1-165 21-175 (444)
56 3c8m_A Homoserine dehydrogenas 93.4 0.05 1.7E-06 49.6 3.8 118 1-123 17-158 (331)
57 2ixa_A Alpha-N-acetylgalactosa 93.3 0.24 8.1E-06 46.5 8.3 110 1-114 31-151 (444)
58 3oa2_A WBPB; oxidoreductase, s 93.3 1.6 5.3E-05 39.0 13.4 110 1-115 15-134 (318)
59 3btv_A Galactose/lactose metab 93.3 0.35 1.2E-05 45.4 9.4 106 1-113 35-154 (438)
60 1b7g_O Protein (glyceraldehyde 92.8 0.16 5.5E-06 46.5 6.1 86 1-90 12-109 (340)
61 1zh8_A Oxidoreductase; TM0312, 92.7 0.45 1.5E-05 42.8 9.1 107 1-115 30-143 (340)
62 3m2t_A Probable dehydrogenase; 92.6 0.57 2E-05 42.5 9.6 110 1-117 16-131 (359)
63 3ip3_A Oxidoreductase, putativ 92.0 0.58 2E-05 41.9 8.8 98 11-114 22-129 (337)
64 1cf2_P Protein (glyceraldehyde 92.0 0.22 7.6E-06 45.5 6.0 84 1-93 12-112 (337)
65 3uuw_A Putative oxidoreductase 92.0 0.48 1.6E-05 41.8 8.0 106 1-116 17-128 (308)
66 3ic5_A Putative saccharopine d 91.9 0.15 5E-06 37.7 4.0 85 1-90 16-101 (118)
67 3u3x_A Oxidoreductase; structu 91.9 1.1 3.7E-05 40.8 10.6 104 5-116 42-150 (361)
68 3keo_A Redox-sensing transcrip 91.9 0.18 6.1E-06 43.4 5.0 104 1-119 95-202 (212)
69 3nkl_A UDP-D-quinovosamine 4-d 91.8 0.84 2.9E-05 35.2 8.4 24 1-24 15-39 (141)
70 3dty_A Oxidoreductase, GFO/IDH 91.3 0.93 3.2E-05 41.7 9.5 113 1-116 26-147 (398)
71 2vt3_A REX, redox-sensing tran 91.0 0.7 2.4E-05 39.6 7.8 103 1-121 96-201 (215)
72 4had_A Probable oxidoreductase 90.1 1.8 6E-05 38.7 10.0 107 2-116 35-148 (350)
73 2dt5_A AT-rich DNA-binding pro 90.1 0.56 1.9E-05 40.1 6.3 105 1-121 91-196 (211)
74 2nvw_A Galactose/lactose metab 89.5 1.2 4E-05 42.4 8.8 107 1-115 54-176 (479)
75 3ohs_X Trans-1,2-dihydrobenzen 89.2 1.7 5.7E-05 38.7 9.1 116 1-124 13-138 (334)
76 2czc_A Glyceraldehyde-3-phosph 89.1 0.6 2E-05 42.3 6.1 83 1-92 13-112 (334)
77 3v5n_A Oxidoreductase; structu 88.7 1.3 4.6E-05 41.0 8.4 114 1-117 51-173 (417)
78 3lua_A Response regulator rece 88.0 4 0.00014 30.4 9.4 73 43-116 35-114 (140)
79 3lte_A Response regulator; str 87.9 2 6.9E-05 31.6 7.5 74 43-117 36-113 (132)
80 1lc0_A Biliverdin reductase A; 87.9 1.9 6.4E-05 38.0 8.4 103 1-117 18-128 (294)
81 2p2s_A Putative oxidoreductase 87.8 5 0.00017 35.5 11.3 103 5-114 20-126 (336)
82 2ejw_A HDH, homoserine dehydro 87.5 0.3 1E-05 44.7 3.0 103 1-119 14-129 (332)
83 3kto_A Response regulator rece 87.5 2.6 9E-05 31.4 8.0 79 38-117 31-114 (136)
84 3abi_A Putative uncharacterize 87.0 0.55 1.9E-05 42.7 4.5 72 57-132 77-150 (365)
85 2obn_A Hypothetical protein; s 86.3 1.9 6.6E-05 39.7 7.7 92 3-103 24-126 (349)
86 1xea_A Oxidoreductase, GFO/IDH 86.0 2.6 8.8E-05 37.3 8.3 116 1-125 13-136 (323)
87 3gl9_A Response regulator; bet 85.2 4.7 0.00016 29.4 8.3 73 44-117 33-110 (122)
88 2zay_A Response regulator rece 84.9 10 0.00035 28.2 10.3 79 37-116 32-115 (147)
89 3t6k_A Response regulator rece 84.8 5.3 0.00018 29.8 8.5 74 43-117 34-112 (136)
90 2qxy_A Response regulator; reg 84.7 5.8 0.0002 29.4 8.7 73 39-112 30-105 (142)
91 3cnb_A DNA-binding response re 84.7 3.6 0.00012 30.4 7.5 71 44-116 41-117 (143)
92 2z2v_A Hypothetical protein PH 84.6 2.4 8.3E-05 38.8 7.6 120 1-132 27-150 (365)
93 3gt7_A Sensor protein; structu 84.5 5.7 0.00019 30.3 8.7 77 38-116 32-114 (154)
94 3oqb_A Oxidoreductase; structu 84.4 1.8 6.2E-05 39.2 6.6 68 44-115 73-144 (383)
95 2csu_A 457AA long hypothetical 84.2 4.6 0.00016 38.2 9.5 75 2-93 24-100 (457)
96 3eod_A Protein HNR; response r 84.0 5.4 0.00018 29.1 8.1 70 43-112 37-109 (130)
97 3d1l_A Putative NADP oxidoredu 83.9 0.82 2.8E-05 39.2 3.9 88 1-98 21-111 (266)
98 3cg0_A Response regulator rece 83.6 11 0.00037 27.6 9.9 69 43-112 40-112 (140)
99 1dbw_A Transcriptional regulat 83.4 8.2 0.00028 28.0 8.9 73 44-117 34-109 (126)
100 3f6p_A Transcriptional regulat 83.1 7.4 0.00025 28.2 8.5 72 44-116 33-106 (120)
101 3kht_A Response regulator; PSI 82.8 12 0.00043 27.7 11.4 74 43-117 37-116 (144)
102 3dmy_A Protein FDRA; predicted 82.6 1.9 6.6E-05 41.4 6.2 57 57-114 36-94 (480)
103 2yxb_A Coenzyme B12-dependent 82.3 18 0.0006 29.0 12.7 78 47-126 59-144 (161)
104 1srr_A SPO0F, sporulation resp 82.2 5.7 0.0002 28.7 7.6 72 44-116 34-108 (124)
105 2rjn_A Response regulator rece 81.9 12 0.00041 28.2 9.6 78 38-116 32-113 (154)
106 2pl1_A Transcriptional regulat 81.3 8.7 0.0003 27.4 8.2 73 44-117 31-106 (121)
107 2qzj_A Two-component response 81.3 6.8 0.00023 29.2 7.9 72 44-116 35-108 (136)
108 1qkk_A DCTD, C4-dicarboxylate 81.0 5.8 0.0002 30.1 7.5 73 43-116 33-108 (155)
109 1k66_A Phytochrome response re 80.3 14 0.00049 27.1 9.4 73 43-116 38-125 (149)
110 3e5r_O PP38, glyceraldehyde-3- 80.3 3.9 0.00013 37.3 7.1 80 1-84 14-119 (337)
111 3jte_A Response regulator rece 80.3 14 0.00047 27.3 9.3 72 44-117 34-111 (143)
112 2ph5_A Homospermidine synthase 80.1 1 3.4E-05 43.4 3.2 83 1-89 24-114 (480)
113 3cfy_A Putative LUXO repressor 80.1 5.6 0.00019 29.7 7.0 76 39-116 30-109 (137)
114 4gqa_A NAD binding oxidoreduct 80.0 6.5 0.00022 35.9 8.6 97 12-116 57-158 (412)
115 1k68_A Phytochrome response re 79.8 15 0.00051 26.6 10.4 74 43-117 34-119 (140)
116 3m6m_D Sensory/regulatory prot 79.3 14 0.0005 27.6 9.2 79 38-117 39-124 (143)
117 3snk_A Response regulator CHEY 79.1 4.5 0.00015 29.9 6.1 78 38-116 40-120 (135)
118 4fb5_A Probable oxidoreductase 79.0 15 0.00052 32.5 10.7 97 12-116 55-156 (393)
119 1u8f_O GAPDH, glyceraldehyde-3 78.7 2.6 9.1E-05 38.3 5.5 88 1-91 14-124 (335)
120 1nvm_B Acetaldehyde dehydrogen 78.0 3.4 0.00012 37.1 5.9 87 1-90 15-105 (312)
121 1jbe_A Chemotaxis protein CHEY 77.9 12 0.00042 26.9 8.2 72 44-116 36-112 (128)
122 3c85_A Putative glutathione-re 77.7 15 0.00052 29.1 9.3 117 1-125 50-172 (183)
123 1tmy_A CHEY protein, TMY; chem 77.3 16 0.00055 25.9 8.6 71 45-116 35-108 (120)
124 2rdm_A Response regulator rece 77.1 6.1 0.00021 28.7 6.3 53 43-95 35-92 (132)
125 1xhf_A DYE resistance, aerobic 76.8 18 0.0006 25.8 9.0 73 44-117 34-108 (123)
126 2h9a_A Carbon monoxide dehydro 76.8 8.6 0.0003 36.5 8.6 66 60-130 157-222 (445)
127 3hv2_A Response regulator/HD d 76.6 22 0.00074 26.7 10.4 80 37-116 38-120 (153)
128 1y80_A Predicted cobalamin bin 76.6 31 0.001 28.4 11.3 69 50-124 132-208 (210)
129 3cz5_A Two-component response 76.5 13 0.00046 27.9 8.3 72 44-116 38-112 (153)
130 3l49_A ABC sugar (ribose) tran 76.3 33 0.0011 28.6 11.6 41 50-90 54-94 (291)
131 2gkg_A Response regulator homo 76.2 8.2 0.00028 27.6 6.7 73 43-117 35-113 (127)
132 2g1u_A Hypothetical protein TM 76.2 25 0.00084 27.2 12.4 113 1-121 30-146 (155)
133 2a9o_A Response regulator; ess 75.8 14 0.00049 26.0 7.9 71 45-116 33-105 (120)
134 4djd_C C/Fe-SP, corrinoid/iron 75.2 12 0.00042 35.5 9.1 70 57-130 153-223 (446)
135 3ilh_A Two component response 75.0 13 0.00044 27.4 7.7 79 39-117 37-127 (146)
136 3grc_A Sensor protein, kinase; 74.7 11 0.00037 27.8 7.2 74 43-117 36-115 (140)
137 1jay_A Coenzyme F420H2:NADP+ o 74.7 8.4 0.00029 31.4 7.1 83 1-93 12-101 (212)
138 1p6q_A CHEY2; chemotaxis, sign 74.6 9 0.00031 27.7 6.6 75 40-116 34-114 (129)
139 4e7p_A Response regulator; DNA 74.5 16 0.00056 27.3 8.3 79 38-117 47-128 (150)
140 3nhm_A Response regulator; pro 74.1 7.1 0.00024 28.5 6.0 74 42-117 32-110 (133)
141 1mb3_A Cell division response 74.0 6.4 0.00022 28.3 5.6 72 45-117 33-109 (124)
142 3heb_A Response regulator rece 73.3 19 0.00063 27.0 8.4 76 55-133 57-137 (152)
143 1ebf_A Homoserine dehydrogenas 73.3 5.2 0.00018 36.7 5.9 59 58-117 85-148 (358)
144 3crn_A Response regulator rece 72.8 14 0.00048 27.0 7.4 73 44-117 34-109 (132)
145 3cky_A 2-hydroxymethyl glutara 72.8 14 0.00047 31.8 8.3 88 1-100 15-111 (301)
146 1rm4_O Glyceraldehyde 3-phosph 72.3 14 0.00049 33.6 8.5 88 1-92 12-125 (337)
147 1gad_O D-glyceraldehyde-3-phos 71.9 12 0.00042 33.8 8.0 89 1-92 12-122 (330)
148 4gmf_A Yersiniabactin biosynth 71.8 5.6 0.00019 36.6 5.8 118 1-130 17-146 (372)
149 2qr3_A Two-component system re 71.7 10 0.00035 27.8 6.4 73 43-116 33-113 (140)
150 3bul_A Methionine synthase; tr 71.5 49 0.0017 32.4 12.6 78 48-125 140-223 (579)
151 3m9w_A D-xylose-binding peripl 71.5 28 0.00097 29.5 10.1 41 50-90 51-91 (313)
152 1mvo_A PHOP response regulator 71.4 10 0.00035 27.7 6.3 73 44-117 34-109 (136)
153 3b1j_A Glyceraldehyde 3-phosph 70.6 15 0.00053 33.3 8.4 83 1-86 13-119 (339)
154 3llv_A Exopolyphosphatase-rela 70.5 29 0.00098 26.1 8.9 116 1-123 17-134 (141)
155 2qvg_A Two component response 70.2 14 0.00049 27.1 6.9 74 43-117 39-123 (143)
156 1i3c_A Response regulator RCP1 70.1 29 0.00099 25.9 8.8 74 43-117 40-125 (149)
157 3c24_A Putative oxidoreductase 70.0 1.8 6.2E-05 37.6 2.0 99 1-114 23-125 (286)
158 3hdg_A Uncharacterized protein 69.9 20 0.00068 26.2 7.7 73 43-117 37-113 (137)
159 3l6u_A ABC-type sugar transpor 69.6 46 0.0016 27.7 10.8 41 50-90 57-97 (293)
160 1kgs_A DRRD, DNA binding respo 69.0 11 0.00038 30.4 6.5 73 44-117 33-108 (225)
161 3q9s_A DNA-binding response re 68.8 32 0.0011 28.7 9.6 79 38-117 62-142 (249)
162 2hmt_A YUAA protein; RCK, KTN, 68.6 33 0.0011 25.3 11.3 116 1-124 17-136 (144)
163 3h5i_A Response regulator/sens 68.2 9.2 0.00031 28.4 5.5 52 43-94 35-90 (140)
164 3hdv_A Response regulator; PSI 68.2 12 0.00042 27.3 6.1 73 44-117 38-115 (136)
165 1ff9_A Saccharopine reductase; 68.1 24 0.00081 33.1 9.4 112 1-118 14-129 (450)
166 3b2n_A Uncharacterized protein 67.9 18 0.00063 26.4 7.1 72 44-116 36-110 (133)
167 1zgz_A Torcad operon transcrip 67.7 30 0.001 24.5 9.5 72 45-117 34-107 (122)
168 2jba_A Phosphate regulon trans 67.5 7.4 0.00025 28.1 4.7 49 45-94 34-87 (127)
169 3ghf_A Septum site-determining 67.4 3.8 0.00013 31.8 3.1 52 60-112 49-103 (120)
170 3hzh_A Chemotaxis response reg 67.0 38 0.0013 25.5 10.0 72 44-116 68-144 (157)
171 3cg4_A Response regulator rece 66.9 7.1 0.00024 28.9 4.5 55 39-93 33-92 (142)
172 3dhn_A NAD-dependent epimerase 66.7 19 0.00064 29.1 7.5 19 1-19 16-34 (227)
173 1zh2_A KDP operon transcriptio 66.5 31 0.0011 24.2 8.1 71 45-116 33-105 (121)
174 3r0j_A Possible two component 66.2 21 0.00072 29.6 7.9 79 38-117 48-129 (250)
175 3ezx_A MMCP 1, monomethylamine 66.1 41 0.0014 28.2 9.7 70 48-123 134-213 (215)
176 3dqp_A Oxidoreductase YLBE; al 65.9 15 0.00053 29.7 6.8 19 1-19 12-30 (219)
177 3eul_A Possible nitrate/nitrit 65.6 25 0.00084 26.3 7.5 72 44-116 48-122 (152)
178 2hq1_A Glucose/ribitol dehydro 65.2 24 0.00083 28.9 8.0 74 1-93 17-94 (247)
179 3cu5_A Two component transcrip 65.1 21 0.00071 26.5 7.0 49 44-93 36-87 (141)
180 2x5j_O E4PDH, D-erythrose-4-ph 65.0 17 0.00059 32.9 7.5 88 1-91 13-126 (339)
181 3h5l_A Putative branched-chain 65.0 28 0.00095 31.1 8.9 57 44-100 206-263 (419)
182 2gf2_A Hibadh, 3-hydroxyisobut 64.7 17 0.0006 31.1 7.2 87 1-100 11-104 (296)
183 2lpm_A Two-component response 64.4 3.7 0.00013 31.7 2.5 52 43-95 39-91 (123)
184 4da9_A Short-chain dehydrogena 64.3 60 0.0021 27.6 10.7 73 1-92 41-117 (280)
185 2rir_A Dipicolinate synthase, 64.2 7.4 0.00025 34.1 4.8 107 1-118 168-274 (300)
186 4dad_A Putative pilus assembly 64.1 19 0.00067 26.6 6.6 72 45-117 53-129 (146)
187 3tri_A Pyrroline-5-carboxylate 64.1 37 0.0013 29.3 9.3 91 1-102 14-111 (280)
188 3is3_A 17BETA-hydroxysteroid d 64.1 32 0.0011 29.0 8.8 73 1-92 30-106 (270)
189 2d2i_A Glyceraldehyde 3-phosph 63.9 21 0.00072 33.1 8.0 83 1-86 13-119 (380)
190 3dr3_A N-acetyl-gamma-glutamyl 63.7 22 0.00075 32.2 7.9 86 1-92 16-109 (337)
191 3c3m_A Response regulator rece 63.7 29 0.001 25.4 7.5 48 44-91 34-86 (138)
192 3rqi_A Response regulator prot 63.3 22 0.00076 27.9 7.1 55 39-94 33-90 (184)
193 3td9_A Branched chain amino ac 63.2 48 0.0016 28.6 10.0 55 44-99 191-246 (366)
194 3flu_A DHDPS, dihydrodipicolin 63.1 12 0.00039 33.2 5.8 31 69-99 28-64 (297)
195 1t4b_A Aspartate-semialdehyde 62.6 16 0.00056 33.4 6.9 80 2-91 14-99 (367)
196 3e96_A Dihydrodipicolinate syn 62.5 8.3 0.00028 34.5 4.8 23 69-91 33-57 (316)
197 1hdg_O Holo-D-glyceraldehyde-3 62.5 30 0.001 31.3 8.6 80 1-83 11-114 (332)
198 3f6c_A Positive transcription 62.5 16 0.00056 26.4 5.8 67 48-116 37-107 (134)
199 2axq_A Saccharopine dehydrogen 62.4 17 0.00059 34.3 7.3 120 1-128 34-161 (467)
200 2ahr_A Putative pyrroline carb 61.8 17 0.00057 30.6 6.5 90 1-102 14-103 (259)
201 3l21_A DHDPS, dihydrodipicolin 61.5 15 0.00053 32.6 6.4 32 69-100 36-73 (304)
202 2j48_A Two-component sensor ki 61.5 14 0.00047 25.7 5.0 51 44-94 32-87 (119)
203 2h78_A Hibadh, 3-hydroxyisobut 61.4 20 0.00069 30.9 7.1 102 1-115 14-125 (302)
204 1a04_A Nitrate/nitrite respons 61.1 35 0.0012 27.2 8.1 73 44-117 38-113 (215)
205 3i42_A Response regulator rece 60.9 14 0.00048 26.6 5.2 48 43-90 33-85 (127)
206 3g1w_A Sugar ABC transporter; 60.8 51 0.0018 27.6 9.5 41 50-90 54-94 (305)
207 2gwr_A DNA-binding response re 60.8 15 0.0005 30.3 5.8 72 45-117 37-110 (238)
208 2b4a_A BH3024; flavodoxin-like 60.7 14 0.00047 27.2 5.2 56 39-94 41-100 (138)
209 2zyd_A 6-phosphogluconate dehy 60.7 21 0.0007 33.8 7.4 89 1-94 26-118 (480)
210 3mm4_A Histidine kinase homolo 60.6 34 0.0012 27.6 8.0 76 39-115 88-184 (206)
211 4iiu_A 3-oxoacyl-[acyl-carrier 60.6 26 0.00089 29.5 7.5 73 1-92 38-114 (267)
212 4gbj_A 6-phosphogluconate dehy 60.4 53 0.0018 28.7 9.7 21 1-22 16-36 (297)
213 1dz3_A Stage 0 sporulation pro 60.1 26 0.00088 25.3 6.5 49 45-93 36-87 (130)
214 3kcn_A Adenylate cyclase homol 60.1 50 0.0017 24.5 9.2 74 43-116 33-110 (151)
215 3fwz_A Inner membrane protein 60.0 53 0.0018 24.8 9.6 117 1-123 18-136 (140)
216 2yxg_A DHDPS, dihydrodipicolin 59.9 18 0.00061 31.8 6.5 11 83-93 70-80 (289)
217 1hdo_A Biliverdin IX beta redu 59.9 26 0.00089 27.5 7.0 19 1-19 15-33 (206)
218 4gnr_A ABC transporter substra 59.5 66 0.0023 27.6 10.2 53 44-97 183-236 (353)
219 3tak_A DHDPS, dihydrodipicolin 59.4 14 0.00047 32.6 5.6 31 69-99 22-58 (291)
220 1s8n_A Putative antiterminator 59.3 30 0.001 27.4 7.4 52 44-96 45-98 (205)
221 3n53_A Response regulator rece 59.2 8.1 0.00028 28.6 3.6 51 44-94 33-88 (140)
222 3qiv_A Short-chain dehydrogena 59.2 74 0.0025 26.1 10.5 72 1-92 21-96 (253)
223 2i2x_B MTAC, methyltransferase 59.1 85 0.0029 26.8 11.8 69 51-125 168-242 (258)
224 2r25_B Osmosensing histidine p 58.8 39 0.0013 24.6 7.5 60 56-117 51-115 (133)
225 3v2g_A 3-oxoacyl-[acyl-carrier 58.8 49 0.0017 28.1 9.0 73 1-92 43-119 (271)
226 3e48_A Putative nucleoside-dip 58.2 24 0.00082 29.7 6.9 81 1-87 12-102 (289)
227 2ehh_A DHDPS, dihydrodipicolin 58.2 18 0.00061 31.9 6.2 14 82-95 69-82 (294)
228 3fkr_A L-2-keto-3-deoxyarabona 58.0 13 0.00045 33.1 5.3 15 81-95 76-90 (309)
229 3imf_A Short chain dehydrogena 57.9 50 0.0017 27.6 8.9 72 1-92 18-93 (257)
230 3dz1_A Dihydrodipicolinate syn 57.9 16 0.00055 32.6 5.9 12 82-93 76-87 (313)
231 2r00_A Aspartate-semialdehyde 57.8 41 0.0014 30.2 8.6 80 2-91 16-98 (336)
232 2csu_A 457AA long hypothetical 57.8 65 0.0022 30.1 10.3 78 48-127 358-447 (457)
233 3cpr_A Dihydrodipicolinate syn 57.7 19 0.00065 31.9 6.3 23 69-91 37-61 (304)
234 3n0w_A ABC branched chain amin 57.4 43 0.0015 29.2 8.6 57 44-101 184-243 (379)
235 2oqr_A Sensory transduction pr 57.4 20 0.0007 28.9 6.1 50 44-94 35-86 (230)
236 4e3z_A Putative oxidoreductase 57.3 25 0.00087 29.6 6.9 73 1-92 38-114 (272)
237 1f6y_A 5-methyltetrahydrofolat 57.3 21 0.00072 31.2 6.4 67 44-113 55-124 (262)
238 1yio_A Response regulatory pro 57.3 13 0.00046 29.6 4.8 47 44-90 35-84 (208)
239 3hut_A Putative branched-chain 57.3 51 0.0017 28.3 9.0 56 44-100 181-237 (358)
240 3o38_A Short chain dehydrogena 57.2 52 0.0018 27.4 8.8 72 1-92 35-111 (266)
241 2qv0_A Protein MRKE; structura 57.2 43 0.0015 24.4 7.4 51 44-94 42-94 (143)
242 1xky_A Dihydrodipicolinate syn 57.1 16 0.00056 32.3 5.8 23 69-91 33-57 (301)
243 3qze_A DHDPS, dihydrodipicolin 57.1 13 0.00043 33.3 5.0 31 69-99 44-80 (314)
244 2wkj_A N-acetylneuraminate lya 56.7 21 0.00073 31.6 6.5 23 69-91 32-56 (303)
245 3a10_A Response regulator; pho 56.5 17 0.00058 25.6 4.8 47 44-90 32-81 (116)
246 3gk3_A Acetoacetyl-COA reducta 56.5 38 0.0013 28.5 7.8 73 1-92 37-113 (269)
247 4dpp_A DHDPS 2, dihydrodipicol 56.4 20 0.0007 32.9 6.4 42 69-110 80-133 (360)
248 4gwg_A 6-phosphogluconate dehy 56.4 27 0.00093 33.2 7.5 90 1-93 15-107 (484)
249 2yci_X 5-methyltetrahydrofolat 56.3 43 0.0015 29.3 8.3 52 60-113 80-133 (271)
250 1vpd_A Tartronate semialdehyde 56.1 42 0.0015 28.6 8.2 81 1-93 16-103 (299)
251 8abp_A L-arabinose-binding pro 56.1 61 0.0021 27.1 9.1 40 50-89 50-89 (306)
252 1obf_O Glyceraldehyde 3-phosph 56.1 28 0.00095 31.7 7.2 84 1-87 12-120 (335)
253 3k96_A Glycerol-3-phosphate de 55.8 25 0.00086 31.8 6.9 110 1-117 40-167 (356)
254 3qfe_A Putative dihydrodipicol 55.7 15 0.00051 32.9 5.3 15 81-95 79-93 (318)
255 3lkb_A Probable branched-chain 55.6 60 0.0021 28.4 9.3 55 44-99 185-240 (392)
256 3h5d_A DHDPS, dihydrodipicolin 55.5 17 0.00058 32.4 5.6 31 69-99 28-64 (311)
257 4h3v_A Oxidoreductase domain p 55.4 70 0.0024 28.0 9.7 95 14-116 38-140 (390)
258 2rcy_A Pyrroline carboxylate r 55.1 35 0.0012 28.5 7.3 83 1-101 15-103 (262)
259 3oid_A Enoyl-[acyl-carrier-pro 55.1 41 0.0014 28.3 7.8 73 1-92 16-92 (258)
260 2o1e_A YCDH; alpha-beta protei 55.0 23 0.00078 31.5 6.4 42 68-109 225-266 (312)
261 2ep5_A 350AA long hypothetical 54.9 25 0.00084 31.8 6.7 83 1-92 16-111 (350)
262 2jk1_A HUPR, hydrogenase trans 54.9 58 0.002 23.6 8.2 73 44-116 31-106 (139)
263 3sju_A Keto reductase; short-c 54.7 35 0.0012 29.1 7.4 72 1-92 36-111 (279)
264 2lnd_A De novo designed protei 54.6 14 0.00049 27.1 4.0 43 62-104 31-73 (112)
265 3tjr_A Short chain dehydrogena 54.6 1E+02 0.0035 26.4 11.4 72 1-92 43-118 (301)
266 3osu_A 3-oxoacyl-[acyl-carrier 54.5 39 0.0013 28.0 7.5 74 1-93 16-93 (246)
267 3snr_A Extracellular ligand-bi 54.5 60 0.002 27.6 8.9 57 44-101 177-234 (362)
268 1f6k_A N-acetylneuraminate lya 54.4 21 0.00072 31.4 6.0 23 69-91 24-49 (293)
269 1pq4_A Periplasmic binding pro 54.4 28 0.00097 30.5 6.8 49 67-115 222-270 (291)
270 1dcf_A ETR1 protein; beta-alph 54.4 58 0.002 23.5 7.8 73 43-117 37-117 (136)
271 3pwk_A Aspartate-semialdehyde 54.2 58 0.002 29.8 9.1 81 2-92 15-98 (366)
272 3pef_A 6-phosphogluconate dehy 54.0 47 0.0016 28.3 8.1 84 1-96 12-101 (287)
273 3a5f_A Dihydrodipicolinate syn 53.9 18 0.00061 31.9 5.4 23 69-91 22-46 (291)
274 3on7_A Oxidoreductase, iron/as 53.6 9.3 0.00032 33.6 3.5 37 62-99 6-42 (280)
275 3s5o_A 4-hydroxy-2-oxoglutarat 53.1 18 0.0006 32.2 5.3 23 69-91 35-59 (307)
276 2r8w_A AGR_C_1641P; APC7498, d 52.9 22 0.00075 32.1 5.9 31 69-99 55-91 (332)
277 2v9d_A YAGE; dihydrodipicolini 52.9 21 0.00072 32.3 5.9 23 69-91 52-76 (343)
278 3gbv_A Putative LACI-family tr 52.9 54 0.0018 27.3 8.2 41 50-90 62-102 (304)
279 3m5v_A DHDPS, dihydrodipicolin 52.7 22 0.00075 31.4 5.8 13 82-94 77-89 (301)
280 3rui_A Ubiquitin-like modifier 52.4 10 0.00036 34.6 3.7 36 57-93 139-175 (340)
281 3daq_A DHDPS, dihydrodipicolin 52.2 20 0.00067 31.6 5.4 23 69-91 23-47 (292)
282 3tzq_B Short-chain type dehydr 52.1 56 0.0019 27.5 8.3 72 1-93 23-96 (271)
283 2raf_A Putative dinucleotide-b 52.0 43 0.0015 27.4 7.3 18 1-18 30-47 (209)
284 3cps_A Glyceraldehyde 3-phosph 51.9 26 0.0009 32.0 6.3 85 1-88 28-136 (354)
285 2ph3_A 3-oxoacyl-[acyl carrier 51.8 42 0.0014 27.3 7.2 73 1-92 13-90 (245)
286 1o5k_A DHDPS, dihydrodipicolin 51.7 20 0.00068 31.8 5.4 13 82-94 81-93 (306)
287 2nuw_A 2-keto-3-deoxygluconate 51.4 13 0.00043 32.8 4.0 34 69-102 20-59 (288)
288 2r91_A 2-keto-3-deoxy-(6-phosp 51.1 13 0.00044 32.7 4.0 31 69-99 19-55 (286)
289 3si9_A DHDPS, dihydrodipicolin 51.1 16 0.00056 32.7 4.7 12 82-93 91-102 (315)
290 3na8_A Putative dihydrodipicol 50.9 14 0.00048 33.1 4.3 23 69-91 45-69 (315)
291 2pgd_A 6-phosphogluconate dehy 50.9 47 0.0016 31.2 8.2 108 1-114 13-128 (482)
292 3l9w_A Glutathione-regulated p 50.7 79 0.0027 29.1 9.5 117 1-124 15-134 (413)
293 4dll_A 2-hydroxy-3-oxopropiona 50.5 53 0.0018 28.8 8.0 81 1-92 42-127 (320)
294 3pdu_A 3-hydroxyisobutyrate de 50.5 27 0.00092 30.0 6.0 22 1-23 12-33 (287)
295 2o23_A HADH2 protein; HSD17B10 50.5 54 0.0018 27.1 7.7 71 1-92 24-96 (265)
296 3edm_A Short chain dehydrogena 50.5 42 0.0014 28.2 7.1 73 1-92 20-96 (259)
297 1w3i_A EDA, 2-keto-3-deoxy glu 50.4 15 0.0005 32.5 4.3 31 69-99 20-56 (293)
298 3qha_A Putative oxidoreductase 50.4 81 0.0028 27.1 9.2 80 1-92 26-108 (296)
299 2iz1_A 6-phosphogluconate dehy 50.3 40 0.0014 31.6 7.5 88 1-94 16-108 (474)
300 3tfo_A Putative 3-oxoacyl-(acy 50.1 36 0.0012 29.0 6.7 73 1-93 16-92 (264)
301 3b4u_A Dihydrodipicolinate syn 50.1 15 0.0005 32.5 4.2 11 83-93 73-83 (294)
302 2c07_A 3-oxoacyl-(acyl-carrier 50.1 43 0.0015 28.5 7.2 32 61-92 98-131 (285)
303 3sm9_A Mglur3, metabotropic gl 49.6 75 0.0025 29.4 9.3 49 45-94 230-280 (479)
304 3cmc_O GAPDH, glyceraldehyde-3 49.6 40 0.0014 30.5 7.1 80 1-83 12-113 (334)
305 2qsj_A DNA-binding response re 49.5 20 0.00068 26.8 4.5 49 44-93 36-88 (154)
306 3r1i_A Short-chain type dehydr 49.5 61 0.0021 27.5 8.1 72 1-92 44-119 (276)
307 1ys7_A Transcriptional regulat 49.2 16 0.00055 29.6 4.1 50 43-93 37-89 (233)
308 3rot_A ABC sugar transporter, 49.1 38 0.0013 28.5 6.6 41 50-90 54-94 (297)
309 3uug_A Multiple sugar-binding 48.7 37 0.0013 28.9 6.6 40 50-89 52-91 (330)
310 4dmm_A 3-oxoacyl-[acyl-carrier 48.7 54 0.0018 27.7 7.6 74 1-93 40-117 (269)
311 2uvd_A 3-oxoacyl-(acyl-carrier 48.5 56 0.0019 26.9 7.6 72 1-92 16-92 (246)
312 3jy6_A Transcriptional regulat 48.1 1.1E+02 0.0039 25.0 11.0 38 50-90 56-93 (276)
313 1lss_A TRK system potassium up 48.1 77 0.0026 23.0 11.7 115 1-123 15-133 (140)
314 2ojp_A DHDPS, dihydrodipicolin 47.8 15 0.00052 32.3 3.9 16 81-96 69-84 (292)
315 1p2f_A Response regulator; DRR 47.4 65 0.0022 25.6 7.6 72 43-117 31-105 (220)
316 2p4q_A 6-phosphogluconate dehy 47.4 51 0.0017 31.3 7.8 88 1-94 21-114 (497)
317 2rfg_A Dihydrodipicolinate syn 47.4 18 0.00062 32.0 4.4 12 82-93 69-80 (297)
318 4a7p_A UDP-glucose dehydrogena 47.0 33 0.0011 32.2 6.3 109 1-118 19-164 (446)
319 2ozp_A N-acetyl-gamma-glutamyl 47.0 49 0.0017 29.8 7.3 80 1-92 16-102 (345)
320 3rih_A Short chain dehydrogena 46.9 1.3E+02 0.0044 25.8 9.9 72 1-92 53-129 (293)
321 3obb_A Probable 3-hydroxyisobu 46.8 46 0.0016 29.2 7.0 22 1-23 14-35 (300)
322 3ioy_A Short-chain dehydrogena 46.5 91 0.0031 27.1 8.9 72 1-92 20-97 (319)
323 3ucx_A Short chain dehydrogena 46.3 51 0.0017 27.7 7.0 72 1-92 23-98 (264)
324 3tz6_A Aspartate-semialdehyde 46.2 84 0.0029 28.4 8.8 111 2-123 14-139 (344)
325 3elf_A Fructose-bisphosphate a 46.1 35 0.0012 31.3 6.1 46 45-90 8-53 (349)
326 2ayx_A Sensor kinase protein R 46.0 85 0.0029 26.1 8.3 80 37-117 153-235 (254)
327 1yb4_A Tartronic semialdehyde 46.0 37 0.0013 28.9 6.1 79 1-92 14-99 (295)
328 2r6j_A Eugenol synthase 1; phe 46.0 1.1E+02 0.0039 25.8 9.4 19 1-19 23-41 (318)
329 2pln_A HP1043, response regula 45.7 71 0.0024 23.0 7.0 55 40-97 45-101 (137)
330 4ej6_A Putative zinc-binding d 45.7 9.1 0.00031 34.5 2.2 32 57-89 253-285 (370)
331 2h9a_B CO dehydrogenase/acetyl 45.3 80 0.0028 28.2 8.4 68 60-129 124-195 (310)
332 1w25_A Stalked-cell differenti 45.3 64 0.0022 29.2 7.9 68 44-112 32-105 (459)
333 3doj_A AT3G25530, dehydrogenas 45.2 49 0.0017 28.8 6.9 64 1-75 32-95 (310)
334 3u5t_A 3-oxoacyl-[acyl-carrier 45.1 40 0.0014 28.6 6.2 74 1-93 39-116 (267)
335 4fo4_A Inosine 5'-monophosphat 45.1 51 0.0017 30.2 7.2 53 50-103 113-169 (366)
336 3tox_A Short chain dehydrogena 44.9 57 0.0019 27.9 7.1 72 1-92 20-95 (280)
337 4fc7_A Peroxisomal 2,4-dienoyl 44.8 77 0.0026 26.8 8.0 72 1-92 39-115 (277)
338 3qm3_A Fructose-bisphosphate a 44.8 38 0.0013 31.1 6.2 48 43-90 17-64 (357)
339 2izz_A Pyrroline-5-carboxylate 44.7 76 0.0026 27.7 8.1 91 1-102 33-131 (322)
340 2ioy_A Periplasmic sugar-bindi 44.6 1.3E+02 0.0045 24.8 9.9 39 50-88 50-88 (283)
341 2x7x_A Sensor protein; transfe 44.6 1.4E+02 0.005 25.2 11.3 40 50-89 55-94 (325)
342 2uyy_A N-PAC protein; long-cha 44.5 53 0.0018 28.3 7.0 80 1-92 41-127 (316)
343 3n74_A 3-ketoacyl-(acyl-carrie 44.3 1.3E+02 0.0045 24.7 9.5 71 1-92 21-93 (261)
344 3l6e_A Oxidoreductase, short-c 44.3 69 0.0024 26.4 7.4 72 1-93 15-88 (235)
345 1e3i_A Alcohol dehydrogenase, 44.0 24 0.00083 31.5 4.8 32 57-89 265-298 (376)
346 1i36_A Conserved hypothetical 43.8 94 0.0032 25.8 8.3 89 1-102 11-100 (264)
347 2yyy_A Glyceraldehyde-3-phosph 43.6 13 0.00043 33.9 2.8 83 1-92 13-115 (343)
348 3gt0_A Pyrroline-5-carboxylate 43.6 23 0.00079 29.7 4.3 90 1-101 13-109 (247)
349 3ks9_A Mglur1, metabotropic gl 43.5 90 0.0031 29.0 8.8 49 45-94 242-295 (496)
350 3h1g_A Chemotaxis protein CHEY 43.4 87 0.003 22.3 7.8 71 45-116 38-114 (129)
351 4dup_A Quinone oxidoreductase; 43.4 11 0.00037 33.6 2.3 18 1-18 180-197 (353)
352 1geg_A Acetoin reductase; SDR 43.2 62 0.0021 26.8 7.0 72 1-92 14-89 (256)
353 3vk5_A MOEO5; TIM barrel, tran 43.2 65 0.0022 28.7 7.3 50 61-110 43-101 (286)
354 2fvy_A D-galactose-binding per 43.2 1.4E+02 0.0048 24.7 12.0 41 50-90 52-92 (309)
355 3bre_A Probable two-component 43.1 65 0.0022 27.9 7.4 59 37-96 43-106 (358)
356 1yb1_A 17-beta-hydroxysteroid 43.1 63 0.0022 27.1 7.1 72 1-92 43-118 (272)
357 2wqp_A Polysialic acid capsule 42.9 51 0.0017 30.2 6.7 76 61-149 151-238 (349)
358 2b4r_O Glyceraldehyde-3-phosph 42.8 37 0.0013 31.1 5.8 84 1-87 22-129 (345)
359 1jub_A Dihydroorotate dehydrog 42.8 90 0.0031 27.1 8.3 51 66-116 103-171 (311)
360 4a2c_A Galactitol-1-phosphate 42.7 37 0.0013 29.6 5.7 35 57-92 205-239 (346)
361 3to5_A CHEY homolog; alpha(5)b 42.6 77 0.0026 24.2 7.0 74 43-117 43-121 (134)
362 4fn4_A Short chain dehydrogena 42.6 70 0.0024 27.5 7.3 71 1-91 19-93 (254)
363 3oig_A Enoyl-[acyl-carrier-pro 42.5 61 0.0021 27.0 6.9 76 1-93 21-98 (266)
364 3awd_A GOX2181, putative polyo 42.4 81 0.0028 25.8 7.6 72 1-92 25-100 (260)
365 2c0c_A Zinc binding alcohol de 42.4 15 0.0005 33.0 3.0 85 1-89 176-262 (362)
366 1pgj_A 6PGDH, 6-PGDH, 6-phosph 42.3 59 0.002 30.5 7.3 88 1-94 12-108 (478)
367 3o26_A Salutaridine reductase; 42.3 64 0.0022 27.2 7.0 73 1-93 24-102 (311)
368 1edo_A Beta-keto acyl carrier 42.3 1.3E+02 0.0046 24.2 10.3 73 1-92 13-89 (244)
369 3m2p_A UDP-N-acetylglucosamine 42.2 70 0.0024 27.1 7.3 76 1-86 14-105 (311)
370 1zem_A Xylitol dehydrogenase; 42.2 74 0.0025 26.5 7.4 72 1-92 19-94 (262)
371 3eb2_A Putative dihydrodipicol 42.2 17 0.00057 32.2 3.3 23 69-91 25-49 (300)
372 1v8a_A Hydroxyethylthiazole ki 42.1 33 0.0011 29.7 5.1 58 57-116 56-123 (265)
373 2e4u_A Metabotropic glutamate 41.9 1.1E+02 0.0038 28.6 9.3 49 45-94 231-281 (555)
374 3nrc_A Enoyl-[acyl-carrier-pro 41.8 1.4E+02 0.0049 25.0 9.3 71 1-93 40-114 (280)
375 2jhf_A Alcohol dehydrogenase E 41.8 33 0.0011 30.6 5.3 87 1-90 203-295 (374)
376 3gaf_A 7-alpha-hydroxysteroid 41.6 56 0.0019 27.3 6.5 72 1-92 24-99 (256)
377 3f4w_A Putative hexulose 6 pho 41.6 57 0.0019 26.4 6.3 34 55-88 75-109 (211)
378 3v8b_A Putative dehydrogenase, 41.5 73 0.0025 27.1 7.3 72 1-92 40-115 (283)
379 4huj_A Uncharacterized protein 41.4 38 0.0013 27.9 5.3 82 1-92 34-116 (220)
380 1dos_A Aldolase class II; lyas 41.3 87 0.003 28.7 8.1 51 40-90 11-61 (358)
381 3ftp_A 3-oxoacyl-[acyl-carrier 41.2 61 0.0021 27.5 6.7 72 1-92 40-115 (270)
382 1fmc_A 7 alpha-hydroxysteroid 41.1 75 0.0026 25.9 7.1 72 1-92 23-98 (255)
383 3tpc_A Short chain alcohol deh 41.0 73 0.0025 26.4 7.1 72 1-93 19-92 (257)
384 1wma_A Carbonyl reductase [NAD 40.8 85 0.0029 25.7 7.5 72 1-92 16-92 (276)
385 3sc4_A Short chain dehydrogena 40.8 1.2E+02 0.0042 25.6 8.7 79 1-92 21-103 (285)
386 2rhc_B Actinorhodin polyketide 40.6 70 0.0024 27.0 7.0 72 1-92 34-109 (277)
387 4e6p_A Probable sorbitol dehyd 40.6 1.5E+02 0.0053 24.4 9.3 71 1-92 20-92 (259)
388 1usg_A Leucine-specific bindin 40.4 42 0.0014 28.6 5.6 52 44-96 180-232 (346)
389 1spx_A Short-chain reductase f 40.3 97 0.0033 25.9 7.9 73 1-93 18-97 (278)
390 3i4f_A 3-oxoacyl-[acyl-carrier 40.1 1.5E+02 0.0053 24.3 10.4 74 1-91 19-94 (264)
391 2jah_A Clavulanic acid dehydro 40.1 73 0.0025 26.4 6.9 72 1-92 19-94 (247)
392 3h7a_A Short chain dehydrogena 40.1 1.6E+02 0.0054 24.4 10.4 72 1-92 19-93 (252)
393 3c97_A Signal transduction his 39.9 42 0.0015 24.5 4.9 37 43-79 40-77 (140)
394 4fs3_A Enoyl-[acyl-carrier-pro 39.9 82 0.0028 26.4 7.3 75 1-92 20-96 (256)
395 4g81_D Putative hexonate dehyd 39.7 54 0.0018 28.2 6.1 72 1-92 21-96 (255)
396 2hmc_A AGR_L_411P, dihydrodipi 39.6 23 0.00077 32.2 3.8 24 72-95 82-105 (344)
397 3ozi_A L6TR; plant TIR domain, 39.6 95 0.0033 26.2 7.5 73 56-129 34-116 (204)
398 3uve_A Carveol dehydrogenase ( 39.4 1E+02 0.0035 25.9 7.9 88 1-92 23-114 (286)
399 3sc6_A DTDP-4-dehydrorhamnose 39.2 27 0.00091 29.4 4.0 72 1-90 17-106 (287)
400 3ijr_A Oxidoreductase, short c 39.0 1.2E+02 0.0041 25.8 8.4 73 1-92 59-135 (291)
401 1gee_A Glucose 1-dehydrogenase 38.9 82 0.0028 25.9 7.1 72 1-92 19-95 (261)
402 4dyv_A Short-chain dehydrogena 38.9 71 0.0024 27.1 6.8 71 1-92 40-112 (272)
403 2fn9_A Ribose ABC transporter, 38.8 1.6E+02 0.0056 24.1 10.6 39 50-88 51-89 (290)
404 2qjg_A Putative aldolase MJ040 38.8 1.1E+02 0.0037 25.9 8.0 54 70-124 133-197 (273)
405 3a28_C L-2.3-butanediol dehydr 38.8 83 0.0028 26.1 7.1 74 1-92 14-91 (258)
406 3l4b_C TRKA K+ channel protien 38.7 1.5E+02 0.0052 23.8 9.4 115 1-120 11-127 (218)
407 3d4o_A Dipicolinate synthase s 38.7 38 0.0013 29.4 5.0 105 1-118 166-272 (293)
408 3l6d_A Putative oxidoreductase 38.6 68 0.0023 27.8 6.8 81 1-92 20-104 (306)
409 3ai3_A NADPH-sorbose reductase 38.6 60 0.0021 27.0 6.2 72 1-92 19-95 (263)
410 2ae2_A Protein (tropinone redu 38.6 1.3E+02 0.0046 24.8 8.4 72 1-92 21-97 (260)
411 3lyl_A 3-oxoacyl-(acyl-carrier 38.3 1.6E+02 0.0055 23.9 11.2 73 1-93 17-93 (247)
412 3tb6_A Arabinose metabolism tr 38.3 1.6E+02 0.0056 24.0 10.7 41 50-90 64-107 (298)
413 4id9_A Short-chain dehydrogena 38.2 81 0.0028 27.1 7.2 73 1-84 31-119 (347)
414 1ae1_A Tropinone reductase-I; 38.2 90 0.0031 26.2 7.3 72 1-92 33-109 (273)
415 4dqx_A Probable oxidoreductase 38.2 83 0.0028 26.7 7.1 71 1-92 39-111 (277)
416 3pk0_A Short-chain dehydrogena 38.1 91 0.0031 26.0 7.3 72 1-92 22-98 (262)
417 3dzv_A 4-methyl-5-(beta-hydrox 38.0 46 0.0016 29.2 5.5 58 57-116 58-125 (273)
418 3s55_A Putative short-chain de 38.0 98 0.0033 26.0 7.5 84 1-92 22-109 (281)
419 1tx2_A DHPS, dihydropteroate s 38.0 57 0.002 29.0 6.1 49 61-113 118-167 (297)
420 3t7c_A Carveol dehydrogenase; 38.0 96 0.0033 26.5 7.6 84 1-92 40-127 (299)
421 3ipc_A ABC transporter, substr 37.9 61 0.0021 27.8 6.3 56 44-100 180-236 (356)
422 2y5s_A DHPS, dihydropteroate s 37.9 82 0.0028 27.9 7.1 50 60-113 99-148 (294)
423 3ksm_A ABC-type sugar transpor 37.7 1E+02 0.0035 25.1 7.4 40 50-89 51-91 (276)
424 2fp4_B Succinyl-COA ligase [GD 37.6 69 0.0024 29.5 6.9 65 56-120 316-387 (395)
425 3epr_A Hydrolase, haloacid deh 37.6 60 0.0021 26.9 6.0 49 70-118 25-79 (264)
426 2nu8_B SCS-beta, succinyl-COA 37.6 85 0.0029 28.8 7.5 66 56-121 309-381 (388)
427 3egc_A Putative ribose operon 37.5 1.2E+02 0.0042 25.0 8.0 40 50-91 57-96 (291)
428 3re1_A Uroporphyrinogen-III sy 37.4 1.6E+02 0.0056 24.8 8.9 56 56-118 192-253 (269)
429 3kvo_A Hydroxysteroid dehydrog 37.4 1.3E+02 0.0044 26.7 8.5 79 1-92 57-139 (346)
430 1iy8_A Levodione reductase; ox 37.1 66 0.0023 26.9 6.3 72 1-92 25-102 (267)
431 2h3h_A Sugar ABC transporter, 37.1 1.3E+02 0.0045 25.3 8.2 40 50-89 50-89 (313)
432 1cdo_A Alcohol dehydrogenase; 37.0 35 0.0012 30.4 4.7 32 57-89 262-295 (374)
433 2ep7_A GAPDH, glyceraldehyde-3 37.0 41 0.0014 30.7 5.1 81 1-84 13-115 (342)
434 3gem_A Short chain dehydrogena 36.9 60 0.0021 27.3 6.0 69 1-92 39-109 (260)
435 3ak4_A NADH-dependent quinucli 36.9 80 0.0027 26.2 6.7 71 1-92 24-96 (263)
436 3o74_A Fructose transport syst 36.9 1.5E+02 0.0052 24.0 8.4 41 50-91 51-91 (272)
437 4ibo_A Gluconate dehydrogenase 36.8 1.7E+02 0.0059 24.5 9.0 72 1-92 38-113 (271)
438 2cfc_A 2-(R)-hydroxypropyl-COM 36.8 76 0.0026 25.8 6.5 72 1-92 14-90 (250)
439 3afn_B Carbonyl reductase; alp 36.7 1.7E+02 0.0057 23.7 11.8 73 1-92 19-95 (258)
440 3c3w_A Two component transcrip 36.5 36 0.0012 27.6 4.4 52 45-96 35-89 (225)
441 2vp8_A Dihydropteroate synthas 36.5 68 0.0023 28.9 6.4 51 59-113 117-168 (318)
442 1jw9_B Molybdopterin biosynthe 36.1 47 0.0016 28.3 5.1 32 57-89 121-153 (249)
443 2q2v_A Beta-D-hydroxybutyrate 35.9 1.8E+02 0.0062 23.8 8.9 70 1-92 16-89 (255)
444 1ja9_A 4HNR, 1,3,6,8-tetrahydr 35.8 74 0.0025 26.3 6.3 73 1-92 33-109 (274)
445 3rkr_A Short chain oxidoreduct 35.7 1.9E+02 0.0064 23.9 10.3 72 1-92 41-116 (262)
446 2dri_A D-ribose-binding protei 35.7 59 0.002 26.8 5.7 39 50-88 50-88 (271)
447 1w6u_A 2,4-dienoyl-COA reducta 35.6 1.2E+02 0.0042 25.4 7.8 72 1-92 38-114 (302)
448 1gz6_A Estradiol 17 beta-dehyd 35.6 1.2E+02 0.0039 26.5 7.8 78 1-92 21-102 (319)
449 3ek2_A Enoyl-(acyl-carrier-pro 35.5 86 0.0029 25.9 6.7 73 1-92 28-102 (271)
450 1hdc_A 3-alpha, 20 beta-hydrox 35.4 66 0.0023 26.8 5.9 71 1-92 17-89 (254)
451 3sg0_A Extracellular ligand-bi 35.4 62 0.0021 27.9 5.9 57 44-101 201-258 (386)
452 3uog_A Alcohol dehydrogenase; 35.4 17 0.00057 32.5 2.2 19 1-19 201-219 (363)
453 3d0c_A Dihydrodipicolinate syn 35.3 68 0.0023 28.4 6.3 16 69-84 33-48 (314)
454 2prs_A High-affinity zinc upta 35.3 1.2E+02 0.0043 26.0 7.9 42 68-109 209-250 (284)
455 3pm6_A Putative fructose-bisph 35.2 1.2E+02 0.0043 27.1 7.9 67 49-115 18-96 (306)
456 1yxm_A Pecra, peroxisomal tran 35.1 1.7E+02 0.0058 24.6 8.7 32 61-92 77-110 (303)
457 3ksu_A 3-oxoacyl-acyl carrier 35.0 59 0.002 27.3 5.6 75 1-92 23-101 (262)
458 1vl8_A Gluconate 5-dehydrogena 34.9 1.1E+02 0.0037 25.7 7.3 72 1-92 33-109 (267)
459 3i6i_A Putative leucoanthocyan 34.9 1.8E+02 0.0063 24.9 9.0 71 1-92 22-93 (346)
460 3a1s_A Iron(II) transport prot 34.8 94 0.0032 26.3 6.9 73 57-129 83-165 (258)
461 3i09_A Periplasmic branched-ch 34.8 1.8E+02 0.0062 25.0 9.0 55 44-100 182-239 (375)
462 3sx2_A Putative 3-ketoacyl-(ac 34.8 98 0.0034 25.9 7.0 85 1-93 25-113 (278)
463 3t8y_A CHEB, chemotaxis respon 34.5 1.2E+02 0.004 22.9 6.9 47 44-90 58-106 (164)
464 1xkq_A Short-chain reductase f 34.5 72 0.0025 26.9 6.1 72 1-92 18-96 (280)
465 2z1n_A Dehydrogenase; reductas 34.4 1.9E+02 0.0066 23.7 10.2 72 1-92 19-95 (260)
466 3ew7_A LMO0794 protein; Q8Y8U8 34.3 91 0.0031 24.6 6.4 19 1-19 12-30 (221)
467 1g0o_A Trihydroxynaphthalene r 34.3 1.2E+02 0.0039 25.6 7.4 73 1-92 41-117 (283)
468 2f1k_A Prephenate dehydrogenas 34.2 1.2E+02 0.0042 25.3 7.6 91 1-102 11-103 (279)
469 3pi7_A NADH oxidoreductase; gr 34.2 83 0.0029 27.5 6.7 19 1-19 177-195 (349)
470 3ezl_A Acetoacetyl-COA reducta 34.2 1.9E+02 0.0065 23.6 10.9 73 1-92 25-101 (256)
471 2zat_A Dehydrogenase/reductase 34.2 1E+02 0.0036 25.4 7.0 72 1-92 26-101 (260)
472 3dii_A Short-chain dehydrogena 34.2 1.3E+02 0.0045 24.7 7.6 70 1-92 14-85 (247)
473 1gvf_A Tagatose-bisphosphate a 34.0 93 0.0032 27.5 6.8 29 62-90 22-50 (286)
474 1xhl_A Short-chain dehydrogena 34.0 66 0.0023 27.7 5.8 72 1-92 38-116 (297)
475 3lop_A Substrate binding perip 34.0 1.1E+02 0.0038 26.2 7.4 53 44-97 183-236 (364)
476 3e03_A Short chain dehydrogena 33.9 1.5E+02 0.0051 24.8 8.1 79 1-92 18-100 (274)
477 1qyc_A Phenylcoumaran benzylic 33.8 69 0.0024 26.9 5.9 83 1-87 16-110 (308)
478 2vc6_A MOSA, dihydrodipicolina 33.8 41 0.0014 29.5 4.4 15 81-95 68-82 (292)
479 4e21_A 6-phosphogluconate dehy 33.8 1.6E+02 0.0054 26.5 8.5 83 1-92 33-118 (358)
480 3gpi_A NAD-dependent epimerase 33.7 72 0.0024 26.7 5.9 20 1-20 14-33 (286)
481 4egf_A L-xylulose reductase; s 33.6 74 0.0025 26.7 6.0 72 1-92 32-108 (266)
482 2g82_O GAPDH, glyceraldehyde-3 33.6 79 0.0027 28.5 6.4 88 1-91 11-120 (331)
483 2pcq_A Putative dihydrodipicol 33.6 43 0.0015 29.2 4.5 23 72-95 53-75 (283)
484 2cvz_A Dehydrogenase, 3-hydrox 33.5 83 0.0028 26.4 6.3 21 1-23 12-32 (289)
485 1xq1_A Putative tropinone redu 33.4 1.5E+02 0.005 24.4 7.8 73 1-93 26-103 (266)
486 3e8x_A Putative NAD-dependent 33.3 1.8E+02 0.006 23.4 8.2 19 1-19 33-51 (236)
487 3ffs_A Inosine-5-monophosphate 33.3 59 0.002 30.2 5.6 52 51-103 150-204 (400)
488 3pym_A GAPDH 3, glyceraldehyde 33.3 1.6E+02 0.0055 26.6 8.4 81 1-84 12-115 (332)
489 2fzw_A Alcohol dehydrogenase c 33.3 34 0.0012 30.4 3.9 33 57-90 260-294 (373)
490 3m1a_A Putative dehydrogenase; 33.2 87 0.003 26.2 6.4 71 1-92 17-89 (281)
491 1aj0_A DHPS, dihydropteroate s 33.2 57 0.0019 28.8 5.3 50 60-113 92-141 (282)
492 3c1o_A Eugenol synthase; pheny 33.2 1.7E+02 0.0057 24.7 8.3 19 1-19 16-34 (321)
493 1e6u_A GDP-fucose synthetase; 33.2 1.1E+02 0.0038 25.8 7.1 70 1-87 15-103 (321)
494 3op4_A 3-oxoacyl-[acyl-carrier 33.1 2E+02 0.0069 23.6 9.5 71 1-92 21-93 (248)
495 2h7i_A Enoyl-[acyl-carrier-pro 33.1 1.2E+02 0.0039 25.4 7.2 73 1-93 21-98 (269)
496 3khj_A Inosine-5-monophosphate 33.0 70 0.0024 29.1 6.0 50 53-103 113-165 (361)
497 3can_A Pyruvate-formate lyase- 33.0 70 0.0024 25.1 5.4 37 67-103 17-54 (182)
498 3rxy_A NIF3 protein; structura 33.0 87 0.003 27.8 6.3 73 61-146 198-275 (278)
499 4ea9_A Perosamine N-acetyltran 32.9 1.7E+02 0.0058 23.7 8.0 73 2-84 24-97 (220)
500 2ehd_A Oxidoreductase, oxidore 32.9 1.2E+02 0.0042 24.3 7.1 70 1-92 17-88 (234)
No 1
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=100.00 E-value=4.1e-67 Score=478.89 Aligned_cols=239 Identities=20% Similarity=0.272 Sum_probs=208.4
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCC-ccccccc----cccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHH
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTE-EESGQKV----EVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGN 74 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~-~~~g~~~----~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~ 74 (264)
|||.+++.+. +++++|+++++..+ ...|+|+ +....+++++ +|++++++ .+| |+||||.|+++.+|
T Consensus 33 MGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~--~dl~~ll~-----~aD-VvIDFT~p~a~~~~ 104 (288)
T 3ijp_A 33 MGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRIT--DDPESAFS-----NTE-GILDFSQPQASVLY 104 (288)
T ss_dssp HHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCB--SCHHHHTT-----SCS-EEEECSCHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceee--CCHHHHhc-----CCC-EEEEcCCHHHHHHH
Confidence 8999999998 78999999998643 3566665 2334467775 58777653 689 89999999999999
Q ss_pred HHHHHhcCCCeEEecCCCCHHHHHHHHHccC-CcEEEccchhHHHHHHHHHHHHHHHhcCCCCCCCCEEEEeecCCCCCC
Q 024671 75 AELYSKVGVPFVMGTTGGDRVRLHETIENSN-VYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLD 153 (264)
Q Consensus 75 ~~~~~~~g~plViGTTG~~~~~~~~l~~~~~-~~~v~s~NfSlGv~ll~~~~~~aa~~l~~~~~~~dieI~E~HH~~K~D 153 (264)
+++|+++|+|+|+|||||+++++++|.++++ +|+|||||||+|+|+|++++++++++|+ ++||+||+|+||++|+|
T Consensus 105 ~~~~l~~Gv~vViGTTG~~~e~~~~L~~aa~~~~~~~a~N~SiGv~ll~~l~~~aa~~l~---~~~dieIiE~HH~~K~D 181 (288)
T 3ijp_A 105 ANYAAQKSLIHIIGTTGFSKTEEAQIADFAKYTTIVKSGNMSLGVNLLANLVKRAAKALD---DDFDIEIYEMHHANKVD 181 (288)
T ss_dssp HHHHHHHTCEEEECCCCCCHHHHHHHHHHHTTSEEEECSCCCHHHHHHHHHHHHHHHHSC---TTSEEEEEEEECTTCCC
T ss_pred HHHHHHcCCCEEEECCCCCHHHHHHHHHHhCcCCEEEECCCcHHHHHHHHHHHHHHHhcC---CCCCEEEEEccCCCCCC
Confidence 9999999999999999999988888887766 9999999999999999999999999997 68999999999999999
Q ss_pred C-cHHHHHHHHHHH-hcCCcc------CcchhhhccCcccccccccccCCCcCcceeEEEEEcCCCceEEEEEEEEecCc
Q 024671 154 T-SGTAKAVISCFQ-KLGVSF------DMDQIQMIRDPKQQLEMVGVPEEHLPGHAFHMYHLTSPDQTVSFEFQHNVCGR 225 (264)
Q Consensus 154 a-SGTAl~l~~~i~-~~~~~~------~~~~~~~~r~~~~~~~~~~~r~g~i~gha~H~v~f~~~~E~i~lei~H~a~sR 225 (264)
| ||||++|++.+. .+++.+ +|+.....|++ ++++++++|+|+++| +|+|+|++++|+| ||+|+|+||
T Consensus 182 aPSGTA~~la~~i~~~~~~~~~~~~~~~r~g~~g~r~~-~~i~i~s~R~g~ivg--~h~V~f~~~~e~i--~i~H~a~sR 256 (288)
T 3ijp_A 182 SPSGTALLLGQAAAEGRNIMLKNVSVNGRSGHTGKREK-GTIGFACSRGGTVIG--DHSITFAGENERI--VLSHIAQER 256 (288)
T ss_dssp SSCHHHHHHHHHHHHHTTSCHHHHEEECGGGCCSCCCT-TCEEEEEEECTTCCE--EEEEEEEETTEEE--EEEEEECCT
T ss_pred CCCHHHHHHHHHHHHHhCCCcccccccccccccCCcCC-CCccEEEEECCCCCE--EEEEEecCCCcEE--EEEEEeCcH
Confidence 9 999999999884 455543 33343444543 468999999999999 9999999999997 999999999
Q ss_pred ccchHHHHHHHHHHhhcccccCCCceeehhHHhhc
Q 024671 226 SIYAEGTVDAVLFLSKKVQLKADKRIYNMIDVLRE 260 (264)
Q Consensus 226 ~~FA~GAl~Aa~~l~~k~~~~~~~G~Y~m~dvl~~ 260 (264)
++||+||++||+|+.+| +||+|+|+|||+.
T Consensus 257 ~~Fa~Ga~~Aa~~l~~~-----~~g~y~m~dvL~~ 286 (288)
T 3ijp_A 257 SIFANGALKAALWAKNH-----ENGLYSMLDVLGL 286 (288)
T ss_dssp HHHHHHHHHHHHHHTTC-----CSEEECHHHHHCC
T ss_pred HHHHHHHHHHHHHHhcC-----CCcEEeHHHHhCc
Confidence 99999999999999999 9999999999975
No 2
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=100.00 E-value=8.6e-67 Score=460.54 Aligned_cols=202 Identities=25% Similarity=0.368 Sum_probs=183.3
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
|||+|++.+.+++++|++++++... ++ + ..+| |+||||+|+++++|+++|++
T Consensus 24 MG~~i~~~~~~~~~elv~~id~~~~------------------~~----l-----~~~D-VvIDFT~P~a~~~~~~~~~~ 75 (228)
T 1vm6_A 24 MGQEIQKVFSEKGHELVLKVDVNGV------------------EE----L-----DSPD-VVIDFSSPEALPKTVDLCKK 75 (228)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTEE------------------EE----C-----SCCS-EEEECSCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEEEcCCCc------------------cc----c-----cCCC-EEEECCCHHHHHHHHHHHHH
Confidence 8999998766899999999874320 11 2 1478 89999999999999999999
Q ss_pred cCCCeEEecCCCCHHHHHHHHHccC-CcEEEccchhHHHHHHHHHHHHHHHhcCCCCCCCCEEEEeecCCCCCCC-cHHH
Q 024671 81 VGVPFVMGTTGGDRVRLHETIENSN-VYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDT-SGTA 158 (264)
Q Consensus 81 ~g~plViGTTG~~~~~~~~l~~~~~-~~~v~s~NfSlGv~ll~~~~~~aa~~l~~~~~~~dieI~E~HH~~K~Da-SGTA 158 (264)
+|+|+|||||||++++++.+.+.++ +|+|||||||+|||+|++++++++++| ++|||||+|+||++|+|| ||||
T Consensus 76 ~g~~~ViGTTG~~~~~~~~l~~~a~~~~vv~apNfSlGvnll~~l~~~aA~~l----~~ydiEIiE~HH~~K~DAPSGTA 151 (228)
T 1vm6_A 76 YRAGLVLGTTALKEEHLQMLRELSKEVPVVQAYNFSIGINVLKRFLSELVKVL----EDWDVEIVETHHRFKKDAPSGTA 151 (228)
T ss_dssp HTCEEEECCCSCCHHHHHHHHHHTTTSEEEECSCCCHHHHHHHHHHHHHHHHT----TTSEEEEEEEECTTCCCSSCHHH
T ss_pred cCCCEEEeCCCCCHHHHHHHHHHHhhCCEEEeccccHHHHHHHHHHHHHHHhc----CCCCEEEEEcCCCCCCCCCCHHH
Confidence 9999999999999999888877765 999999999999999999999999998 489999999999999999 9999
Q ss_pred HHHHHHHHhcCCccCcchhhhccCcccccccccccCCCcCcceeEEEEEcCCCceEEEEEEEEecCcccchHHHHHHHHH
Q 024671 159 KAVISCFQKLGVSFDMDQIQMIRDPKQQLEMVGVPEEHLPGHAFHMYHLTSPDQTVSFEFQHNVCGRSIYAEGTVDAVLF 238 (264)
Q Consensus 159 l~l~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~r~g~i~gha~H~v~f~~~~E~i~lei~H~a~sR~~FA~GAl~Aa~~ 238 (264)
++|++.+. +.++++++|+|+++| +|+|+|++++|+| ||+|+|+||++||+||++||+|
T Consensus 152 l~lae~i~------------------~~I~i~svR~g~ivg--~H~V~F~~~gE~i--ei~H~a~sR~~Fa~Gal~Aa~~ 209 (228)
T 1vm6_A 152 ILLESALG------------------KSVPIHSLRVGGVPG--DHVVVFGNIGETI--EIKHRAISRTVFAIGALKAAEF 209 (228)
T ss_dssp HHHHHHTT------------------SCCCEEEEECTTCCC--EEEEEEECSSEEE--EEEEEECCTHHHHHHHHHHHHH
T ss_pred HHHHHhcc------------------cCCCEEEEECCCCcE--EEEEEEeCCCcEE--EEEEEeCcHHHhHhHHHHHHHH
Confidence 99999872 148999999999999 9999999999997 9999999999999999999999
Q ss_pred HhhcccccCCCceeehhHHhhcC
Q 024671 239 LSKKVQLKADKRIYNMIDVLREG 261 (264)
Q Consensus 239 l~~k~~~~~~~G~Y~m~dvl~~~ 261 (264)
+.+| +||+|+|+|||+++
T Consensus 210 l~~~-----~~G~Y~m~dvL~~g 227 (228)
T 1vm6_A 210 LVGK-----DPGMYSFEEVIFGG 227 (228)
T ss_dssp HTTC-----CSEEECHHHHHTC-
T ss_pred HhcC-----CCCEecHHHHhcCC
Confidence 9999 99999999999775
No 3
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=100.00 E-value=5.4e-66 Score=468.47 Aligned_cols=239 Identities=26% Similarity=0.383 Sum_probs=207.0
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCC-cccccccc-ccC--ceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHH
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTE-EESGQKVE-VCG--KEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNA 75 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~-~~~g~~~~-~~~--~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~ 75 (264)
|||.+++.+. +++++|++++++.+ ...|++++ +.+ .+++++ +|++++++ .+| |+||||.|+++.+++
T Consensus 19 MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~--~dl~~ll~-----~~D-VVIDfT~p~a~~~~~ 90 (272)
T 4f3y_A 19 MGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALT--DDIERVCA-----EAD-YLIDFTLPEGTLVHL 90 (272)
T ss_dssp HHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCB--CCHHHHHH-----HCS-EEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceec--CCHHHHhc-----CCC-EEEEcCCHHHHHHHH
Confidence 8999999997 78999999988643 34566642 111 155554 68877765 489 899999999999999
Q ss_pred HHHHhcCCCeEEecCCCCHHHHHHHHHccC-CcEEEccchhHHHHHHHHHHHHHHHhcCCCCCCCCEEEEeecCCCCCCC
Q 024671 76 ELYSKVGVPFVMGTTGGDRVRLHETIENSN-VYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDT 154 (264)
Q Consensus 76 ~~~~~~g~plViGTTG~~~~~~~~l~~~~~-~~~v~s~NfSlGv~ll~~~~~~aa~~l~~~~~~~dieI~E~HH~~K~Da 154 (264)
++|+++|+|+|+|||||+++++++|.++++ +|+|||||||+|+|+|++++++++++|+ ++||+||+|+||++|+||
T Consensus 91 ~~al~~G~~vVigTTG~s~~~~~~L~~aa~~~~vv~a~N~s~Gv~l~~~~~~~aa~~l~---~~~diei~E~HH~~K~Da 167 (272)
T 4f3y_A 91 DAALRHDVKLVIGTTGFSEPQKAQLRAAGEKIALVFSANMSVGVNVTMKLLEFAAKQFA---QGYDIEIIEAHHRHKVDA 167 (272)
T ss_dssp HHHHHHTCEEEECCCCCCHHHHHHHHHHTTTSEEEECSCCCHHHHHHHHHHHHHHHHTS---SSCEEEEEEEECTTCCSS
T ss_pred HHHHHcCCCEEEECCCCCHHHHHHHHHHhccCCEEEECCCCHHHHHHHHHHHHHHHhcC---cCCCEEEEEecCCCCCCC
Confidence 999999999999999999999988988876 8999999999999999999999999997 689999999999999999
Q ss_pred -cHHHHHHHHHHHh-cCCcc------CcchhhhccCcccccccccccCCCcCcceeEEEEEcCCCceEEEEEEEEecCcc
Q 024671 155 -SGTAKAVISCFQK-LGVSF------DMDQIQMIRDPKQQLEMVGVPEEHLPGHAFHMYHLTSPDQTVSFEFQHNVCGRS 226 (264)
Q Consensus 155 -SGTAl~l~~~i~~-~~~~~------~~~~~~~~r~~~~~~~~~~~r~g~i~gha~H~v~f~~~~E~i~lei~H~a~sR~ 226 (264)
||||++|++.+.+ +++.+ +|+.+...|++ +.++++++|+|+++| +|+|+|++++|+| ||+|+|+||+
T Consensus 168 PSGTA~~la~~i~~~~~~~~~~~~~~~r~g~~g~r~~-~~i~i~s~R~g~ivg--~h~v~f~~~~e~i--~i~H~a~~R~ 242 (272)
T 4f3y_A 168 PSGTALMMGETIAAATGRSLDDCAVYGRHGVTGERDP-STIGFSAIRGGDIVG--DHTVLFAGIGERI--EITHKSASRV 242 (272)
T ss_dssp SCHHHHHHHHHHHHTTTCCHHHHEEECCCSCCCSCCT-TCEEEEEEECTTCCE--EEEEEEECSSEEE--EEEEEECCTH
T ss_pred CCHHHHHHHHHHHHHhCcccccccccccccccCCCCC-CccCEEEEECCCCce--EEEEEEcCCCcEE--EEEEEeCcHH
Confidence 9999999998854 55432 33444445654 468999999999999 9999999999997 9999999999
Q ss_pred cchHHHHHHHHHHhhcccccCCCceeehhHHhhc
Q 024671 227 IYAEGTVDAVLFLSKKVQLKADKRIYNMIDVLRE 260 (264)
Q Consensus 227 ~FA~GAl~Aa~~l~~k~~~~~~~G~Y~m~dvl~~ 260 (264)
+||+||++||+|+.+| +||+|+|+|||+.
T Consensus 243 ~fa~Ga~~Aa~~~~~~-----~~g~y~m~dvl~~ 271 (272)
T 4f3y_A 243 SYAQGALRAARFLAGR-----DAGFFDMQDVLGL 271 (272)
T ss_dssp HHHHHHHHHHHHHHTC-----SSEEECHHHHTTC
T ss_pred HHHHHHHHHHHHHhcC-----CCcEEcHHHHhCC
Confidence 9999999999999999 9999999999974
No 4
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=2.1e-63 Score=444.89 Aligned_cols=223 Identities=21% Similarity=0.323 Sum_probs=191.2
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHH
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (264)
|||.+++.+. +++ +|+++++..+.. ..+++++ +|+++++ .+| |+||||.|+++.++++ +
T Consensus 14 MG~~i~~~l~~~~~-eLva~~d~~~~~--------~~gv~v~--~dl~~l~------~~D-VvIDft~p~a~~~~~~--l 73 (243)
T 3qy9_A 14 MNQRVARLAEEKGH-EIVGVIENTPKA--------TTPYQQY--QHIADVK------GAD-VAIDFSNPNLLFPLLD--E 73 (243)
T ss_dssp HHHHHHHHHHHTTC-EEEEEECSSCC----------CCSCBC--SCTTTCT------TCS-EEEECSCHHHHHHHHT--S
T ss_pred HHHHHHHHHHhCCC-EEEEEEecCccc--------cCCCcee--CCHHHHh------CCC-EEEEeCChHHHHHHHH--H
Confidence 8999999998 456 999988854321 1234453 4554432 589 8999999999999998 8
Q ss_pred hcCCCeEEecCCCCHHHHHHHHHccC-CcEEEccchhHHHHHHHHHHHHHHHhcCCCCCCCCEEEEeecCCCCCCC-cHH
Q 024671 80 KVGVPFVMGTTGGDRVRLHETIENSN-VYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDT-SGT 157 (264)
Q Consensus 80 ~~g~plViGTTG~~~~~~~~l~~~~~-~~~v~s~NfSlGv~ll~~~~~~aa~~l~~~~~~~dieI~E~HH~~K~Da-SGT 157 (264)
++|+|+|+|||||++++++++.++++ +|+|||||||+|||+|++++++++++|+ +||+||+|+||++|+|| |||
T Consensus 74 ~~g~~vVigTTG~s~e~~~~l~~aa~~~~v~~a~N~S~Gv~l~~~~~~~aa~~l~----~~dieI~E~HH~~K~DaPSGT 149 (243)
T 3qy9_A 74 DFHLPLVVATTGEKEKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLLD----DFDIELTEAHHNKKVDAPSGT 149 (243)
T ss_dssp CCCCCEEECCCSSHHHHHHHHHHHTTTSEEEECSSCCHHHHHHHHHHHHHHHHTT----TSEEEEEEEECTTCCSSSCHH
T ss_pred hcCCceEeCCCCCCHHHHHHHHHHHhcCCEEEECCccHHHHHHHHHHHHHHHhcC----CCCEEEEEcCCCCCCCCCCHH
Confidence 99999999999999989988888877 9999999999999999999999999996 49999999999999999 999
Q ss_pred HHHHHHHHHhcCCc----cCcchhhhccCcccccccccccCCCcCcceeEEEEEcCCCceEEEEEEEEecCcccchHHHH
Q 024671 158 AKAVISCFQKLGVS----FDMDQIQMIRDPKQQLEMVGVPEEHLPGHAFHMYHLTSPDQTVSFEFQHNVCGRSIYAEGTV 233 (264)
Q Consensus 158 Al~l~~~i~~~~~~----~~~~~~~~~r~~~~~~~~~~~r~g~i~gha~H~v~f~~~~E~i~lei~H~a~sR~~FA~GAl 233 (264)
|++|++.++.++.. ++|+.....|+. ++++++++|+|+++| +|+|+|++++|+| ||+|+|+||++||+||+
T Consensus 150 A~~la~~i~~~~~~~~~~~~r~~~~~~r~~-~~i~i~s~R~g~ivg--~h~v~f~~~~e~i--~i~H~a~sR~~Fa~Ga~ 224 (243)
T 3qy9_A 150 LEKLYDVIVSLKENVTPVYDRHELNEKRQP-QDIGIHSIRGGTIVG--EHEVLFAGTDETI--QITHRAQSKDIFANGAI 224 (243)
T ss_dssp HHHHHHHHHHHSTTCEEECCCTTTCCCCCT-TEEEEEEEECTTCCE--EEEEEEEETTEEE--EEEEEESCTHHHHHHHH
T ss_pred HHHHHHHHHhcCcccccccccccccCCccC-CcceEEEEECCCCcE--EEEEEEcCCCcEE--EEEEEeCcHHHHHHHHH
Confidence 99999988555543 233443445543 468999999999999 9999999999997 99999999999999999
Q ss_pred HHHHHHhhcccccCCCceeehhHH
Q 024671 234 DAVLFLSKKVQLKADKRIYNMIDV 257 (264)
Q Consensus 234 ~Aa~~l~~k~~~~~~~G~Y~m~dv 257 (264)
+||+|+.+| +||+|+|+||
T Consensus 225 ~Aa~~l~~~-----~~g~y~m~dv 243 (243)
T 3qy9_A 225 QAAERLVNK-----PNGFYTFDNL 243 (243)
T ss_dssp HHHHHHTTS-----CSEEECTTTC
T ss_pred HHHHHHccC-----CCcEeccccC
Confidence 999999999 9999999996
No 5
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=100.00 E-value=8.7e-62 Score=440.76 Aligned_cols=240 Identities=23% Similarity=0.319 Sum_probs=203.0
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCC-ccccccc----cccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHH
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTE-EESGQKV----EVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGN 74 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~-~~~g~~~----~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~ 74 (264)
||+.+++.+. .++++|+++++..+ ...|+++ ++...++++. +|++++++ .+| ||||||.|+++.++
T Consensus 17 mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~--~dl~~~l~-----~~D-vVIDft~p~~~~~~ 88 (273)
T 1dih_A 17 MGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQ--SSLDAVKD-----DFD-VFIDFTRPEGTLNH 88 (273)
T ss_dssp HHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEE--SCSTTTTT-----SCS-EEEECSCHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceec--CCHHHHhc-----CCC-EEEEcCChHHHHHH
Confidence 8999999887 78999999888543 2234443 3333345553 46655542 578 89999999999999
Q ss_pred HHHHHhcCCCeEEecCCCCHHHHHHHHHccC-CcEEEccchhHHHHHHHHHHHHHHHhcCCCCCCCCEEEEeecCCCCCC
Q 024671 75 AELYSKVGVPFVMGTTGGDRVRLHETIENSN-VYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLD 153 (264)
Q Consensus 75 ~~~~~~~g~plViGTTG~~~~~~~~l~~~~~-~~~v~s~NfSlGv~ll~~~~~~aa~~l~~~~~~~dieI~E~HH~~K~D 153 (264)
+++|+++|+|+|+|||||++++.+++.++++ +|+++|||||+|+|+|++++++++++|+ ++|||||+|+||++|+|
T Consensus 89 ~~~a~~~G~~vVigTtG~~~e~~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~~~~---~~~dieiiE~Hh~~K~D 165 (273)
T 1dih_A 89 LAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMG---DYTDIEIIEAHHRHKVD 165 (273)
T ss_dssp HHHHHHTTCEEEECCCCCCHHHHHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHHHHHT---TTSEEEEEEEECTTCCS
T ss_pred HHHHHhCCCCEEEECCCCCHHHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHHHhcC---CCCCEEEEEeecCCCCC
Confidence 9999999999999999999998888887765 8999999999999999999999999997 68999999999999999
Q ss_pred C-cHHHHHHHHHHH-hcCCcc------CcchhhhccCcccccccccccCCCcCcceeEEEEEcCCCceEEEEEEEEecCc
Q 024671 154 T-SGTAKAVISCFQ-KLGVSF------DMDQIQMIRDPKQQLEMVGVPEEHLPGHAFHMYHLTSPDQTVSFEFQHNVCGR 225 (264)
Q Consensus 154 a-SGTAl~l~~~i~-~~~~~~------~~~~~~~~r~~~~~~~~~~~r~g~i~gha~H~v~f~~~~E~i~lei~H~a~sR 225 (264)
+ ||||+++++.+. .++..+ .|+.+...|.. +.++++++|+|+++| +|+|+|++++|+| ||+|+|+||
T Consensus 166 aPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~-~~i~i~s~R~g~vvg--~h~v~f~~~ge~i--~i~H~a~~R 240 (273)
T 1dih_A 166 APSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVP-GTIGFATVRAGDIVG--EHTAMFADIGERL--EITHKASSR 240 (273)
T ss_dssp SSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCT-TCEEEEEEECTTCCE--EEEEEEEETTEEE--EEEEEECST
T ss_pred CCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCC-CcceEEEEeCCCCCc--cEEEEEcCCCcEE--EEEEEeCCH
Confidence 9 999999999885 455432 23333334433 468999999999999 9999999999997 999999999
Q ss_pred ccchHHHHHHHHHHhhcccccCCCceeehhHHhhcC
Q 024671 226 SIYAEGTVDAVLFLSKKVQLKADKRIYNMIDVLREG 261 (264)
Q Consensus 226 ~~FA~GAl~Aa~~l~~k~~~~~~~G~Y~m~dvl~~~ 261 (264)
++||+||++||+|+.+| +||+|+|+|||+..
T Consensus 241 ~~fa~Ga~~Aa~~l~~~-----~~g~y~m~dvl~l~ 271 (273)
T 1dih_A 241 MTFANGAVRSALWLSGK-----ESGLFDMRDVLDLN 271 (273)
T ss_dssp HHHHHHHHHHHHHHTTC-----CSSEECHHHHTTGG
T ss_pred HHHHHHHHHHHHHHhcC-----CCCEEcHHHhhCCC
Confidence 99999999999999999 99999999999753
No 6
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=100.00 E-value=1.8e-60 Score=426.30 Aligned_cols=219 Identities=21% Similarity=0.266 Sum_probs=184.1
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHH
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (264)
|||.+++.+. +++++|+++++.. +|+++.+. ..+| |+||||+|+++.+++++|.
T Consensus 12 mG~~i~~~~~~~~~~elva~~d~~--------------------~dl~~~~~----~~~D-vvIDfT~p~a~~~~~~~a~ 66 (245)
T 1p9l_A 12 VGTTMVRAVAAADDLTLSAELDAG--------------------DPLSLLTD----GNTE-VVIDFTHPDVVMGNLEFLI 66 (245)
T ss_dssp HHHHHHHHHHHCTTCEEEEEECTT--------------------CCTHHHHH----TTCC-EEEECSCTTTHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCEEEEEEccC--------------------CCHHHHhc----cCCc-EEEEccChHHHHHHHHHHH
Confidence 8999999987 5799999987642 23443332 2589 8999999999999999999
Q ss_pred hcCCCeEEecCCCCHHHHHHH---HHcc-CCcEEEccchhHHHHHHHHHHHHHHHhcCCCCCCCCEEEEeecCCCCCCC-
Q 024671 80 KVGVPFVMGTTGGDRVRLHET---IENS-NVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDT- 154 (264)
Q Consensus 80 ~~g~plViGTTG~~~~~~~~l---~~~~-~~~~v~s~NfSlGv~ll~~~~~~aa~~l~~~~~~~dieI~E~HH~~K~Da- 154 (264)
++|+|+|+|||||++++++.+ ++++ ++|++++||||+|+|+|++++++++++|+ ||||+|+||++|+||
T Consensus 67 ~~g~~~VigTTG~~~e~~~~l~~aa~~~~~~~vv~a~N~siGv~ll~~l~~~aa~~~~------dieIiE~HH~~K~DaP 140 (245)
T 1p9l_A 67 DNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARFFD------SAEVIELHHPHKADAP 140 (245)
T ss_dssp HTTCEEEECCCCCCHHHHHHHHHHHHTSTTCEEEECSCCCHHHHHHHHHHHHHGGGCS------EEEEEEEECTTCCSSS
T ss_pred HcCCCEEEcCCCCCHHHHHHHHHHHHhCCCCCEEEECCccHHHHHHHHHHHHHHhhcC------CEEEEECcccCCCCCC
Confidence 999999999999998876665 4435 68999999999999999999999999883 999999999999999
Q ss_pred cHHHHHHHHHHHh-cC-Cc----cCcchhhhccCcc-cccccccccCCCcCcceeEEEEEcCCCceEEEEEEEEecCccc
Q 024671 155 SGTAKAVISCFQK-LG-VS----FDMDQIQMIRDPK-QQLEMVGVPEEHLPGHAFHMYHLTSPDQTVSFEFQHNVCGRSI 227 (264)
Q Consensus 155 SGTAl~l~~~i~~-~~-~~----~~~~~~~~~r~~~-~~~~~~~~r~g~i~gha~H~v~f~~~~E~i~lei~H~a~sR~~ 227 (264)
||||++|++.+.+ ++ .. ..++.....|.+. +.++++++|+|+++| +|+|+|++++|+| ||+|+|+||++
T Consensus 141 SGTA~~lae~i~~~~~~~~~~~~~~~~~~~g~r~~~~~~i~i~s~R~g~ivg--~h~V~f~~~~e~i--~i~H~a~sR~~ 216 (245)
T 1p9l_A 141 SGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVA--HQEVLFGTEGETL--TIRHDSLDRTS 216 (245)
T ss_dssp CHHHHHHHHHHHHHTTTSCCCCCCCCSCCTTTTCEEETTEEEEEEECTTCCE--EEEEEEEETTEEE--EEEEEECSGGG
T ss_pred CHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCcceEEEEECCCCCe--EEEEEEcCCCcEE--EEEEEeCchhh
Confidence 9999999998854 33 11 1111222234322 468999999999999 9999999999997 99999999999
Q ss_pred chHHHHHHHHHHhhcccccCCCc-eeehhHHhhc
Q 024671 228 YAEGTVDAVLFLSKKVQLKADKR-IYNMIDVLRE 260 (264)
Q Consensus 228 FA~GAl~Aa~~l~~k~~~~~~~G-~Y~m~dvl~~ 260 (264)
||+||++||+|+.+ +|| +|+|+|||+.
T Consensus 217 Fa~Ga~~Aa~~l~~------~~Gl~y~m~dvl~l 244 (245)
T 1p9l_A 217 FVPGVLLAVRRIAE------RPGLTVGLEPLLDL 244 (245)
T ss_dssp GHHHHHHHHHHGGG------SCEEEESSHHHHSC
T ss_pred hHHHHHHHHHHHhc------CCCCEEcHHHhhCC
Confidence 99999999999994 589 6999999975
No 7
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=99.00 E-value=6.7e-11 Score=108.42 Aligned_cols=143 Identities=10% Similarity=-0.015 Sum_probs=95.9
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHH
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (264)
||+.+++.+. .++++|+++++..... .+. .+++++ +|+++.+ ..+| +||++|.|....+++..|+
T Consensus 14 mG~~~~~~l~~~~~~elvav~d~~~~~---~~~---~gv~~~--~d~~~ll-----~~~D-vViiatp~~~h~~~~~~al 79 (320)
T 1f06_A 14 LGRSVEKLIAKQPDMDLVGIFSRRATL---DTK---TPVFDV--ADVDKHA-----DDVD-VLFLCMGSATDIPEQAPKF 79 (320)
T ss_dssp HHHHHHHHHTTCSSEEEEEEEESSSCC---SSS---SCEEEG--GGGGGTT-----TTCS-EEEECSCTTTHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCEEEEEEcCCHHH---hhc---CCCcee--CCHHHHh-----cCCC-EEEEcCCcHHHHHHHHHHH
Confidence 7999998887 4689999988854321 111 234443 4554433 3688 8999999999999999999
Q ss_pred hcCCCeEEecCC-CCHHHH-HH---HHHccCCcEEEccchhHHHHHHHHHHHHHHHhcCCCCCCCCEEEEeecCCCCCCC
Q 024671 80 KVGVPFVMGTTG-GDRVRL-HE---TIENSNVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDT 154 (264)
Q Consensus 80 ~~g~plViGTTG-~~~~~~-~~---l~~~~~~~~v~s~NfSlGv~ll~~~~~~aa~~l~~~~~~~dieI~E~HH~~K~Da 154 (264)
+.|+++|+.++. .+.++. ++ ++++.+...++..||+-|++.+.+++..........+ -+..+..|.||..+.+.
T Consensus 80 ~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~~v~v~~~~~~p~~~~l~~~l~~~~~~~g~~~-~~~~~~~~~~~~~~~~~ 158 (320)
T 1f06_A 80 AQFACTVDTYDNHRDIPRHRQVMNEAATAAGNVALVSTGWDPGMFSINRVYAAAVLAEHQQH-TFWGPGLSQGHSDALRR 158 (320)
T ss_dssp TTTSEEECCCCCGGGHHHHHHHHHHHHHHHTCEEECSCSBTTBHHHHHHHHHHHHCSSEEEE-EEECSEECHHHHHHHHT
T ss_pred HCCCEEEECCCCcCCHHHHHHHHHHHHHhCCCEEEEecCChHHHHHHHHHHhhcccccccee-cccCCCcccccccchhh
Confidence 999999999985 454444 44 4444443445555999999888887765332111000 01236788999999988
Q ss_pred -cHHH
Q 024671 155 -SGTA 158 (264)
Q Consensus 155 -SGTA 158 (264)
+|++
T Consensus 159 ~~gi~ 163 (320)
T 1f06_A 159 IPGVQ 163 (320)
T ss_dssp STTCS
T ss_pred cCchh
Confidence 8853
No 8
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=98.85 E-value=4e-09 Score=96.08 Aligned_cols=105 Identities=17% Similarity=0.104 Sum_probs=76.7
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCC-CCEEEEECCChHHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKY-PNMIVVDYTVPAAVNGNAELYS 79 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~-~d~VvIDFS~p~~~~~~~~~~~ 79 (264)
||+.+.+.+.+.|+++++.+.+.. .|+.+ .|++++. +++++.+. .. +| ++|+|+.|+.+.++++.|.
T Consensus 25 ~G~~~~~~l~~~g~~~v~~VnP~~--~g~~i----~G~~vy~--sl~el~~~---~~~~D-vaIi~vp~~~~~~~v~ea~ 92 (297)
T 2yv2_A 25 EGSFHAKAMLEYGTKVVAGVTPGK--GGSEV----HGVPVYD--SVKEALAE---HPEIN-TSIVFVPAPFAPDAVYEAV 92 (297)
T ss_dssp HHHHHHHHHHHHTCEEEEEECTTC--TTCEE----TTEEEES--SHHHHHHH---CTTCC-EEEECCCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEeCCCC--CCceE----CCEeeeC--CHHHHhhc---CCCCC-EEEEecCHHHHHHHHHHHH
Confidence 688899888777899887776432 12221 2577774 55554321 13 88 8999999999999999999
Q ss_pred hcCCC-eEEecCCCCHHHHHHHHHccC-CcE-EEccchhHHH
Q 024671 80 KVGVP-FVMGTTGGDRVRLHETIENSN-VYA-VISPQMGKQV 118 (264)
Q Consensus 80 ~~g~p-lViGTTG~~~~~~~~l~~~~~-~~~-v~s~NfSlGv 118 (264)
+.|++ +|+.||||++++.+++.+.++ .++ ++.|| ++|+
T Consensus 93 ~~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~viGPN-c~Gi 133 (297)
T 2yv2_A 93 DAGIRLVVVITEGIPVHDTMRFVNYARQKGATIIGPN-CPGA 133 (297)
T ss_dssp HTTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEECSS-SCEE
T ss_pred HCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEcCC-CCee
Confidence 99999 888999999876666655443 444 88999 7775
No 9
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=98.85 E-value=5.1e-09 Score=94.99 Aligned_cols=105 Identities=15% Similarity=0.153 Sum_probs=77.5
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
||+.+++.+.+.|+++++.+.+.. .|+. -.|++++. +++++.+ +..+| ++|+|+.|+.+.++++.|.+
T Consensus 19 ~G~~~~~~l~~~g~~~v~~VnP~~--~g~~----i~G~~vy~--sl~el~~---~~~~D-v~Ii~vp~~~~~~~~~ea~~ 86 (288)
T 1oi7_A 19 EGQFHTKQMLTYGTKIVAGVTPGK--GGME----VLGVPVYD--TVKEAVA---HHEVD-ASIIFVPAPAAADAALEAAH 86 (288)
T ss_dssp HHHHHHHHHHHHTCEEEEEECTTC--TTCE----ETTEEEES--SHHHHHH---HSCCS-EEEECCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCeEEEEECCCC--CCce----ECCEEeeC--CHHHHhh---cCCCC-EEEEecCHHHHHHHHHHHHH
Confidence 688999988777999887776432 1221 12577764 5555433 12589 89999999999999999999
Q ss_pred cCCC-eEEecCCCCHHHHHHHHHccC-CcE-EEccchhHHH
Q 024671 81 VGVP-FVMGTTGGDRVRLHETIENSN-VYA-VISPQMGKQV 118 (264)
Q Consensus 81 ~g~p-lViGTTG~~~~~~~~l~~~~~-~~~-v~s~NfSlGv 118 (264)
.|++ +|+.||||+.++.+++.+.++ .++ ++.|| ++|+
T Consensus 87 ~Gi~~vVi~t~G~~~~~~~~l~~~a~~~gi~vigPN-c~Gi 126 (288)
T 1oi7_A 87 AGIPLIVLITEGIPTLDMVRAVEEIKALGSRLIGGN-CPGI 126 (288)
T ss_dssp TTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEEESS-SCEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEeCC-CCeE
Confidence 9999 888999999876666555443 444 88999 7775
No 10
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=98.83 E-value=7.3e-09 Score=94.22 Aligned_cols=105 Identities=16% Similarity=0.118 Sum_probs=77.5
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
||+.+.+.+.+.|+++++.+++.. .|+.+ .|++++. +++++.++ ..+| ++|+|+.|+.+.++++.|.+
T Consensus 25 ~G~~~~~~l~~~g~~~V~~VnP~~--~g~~i----~G~~vy~--sl~el~~~---~~~D-v~ii~vp~~~~~~~v~ea~~ 92 (294)
T 2yv1_A 25 QGSFHTKKMLECGTKIVGGVTPGK--GGQNV----HGVPVFD--TVKEAVKE---TDAN-ASVIFVPAPFAKDAVFEAID 92 (294)
T ss_dssp HHHHHHHHHHHTTCCEEEEECTTC--TTCEE----TTEEEES--SHHHHHHH---HCCC-EEEECCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEEEeCCCC--CCceE----CCEeeeC--CHHHHhhc---CCCC-EEEEccCHHHHHHHHHHHHH
Confidence 688899888877999887776432 12221 2577764 56555431 2589 89999999999999999999
Q ss_pred cCCC-eEEecCCCCHHHHHHHHHccC-CcE-EEccchhHHH
Q 024671 81 VGVP-FVMGTTGGDRVRLHETIENSN-VYA-VISPQMGKQV 118 (264)
Q Consensus 81 ~g~p-lViGTTG~~~~~~~~l~~~~~-~~~-v~s~NfSlGv 118 (264)
.|++ +|+.|+|+++++.+++.+.++ .++ ++.|| ++|+
T Consensus 93 ~Gi~~vVi~t~G~~~~~~~~l~~~A~~~gi~viGPN-c~Gi 132 (294)
T 2yv1_A 93 AGIELIVVITEHIPVHDTMEFVNYAEDVGVKIIGPN-TPGI 132 (294)
T ss_dssp TTCSEEEECCSCCCHHHHHHHHHHHHHHTCEEECSS-CCEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEcCC-Ccee
Confidence 9999 788999999876666655543 444 88999 7775
No 11
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=98.43 E-value=7.1e-07 Score=80.71 Aligned_cols=105 Identities=15% Similarity=0.094 Sum_probs=75.0
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
||+.+++.+.+.++++++.+++.. .|+. ..|++++. +++++.++ ..+| ++|+|+.|+...+.++.|.+
T Consensus 19 ~G~~~~~~l~~~g~~~V~~V~p~~--~g~~----~~G~~vy~--sl~el~~~---~~~D-~viI~tP~~~~~~~~~ea~~ 86 (288)
T 2nu8_A 19 QGTFHSEQAIAYGTKMVGGVTPGK--GGTT----HLGLPVFN--TVREAVAA---TGAT-ASVIYVPAPFCKDSILEAID 86 (288)
T ss_dssp HHHHHHHHHHHHTCEEEEEECTTC--TTCE----ETTEEEES--SHHHHHHH---HCCC-EEEECCCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEEEeCCCc--ccce----eCCeeccC--CHHHHhhc---CCCC-EEEEecCHHHHHHHHHHHHH
Confidence 688899888766899887776531 1111 12467763 56655432 2588 89999999999999999999
Q ss_pred cCCCe-EEecCCCCHHHHHHHHHccC-Cc-EEEccchhHHH
Q 024671 81 VGVPF-VMGTTGGDRVRLHETIENSN-VY-AVISPQMGKQV 118 (264)
Q Consensus 81 ~g~pl-ViGTTG~~~~~~~~l~~~~~-~~-~v~s~NfSlGv 118 (264)
.|+++ |+.|+|++.++.+++.+.++ .+ .++.|| ++|+
T Consensus 87 ~Gi~~iVi~t~G~~~~~~~~l~~~A~~~gv~liGPN-c~Gi 126 (288)
T 2nu8_A 87 AGIKLIITITEGIPTLDMLTVKVKLDEAGVRMIGPN-TPGV 126 (288)
T ss_dssp TTCSEEEECCCCCCHHHHHHHHHHHHHHTCEEECSS-CCEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEecC-Ccce
Confidence 99995 88999998876555544433 33 378999 5553
No 12
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.18 E-value=7.9e-06 Score=70.92 Aligned_cols=125 Identities=17% Similarity=0.182 Sum_probs=88.7
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
||+.+++.+.+++++|+++.+.... . + . . .+++++.++ ..+| +||+++.|+...+++..|++
T Consensus 11 mG~~~~~~l~~~g~~lv~v~d~~~~-~-~-----~----~--~~~~~~l~~----~~~D-vVv~~~~~~~~~~~~~~~l~ 72 (236)
T 2dc1_A 11 IGKFLAEWLERNGFEIAAILDVRGE-H-E-----K----M--VRGIDEFLQ----REMD-VAVEAASQQAVKDYAEKILK 72 (236)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSCC-C-T-----T----E--ESSHHHHTT----SCCS-EEEECSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEEEecCcc-h-h-----h----h--cCCHHHHhc----CCCC-EEEECCCHHHHHHHHHHHHH
Confidence 7899998877889999887764421 1 0 0 1 135554442 3578 89999999999999999999
Q ss_pred cCCCeEEecCCCC--H---HHHHHHHHccCCcEEEccchhHHHHHHHHHHHHHHHhcCCCCCCCCEEEEeecCCCCCC
Q 024671 81 VGVPFVMGTTGGD--R---VRLHETIENSNVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLD 153 (264)
Q Consensus 81 ~g~plViGTTG~~--~---~~~~~l~~~~~~~~v~s~NfSlGv~ll~~~~~~aa~~l~~~~~~~dieI~E~HH~~K~D 153 (264)
.|+++|+.+|+.. + +++.+++++.+..+++.+|++-|+..+.. .. +. ...+.+.+.+|..+.+
T Consensus 73 ~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~i~~~~~g~~~~~~~-----~~-~~----~~~~~~~~~~~~~~~~ 140 (236)
T 2dc1_A 73 AGIDLIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGAIGGLDAIFS-----AS-EL----IEEIVLTTRKNWRQFG 140 (236)
T ss_dssp TTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTTCSCHHHHHH-----TG-GG----EEEEEEEEEEEGGGTT
T ss_pred CCCcEEEECcccCChHHHHHHHHHHHHhcCCeEEecCccccChHHHHH-----hh-cc----ccEEEEEEEcChHHcC
Confidence 9999999999973 2 34555566667788899999999765432 11 11 2256777778876665
No 13
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=97.97 E-value=3.2e-05 Score=71.57 Aligned_cols=107 Identities=10% Similarity=0.104 Sum_probs=67.7
Q ss_pred hHHHHHHHH-h-----CCCeEEEEEcCCCccccccc--cccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHH
Q 024671 2 GKAVIKAAD-A-----AGLELVPVSFGTEEESGQKV--EVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNG 73 (264)
Q Consensus 2 G~~i~~~~~-~-----~~~eLv~~~~~~~~~~g~~~--~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~ 73 (264)
||++.+.+. . ++.++|+++++....-|+++ +....++|+++ +++++... ...+| ++|+|+.|..+.+
T Consensus 20 Gk~~~~ml~~~~~~~r~~~~vVagV~P~~~g~~~~v~~G~~~~Gvpvy~--sv~ea~~~--~p~~D-laVi~vp~~~a~~ 94 (334)
T 3mwd_B 20 TRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIPVFK--NMADAMRK--HPEVD-VLINFASLRSAYD 94 (334)
T ss_dssp HHHHHHHHHHHHHTTCSSCSEEEEECTTSCSEEEEEEETTEEEEEEEES--SHHHHHHH--CTTCC-EEEECCCTTTHHH
T ss_pred hHHHHHHHHhcccccCCCceEEEEEcCCCCCccceEeccCccCCceeeC--CHHHHhhc--CCCCc-EEEEecCHHHHHH
Confidence 555544443 2 67999999985432112333 33334788875 66665432 01468 8999999988876
Q ss_pred HHHHHHh-cCCCeEEe-cCCCCHHHHHHHHHccC--CcEEEccc
Q 024671 74 NAELYSK-VGVPFVMG-TTGGDRVRLHETIENSN--VYAVISPQ 113 (264)
Q Consensus 74 ~~~~~~~-~g~plViG-TTG~~~~~~~~l~~~~~--~~~v~s~N 113 (264)
.+..++. .|++.|++ |+||.+++.+++.+.++ -.-++-||
T Consensus 95 ai~ea~~~~Gv~~vViiT~G~~e~~~~~l~~~a~~~g~rliGPN 138 (334)
T 3mwd_B 95 STMETMNYAQIRTIAIIAEGIPEALTRKLIKKADQKGVTIIGPA 138 (334)
T ss_dssp HHHHHTTSTTCCEEEECCSCCCHHHHHHHHHHHHHHTCEEECSS
T ss_pred HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHcCCEEEccC
Confidence 6544445 99998888 99999865555544332 22467777
No 14
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=97.31 E-value=0.0018 Score=58.93 Aligned_cols=101 Identities=17% Similarity=0.137 Sum_probs=70.2
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
||+.+++...+.|++++..+.+.. .|+.+ .|++++. +++++.++ ..+| ++|.|+.|+.+.+.++.|.+
T Consensus 26 ~G~~~~~~l~~~G~~~v~~VnP~~--~g~~i----~G~~vy~--sl~el~~~---~~vD-~avI~vP~~~~~~~~~e~i~ 93 (305)
T 2fp4_A 26 QGTFHSQQALEYGTNLVGGTTPGK--GGKTH----LGLPVFN--TVKEAKEQ---TGAT-ASVIYVPPPFAAAAINEAID 93 (305)
T ss_dssp HHHHHHHHHHHHTCEEEEEECTTC--TTCEE----TTEEEES--SHHHHHHH---HCCC-EEEECCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCcEEEEeCCCc--CcceE----CCeeeec--hHHHhhhc---CCCC-EEEEecCHHHHHHHHHHHHH
Confidence 377888877778999776665432 12111 2577774 45554321 2588 89999999999999999999
Q ss_pred cCCCe-EEecCCCCHHH---HHHHHHcc-CCcEEEccch
Q 024671 81 VGVPF-VMGTTGGDRVR---LHETIENS-NVYAVISPQM 114 (264)
Q Consensus 81 ~g~pl-ViGTTG~~~~~---~~~l~~~~-~~~~v~s~Nf 114 (264)
.|++. |+-|.|+..++ +.+.++.. ++. ++.||.
T Consensus 94 ~Gi~~iv~~t~G~~~~~~~~l~~~a~~~~gi~-liGPnc 131 (305)
T 2fp4_A 94 AEVPLVVCITEGIPQQDMVRVKHRLLRQGKTR-LIGPNC 131 (305)
T ss_dssp TTCSEEEECCCCCCHHHHHHHHHHHTTCSSCE-EECSSS
T ss_pred CCCCEEEEECCCCChHHHHHHHHHHHhcCCcE-EEeCCC
Confidence 99998 78999998654 33444444 433 677884
No 15
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.30 E-value=0.00042 Score=62.60 Aligned_cols=114 Identities=14% Similarity=0.063 Sum_probs=76.1
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHH
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (264)
||+.+++.+. .++++|+++.+..+..... .++++...+++ ++ . ..+| +||++|.+..-.+++..|+
T Consensus 20 iG~~~~~~l~~~~~~elvav~d~~~~~~~~------~g~~~~~~~~l---~~-~--~~~D-vViiatp~~~h~~~~~~al 86 (304)
T 3bio_A 20 IGRYALQALREAPDFEIAGIVRRNPAEVPF------ELQPFRVVSDI---EQ-L--ESVD-VALVCSPSREVERTALEIL 86 (304)
T ss_dssp HHHHHHHHHHHCTTEEEEEEECC-------------CCTTSCEESSG---GG-S--SSCC-EEEECSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCEEEEEEcCCHHHHHH------cCCCcCCHHHH---Hh-C--CCCC-EEEECCCchhhHHHHHHHH
Confidence 6888888887 5899999887754322111 12221111232 21 1 3578 8999999999999999999
Q ss_pred hcCCCeEEec--CCCCHHHHHHH---HHccCCcEEEccchhHHHHHHHHHHHH
Q 024671 80 KVGVPFVMGT--TGGDRVRLHET---IENSNVYAVISPQMGKQVVAFLAAMEI 127 (264)
Q Consensus 80 ~~g~plViGT--TG~~~~~~~~l---~~~~~~~~v~s~NfSlGv~ll~~~~~~ 127 (264)
+.|+++++-+ |+.+.++.+++ +++.+...+++.+|+-|+..+.++++.
T Consensus 87 ~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g~~~~v~~~~~p~~~~~~~~i~~ 139 (304)
T 3bio_A 87 KKGICTADSFDIHDGILALRRSLGDAAGKSGAAAVIASGWDPGSDSVVRTLMQ 139 (304)
T ss_dssp TTTCEEEECCCCGGGHHHHHHHHHHHHHHHTCEEECSCBBTTBHHHHHHHHHH
T ss_pred HcCCeEEECCCCCCCCHHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHHHHC
Confidence 9999999886 36666554444 445556667788999998877777644
No 16
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=97.10 E-value=0.0019 Score=51.08 Aligned_cols=98 Identities=14% Similarity=0.123 Sum_probs=70.6
Q ss_pred hHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHhc
Q 024671 2 GKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKV 81 (264)
Q Consensus 2 G~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~ 81 (264)
|..+.+.+.+.|+++.+. .+... + + .|++.+. + ++++. . +| +++=|..|+.+.+.++.|.+.
T Consensus 20 g~~v~~~L~~~g~~V~pV-nP~~~---~-i----~G~~~y~--s----l~dlp-~-vD-lavi~~p~~~v~~~v~e~~~~ 81 (122)
T 3ff4_A 20 AYLAAERLKSHGHEFIPV-GRKKG---E-V----LGKTIIN--E----RPVIE-G-VD-TVTLYINPQNQLSEYNYILSL 81 (122)
T ss_dssp HHHHHHHHHHHTCCEEEE-SSSCS---E-E----TTEECBC--S----CCCCT-T-CC-EEEECSCHHHHGGGHHHHHHH
T ss_pred HHHHHHHHHHCCCeEEEE-CCCCC---c-C----CCeeccC--C----hHHCC-C-CC-EEEEEeCHHHHHHHHHHHHhc
Confidence 667777777778887764 32211 1 1 1334442 2 23332 3 78 678899999999999999999
Q ss_pred CCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHHHHH
Q 024671 82 GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVA 120 (264)
Q Consensus 82 g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlGv~l 120 (264)
|++.|+=+.|+.++++.++++++++.++ +| ++|+.+
T Consensus 82 g~k~v~~~~G~~~~e~~~~a~~~Girvv--~n-C~gv~l 117 (122)
T 3ff4_A 82 KPKRVIFNPGTENEELEEILSENGIEPV--IG-CTLVML 117 (122)
T ss_dssp CCSEEEECTTCCCHHHHHHHHHTTCEEE--ES-CHHHHH
T ss_pred CCCEEEECCCCChHHHHHHHHHcCCeEE--CC-cCeEEe
Confidence 9999999999988888889988888877 56 888743
No 17
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.71 E-value=0.0018 Score=61.95 Aligned_cols=139 Identities=16% Similarity=0.267 Sum_probs=84.3
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCCccccccc----c-------------c----cCceeEeecCCchhhHHhhhhcCCC
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKV----E-------------V----CGKEIQVHGLSDRESVLASVFDKYP 58 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~~~~g~~~----~-------------~----~~~~i~i~~~~dl~~~l~~~~~~~~ 58 (264)
||+..++.+. .++++|+++.+.......... + + ....+.++ +|.++.+++ ...
T Consensus 34 iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v~--~D~eeLL~d---~dI 108 (446)
T 3upl_A 34 MGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAVT--DDNDLILSN---PLI 108 (446)
T ss_dssp HHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEEE--SCHHHHHTC---TTC
T ss_pred HHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceEE--CCHHHHhcC---CCC
Confidence 6888888776 589999998875442110000 1 0 00113333 576666642 357
Q ss_pred CEEEEECC-ChHHHHHHHHHHHhcCCCeEEecCCCCHH---HHHHHHHccCCcEEEccchhHHHHHHHHHHHHHHHhcCC
Q 024671 59 NMIVVDYT-VPAAVNGNAELYSKVGVPFVMGTTGGDRV---RLHETIENSNVYAVISPQMGKQVVAFLAAMEIMAEQFPG 134 (264)
Q Consensus 59 d~VvIDFS-~p~~~~~~~~~~~~~g~plViGTTG~~~~---~~~~l~~~~~~~~v~s~NfSlGv~ll~~~~~~aa~~l~~ 134 (264)
| +||++| +|+.-.+++..|+++|+++|+.+.+++.. ++.++++++++.+.++.. -.-...+++++.+ +.+
T Consensus 109 D-aVviaTp~p~~H~e~a~~AL~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvvl~~~~g--dqp~~~~eLv~~a-~~~-- 182 (446)
T 3upl_A 109 D-VIIDATGIPEVGAETGIAAIRNGKHLVMMNVEADVTIGPYLKAQADKQGVIYSLGAG--DEPSSCMELIEFV-SAL-- 182 (446)
T ss_dssp C-EEEECSCCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEEECTT--SHHHHHHHHHHHH-HHT--
T ss_pred C-EEEEcCCChHHHHHHHHHHHHcCCcEEecCcccCHHHHHHHHHHHHHhCCeeeecCC--cchHHHHHHHHHH-HhC--
Confidence 7 899999 57777899999999999999987766544 344555555555544443 2223344555443 444
Q ss_pred CCCCCCEEEEeecCCCCCC
Q 024671 135 AFSGYSLQVLESHQAGKLD 153 (264)
Q Consensus 135 ~~~~~dieI~E~HH~~K~D 153 (264)
+|.+-....-.+.+.+
T Consensus 183 ---G~~~v~~Gkg~~~~~~ 198 (446)
T 3upl_A 183 ---GYEVVSAGKGKNNPLN 198 (446)
T ss_dssp ---TCEEEEEEEEESSCCC
T ss_pred ---CCeEEEeccCcCCccc
Confidence 4677777765554444
No 18
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.61 E-value=0.0029 Score=56.28 Aligned_cols=90 Identities=22% Similarity=0.225 Sum_probs=63.0
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
||+.+++. . ++||++..+ . ..+. + ++.. .+|+++.+ . .|| +||+...++++.+++..+++
T Consensus 23 IG~~v~~~--~-~leLv~v~~--~-k~ge-l-----gv~a--~~d~d~ll----a-~pD-~VVe~A~~~av~e~~~~iL~ 82 (253)
T 1j5p_A 23 IGKKLVEL--G-NFEKIYAYD--R-ISKD-I-----PGVV--RLDEFQVP----S-DVS-TVVECASPEAVKEYSLQILK 82 (253)
T ss_dssp HHHHHHHH--S-CCSEEEEEC--S-SCCC-C-----SSSE--ECSSCCCC----T-TCC-EEEECSCHHHHHHHHHHHTT
T ss_pred HHHHHHhc--C-CcEEEEEEe--c-cccc-c-----Ccee--eCCHHHHh----h-CCC-EEEECCCHHHHHHHHHHHHH
Confidence 58888887 4 999999877 2 2221 1 2222 24544443 2 689 89999999999999999999
Q ss_pred cCCCeEEecCCC--CHH---HHHHHHHccCCcEEE
Q 024671 81 VGVPFVMGTTGG--DRV---RLHETIENSNVYAVI 110 (264)
Q Consensus 81 ~g~plViGTTG~--~~~---~~~~l~~~~~~~~v~ 110 (264)
.|+++|+..+|. +++ ++++.|++.+..+.+
T Consensus 83 aG~dvv~~S~gaLad~~l~~~L~~aA~~gg~~l~v 117 (253)
T 1j5p_A 83 NPVNYIIISTSAFADEVFRERFFSELKNSPARVFF 117 (253)
T ss_dssp SSSEEEECCGGGGGSHHHHHHHHHHHHTCSCEEEC
T ss_pred CCCCEEEcChhhhcCHHHHHHHHHHHHHCCCeEEe
Confidence 999999999994 443 345556655555433
No 19
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=96.49 E-value=0.019 Score=46.10 Aligned_cols=100 Identities=12% Similarity=0.032 Sum_probs=69.5
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
||+.+.+.+.+.|+++... .+.. ..+ .|++++. +++ ++. ..+| ++|=|+.|+.+.+.++.|.+
T Consensus 37 ~G~~~~~~l~~~G~~v~~V-np~~----~~i----~G~~~y~--sl~----~l~-~~vD-lvvi~vp~~~~~~vv~~~~~ 99 (144)
T 2d59_A 37 DANIVMKYLLEHGYDVYPV-NPKY----EEV----LGRKCYP--SVL----DIP-DKIE-VVDLFVKPKLTMEYVEQAIK 99 (144)
T ss_dssp HHHHHHHHHHHTTCEEEEE-CTTC----SEE----TTEECBS--SGG----GCS-SCCS-EEEECSCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHCCCEEEEE-CCCC----CeE----CCeeccC--CHH----HcC-CCCC-EEEEEeCHHHHHHHHHHHHH
Confidence 5778888877888885543 3221 111 1455553 332 222 2578 67778999999999999999
Q ss_pred cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHHHH
Q 024671 81 VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVV 119 (264)
Q Consensus 81 ~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlGv~ 119 (264)
.|++.++-++|...+++.++++..++. ++-|| ++|+.
T Consensus 100 ~gi~~i~~~~g~~~~~l~~~a~~~Gi~-vvGpn-c~gv~ 136 (144)
T 2d59_A 100 KGAKVVWFQYNTYNREASKKADEAGLI-IVANR-CMMRE 136 (144)
T ss_dssp HTCSEEEECTTCCCHHHHHHHHHTTCE-EEESC-CHHHH
T ss_pred cCCCEEEECCCchHHHHHHHHHHcCCE-EEcCC-chhhc
Confidence 999999999998877888888877776 55666 56653
No 20
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=96.44 E-value=0.0032 Score=57.79 Aligned_cols=145 Identities=16% Similarity=0.165 Sum_probs=89.9
Q ss_pred ChHHHHHHHH-h------CCCeEEEEEcCCCcccccccc------c-cCce-eEeecCCchhhHHhhhhcCCCCEEEEEC
Q 024671 1 MGKAVIKAAD-A------AGLELVPVSFGTEEESGQKVE------V-CGKE-IQVHGLSDRESVLASVFDKYPNMIVVDY 65 (264)
Q Consensus 1 MG~~i~~~~~-~------~~~eLv~~~~~~~~~~g~~~~------~-~~~~-i~i~~~~dl~~~l~~~~~~~~d~VvIDF 65 (264)
||+.+++.+. . .+++|+++.++.......++. . ...+ ++-... |.++.+. +..+| ||||+
T Consensus 15 VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~~~~~-d~~e~l~---~~~iD-vVVe~ 89 (325)
T 3ing_A 15 VGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRISDRAF-SGPEDLM---GEAAD-LLVDC 89 (325)
T ss_dssp HHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSCSSBC-CSGGGGT---TSCCS-EEEEC
T ss_pred HHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCCcccC-CHHHHhc---CCCCC-EEEEC
Confidence 5888888886 3 689999987754322111100 0 0001 110000 3333333 34678 89999
Q ss_pred CCh----HHHHHHHHHHHhcCCCeEEecCCCCHH---HHHHHHHccCCcEEEccchhHHHHHHHHHHHHHHHhcCCCCCC
Q 024671 66 TVP----AAVNGNAELYSKVGVPFVMGTTGGDRV---RLHETIENSNVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSG 138 (264)
Q Consensus 66 S~p----~~~~~~~~~~~~~g~plViGTTG~~~~---~~~~l~~~~~~~~v~s~NfSlGv~ll~~~~~~aa~~l~~~~~~ 138 (264)
|.+ +...+++..|+++|+++|+...++..+ ++.+++++.+..++|-+|.+-|.-++..+- +.+ .+
T Consensus 90 T~~~~~~~pa~~~~~~aL~aGkhVVtaNK~~la~~~~eL~~lA~~~g~~~~~Ea~vg~giPii~~l~----~~l----~g 161 (325)
T 3ing_A 90 TPASRDGVREYSLYRMAFESGMNVVTANKSGLANKWHDIMDSANQNSKYIRYEATVAGGVPLFSVLD----YSI----LP 161 (325)
T ss_dssp CCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEECGGGSSTTSCCHHHHH----HTC----TT
T ss_pred CCCccccchHHHHHHHHHHCCCeEEEcCchhHHHHHHHHHHHHHHcCCeEEEEeeecccCHHHHHHH----HHh----hC
Confidence 965 556899999999999999998886543 455566667788999999988876654432 223 23
Q ss_pred CCEEEEeecCCCCCCC-cHHHHHHHHHH
Q 024671 139 YSLQVLESHQAGKLDT-SGTAKAVISCF 165 (264)
Q Consensus 139 ~dieI~E~HH~~K~Da-SGTAl~l~~~i 165 (264)
-.|.=++- - |||..-+...+
T Consensus 162 ~~I~~i~G-------i~nGT~nyil~~m 182 (325)
T 3ing_A 162 SKVKRFRG-------IVSSTINYVIRNM 182 (325)
T ss_dssp CCEEEEEE-------ECCHHHHHHHHHH
T ss_pred CCeeEEEE-------EEEeeeeEEeecc
Confidence 35544443 4 89887655544
No 21
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=96.41 E-value=0.018 Score=51.98 Aligned_cols=108 Identities=14% Similarity=0.100 Sum_probs=72.3
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHH
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (264)
||+..++.+. .++++|+++.+...... +.. ....+++ ....|+++.+++ ..+| +|+..|.|..-.+.+..|+
T Consensus 16 ~g~~~~~~l~~~~~~~l~av~d~~~~~~-~~~-~~~~~~~-~~~~~~~~ll~~---~~~D-~V~i~tp~~~h~~~~~~al 88 (330)
T 3e9m_A 16 IVPRFVAGLRESAQAEVRGIASRRLENA-QKM-AKELAIP-VAYGSYEELCKD---ETID-IIYIPTYNQGHYSAAKLAL 88 (330)
T ss_dssp THHHHHHHHHHSSSEEEEEEBCSSSHHH-HHH-HHHTTCC-CCBSSHHHHHHC---TTCS-EEEECCCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEEeCCHHHH-HHH-HHHcCCC-ceeCCHHHHhcC---CCCC-EEEEcCCCHHHHHHHHHHH
Confidence 7888888887 47899998877543211 111 0011221 112466666642 3578 7999999999999999999
Q ss_pred hcCCCeEEecC-CCCHHHHHHH---HHccCCcEEEccchh
Q 024671 80 KVGVPFVMGTT-GGDRVRLHET---IENSNVYAVISPQMG 115 (264)
Q Consensus 80 ~~g~plViGTT-G~~~~~~~~l---~~~~~~~~v~s~NfS 115 (264)
+.|+++++-.+ +.+.++.+++ +++.++.+..+.|+-
T Consensus 89 ~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~r 128 (330)
T 3e9m_A 89 SQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQKSV 128 (330)
T ss_dssp HTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECCSGG
T ss_pred HCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEhhh
Confidence 99999998766 5676655444 555567777777743
No 22
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=96.37 E-value=0.013 Score=53.01 Aligned_cols=108 Identities=12% Similarity=0.034 Sum_probs=72.7
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHH
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (264)
||+..++.+. .++++|+++.+.......... ...+++++ .|+++.++ +..+| +|+..|-+..-.+.+..|+
T Consensus 15 ~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a--~~~g~~~~--~~~~~~l~---~~~~D-~V~i~tp~~~h~~~~~~al 86 (344)
T 3euw_A 15 IGHVHAANIAANPDLELVVIADPFIEGAQRLA--EANGAEAV--ASPDEVFA---RDDID-GIVIGSPTSTHVDLITRAV 86 (344)
T ss_dssp HHHHHHHHHHHCTTEEEEEEECSSHHHHHHHH--HTTTCEEE--SSHHHHTT---CSCCC-EEEECSCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEECCCHHHHHHHH--HHcCCcee--CCHHHHhc---CCCCC-EEEEeCCchhhHHHHHHHH
Confidence 6788888776 578999988775432111101 11134444 46666654 23578 7999999999999999999
Q ss_pred hcCCCeEEecC-CCCHHHHHHH---HHccCCcEEEccchhH
Q 024671 80 KVGVPFVMGTT-GGDRVRLHET---IENSNVYAVISPQMGK 116 (264)
Q Consensus 80 ~~g~plViGTT-G~~~~~~~~l---~~~~~~~~v~s~NfSl 116 (264)
+.|+++++-.. +.+.++.+++ +++.++.+....|+-.
T Consensus 87 ~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~ 127 (344)
T 3euw_A 87 ERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRF 127 (344)
T ss_dssp HTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCGGGG
T ss_pred HcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecchhhc
Confidence 99999998766 6676655444 4555566777777433
No 23
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=96.37 E-value=0.01 Score=53.01 Aligned_cols=116 Identities=17% Similarity=0.123 Sum_probs=75.2
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHH
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (264)
||+..++.+. .++++++++.+..+.... . .... ++.+ .+.++.++ +..+| +|+..|.|..-.+.+..|+
T Consensus 21 ~g~~~~~~l~~~~~~~~v~v~d~~~~~~~-~--~~~~-~~~~--~~~~~~l~---~~~~D-~V~i~tp~~~h~~~~~~al 90 (315)
T 3c1a_A 21 WGKNYIRTIAGLPGAALVRLASSNPDNLA-L--VPPG-CVIE--SDWRSVVS---APEVE-AVIIATPPATHAEITLAAI 90 (315)
T ss_dssp TTTTHHHHHHHCTTEEEEEEEESCHHHHT-T--CCTT-CEEE--SSTHHHHT---CTTCC-EEEEESCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEEeCCHHHHH-H--HHhh-Cccc--CCHHHHhh---CCCCC-EEEEeCChHHHHHHHHHHH
Confidence 7888888877 478999988775432111 1 1111 3333 35555553 23578 7999999999999999999
Q ss_pred hcCCCeEEe-cCCCCHHHHHH---HHHccCCcEEEccc--hhHHHHHHHHHHH
Q 024671 80 KVGVPFVMG-TTGGDRVRLHE---TIENSNVYAVISPQ--MGKQVVAFLAAME 126 (264)
Q Consensus 80 ~~g~plViG-TTG~~~~~~~~---l~~~~~~~~v~s~N--fSlGv~ll~~~~~ 126 (264)
+.|+++++- ....+.++.++ +++++++.+..+.| |+-.+..+.++++
T Consensus 91 ~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~ 143 (315)
T 3c1a_A 91 ASGKAVLVEKPLTLDLAEAEAVAAAAKATGVMVWVEHTQLFNPAWEALKADLT 143 (315)
T ss_dssp HTTCEEEEESSSCSCHHHHHHHHHHHHHHCCCEEEECGGGGCHHHHHHHHTHH
T ss_pred HCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCEEEEeechhcCHHHHHHHHHHH
Confidence 999999987 44567655444 45555666666666 4455545444443
No 24
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=96.32 E-value=0.011 Score=60.63 Aligned_cols=106 Identities=10% Similarity=0.110 Sum_probs=69.3
Q ss_pred hHHHHHHHH-h-----CCCeEEEEEcCCCccccccc--cccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHH
Q 024671 2 GKAVIKAAD-A-----AGLELVPVSFGTEEESGQKV--EVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNG 73 (264)
Q Consensus 2 G~~i~~~~~-~-----~~~eLv~~~~~~~~~~g~~~--~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~ 73 (264)
||.+.+.+. . ++..+|+++.+.....++.+ |....|++++. +++++... ...+| +.|-|.-|..+.+
T Consensus 506 g~~~~~ml~~~~~~~~~~~~vVa~V~P~~~g~~~~~~~G~~~~Gvp~y~--sv~ea~~~--~p~~D-laVI~vP~~~v~~ 580 (829)
T 3pff_A 506 TRAVQGMLDFDYVCSRDEPSVAAMVYPFTGDHKQKFYWGHKEILIPVFK--NMADAMRK--HPEVD-VLINFASLRSAYD 580 (829)
T ss_dssp HHHHHHHHHHHHHTTCSSCSEEEEECTTSCSEEEEEEETTEEEEEEEES--SHHHHHHH--CTTCC-EEEECCCTTTHHH
T ss_pred HHHHHHHHHhcccccCCCCcEEEEEcCCCCCccceEEecCCcCCcccCC--cHHHHhhc--cCCCc-EEEEeCCHHHHHH
Confidence 665555554 3 57899999885432111222 33335788875 55554331 01368 8999999999999
Q ss_pred HHHHHHh-cCCCeEEe-cCCCCHHHHHHH---HHccCCcEEEccc
Q 024671 74 NAELYSK-VGVPFVMG-TTGGDRVRLHET---IENSNVYAVISPQ 113 (264)
Q Consensus 74 ~~~~~~~-~g~plViG-TTG~~~~~~~~l---~~~~~~~~v~s~N 113 (264)
.++.|.+ .|++.|+. |.||.+.+.+++ ++..++ -++-||
T Consensus 581 av~ea~~~~Gvk~~Viis~Gf~e~~~~~l~~~A~~~g~-rliGPN 624 (829)
T 3pff_A 581 STMETMNYAQIRTIAIIAEGIPEALTRKLIKKADQKGV-TIIGPA 624 (829)
T ss_dssp HHHHHTTSTTCCEEEECCSCCCHHHHHHHHHHHHHHTC-EEECSS
T ss_pred HHHHHHhhCCCCEEEEeCCCCCHHHHHHHHHHHHHcCC-EEEcCC
Confidence 9999999 99996655 999987544444 333332 466777
No 25
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=96.20 E-value=0.05 Score=48.86 Aligned_cols=116 Identities=9% Similarity=-0.004 Sum_probs=74.1
Q ss_pred ChHHHHHHHH-h-CCCeEEEEEcCCCccccccccccCcee-EeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHH
Q 024671 1 MGKAVIKAAD-A-AGLELVPVSFGTEEESGQKVEVCGKEI-QVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAEL 77 (264)
Q Consensus 1 MG~~i~~~~~-~-~~~eLv~~~~~~~~~~g~~~~~~~~~i-~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~ 77 (264)
||+..++.+. + ++++++++.+..+... +.. ....++ .++ +|.++.++. ..+| +|+.+|.+..-.+.+..
T Consensus 19 ig~~~~~~l~~~~~~~~~vav~d~~~~~~-~~~-a~~~g~~~~~--~~~~~~l~~---~~~D-~V~i~tp~~~h~~~~~~ 90 (346)
T 3cea_A 19 LGERHARHLVNKIQGVKLVAACALDSNQL-EWA-KNELGVETTY--TNYKDMIDT---ENID-AIFIVAPTPFHPEMTIY 90 (346)
T ss_dssp THHHHHHHHHHTCSSEEEEEEECSCHHHH-HHH-HHTTCCSEEE--SCHHHHHTT---SCCS-EEEECSCGGGHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcEEEEEecCCHHHH-HHH-HHHhCCCccc--CCHHHHhcC---CCCC-EEEEeCChHhHHHHHHH
Confidence 7888888876 4 6899998877543211 110 011123 233 356655532 3578 79999999999999999
Q ss_pred HHhcCCCeEEe-cCCCCHHHHHHH---HHcc-CCcEEEccch--hHHHHHHHHH
Q 024671 78 YSKVGVPFVMG-TTGGDRVRLHET---IENS-NVYAVISPQM--GKQVVAFLAA 124 (264)
Q Consensus 78 ~~~~g~plViG-TTG~~~~~~~~l---~~~~-~~~~v~s~Nf--SlGv~ll~~~ 124 (264)
|++.|+++++. ..+.+.++.+++ ++.. ++.++.+.|+ +-++..+.++
T Consensus 91 al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~~p~~~~~~~~ 144 (346)
T 3cea_A 91 AMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKI 144 (346)
T ss_dssp HHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSCEECCCGGGTCHHHHHHHHH
T ss_pred HHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEEecccccCHHHHHHHHH
Confidence 99999999886 356676664444 4555 6666666664 3344444433
No 26
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=96.16 E-value=0.03 Score=50.96 Aligned_cols=108 Identities=12% Similarity=0.065 Sum_probs=70.9
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCCccccccc-cccCc--eeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHH
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKV-EVCGK--EIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAE 76 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~~~~g~~~-~~~~~--~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~ 76 (264)
||+..++.+. .++++|+++.+...... +.. ..-+. ...++ .|+++.+++ ..+| +|+..|.+..-.+.+.
T Consensus 17 ig~~~~~~l~~~~~~~lv~v~d~~~~~~-~~~a~~~~~~~~~~~~--~~~~~ll~~---~~~D-~V~i~tp~~~h~~~~~ 89 (362)
T 1ydw_A 17 IARKVSRAIHLAPNATISGVASRSLEKA-KAFATANNYPESTKIH--GSYESLLED---PEID-ALYVPLPTSLHVEWAI 89 (362)
T ss_dssp THHHHHHHHHHCTTEEEEEEECSSHHHH-HHHHHHTTCCTTCEEE--SSHHHHHHC---TTCC-EEEECCCGGGHHHHHH
T ss_pred HHHHHHHHHhhCCCcEEEEEEcCCHHHH-HHHHHHhCCCCCCeee--CCHHHHhcC---CCCC-EEEEcCChHHHHHHHH
Confidence 7888888877 47899998877543211 111 00010 12333 466666542 3578 7999999999999999
Q ss_pred HHHhcCCCeEEec-CCCCHHHHHH---HHHccCCcEEEccchh
Q 024671 77 LYSKVGVPFVMGT-TGGDRVRLHE---TIENSNVYAVISPQMG 115 (264)
Q Consensus 77 ~~~~~g~plViGT-TG~~~~~~~~---l~~~~~~~~v~s~NfS 115 (264)
.|++.|+++++-. ...+.++.++ +++++++.+..+.|+-
T Consensus 90 ~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~~~~~~~~r 132 (362)
T 1ydw_A 90 KAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQIMDGTMWV 132 (362)
T ss_dssp HHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCCEEECCCGG
T ss_pred HHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCEEEEEEeec
Confidence 9999999999976 4567665444 4555566666666543
No 27
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=96.12 E-value=0.021 Score=51.22 Aligned_cols=106 Identities=15% Similarity=0.143 Sum_probs=71.6
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHH
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (264)
||+..++.+. .++++|+++.+..+... +.. ....+++ + .|+++.+++ ..+| +|+..|-|..-.+.+..|+
T Consensus 14 ~g~~~~~~l~~~~~~~l~av~d~~~~~~-~~~-~~~~~~~-~--~~~~~~l~~---~~~D-~V~i~tp~~~h~~~~~~al 84 (331)
T 4hkt_A 14 IGKVHAKAVSGNADARLVAVADAFPAAA-EAI-AGAYGCE-V--RTIDAIEAA---ADID-AVVICTPTDTHADLIERFA 84 (331)
T ss_dssp HHHHHHHHHHHCTTEEEEEEECSSHHHH-HHH-HHHTTCE-E--CCHHHHHHC---TTCC-EEEECSCGGGHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCcEEEEEECCCHHHH-HHH-HHHhCCC-c--CCHHHHhcC---CCCC-EEEEeCCchhHHHHHHHHH
Confidence 6788888776 47999998877543211 111 0011344 2 466666642 3578 7999999999999999999
Q ss_pred hcCCCeEEecC-CCCHHHHHH---HHHccCCcEEEccchh
Q 024671 80 KVGVPFVMGTT-GGDRVRLHE---TIENSNVYAVISPQMG 115 (264)
Q Consensus 80 ~~g~plViGTT-G~~~~~~~~---l~~~~~~~~v~s~NfS 115 (264)
+.|+++++-.+ +.+.++.++ ++++.++.+....|+-
T Consensus 85 ~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r 124 (331)
T 4hkt_A 85 RAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNRR 124 (331)
T ss_dssp HTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGG
T ss_pred HcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEccccc
Confidence 99999998765 567665544 4555567777777743
No 28
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=96.08 E-value=0.035 Score=44.44 Aligned_cols=102 Identities=11% Similarity=0.088 Sum_probs=70.8
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
||+.+.+...+.|+++.. +.+. ..+..+ .|++++. ++ +++. ..+| ++|=|..|+.+.+.++.|.+
T Consensus 28 ~G~~~~~~l~~~G~~v~~-vnp~--~~~~~i----~G~~~~~--sl----~el~-~~vD-lavi~vp~~~~~~v~~~~~~ 92 (140)
T 1iuk_A 28 PAHYVPRYLREQGYRVLP-VNPR--FQGEEL----FGEEAVA--SL----LDLK-EPVD-ILDVFRPPSALMDHLPEVLA 92 (140)
T ss_dssp HHHHHHHHHHHTTCEEEE-ECGG--GTTSEE----TTEECBS--SG----GGCC-SCCS-EEEECSCHHHHTTTHHHHHH
T ss_pred hHHHHHHHHHHCCCEEEE-eCCC--cccCcC----CCEEecC--CH----HHCC-CCCC-EEEEEeCHHHHHHHHHHHHH
Confidence 578888888788888554 3321 111211 1456653 32 2222 2578 67779999999999999999
Q ss_pred cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHHHH
Q 024671 81 VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVV 119 (264)
Q Consensus 81 ~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlGv~ 119 (264)
.|++.|+-++|+..+++.++++..++. ++-|| ++|+.
T Consensus 93 ~gi~~i~~~~g~~~~~~~~~a~~~Gir-~vgpn-c~g~~ 129 (140)
T 1iuk_A 93 LRPGLVWLQSGIRHPEFEKALKEAGIP-VVADR-CLMVE 129 (140)
T ss_dssp HCCSCEEECTTCCCHHHHHHHHHTTCC-EEESC-CHHHH
T ss_pred cCCCEEEEcCCcCHHHHHHHHHHcCCE-EEcCC-ccceE
Confidence 999999999999877888888877766 45677 67763
No 29
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=96.03 E-value=0.17 Score=45.37 Aligned_cols=116 Identities=16% Similarity=0.078 Sum_probs=74.9
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCCccccccccccCceeE-eecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQ-VHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~-i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
||+..++.+. .++.+|+++.+...... +.. ....+++ .+ .|+++.+++ ..+| +|+-.|-+..-.+.+..|
T Consensus 16 ig~~~~~~l~~~~~~~~~av~d~~~~~~-~~~-a~~~~~~~~~--~~~~~ll~~---~~~D-~V~i~tp~~~h~~~~~~a 87 (329)
T 3evn_A 16 VAPRFIEGVRLAGNGEVVAVSSRTLESA-QAF-ANKYHLPKAY--DKLEDMLAD---ESID-VIYVATINQDHYKVAKAA 87 (329)
T ss_dssp THHHHHHHHHHHCSEEEEEEECSCSSTT-CC----CCCCSCEE--SCHHHHHTC---TTCC-EEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEEcCCHHHH-HHH-HHHcCCCccc--CCHHHHhcC---CCCC-EEEECCCcHHHHHHHHHH
Confidence 6788888776 57899998877544221 111 0111232 32 466666642 3578 789999999999999999
Q ss_pred HhcCCCeEEecC-CCCHHHHHH---HHHccCCcEEEccch--hHHHHHHHHH
Q 024671 79 SKVGVPFVMGTT-GGDRVRLHE---TIENSNVYAVISPQM--GKQVVAFLAA 124 (264)
Q Consensus 79 ~~~g~plViGTT-G~~~~~~~~---l~~~~~~~~v~s~Nf--SlGv~ll~~~ 124 (264)
++.|+++++=.. ..+.++.++ +++++++.+..+.|+ .=.+..+.++
T Consensus 88 l~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~~~~ 139 (329)
T 3evn_A 88 LLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVFIPMTQVIKKL 139 (329)
T ss_dssp HHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEECSSCSSHHHHHHHHH
T ss_pred HHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEEEEEcccCCHHHHHHHHH
Confidence 999999998665 456555444 455566777777774 4444444433
No 30
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=95.95 E-value=0.0051 Score=56.42 Aligned_cols=120 Identities=14% Similarity=0.091 Sum_probs=78.0
Q ss_pred ChHHHHHHHH-h--------CCCeEEEEEcCCCccccc-ccc--cc--CceeEeecCCchhhHHhhhhcCCCCEEEEECC
Q 024671 1 MGKAVIKAAD-A--------AGLELVPVSFGTEEESGQ-KVE--VC--GKEIQVHGLSDRESVLASVFDKYPNMIVVDYT 66 (264)
Q Consensus 1 MG~~i~~~~~-~--------~~~eLv~~~~~~~~~~g~-~~~--~~--~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS 66 (264)
||+.+++.+. . .+++|+++.++....... +.. .. .....++...|+++.+++ ..+| ||||.|
T Consensus 13 VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~~~~d~~~ll~~---~~iD-vVv~~t 88 (327)
T 3do5_A 13 VGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLRDDAKAIEVVRS---ADYD-VLIEAS 88 (327)
T ss_dssp HHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCSBCCCHHHHHHH---SCCS-EEEECC
T ss_pred HHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCccccCCCCHHHHhcC---CCCC-EEEECC
Confidence 5788888876 4 789999988754322111 100 00 000112212366666653 4678 899999
Q ss_pred ChHH----HHHHHHHHHhcCCCeEEecCCCCH---HHHHHHHHccCCcEEEccchhHHHHHHHHH
Q 024671 67 VPAA----VNGNAELYSKVGVPFVMGTTGGDR---VRLHETIENSNVYAVISPQMGKQVVAFLAA 124 (264)
Q Consensus 67 ~p~~----~~~~~~~~~~~g~plViGTTG~~~---~~~~~l~~~~~~~~v~s~NfSlGv~ll~~~ 124 (264)
.++. ..+++..|+++|+++|+...+.-. +++.+++++.++.+++.+|..-|.-++..+
T Consensus 89 p~~~h~~~a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~~~~~ea~v~~g~Pii~~l 153 (327)
T 3do5_A 89 VTRVDGGEGVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGVRLMYEATVGGAMPVVKLA 153 (327)
T ss_dssp CCC----CHHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTCCEECGGGSSTTSCCHHHH
T ss_pred CCcccchhHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCCcEEEEEEeeecCHHHHHH
Confidence 6654 589999999999999999776532 356666777778889988888776555543
No 31
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=95.77 E-value=0.021 Score=51.05 Aligned_cols=104 Identities=10% Similarity=0.002 Sum_probs=67.0
Q ss_pred ChHH-HHHHHH-hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKA-VIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~-i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
||+. +++.+. .++++|+++.+..+... +.. ....+++++ ++.++. + ..+| +|+.+|-|..-.+.+..|
T Consensus 16 ~g~~~~~~~l~~~~~~~lvav~d~~~~~~-~~~-~~~~g~~~~--~~~~~l-~----~~~D-~V~i~tp~~~h~~~~~~a 85 (319)
T 1tlt_A 16 IAQKAWLPVLAAASDWTLQGAWSPTRAKA-LPI-CESWRIPYA--DSLSSL-A----ASCD-AVFVHSSTASHFDVVSTL 85 (319)
T ss_dssp HHHHTHHHHHHSCSSEEEEEEECSSCTTH-HHH-HHHHTCCBC--SSHHHH-H----TTCS-EEEECSCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEEEECCCHHHH-HHH-HHHcCCCcc--CcHHHh-h----cCCC-EEEEeCCchhHHHHHHHH
Confidence 5775 777666 47899998877544211 111 001123332 354432 2 3688 799999999999999999
Q ss_pred HhcCCCeEEec-CCCCHHHHHHH---HHccCCcEEEccch
Q 024671 79 SKVGVPFVMGT-TGGDRVRLHET---IENSNVYAVISPQM 114 (264)
Q Consensus 79 ~~~g~plViGT-TG~~~~~~~~l---~~~~~~~~v~s~Nf 114 (264)
++.|+++++-. .+.+.++.+++ +++.++.+..+.|+
T Consensus 86 l~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~ 125 (319)
T 1tlt_A 86 LNAGVHVCVDKPLAENLRDAERLVELAARKKLTLMVGFNR 125 (319)
T ss_dssp HHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGG
T ss_pred HHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEeeec
Confidence 99999999874 56777665554 44455666666554
No 32
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=95.75 E-value=0.041 Score=49.90 Aligned_cols=114 Identities=14% Similarity=0.072 Sum_probs=74.0
Q ss_pred ChHH-HHHHHH-hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKA-VIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~-i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
||+. .++.+. .++++|+++.+..+....... .++.++ .|+++.+++ ..+| +|+..|-+..-.+.+..|
T Consensus 18 ~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~----~~~~~~--~~~~~ll~~---~~vD-~V~i~tp~~~H~~~~~~a 87 (352)
T 3kux_A 18 ASKTFHAPLIMGTPGLELAGVSSSDASKVHADW----PAIPVV--SDPQMLFND---PSID-LIVIPTPNDTHFPLAQSA 87 (352)
T ss_dssp HHHHTHHHHHHTSTTEEEEEEECSCHHHHHTTC----SSCCEE--SCHHHHHHC---SSCC-EEEECSCTTTHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCcEEEEEECCCHHHHHhhC----CCCceE--CCHHHHhcC---CCCC-EEEEeCChHHHHHHHHHH
Confidence 4554 555665 478999988775432111111 123443 477776652 3578 789999888889999999
Q ss_pred HhcCCCeEEecC-CCCHHHHHH---HHHccCCcEEEccch--hHHHHHHHHH
Q 024671 79 SKVGVPFVMGTT-GGDRVRLHE---TIENSNVYAVISPQM--GKQVVAFLAA 124 (264)
Q Consensus 79 ~~~g~plViGTT-G~~~~~~~~---l~~~~~~~~v~s~Nf--SlGv~ll~~~ 124 (264)
++.|+++++-.. ..+.++.++ +++++++.+....|+ +=.+..+.++
T Consensus 88 l~aGkhV~~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~ 139 (352)
T 3kux_A 88 LAAGKHVVVDKPFTVTLSQANALKEHADDAGLLLSVFHNRRWDSDFLTLKTL 139 (352)
T ss_dssp HHTTCEEEECSSCCSCHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHH
T ss_pred HHCCCcEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEeecccCHHHHHHHHH
Confidence 999999999877 677665544 455556667667774 4444333333
No 33
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=95.65 E-value=0.091 Score=41.88 Aligned_cols=99 Identities=14% Similarity=0.142 Sum_probs=66.3
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
||+.+++.+.+.|+++.. +++... .+ .|++++. ++++. . ..+| ++|=+..|+.+.+.++.|.+
T Consensus 29 ~G~~~~~~L~~~G~~V~~-vnp~~~----~i----~G~~~~~--s~~el----~-~~vD-lvii~vp~~~v~~v~~~~~~ 91 (138)
T 1y81_A 29 YGNIILKDLLSKGFEVLP-VNPNYD----EI----EGLKCYR--SVREL----P-KDVD-VIVFVVPPKVGLQVAKEAVE 91 (138)
T ss_dssp HHHHHHHHHHHTTCEEEE-ECTTCS----EE----TTEECBS--SGGGS----C-TTCC-EEEECSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEE-eCCCCC----eE----CCeeecC--CHHHh----C-CCCC-EEEEEeCHHHHHHHHHHHHH
Confidence 788999988888998554 343211 11 1355542 33322 1 2578 67778889999999999999
Q ss_pred cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHHH
Q 024671 81 VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQV 118 (264)
Q Consensus 81 ~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlGv 118 (264)
.|++.++--||-..+++.+.+++.++. ++-|| ++|+
T Consensus 92 ~g~~~i~~~~~~~~~~l~~~a~~~Gi~-~igpn-c~g~ 127 (138)
T 1y81_A 92 AGFKKLWFQPGAESEEIRRFLEKAGVE-YSFGR-CIMV 127 (138)
T ss_dssp TTCCEEEECTTSCCHHHHHHHHHHTCE-EECSC-CHHH
T ss_pred cCCCEEEEcCccHHHHHHHHHHHCCCE-EEcCC-cceE
Confidence 999876666665556677777766666 55777 6665
No 34
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=95.62 E-value=0.13 Score=45.95 Aligned_cols=116 Identities=12% Similarity=0.106 Sum_probs=74.3
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCCccccccccccCcee-EeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEI-QVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i-~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
||+..++.+. .++++++++.+...... +.. ....++ .++ .|.++.+ +..+| +|+..|.|..-.+.+..|
T Consensus 12 ~g~~~~~~l~~~~~~~~~~v~d~~~~~~-~~~-~~~~~~~~~~--~~~~~~l----~~~~D-~V~i~tp~~~h~~~~~~a 82 (325)
T 2ho3_A 12 ISHHFIEAAHTSGEYQLVAIYSRKLETA-ATF-ASRYQNIQLF--DQLEVFF----KSSFD-LVYIASPNSLHFAQAKAA 82 (325)
T ss_dssp HHHHHHHHHHHTTSEEEEEEECSSHHHH-HHH-GGGSSSCEEE--SCHHHHH----TSSCS-EEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEEEEEeCCHHHH-HHH-HHHcCCCeEe--CCHHHHh----CCCCC-EEEEeCChHHHHHHHHHH
Confidence 6788888776 46899998777543211 111 001121 333 3565555 23678 799999999999999999
Q ss_pred HhcCCCeEEec-CCCCHHHHHHH---HHccCCcEEEccc--hhHHHHHHHHHH
Q 024671 79 SKVGVPFVMGT-TGGDRVRLHET---IENSNVYAVISPQ--MGKQVVAFLAAM 125 (264)
Q Consensus 79 ~~~g~plViGT-TG~~~~~~~~l---~~~~~~~~v~s~N--fSlGv~ll~~~~ 125 (264)
++.|+++++-. ...+.++.+++ ++++++.+..+.| |+-++..+.+++
T Consensus 83 l~~gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i 135 (325)
T 2ho3_A 83 LSAGKHVILEKPAVSQPQEWFDLIQTAEKNNCFIFEAARNYHEKAFTTIKNFL 135 (325)
T ss_dssp HHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEECTTTTCHHHHHHHHHH
T ss_pred HHcCCcEEEecCCcCCHHHHHHHHHHHHHcCCEEEEEEhhhcChHHHHHHHHh
Confidence 99999999885 45676654444 4555666666555 555555544443
No 35
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=95.57 E-value=0.084 Score=47.07 Aligned_cols=108 Identities=13% Similarity=0.072 Sum_probs=69.0
Q ss_pred ChHHH-HHHHHhCCCeEEEEEcCCCccccccccccCceeE-eecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAV-IKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQ-VHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i-~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~-i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
||+.. ++.+.+++++++++.+...... +.. ....+++ + ..|+++.++. ..+| +|+..|.|..-.+.+..|
T Consensus 11 ~g~~~~~~~l~~~~~~~vav~d~~~~~~-~~~-~~~~g~~~~--~~~~~~~l~~---~~~D-~V~i~tp~~~h~~~~~~a 82 (332)
T 2glx_A 11 IAREWVIGAIRATGGEVVSMMSTSAERG-AAY-ATENGIGKS--VTSVEELVGD---PDVD-AVYVSTTNELHREQTLAA 82 (332)
T ss_dssp HHHHTHHHHHHHTTCEEEEEECSCHHHH-HHH-HHHTTCSCC--BSCHHHHHTC---TTCC-EEEECSCGGGHHHHHHHH
T ss_pred HHHHhhhHHhhcCCCeEEEEECCCHHHH-HHH-HHHcCCCcc--cCCHHHHhcC---CCCC-EEEEeCChhHhHHHHHHH
Confidence 57776 6555558899998877543211 111 0001222 2 2466655532 3578 799999999999999999
Q ss_pred HhcCCCeEEec-CCCCHHHHHH---HHHccCCcEEEccchhH
Q 024671 79 SKVGVPFVMGT-TGGDRVRLHE---TIENSNVYAVISPQMGK 116 (264)
Q Consensus 79 ~~~g~plViGT-TG~~~~~~~~---l~~~~~~~~v~s~NfSl 116 (264)
++.|+++++-. ...+.++.++ ++++.++.+..+.|+-.
T Consensus 83 l~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~ 124 (332)
T 2glx_A 83 IRAGKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHHLRN 124 (332)
T ss_dssp HHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCCGGG
T ss_pred HHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEeehhhc
Confidence 99999998864 3566665444 45555677777777443
No 36
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=95.47 E-value=0.15 Score=46.17 Aligned_cols=115 Identities=13% Similarity=0.038 Sum_probs=75.9
Q ss_pred ChHHHHHHHH-h-CCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAAD-A-AGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~-~-~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
||+..++.+. . ++++|+++.+........-. ...+++.+ .|+++.+++ ..+| +|+-.|-|..-.+.+..|
T Consensus 24 ~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~--~~~~~~~~--~~~~~ll~~---~~~D-~V~i~tp~~~h~~~~~~a 95 (354)
T 3q2i_A 24 IANNHFGALEKHADRAELIDVCDIDPAALKAAV--ERTGARGH--ASLTDMLAQ---TDAD-IVILTTPSGLHPTQSIEC 95 (354)
T ss_dssp THHHHHHHHHHTTTTEEEEEEECSSHHHHHHHH--HHHCCEEE--SCHHHHHHH---CCCS-EEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHH--HHcCCcee--CCHHHHhcC---CCCC-EEEECCCcHHHHHHHHHH
Confidence 7888888776 4 68999988775432111100 11134444 477776653 3678 788899999999999999
Q ss_pred HhcCCCeEEecC-CCCHHHHHH---HHHccCCcEEEccc--hhHHHHHHHH
Q 024671 79 SKVGVPFVMGTT-GGDRVRLHE---TIENSNVYAVISPQ--MGKQVVAFLA 123 (264)
Q Consensus 79 ~~~g~plViGTT-G~~~~~~~~---l~~~~~~~~v~s~N--fSlGv~ll~~ 123 (264)
++.|+++++-.. ..+.++.++ ++++++..+....| |+=.+..+.+
T Consensus 96 l~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~ 146 (354)
T 3q2i_A 96 SEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKR 146 (354)
T ss_dssp HHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSHHHHHHHH
T ss_pred HHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCHHHHHHHH
Confidence 999999999766 566655444 45556677777777 4444433333
No 37
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=95.47 E-value=0.056 Score=49.00 Aligned_cols=115 Identities=12% Similarity=0.006 Sum_probs=75.0
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHH
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (264)
||+..++.+. .++++|+++.+........-. ...+++. ..|+++.++ +..+| +|+..|-+..-.+.+..|+
T Consensus 16 ~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~--~~~g~~~--~~~~~~~l~---~~~~D-~V~i~tp~~~h~~~~~~al 87 (354)
T 3db2_A 16 WAYVMADAYTKSEKLKLVTCYSRTEDKREKFG--KRYNCAG--DATMEALLA---REDVE-MVIITVPNDKHAEVIEQCA 87 (354)
T ss_dssp HHHHHHHHHTTCSSEEEEEEECSSHHHHHHHH--HHHTCCC--CSSHHHHHH---CSSCC-EEEECSCTTSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEECCCHHHHHHHH--HHcCCCC--cCCHHHHhc---CCCCC-EEEEeCChHHHHHHHHHHH
Confidence 5777887776 469999988775432111100 0113333 357777664 23578 7899999999999999999
Q ss_pred hcCCCeEEecC-CCCHHHHHH---HHHccCCcEEEccch--hHHHHHHHH
Q 024671 80 KVGVPFVMGTT-GGDRVRLHE---TIENSNVYAVISPQM--GKQVVAFLA 123 (264)
Q Consensus 80 ~~g~plViGTT-G~~~~~~~~---l~~~~~~~~v~s~Nf--SlGv~ll~~ 123 (264)
+.|+++++-.. +.+.++.++ ++++.++.+....|+ +-.+..+.+
T Consensus 88 ~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~~~k~ 137 (354)
T 3db2_A 88 RSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKE 137 (354)
T ss_dssp HTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSHHHHHHHH
T ss_pred HcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeechhcCHHHHHHHH
Confidence 99999998765 566665444 455566777777774 444433333
No 38
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=95.45 E-value=0.081 Score=48.18 Aligned_cols=114 Identities=10% Similarity=0.056 Sum_probs=73.6
Q ss_pred ChHH-HHHHHH-hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKA-VIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~-i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
||+. .+..+. .++++|+++.+.......+..+ +++++ .|+++.+++ ..+| +|+-.|-+..-.+.+..|
T Consensus 16 ~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~----~~~~~--~~~~~ll~~---~~vD-~V~i~tp~~~H~~~~~~a 85 (362)
T 3fhl_A 16 SGQVFHAPFISTNPHFELYKIVERSKELSKERYP----QASIV--RSFKELTED---PEID-LIVVNTPDNTHYEYAGMA 85 (362)
T ss_dssp HHHHTTHHHHHHCTTEEEEEEECSSCCGGGTTCT----TSEEE--SCSHHHHTC---TTCC-EEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCeEEEEEEcCCHHHHHHhCC----CCceE--CCHHHHhcC---CCCC-EEEEeCChHHHHHHHHHH
Confidence 4554 455555 5799999988755432211111 34444 466666652 3578 789999999999999999
Q ss_pred HhcCCCeEEecC-CCCHHHHHH---HHHccCCcEEEccc--hhHHHHHHHHH
Q 024671 79 SKVGVPFVMGTT-GGDRVRLHE---TIENSNVYAVISPQ--MGKQVVAFLAA 124 (264)
Q Consensus 79 ~~~g~plViGTT-G~~~~~~~~---l~~~~~~~~v~s~N--fSlGv~ll~~~ 124 (264)
++.|+++++=-. ..+.++.++ +++++++.+....| |+=.+..+.++
T Consensus 86 l~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~ 137 (362)
T 3fhl_A 86 LEAGKNVVVEKPFTSTTKQGEELIALAKKKGLMLSVYQNRRWDADFLTVRDI 137 (362)
T ss_dssp HHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHH
T ss_pred HHCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEEEEecceeCHHHHHHHHH
Confidence 999999998655 456555444 45556677777777 44444443333
No 39
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=95.37 E-value=0.04 Score=50.12 Aligned_cols=116 Identities=7% Similarity=-0.051 Sum_probs=73.2
Q ss_pred ChH-HHHHHHH-hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGK-AVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~-~i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
||+ ..++.+. .++++|+++.+...... +.. ....+++.+ .|+++.+++ ..+| +|+-.|-+..-.+.+..|
T Consensus 38 ~g~~~~~~~l~~~~~~~l~av~d~~~~~~-~~~-a~~~g~~~~--~~~~~ll~~---~~~D-~V~i~tp~~~h~~~~~~a 109 (350)
T 3rc1_A 38 IAWRRALPALEAEPLTEVTAIASRRWDRA-KRF-TERFGGEPV--EGYPALLER---DDVD-AVYVPLPAVLHAEWIDRA 109 (350)
T ss_dssp HHHHTHHHHHHHCTTEEEEEEEESSHHHH-HHH-HHHHCSEEE--ESHHHHHTC---TTCS-EEEECCCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEEEEcCCHHHH-HHH-HHHcCCCCc--CCHHHHhcC---CCCC-EEEECCCcHHHHHHHHHH
Confidence 566 5666666 57899998877543211 110 011244554 466666642 3578 788899999999999999
Q ss_pred HhcCCCeEEecC-CCCHHHHHH---HHHccCCcEEEccc--hhHHHHHHHHH
Q 024671 79 SKVGVPFVMGTT-GGDRVRLHE---TIENSNVYAVISPQ--MGKQVVAFLAA 124 (264)
Q Consensus 79 ~~~g~plViGTT-G~~~~~~~~---l~~~~~~~~v~s~N--fSlGv~ll~~~ 124 (264)
++.|+++++=.. +.+.++.++ +++++++.+....| |.=.+..+.++
T Consensus 110 l~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~ 161 (350)
T 3rc1_A 110 LRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADM 161 (350)
T ss_dssp HHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHH
T ss_pred HHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEecccCCHHHHHHHHH
Confidence 999999888554 456655444 45555666666665 44444444443
No 40
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=95.31 E-value=0.032 Score=50.45 Aligned_cols=107 Identities=7% Similarity=0.011 Sum_probs=71.3
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCCccccccccccCceeE-eecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQ-VHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~-i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
||+..++.+. .++++|+++.+..+... +.. ....+++ ++ .|+++.+++ ..+| +|+-.|-|..-.+.+..|
T Consensus 13 ~g~~~~~~l~~~~~~~l~av~d~~~~~~-~~~-~~~~~~~~~~--~~~~~ll~~---~~~D-~V~i~tp~~~h~~~~~~a 84 (344)
T 3ezy_A 13 IGTIHAENLKMIDDAILYAISDVREDRL-REM-KEKLGVEKAY--KDPHELIED---PNVD-AVLVCSSTNTHSELVIAC 84 (344)
T ss_dssp HHHHHHHHGGGSTTEEEEEEECSCHHHH-HHH-HHHHTCSEEE--SSHHHHHHC---TTCC-EEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEECCCHHHH-HHH-HHHhCCCcee--CCHHHHhcC---CCCC-EEEEcCCCcchHHHHHHH
Confidence 5777777776 47899998877543211 111 0011222 33 466666642 3578 799999999999999999
Q ss_pred HhcCCCeEEecC-CCCHHHHHH---HHHccCCcEEEccchh
Q 024671 79 SKVGVPFVMGTT-GGDRVRLHE---TIENSNVYAVISPQMG 115 (264)
Q Consensus 79 ~~~g~plViGTT-G~~~~~~~~---l~~~~~~~~v~s~NfS 115 (264)
++.|+++++-.. ..+.++.++ +++++++.+....|+-
T Consensus 85 l~~gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~R 125 (344)
T 3ezy_A 85 AKAKKHVFCEKPLSLNLADVDRMIEETKKADVILFTGFNRR 125 (344)
T ss_dssp HHTTCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEECGGG
T ss_pred HhcCCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEeeccc
Confidence 999999998876 567665444 4555667777777643
No 41
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=95.26 E-value=0.046 Score=51.08 Aligned_cols=80 Identities=18% Similarity=0.328 Sum_probs=57.4
Q ss_pred CCCEEEEECCChHHHHHHHHHHHhcCCCeEEecCCCCHH-----------HHHHHHHccCCcEEEccchhHHHHHHHHHH
Q 024671 57 YPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRV-----------RLHETIENSNVYAVISPQMGKQVVAFLAAM 125 (264)
Q Consensus 57 ~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGTTG~~~~-----------~~~~l~~~~~~~~v~s~NfSlGv~ll~~~~ 125 (264)
.+| +||..+-|..-...++.|++.|+++|. ||++... .+.+.++++++.++..+.|.-|+.-++ +
T Consensus 76 ~~D-vVin~ag~~~~~~v~~a~l~~g~~vvD-~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~G~~PG~~~l~--a 151 (405)
T 4ina_A 76 KPQ-IVLNIALPYQDLTIMEACLRTGVPYLD-TANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGSGFDPGVTNVF--C 151 (405)
T ss_dssp CCS-EEEECSCGGGHHHHHHHHHHHTCCEEE-SSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECCBTTTBHHHHH--H
T ss_pred CCC-EEEECCCcccChHHHHHHHHhCCCEEE-ecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcCCCCccHHHHH--H
Confidence 489 899999998888999999999999887 7675321 345566667888899999888865443 3
Q ss_pred HHHHHh-cCCCCCCCCEEEEee
Q 024671 126 EIMAEQ-FPGAFSGYSLQVLES 146 (264)
Q Consensus 126 ~~aa~~-l~~~~~~~dieI~E~ 146 (264)
..+++. +. +++.++.
T Consensus 152 ~~~~~~~~~------~i~~i~i 167 (405)
T 4ina_A 152 AYAQKHYFD------EIHEIDI 167 (405)
T ss_dssp HHHHHHTCS------EEEEEEE
T ss_pred HHHHHhccC------cccEEEE
Confidence 345553 43 4555554
No 42
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=95.23 E-value=0.087 Score=48.48 Aligned_cols=108 Identities=12% Similarity=0.026 Sum_probs=71.9
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHH
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (264)
||+..++.+. .++++|+++.+..+.....-. ...+++.+ .|+++.+++ ..+| +|+-.|-|..-.+.+..|+
T Consensus 14 ~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a--~~~g~~~~--~~~~ell~~---~~vD-~V~i~tp~~~H~~~~~~al 85 (387)
T 3moi_A 14 GSVLMAPAMRHHPDAQIVAACDPNEDVRERFG--KEYGIPVF--ATLAEMMQH---VQMD-AVYIASPHQFHCEHVVQAS 85 (387)
T ss_dssp HHTTHHHHHHHCTTEEEEEEECSCHHHHHHHH--HHHTCCEE--SSHHHHHHH---SCCS-EEEECSCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHH--HHcCCCeE--CCHHHHHcC---CCCC-EEEEcCCcHHHHHHHHHHH
Confidence 3555666666 578999998875432110000 01134444 477777653 3578 7899999999999999999
Q ss_pred hcCCCeEEecC-CCCHHHHH---HHHHccCCcEEEccchhH
Q 024671 80 KVGVPFVMGTT-GGDRVRLH---ETIENSNVYAVISPQMGK 116 (264)
Q Consensus 80 ~~g~plViGTT-G~~~~~~~---~l~~~~~~~~v~s~NfSl 116 (264)
+.|+++++-.. ..+.++.+ +++++.++.+....|+-.
T Consensus 86 ~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~R~ 126 (387)
T 3moi_A 86 EQGLHIIVEKPLTLSRDEADRMIEAVERAGVHLVVGTSRSH 126 (387)
T ss_dssp HTTCEEEECSCCCSCHHHHHHHHHHHHHHTCCEEECCCGGG
T ss_pred HCCCceeeeCCccCCHHHHHHHHHHHHHhCCeEEEEecccc
Confidence 99999998765 45665544 445556677777777544
No 43
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=95.22 E-value=0.13 Score=46.32 Aligned_cols=103 Identities=11% Similarity=0.026 Sum_probs=71.6
Q ss_pred ChH-HHHHHHH-hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGK-AVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~-~i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
||+ ..++.+. .++++|+++.+..... .+++.+ .|+++.+++. ..+| +|+-.|-+..-.+.+..|
T Consensus 36 ig~~~~~~~l~~~~~~~lvav~d~~~~~---------~g~~~~--~~~~~ll~~~--~~vD-~V~i~tp~~~H~~~~~~a 101 (330)
T 4ew6_A 36 IVRDQHLPSIAKNANFKLVATASRHGTV---------EGVNSY--TTIEAMLDAE--PSID-AVSLCMPPQYRYEAAYKA 101 (330)
T ss_dssp HHHHTHHHHHHHCTTEEEEEEECSSCCC---------TTSEEE--SSHHHHHHHC--TTCC-EEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEEEEeCChhh---------cCCCcc--CCHHHHHhCC--CCCC-EEEEeCCcHHHHHHHHHH
Confidence 355 4566666 5799999987754321 134554 4777776531 3578 789999999999999999
Q ss_pred HhcCCCeEEecC-CCCHHHHHH---HHHccCCcEEEccchhHH
Q 024671 79 SKVGVPFVMGTT-GGDRVRLHE---TIENSNVYAVISPQMGKQ 117 (264)
Q Consensus 79 ~~~g~plViGTT-G~~~~~~~~---l~~~~~~~~v~s~NfSlG 117 (264)
++.|+++++=.. +.+.++.++ +++++++.+..+.|+-..
T Consensus 102 l~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~ 144 (330)
T 4ew6_A 102 LVAGKHVFLEKPPGATLSEVADLEALANKQGASLFASWHSRYA 144 (330)
T ss_dssp HHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGS
T ss_pred HHcCCcEEEeCCCCCCHHHHHHHHHHHHhcCCeEEEEehhhcc
Confidence 999999998765 345555444 455566777777775543
No 44
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=95.18 E-value=0.09 Score=48.03 Aligned_cols=115 Identities=17% Similarity=0.133 Sum_probs=73.6
Q ss_pred ChHH-HHHHHH-hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKA-VIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~-i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
||+. ..+.+. .++++|+++.+......... ..++.++ .|+++.+++ ..+| +|+..|-+..-.+.+..|
T Consensus 18 ~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~----~~~~~~~--~~~~~ll~~---~~~D-~V~i~tp~~~H~~~~~~a 87 (364)
T 3e82_A 18 VGKTFHAPLIRSVPGLNLAFVASRDEEKVKRD----LPDVTVI--ASPEAAVQH---PDVD-LVVIASPNATHAPLARLA 87 (364)
T ss_dssp HHHHTHHHHHHTSTTEEEEEEECSCHHHHHHH----CTTSEEE--SCHHHHHTC---TTCS-EEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhh----CCCCcEE--CCHHHHhcC---CCCC-EEEEeCChHHHHHHHHHH
Confidence 4554 555565 47899998877544221111 1123444 466666642 3578 789999999999999999
Q ss_pred HhcCCCeEEecC-CCCHHHHHH---HHHccCCcEEEccc--hhHHHHHHHHHH
Q 024671 79 SKVGVPFVMGTT-GGDRVRLHE---TIENSNVYAVISPQ--MGKQVVAFLAAM 125 (264)
Q Consensus 79 ~~~g~plViGTT-G~~~~~~~~---l~~~~~~~~v~s~N--fSlGv~ll~~~~ 125 (264)
++.|+++++-.. ..+.++.++ +++++++.+....| |+=.+..+.+++
T Consensus 88 l~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i 140 (364)
T 3e82_A 88 LNAGKHVVVDKPFTLDMQEARELIALAEEKQRLLSVFHNRRWDSDYLGIRQVI 140 (364)
T ss_dssp HHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHH
T ss_pred HHCCCcEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEeecccCHHHHHHHHHH
Confidence 999999988654 456655444 45556677766777 444554444443
No 45
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=95.17 E-value=0.086 Score=49.55 Aligned_cols=109 Identities=10% Similarity=0.006 Sum_probs=68.6
Q ss_pred ChH-HHHHHHH-hCCCeEEEEEcCCCccc---cccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHH
Q 024671 1 MGK-AVIKAAD-AAGLELVPVSFGTEEES---GQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNA 75 (264)
Q Consensus 1 MG~-~i~~~~~-~~~~eLv~~~~~~~~~~---g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~ 75 (264)
||+ ..++.+. .++++|+++.+...... .+..++...++.+ ..|.++.+++ ..+| +|+..|-+..-.+.+
T Consensus 94 ~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~--~~~~~~ll~~---~~vD-~V~iatp~~~h~~~~ 167 (433)
T 1h6d_A 94 YALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYD--YSNFDKIAKD---PKID-AVYIILPNSLHAEFA 167 (433)
T ss_dssp HHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEEC--SSSGGGGGGC---TTCC-EEEECSCGGGHHHHH
T ss_pred HHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCcccccc--cCCHHHHhcC---CCCC-EEEEcCCchhHHHHH
Confidence 565 6666665 46899998877543211 0111111001223 2466655542 3578 899999999999999
Q ss_pred HHHHhcCCCeEEec-CCCCHHHHHH---HHHccCCcEEEccchh
Q 024671 76 ELYSKVGVPFVMGT-TGGDRVRLHE---TIENSNVYAVISPQMG 115 (264)
Q Consensus 76 ~~~~~~g~plViGT-TG~~~~~~~~---l~~~~~~~~v~s~NfS 115 (264)
..|++.|+++++-. ...+.++.++ ++++.++.+..+.|+-
T Consensus 168 ~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~R 211 (433)
T 1h6d_A 168 IRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANKKLMIGYRCH 211 (433)
T ss_dssp HHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTCCEEECCGGG
T ss_pred HHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCCeEEEEechh
Confidence 99999999988865 3566665444 4555567777777743
No 46
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=94.95 E-value=0.16 Score=46.91 Aligned_cols=85 Identities=11% Similarity=0.114 Sum_probs=58.9
Q ss_pred CCCeEEEEEcCCCcccccccc----ccCceeEeecCCchhhHHhhhhcCCCCEEEEEC---C--ChHHHHHHHHHHHhcC
Q 024671 12 AGLELVPVSFGTEEESGQKVE----VCGKEIQVHGLSDRESVLASVFDKYPNMIVVDY---T--VPAAVNGNAELYSKVG 82 (264)
Q Consensus 12 ~~~eLv~~~~~~~~~~g~~~~----~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDF---S--~p~~~~~~~~~~~~~g 82 (264)
+++++|+.+ ....|+|++ ....++++. +|++++++ ..||.++|=- + .|+...+.+..|+++|
T Consensus 49 ~~~~iVgvi---~~~~Gkd~ge~~~g~~~gipv~--~d~~~al~----~~~d~lvig~a~~gg~l~~~~~~~I~~Al~~G 119 (350)
T 2g0t_A 49 RLFKPVCVV---AEHEGKMASDFVKPVRYDVPVV--SSVEKAKE----MGAEVLIIGVSNPGGYLEEQIATLVKKALSLG 119 (350)
T ss_dssp SSEEEEEEE---SSCTTCBGGGTCC-CCSCCBEE--SSHHHHHH----TTCCEEEECCCSCCHHHHHHHHHHHHHHHHTT
T ss_pred CCCeEEEEe---ecCCCCcHHHhhCCCCCCceee--CCHHHHHh----cCCCEEEEEecCCCCCCCHHHHHHHHHHHHcC
Confidence 679999998 336677763 123467775 57888875 2589656643 3 5677889999999999
Q ss_pred CCeEEecCCC--CHHHHHHHHHccC
Q 024671 83 VPFVMGTTGG--DRVRLHETIENSN 105 (264)
Q Consensus 83 ~plViGTTG~--~~~~~~~l~~~~~ 105 (264)
+++|.|---+ +..++.+++++.+
T Consensus 120 ~nVvsglh~~l~~~pel~~~A~~~G 144 (350)
T 2g0t_A 120 MDVISGLHFKISQQTEFLKIAHENG 144 (350)
T ss_dssp CEEEECCCC--CCHHHHHHHHHHHT
T ss_pred CcEEeCChhhhhCCHHHHHHHHHCC
Confidence 9999987665 2346777776643
No 47
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=94.94 E-value=0.24 Score=44.39 Aligned_cols=111 Identities=13% Similarity=-0.017 Sum_probs=70.4
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhh-----hcCCCCEEEEECCChHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASV-----FDKYPNMIVVDYTVPAAVNGNA 75 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~-----~~~~~d~VvIDFS~p~~~~~~~ 75 (264)
||+..++.+.+.+.+|+++.+..+.. . ...-.-.+.+++ .+.++.++.+ .+..+| +|+-.|-+..=.+.+
T Consensus 15 i~~~h~~~l~~~~~~lvav~d~~~~~-~-~~~~~~~~~~~~--~~~~~ll~~~~~l~~~~~~vD-~V~I~tP~~~H~~~~ 89 (312)
T 3o9z_A 15 IAPRHLKAIKEVGGVLVASLDPATNV-G-LVDSFFPEAEFF--TEPEAFEAYLEDLRDRGEGVD-YLSIASPNHLHYPQI 89 (312)
T ss_dssp SHHHHHHHHHHTTCEEEEEECSSCCC-G-GGGGTCTTCEEE--SCHHHHHHHHHHHHHTTCCCS-EEEECSCGGGHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEEEcCCHHH-H-HHHhhCCCCcee--CCHHHHHHHhhhhcccCCCCc-EEEECCCchhhHHHH
Confidence 56777777776689999988754421 1 110001124444 3555555211 235678 788899899999999
Q ss_pred HHHHhcCCCeEEecC-CCCHHH---HHHHHHccCCcEEEccchhH
Q 024671 76 ELYSKVGVPFVMGTT-GGDRVR---LHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 76 ~~~~~~g~plViGTT-G~~~~~---~~~l~~~~~~~~v~s~NfSl 116 (264)
..|++.|+++++=-. ..+.++ +.+++++++..+....|+-.
T Consensus 90 ~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~ 134 (312)
T 3o9z_A 90 RMALRLGANALSEKPLVLWPEEIARLKELEARTGRRVYTVLQLRV 134 (312)
T ss_dssp HHHHHTTCEEEECSSSCSCHHHHHHHHHHHHHHCCCEEECCGGGG
T ss_pred HHHHHCCCeEEEECCCCCCHHHHHHHHHHHHHcCCEEEEEeehhc
Confidence 999999999887543 245554 44455566677777777543
No 48
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=94.90 E-value=0.18 Score=45.40 Aligned_cols=117 Identities=15% Similarity=0.062 Sum_probs=73.3
Q ss_pred ChHHHHHHHH-h-CCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAAD-A-AGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~-~-~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
||+..++.+. . ++++|+++.+..+.....-...-+....++ .|+++.+++ ..+| +|+-.|-+..-.+.+..|
T Consensus 13 ~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~--~~~~~ll~~---~~~D-~V~i~tp~~~h~~~~~~a 86 (344)
T 3mz0_A 13 IGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQYQLNATVY--PNDDSLLAD---ENVD-AVLVTSWGPAHESSVLKA 86 (344)
T ss_dssp HHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHHTTCCCEEE--SSHHHHHHC---TTCC-EEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCCCCeee--CCHHHHhcC---CCCC-EEEECCCchhHHHHHHHH
Confidence 6777887776 4 789999887754321110000001112333 477776652 3578 789999999999999999
Q ss_pred HhcCCCeEEecC-CCCHHHHHH---HHHccCCcE-EEccc--hhHHHHHHHH
Q 024671 79 SKVGVPFVMGTT-GGDRVRLHE---TIENSNVYA-VISPQ--MGKQVVAFLA 123 (264)
Q Consensus 79 ~~~g~plViGTT-G~~~~~~~~---l~~~~~~~~-v~s~N--fSlGv~ll~~ 123 (264)
++.|+++++=.. ..+.++.++ ++++.++.+ ....| |.=.+..+.+
T Consensus 87 l~~Gk~vl~EKP~a~~~~e~~~l~~~a~~~g~~~~~v~~~~r~~p~~~~~k~ 138 (344)
T 3mz0_A 87 IKAQKYVFCEKPLATTAEGCMRIVEEEIKVGKRLVQVGFMRRYDSGYVQLKE 138 (344)
T ss_dssp HHTTCEEEECSCSCSSHHHHHHHHHHHHHHSSCCEEECCGGGGSHHHHHHHH
T ss_pred HHCCCcEEEcCCCCCCHHHHHHHHHHHHHHCCEEEEEecccccCHHHHHHHH
Confidence 999999998655 556665444 455556666 56666 4444433333
No 49
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=94.75 E-value=0.12 Score=47.02 Aligned_cols=106 Identities=19% Similarity=0.094 Sum_probs=70.9
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHH
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (264)
||+..++.+. .++++|+++.+..+... +. ....+++++ .|+++.+++ ..+| +|+-.|-+..-.+.+..|+
T Consensus 16 ~g~~~~~~l~~~~~~~l~av~d~~~~~~-~~--a~~~g~~~~--~~~~~ll~~---~~~D-~V~i~tp~~~h~~~~~~al 86 (359)
T 3e18_A 16 MGSYHVTLASAADNLEVHGVFDILAEKR-EA--AAQKGLKIY--ESYEAVLAD---EKVD-AVLIATPNDSHKELAISAL 86 (359)
T ss_dssp HHHHHHHHHHTSTTEEEEEEECSSHHHH-HH--HHTTTCCBC--SCHHHHHHC---TTCC-EEEECSCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEEcCCHHHH-HH--HHhcCCcee--CCHHHHhcC---CCCC-EEEEcCCcHHHHHHHHHHH
Confidence 5777777776 47899998877543211 11 112234443 577776652 3578 7899999999999999999
Q ss_pred hcCCCeEEecC-CCCHHHH---HHHHHccCCcEEEccchh
Q 024671 80 KVGVPFVMGTT-GGDRVRL---HETIENSNVYAVISPQMG 115 (264)
Q Consensus 80 ~~g~plViGTT-G~~~~~~---~~l~~~~~~~~v~s~NfS 115 (264)
+.|+++++=-. ..+.++. .++++++++.+....|+-
T Consensus 87 ~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r 126 (359)
T 3e18_A 87 EAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQNRR 126 (359)
T ss_dssp HTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGG
T ss_pred HCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEeeec
Confidence 99999988543 4555544 445555667777777743
No 50
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=94.72 E-value=0.073 Score=48.49 Aligned_cols=114 Identities=11% Similarity=0.088 Sum_probs=72.0
Q ss_pred ChHH-HHHHHH-hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKA-VIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~-i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
||+. .++.+. .++++|+++.+.......... . +++++ .|+++.+++ ..+| +|+-.|-+..-.+.+..|
T Consensus 16 ~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~~--~--~~~~~--~~~~~ll~~---~~vD-~V~i~tp~~~H~~~~~~a 85 (358)
T 3gdo_A 16 SGSVFHGPLLDVLDEYQISKIMTSRTEEVKRDF--P--DAEVV--HELEEITND---PAIE-LVIVTTPSGLHYEHTMAC 85 (358)
T ss_dssp HHHHTTHHHHTTCTTEEEEEEECSCHHHHHHHC--T--TSEEE--SSTHHHHTC---TTCC-EEEECSCTTTHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhhC--C--CCceE--CCHHHHhcC---CCCC-EEEEcCCcHHHHHHHHHH
Confidence 3554 455555 478999988775432211111 1 23444 466666642 3578 789999889999999999
Q ss_pred HhcCCCeEEecC-CCCHHH---HHHHHHccCCcEEEccch--hHHHHHHHHH
Q 024671 79 SKVGVPFVMGTT-GGDRVR---LHETIENSNVYAVISPQM--GKQVVAFLAA 124 (264)
Q Consensus 79 ~~~g~plViGTT-G~~~~~---~~~l~~~~~~~~v~s~Nf--SlGv~ll~~~ 124 (264)
++.|+++++=-. ..+.++ +.++++++++.+....|+ +=.+..+.++
T Consensus 86 l~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~ 137 (358)
T 3gdo_A 86 IQAGKHVVMEKPMTATAEEGETLKRAADEKGVLLSVYHNRRWDNDFLTIKKL 137 (358)
T ss_dssp HHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGSHHHHHHHHH
T ss_pred HHcCCeEEEecCCcCCHHHHHHHHHHHHHcCCeEEEeeecccCHHHHHHHHH
Confidence 999999998654 455554 444555666777777774 4444333333
No 51
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=94.30 E-value=0.17 Score=45.59 Aligned_cols=116 Identities=10% Similarity=0.017 Sum_probs=70.7
Q ss_pred ChHH-HHHHH-H-hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHH
Q 024671 1 MGKA-VIKAA-D-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAEL 77 (264)
Q Consensus 1 MG~~-i~~~~-~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~ 77 (264)
||+. ....+ . .++++|+++.+..+... +... ...+++++ .|+++.+++ ..+| +|+-.|-+..-.+.+..
T Consensus 13 ~g~~~~~~~~~~~~~~~~l~av~d~~~~~~-~~~~-~~~~~~~~--~~~~~ll~~---~~~D-~V~i~tp~~~h~~~~~~ 84 (345)
T 3f4l_A 13 STTRYHLPYVLNRKDSWHVAHIFRRHAKPE-EQAP-IYSHIHFT--SDLDEVLND---PDVK-LVVVCTHADSHFEYAKR 84 (345)
T ss_dssp HHHHHTHHHHTTCTTTEEEEEEECSSCCGG-GGSG-GGTTCEEE--SCTHHHHTC---TTEE-EEEECSCGGGHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEcCCHhHH-HHHH-hcCCCceE--CCHHHHhcC---CCCC-EEEEcCChHHHHHHHHH
Confidence 4653 45523 4 57999999887544221 1110 01134554 466666642 2466 78888888888999999
Q ss_pred HHhcCCCeEEec-CCCCHHH---HHHHHHccCCcEEEccch--hHHHHHHHHH
Q 024671 78 YSKVGVPFVMGT-TGGDRVR---LHETIENSNVYAVISPQM--GKQVVAFLAA 124 (264)
Q Consensus 78 ~~~~g~plViGT-TG~~~~~---~~~l~~~~~~~~v~s~Nf--SlGv~ll~~~ 124 (264)
|++.|+++++=- -..+.++ +.++++++++.+....|+ .=.+..+.++
T Consensus 85 al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~ 137 (345)
T 3f4l_A 85 ALEAGKNVLVEKPFTPTLAQAKELFALAKSKGLTVTPYQNRRFDSCFLTAKKA 137 (345)
T ss_dssp HHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGCHHHHHHHHH
T ss_pred HHHcCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEechhcCHHHHHHHHH
Confidence 999999988743 1345554 444555566777777774 4444343433
No 52
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=94.26 E-value=0.37 Score=43.51 Aligned_cols=130 Identities=11% Similarity=0.032 Sum_probs=79.1
Q ss_pred ChH-HHHHHHH-hCCCeEEEEEcCCCccccccc--cccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHH
Q 024671 1 MGK-AVIKAAD-AAGLELVPVSFGTEEESGQKV--EVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAE 76 (264)
Q Consensus 1 MG~-~i~~~~~-~~~~eLv~~~~~~~~~~g~~~--~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~ 76 (264)
||+ ..+..+. .++++|+++.++.. .+.. .....+++++ .|+++.+++ ..+| +|+-.|-+..-.+.+.
T Consensus 13 ~g~~~~~~~l~~~~~~~l~av~d~~~---~~~~a~~~~~~~~~~~--~~~~~ll~~---~~~D-~V~i~tp~~~h~~~~~ 83 (349)
T 3i23_A 13 SANRYHLPYVMIRETLEVKTIFDLHV---NEKAAAPFKEKGVNFT--ADLNELLTD---PEIE-LITICTPAHTHYDLAK 83 (349)
T ss_dssp HHHHTTHHHHTTCTTEEEEEEECTTC---CHHHHHHHHTTTCEEE--SCTHHHHSC---TTCC-EEEECSCGGGHHHHHH
T ss_pred HHHHHHHHHHhhCCCeEEEEEECCCH---HHHHHHhhCCCCCeEE--CCHHHHhcC---CCCC-EEEEeCCcHHHHHHHH
Confidence 355 3455555 47899999877541 1111 0001234454 466766642 3578 7888998898999999
Q ss_pred HHHhcCCCeEEecC-CCCHHHH---HHHHHccCCcEEEccch--hHHHHHHHHHHHHHHHhcCCCCCCCCEEEEeec
Q 024671 77 LYSKVGVPFVMGTT-GGDRVRL---HETIENSNVYAVISPQM--GKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESH 147 (264)
Q Consensus 77 ~~~~~g~plViGTT-G~~~~~~---~~l~~~~~~~~v~s~Nf--SlGv~ll~~~~~~aa~~l~~~~~~~dieI~E~H 147 (264)
.|++.|+++++=.. ..+.++. .++++++++.+....|+ .=.+.-+.++++ ...++ ++.-++.+
T Consensus 84 ~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~--~g~iG------~i~~~~~~ 152 (349)
T 3i23_A 84 QAILAGKSVIVEKPFCDTLEHAEELFALGQEKGVVVMPYQNRRFDGDYLAMKQVVE--QGFLG------EINEVETH 152 (349)
T ss_dssp HHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHH--HTTTC------SEEEEEEE
T ss_pred HHHHcCCEEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEecccCCHHHHHHHHHHh--cCCCC------CEEEEEEE
Confidence 99999999998655 4555554 44555667777777774 444433333331 12343 56666655
No 53
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=94.18 E-value=0.21 Score=45.41 Aligned_cols=119 Identities=12% Similarity=0.059 Sum_probs=74.2
Q ss_pred ChHHHHHHHH-h-CCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAAD-A-AGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~-~-~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
||+..++.+. . ++++|+++.+..+.....-...-+.....+ .|+++.+++ ..+| +|+-.|-+..-.+.+..|
T Consensus 34 ~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~--~~~~~ll~~---~~~D-~V~i~tp~~~h~~~~~~a 107 (357)
T 3ec7_A 34 IGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKYAIEAKDY--NDYHDLIND---KDVE-VVIITASNEAHADVAVAA 107 (357)
T ss_dssp HHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHHTCCCEEE--SSHHHHHHC---TTCC-EEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhCCCCeee--CCHHHHhcC---CCCC-EEEEcCCcHHHHHHHHHH
Confidence 5777777776 4 789999987754422111110001113333 467766652 3578 788899999999999999
Q ss_pred HhcCCCeEEecC-CCCHHHHHH---HHHccCCcE-EEccc--hhHHHHHHHHHH
Q 024671 79 SKVGVPFVMGTT-GGDRVRLHE---TIENSNVYA-VISPQ--MGKQVVAFLAAM 125 (264)
Q Consensus 79 ~~~g~plViGTT-G~~~~~~~~---l~~~~~~~~-v~s~N--fSlGv~ll~~~~ 125 (264)
++.|+++++=.. ..+.++.++ +++++++.+ ....| |+=.+..+.+++
T Consensus 108 l~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~~v~~~~R~~p~~~~~k~~i 161 (357)
T 3ec7_A 108 LNANKYVFCEKPLAVTAADCQRVIEAEQKNGKRMVQIGFMRRYDKGYVQLKNII 161 (357)
T ss_dssp HHTTCEEEEESSSCSSHHHHHHHHHHHHHHTSCCEEEECGGGGSHHHHHHHHHH
T ss_pred HHCCCCEEeecCccCCHHHHHHHHHHHHHhCCeEEEEeecccCCHHHHHHHHHH
Confidence 999999998655 456655444 445556655 45666 444444444443
No 54
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=93.82 E-value=0.23 Score=39.73 Aligned_cols=101 Identities=14% Similarity=0.062 Sum_probs=65.0
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
||+.+++.+.+.|+++.. +++.. .|..+ .|++++. ++++ +. ..+| ++|=|+.|+.+.+.++.|.+
T Consensus 28 ~G~~~~~~L~~~G~~v~~-vnp~~--~g~~i----~G~~~~~--sl~e----l~-~~~D-lvii~vp~~~v~~v~~~~~~ 92 (145)
T 2duw_A 28 PSYRVMKYLLDQGYHVIP-VSPKV--AGKTL----LGQQGYA--TLAD----VP-EKVD-MVDVFRNSEAAWGVAQEAIA 92 (145)
T ss_dssp HHHHHHHHHHHHTCCEEE-ECSSS--TTSEE----TTEECCS--STTT----CS-SCCS-EEECCSCSTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHCCCEEEE-eCCcc--ccccc----CCeeccC--CHHH----cC-CCCC-EEEEEeCHHHHHHHHHHHHH
Confidence 688888888777888554 33321 11221 1455542 3222 21 2578 56667888999999999999
Q ss_pred cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHHH
Q 024671 81 VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQV 118 (264)
Q Consensus 81 ~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlGv 118 (264)
.|++.|+-.+|-..+++.+++++.++. ++-|| ++|+
T Consensus 93 ~g~~~i~i~~~~~~~~l~~~a~~~Gi~-~igpn-c~g~ 128 (145)
T 2duw_A 93 IGAKTLWLQLGVINEQAAVLAREAGLS-VVMDR-CPAI 128 (145)
T ss_dssp HTCCEEECCTTCCCHHHHHHHHTTTCE-EECSC-CHHH
T ss_pred cCCCEEEEcCChHHHHHHHHHHHcCCE-EEcCC-eeeE
Confidence 998877766665555666676665554 45677 7776
No 55
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=93.74 E-value=0.055 Score=51.61 Aligned_cols=140 Identities=11% Similarity=0.101 Sum_probs=85.7
Q ss_pred ChHHHHHHHHh----------CCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCCh-H
Q 024671 1 MGKAVIKAADA----------AGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVP-A 69 (264)
Q Consensus 1 MG~~i~~~~~~----------~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p-~ 69 (264)
||+.+++.+.+ .+++|+++.++..... +.. .. +..++ .|.++.++ +...| +|++.|-+ +
T Consensus 21 VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~-~~~-~~--~~~~~--~d~~ell~---d~diD-vVve~tp~~~ 90 (444)
T 3mtj_A 21 VGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKA-EAL-AG--GLPLT--TNPFDVVD---DPEID-IVVELIGGLE 90 (444)
T ss_dssp HHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHH-HHH-HT--TCCEE--SCTHHHHT---CTTCC-EEEECCCSST
T ss_pred HHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHh-hhh-cc--cCccc--CCHHHHhc---CCCCC-EEEEcCCCch
Confidence 46666655431 6899998877543210 111 11 12232 46666664 23567 89999975 8
Q ss_pred HHHHHHHHHHhcCCCeEEecCCCCHH---HHHHHHHccCCcEEEccchhHHHHHHHHHHHHHHHhcCCCCCCCCEEEEee
Q 024671 70 AVNGNAELYSKVGVPFVMGTTGGDRV---RLHETIENSNVYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLES 146 (264)
Q Consensus 70 ~~~~~~~~~~~~g~plViGTTG~~~~---~~~~l~~~~~~~~v~s~NfSlGv~ll~~~~~~aa~~l~~~~~~~dieI~E~ 146 (264)
...+.+..|+++|+++|+...+++.+ ++.+++++.++.+.+-++..-|.-++..+ -+.+. +- +|-+.
T Consensus 91 ~h~~~~~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~l~~Ea~V~~giPii~~L----relL~----~~--~Ig~I 160 (444)
T 3mtj_A 91 PARELVMQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVMVTFEAAVAGGIPIIKAL----REGLT----AN--RIEWL 160 (444)
T ss_dssp THHHHHHHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCCEECGGGSSTTSCHHHHH----HTTTT----TS--CEEEE
T ss_pred HHHHHHHHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCeEEEEEeeeCChHHHHHH----HHHHh----CC--CCceE
Confidence 89999999999999999987766544 45556666677777777766665554433 22332 21 33333
Q ss_pred cCCCCCCC-cHHHHHHHHHH
Q 024671 147 HQAGKLDT-SGTAKAVISCF 165 (264)
Q Consensus 147 HH~~K~Da-SGTAl~l~~~i 165 (264)
.. - |||+.-+...+
T Consensus 161 ~G-----IlnGT~nyilt~m 175 (444)
T 3mtj_A 161 AG-----IINGTSNFILSEM 175 (444)
T ss_dssp EE-----ECCHHHHHHHHHH
T ss_pred EE-----EEcCCcccccccC
Confidence 33 3 89988655444
No 56
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=93.43 E-value=0.05 Score=49.64 Aligned_cols=118 Identities=14% Similarity=0.086 Sum_probs=73.2
Q ss_pred ChHHHHHHHH-hC-------CCeEEEEEcCCCcccccccc---c----cCceeE-eec-CCchhhHHhhhhcCCCCEEEE
Q 024671 1 MGKAVIKAAD-AA-------GLELVPVSFGTEEESGQKVE---V----CGKEIQ-VHG-LSDRESVLASVFDKYPNMIVV 63 (264)
Q Consensus 1 MG~~i~~~~~-~~-------~~eLv~~~~~~~~~~g~~~~---~----~~~~i~-i~~-~~dl~~~l~~~~~~~~d~VvI 63 (264)
||+.+++.+. .+ +++|+++.++........+. . ...+++ ++. ..|.++.+ + ...| |||
T Consensus 17 VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ll-~---~~iD-vVv 91 (331)
T 3c8m_A 17 VGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDSLEYESISASEAL-A---RDFD-IVV 91 (331)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGGCCSEECCHHHHH-H---SSCS-EEE
T ss_pred HHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCcccccCCCCCHHHHh-C---CCCC-EEE
Confidence 5788888775 33 58999887754322111010 0 001111 110 11555555 2 3678 899
Q ss_pred ECCChH----HHHHHHHHHHhcCCCeEEecCCCCH---HHHHHHHHccCCcEEEccchhHHHHHHHH
Q 024671 64 DYTVPA----AVNGNAELYSKVGVPFVMGTTGGDR---VRLHETIENSNVYAVISPQMGKQVVAFLA 123 (264)
Q Consensus 64 DFS~p~----~~~~~~~~~~~~g~plViGTTG~~~---~~~~~l~~~~~~~~v~s~NfSlGv~ll~~ 123 (264)
|.|.+. ...+++..|+++|+++|+..-+... +++.++++++++.+.|.++..-|.-++..
T Consensus 92 ~~t~~~~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~gv~~~~ea~vg~giPii~~ 158 (331)
T 3c8m_A 92 DATPASADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNNRRIRYEATVAGGVPLFSF 158 (331)
T ss_dssp ECSCCCSSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHTCCEECGGGSSTTSCCHHH
T ss_pred ECCCCCCccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcCCEEEEEeecccccHHHHH
Confidence 999774 7888999999999999997555432 34555666667788888887777544443
No 57
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=93.28 E-value=0.24 Score=46.50 Aligned_cols=110 Identities=16% Similarity=0.098 Sum_probs=67.3
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCCcccccccc-cc--Cc-eeEeec--CCchhhHHhhhhcCCCCEEEEECCChHHHHH
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVE-VC--GK-EIQVHG--LSDRESVLASVFDKYPNMIVVDYTVPAAVNG 73 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~~~~g~~~~-~~--~~-~i~i~~--~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~ 73 (264)
||+..++.+. .++++|+++.+..+........ .. +. ...++. .+|.++.|++ ..+| +|+-.|-+..-.+
T Consensus 31 ~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll~~---~~vD-~V~i~tp~~~h~~ 106 (444)
T 2ixa_A 31 RGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNMLKD---KNID-AVFVSSPWEWHHE 106 (444)
T ss_dssp HHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHTTC---TTCC-EEEECCCGGGHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHhcC---CCCC-EEEEcCCcHHHHH
Confidence 5677777666 4789999987754421111000 00 11 133432 2266666542 3578 7888998888899
Q ss_pred HHHHHHhcCCCeEEecC-CCCHHH---HHHHHHccCCcEEEccch
Q 024671 74 NAELYSKVGVPFVMGTT-GGDRVR---LHETIENSNVYAVISPQM 114 (264)
Q Consensus 74 ~~~~~~~~g~plViGTT-G~~~~~---~~~l~~~~~~~~v~s~Nf 114 (264)
.+..|++.|+++++=-. ..+.++ +.++++++++.+.+..|+
T Consensus 107 ~~~~al~aGkhV~~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~ 151 (444)
T 2ixa_A 107 HGVAAMKAGKIVGMEVSGAITLEECWDYVKVSEQTGVPLMALENV 151 (444)
T ss_dssp HHHHHHHTTCEEEECCCCCSSHHHHHHHHHHHHHHCCCEEECCGG
T ss_pred HHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEecc
Confidence 99999999999888432 234444 444555566777666664
No 58
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=93.27 E-value=1.6 Score=39.04 Aligned_cols=110 Identities=10% Similarity=0.009 Sum_probs=70.2
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHh---hh---hcCCCCEEEEECCChHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLA---SV---FDKYPNMIVVDYTVPAAVNGN 74 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~---~~---~~~~~d~VvIDFS~p~~~~~~ 74 (264)
||+..++.+.+.+.+|+++.+..+.. . .......+.+++ .|.++.++ .+ .+..+| +|+-.|-+..=.+.
T Consensus 15 i~~~h~~~l~~~~~~lvav~d~~~~~-~-~~~~~~~~~~~~--~~~~~ll~~~~~l~~~~~~~vD-~V~I~tP~~~H~~~ 89 (318)
T 3oa2_A 15 IAPRHMRAIKDTGNCLVSAYDINDSV-G-IIDSISPQSEFF--TEFEFFLDHASNLKRDSATALD-YVSICSPNYLHYPH 89 (318)
T ss_dssp SHHHHHHHHHHTTCEEEEEECSSCCC-G-GGGGTCTTCEEE--SSHHHHHHHHHHHTTSTTTSCC-EEEECSCGGGHHHH
T ss_pred HHHHHHHHHHhCCCEEEEEEcCCHHH-H-HHHhhCCCCcEE--CCHHHHHHhhhhhhhccCCCCc-EEEECCCcHHHHHH
Confidence 56777777776689999988754321 1 111011134444 35665552 11 134678 78888888889999
Q ss_pred HHHHHhcCCCeEEecC-CCCHHHHHH---HHHccCCcEEEccchh
Q 024671 75 AELYSKVGVPFVMGTT-GGDRVRLHE---TIENSNVYAVISPQMG 115 (264)
Q Consensus 75 ~~~~~~~g~plViGTT-G~~~~~~~~---l~~~~~~~~v~s~NfS 115 (264)
+..|++.|+++++=-. ..+.++.++ ++++.+..+....|+-
T Consensus 90 ~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R 134 (318)
T 3oa2_A 90 IAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLYNILQLR 134 (318)
T ss_dssp HHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHTCCEEECCGGG
T ss_pred HHHHHHCCCeEEEECCCcCCHHHHHHHHHHHHHhCCEEEEEEhhh
Confidence 9999999999988654 345555444 4555667777777643
No 59
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=93.25 E-value=0.35 Score=45.36 Aligned_cols=106 Identities=11% Similarity=-0.049 Sum_probs=67.5
Q ss_pred ChHHHHHHHH-h-CCCeEEEEEcCCCccccccc-cccCc-eeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHH
Q 024671 1 MGKAVIKAAD-A-AGLELVPVSFGTEEESGQKV-EVCGK-EIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAE 76 (264)
Q Consensus 1 MG~~i~~~~~-~-~~~eLv~~~~~~~~~~g~~~-~~~~~-~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~ 76 (264)
||+..++.+. . ++++|+++.+..... .+.+ ..-+. .+.++ .|+++.+++ ..+| +|+-.|-+..-.+.+.
T Consensus 35 ~g~~~~~~l~~~~~~~~lvav~d~~~~~-~~~~a~~~g~~~~~~~--~~~~~ll~~---~~vD-~V~i~tp~~~H~~~~~ 107 (438)
T 3btv_A 35 AIKTHYPAILQLSSQFQITALYSPKIET-SIATIQRLKLSNATAF--PTLESFASS---STID-MIVIAIQVASHYEVVM 107 (438)
T ss_dssp TTTTHHHHHHHTTTTEEEEEEECSSHHH-HHHHHHHTTCTTCEEE--SSHHHHHHC---SSCS-EEEECSCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEEeCCHHH-HHHHHHHcCCCcceee--CCHHHHhcC---CCCC-EEEEeCCcHHHHHHHH
Confidence 5777777776 5 689999887754321 1111 00011 12233 466666642 3578 7888999999999999
Q ss_pred HHHhcC------CCeEEec-CCCCHHHHHHH---HHccCCcEEEccc
Q 024671 77 LYSKVG------VPFVMGT-TGGDRVRLHET---IENSNVYAVISPQ 113 (264)
Q Consensus 77 ~~~~~g------~plViGT-TG~~~~~~~~l---~~~~~~~~v~s~N 113 (264)
.|++.| +++++-- ...+.++.+++ ++++++.+....|
T Consensus 108 ~al~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~ 154 (438)
T 3btv_A 108 PLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAAAERGVQTIISLQ 154 (438)
T ss_dssp HHHHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHHHTTTCEEEEECG
T ss_pred HHHHCCCCcccceeEEecCcccCCHHHHHHHHHHHHHcCCeEEEecc
Confidence 999999 9999874 44566655554 4445555555555
No 60
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=92.76 E-value=0.16 Score=46.51 Aligned_cols=86 Identities=17% Similarity=0.157 Sum_probs=53.7
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHh-----------hhhcCCCCEEEEECCCh
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLA-----------SVFDKYPNMIVVDYTVP 68 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~-----------~~~~~~~d~VvIDFS~p 68 (264)
||+.+++.+. .++++|++..+........... ..+++++...+.++.+. ++. ..+| +|+|+|-+
T Consensus 12 iG~~~~r~L~~~p~~elvav~d~~~~~~~~~a~--~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~-~~vD-vV~~aTp~ 87 (340)
T 1b7g_O 12 IGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAH--RRGIRIYVPQQSIKKFEESGIPVAGTVEDLI-KTSD-IVVDTTPN 87 (340)
T ss_dssp HHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHH--HTTCCEECCGGGHHHHHTTTCCCCCCHHHHH-HHCS-EEEECCST
T ss_pred HHHHHHHHHHcCCCCEEEEEEcCChHHHHHHHH--hcCcceecCcCHHHHhcccccccccCHhHhh-cCCC-EEEECCCC
Confidence 6999999987 5899999987643211111100 00223322112222121 111 1478 89999999
Q ss_pred HHHHHHHHHHHhcCCCeEEecC
Q 024671 69 AAVNGNAELYSKVGVPFVMGTT 90 (264)
Q Consensus 69 ~~~~~~~~~~~~~g~plViGTT 90 (264)
....++.+.+.+.|+++|.=+.
T Consensus 88 ~~s~~~a~~~~~aG~kvV~~sa 109 (340)
T 1b7g_O 88 GVGAQYKPIYLQLQRNAIFQGG 109 (340)
T ss_dssp THHHHHHHHHHHTTCEEEECTT
T ss_pred chhHHHHHHHHHcCCeEEEeCC
Confidence 9999999999999999887543
No 61
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=92.75 E-value=0.45 Score=42.81 Aligned_cols=107 Identities=16% Similarity=0.008 Sum_probs=67.8
Q ss_pred ChHHHHHHHH-h-CCCeEEEEEcCCCccccccccccCcee-EeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHH
Q 024671 1 MGKAVIKAAD-A-AGLELVPVSFGTEEESGQKVEVCGKEI-QVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAEL 77 (264)
Q Consensus 1 MG~~i~~~~~-~-~~~eLv~~~~~~~~~~g~~~~~~~~~i-~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~ 77 (264)
||+..++.+. . ++++|+++.+..+... +.. ....++ +++ .|+++.+++ ..+| +|+-.|-+..-.+.+..
T Consensus 30 ~g~~~~~~l~~~~~~~~lvav~d~~~~~~-~~~-a~~~~~~~~~--~~~~~ll~~---~~vD-~V~i~tp~~~H~~~~~~ 101 (340)
T 1zh8_A 30 ARELHLPALKNLSHLFEITAVTSRTRSHA-EEF-AKMVGNPAVF--DSYEELLES---GLVD-AVDLTLPVELNLPFIEK 101 (340)
T ss_dssp HHHTHHHHHHTTTTTEEEEEEECSSHHHH-HHH-HHHHSSCEEE--SCHHHHHHS---SCCS-EEEECCCGGGHHHHHHH
T ss_pred HHHHHHHHHHhCCCceEEEEEEcCCHHHH-HHH-HHHhCCCccc--CCHHHHhcC---CCCC-EEEEeCCchHHHHHHHH
Confidence 3556666666 4 6899998877543211 110 000122 343 467776652 3578 68888888888999999
Q ss_pred HHhcCCCeEEecC-CCCHHHH---HHHHHccCCcEEEccchh
Q 024671 78 YSKVGVPFVMGTT-GGDRVRL---HETIENSNVYAVISPQMG 115 (264)
Q Consensus 78 ~~~~g~plViGTT-G~~~~~~---~~l~~~~~~~~v~s~NfS 115 (264)
|++.|+++++=-. ..+.++. .++++++++.+....|+-
T Consensus 102 al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R 143 (340)
T 1zh8_A 102 ALRKGVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFR 143 (340)
T ss_dssp HHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGG
T ss_pred HHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 9999999988654 2455554 444555667777766643
No 62
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=92.59 E-value=0.57 Score=42.50 Aligned_cols=110 Identities=13% Similarity=0.049 Sum_probs=69.7
Q ss_pred ChHH-HHHHHH-hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKA-VIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~-i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
||+. .++.+. .++.+|+++.+..+.....-... -.+..++ .|+++.+++ ..+| +|+-.|-+..-.+.+..|
T Consensus 16 ~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~-~~~~~~~--~~~~~ll~~---~~vD-~V~i~tp~~~H~~~~~~a 88 (359)
T 3m2t_A 16 QMQENLLPSLLQMQDIRIVAACDSDLERARRVHRF-ISDIPVL--DNVPAMLNQ---VPLD-AVVMAGPPQLHFEMGLLA 88 (359)
T ss_dssp HHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGT-SCSCCEE--SSHHHHHHH---SCCS-EEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHh-cCCCccc--CCHHHHhcC---CCCC-EEEEcCCcHHHHHHHHHH
Confidence 3553 566666 47899998877543211111100 0022333 477777653 3578 788899999999999999
Q ss_pred HhcCCCeEEecC-CCCHHHHH---HHHHccCCcEEEccchhHH
Q 024671 79 SKVGVPFVMGTT-GGDRVRLH---ETIENSNVYAVISPQMGKQ 117 (264)
Q Consensus 79 ~~~g~plViGTT-G~~~~~~~---~l~~~~~~~~v~s~NfSlG 117 (264)
++.|+++++=-. ..+.++.+ ++++++++.+....|+-..
T Consensus 89 l~aGkhVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~R~~ 131 (359)
T 3m2t_A 89 MSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGVGMNFKFA 131 (359)
T ss_dssp HHTTCEEEECSCSCSSHHHHHHHHHHHHHHTCCEEECCHHHHC
T ss_pred HHCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEEecccCc
Confidence 999999887544 35555544 4455566777777775443
No 63
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=92.03 E-value=0.58 Score=41.90 Aligned_cols=98 Identities=8% Similarity=-0.030 Sum_probs=59.9
Q ss_pred hCCCeEEEEEcCCC-ccccccccc-c--CceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeE
Q 024671 11 AAGLELVPVSFGTE-EESGQKVEV-C--GKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFV 86 (264)
Q Consensus 11 ~~~~eLv~~~~~~~-~~~g~~~~~-~--~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plV 86 (264)
.++++|+++.+..+ ....+-... . +.+.+++ .|+++.+++ ..+| +|+-.|-+..=.+.+..|++.|++++
T Consensus 22 ~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ll~~---~~vD-~V~I~tp~~~H~~~~~~al~aGkhVl 95 (337)
T 3ip3_A 22 DEECSITGIAPGVPEEDLSKLEKAISEMNIKPKKY--NNWWEMLEK---EKPD-ILVINTVFSLNGKILLEALERKIHAF 95 (337)
T ss_dssp CTTEEEEEEECSSTTCCCHHHHHHHHTTTCCCEEC--SSHHHHHHH---HCCS-EEEECSSHHHHHHHHHHHHHTTCEEE
T ss_pred CCCcEEEEEecCCchhhHHHHHHHHHHcCCCCccc--CCHHHHhcC---CCCC-EEEEeCCcchHHHHHHHHHHCCCcEE
Confidence 67899999887543 111111111 0 1122443 577777764 3578 67778888888999999999999977
Q ss_pred EecC-CCCHHH---HHHHHHccCCc--EEEccch
Q 024671 87 MGTT-GGDRVR---LHETIENSNVY--AVISPQM 114 (264)
Q Consensus 87 iGTT-G~~~~~---~~~l~~~~~~~--~v~s~Nf 114 (264)
+=-. ..+.++ +.++++++++. +....|+
T Consensus 96 ~EKPla~~~~ea~~l~~~a~~~g~~~~~~v~~~~ 129 (337)
T 3ip3_A 96 VEKPIATTFEDLEKIRSVYQKVRNEVFFTAMFGI 129 (337)
T ss_dssp ECSSSCSSHHHHHHHHHHHHHHTTTCCEEECCGG
T ss_pred EeCCCCCCHHHHHHHHHHHHHhCCceEEEecccc
Confidence 6322 234444 44556666776 5555553
No 64
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=92.01 E-value=0.22 Score=45.51 Aligned_cols=84 Identities=21% Similarity=0.299 Sum_probs=53.4
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCCc----ccccc---c---------cccCceeEeecCCchhhHHhhhhcCCCCEEEE
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTEE----ESGQK---V---------EVCGKEIQVHGLSDRESVLASVFDKYPNMIVV 63 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~~----~~g~~---~---------~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvI 63 (264)
||+.+++.+. +++++|++..+..+. ..+++ . ...+.++.+. .+.++.+ ..+| +|+
T Consensus 12 iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~--~~~~~~~-----~~vD-vV~ 83 (337)
T 1cf2_P 12 VGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVA--GTVDDML-----DEAD-IVI 83 (337)
T ss_dssp THHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCC--EEHHHHH-----HTCS-EEE
T ss_pred HHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEc--CCHHHHh-----cCCC-EEE
Confidence 7999999988 589999987664321 11221 0 0000112221 1333333 2578 899
Q ss_pred ECCChHHHHHHHHHHHhcCCCeEEecCCCC
Q 024671 64 DYTVPAAVNGNAELYSKVGVPFVMGTTGGD 93 (264)
Q Consensus 64 DFS~p~~~~~~~~~~~~~g~plViGTTG~~ 93 (264)
++|-+....++.+.+++.|+++|+ .++-.
T Consensus 84 ~atp~~~~~~~a~~~l~aG~~VId-~sp~~ 112 (337)
T 1cf2_P 84 DCTPEGIGAKNLKMYKEKGIKAIF-QGGEK 112 (337)
T ss_dssp ECCSTTHHHHHHHHHHHHTCCEEE-CTTSC
T ss_pred ECCCchhhHHHHHHHHHcCCEEEE-ecCCC
Confidence 999999999999999999998555 44433
No 65
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=91.95 E-value=0.48 Score=41.79 Aligned_cols=106 Identities=8% Similarity=0.024 Sum_probs=68.2
Q ss_pred ChHH-HHHHHH-hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKA-VIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~-i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
||+. .++.+. .++.+|+++.+..+.....-. ...+++. ..|+++.++ .+| +|+-.|-+..-.+.+..|
T Consensus 17 ~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a--~~~~~~~--~~~~~~ll~-----~~D-~V~i~tp~~~h~~~~~~a 86 (308)
T 3uuw_A 17 IAQKAYLPILTKSERFEFVGAFTPNKVKREKIC--SDYRIMP--FDSIESLAK-----KCD-CIFLHSSTETHYEIIKIL 86 (308)
T ss_dssp HHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHH--HHHTCCB--CSCHHHHHT-----TCS-EEEECCCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHH--HHcCCCC--cCCHHHHHh-----cCC-EEEEeCCcHhHHHHHHHH
Confidence 5664 666666 478999988775432111000 0112333 346666553 588 788899999999999999
Q ss_pred HhcCCCeEEe-cCCCCHHHHHH---HHHccCCcEEEccchhH
Q 024671 79 SKVGVPFVMG-TTGGDRVRLHE---TIENSNVYAVISPQMGK 116 (264)
Q Consensus 79 ~~~g~plViG-TTG~~~~~~~~---l~~~~~~~~v~s~NfSl 116 (264)
++.|+++++= -.+.+.++.++ +++++++.+...-|+-.
T Consensus 87 l~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~ 128 (308)
T 3uuw_A 87 LNLGVHVYVDKPLASTVSQGEELIELSTKKNLNLMVGFNRRF 128 (308)
T ss_dssp HHTTCEEEECSSSSSSHHHHHHHHHHHHHHTCCEEECCGGGG
T ss_pred HHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCCEEEEeecccc
Confidence 9999997775 34456665444 45555677777777544
No 66
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=91.94 E-value=0.15 Score=37.65 Aligned_cols=85 Identities=11% Similarity=0.014 Sum_probs=46.9
Q ss_pred ChHHHHHHHHhCC-CeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAG-LELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (264)
Q Consensus 1 MG~~i~~~~~~~~-~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (264)
||+.+++.+.+.| ++++. +++.+.... .....+.........+.+. +.+.. ..+| ++|+.+-+......++.|.
T Consensus 16 iG~~~~~~l~~~g~~~v~~-~~r~~~~~~-~~~~~~~~~~~~d~~~~~~-~~~~~-~~~d-~vi~~~~~~~~~~~~~~~~ 90 (118)
T 3ic5_A 16 IGQMIAALLKTSSNYSVTV-ADHDLAALA-VLNRMGVATKQVDAKDEAG-LAKAL-GGFD-AVISAAPFFLTPIIAKAAK 90 (118)
T ss_dssp HHHHHHHHHHHCSSEEEEE-EESCHHHHH-HHHTTTCEEEECCTTCHHH-HHHHT-TTCS-EEEECSCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCceEEE-EeCCHHHHH-HHHhCCCcEEEecCCCHHH-HHHHH-cCCC-EEEECCCchhhHHHHHHHH
Confidence 6899999888778 77764 444321110 0000011111111112222 22222 2578 7888887788888888888
Q ss_pred hcCCCeEEecC
Q 024671 80 KVGVPFVMGTT 90 (264)
Q Consensus 80 ~~g~plViGTT 90 (264)
+.|++.+.-|+
T Consensus 91 ~~g~~~~~~~~ 101 (118)
T 3ic5_A 91 AAGAHYFDLTE 101 (118)
T ss_dssp HTTCEEECCCS
T ss_pred HhCCCEEEecC
Confidence 88888776554
No 67
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=91.93 E-value=1.1 Score=40.76 Aligned_cols=104 Identities=11% Similarity=-0.004 Sum_probs=65.1
Q ss_pred HHHHHHhCCCeEEEEEcCCCccccccccccCce-eEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCC
Q 024671 5 VIKAADAAGLELVPVSFGTEEESGQKVEVCGKE-IQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGV 83 (264)
Q Consensus 5 i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~-i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~ 83 (264)
....+..++++|+++.+..+... +... ...+ ..++ .|+++.+++ ..+| +|+-.|-+..=.+.+..|++.|+
T Consensus 42 ~~~~~~~~~~~lvav~d~~~~~a-~~~a-~~~~~~~~~--~~~~~ll~~---~~vD-~V~I~tp~~~H~~~~~~al~aGk 113 (361)
T 3u3x_A 42 QVNCLLRAGARLAGFHEKDDALA-AEFS-AVYADARRI--ATAEEILED---ENIG-LIVSAAVSSERAELAIRAMQHGK 113 (361)
T ss_dssp HHHHHHHTTCEEEEEECSCHHHH-HHHH-HHSSSCCEE--SCHHHHHTC---TTCC-EEEECCCHHHHHHHHHHHHHTTC
T ss_pred HHHHhhcCCcEEEEEEcCCHHHH-HHHH-HHcCCCccc--CCHHHHhcC---CCCC-EEEEeCChHHHHHHHHHHHHCCC
Confidence 34444468999999887543211 1110 0011 2333 477766652 3578 67878888888999999999999
Q ss_pred CeEEecC-CCCHHH---HHHHHHccCCcEEEccchhH
Q 024671 84 PFVMGTT-GGDRVR---LHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 84 plViGTT-G~~~~~---~~~l~~~~~~~~v~s~NfSl 116 (264)
++++=-. ..+.++ +.++++++++.+....|+-.
T Consensus 114 hVl~EKPla~~~~ea~~l~~~a~~~g~~l~v~~~~R~ 150 (361)
T 3u3x_A 114 DVLVDKPGMTSFDQLAKLRRVQAETGRIFSILYSEHF 150 (361)
T ss_dssp EEEEESCSCSSHHHHHHHHHHHHTTCCCEEEECHHHH
T ss_pred eEEEeCCCCCCHHHHHHHHHHHHHcCCEEEEechHhh
Confidence 9988433 344444 44456666677777777543
No 68
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=91.90 E-value=0.18 Score=43.44 Aligned_cols=104 Identities=13% Similarity=0.115 Sum_probs=66.5
Q ss_pred ChHHHHHHHH--hCCCeEEEEEcCCCc-cccc-cccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHH
Q 024671 1 MGKAVIKAAD--AAGLELVPVSFGTEE-ESGQ-KVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAE 76 (264)
Q Consensus 1 MG~~i~~~~~--~~~~eLv~~~~~~~~-~~g~-~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~ 76 (264)
+|+++++... ..+++++|.+|..+. ..|+ .+ .|++|.+.+++++.+++ ...| ++|=.+-.....+..+
T Consensus 95 lG~aLa~~~~~~~~g~~iVg~~D~dp~~kiG~~~i----~GvpV~~~~dL~~~v~~---~~Id-~vIIAvPs~~aq~v~d 166 (212)
T 3keo_A 95 IGRALLHYRFHDRNKMQISMAFDLDSNDLVGKTTE----DGIPVYGISTINDHLID---SDIE-TAILTVPSTEAQEVAD 166 (212)
T ss_dssp HHHHHTTCCCCTTSSEEEEEEEECTTSTTTTCBCT----TCCBEEEGGGHHHHC-C---CSCC-EEEECSCGGGHHHHHH
T ss_pred HHHHHHHhhhcccCCeEEEEEEeCCchhccCceeE----CCeEEeCHHHHHHHHHH---cCCC-EEEEecCchhHHHHHH
Confidence 4777777642 468999999997766 6665 43 24677767787766542 3578 5555554455678999
Q ss_pred HHHhcCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHHHH
Q 024671 77 LYSKVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVV 119 (264)
Q Consensus 77 ~~~~~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlGv~ 119 (264)
.|.+.|++-+.-=| +-.+ .-..-..|..-+++..-.
T Consensus 167 ~lv~~GIk~I~nFa---p~~l----~vp~~v~v~~vdl~~~l~ 202 (212)
T 3keo_A 167 ILVKAGIKGILSFS---PVHL----TLPKDIIVQYVDLTSELQ 202 (212)
T ss_dssp HHHHHTCCEEEECS---SSCC----CCCTTSEEEECCHHHHHH
T ss_pred HHHHcCCCEEEEcC---Cccc----CCCCCcEEEEeCcHHHHH
Confidence 99999999887543 3222 012234566666666543
No 69
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=91.75 E-value=0.84 Score=35.19 Aligned_cols=24 Identities=4% Similarity=0.007 Sum_probs=18.2
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCC
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTE 24 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~ 24 (264)
+|+.+++.+. .++++++|.++..+
T Consensus 15 ~g~~l~~~l~~~~g~~vvg~~d~~~ 39 (141)
T 3nkl_A 15 AGLQLANMLRQGKEFHPIAFIDDDR 39 (141)
T ss_dssp HHHHHHHHHHHSSSEEEEEEECSCG
T ss_pred HHHHHHHHHHhCCCcEEEEEEECCc
Confidence 3678888886 46899999887543
No 70
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=91.25 E-value=0.93 Score=41.65 Aligned_cols=113 Identities=12% Similarity=-0.081 Sum_probs=67.7
Q ss_pred ChHHHHHHHH-hCCCeEEEEE-cCCCccccccccccCceeE-eecCCchhhHHhhhh--cCCCCEEEEECCChHHHHHHH
Q 024671 1 MGKAVIKAAD-AAGLELVPVS-FGTEEESGQKVEVCGKEIQ-VHGLSDRESVLASVF--DKYPNMIVVDYTVPAAVNGNA 75 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~-~~~~~~~g~~~~~~~~~i~-i~~~~dl~~~l~~~~--~~~~d~VvIDFS~p~~~~~~~ 75 (264)
||+.-+..+. .++++|++++ +..+... +.. ....+++ .....|.++.++... +..+| +|+-.|-+..=.+.+
T Consensus 26 ig~~h~~~~~~~~~~~lva~v~d~~~~~a-~~~-a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD-~V~i~tp~~~H~~~~ 102 (398)
T 3dty_A 26 IGYIHRCAALRDNTFVLVAGAFDIDPIRG-SAF-GEQLGVDSERCYADYLSMFEQEARRADGIQ-AVSIATPNGTHYSIT 102 (398)
T ss_dssp SHHHHHHHHHGGGSEEEEEEECCSSHHHH-HHH-HHHTTCCGGGBCSSHHHHHHHHTTCTTCCS-EEEEESCGGGHHHHH
T ss_pred hHHHHHHHHhhCCCeEEEEEEeCCCHHHH-HHH-HHHhCCCcceeeCCHHHHHhcccccCCCCC-EEEECCCcHHHHHHH
Confidence 5777776666 5679999844 4332111 111 0011231 011247777775421 12478 688888888889999
Q ss_pred HHHHhcCCCeEEecC-CCCHHH---HHHHHHccCCcEEEccchhH
Q 024671 76 ELYSKVGVPFVMGTT-GGDRVR---LHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 76 ~~~~~~g~plViGTT-G~~~~~---~~~l~~~~~~~~v~s~NfSl 116 (264)
..|++.|+++++=-. ..+.++ +.++++++++.+....|+-.
T Consensus 103 ~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~r~ 147 (398)
T 3dty_A 103 KAALEAGLHVVCEKPLCFTVEQAENLRELSHKHNRIVGVTYGYAG 147 (398)
T ss_dssp HHHHHTTCEEEECSCSCSCHHHHHHHHHHHHHTTCCEEECCGGGG
T ss_pred HHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCeEEEEecccC
Confidence 999999999888221 234444 44556666777877777654
No 71
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=91.01 E-value=0.7 Score=39.62 Aligned_cols=103 Identities=16% Similarity=0.188 Sum_probs=63.7
Q ss_pred ChHHHHHHH-H-hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHH
Q 024671 1 MGKAVIKAA-D-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAEL 77 (264)
Q Consensus 1 MG~~i~~~~-~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~ 77 (264)
||+++++.. . ..++++++.+|..+...|+.+ .++++...+++++.+. .. | ++| .+.|. ...+.++.
T Consensus 96 ~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i----~gv~V~~~~dl~eli~----~~-D-~Vi-IAvPs~~~~ei~~~ 164 (215)
T 2vt3_A 96 LGTAFLHYNFTKNNNTKISMAFDINESKIGTEV----GGVPVYNLDDLEQHVK----DE-S-VAI-LTVPAVAAQSITDR 164 (215)
T ss_dssp HHHHHHHCC------CCEEEEEESCTTTTTCEE----TTEEEEEGGGHHHHCS----SC-C-EEE-ECSCHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHh----cCCeeechhhHHHHHH----hC-C-EEE-EecCchhHHHHHHH
Confidence 588888853 3 578999999997665555443 1356666667666553 23 7 444 55554 55789999
Q ss_pred HHhcCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHHHHHH
Q 024671 78 YSKVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAF 121 (264)
Q Consensus 78 ~~~~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlGv~ll 121 (264)
|.+.|++.|.--|-.... ..+..+|..-|++..-..|
T Consensus 165 l~~aGi~~Ilnf~P~~l~-------vp~~v~v~~vdl~~~l~~l 201 (215)
T 2vt3_A 165 LVALGIKGILNFTPARLN-------VPEHIRIHHIDLAVELQSL 201 (215)
T ss_dssp HHHTTCCEEEECSSCCCC-------CCTTSEEEECCHHHHHHHH
T ss_pred HHHcCCCEEEEcCceecc-------CCCceEEEEeCcHHHHHHH
Confidence 999999988766554321 1223567777777764433
No 72
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=90.12 E-value=1.8 Score=38.67 Aligned_cols=107 Identities=13% Similarity=0.058 Sum_probs=65.2
Q ss_pred hHH-HHHHHH-hCCCeEEEEEcCCCccccccccccCceeE-eecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 2 GKA-VIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQ-VHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 2 G~~-i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~-i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
|+. ...++. .++.+|+++.+..+... +.. ....+++ ++ .|.++.|++ ..+| +|+=.|-|..=.+.+..|
T Consensus 35 g~~~~~~~~~~~~~~~lvav~d~~~~~a-~~~-a~~~g~~~~y--~d~~ell~~---~~iD-aV~I~tP~~~H~~~~~~a 106 (350)
T 4had_A 35 GRDNVVPAIQDAENCVVTAIASRDLTRA-REM-ADRFSVPHAF--GSYEEMLAS---DVID-AVYIPLPTSQHIEWSIKA 106 (350)
T ss_dssp HHHTHHHHHHHCSSEEEEEEECSSHHHH-HHH-HHHHTCSEEE--SSHHHHHHC---SSCS-EEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEEEEECCCHHHH-HHH-HHHcCCCeee--CCHHHHhcC---CCCC-EEEEeCCCchhHHHHHHH
Confidence 443 345555 57999999877543211 110 0011232 33 477776653 4578 566677777778999999
Q ss_pred HhcCCCeEEe----cCCCCHHHHHHHHHccCCcEEEccchhH
Q 024671 79 SKVGVPFVMG----TTGGDRVRLHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 79 ~~~g~plViG----TTG~~~~~~~~l~~~~~~~~v~s~NfSl 116 (264)
++.|+++.+= +|=-+.+++.++++++++.+....|+-.
T Consensus 107 l~aGkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~R~ 148 (350)
T 4had_A 107 ADAGKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAYMITY 148 (350)
T ss_dssp HHTTCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECCGGGG
T ss_pred HhcCCEEEEeCCcccchhhHHHHHHHHHHcCCceeEeeeeec
Confidence 9999998873 3211223566667777788888777443
No 73
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=90.10 E-value=0.56 Score=40.11 Aligned_cols=105 Identities=13% Similarity=0.041 Sum_probs=64.8
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHH
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (264)
||+.+++... ..+++++|.+|..+...|..+. ++++...+++++.+. + .+| ++|=-+-.....+.++.|.
T Consensus 91 ~G~~la~~~~~~~g~~iVg~~D~dp~k~g~~i~----gv~V~~~~dl~ell~---~-~ID-~ViIA~Ps~~~~ei~~~l~ 161 (211)
T 2dt5_A 91 LGSALADYPGFGESFELRGFFDVDPEKVGRPVR----GGVIEHVDLLPQRVP---G-RIE-IALLTVPREAAQKAADLLV 161 (211)
T ss_dssp HHHHHHHCSCCCSSEEEEEEEESCTTTTTCEET----TEEEEEGGGHHHHST---T-TCC-EEEECSCHHHHHHHHHHHH
T ss_pred HHHHHHHhHhhcCCcEEEEEEeCCHHHHhhhhc----CCeeecHHhHHHHHH---c-CCC-EEEEeCCchhHHHHHHHHH
Confidence 4777777532 2289999999866544454431 356655667666553 3 577 4444433344468999999
Q ss_pred hcCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHHHHHH
Q 024671 80 KVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAF 121 (264)
Q Consensus 80 ~~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlGv~ll 121 (264)
+.|++.|..-|-.... ..+..+|...+++.....|
T Consensus 162 ~aGi~~Ilnf~P~~l~-------vp~~v~v~~vdl~~~l~~l 196 (211)
T 2dt5_A 162 AAGIKGILNFAPVVLE-------VPKEVAVENVDFLAGLTRL 196 (211)
T ss_dssp HHTCCEEEECSSSCCC-------CCTTSEEEECCSHHHHHHH
T ss_pred HcCCCEEEECCccccc-------CCCCcEEEecCHHHHHHHH
Confidence 9999988764444210 1123478888888775433
No 74
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=89.52 E-value=1.2 Score=42.42 Aligned_cols=107 Identities=11% Similarity=0.002 Sum_probs=66.7
Q ss_pred ChHHHHHHHH-h-CCCeEEEEEcCCCccc---cccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHH
Q 024671 1 MGKAVIKAAD-A-AGLELVPVSFGTEEES---GQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNA 75 (264)
Q Consensus 1 MG~~i~~~~~-~-~~~eLv~~~~~~~~~~---g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~ 75 (264)
||+..++.+. . ++++|+++.+...... .+..++. .+.++ .|.++.+++ ..+| +|+-.|-+..-.+.+
T Consensus 54 ~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~~g~~--~~~~~--~d~~ell~~---~~vD-~V~I~tp~~~H~~~~ 125 (479)
T 2nvw_A 54 VAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLK--HATGF--DSLESFAQY---KDID-MIVVSVKVPEHYEVV 125 (479)
T ss_dssp HHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCT--TCEEE--SCHHHHHHC---TTCS-EEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHHcCCC--cceee--CCHHHHhcC---CCCC-EEEEcCCcHHHHHHH
Confidence 4666677776 4 7899998877543211 0111110 11233 466666642 3578 788888888889999
Q ss_pred HHHHhcC------CCeEEecC-CCCHHH---HHHHHHccC-CcEEEccchh
Q 024671 76 ELYSKVG------VPFVMGTT-GGDRVR---LHETIENSN-VYAVISPQMG 115 (264)
Q Consensus 76 ~~~~~~g------~plViGTT-G~~~~~---~~~l~~~~~-~~~v~s~NfS 115 (264)
..|++.| +++++=-. ..+.++ +.+++++++ +.+....|+-
T Consensus 126 ~~al~aG~~~~~~khVl~EKPla~~~~ea~~l~~~a~~~g~~~~~v~~~~R 176 (479)
T 2nvw_A 126 KNILEHSSQNLNLRYLYVEWALAASVQQAEELYSISQQRANLQTIICLQGR 176 (479)
T ss_dssp HHHHHHSSSCSSCCEEEEESSSSSSHHHHHHHHHHHHTCTTCEEEEECGGG
T ss_pred HHHHHCCCCcCCceeEEEeCCCcCCHHHHHHHHHHHHHcCCeEEEEEeccc
Confidence 9999999 88888552 345544 444555566 6666666643
No 75
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=89.15 E-value=1.7 Score=38.72 Aligned_cols=116 Identities=9% Similarity=0.053 Sum_probs=69.8
Q ss_pred ChHHHHHHHHh-C--CCeEEEEEcCCCccccccccccCceeE-eecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHH
Q 024671 1 MGKAVIKAADA-A--GLELVPVSFGTEEESGQKVEVCGKEIQ-VHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAE 76 (264)
Q Consensus 1 MG~~i~~~~~~-~--~~eLv~~~~~~~~~~g~~~~~~~~~i~-i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~ 76 (264)
||+..++.+.+ + +++|+++.++..... +.. ....+++ ++ .|+++.+++ ..+| +|+-.|-+..-.+.+.
T Consensus 13 ig~~~~~~l~~~~~~~~~l~av~d~~~~~a-~~~-a~~~~~~~~~--~~~~~ll~~---~~vD-~V~i~tp~~~H~~~~~ 84 (334)
T 3ohs_X 13 ISSDFTAVLQTLPRSEHQVVAVAARDLSRA-KEF-AQKHDIPKAY--GSYEELAKD---PNVE-VAYVGTQHPQHKAAVM 84 (334)
T ss_dssp HHHHHHHHHTTSCTTTEEEEEEECSSHHHH-HHH-HHHHTCSCEE--SSHHHHHHC---TTCC-EEEECCCGGGHHHHHH
T ss_pred HHHHHHHHHHhCCCCCeEEEEEEcCCHHHH-HHH-HHHcCCCccc--CCHHHHhcC---CCCC-EEEECCCcHHHHHHHH
Confidence 46666666653 3 478998877543211 110 0011232 33 466666652 3578 7888888888999999
Q ss_pred HHHhcCCCeEEecC-CCCHHHHHH---HHHccCCcEEEccch--hHHHHHHHHH
Q 024671 77 LYSKVGVPFVMGTT-GGDRVRLHE---TIENSNVYAVISPQM--GKQVVAFLAA 124 (264)
Q Consensus 77 ~~~~~g~plViGTT-G~~~~~~~~---l~~~~~~~~v~s~Nf--SlGv~ll~~~ 124 (264)
.|++.|+++++=-. ..+.++.++ ++++.++.+..+.|+ .=.+..+.++
T Consensus 85 ~al~~GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~~p~~~~~k~~ 138 (334)
T 3ohs_X 85 LCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSV 138 (334)
T ss_dssp HHHHTTCEEEEESSSSSSHHHHHHHHHHHHHTTCCEEEECGGGGSHHHHHHHHH
T ss_pred HHHhcCCEEEEECCCCCCHHHHHHHHHHHHHhCCEEEEEEhHhcCHHHHHHHHH
Confidence 99999999887544 345555444 455566777666664 4444333333
No 76
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=89.14 E-value=0.6 Score=42.35 Aligned_cols=83 Identities=23% Similarity=0.279 Sum_probs=51.6
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCCccccccc---ccc-------------CceeEeecCCchhhHHhhhhcCCCCEEEE
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKV---EVC-------------GKEIQVHGLSDRESVLASVFDKYPNMIVV 63 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~~~~g~~~---~~~-------------~~~i~i~~~~dl~~~l~~~~~~~~d~VvI 63 (264)
||+.+++.+. .++++|++..+..+...+... +.. +.++.++ .|.++.+. ..| +|+
T Consensus 13 iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~--~d~~~l~~-----~vD-vV~ 84 (334)
T 2czc_A 13 IGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVA--GTLNDLLE-----KVD-IIV 84 (334)
T ss_dssp HHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCS--CBHHHHHT-----TCS-EEE
T ss_pred HHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEc--CcHHHhcc-----CCC-EEE
Confidence 6899999887 578999988775432221111 000 0011222 35444432 578 788
Q ss_pred ECCChHHHHHHHHHHHhcCCCeEEecCCC
Q 024671 64 DYTVPAAVNGNAELYSKVGVPFVMGTTGG 92 (264)
Q Consensus 64 DFS~p~~~~~~~~~~~~~g~plViGTTG~ 92 (264)
+.|-+....+....+++.|++++ .....
T Consensus 85 ~aTp~~~h~~~a~~~l~aGk~Vi-~sap~ 112 (334)
T 2czc_A 85 DATPGGIGAKNKPLYEKAGVKAI-FQGGE 112 (334)
T ss_dssp ECCSTTHHHHHHHHHHHHTCEEE-ECTTS
T ss_pred ECCCccccHHHHHHHHHcCCceE-eeccc
Confidence 88877777899999999998855 44444
No 77
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=88.73 E-value=1.3 Score=41.00 Aligned_cols=114 Identities=16% Similarity=0.084 Sum_probs=68.1
Q ss_pred ChHHHHHHHH-hCCCeEEE-EEcCCCccccccccccCceeE-eecCCchhhHHhhhhc--CCCCEEEEECCChHHHHHHH
Q 024671 1 MGKAVIKAAD-AAGLELVP-VSFGTEEESGQKVEVCGKEIQ-VHGLSDRESVLASVFD--KYPNMIVVDYTVPAAVNGNA 75 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~-~~~~~~~~~g~~~~~~~~~i~-i~~~~dl~~~l~~~~~--~~~d~VvIDFS~p~~~~~~~ 75 (264)
||+.-...+. .++++|++ +.+..+... +.. ....+++ .....|.++.++.... ..+| +|+-.|-+..-.+.+
T Consensus 51 ig~~h~~~~~~~~~~~lva~v~d~~~~~a-~~~-a~~~g~~~~~~~~~~~~ll~~~~~~~~~vD-~V~I~tp~~~H~~~~ 127 (417)
T 3v5n_A 51 IGAVHRIAARLDDHYELVAGALSSTPEKA-EAS-GRELGLDPSRVYSDFKEMAIREAKLKNGIE-AVAIVTPNHVHYAAA 127 (417)
T ss_dssp HHHHHHHHHHHTSCEEEEEEECCSSHHHH-HHH-HHHHTCCGGGBCSCHHHHHHHHHHCTTCCS-EEEECSCTTSHHHHH
T ss_pred HHHHHHHHHhhCCCcEEEEEEeCCCHHHH-HHH-HHHcCCCcccccCCHHHHHhcccccCCCCc-EEEECCCcHHHHHHH
Confidence 4555565555 46799997 444332111 111 0011232 0112477777653110 2478 788888888899999
Q ss_pred HHHHhcCCCeEEecC-CCCHHH---HHHHHHccCCcEEEccchhHH
Q 024671 76 ELYSKVGVPFVMGTT-GGDRVR---LHETIENSNVYAVISPQMGKQ 117 (264)
Q Consensus 76 ~~~~~~g~plViGTT-G~~~~~---~~~l~~~~~~~~v~s~NfSlG 117 (264)
..|++.|+++++=-. ..+.++ +.++++++++.+....|+-.-
T Consensus 128 ~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~~ 173 (417)
T 3v5n_A 128 KEFLKRGIHVICDKPLTSTLADAKKLKKAADESDALFVLTHNYTGY 173 (417)
T ss_dssp HHHHTTTCEEEEESSSCSSHHHHHHHHHHHHHCSSCEEEECGGGGS
T ss_pred HHHHhCCCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEEecccCC
Confidence 999999999888544 345554 444566667888888886543
No 78
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=87.99 E-value=4 Score=30.36 Aligned_cols=73 Identities=12% Similarity=0.150 Sum_probs=42.7
Q ss_pred CCchhhHHhhhhc-CCCCEEEEECCCh-H-HHHHHHHHHHh----cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchh
Q 024671 43 LSDRESVLASVFD-KYPNMIVVDYTVP-A-AVNGNAELYSK----VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMG 115 (264)
Q Consensus 43 ~~dl~~~l~~~~~-~~~d~VvIDFS~p-~-~~~~~~~~~~~----~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfS 115 (264)
..+.++++..+.. ..+|.|++|+..| . .-.+.++...+ ..+|+|+-|.--+.+......+ .+.--++.-.++
T Consensus 35 ~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~-~g~~~~l~KP~~ 113 (140)
T 3lua_A 35 VENLKKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNSRTANTPVIIATKSDNPGYRHAALK-FKVSDYILKPYP 113 (140)
T ss_dssp ECSHHHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSGGGTTCCEEEEESCCCHHHHHHHHH-SCCSEEEESSCC
T ss_pred ECCHHHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCcccCCCCEEEEeCCCCHHHHHHHHH-cCCCEEEECCCC
Confidence 3456666776666 6799889999998 4 23455555554 4677776655444544444433 343333333344
Q ss_pred H
Q 024671 116 K 116 (264)
Q Consensus 116 l 116 (264)
.
T Consensus 114 ~ 114 (140)
T 3lua_A 114 T 114 (140)
T ss_dssp T
T ss_pred H
Confidence 4
No 79
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=87.88 E-value=2 Score=31.55 Aligned_cols=74 Identities=9% Similarity=0.150 Sum_probs=46.3
Q ss_pred CCchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHhc---CCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHH
Q 024671 43 LSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV---GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQ 117 (264)
Q Consensus 43 ~~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~---g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlG 117 (264)
..+.++++..+....||.|++|...|.. -.+.++...+. ..+.|+-+|+.+.+......+ .+.--++.-.++..
T Consensus 36 ~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~~~~~~~~~~~~~~-~g~~~~l~kP~~~~ 113 (132)
T 3lte_A 36 AHNGFDAGIKLSTFEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPKILVVSGLDKAKLQQAVT-EGADDYLEKPFDND 113 (132)
T ss_dssp ESSHHHHHHHHHHTCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCEEEEECCSCSHHHHHHHH-HTCCEEECSSCCHH
T ss_pred eCCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCeEEEEeCCChHHHHHHHH-hChHHHhhCCCCHH
Confidence 3456666666666789988999998863 34555555543 467788888877654444333 34444555556653
No 80
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=87.87 E-value=1.9 Score=38.01 Aligned_cols=103 Identities=14% Similarity=0.045 Sum_probs=67.0
Q ss_pred ChHHHHHHHH----hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHH
Q 024671 1 MGKAVIKAAD----AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAE 76 (264)
Q Consensus 1 MG~~i~~~~~----~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~ 76 (264)
||+..++.+. .++++|++..+... .... .+++. .|.++.+++ ..+| +|+-.|-+..-.+.+.
T Consensus 18 iG~~~~~~l~~~~~~~~~~lvav~d~~~--~a~~-----~g~~~---~~~~ell~~---~~vD-~V~i~tp~~~H~~~~~ 83 (294)
T 1lc0_A 18 AGSVRLRDLKDPRSAAFLNLIGFVSRRE--LGSL-----DEVRQ---ISLEDALRS---QEID-VAYICSESSSHEDYIR 83 (294)
T ss_dssp HHHHHHHHHTSHHHHTTEEEEEEECSSC--CCEE-----TTEEB---CCHHHHHHC---SSEE-EEEECSCGGGHHHHHH
T ss_pred HHHHHHHHHhccccCCCEEEEEEECchH--HHHH-----cCCCC---CCHHHHhcC---CCCC-EEEEeCCcHhHHHHHH
Confidence 4666665553 25789998776432 1111 12342 466666642 3466 7888998899999999
Q ss_pred HHHhcCCCeEEecC-CCCHHH---HHHHHHccCCcEEEccchhHH
Q 024671 77 LYSKVGVPFVMGTT-GGDRVR---LHETIENSNVYAVISPQMGKQ 117 (264)
Q Consensus 77 ~~~~~g~plViGTT-G~~~~~---~~~l~~~~~~~~v~s~NfSlG 117 (264)
.|++.|+++++=-. ..+.++ +.+++++.++.+..+.|+-..
T Consensus 84 ~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~~~~~~r~~ 128 (294)
T 1lc0_A 84 QFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRVLHEEHVELLM 128 (294)
T ss_dssp HHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCCEEEECGGGGS
T ss_pred HHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEEhHhcc
Confidence 99999999888542 345554 444555566777788886654
No 81
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=87.84 E-value=5 Score=35.51 Aligned_cols=103 Identities=12% Similarity=0.066 Sum_probs=62.9
Q ss_pred HHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCC
Q 024671 5 VIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVP 84 (264)
Q Consensus 5 i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~p 84 (264)
.++.+..++++|+++.+..+... +...-.-.+++++ .|.++.+++ ..+| +|+-.|-+..-.+.+..|++.|++
T Consensus 20 ~~~~l~~~~~~lvav~d~~~~~~-~~~a~~~~~~~~~--~~~~~ll~~---~~~D-~V~i~tp~~~h~~~~~~al~aGkh 92 (336)
T 2p2s_A 20 MCQQLIDAGAELAGVFESDSDNR-AKFTSLFPSVPFA--ASAEQLITD---ASID-LIACAVIPCDRAELALRTLDAGKD 92 (336)
T ss_dssp HHHHHHHTTCEEEEEECSCTTSC-HHHHHHSTTCCBC--SCHHHHHTC---TTCC-EEEECSCGGGHHHHHHHHHHTTCE
T ss_pred hhhhhcCCCcEEEEEeCCCHHHH-HHHHHhcCCCccc--CCHHHHhhC---CCCC-EEEEeCChhhHHHHHHHHHHCCCc
Confidence 44444567999999887544221 1110000012333 466666542 3578 677788888889999999999999
Q ss_pred eEEec-CCCCHHHH---HHHHHccCCcEEEccch
Q 024671 85 FVMGT-TGGDRVRL---HETIENSNVYAVISPQM 114 (264)
Q Consensus 85 lViGT-TG~~~~~~---~~l~~~~~~~~v~s~Nf 114 (264)
+++=- -..+.++. .+++++.++.+...-|+
T Consensus 93 Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~~~ 126 (336)
T 2p2s_A 93 FFTAKPPLTTLEQLDAVQRRVAETGRKFAVYFNE 126 (336)
T ss_dssp EEECSSCCSCHHHHHHHHHHHHHHCCCEEECCTT
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHcCCEEEEeecc
Confidence 88864 23455554 44455566777666664
No 82
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=87.52 E-value=0.3 Score=44.65 Aligned_cols=103 Identities=13% Similarity=0.074 Sum_probs=63.0
Q ss_pred ChHHHHHHHH-hC--------CCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChH-H
Q 024671 1 MGKAVIKAAD-AA--------GLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPA-A 70 (264)
Q Consensus 1 MG~~i~~~~~-~~--------~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~-~ 70 (264)
||+.+++.+. .+ +++|+++.++..... +. +. ... ++ +|.++.+ ..| ||||.|... .
T Consensus 14 VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~-~~--~~-~~~-~~--~d~~~ll------~iD-vVve~t~~~~~ 79 (332)
T 2ejw_A 14 VGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKP-RA--IP-QEL-LR--AEPFDLL------EAD-LVVEAMGGVEA 79 (332)
T ss_dssp HHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSC-CS--SC-GGG-EE--SSCCCCT------TCS-EEEECCCCSHH
T ss_pred HHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHh-hc--cC-ccc-cc--CCHHHHh------CCC-EEEECCCCcHH
Confidence 5788888876 34 689998877543210 11 10 011 11 2333333 478 899999654 5
Q ss_pred HHHHHHHHHhcCCCeEEecCCCC---HHHHHHHHHccCCcEEEccchhHHHH
Q 024671 71 VNGNAELYSKVGVPFVMGTTGGD---RVRLHETIENSNVYAVISPQMGKQVV 119 (264)
Q Consensus 71 ~~~~~~~~~~~g~plViGTTG~~---~~~~~~l~~~~~~~~v~s~NfSlGv~ 119 (264)
..+++..|+++|+++|+..-+.- -+++.++++++ .++|.++..-|.-
T Consensus 80 a~~~~~~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~--~~~~Ea~vg~giP 129 (332)
T 2ejw_A 80 PLRLVLPALEAGIPLITANKALLAEAWESLRPFAEEG--LIYHEASVMAGTP 129 (332)
T ss_dssp HHHHHHHHHHTTCCEEECCHHHHHHSHHHHHHHHHTT--CEECGGGTTTTSS
T ss_pred HHHHHHHHHHcCCeEEECCchhHHHHHHHHHHHHHhC--CeEEEEEcccCCH
Confidence 68899999999999999644432 23445555544 6777776666643
No 83
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=87.52 E-value=2.6 Score=31.41 Aligned_cols=79 Identities=9% Similarity=0.104 Sum_probs=46.8
Q ss_pred eEeecCCchhhHHhhhhcCCCCEEEEECCChH---HHHHHHHHHHhc--CCCeEEecCCCCHHHHHHHHHccCCcEEEcc
Q 024671 38 IQVHGLSDRESVLASVFDKYPNMIVVDYTVPA---AVNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISP 112 (264)
Q Consensus 38 i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~---~~~~~~~~~~~~--g~plViGTTG~~~~~~~~l~~~~~~~~v~s~ 112 (264)
+.+....+.++++..+....+|.|++|...|. .-.+.++...+. .+|+|+-|.--+.+...... ..+.--++.-
T Consensus 31 ~~v~~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~-~~ga~~~l~K 109 (136)
T 3kto_A 31 VTIQCFASAESFMRQQISDDAIGMIIEAHLEDKKDSGIELLETLVKRGFHLPTIVMASSSDIPTAVRAM-RASAADFIEK 109 (136)
T ss_dssp SEEEEESSHHHHTTSCCCTTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCEEEEESSCCHHHHHHHH-HTTCSEEEES
T ss_pred cEEEEeCCHHHHHHHHhccCCCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHH-HcChHHheeC
Confidence 33433456666776666667898899999988 445666666654 56776665544444443333 3443334444
Q ss_pred chhHH
Q 024671 113 QMGKQ 117 (264)
Q Consensus 113 NfSlG 117 (264)
.++..
T Consensus 110 P~~~~ 114 (136)
T 3kto_A 110 PFIEH 114 (136)
T ss_dssp SBCHH
T ss_pred CCCHH
Confidence 46654
No 84
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=87.01 E-value=0.55 Score=42.74 Aligned_cols=72 Identities=14% Similarity=0.061 Sum_probs=52.4
Q ss_pred CCCEEEEECCChHHHHHHHHHHHhcCCCeEEecCCCCH--HHHHHHHHccCCcEEEccchhHHHHHHHHHHHHHHHhc
Q 024671 57 YPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDR--VRLHETIENSNVYAVISPQMGKQVVAFLAAMEIMAEQF 132 (264)
Q Consensus 57 ~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGTTG~~~--~~~~~l~~~~~~~~v~s~NfSlGv~ll~~~~~~aa~~l 132 (264)
.+| +||.-.-|..-...++.|++.|+++|- +|+..+ .++.+.++++++.++...=|.=|+-=++ +..+.+.+
T Consensus 77 ~~D-vVi~~~p~~~~~~v~~~~~~~g~~yvD-~s~~~~~~~~l~~~a~~~g~~~i~~~G~~PG~~~~~--a~~~~~~~ 150 (365)
T 3abi_A 77 EFE-LVIGALPGFLGFKSIKAAIKSKVDMVD-VSFMPENPLELRDEAEKAQVTIVFDAGFAPGLSNIL--MGRIFQEL 150 (365)
T ss_dssp TCS-EEEECCCGGGHHHHHHHHHHHTCEEEE-CCCCSSCGGGGHHHHHHTTCEEECCCBTTTBHHHHH--HHHHHHHS
T ss_pred CCC-EEEEecCCcccchHHHHHHhcCcceEe-eeccchhhhhhhhhhccCCceeeecCCCCCchHHHH--HHHHHHhc
Confidence 578 899998888888999999999999887 444433 3566677778888888888888853322 33445554
No 85
>2obn_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: PG4; 2.30A {Anabaena variabilis}
Probab=86.32 E-value=1.9 Score=39.69 Aligned_cols=92 Identities=15% Similarity=0.171 Sum_probs=60.8
Q ss_pred HHHHHHHHhCCCeEEEEEcCCCccccccc----cccCceeEeecCCchhhHHhhhhcCCCCEEEEEC-----CChHHHHH
Q 024671 3 KAVIKAADAAGLELVPVSFGTEEESGQKV----EVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDY-----TVPAAVNG 73 (264)
Q Consensus 3 ~~i~~~~~~~~~eLv~~~~~~~~~~g~~~----~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDF-----S~p~~~~~ 73 (264)
|...-.+..+++++|+.++.. ..|+|+ +. ..++++. .|++++++ ..||.++|=- -.|+...+
T Consensus 24 Kta~gl~r~~~~~iVgvid~~--~~G~d~ge~~g~-~~gipi~--~~l~~al~----~~~d~lvig~a~~gG~l~~~~~~ 94 (349)
T 2obn_A 24 KTGLALLRYSEAPIVAVIDRN--CAGQSLREITGI-YRYVPIV--KSVEAALE----YKPQVLVIGIAPKGGGIPDDYWI 94 (349)
T ss_dssp HHHHHHHHHCCSCEEEEECGG--GTTSCHHHHHCC-CSCCCEE--SSHHHHGG----GCCSEEEECCCCCCC-SCGGGHH
T ss_pred HHhHHhhhcCCCcEEEEEeCC--CCCCcHHHhcCC-cCCCCcc--CCHHHHHh----CCCCEEEEEecCCCCCCCHHHHH
Confidence 333333445679999999843 456665 22 3367775 47888774 3689656665 14567889
Q ss_pred HHHHHHhcCCCeEEecCCC-C-HHHHHHHHHc
Q 024671 74 NAELYSKVGVPFVMGTTGG-D-RVRLHETIEN 103 (264)
Q Consensus 74 ~~~~~~~~g~plViGTTG~-~-~~~~~~l~~~ 103 (264)
.+..|++.|+.+|.|-=-+ + ..++.+++++
T Consensus 95 ~i~~Al~~G~~Vvsglh~~l~~~pel~~~A~~ 126 (349)
T 2obn_A 95 ELKTALQAGMSLVNGLHTPLANIPDLNALLQP 126 (349)
T ss_dssp HHHHHHHTTCEEEECSSSCCTTCHHHHHHCCT
T ss_pred HHHHHHHcCCcEEeCccchhhCCHHHHHHHHc
Confidence 9999999999999986543 2 2456666554
No 86
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=85.96 E-value=2.6 Score=37.28 Aligned_cols=116 Identities=13% Similarity=0.104 Sum_probs=67.6
Q ss_pred ChH-HHHHHHH-hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGK-AVIKAAD-AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~-~i~~~~~-~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
||+ ..++.+. .++.+|+ +.+..+... +.. ....+++....+..+ .+ +..+| +|+-.|-|..-.+.+..|
T Consensus 13 ig~~~~~~~l~~~~~~~l~-v~d~~~~~~-~~~-a~~~g~~~~~~~~~~-~l----~~~~D-~V~i~tp~~~h~~~~~~a 83 (323)
T 1xea_A 13 IAQKAYLPVLAQWPDIELV-LCTRNPKVL-GTL-ATRYRVSATCTDYRD-VL----QYGVD-AVMIHAATDVHSTLAAFF 83 (323)
T ss_dssp HHHHTHHHHHTTSTTEEEE-EECSCHHHH-HHH-HHHTTCCCCCSSTTG-GG----GGCCS-EEEECSCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCceEE-EEeCCHHHH-HHH-HHHcCCCccccCHHH-Hh----hcCCC-EEEEECCchhHHHHHHHH
Confidence 566 3666665 4689999 766543211 111 000122210112222 23 23688 799999999999999999
Q ss_pred HhcCCCeEEec-CCCCHHH---HHHHHHccCCcEEEccch--hHHHHHHHHHH
Q 024671 79 SKVGVPFVMGT-TGGDRVR---LHETIENSNVYAVISPQM--GKQVVAFLAAM 125 (264)
Q Consensus 79 ~~~g~plViGT-TG~~~~~---~~~l~~~~~~~~v~s~Nf--SlGv~ll~~~~ 125 (264)
++.|+++++-. ...+.++ +.+++++.++.+..+.|+ +=.+..+.+++
T Consensus 84 l~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i 136 (323)
T 1xea_A 84 LHLGIPTFVDKPLAASAQECENLYELAEKHHQPLYVGFNRRHIPLYNQHLSEL 136 (323)
T ss_dssp HHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEECGGGCCHHHHHHCHHH
T ss_pred HHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCeEEEeeccccCHHHHHHHHHH
Confidence 99999998864 3455554 444555566777666663 44444444443
No 87
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=85.19 E-value=4.7 Score=29.44 Aligned_cols=73 Identities=12% Similarity=0.142 Sum_probs=42.4
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHhc----CCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV----GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQ 117 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~----g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlG 117 (264)
.+.+++++.+....||.|++|+..|.. -.+.++...+. .+|+|+=|.-.+.+.... +...+.--++.-.++..
T Consensus 33 ~~~~~al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~-~~~~Ga~~~l~KP~~~~ 110 (122)
T 3gl9_A 33 ENGQIALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESL-ALSLGARKVMRKPFSPS 110 (122)
T ss_dssp SSHHHHHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESCCSHHHHHH-HHHTTCSEEEESSCCHH
T ss_pred CCHHHHHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecCCchHHHHH-HHhcChhhhccCCCCHH
Confidence 455666666666789988999998863 34455555443 467776554344443333 33345444555555553
No 88
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=84.91 E-value=10 Score=28.22 Aligned_cols=79 Identities=8% Similarity=0.143 Sum_probs=45.7
Q ss_pred eeEeecCCchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHh----cCCCeEEecCCCCHHHHHHHHHccCCcEEEc
Q 024671 37 EIQVHGLSDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSK----VGVPFVMGTTGGDRVRLHETIENSNVYAVIS 111 (264)
Q Consensus 37 ~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~----~g~plViGTTG~~~~~~~~l~~~~~~~~v~s 111 (264)
++.+....+.++++..+....+|.|++|...|. .-.+.++...+ ..+|+|+-|.-.+.+......+ .+.--++.
T Consensus 32 g~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~-~g~~~~l~ 110 (147)
T 2zay_A 32 GFDIIQCGNAIEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSGRATAKEEAQLLD-MGFIDFIA 110 (147)
T ss_dssp TEEEEEESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEESSCCHHHHHHHHH-HTCSEEEE
T ss_pred CCeEEEeCCHHHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEeCCCCHHHHHHHHh-CCCCEEEe
Confidence 344444566677777666667998899999875 23455665554 3577777665555444433333 34333333
Q ss_pred cchhH
Q 024671 112 PQMGK 116 (264)
Q Consensus 112 ~NfSl 116 (264)
-.++.
T Consensus 111 kp~~~ 115 (147)
T 2zay_A 111 KPVNA 115 (147)
T ss_dssp SSCCH
T ss_pred CCCCH
Confidence 34444
No 89
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=84.75 E-value=5.3 Score=29.80 Aligned_cols=74 Identities=15% Similarity=0.245 Sum_probs=42.3
Q ss_pred CCchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHh----cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHH
Q 024671 43 LSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK----VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQ 117 (264)
Q Consensus 43 ~~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~----~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlG 117 (264)
..+.++++..+....||.|++|...|.. -.+.++...+ ..+|+|+-|.--+.+...... ..+.--++.-.|+..
T Consensus 34 ~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~-~~ga~~~l~KP~~~~ 112 (136)
T 3t6k_A 34 AASGEEALQQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQGDISAKIAGF-EAGANDYLAKPFEPQ 112 (136)
T ss_dssp ESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECTTCHHHHHHHH-HHTCSEEEETTCCHH
T ss_pred eCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecCCCHHHHHHHH-hcCcceEEeCCCCHH
Confidence 3455666666666779988999998852 3445555444 257777766544444333332 234333444445543
No 90
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=84.67 E-value=5.8 Score=29.44 Aligned_cols=73 Identities=8% Similarity=0.064 Sum_probs=40.2
Q ss_pred EeecCCchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHhc--CCCeEEecCCCCHHHHHHHHHccCCcEEEcc
Q 024671 39 QVHGLSDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISP 112 (264)
Q Consensus 39 ~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~~--g~plViGTTG~~~~~~~~l~~~~~~~~v~s~ 112 (264)
.+....+.++++..+....+|.|++|. .|. .-.+.++...+. .+|+|+=|.-.+.+......+..-..++.-|
T Consensus 30 ~v~~~~~~~~a~~~l~~~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP 105 (142)
T 2qxy_A 30 NVIWAKNEQEAFTFLRREKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAYVDKDLIINSVKAGAVDYILKP 105 (142)
T ss_dssp EEEEESSHHHHHHHHTTSCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHHHTCSCEEESS
T ss_pred EEEEECCHHHHHHHHhccCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCcceeEeCC
Confidence 333345666677766667799889999 775 234455554443 4666665544444444333333224445443
No 91
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=84.67 E-value=3.6 Score=30.44 Aligned_cols=71 Identities=6% Similarity=-0.017 Sum_probs=40.7
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHh----cCCCeEEecCCCCHHHHHHHHHccC-CcEEEccchhH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSK----VGVPFVMGTTGGDRVRLHETIENSN-VYAVISPQMGK 116 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~----~g~plViGTTG~~~~~~~~l~~~~~-~~~v~s~NfSl 116 (264)
.+.++++..+....+|.|++|...|. .-.+.++...+ ..+|+|+-|...+.+......+ .+ ..++.-| ++.
T Consensus 41 ~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~-~g~~~~l~kP-~~~ 117 (143)
T 3cnb_A 41 YNPFDAGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAMTGALTDDNVSRIVA-LGAETCFGKP-LNF 117 (143)
T ss_dssp CSHHHHHHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEEEEESSCCHHHHHHHHH-TTCSEEEESS-CCH
T ss_pred CCHHHHHHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccCCcEEEEeCCCCHHHHHHHHh-cCCcEEEeCC-CCH
Confidence 45556666666667998899999875 23455666555 3456666554444444433333 34 3444444 544
No 92
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=84.58 E-value=2.4 Score=38.82 Aligned_cols=120 Identities=13% Similarity=0.115 Sum_probs=68.0
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEee--cCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVH--GLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~--~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
||+.+++.+.+. .++. +.++........... ...+.++ ..+++++.++ .+| +||.-+.+..-...++.|
T Consensus 27 iG~~ia~~L~~~-~~V~-V~~R~~~~a~~la~~-~~~~~~d~~~~~~l~~ll~-----~~D-vVIn~~P~~~~~~v~~a~ 97 (365)
T 2z2v_A 27 IGRAIAWDLKDE-FDVY-IGDVNNENLEKVKEF-ATPLKVDASNFDKLVEVMK-----EFE-LVIGALPGFLGFKSIKAA 97 (365)
T ss_dssp HHHHHHHHHTTT-SEEE-EEESCHHHHHHHTTT-SEEEECCTTCHHHHHHHHT-----TCS-CEEECCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC-CeEE-EEECCHHHHHHHHhh-CCeEEEecCCHHHHHHHHh-----CCC-EEEECCChhhhHHHHHHH
Confidence 688888888755 6665 344433211000000 0012221 1123333332 578 788887666667788999
Q ss_pred HhcCCCeEEecCCCCH--HHHHHHHHccCCcEEEccchhHHHHHHHHHHHHHHHhc
Q 024671 79 SKVGVPFVMGTTGGDR--VRLHETIENSNVYAVISPQMGKQVVAFLAAMEIMAEQF 132 (264)
Q Consensus 79 ~~~g~plViGTTG~~~--~~~~~l~~~~~~~~v~s~NfSlGv~ll~~~~~~aa~~l 132 (264)
++.|+.+|.-+ ...+ .++.+.++++++.++....|.-|+.-++ +..+++.+
T Consensus 98 l~~G~~~vD~s-~~~~~~~~l~~~Ak~aG~~~l~g~G~dPG~~~~~--a~~~~~~~ 150 (365)
T 2z2v_A 98 IKSKVDMVDVS-FMPENPLELRDEAEKAQVTIVFDAGFAPGLSNIL--MGRIFQEL 150 (365)
T ss_dssp HHTTCCEEECC-CCSSCGGGGHHHHHHTTCEEECSCBTTTBHHHHH--HHHHHHHS
T ss_pred HHhCCeEEEcc-CCcHHHHHHHHHHHHcCCEEEECCCCcchHHHHH--HHHHHHhc
Confidence 99999988744 3322 2456667777788887777777754322 23345544
No 93
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=84.48 E-value=5.7 Score=30.31 Aligned_cols=77 Identities=13% Similarity=0.158 Sum_probs=43.3
Q ss_pred eEeecCCchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHhc----CCCeEEecCCCCHHHHHHHHHccC-CcEEEc
Q 024671 38 IQVHGLSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV----GVPFVMGTTGGDRVRLHETIENSN-VYAVIS 111 (264)
Q Consensus 38 i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~----g~plViGTTG~~~~~~~~l~~~~~-~~~v~s 111 (264)
+.+....+.++++..+....||.|++|...|.. -.+.++...+. .+|+|+-|.--+.+......+ .+ ..++.-
T Consensus 32 ~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~-~g~~~~l~K 110 (154)
T 3gt7_A 32 YQTEHVRNGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILSDPRDVVRSLE-CGADDFITK 110 (154)
T ss_dssp CEEEEESSHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCCSHHHHHHHHH-HCCSEEEES
T ss_pred CEEEEeCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCCChHHHHHHHH-CCCCEEEeC
Confidence 334334566777777766789988999998752 34455555443 567666554344444433333 34 334443
Q ss_pred cchhH
Q 024671 112 PQMGK 116 (264)
Q Consensus 112 ~NfSl 116 (264)
| ++.
T Consensus 111 P-~~~ 114 (154)
T 3gt7_A 111 P-CKD 114 (154)
T ss_dssp S-CCH
T ss_pred C-CCH
Confidence 3 443
No 94
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=84.42 E-value=1.8 Score=39.22 Aligned_cols=68 Identities=13% Similarity=0.044 Sum_probs=48.8
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEec-CCCCHHH---HHHHHHccCCcEEEccchh
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGT-TGGDRVR---LHETIENSNVYAVISPQMG 115 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGT-TG~~~~~---~~~l~~~~~~~~v~s~NfS 115 (264)
.|+++.+++ ..+| +|+..|-+..-.+.+..|+++|+++++=- -+.+.++ +.++++++++.+..+.|+-
T Consensus 73 ~~~~~ll~~---~~iD-~V~i~tp~~~h~~~~~~al~~Gk~V~~EKP~a~~~~~~~~l~~~a~~~~~~~~v~~~~r 144 (383)
T 3oqb_A 73 TDLDAALAD---KNDT-MFFDAATTQARPGLLTQAINAGKHVYCEKPIATNFEEALEVVKLANSKGVKHGTVQDKL 144 (383)
T ss_dssp SCHHHHHHC---SSCC-EEEECSCSSSSHHHHHHHHTTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGG
T ss_pred CCHHHHhcC---CCCC-EEEECCCchHHHHHHHHHHHCCCeEEEcCCCCCCHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 477777653 3578 78899988989999999999999988632 2345554 4445566667777777743
No 95
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=84.21 E-value=4.6 Score=38.18 Aligned_cols=75 Identities=16% Similarity=0.082 Sum_probs=47.7
Q ss_pred hHHHHHHHHhCC-CeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 2 GKAVIKAADAAG-LELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 2 G~~i~~~~~~~~-~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
|+.+.+.+.+.| ..+.+ +.+.. ..+ .|++++. +++ ++. ..+| ++|=|..|+.+.+.++.|.+
T Consensus 24 g~~v~~~l~~~g~~~v~p-VnP~~----~~i----~G~~~y~--sl~----~lp-~~~D-lavi~vp~~~~~~~v~e~~~ 86 (457)
T 2csu_A 24 GYEVFKNLKEYKKGKVYP-VNIKE----EEV----QGVKAYK--SVK----DIP-DEID-LAIIVVPKRFVKDTLIQCGE 86 (457)
T ss_dssp HHHHHHHHTTCCSSEEEE-ECSSC----SEE----TTEECBS--STT----SCS-SCCS-EEEECSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEE-ECCCC----CeE----CCEeccC--CHH----HcC-CCCC-EEEEecCHHHHHHHHHHHHH
Confidence 667777776553 44443 33221 111 2466664 322 222 2578 56669999999999999999
Q ss_pred cCCCe-EEecCCCC
Q 024671 81 VGVPF-VMGTTGGD 93 (264)
Q Consensus 81 ~g~pl-ViGTTG~~ 93 (264)
.|++. |+=|.||.
T Consensus 87 ~Gi~~vv~~s~G~~ 100 (457)
T 2csu_A 87 KGVKGVVIITAGFG 100 (457)
T ss_dssp HTCCEEEECCCSST
T ss_pred cCCCEEEEecCCCC
Confidence 99996 55677884
No 96
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=84.04 E-value=5.4 Score=29.13 Aligned_cols=70 Identities=11% Similarity=0.147 Sum_probs=39.1
Q ss_pred CCchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHhc--CCCeEEecCCCCHHHHHHHHHccCCcEEEcc
Q 024671 43 LSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISP 112 (264)
Q Consensus 43 ~~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~--g~plViGTTG~~~~~~~~l~~~~~~~~v~s~ 112 (264)
..+.++++..+....||.|++|...|.. -.+.++...+. .+|+|+-|..-+.+......+..-...+.-|
T Consensus 37 ~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~KP 109 (130)
T 3eod_A 37 AADGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGVEDVLLKP 109 (130)
T ss_dssp ESCHHHHHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCCCHHHHHHHHHHCCSEEEESC
T ss_pred eCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCCCHHHHHHHHHcCCCEEEeCC
Confidence 4566677777766779988999998863 23445544443 4677766655555544444333224455555
No 97
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=83.94 E-value=0.82 Score=39.21 Aligned_cols=88 Identities=16% Similarity=0.074 Sum_probs=54.6
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
||+.+++.+.+.|++++..+++.+.... .+ ....++.+. .++++++ ..+| +||-.+.+..+.+.++.+.+
T Consensus 21 mG~~~a~~l~~~g~~~v~~~~~~~~~~~-~~-~~~~g~~~~--~~~~~~~-----~~~D-vvi~av~~~~~~~v~~~l~~ 90 (266)
T 3d1l_A 21 LATNLAKALYRKGFRIVQVYSRTEESAR-EL-AQKVEAEYT--TDLAEVN-----PYAK-LYIVSLKDSAFAELLQGIVE 90 (266)
T ss_dssp HHHHHHHHHHHHTCCEEEEECSSHHHHH-HH-HHHTTCEEE--SCGGGSC-----SCCS-EEEECCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCeEEEEEeCCHHHHH-HH-HHHcCCcee--CCHHHHh-----cCCC-EEEEecCHHHHHHHHHHHHh
Confidence 7889998887668886666664432110 00 000123332 2443332 2578 79999999888888776655
Q ss_pred ---cCCCeEEecCCCCHHHHH
Q 024671 81 ---VGVPFVMGTTGGDRVRLH 98 (264)
Q Consensus 81 ---~g~plViGTTG~~~~~~~ 98 (264)
.+..+|..|||+..+.++
T Consensus 91 ~~~~~~ivv~~s~~~~~~~l~ 111 (266)
T 3d1l_A 91 GKREEALMVHTAGSIPMNVWE 111 (266)
T ss_dssp TCCTTCEEEECCTTSCGGGST
T ss_pred hcCCCcEEEECCCCCchHHHH
Confidence 566788899999865543
No 98
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=83.62 E-value=11 Score=27.61 Aligned_cols=69 Identities=17% Similarity=0.218 Sum_probs=40.2
Q ss_pred CCchhhHHhhhhcCCCCEEEEECCCh-H-HHHHHHHHHHh-cCCCeEEecCCCCHHHHHHHHHccC-CcEEEcc
Q 024671 43 LSDRESVLASVFDKYPNMIVVDYTVP-A-AVNGNAELYSK-VGVPFVMGTTGGDRVRLHETIENSN-VYAVISP 112 (264)
Q Consensus 43 ~~dl~~~l~~~~~~~~d~VvIDFS~p-~-~~~~~~~~~~~-~g~plViGTTG~~~~~~~~l~~~~~-~~~v~s~ 112 (264)
..+.++++..+....+|.|++|...| . .-.+.++...+ ..+|+|+-|.-.+.+...... ..+ ..++.-|
T Consensus 40 ~~~~~~a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~~~~~~~~~~-~~g~~~~l~kp 112 (140)
T 3cg0_A 40 FDNGEEAVRCAPDLRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQDVETFQRAK-RVNPFGYLAKP 112 (140)
T ss_dssp ESSHHHHHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCCCHHHHHHHH-TTCCSEEEEES
T ss_pred ECCHHHHHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHH-hcCCCEEEeCC
Confidence 34556666666556799889999886 2 33444444433 578888776655554444333 344 3344433
No 99
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=83.39 E-value=8.2 Score=27.98 Aligned_cols=73 Identities=18% Similarity=0.191 Sum_probs=39.6
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHhc--CCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQ 117 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~~--g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlG 117 (264)
.+.++++..+....||.|++|...|. .-.+.++...+. .+|+|+-|.--+.+......+ ++.--++.-.++..
T Consensus 34 ~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~-~ga~~~l~Kp~~~~ 109 (126)
T 1dbw_A 34 QSAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGHGDVPMAVEAMK-AGAVDFIEKPFEDT 109 (126)
T ss_dssp SCHHHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECTTCHHHHHHHHH-TTCSEEEESSCCHH
T ss_pred CCHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHH-hCHHHheeCCCCHH
Confidence 34455555555567898899999885 234455555443 567776554444444333333 34333333344543
No 100
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=83.07 E-value=7.4 Score=28.18 Aligned_cols=72 Identities=14% Similarity=0.194 Sum_probs=40.5
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHh-cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK-VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~-~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSl 116 (264)
.+.++++..+....||.|++|...|.. -.+.++...+ ..+|+|+=|+.-+.+...... ..+.--++.-.++.
T Consensus 33 ~~~~~al~~~~~~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~~~~~~~~~~~-~~ga~~~l~KP~~~ 106 (120)
T 3f6p_A 33 HDGNEAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAKDSEIDKVIGL-EIGADDYVTKPFST 106 (120)
T ss_dssp SSHHHHHHHHHTTCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEESSCHHHHHHHH-HTTCCEEEEESCCH
T ss_pred CCHHHHHHHHhhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECCCChHHHHHHH-hCCcceeEcCCCCH
Confidence 355566666666689988999999863 2344444433 467777666544444433332 34433344444554
No 101
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=82.81 E-value=12 Score=27.65 Aligned_cols=74 Identities=16% Similarity=0.127 Sum_probs=44.7
Q ss_pred CCchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHh----cCCCeEEecCCCCHHHHHHHHHccC-CcEEEccchhH
Q 024671 43 LSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK----VGVPFVMGTTGGDRVRLHETIENSN-VYAVISPQMGK 116 (264)
Q Consensus 43 ~~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~----~g~plViGTTG~~~~~~~~l~~~~~-~~~v~s~NfSl 116 (264)
..+.++++..+....+|.|++|...|.. -.+.++...+ .++|+|+-|.-.+.+......+ .+ ..++.-|-.+.
T Consensus 37 ~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~-~ga~~~l~Kp~~~~ 115 (144)
T 3kht_A 37 VDNGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCMA-AGASSVVDKSSNNV 115 (144)
T ss_dssp ESSHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHHH-TTCSEEEECCTTSH
T ss_pred ECCHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHHH-cCCCEEEECCCCcH
Confidence 3466667777766789988999998863 3455555554 3577777665555555444433 44 34444442154
Q ss_pred H
Q 024671 117 Q 117 (264)
Q Consensus 117 G 117 (264)
.
T Consensus 116 ~ 116 (144)
T 3kht_A 116 T 116 (144)
T ss_dssp H
T ss_pred H
Confidence 3
No 102
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=82.57 E-value=1.9 Score=41.38 Aligned_cols=57 Identities=9% Similarity=-0.075 Sum_probs=45.2
Q ss_pred CCCEEEEECCChHHHHHHHHHHHhcCCCeEEecCCCCHHHHHHHHHccC-Cc-EEEccch
Q 024671 57 YPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSN-VY-AVISPQM 114 (264)
Q Consensus 57 ~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGTTG~~~~~~~~l~~~~~-~~-~v~s~Nf 114 (264)
.+| +.|=|.-++.+.+.++.|.+.|+++||=|.||..+..+++.+.++ .. -++-||-
T Consensus 36 ~~D-lavI~vPa~~v~~~v~e~~~~Gv~~viis~Gf~~~~~~~l~~~A~~~g~rliGPNc 94 (480)
T 3dmy_A 36 DAN-LALISVAGEYAAELANQALDRNLNVMMFSDNVTLEDEIQLKTRAREKGLLVMGPDC 94 (480)
T ss_dssp TCC-EEEECSCHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHHTTCCEECSSC
T ss_pred CCC-EEEEecCHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEecCc
Confidence 578 788999999999999999999999999999998654445544332 33 3788887
No 103
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=82.30 E-value=18 Score=29.04 Aligned_cols=78 Identities=15% Similarity=0.136 Sum_probs=46.2
Q ss_pred hhHHhhhhcCCCCEEEEECCC---hHHHHHHHHHHHhcC---CCeEEecCCCCHHHHHHHHHccCCcEEEccchhH--HH
Q 024671 47 ESVLASVFDKYPNMIVVDYTV---PAAVNGNAELYSKVG---VPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK--QV 118 (264)
Q Consensus 47 ~~~l~~~~~~~~d~VvIDFS~---p~~~~~~~~~~~~~g---~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSl--Gv 118 (264)
++..+.+.+..||.|.+=++. .+.+.+.++.+.+.+ +++++|=.-. .++.+.+ +..+.-.+|.|+.++ .+
T Consensus 59 e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG~~~-~~~~~~l-~~~G~d~v~~~~~~~~~~~ 136 (161)
T 2yxb_A 59 EQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGGTIP-IPDLEPL-RSLGIREIFLPGTSLGEII 136 (161)
T ss_dssp HHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEECCC-HHHHHHH-HHTTCCEEECTTCCHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeCCCc-hhcHHHH-HHCCCcEEECCCCCHHHHH
Confidence 334444455678966776653 355677777777754 7788884333 2333333 345666788887754 45
Q ss_pred HHHHHHHH
Q 024671 119 VAFLAAME 126 (264)
Q Consensus 119 ~ll~~~~~ 126 (264)
..+.++++
T Consensus 137 ~~~~~~~~ 144 (161)
T 2yxb_A 137 EKVRKLAE 144 (161)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555443
No 104
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=82.22 E-value=5.7 Score=28.70 Aligned_cols=72 Identities=13% Similarity=0.158 Sum_probs=38.8
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHh--cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~--~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSl 116 (264)
.+.++++..+....||.|++|...|.. -.+.++...+ ..+|+|+-|.--+.+......+..-...+.- .++.
T Consensus 34 ~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~K-P~~~ 108 (124)
T 1srr_A 34 ANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYGELDMIQESKELGALTHFAK-PFDI 108 (124)
T ss_dssp SSHHHHHHHHHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSCCHHHHHHHHHHTCCCEEES-SCCH
T ss_pred CCHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEEEEccCchHHHHHHHhcChHhhccC-CCCH
Confidence 344555555555578988999998852 3444555444 3566666554444444433333322444443 3554
No 105
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=81.93 E-value=12 Score=28.20 Aligned_cols=78 Identities=10% Similarity=0.137 Sum_probs=42.0
Q ss_pred eEeecCCchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHhc--CCCeEEecCCCCHHHHHHHHHccCC-cEEEccc
Q 024671 38 IQVHGLSDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNV-YAVISPQ 113 (264)
Q Consensus 38 i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~~--g~plViGTTG~~~~~~~~l~~~~~~-~~v~s~N 113 (264)
+.+....+.++++..+....||.|++|...|. .-.+.++...+. .+|+|+-|..-+.+......+..+. ..+.-|
T Consensus 32 ~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~~l~kP- 110 (154)
T 2rjn_A 32 CNIITFTSPLDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYADAQATIDAVNRGKISRFLLKP- 110 (154)
T ss_dssp CEEEEESCHHHHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGGGHHHHHHHHHTTCCSEEEESS-
T ss_pred CeEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCCCHHHHHHHHhccchheeeeCC-
Confidence 33333456666777666667998899999875 233445444442 4666655443333333333333323 344443
Q ss_pred hhH
Q 024671 114 MGK 116 (264)
Q Consensus 114 fSl 116 (264)
++.
T Consensus 111 ~~~ 113 (154)
T 2rjn_A 111 WED 113 (154)
T ss_dssp CCH
T ss_pred CCH
Confidence 444
No 106
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=81.29 E-value=8.7 Score=27.37 Aligned_cols=73 Identities=12% Similarity=0.171 Sum_probs=39.3
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHh--cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQ 117 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~--~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlG 117 (264)
.+.++++..+....||.+++|...|. .-.+.++...+ ..+|+|+-|.--+.+......+ .+.--++.-.++..
T Consensus 31 ~~~~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~-~g~~~~l~kp~~~~ 106 (121)
T 2pl1_A 31 EDAKEADYYLNEHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLS-AGADDYVTKPFHIE 106 (121)
T ss_dssp SSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESCCCHHHHHHHHH-TTCSEEEESSCCHH
T ss_pred CCHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecCCCHHHHHHHHH-cCccceEECCCCHH
Confidence 34455555555567898899999885 23445555444 3567776655444444333333 34333333344443
No 107
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=81.28 E-value=6.8 Score=29.17 Aligned_cols=72 Identities=11% Similarity=0.115 Sum_probs=40.4
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHhc-CCCeEEecCCCCHHHHHHHHHccCCcEEEccchhH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSKV-GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~~-g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSl 116 (264)
.+.++++..+....||.|++|+..|. .-.+.++...+. .+|+|+=|+.-+.+......+ .+.--++.-.++.
T Consensus 35 ~~~~~al~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ls~~~~~~~~~~~~~-~ga~~~l~KP~~~ 108 (136)
T 2qzj_A 35 YNCEEAIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYMTYINEDQSILNALN-SGGDDYLIKPLNL 108 (136)
T ss_dssp SSHHHHHHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCCCHHHHHHHHH-TTCCEEEESSCCH
T ss_pred CCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEEEEcCCCHHHHHHHHH-cCCcEEEECCCCH
Confidence 45555666555567898899999885 234555555443 577776665444444433333 3433333333444
No 108
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=80.99 E-value=5.8 Score=30.08 Aligned_cols=73 Identities=15% Similarity=0.256 Sum_probs=39.1
Q ss_pred CCchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHh--cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhH
Q 024671 43 LSDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 43 ~~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~--~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSl 116 (264)
..+.++++..+....||.|++|...|. .-.+.++...+ ..+|+|+-|.--+.+...... ..+.--++.-.++.
T Consensus 33 ~~~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~~~~~~~~~~-~~g~~~~l~kP~~~ 108 (155)
T 1qkk_A 33 FASATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHGDIPMAVQAI-QDGAYDFIAKPFAA 108 (155)
T ss_dssp ESCHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGGGHHHHHHHH-HTTCCEEEESSCCH
T ss_pred ECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCCChHHHHHHH-hcCCCeEEeCCCCH
Confidence 345566666665567898899999875 23344444444 357776655433333333332 34433333334444
No 109
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=80.30 E-value=14 Score=27.09 Aligned_cols=73 Identities=14% Similarity=0.213 Sum_probs=42.3
Q ss_pred CCchhhHHhhhhc----------CCCCEEEEECCChH-HHHHHHHHHHh----cCCCeEEecCCCCHHHHHHHHHccCCc
Q 024671 43 LSDRESVLASVFD----------KYPNMIVVDYTVPA-AVNGNAELYSK----VGVPFVMGTTGGDRVRLHETIENSNVY 107 (264)
Q Consensus 43 ~~dl~~~l~~~~~----------~~~d~VvIDFS~p~-~~~~~~~~~~~----~g~plViGTTG~~~~~~~~l~~~~~~~ 107 (264)
..+.++++..+.. ..+|.|++|+..|. .-.+.++...+ ..+|+|+-|.--+.+......+ .+.-
T Consensus 38 ~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~t~~~~~~~~~~~~~-~g~~ 116 (149)
T 1k66_A 38 CITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNLPGTDGREVLQEIKQDEVLKKIPVVIMTTSSNPKDIEICYS-YSIS 116 (149)
T ss_dssp ECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSSSCHHHHHHHHTTSTTGGGSCEEEEESCCCHHHHHHHHH-TTCS
T ss_pred ECCHHHHHHHHHhcccccCcccCCCCcEEEEECCCCCCCHHHHHHHHHhCcccCCCeEEEEeCCCCHHHHHHHHH-CCCC
Confidence 3455666666554 57898899999885 23455555555 3577777666555544443333 4433
Q ss_pred EEEccchhH
Q 024671 108 AVISPQMGK 116 (264)
Q Consensus 108 ~v~s~NfSl 116 (264)
-++.-.++.
T Consensus 117 ~~l~kP~~~ 125 (149)
T 1k66_A 117 SYIVKPLEI 125 (149)
T ss_dssp EEEECCSSH
T ss_pred EEEeCCCCH
Confidence 334334444
No 110
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=80.29 E-value=3.9 Score=37.25 Aligned_cols=80 Identities=24% Similarity=0.255 Sum_probs=50.3
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcC-CCc-c----------ccc------------cccccCceeEeecCCchhhH-Hhhhh
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFG-TEE-E----------SGQ------------KVEVCGKEIQVHGLSDRESV-LASVF 54 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~-~~~-~----------~g~------------~~~~~~~~i~i~~~~dl~~~-l~~~~ 54 (264)
||+.+.+++. .+++||++..+. .+. . .|. .+.+.+..+.+....|+++. +.
T Consensus 14 IGr~l~R~l~~~p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~~~~dp~~l~w~--- 90 (337)
T 3e5r_O 14 IGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIRNPDEIPWA--- 90 (337)
T ss_dssp HHHHHHHHHHTCSSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEECCSCGGGCCHH---
T ss_pred HHHHHHHHHhCCCCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEEecCChHHcccc---
Confidence 5999999987 579999988763 111 0 010 01111223444433344432 11
Q ss_pred cCCCCEEEEECCChHHHHHHHHHHHhcCCC
Q 024671 55 DKYPNMIVVDYTVPAAVNGNAELYSKVGVP 84 (264)
Q Consensus 55 ~~~~d~VvIDFS~p~~~~~~~~~~~~~g~p 84 (264)
+..+| +|++.|-.....+.+..+++.|++
T Consensus 91 ~~~vD-vV~eaTg~~~~~e~a~~~l~aGak 119 (337)
T 3e5r_O 91 EAGAE-YVVESTGVFTDKEKAAAHLKGGAK 119 (337)
T ss_dssp HHTCS-EEEECSSSCCSHHHHTHHHHTTCS
T ss_pred ccCCC-EEEECCCchhhHHHHHHHHHcCCC
Confidence 12578 899999988899999999999986
No 111
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=80.26 E-value=14 Score=27.28 Aligned_cols=72 Identities=14% Similarity=0.073 Sum_probs=39.6
Q ss_pred CchhhHHhhhh--cCCCCEEEEECCChHH-HHHHHHHHHh--cCCCeEEecCCCCHHHHHHHHHccC-CcEEEccchhHH
Q 024671 44 SDRESVLASVF--DKYPNMIVVDYTVPAA-VNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSN-VYAVISPQMGKQ 117 (264)
Q Consensus 44 ~dl~~~l~~~~--~~~~d~VvIDFS~p~~-~~~~~~~~~~--~g~plViGTTG~~~~~~~~l~~~~~-~~~v~s~NfSlG 117 (264)
.+.++++..+. ...+|.|++|...|.. -.+.++...+ ..+|+|+-|.-.+.+......+ .+ ...+.-| ++..
T Consensus 34 ~~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~-~g~~~~l~kp-~~~~ 111 (143)
T 3jte_A 34 SSSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGHGDLDNAILAMK-EGAFEYLRKP-VTAQ 111 (143)
T ss_dssp SSHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECTTCHHHHHHHHH-TTCSEEEESS-CCHH
T ss_pred CCHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHHH-hCcceeEeCC-CCHH
Confidence 34555555554 4578988999998752 2344444444 3567776665455544444333 34 3444444 5543
No 112
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=80.06 E-value=1 Score=43.37 Aligned_cols=83 Identities=13% Similarity=0.185 Sum_probs=52.3
Q ss_pred ChHHHHHHHH-hCCCe---EEEEEcCCCccccccc----cccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHH
Q 024671 1 MGKAVIKAAD-AAGLE---LVPVSFGTEEESGQKV----EVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVN 72 (264)
Q Consensus 1 MG~~i~~~~~-~~~~e---Lv~~~~~~~~~~g~~~----~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~ 72 (264)
||+.++..+. ..+++ ++.+ ++.. .+.++ ++.-..+.++. +|.++.++.+... .| +||+-+.|-...
T Consensus 24 VG~~va~lla~~~dv~~~~I~va-D~~~--~~~~~~~~~g~~~~~~~Vda-dnv~~~l~aLl~~-~D-vVIN~s~~~~~l 97 (480)
T 2ph5_A 24 VGQALMPLIFEKFDIKPSQVTII-AAEG--TKVDVAQQYGVSFKLQQITP-QNYLEVIGSTLEE-ND-FLIDVSIGISSL 97 (480)
T ss_dssp HHHHHHHHHHHHBCCCGGGEEEE-ESSC--CSCCHHHHHTCEEEECCCCT-TTHHHHTGGGCCT-TC-EEEECCSSSCHH
T ss_pred HHHHHHHHHHhCCCCceeEEEEe-ccch--hhhhHHhhcCCceeEEeccc-hhHHHHHHHHhcC-CC-EEEECCccccCH
Confidence 6899999887 56663 4432 3221 12222 11111233432 4444555555443 58 899999999999
Q ss_pred HHHHHHHhcCCCeEEec
Q 024671 73 GNAELYSKVGVPFVMGT 89 (264)
Q Consensus 73 ~~~~~~~~~g~plViGT 89 (264)
..+++|++.|+..+-=+
T Consensus 98 ~Im~acleaGv~YlDTa 114 (480)
T 2ph5_A 98 ALIILCNQKGALYINAA 114 (480)
T ss_dssp HHHHHHHHHTCEEEESS
T ss_pred HHHHHHHHcCCCEEECC
Confidence 99999999999987644
No 113
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=80.06 E-value=5.6 Score=29.69 Aligned_cols=76 Identities=11% Similarity=0.193 Sum_probs=41.7
Q ss_pred EeecCCchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHhc--CCCeEEecCCCCHHHHHHHHHccC-CcEEEccch
Q 024671 39 QVHGLSDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSN-VYAVISPQM 114 (264)
Q Consensus 39 ~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~~--g~plViGTTG~~~~~~~~l~~~~~-~~~v~s~Nf 114 (264)
.+....+.++++..+....+|.|++|+..|. .-.+.++...+. .+|+|+-|.--+.+......+ .+ ...+.-| +
T Consensus 30 ~v~~~~~~~~a~~~l~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~-~ga~~~l~KP-~ 107 (137)
T 3cfy_A 30 DIFHVETGRDAIQFIERSKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIATAHGSVDLAVNLIQ-KGAEDFLEKP-I 107 (137)
T ss_dssp EEEEESSHHHHHHHHHHHCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEEESSCCHHHHHHHHH-TTCSEEEESS-C
T ss_pred eEEEeCCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEecCcHHHHHHHHH-CCccEEEeCC-C
Confidence 3333455566666655567898899999885 234455555443 466666555444444433333 34 3344433 4
Q ss_pred hH
Q 024671 115 GK 116 (264)
Q Consensus 115 Sl 116 (264)
+.
T Consensus 108 ~~ 109 (137)
T 3cfy_A 108 NA 109 (137)
T ss_dssp CH
T ss_pred CH
Confidence 43
No 114
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=79.97 E-value=6.5 Score=35.90 Aligned_cols=97 Identities=7% Similarity=-0.023 Sum_probs=59.3
Q ss_pred CCCeEEEEEcCCCccccccccccCcee-EeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEecC
Q 024671 12 AGLELVPVSFGTEEESGQKVEVCGKEI-QVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT 90 (264)
Q Consensus 12 ~~~eLv~~~~~~~~~~g~~~~~~~~~i-~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGTT 90 (264)
++.+|+++.+..+... +.. ....++ .++ .|.++.|++ ..+| +|+=.|-+..=.+.+..|++.|+++.+=-.
T Consensus 57 ~~~elvav~d~~~~~a-~~~-a~~~~~~~~y--~d~~~ll~~---~~vD-~V~I~tp~~~H~~~~~~al~aGkhVl~EKP 128 (412)
T 4gqa_A 57 KRPHLYALADQDQAMA-ERH-AAKLGAEKAY--GDWRELVND---PQVD-VVDITSPNHLHYTMAMAAIAAGKHVYCEKP 128 (412)
T ss_dssp SEEEEEEEECSSHHHH-HHH-HHHHTCSEEE--SSHHHHHHC---TTCC-EEEECSCGGGHHHHHHHHHHTTCEEEEESC
T ss_pred CCeEEEEEEcCCHHHH-HHH-HHHcCCCeEE--CCHHHHhcC---CCCC-EEEECCCcHHHHHHHHHHHHcCCCeEeecC
Confidence 3679998877543211 110 001122 243 477777653 4578 677778788889999999999999887433
Q ss_pred -CCCHHH---HHHHHHccCCcEEEccchhH
Q 024671 91 -GGDRVR---LHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 91 -G~~~~~---~~~l~~~~~~~~v~s~NfSl 116 (264)
..+.++ +.+++++++..+....|+-.
T Consensus 129 ~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~ 158 (412)
T 4gqa_A 129 LAVNEQQAQEMAQAARRAGVKTMVAFNNIK 158 (412)
T ss_dssp SCSSHHHHHHHHHHHHHHTCCEEEECGGGT
T ss_pred CcCCHHHHHHHHHHHHHhCCeeeeccceec
Confidence 234444 44456666777777777443
No 115
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=79.78 E-value=15 Score=26.60 Aligned_cols=74 Identities=14% Similarity=0.191 Sum_probs=44.1
Q ss_pred CCchhhHHhhhhc-------CCCCEEEEECCChH-HHHHHHHHHHh----cCCCeEEecCCCCHHHHHHHHHccCCcEEE
Q 024671 43 LSDRESVLASVFD-------KYPNMIVVDYTVPA-AVNGNAELYSK----VGVPFVMGTTGGDRVRLHETIENSNVYAVI 110 (264)
Q Consensus 43 ~~dl~~~l~~~~~-------~~~d~VvIDFS~p~-~~~~~~~~~~~----~g~plViGTTG~~~~~~~~l~~~~~~~~v~ 110 (264)
..+.++++..+.. ..+|.|++|...|. .-.+.++...+ ..+|+|+-|+..+.+......+ .+.--++
T Consensus 34 ~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~-~g~~~~l 112 (140)
T 1k68_A 34 VRDGMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSYD-LHVNCYI 112 (140)
T ss_dssp ECSHHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHHH-TTCSEEE
T ss_pred ECCHHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHHHHHcCcccccccEEEEecCCcHHHHHHHHH-hchhhee
Confidence 3455666665554 57898899999885 33455666555 3578887776666554444333 3443344
Q ss_pred ccchhHH
Q 024671 111 SPQMGKQ 117 (264)
Q Consensus 111 s~NfSlG 117 (264)
.-.++..
T Consensus 113 ~kP~~~~ 119 (140)
T 1k68_A 113 TKSANLS 119 (140)
T ss_dssp ECCSSHH
T ss_pred cCCCCHH
Confidence 4445543
No 116
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=79.26 E-value=14 Score=27.58 Aligned_cols=79 Identities=13% Similarity=0.106 Sum_probs=44.8
Q ss_pred eEeecCCchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHh------cCCCeEEecCCCCHHHHHHHHHccCCcEEE
Q 024671 38 IQVHGLSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK------VGVPFVMGTTGGDRVRLHETIENSNVYAVI 110 (264)
Q Consensus 38 i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~------~g~plViGTTG~~~~~~~~l~~~~~~~~v~ 110 (264)
+.+....+.+++++.+....+|.|++|...|.. -.+.++...+ ..+|+|+-|+..+.+...... ..+.--++
T Consensus 39 ~~v~~~~~~~~al~~~~~~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~~~~~~~~~~~-~~Ga~~~l 117 (143)
T 3m6m_D 39 HKVLCVNGAEQVLDAMAEEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACE-QAGARAFL 117 (143)
T ss_dssp CEEEEESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESCCCHHHHHHHH-HTTCSEEE
T ss_pred CeEEEeCCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCCCCHHHHHHHH-HcChhhee
Confidence 333334566677776666789988999998862 2334444332 236777766555555444433 34544445
Q ss_pred ccchhHH
Q 024671 111 SPQMGKQ 117 (264)
Q Consensus 111 s~NfSlG 117 (264)
.-.++..
T Consensus 118 ~KP~~~~ 124 (143)
T 3m6m_D 118 AKPVVAA 124 (143)
T ss_dssp ESSCCHH
T ss_pred eCCCCHH
Confidence 4455543
No 117
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=79.15 E-value=4.5 Score=29.94 Aligned_cols=78 Identities=9% Similarity=0.050 Sum_probs=44.1
Q ss_pred eEeecCCchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHhc--CCCeEEecCCCCHHHHHHHHHccCCcEEEccch
Q 024671 38 IQVHGLSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISPQM 114 (264)
Q Consensus 38 i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~--g~plViGTTG~~~~~~~~l~~~~~~~~v~s~Nf 114 (264)
+.+....+.++++..+....||.|++|...|.. -.+.++...+. .+|+|+-|.--+.+......+ .+.--++.-.+
T Consensus 40 ~~v~~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~-~g~~~~l~KP~ 118 (135)
T 3snk_A 40 YDVRVSETDDFLKGPPADTRPGIVILDLGGGDLLGKPGIVEARALWATVPLIAVSDELTSEQTRVLVR-MNASDWLHKPL 118 (135)
T ss_dssp EEEEEECGGGGGGCCCTTCCCSEEEEEEETTGGGGSTTHHHHHGGGTTCCEEEEESCCCHHHHHHHHH-TTCSEEEESSC
T ss_pred eEEEEeccHHHHHHHHhccCCCEEEEeCCCCCchHHHHHHHHHhhCCCCcEEEEeCCCCHHHHHHHHH-cCcHhhccCCC
Confidence 444444566677766666779988999998853 23344444443 577776554444444433333 44333444445
Q ss_pred hH
Q 024671 115 GK 116 (264)
Q Consensus 115 Sl 116 (264)
+.
T Consensus 119 ~~ 120 (135)
T 3snk_A 119 DG 120 (135)
T ss_dssp CH
T ss_pred CH
Confidence 54
No 118
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=78.98 E-value=15 Score=32.48 Aligned_cols=97 Identities=12% Similarity=-0.008 Sum_probs=58.8
Q ss_pred CCCeEEEEEcCCCccccccccccCcee-EeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEecC
Q 024671 12 AGLELVPVSFGTEEESGQKVEVCGKEI-QVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT 90 (264)
Q Consensus 12 ~~~eLv~~~~~~~~~~g~~~~~~~~~i-~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGTT 90 (264)
++.+|+++.+...... +.. ....++ .++ .|.++.|++ ..+| +|+=.|-+..=.+.+..|++.|+++.+=-.
T Consensus 55 ~~~~lvav~d~~~~~a-~~~-a~~~g~~~~y--~d~~ell~~---~~iD-aV~IatP~~~H~~~a~~al~aGkhVl~EKP 126 (393)
T 4fb5_A 55 ERPRLVHLAEANAGLA-EAR-AGEFGFEKAT--ADWRALIAD---PEVD-VVSVTTPNQFHAEMAIAALEAGKHVWCEKP 126 (393)
T ss_dssp CCCEEEEEECC--TTH-HHH-HHHHTCSEEE--SCHHHHHHC---TTCC-EEEECSCGGGHHHHHHHHHHTTCEEEECSC
T ss_pred CCcEEEEEECCCHHHH-HHH-HHHhCCCeec--CCHHHHhcC---CCCc-EEEECCChHHHHHHHHHHHhcCCeEEEccC
Confidence 5789999887543211 111 001122 233 477777653 4578 566666667779999999999999887432
Q ss_pred -CCCHHH---HHHHHHccCCcEEEccchhH
Q 024671 91 -GGDRVR---LHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 91 -G~~~~~---~~~l~~~~~~~~v~s~NfSl 116 (264)
..+.++ +.++++++++.+....|+-.
T Consensus 127 la~~~~ea~~l~~~a~~~g~~l~vg~~~R~ 156 (393)
T 4fb5_A 127 MAPAYADAERMLATAERSGKVAALGYNYIQ 156 (393)
T ss_dssp SCSSHHHHHHHHHHHHHSSSCEEECCGGGG
T ss_pred CcccHHHHHHhhhhHHhcCCcccccccccc
Confidence 133443 45556667777888887544
No 119
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=78.75 E-value=2.6 Score=38.27 Aligned_cols=88 Identities=19% Similarity=0.185 Sum_probs=54.6
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcC-CC-cc----------ccc----------cccccCceeEeecCCchhhHHhhhhcCC
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFG-TE-EE----------SGQ----------KVEVCGKEIQVHGLSDRESVLASVFDKY 57 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~-~~-~~----------~g~----------~~~~~~~~i~i~~~~dl~~~l~~~~~~~ 57 (264)
+|+.+.+.+. .++++|+++.+. .. +. -|+ .+.+.+..+.+....|.++. . +.+..
T Consensus 14 iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~~~l-~-~~~~~ 91 (335)
T 1u8f_O 14 IGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPSKI-K-WGDAG 91 (335)
T ss_dssp HHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGGC-C-TTTTT
T ss_pred HHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCHHHC-c-cccCC
Confidence 5899999987 689999988763 11 10 000 11112223444444444432 0 11135
Q ss_pred CCEEEEECCChHHHHHHHHHHHhcCCCeEEecCC
Q 024671 58 PNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTG 91 (264)
Q Consensus 58 ~d~VvIDFS~p~~~~~~~~~~~~~g~plViGTTG 91 (264)
+| +|++-|-.....+.+..+++.|...|+-+..
T Consensus 92 vD-vV~eatg~~~~~e~a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 92 AE-YVVESTGVFTTMEKAGAHLQGGAKRVIISAP 124 (335)
T ss_dssp CC-EEEECSSSCCSHHHHGGGGGGTCSEEEESSC
T ss_pred CC-EEEECCCchhhHHHHHHHHhCCCeEEEeccC
Confidence 78 7898887788888888999999887777654
No 120
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=78.00 E-value=3.4 Score=37.07 Aligned_cols=87 Identities=16% Similarity=0.081 Sum_probs=54.7
Q ss_pred ChHHHHHHHH--hCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAAD--AAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~--~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
||+.+++.+. .+++++++..+..+...++... ...+++.. .++.++.++......+| +|++-|-++.-.+++..|
T Consensus 15 iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a-~~~g~~~~-~~~~e~ll~~~~~~~iD-vV~~atp~~~h~~~a~~a 91 (312)
T 1nvm_B 15 IGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARA-QRMGVTTT-YAGVEGLIKLPEFADID-FVFDATSASAHVQNEALL 91 (312)
T ss_dssp HHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHH-HHTTCCEE-SSHHHHHHHSGGGGGEE-EEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHH-HHcCCCcc-cCCHHHHHhccCCCCCc-EEEECCChHHHHHHHHHH
Confidence 5788888874 4789999887754322122210 01122221 23555554421112467 899999999999999999
Q ss_pred Hhc--CCCeEEecC
Q 024671 79 SKV--GVPFVMGTT 90 (264)
Q Consensus 79 ~~~--g~plViGTT 90 (264)
++. |+++++-+.
T Consensus 92 l~a~~Gk~Vi~ekp 105 (312)
T 1nvm_B 92 RQAKPGIRLIDLTP 105 (312)
T ss_dssp HHHCTTCEEEECST
T ss_pred HHhCCCCEEEEcCc
Confidence 999 999887443
No 121
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=77.93 E-value=12 Score=26.89 Aligned_cols=72 Identities=10% Similarity=0.133 Sum_probs=40.0
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHh----cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSK----VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~----~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSl 116 (264)
.+.++++..+....+|.|++|+..|. .-.+.++...+ ..+|+|+-|..-+.+......+ .+.--++.-.++.
T Consensus 36 ~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~-~ga~~~l~KP~~~ 112 (128)
T 1jbe_A 36 EDGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTAEAKKENIIAAAQ-AGASGYVVKPFTA 112 (128)
T ss_dssp SSHHHHHHHHTTCCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEESSCCHHHHHHHHH-TTCSEEEESSCCH
T ss_pred CCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEecCccHHHHHHHHH-hCcCceeecCCCH
Confidence 34555666555567898899999885 23445555544 2467666655444444433333 3433334444554
No 122
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=77.67 E-value=15 Score=29.12 Aligned_cols=117 Identities=12% Similarity=-0.019 Sum_probs=62.0
Q ss_pred ChHHHHHHHHhC-CCeEEEEEcCCCccccccccccCceeE-ee-cCCchhhHHhhh-hcCCCCEEEEECCC-hHHHHHHH
Q 024671 1 MGKAVIKAADAA-GLELVPVSFGTEEESGQKVEVCGKEIQ-VH-GLSDRESVLASV-FDKYPNMIVVDYTV-PAAVNGNA 75 (264)
Q Consensus 1 MG~~i~~~~~~~-~~eLv~~~~~~~~~~g~~~~~~~~~i~-i~-~~~dl~~~l~~~-~~~~~d~VvIDFS~-p~~~~~~~ 75 (264)
||+.+++.+.+. |+++++ ++..+... ..+ ...++. +. ...+. +.+.+. .-..+| ++|..+. ++.....+
T Consensus 50 ~G~~~a~~L~~~~g~~V~v-id~~~~~~-~~~--~~~g~~~~~gd~~~~-~~l~~~~~~~~ad-~vi~~~~~~~~~~~~~ 123 (183)
T 3c85_A 50 IGTGAYDELRARYGKISLG-IEIREEAA-QQH--RSEGRNVISGDATDP-DFWERILDTGHVK-LVLLAMPHHQGNQTAL 123 (183)
T ss_dssp HHHHHHHHHHHHHCSCEEE-EESCHHHH-HHH--HHTTCCEEECCTTCH-HHHHTBCSCCCCC-EEEECCSSHHHHHHHH
T ss_pred HHHHHHHHHHhccCCeEEE-EECCHHHH-HHH--HHCCCCEEEcCCCCH-HHHHhccCCCCCC-EEEEeCCChHHHHHHH
Confidence 688999888877 888875 45433211 001 011121 11 11222 223332 123578 6777554 45555556
Q ss_pred HHHHhcC-CCeEEecCCCCHHHHHHHHHccCCcEEEccchhHHHHHHHHHH
Q 024671 76 ELYSKVG-VPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLAAM 125 (264)
Q Consensus 76 ~~~~~~g-~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlGv~ll~~~~ 125 (264)
..+.+.+ ...|+..+ -+.+..+.+.+ .+.-.+++|....|-.+...++
T Consensus 124 ~~~~~~~~~~~ii~~~-~~~~~~~~l~~-~G~~~vi~p~~~~a~~l~~~~~ 172 (183)
T 3c85_A 124 EQLQRRNYKGQIAAIA-EYPDQLEGLLE-SGVDAAFNIYSEAGSGFARHVC 172 (183)
T ss_dssp HHHHHTTCCSEEEEEE-SSHHHHHHHHH-HTCSEEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEE-CCHHHHHHHHH-cCCCEEEchHHHHHHHHHHHHH
Confidence 6666665 33444333 34555555544 4677889999888865555444
No 123
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=77.26 E-value=16 Score=25.90 Aligned_cols=71 Identities=13% Similarity=0.193 Sum_probs=38.1
Q ss_pred chhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHh--cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhH
Q 024671 45 DRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 45 dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~--~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSl 116 (264)
+.++++..+....||.|++|+..|.. -.+.++...+ ..+|+|+=|.--+.+......+ .+.--++.-.++.
T Consensus 35 ~~~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~-~g~~~~l~KP~~~ 108 (120)
T 1tmy_A 35 NGREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIK-AGAKDFIVKPFQP 108 (120)
T ss_dssp SHHHHHHHHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECTTCHHHHHHHHH-TTCCEEEESSCCH
T ss_pred CHHHHHHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCCCCHHHHHHHHH-hCcceeEeCCCCH
Confidence 34445555545578988999999852 3445555444 3567666554444443333333 4433333334544
No 124
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=77.13 E-value=6.1 Score=28.75 Aligned_cols=53 Identities=11% Similarity=0.031 Sum_probs=33.6
Q ss_pred CCchhhHHhhhhcC-CCCEEEEECCChH--HHHHHHHHHHhc--CCCeEEecCCCCHH
Q 024671 43 LSDRESVLASVFDK-YPNMIVVDYTVPA--AVNGNAELYSKV--GVPFVMGTTGGDRV 95 (264)
Q Consensus 43 ~~dl~~~l~~~~~~-~~d~VvIDFS~p~--~~~~~~~~~~~~--g~plViGTTG~~~~ 95 (264)
..+.++++..+... .+|.|++|+..|. .-.+.++...+. .+|+|+-|...+.+
T Consensus 35 ~~~~~~a~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~ 92 (132)
T 2rdm_A 35 VSSGAKAIEMLKSGAAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGHAALE 92 (132)
T ss_dssp ESSHHHHHHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESSCCTT
T ss_pred ECCHHHHHHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCCccHH
Confidence 34555666665555 6898899999885 445556555543 57777766544443
No 125
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=76.81 E-value=18 Score=25.81 Aligned_cols=73 Identities=14% Similarity=0.115 Sum_probs=37.7
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHh-cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSK-VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQ 117 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~-~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlG 117 (264)
.+..+++..+....||.|++|...|. .-.+.++...+ ..+|+|+-|+.-+.+......+ .+.--++.-.++..
T Consensus 34 ~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~~~~~~~~~~-~g~~~~l~KP~~~~ 108 (123)
T 1xhf_A 34 TDGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLE-IGADDYITKPFNPR 108 (123)
T ss_dssp SSHHHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESCCSHHHHHHHHH-HTCSEEEESSCCHH
T ss_pred CCHHHHHHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECCCChHHHHHHHh-cCcceEEeCCCCHH
Confidence 34455555555567898899999874 22344444433 4566665554344443333333 34333333344443
No 126
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=76.77 E-value=8.6 Score=36.47 Aligned_cols=66 Identities=14% Similarity=0.180 Sum_probs=50.6
Q ss_pred EEEEECCChHHHHHHHHHHHhcCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHHHHHHHHHHHHHHH
Q 024671 60 MIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLAAMEIMAE 130 (264)
Q Consensus 60 ~VvIDFS~p~~~~~~~~~~~~~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlGv~ll~~~~~~aa~ 130 (264)
.+.|| ..|+++..-++.+ +.+.|+|-..|+-+-+++-.++...+.|++..++ -++.+.++++.+.+
T Consensus 157 PlsID-~dp~vleaale~~-~d~~pLIns~t~en~~~~~~la~~y~~~vV~~~~---~l~~l~~lv~~a~~ 222 (445)
T 2h9a_A 157 PFILI-GTPEQLAAALETE-GANNPLLYAATADNYEQMVELAKKYNVPLTVSAK---GLDALAELVQKITA 222 (445)
T ss_dssp CEEEE-SCHHHHHHHHHHH-GGGCCEEEEECTTTHHHHHHHHHHHTCCEEEECS---SHHHHHHHHHHHHH
T ss_pred CEEEE-CCHHHHHHHHHhc-CCCCCEEEECCHHHHHHHHHHHHHhCCeEEEEcC---CHHHHHHHHHHHHH
Confidence 37899 8899888888877 4478899888988777777777777888766555 46777777777654
No 127
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=76.64 E-value=22 Score=26.72 Aligned_cols=80 Identities=11% Similarity=0.120 Sum_probs=45.0
Q ss_pred eeEeecCCchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHh--cCCCeEEecCCCCHHHHHHHHHccCCcEEEccc
Q 024671 37 EIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQ 113 (264)
Q Consensus 37 ~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~--~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~N 113 (264)
++.+....+.++++..+....+|.|++|...|.. -.+.++...+ ..+|+|+-|.--+.+......+..+.--++.-.
T Consensus 38 g~~v~~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP 117 (153)
T 3hv2_A 38 PYTLHFARDATQALQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDPDLKLIAKAINEGEIYRYLSKP 117 (153)
T ss_dssp SCEEEEESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCCCHHHHHHHHHTTCCSEEECSS
T ss_pred CcEEEEECCHHHHHHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCCCHHHHHHHHhCCCcceEEeCC
Confidence 3444445677777777777789988999998752 2344444433 356666655434444444443333244444444
Q ss_pred hhH
Q 024671 114 MGK 116 (264)
Q Consensus 114 fSl 116 (264)
++.
T Consensus 118 ~~~ 120 (153)
T 3hv2_A 118 WDD 120 (153)
T ss_dssp CCH
T ss_pred CCH
Confidence 554
No 128
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=76.55 E-value=31 Score=28.44 Aligned_cols=69 Identities=9% Similarity=0.110 Sum_probs=45.7
Q ss_pred HhhhhcCCCCEEEEECCCh---HHHHHHHHHHHhcC----CCeEEecCCCCHHHHHHHHHccCCc-EEEccchhHHHHHH
Q 024671 50 LASVFDKYPNMIVVDYTVP---AAVNGNAELYSKVG----VPFVMGTTGGDRVRLHETIENSNVY-AVISPQMGKQVVAF 121 (264)
Q Consensus 50 l~~~~~~~~d~VvIDFS~p---~~~~~~~~~~~~~g----~plViGTTG~~~~~~~~l~~~~~~~-~v~s~NfSlGv~ll 121 (264)
.+.+....||.|.+=++.+ ..+.+.++.+.+.+ +|+++|=.+++++.. +. ++ -.|++|.+-++.+.
T Consensus 132 ~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~~~v~vGG~~~~~~~~----~~--~gad~~~~da~~av~~~ 205 (210)
T 1y80_A 132 VEAVKKYQPDIVGMSALLTTTMMNMKSTIDALIAAGLRDRVKVIVGGAPLSQDFA----DE--IGADGYAPDAASATELC 205 (210)
T ss_dssp HHHHHHHCCSEEEEECCSGGGTHHHHHHHHHHHHTTCGGGCEEEEESTTCCHHHH----HH--HTCSEECSSHHHHHHHH
T ss_pred HHHHHHcCCCEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEECCCCCHHHH----HH--cCCeEEECCHHHHHHHH
Confidence 3444445799777777654 34666777776655 899999888875332 11 33 38999999888665
Q ss_pred HHH
Q 024671 122 LAA 124 (264)
Q Consensus 122 ~~~ 124 (264)
.++
T Consensus 206 ~~l 208 (210)
T 1y80_A 206 RQL 208 (210)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
No 129
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=76.51 E-value=13 Score=27.86 Aligned_cols=72 Identities=10% Similarity=0.116 Sum_probs=39.8
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHhc--CCCeEEecCCCCHHHHHHHHHccCCcEEEccchhH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~~--g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSl 116 (264)
.+.++++..+....+|.|++|...|. .-.+.++...+. .+|+|+-|..-+.+...... ..+.--++.-.++.
T Consensus 38 ~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~-~~g~~~~l~kp~~~ 112 (153)
T 3cz5_A 38 ADAGEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMHQGSAFALKAF-EAGASGYVTKSSDP 112 (153)
T ss_dssp SSHHHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESCCSHHHHHHHH-HTTCSEEEETTSCT
T ss_pred CCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECCCCHHHHHHHH-HCCCcEEEecCCCH
Confidence 45566666666667998899998874 234445554443 56776665444444433333 34433333333444
No 130
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=76.25 E-value=33 Score=28.60 Aligned_cols=41 Identities=15% Similarity=0.270 Sum_probs=30.9
Q ss_pred HhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEecC
Q 024671 50 LASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT 90 (264)
Q Consensus 50 l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGTT 90 (264)
+..+....+|.++|--..++...+.++.+.+.|+|+|.--+
T Consensus 54 ~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~ 94 (291)
T 3l49_A 54 IQTLIAQKPDAIIEQLGNLDVLNPWLQKINDAGIPLFTVDT 94 (291)
T ss_dssp HHHHHHHCCSEEEEESSCHHHHHHHHHHHHHTTCCEEEESC
T ss_pred HHHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCcEEEecC
Confidence 34444457896666777778888999999999999887544
No 131
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=76.21 E-value=8.2 Score=27.56 Aligned_cols=73 Identities=12% Similarity=0.160 Sum_probs=39.9
Q ss_pred CCchhhHHhhhhcCCCCEEEEECCCh-H-HHHHHHHHHHhc----CCCeEEecCCCCHHHHHHHHHccCCcEEEccchhH
Q 024671 43 LSDRESVLASVFDKYPNMIVVDYTVP-A-AVNGNAELYSKV----GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 43 ~~dl~~~l~~~~~~~~d~VvIDFS~p-~-~~~~~~~~~~~~----g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSl 116 (264)
..+.++++..+....+|.|++|...| . .-.+.++...+. .+|+|+- +..+.+..... ...+.--++.-.++.
T Consensus 35 ~~~~~~a~~~~~~~~~dlvi~d~~~~~~~~g~~~~~~l~~~~~~~~~~ii~~-~~~~~~~~~~~-~~~g~~~~l~kp~~~ 112 (127)
T 2gkg_A 35 TTDGKGSVEQIRRDRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPIVII-GNPDGFAQHRK-LKAHADEYVAKPVDA 112 (127)
T ss_dssp ECCHHHHHHHHHHHCCSEEEEESBCGGGCBHHHHHHHHHHSTTTTTSCEEEE-ECGGGHHHHHH-STTCCSEEEESSCCH
T ss_pred ecCHHHHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCccccCCCEEEE-ecCCchhHHHH-HHhCcchheeCCCCH
Confidence 34555566655556799889999988 3 234556665553 5776665 33333333222 234433344444554
Q ss_pred H
Q 024671 117 Q 117 (264)
Q Consensus 117 G 117 (264)
.
T Consensus 113 ~ 113 (127)
T 2gkg_A 113 D 113 (127)
T ss_dssp H
T ss_pred H
Confidence 3
No 132
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=76.20 E-value=25 Score=27.17 Aligned_cols=113 Identities=15% Similarity=0.060 Sum_probs=58.8
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeE-eec-CCchhhHHhhhhcCCCCEEEEECCChHHHH-HHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQ-VHG-LSDRESVLASVFDKYPNMIVVDYTVPAAVN-GNAEL 77 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~-i~~-~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~-~~~~~ 77 (264)
||+.+++.+.+.|++++. +++.+.... .+. ...++. +.. ..+. +.+....-..+| ++|..+.+.... ..+..
T Consensus 30 iG~~la~~L~~~g~~V~v-id~~~~~~~-~~~-~~~g~~~~~~d~~~~-~~l~~~~~~~ad-~Vi~~~~~~~~~~~~~~~ 104 (155)
T 2g1u_A 30 LGSLIANLASSSGHSVVV-VDKNEYAFH-RLN-SEFSGFTVVGDAAEF-ETLKECGMEKAD-MVFAFTNDDSTNFFISMN 104 (155)
T ss_dssp HHHHHHHHHHHTTCEEEE-EESCGGGGG-GSC-TTCCSEEEESCTTSH-HHHHTTTGGGCS-EEEECSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEE-EECCHHHHH-HHH-hcCCCcEEEecCCCH-HHHHHcCcccCC-EEEEEeCCcHHHHHHHHH
Confidence 588899888888888774 454332111 010 011221 111 1222 223322113578 678777655444 44445
Q ss_pred HHh-cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHHHHHH
Q 024671 78 YSK-VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAF 121 (264)
Q Consensus 78 ~~~-~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlGv~ll 121 (264)
+.. .+...+++.+- +....+.+.+ .+.. +++|....+-.+.
T Consensus 105 ~~~~~~~~~iv~~~~-~~~~~~~l~~-~G~~-vi~p~~~~a~~l~ 146 (155)
T 2g1u_A 105 ARYMFNVENVIARVY-DPEKIKIFEE-NGIK-TICPAVLMIEKVK 146 (155)
T ss_dssp HHHTSCCSEEEEECS-SGGGHHHHHT-TTCE-EECHHHHHHHHHH
T ss_pred HHHHCCCCeEEEEEC-CHHHHHHHHH-CCCc-EEcHHHHHHHHHH
Confidence 555 66666666552 2233334443 6677 9999988875443
No 133
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=75.82 E-value=14 Score=26.04 Aligned_cols=71 Identities=14% Similarity=0.198 Sum_probs=37.1
Q ss_pred chhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHH-hcCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhH
Q 024671 45 DRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYS-KVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 45 dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~-~~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSl 116 (264)
+.++++..+....||.|++|...|.. -.+.++... ...+|+|+-|+..+.+......+ .+.--++.-.++.
T Consensus 33 ~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~~~~~~~~~~-~g~~~~l~Kp~~~ 105 (120)
T 2a9o_A 33 NGREALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKDSEFDKVIGLE-LGADDYVTKPFSN 105 (120)
T ss_dssp SHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCCSHHHHHHHHH-HTCSEEEESSCCH
T ss_pred CHHHHHHHHHhCCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCCchHHHHHHHh-CCHhheEeCCCCH
Confidence 34445554445578988999998742 233343333 25677777665555443333322 3433333333444
No 134
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=75.21 E-value=12 Score=35.51 Aligned_cols=70 Identities=9% Similarity=0.099 Sum_probs=50.5
Q ss_pred CCC-EEEEECCChHHHHHHHHHHHhcCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHHHHHHHHHHHHHHH
Q 024671 57 YPN-MIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLAAMEIMAE 130 (264)
Q Consensus 57 ~~d-~VvIDFS~p~~~~~~~~~~~~~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlGv~ll~~~~~~aa~ 130 (264)
..| .++||=..|+++..-++.|. .++|+|-|.|.-+-+++-.++.+.+.|++..+| ..+.+.++++.+.+
T Consensus 153 ~~dvPL~IDS~dpevleaALea~a-~~~plI~sat~dn~e~m~~lAa~y~~pVi~~~~---dl~~lkelv~~a~~ 223 (446)
T 4djd_C 153 ATQLNLVLMADDPDVLKEALAGVA-DRKPLLYAATGANYEAMTALAKENNCPLAVYGN---GLEELAELVDKIVA 223 (446)
T ss_dssp TCCSEEEEECSCHHHHHHHHGGGG-GGCCEEEEECTTTHHHHHHHHHHTTCCEEEECS---SHHHHHHHHHHHHH
T ss_pred hCCCCEEEecCCHHHHHHHHHhhc-CcCCeeEecchhhHHHHHHHHHHcCCcEEEEec---cHHHHHHHHHHHHH
Confidence 345 56889888888888887763 467888888844445666777777888877777 56777777766654
No 135
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=74.97 E-value=13 Score=27.38 Aligned_cols=79 Identities=10% Similarity=0.196 Sum_probs=46.8
Q ss_pred EeecCCchhhHHhhhhc-----CCCCEEEEECCChHH-HHHHHHHHHh------cCCCeEEecCCCCHHHHHHHHHccCC
Q 024671 39 QVHGLSDRESVLASVFD-----KYPNMIVVDYTVPAA-VNGNAELYSK------VGVPFVMGTTGGDRVRLHETIENSNV 106 (264)
Q Consensus 39 ~i~~~~dl~~~l~~~~~-----~~~d~VvIDFS~p~~-~~~~~~~~~~------~g~plViGTTG~~~~~~~~l~~~~~~ 106 (264)
.+....+.++++..+.. ..+|.|++|...|.. -.+.++...+ ..+|+|+-|+..+.+......+..+.
T Consensus 37 ~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~ 116 (146)
T 3ilh_A 37 EIQSVTSGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQHFQPMKNKSIVCLLSSSLDPRDQAKAEASDWV 116 (146)
T ss_dssp EEEEESSHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHHCGGGTTTCEEEEECSSCCHHHHHHHHHCSSC
T ss_pred eeeecCCHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHHhhhhccCCCeEEEEeCCCChHHHHHHHhcCCc
Confidence 33334566677766665 679988999998852 3445555544 35666666655555555444444324
Q ss_pred cEEEccchhHH
Q 024671 107 YAVISPQMGKQ 117 (264)
Q Consensus 107 ~~v~s~NfSlG 117 (264)
--++.-.++..
T Consensus 117 ~~~l~KP~~~~ 127 (146)
T 3ilh_A 117 DYYVSKPLTAN 127 (146)
T ss_dssp CEEECSSCCHH
T ss_pred ceeeeCCCCHH
Confidence 44565556654
No 136
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=74.68 E-value=11 Score=27.76 Aligned_cols=74 Identities=12% Similarity=0.124 Sum_probs=41.0
Q ss_pred CCchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHh----cCCCeEEecCCCCHH-HHHHHHHccCCcEEEccchhH
Q 024671 43 LSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK----VGVPFVMGTTGGDRV-RLHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 43 ~~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~----~g~plViGTTG~~~~-~~~~l~~~~~~~~v~s~NfSl 116 (264)
..+.++++..+....||.|++|...|.. -.+.++...+ ..+|+|+-| +.... ....-+...+.--++.-.++.
T Consensus 36 ~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s-~~~~~~~~~~~~~~~g~~~~l~kP~~~ 114 (140)
T 3grc_A 36 VHSAAQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVS-ANAREGELEFNSQPLAVSTWLEKPIDE 114 (140)
T ss_dssp ECSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEEC-TTHHHHHHHHCCTTTCCCEEECSSCCH
T ss_pred ECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEe-cCCChHHHHHHhhhcCCCEEEeCCCCH
Confidence 3466667776666789988999998752 3445555443 356666655 44332 222122233443355555665
Q ss_pred H
Q 024671 117 Q 117 (264)
Q Consensus 117 G 117 (264)
.
T Consensus 115 ~ 115 (140)
T 3grc_A 115 N 115 (140)
T ss_dssp H
T ss_pred H
Confidence 4
No 137
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=74.66 E-value=8.4 Score=31.36 Aligned_cols=83 Identities=16% Similarity=0.019 Sum_probs=49.2
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCcccc---cccc--ccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESG---QKVE--VCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNA 75 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g---~~~~--~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~ 75 (264)
||+.+++.+.+.|+++.. +++.+.... +..+ +....+.. .++++++. .+| +||-.+.|..+.+.+
T Consensus 12 ~G~~ia~~l~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-----~~D-~Vi~~~~~~~~~~~~ 81 (212)
T 1jay_A 12 LGKGLALRLATLGHEIVV-GSRREEKAEAKAAEYRRIAGDASITG---MKNEDAAE-----ACD-IAVLTIPWEHAIDTA 81 (212)
T ss_dssp HHHHHHHHHHTTTCEEEE-EESSHHHHHHHHHHHHHHHSSCCEEE---EEHHHHHH-----HCS-EEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHHHhccccccCCCCh---hhHHHHHh-----cCC-EEEEeCChhhHHHHH
Confidence 789999888888888775 444321110 0000 00001221 34444443 478 789998888877766
Q ss_pred HHHHh--cCCCeEEecCCCC
Q 024671 76 ELYSK--VGVPFVMGTTGGD 93 (264)
Q Consensus 76 ~~~~~--~g~plViGTTG~~ 93 (264)
+...+ .+..+|..++|++
T Consensus 82 ~~l~~~~~~~~vi~~~~g~~ 101 (212)
T 1jay_A 82 RDLKNILREKIVVSPLVPVS 101 (212)
T ss_dssp HHTHHHHTTSEEEECCCCEE
T ss_pred HHHHHHcCCCEEEEcCCCcC
Confidence 54322 3778899999987
No 138
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=74.58 E-value=9 Score=27.72 Aligned_cols=75 Identities=11% Similarity=0.170 Sum_probs=40.0
Q ss_pred eecCCchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHhc----CCCeEEecCCCC-HHHHHHHHHccCCcEEEccc
Q 024671 40 VHGLSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV----GVPFVMGTTGGD-RVRLHETIENSNVYAVISPQ 113 (264)
Q Consensus 40 i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~----g~plViGTTG~~-~~~~~~l~~~~~~~~v~s~N 113 (264)
+....+.++++..+....+|.|++|+..|.. -.+.++...+. .+|+|+ .|+.. .+......+..-...+ .-.
T Consensus 34 v~~~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~-~s~~~~~~~~~~~~~~g~~~~l-~KP 111 (129)
T 1p6q_A 34 ITAAGDGEQGMKIMAQNPHHLVISDFNMPKMDGLGLLQAVRANPATKKAAFII-LTAQGDRALVQKAAALGANNVL-AKP 111 (129)
T ss_dssp EECCSSHHHHHHHHHTSCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCEEEE-CCSCCCHHHHHHHHHHTCSCEE-CCC
T ss_pred EEecCCHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCCEEE-EeCCCCHHHHHHHHHcCCCEEE-ECC
Confidence 3334556666666666678988999998852 34555555443 455555 44554 4333333332223333 333
Q ss_pred hhH
Q 024671 114 MGK 116 (264)
Q Consensus 114 fSl 116 (264)
++.
T Consensus 112 ~~~ 114 (129)
T 1p6q_A 112 FTI 114 (129)
T ss_dssp SSH
T ss_pred CCH
Confidence 444
No 139
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=74.52 E-value=16 Score=27.33 Aligned_cols=79 Identities=11% Similarity=0.043 Sum_probs=46.5
Q ss_pred eEeecCCchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHhc--CCCeEEecCCCCHHHHHHHHHccCCcEEEccch
Q 024671 38 IQVHGLSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISPQM 114 (264)
Q Consensus 38 i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~--g~plViGTTG~~~~~~~~l~~~~~~~~v~s~Nf 114 (264)
..+....+.++++..+....+|.|++|...|.. -.+.++...+. .+|+|+-|...+.+...... ..+.--++.-.+
T Consensus 47 ~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~-~~g~~~~l~Kp~ 125 (150)
T 4e7p_A 47 ESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTFKRAGYFERAV-KAGVDAYVLKER 125 (150)
T ss_dssp EEEEEESSHHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHH-HTTCSEEEETTS
T ss_pred EEEEEECCHHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCCCCHHHHHHHH-HCCCcEEEecCC
Confidence 334444677777777777789988999998753 34555555443 56666666555554444433 345443444445
Q ss_pred hHH
Q 024671 115 GKQ 117 (264)
Q Consensus 115 SlG 117 (264)
+..
T Consensus 126 ~~~ 128 (150)
T 4e7p_A 126 SIA 128 (150)
T ss_dssp CHH
T ss_pred CHH
Confidence 543
No 140
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=74.13 E-value=7.1 Score=28.48 Aligned_cols=74 Identities=9% Similarity=0.085 Sum_probs=41.7
Q ss_pred cCCchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHhc----CCCeEEecCCCCHHHHHHHHHccCCcEEEccchhH
Q 024671 42 GLSDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSKV----GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 42 ~~~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~~----g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSl 116 (264)
...+.++++..+....||.|++|...|. .-.+.++...+. .+|+|+-|. ....+. .-+...+.--++.-.++.
T Consensus 32 ~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~-~~~~~~-~~~~~~g~~~~l~KP~~~ 109 (133)
T 3nhm_A 32 TAADGASGLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSG-YAPRTE-GPADQPVPDAYLVKPVKP 109 (133)
T ss_dssp EESSHHHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEES-CCC------TTSCCCSEEEESSCCH
T ss_pred EECCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeC-CCcHhH-HHHhhcCCceEEeccCCH
Confidence 3456666777666678998899999875 234555555554 567666554 433333 222234433345455665
Q ss_pred H
Q 024671 117 Q 117 (264)
Q Consensus 117 G 117 (264)
.
T Consensus 110 ~ 110 (133)
T 3nhm_A 110 P 110 (133)
T ss_dssp H
T ss_pred H
Confidence 4
No 141
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=73.97 E-value=6.4 Score=28.26 Aligned_cols=72 Identities=17% Similarity=0.138 Sum_probs=35.8
Q ss_pred chhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHhc----CCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHH
Q 024671 45 DRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV----GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQ 117 (264)
Q Consensus 45 dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~----g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlG 117 (264)
+.++++..+....||.|++|+..|.. -.+.++...+. .+|+|+-|...+.+...... ..+.--++.-.++..
T Consensus 33 ~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~-~~g~~~~l~KP~~~~ 109 (124)
T 1mb3_A 33 EGLSALSIARENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAFAMKGDEERIR-EGGCEAYISKPISVV 109 (124)
T ss_dssp CHHHHHHHHHHHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC------CHHHHH-HHTCSEEECSSCCHH
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEEEEECCCCHHHHHHHH-hCCCCEEEeCCCCHH
Confidence 33444544444578988999998852 34555555542 46766655433333232322 234333444456654
No 142
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=73.30 E-value=19 Score=27.00 Aligned_cols=76 Identities=16% Similarity=0.231 Sum_probs=43.9
Q ss_pred cCCCCEEEEECCChHH-HHHHHHHHHh----cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHHHHHHHHHHHHHH
Q 024671 55 DKYPNMIVVDYTVPAA-VNGNAELYSK----VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLAAMEIMA 129 (264)
Q Consensus 55 ~~~~d~VvIDFS~p~~-~~~~~~~~~~----~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlGv~ll~~~~~~aa 129 (264)
...||.|++|+..|.. -.+.++...+ ..+|+|+-|+--+.+......+ .+.--++.-.++.. -|.+.++.+.
T Consensus 57 ~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~-~g~~~~l~KP~~~~--~l~~~i~~~~ 133 (152)
T 3heb_A 57 AGRAQLVLLDLNLPDMTGIDILKLVKENPHTRRSPVVILTTTDDQREIQRCYD-LGANVYITKPVNYE--NFANAIRQLG 133 (152)
T ss_dssp TTCBEEEEECSBCSSSBHHHHHHHHHHSTTTTTSCEEEEESCCCHHHHHHHHH-TTCSEEEECCSSHH--HHHHHHHHHH
T ss_pred cCCCCEEEEeCCCCCCcHHHHHHHHHhcccccCCCEEEEecCCCHHHHHHHHH-CCCcEEEeCCCCHH--HHHHHHHHHH
Confidence 4568988999998852 3455555554 3577777776555554444433 34333444445543 3445556666
Q ss_pred HhcC
Q 024671 130 EQFP 133 (264)
Q Consensus 130 ~~l~ 133 (264)
+++.
T Consensus 134 ~~~~ 137 (152)
T 3heb_A 134 LFFS 137 (152)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 6654
No 143
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=73.29 E-value=5.2 Score=36.66 Aligned_cols=59 Identities=19% Similarity=0.269 Sum_probs=36.3
Q ss_pred CCEEEEECCChHHHHHHHHHHHhcCCCeEEecCC---CCHHHHHHHH--HccCCcEEEccchhHH
Q 024671 58 PNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTG---GDRVRLHETI--ENSNVYAVISPQMGKQ 117 (264)
Q Consensus 58 ~d~VvIDFS~p~~~~~~~~~~~~~g~plViGTTG---~~~~~~~~l~--~~~~~~~v~s~NfSlG 117 (264)
+| ||||.|...........|+++|+++|+.--+ .+.++.++|. +++++.+.|-++..-|
T Consensus 85 ~D-vVV~~t~~~~~a~~~~~AL~aGkhVVtaNkkpla~~~~~~~eL~~A~~~gv~~~~Ea~vg~g 148 (358)
T 1ebf_A 85 PV-ILVDNTSSAYIAGFYTKFVENGISIATPNKKAFSSDLATWKALFSNKPTNGFVYHEATVGAG 148 (358)
T ss_dssp CE-EEEECSCCHHHHTTHHHHHHTTCEEECCCCGGGSSCHHHHHHHTCCCTTCCCEECGGGTTTT
T ss_pred Cc-EEEEcCCChHHHHHHHHHHHCCCeEEecCcccccCCHHHHHHHHHHHHcCCEEEEccccccC
Confidence 46 8999986444444446899999999994333 3334445554 3334556666555555
No 144
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=72.85 E-value=14 Score=27.01 Aligned_cols=73 Identities=15% Similarity=0.100 Sum_probs=38.0
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHh--cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQ 117 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~--~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlG 117 (264)
.+.++++..+....||.|++|...|. .-.+.++...+ ..+|+|+-|.-.+.+......+ .+.--++.-.++..
T Consensus 34 ~~~~~al~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~-~ga~~~l~KP~~~~ 109 (132)
T 3crn_A 34 ATAGEGLAKIENEFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIMVTGYASLENSVFSLN-AGADAYIMKPVNPR 109 (132)
T ss_dssp SSHHHHHHHHHHSCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEEEESCCCHHHHHHHHH-TTCSEEEESSCCHH
T ss_pred CCHHHHHHHHhcCCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEEEeccccHHHHHHHHh-ccchhhccCCCCHH
Confidence 34455565555567898899999885 22344544443 3466665544334443333333 44333333344443
No 145
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=72.83 E-value=14 Score=31.84 Aligned_cols=88 Identities=16% Similarity=0.135 Sum_probs=49.2
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECC-ChHHHHHHHH---
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYT-VPAAVNGNAE--- 76 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS-~p~~~~~~~~--- 76 (264)
||+.+++.+.+.|+++. .+++.+... + .....++.+. .++++++. .+| +||-.+ .|..+...+.
T Consensus 15 ~G~~~a~~l~~~g~~V~-~~~~~~~~~-~--~~~~~g~~~~--~~~~~~~~-----~~D-~vi~~vp~~~~~~~v~~~~~ 82 (301)
T 3cky_A 15 MGKPMAINLLKEGVTVY-AFDLMEANV-A--AVVAQGAQAC--ENNQKVAA-----ASD-IIFTSLPNAGIVETVMNGPG 82 (301)
T ss_dssp THHHHHHHHHHTTCEEE-EECSSHHHH-H--HHHTTTCEEC--SSHHHHHH-----HCS-EEEECCSSHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHCCCeEE-EEeCCHHHH-H--HHHHCCCeec--CCHHHHHh-----CCC-EEEEECCCHHHHHHHHcCcc
Confidence 89999988887789876 345432111 0 1111133332 35555443 478 566555 6666666663
Q ss_pred ---HHHhcCCCeEEecCCC--CHHHHHHH
Q 024671 77 ---LYSKVGVPFVMGTTGG--DRVRLHET 100 (264)
Q Consensus 77 ---~~~~~g~plViGTTG~--~~~~~~~l 100 (264)
.+.+.+..+|.-+||. +.+++.+.
T Consensus 83 ~l~~~l~~~~~vv~~~~~~~~~~~~l~~~ 111 (301)
T 3cky_A 83 GVLSACKAGTVIVDMSSVSPSSTLKMAKV 111 (301)
T ss_dssp CHHHHSCTTCEEEECCCCCHHHHHHHHHH
T ss_pred hHhhcCCCCCEEEECCCCCHHHHHHHHHH
Confidence 2334567778788887 33344443
No 146
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=72.26 E-value=14 Score=33.61 Aligned_cols=88 Identities=19% Similarity=0.191 Sum_probs=55.2
Q ss_pred ChHHHHHHHH-h--CCCeEEEEEcC-----------CCccccc-----------cccccCceeEeecCCchhhH-Hhhhh
Q 024671 1 MGKAVIKAAD-A--AGLELVPVSFG-----------TEEESGQ-----------KVEVCGKEIQVHGLSDRESV-LASVF 54 (264)
Q Consensus 1 MG~~i~~~~~-~--~~~eLv~~~~~-----------~~~~~g~-----------~~~~~~~~i~i~~~~dl~~~-l~~~~ 54 (264)
.||.+.+++. + +++||+++-+. .....|+ .+.+.+..+.+....|.++. +.
T Consensus 12 IGr~llR~l~~~~~p~~eivaInd~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~~~dp~~i~w~--- 88 (337)
T 1rm4_O 12 IGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDRNPVNLPWG--- 88 (337)
T ss_dssp HHHHHHHHHHTCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCSCGGGSCHH---
T ss_pred HHHHHHHHHHhCCCCCeEEEEEEcCCCHHHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEecCChhhCccc---
Confidence 3899999987 5 68999987531 1111111 11123334555554454321 11
Q ss_pred cCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEecCCC
Q 024671 55 DKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGG 92 (264)
Q Consensus 55 ~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGTTG~ 92 (264)
+..+| +|++.|-.....+..+..++.|.+.|+=+.-+
T Consensus 89 ~~gvD-iV~eatg~~~s~e~a~~~l~~Gak~V~iSap~ 125 (337)
T 1rm4_O 89 DMGID-LVIEGTGVFVDRDGAGKHLQAGAKKVLITAPG 125 (337)
T ss_dssp HHTCC-EEEECSSSCCBHHHHHHHHHTTCSEEEESSCC
T ss_pred ccCCC-EEEECCCchhhHHHHHHHHHcCCEEEEECCcc
Confidence 12578 79998877778888888889999988877655
No 147
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=71.91 E-value=12 Score=33.84 Aligned_cols=89 Identities=21% Similarity=0.221 Sum_probs=55.1
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCC-cc--------------cc------ccccccCceeEeecCCchhhHHhhhhcCCC
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTE-EE--------------SG------QKVEVCGKEIQVHGLSDRESVLASVFDKYP 58 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~-~~--------------~g------~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~ 58 (264)
.|+.+.+++. ++++||+++.+... +. .+ ..+.+.+..+.+....|.++. . ..+..+
T Consensus 12 iG~~l~R~l~~~~~veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~i-~-w~~~~v 89 (330)
T 1gad_O 12 IGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPANL-K-WDEVGV 89 (330)
T ss_dssp HHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGGG-C-HHHHTC
T ss_pred HHHHHHHHHHcCCCeEEEEEcCCCChhHHhHhhcccccCCCCCCeEEEcCCEEEECCEEEEEEEcCChhhC-c-cccccC
Confidence 3899999987 68999998765321 10 00 011112223445543343332 0 011257
Q ss_pred CEEEEECCChHHHHHHHHHHHhcCCCeEEecCCC
Q 024671 59 NMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGG 92 (264)
Q Consensus 59 d~VvIDFS~p~~~~~~~~~~~~~g~plViGTTG~ 92 (264)
| +|++-|-.....+..+..++.|.+.|+=+.-+
T Consensus 90 D-vVf~atg~~~s~e~a~~~l~~GakvVdlSa~~ 122 (330)
T 1gad_O 90 D-VVAEATGLFLTDETARKHITAGAKKVVMTGPS 122 (330)
T ss_dssp S-EEEECSSSCCSHHHHTHHHHTTCSEEEESSCC
T ss_pred C-EEEECCCccccHHHHHHHHHCCCEEEEECCCC
Confidence 8 78988877777888888889999988877666
No 148
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=71.84 E-value=5.6 Score=36.56 Aligned_cols=118 Identities=14% Similarity=0.158 Sum_probs=66.7
Q ss_pred ChHHHHHHHHh--CCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHH-----HHH
Q 024671 1 MGKAVIKAADA--AGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAA-----VNG 73 (264)
Q Consensus 1 MG~~i~~~~~~--~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~-----~~~ 73 (264)
||+.=++++.+ ++++|+++.++..... +.. ....|++.+ .|.++.++ .+|.|+| .+|.. -.+
T Consensus 17 ~g~~h~~a~~~~~~~~elvav~~~~~~~a-~~~-a~~~gv~~~--~~~~~l~~-----~~D~v~i--~~p~~~h~~~~~~ 85 (372)
T 4gmf_A 17 FGEMYLNAFMQPPEGLELVGLLAQGSARS-REL-AHAFGIPLY--TSPEQITG-----MPDIACI--VVRSTVAGGAGTQ 85 (372)
T ss_dssp TTHHHHHTTSSCCTTEEEEEEECCSSHHH-HHH-HHHTTCCEE--SSGGGCCS-----CCSEEEE--CCC--CTTSHHHH
T ss_pred HHHHHHHHHHhCCCCeEEEEEECCCHHHH-HHH-HHHhCCCEE--CCHHHHhc-----CCCEEEE--ECCCcccchhHHH
Confidence 46665665543 3699999877544211 111 011245665 35555442 4784333 33333 378
Q ss_pred HHHHHHhcCCCeEEecCCCCHHHHHH---HHHccCCcEEEccchhH--HHHHHHHHHHHHHH
Q 024671 74 NAELYSKVGVPFVMGTTGGDRVRLHE---TIENSNVYAVISPQMGK--QVVAFLAAMEIMAE 130 (264)
Q Consensus 74 ~~~~~~~~g~plViGTTG~~~~~~~~---l~~~~~~~~v~s~NfSl--Gv~ll~~~~~~aa~ 130 (264)
....|++.|+++++=-. ++.++.++ ++++.++.+.+..|+-. -+.-|.+.++++.+
T Consensus 86 ~a~~al~aGkhVl~EKP-l~~~ea~~l~~~A~~~g~~~~v~~~yr~~p~vr~~i~~~~~l~~ 146 (372)
T 4gmf_A 86 LARHFLARGVHVIQEHP-LHPDDISSLQTLAQEQGCCYWINTFYPHTRAGRTWLRDAQQLRR 146 (372)
T ss_dssp HHHHHHHTTCEEEEESC-CCHHHHHHHHHHHHHHTCCEEEECSGGGSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcEEEecC-CCHHHHHHHHHHHHHcCCEEEEcCcccCCHHHHHHHHHHHHHHh
Confidence 89999999999988776 77665444 45556677777777543 23334444444433
No 149
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=71.75 E-value=10 Score=27.77 Aligned_cols=73 Identities=14% Similarity=0.087 Sum_probs=38.1
Q ss_pred CCchhhHHhhhhcCCCCEEEEECCCh-----H-HHHHHHHHHHh--cCCCeEEecCCCCHHHHHHHHHccCCcEEEccch
Q 024671 43 LSDRESVLASVFDKYPNMIVVDYTVP-----A-AVNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQM 114 (264)
Q Consensus 43 ~~dl~~~l~~~~~~~~d~VvIDFS~p-----~-~~~~~~~~~~~--~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~Nf 114 (264)
..+.++++..+....+|.|++|...| . .-.+.++...+ ..+|+|+=|.-.+.+...... ..+.--++.-.+
T Consensus 33 ~~~~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~-~~g~~~~l~kp~ 111 (140)
T 2qr3_A 33 LSSPVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAYADIDLAVRGI-KEGASDFVVKPW 111 (140)
T ss_dssp ECCHHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEGGGHHHHHHHH-HTTCCEEEEESC
T ss_pred eCCHHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECCCCHHHHHHHH-HcCchheeeCCC
Confidence 34556666666666789889999887 2 23344444444 356766655433333333332 334333333344
Q ss_pred hH
Q 024671 115 GK 116 (264)
Q Consensus 115 Sl 116 (264)
+.
T Consensus 112 ~~ 113 (140)
T 2qr3_A 112 DN 113 (140)
T ss_dssp CH
T ss_pred CH
Confidence 44
No 150
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=71.50 E-value=49 Score=32.36 Aligned_cols=78 Identities=13% Similarity=0.195 Sum_probs=52.3
Q ss_pred hHHhhhhcCCCCEEEEECCChHH---HHHHHHHHHhcC--CCeEEecCCCCHHHHH-HHHHccCCcEEEccchhHHHHHH
Q 024671 48 SVLASVFDKYPNMIVVDYTVPAA---VNGNAELYSKVG--VPFVMGTTGGDRVRLH-ETIENSNVYAVISPQMGKQVVAF 121 (264)
Q Consensus 48 ~~l~~~~~~~~d~VvIDFS~p~~---~~~~~~~~~~~g--~plViGTTG~~~~~~~-~l~~~~~~~~v~s~NfSlGv~ll 121 (264)
+.++.+....+|.|.+=++.... +.+.++.+.+.| +|+++|=..++.+.-+ ++.....-+.+|++|.+-++.+.
T Consensus 140 ~iv~aa~~~~~diVgLS~l~t~~~~~m~~~i~~Lr~~g~~i~ViVGGa~~~~~~a~~~i~p~~~GAD~ya~DA~~Av~~a 219 (579)
T 3bul_A 140 KILRTAKEVNADLIGLSGLITPSLDEMVNVAKEMERQGFTIPLLIGGATTSKAHTAVKIEQNYSGPTVYVQNASRTVGVV 219 (579)
T ss_dssp HHHHHHHHHTCSEEEEECCSTHHHHHHHHHHHHHHHTTCCSCEEEESTTCCHHHHHHHTGGGCSSCEEECCSHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEecCCCCHHHHHHHHHHHHHcCCCCeEEEEccccchhhhhhhhhhcccCCeEEECCHHHHHHHH
Confidence 33444445679977777766543 445666666655 8999998888876432 33222224679999999999888
Q ss_pred HHHH
Q 024671 122 LAAM 125 (264)
Q Consensus 122 ~~~~ 125 (264)
.+++
T Consensus 220 ~~l~ 223 (579)
T 3bul_A 220 AALL 223 (579)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 8776
No 151
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=71.49 E-value=28 Score=29.52 Aligned_cols=41 Identities=5% Similarity=0.074 Sum_probs=30.9
Q ss_pred HhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEecC
Q 024671 50 LASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT 90 (264)
Q Consensus 50 l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGTT 90 (264)
+..+....+|.+++.-+.++...+.++.+.+.|+|+|.--+
T Consensus 51 i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~ 91 (313)
T 3m9w_A 51 IENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDR 91 (313)
T ss_dssp HHHHHHTTCSEEEEECSSTTSCHHHHHHHHTTTCEEEEESS
T ss_pred HHHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCeEEEECC
Confidence 34444457897777777787778889999999999987543
No 152
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=71.35 E-value=10 Score=27.68 Aligned_cols=73 Identities=16% Similarity=0.189 Sum_probs=38.4
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHhc--CCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQ 117 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~~--g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlG 117 (264)
.+.++++..+....||.|++|...|. .-.+.++...+. .+|+|+=|.--+........ ..+.--++.-.++..
T Consensus 34 ~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~-~~g~~~~l~KP~~~~ 109 (136)
T 1mvo_A 34 SDGEEALKKAETEKPDLIVLDVMLPKLDGIEVCKQLRQQKLMFPILMLTAKDEEFDKVLGL-ELGADDYMTKPFSPR 109 (136)
T ss_dssp SSHHHHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECTTCCCCHHHHH-HTTCCEEEESSCCHH
T ss_pred cCHHHHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH-hCCCCEEEECCCCHH
Confidence 34455555555557898899999885 234555555443 46666655433332222222 334333444445543
No 153
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=70.56 E-value=15 Score=33.33 Aligned_cols=83 Identities=16% Similarity=0.168 Sum_probs=49.6
Q ss_pred ChHHHHHHHH-h--CCCeEEEEEcCC-----------Ccccccc----------ccccCceeEeecCCchhhHHhhhhcC
Q 024671 1 MGKAVIKAAD-A--AGLELVPVSFGT-----------EEESGQK----------VEVCGKEIQVHGLSDRESVLASVFDK 56 (264)
Q Consensus 1 MG~~i~~~~~-~--~~~eLv~~~~~~-----------~~~~g~~----------~~~~~~~i~i~~~~dl~~~l~~~~~~ 56 (264)
+||.+.+++. + +++++++..+.. ....|+- +.+.+..+.+....|+++. . ..+.
T Consensus 13 IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~l-~-w~~~ 90 (339)
T 3b1j_A 13 IGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRNPLNL-P-WKEW 90 (339)
T ss_dssp HHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSCGGGS-C-TTTT
T ss_pred HHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEEcCCeeeecCceEEEEecCChHHC-c-cccc
Confidence 4899999987 5 789999865421 1111111 1112334555544454332 1 1112
Q ss_pred CCCEEEEECCChHHHHHHHHHHHhcCCCeE
Q 024671 57 YPNMIVVDYTVPAAVNGNAELYSKVGVPFV 86 (264)
Q Consensus 57 ~~d~VvIDFS~p~~~~~~~~~~~~~g~plV 86 (264)
.+| ++++.|-.....+.....++.|.+-|
T Consensus 91 ~vD-vV~e~tg~~~s~e~a~~~l~~GakkV 119 (339)
T 3b1j_A 91 DID-LVIESTGVFVTAEGASKHIQAGAKKV 119 (339)
T ss_dssp TCC-EEEECSSSCCBHHHHHHHHHTTCSEE
T ss_pred CCC-EEEECCCccccHHHHHHHHHcCCcEE
Confidence 578 89998877777888888888898833
No 154
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=70.49 E-value=29 Score=26.09 Aligned_cols=116 Identities=13% Similarity=0.031 Sum_probs=59.1
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCce-eEeecCCchhhHHhhhhcCCCCEEEEECCC-hHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKE-IQVHGLSDRESVLASVFDKYPNMIVVDYTV-PAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~-i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~-p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|++++. ++..+... +.+.-.+.. +..+ ..+ ++.+.......+| ++|-.+. .+.-......+
T Consensus 17 iG~~la~~L~~~g~~V~~-id~~~~~~-~~~~~~~~~~~~gd-~~~-~~~l~~~~~~~~d-~vi~~~~~~~~n~~~~~~a 91 (141)
T 3llv_A 17 AGVGLVRELTAAGKKVLA-VDKSKEKI-ELLEDEGFDAVIAD-PTD-ESFYRSLDLEGVS-AVLITGSDDEFNLKILKAL 91 (141)
T ss_dssp HHHHHHHHHHHTTCCEEE-EESCHHHH-HHHHHTTCEEEECC-TTC-HHHHHHSCCTTCS-EEEECCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEE-EECCHHHH-HHHHHCCCcEEECC-CCC-HHHHHhCCcccCC-EEEEecCCHHHHHHHHHHH
Confidence 588899888888998885 45433211 001000111 1111 122 2233333223578 4555443 44444455556
Q ss_pred HhcCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHHHHHHHH
Q 024671 79 SKVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLA 123 (264)
Q Consensus 79 ~~~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlGv~ll~~ 123 (264)
.+.+.+.|+... -+++..+.+. ..++-.+++|....+-.+...
T Consensus 92 ~~~~~~~iia~~-~~~~~~~~l~-~~G~~~vi~p~~~~~~~l~~~ 134 (141)
T 3llv_A 92 RSVSDVYAIVRV-SSPKKKEEFE-EAGANLVVLVADAVKQAFMDK 134 (141)
T ss_dssp HHHCCCCEEEEE-SCGGGHHHHH-HTTCSEEEEHHHHHHHHHHHH
T ss_pred HHhCCceEEEEE-cChhHHHHHH-HcCCCEEECHHHHHHHHHHHH
Confidence 666655555443 2233344443 346777899988887654443
No 155
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=70.22 E-value=14 Score=27.13 Aligned_cols=74 Identities=11% Similarity=0.091 Sum_probs=41.3
Q ss_pred CCchhhHHhhhhc------CCCCEEEEECCChH-HHHHHHHHHHhc----CCCeEEecCCCCHHHHHHHHHccCCcEEEc
Q 024671 43 LSDRESVLASVFD------KYPNMIVVDYTVPA-AVNGNAELYSKV----GVPFVMGTTGGDRVRLHETIENSNVYAVIS 111 (264)
Q Consensus 43 ~~dl~~~l~~~~~------~~~d~VvIDFS~p~-~~~~~~~~~~~~----g~plViGTTG~~~~~~~~l~~~~~~~~v~s 111 (264)
..+.++++..+.. ..||.|++|...|. .-.+.++...+. .+|+|+-|...+.+..... ...+.--++.
T Consensus 39 ~~~~~~a~~~l~~~~~~~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~-~~~g~~~~l~ 117 (143)
T 2qvg_A 39 AKSGNQALDMLYGRNKENKIHPKLILLDINIPKMNGIEFLKELRDDSSFTDIEVFVLTAAYTSKDKLAF-ESLNIRGHLI 117 (143)
T ss_dssp ESSHHHHHHHHHTCTTCCCCCCSEEEEETTCTTSCHHHHHHHHTTSGGGTTCEEEEEESCCCHHHHHHH-TTTTCCEEEE
T ss_pred ECCHHHHHHHHHhcccccCCCCCEEEEecCCCCCCHHHHHHHHHcCccccCCcEEEEeCCCCHHHHHHH-HhcCCCeEEE
Confidence 3455666665554 56898899999885 234555555443 4666666655554443333 2344433444
Q ss_pred cchhHH
Q 024671 112 PQMGKQ 117 (264)
Q Consensus 112 ~NfSlG 117 (264)
-.++..
T Consensus 118 kP~~~~ 123 (143)
T 2qvg_A 118 KPLDYG 123 (143)
T ss_dssp SSCCHH
T ss_pred CCCCHH
Confidence 445543
No 156
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=70.09 E-value=29 Score=25.89 Aligned_cols=74 Identities=19% Similarity=0.230 Sum_probs=41.8
Q ss_pred CCchhhHHhhhhc-------CCCCEEEEECCChH-HHHHHHHHHHhc----CCCeEEecCCCCHHHHHHHHHccCCcEEE
Q 024671 43 LSDRESVLASVFD-------KYPNMIVVDYTVPA-AVNGNAELYSKV----GVPFVMGTTGGDRVRLHETIENSNVYAVI 110 (264)
Q Consensus 43 ~~dl~~~l~~~~~-------~~~d~VvIDFS~p~-~~~~~~~~~~~~----g~plViGTTG~~~~~~~~l~~~~~~~~v~ 110 (264)
..+.++++..+.. ..+|.|++|...|. .-.+.++...+. .+|+|+-|+..+.+......+ .+.--++
T Consensus 40 ~~~~~~al~~l~~~~~~~~~~~~dlillD~~lp~~~g~~l~~~l~~~~~~~~~piiils~~~~~~~~~~~~~-~ga~~~l 118 (149)
T 1i3c_A 40 LRDGLAAMAFLQQQGEYENSPRPNLILLDLNLPKKDGREVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASYE-LHVNCYL 118 (149)
T ss_dssp ECSHHHHHHHHTTCGGGTTCCCCSEEEECSCCSSSCHHHHHHHHHHCTTTTTSCEEEEESCCCHHHHHHHHH-TTCSEEE
T ss_pred eCCHHHHHHHHHhccccccCCCCCEEEEeCCCCCCcHHHHHHHHHhCcCcCCCeEEEEECCCChHHHHHHHH-cCCcEEE
Confidence 3455556655442 36898899999885 234555555553 578888776655555444433 3433333
Q ss_pred ccchhHH
Q 024671 111 SPQMGKQ 117 (264)
Q Consensus 111 s~NfSlG 117 (264)
.-.++..
T Consensus 119 ~KP~~~~ 125 (149)
T 1i3c_A 119 TKSRNLK 125 (149)
T ss_dssp ECCSSHH
T ss_pred ECCCCHH
Confidence 3344443
No 157
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=70.02 E-value=1.8 Score=37.58 Aligned_cols=99 Identities=13% Similarity=0.111 Sum_probs=56.2
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
||+.+++.+.+.|+++. ++++.+... +.+ ...++.+. +..+++ ..+| +||-...|..+.+.++....
T Consensus 23 mG~~la~~l~~~g~~V~-~~~r~~~~~-~~~--~~~g~~~~---~~~~~~-----~~aD-vVi~av~~~~~~~v~~~l~~ 89 (286)
T 3c24_A 23 MGARITRKIHDSAHHLA-AIEIAPEGR-DRL--QGMGIPLT---DGDGWI-----DEAD-VVVLALPDNIIEKVAEDIVP 89 (286)
T ss_dssp HHHHHHHHHHHSSSEEE-EECCSHHHH-HHH--HHTTCCCC---CSSGGG-----GTCS-EEEECSCHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHhCCCEEE-EEECCHHHH-HHH--HhcCCCcC---CHHHHh-----cCCC-EEEEcCCchHHHHHHHHHHH
Confidence 78999988888889887 345432111 011 00122221 222333 2578 78988888888888776544
Q ss_pred ---cCCCeEEecCCCCHHHHHHHHHccCCcEE-Eccch
Q 024671 81 ---VGVPFVMGTTGGDRVRLHETIENSNVYAV-ISPQM 114 (264)
Q Consensus 81 ---~g~plViGTTG~~~~~~~~l~~~~~~~~v-~s~Nf 114 (264)
.+..+|..+||.+.+.++.+ ..+..++ ..||+
T Consensus 90 ~l~~~~ivv~~s~~~~~~~l~~~--~~~~~~v~~~P~~ 125 (286)
T 3c24_A 90 RVRPGTIVLILDAAAPYAGVMPE--RADITYFIGHPCH 125 (286)
T ss_dssp GSCTTCEEEESCSHHHHHTCSCC--CTTSEEEEEEECC
T ss_pred hCCCCCEEEECCCCchhHHHHhh--hCCCeEEecCCCC
Confidence 35556668888744333321 1234555 56665
No 158
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=69.94 E-value=20 Score=26.15 Aligned_cols=73 Identities=12% Similarity=0.004 Sum_probs=40.6
Q ss_pred CCchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHhc--CCCeEEecCCCCH-HHHHHHHHccCCcEEEccchhHH
Q 024671 43 LSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV--GVPFVMGTTGGDR-VRLHETIENSNVYAVISPQMGKQ 117 (264)
Q Consensus 43 ~~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~--g~plViGTTG~~~-~~~~~l~~~~~~~~v~s~NfSlG 117 (264)
..+.++++..+....||.|++|+..|.. -.+.++...+. .+| |+-.|+... +...... ..+.--++.-.++..
T Consensus 37 ~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~-ii~~s~~~~~~~~~~~~-~~g~~~~l~kP~~~~ 113 (137)
T 3hdg_A 37 AGDGEEGERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPY-VIVISAFSEMKYFIKAI-ELGVHLFLPKPIEPG 113 (137)
T ss_dssp ESSHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCE-EEECCCCCCHHHHHHHH-HHCCSEECCSSCCHH
T ss_pred ECCHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCc-EEEEecCcChHHHHHHH-hCCcceeEcCCCCHH
Confidence 3466666666666679988999998752 34455554443 344 555566544 3333332 344433444445443
No 159
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=69.58 E-value=46 Score=27.68 Aligned_cols=41 Identities=12% Similarity=0.109 Sum_probs=29.6
Q ss_pred HhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEecC
Q 024671 50 LASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT 90 (264)
Q Consensus 50 l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGTT 90 (264)
+..+....+|.+++--..++...+.++.+.+.|+|+|.--+
T Consensus 57 ~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~~~ 97 (293)
T 3l6u_A 57 ILEFVHLKVDAIFITTLDDVYIGSAIEEAKKAGIPVFAIDR 97 (293)
T ss_dssp HHHHHHTTCSEEEEECSCTTTTHHHHHHHHHTTCCEEEESS
T ss_pred HHHHHHcCCCEEEEecCChHHHHHHHHHHHHcCCCEEEecC
Confidence 44444457896677666677677888899999999987543
No 160
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=68.98 E-value=11 Score=30.39 Aligned_cols=73 Identities=12% Similarity=0.084 Sum_probs=40.9
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHhc--CCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQ 117 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~~--g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlG 117 (264)
.+.++++..+....||.|++|...|. .-.+.++...+. .+|+|+=| +.+..+...-+-..+.--++.-.++..
T Consensus 33 ~~~~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ls-~~~~~~~~~~~~~~ga~~~l~Kp~~~~ 108 (225)
T 1kgs_A 33 YDGEEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLT-ALSDVEYRVKGLNMGADDYLPKPFDLR 108 (225)
T ss_dssp SSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEE-SSCHHHHHHHTCCCCCSEEEESSCCHH
T ss_pred CCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEe-CCCCHHHHHHHHhCCccEEEeCCCCHH
Confidence 34455555555567998899999885 234555555553 56766654 555433222222344433555556554
No 161
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=68.78 E-value=32 Score=28.69 Aligned_cols=79 Identities=11% Similarity=0.103 Sum_probs=46.8
Q ss_pred eEeecCCchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHhc-CCCeEEecCCCCHHHHHHHHHccCCcEEEccchh
Q 024671 38 IQVHGLSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV-GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMG 115 (264)
Q Consensus 38 i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~-g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfS 115 (264)
..+....+.++++..+....||.|++|...|.. -.+.++...+. .+|+|+-|.--+.+......+ .+.--++.-.++
T Consensus 62 ~~v~~~~~~~~al~~~~~~~~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~lt~~~~~~~~~~a~~-~Ga~~yl~Kp~~ 140 (249)
T 3q9s_A 62 YVVDHADSAMNGLIKAREDHPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTARDTVEEKVRLLG-LGADDYLIKPFH 140 (249)
T ss_dssp CEEEEESSHHHHHHHHHHSCCSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEEESCCSHHHHHHHHH-HTCSEEEESSCC
T ss_pred CEEEEeCCHHHHHHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEEECCCCHHHHHHHHH-CCCcEEEECCCC
Confidence 344445567777777666789988999999973 24445544443 577776655444444433333 344445555566
Q ss_pred HH
Q 024671 116 KQ 117 (264)
Q Consensus 116 lG 117 (264)
..
T Consensus 141 ~~ 142 (249)
T 3q9s_A 141 PD 142 (249)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 162
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=68.59 E-value=33 Score=25.29 Aligned_cols=116 Identities=14% Similarity=0.085 Sum_probs=60.5
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeE-ee-cCCchhhHHhhhhcCCCCEEEEECCCh--HHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQ-VH-GLSDRESVLASVFDKYPNMIVVDYTVP--AAVNGNAE 76 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~-i~-~~~dl~~~l~~~~~~~~d~VvIDFS~p--~~~~~~~~ 76 (264)
||+.+++.+.+.|++++. ++..+.... .+ ...+.. +. ...+. +.+.+.....+| ++|..+.. +.......
T Consensus 17 iG~~~a~~l~~~g~~v~~-~d~~~~~~~-~~--~~~~~~~~~~d~~~~-~~l~~~~~~~~d-~vi~~~~~~~~~~~~~~~ 90 (144)
T 2hmt_A 17 FGGSIVKELHRMGHEVLA-VDINEEKVN-AY--ASYATHAVIANATEE-NELLSLGIRNFE-YVIVAIGANIQASTLTTL 90 (144)
T ss_dssp HHHHHHHHHHHTTCCCEE-EESCHHHHH-TT--TTTCSEEEECCTTCH-HHHHTTTGGGCS-EEEECCCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEE-EeCCHHHHH-HH--HHhCCEEEEeCCCCH-HHHHhcCCCCCC-EEEECCCCchHHHHHHHH
Confidence 588899888877888764 443321100 00 001111 11 11222 223332123578 67777753 44455666
Q ss_pred HHHhcCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHHHHHHHHH
Q 024671 77 LYSKVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLAA 124 (264)
Q Consensus 77 ~~~~~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlGv~ll~~~ 124 (264)
.+.+.+.+-|+..+ -+....+.+.+ .+...+++|....+-.+...+
T Consensus 91 ~~~~~~~~~ii~~~-~~~~~~~~l~~-~g~~~vi~p~~~~~~~l~~~~ 136 (144)
T 2hmt_A 91 LLKELDIPNIWVKA-QNYYHHKVLEK-IGADRIIHPEKDMGVKIAQSL 136 (144)
T ss_dssp HHHHTTCSEEEEEC-CSHHHHHHHHH-HTCSEEECHHHHHHHHHHHHH
T ss_pred HHHHcCCCeEEEEe-CCHHHHHHHHH-cCCCEEECccHHHHHHHHHHH
Confidence 77777776555433 12333333433 567788899888876555443
No 163
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=68.23 E-value=9.2 Score=28.42 Aligned_cols=52 Identities=19% Similarity=0.228 Sum_probs=32.5
Q ss_pred CCchhhHHhhhhc-CCCCEEEEECCChH--HHHHHHHHHHh-cCCCeEEecCCCCH
Q 024671 43 LSDRESVLASVFD-KYPNMIVVDYTVPA--AVNGNAELYSK-VGVPFVMGTTGGDR 94 (264)
Q Consensus 43 ~~dl~~~l~~~~~-~~~d~VvIDFS~p~--~~~~~~~~~~~-~g~plViGTTG~~~ 94 (264)
..+.++++..+.. ..||.|++|...|+ .-.+.++...+ ..+|+|+-|.-.+.
T Consensus 35 ~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~~~~~ 90 (140)
T 3h5i_A 35 ALTGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTAHTEP 90 (140)
T ss_dssp ESSHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEESSSSC
T ss_pred ecChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEECCCCH
Confidence 3455666666654 57898899999874 34445554444 46777766654443
No 164
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=68.20 E-value=12 Score=27.34 Aligned_cols=73 Identities=5% Similarity=0.020 Sum_probs=38.8
Q ss_pred CchhhHHhhhhcCC-CCEEEEECCChHH-HHHHHHHHHhc---CCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHH
Q 024671 44 SDRESVLASVFDKY-PNMIVVDYTVPAA-VNGNAELYSKV---GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQ 117 (264)
Q Consensus 44 ~dl~~~l~~~~~~~-~d~VvIDFS~p~~-~~~~~~~~~~~---g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlG 117 (264)
.+.++++..+.... +|.|++|...|.. -.+.++...+. .+|+|+-|.--+.+...... ..+.--++.-.++..
T Consensus 38 ~~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ii~~s~~~~~~~~~~~~-~~g~~~~l~KP~~~~ 115 (136)
T 3hdv_A 38 DGAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRASERAALSIIVVSGDTDVEEAVDVM-HLGVVDFLLKPVDLG 115 (136)
T ss_dssp SSHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTSTTTTCEEEEEESSCCHHHHHHHH-HTTCSEEEESSCCHH
T ss_pred CCHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhcCCCCCCEEEEeCCCChHHHHHHH-hCCcceEEeCCCCHH
Confidence 44555555544445 8888999998753 34555555554 34555544434444443333 344433444445553
No 165
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=68.12 E-value=24 Score=33.08 Aligned_cols=112 Identities=10% Similarity=0.086 Sum_probs=58.0
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccc-cccCc-eeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKV-EVCGK-EIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~-~~~~~-~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
||+.+++.+.+.|.+++. .++......... ...+. .+.++. .|.+. +.++. ..+| +||..+.+.........|
T Consensus 14 iG~~ia~~L~~~G~~V~v-~~R~~~~a~~la~~~~~~~~~~~Dv-~d~~~-l~~~l-~~~D-vVIn~a~~~~~~~i~~a~ 88 (450)
T 1ff9_A 14 VTRPTLDVLTDSGIKVTV-ACRTLESAKKLSAGVQHSTPISLDV-NDDAA-LDAEV-AKHD-LVISLIPYTFHATVIKSA 88 (450)
T ss_dssp THHHHHHHHHTTTCEEEE-EESSHHHHHHTTTTCTTEEEEECCT-TCHHH-HHHHH-TTSS-EEEECCC--CHHHHHHHH
T ss_pred HHHHHHHHHHhCcCEEEE-EECCHHHHHHHHHhcCCceEEEeec-CCHHH-HHHHH-cCCc-EEEECCccccchHHHHHH
Confidence 699999988888888653 443321110000 01111 122221 12221 22222 2578 789888654444566778
Q ss_pred HhcCCCeEEecCCCCHH--HHHHHHHccCCcEEEccchhHHH
Q 024671 79 SKVGVPFVMGTTGGDRV--RLHETIENSNVYAVISPQMGKQV 118 (264)
Q Consensus 79 ~~~g~plViGTTG~~~~--~~~~l~~~~~~~~v~s~NfSlGv 118 (264)
.+.|++++. ++-+.+. .+.+.++++++.++...+|.-|.
T Consensus 89 l~~g~~vvd-~~~~~~~~~~l~~aA~~aGv~~i~g~g~~pg~ 129 (450)
T 1ff9_A 89 IRQKKHVVT-TSYVSPAMMELDQAAKDAGITVMNEIGLDPGI 129 (450)
T ss_dssp HHHTCEEEE-SSCCCHHHHHTHHHHHHTTCEEECSCBBTTBH
T ss_pred HhCCCeEEE-eecccHHHHHHHHHHHHCCCeEEeCCCCcCch
Confidence 888877654 4434443 34445556677777777774453
No 166
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=67.90 E-value=18 Score=26.39 Aligned_cols=72 Identities=13% Similarity=0.129 Sum_probs=38.9
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHhc--CCCeEEecCCCCHHHHHHHHHccCCcEEEccchhH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~~--g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSl 116 (264)
.+.++++..+....||.|++|+..|. .-.+.++...+. .+|+|+=|.--+.+......+ .+.--++.-.++.
T Consensus 36 ~~~~~al~~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~~~~~~~~~~~~-~ga~~~l~Kp~~~ 110 (133)
T 3b2n_A 36 DNGLDAMKLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTFKRPGYFEKAVV-NDVDAYVLKERSI 110 (133)
T ss_dssp SCHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHH-TTCSEEEETTSCH
T ss_pred CCHHHHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecCCCHHHHHHHHH-cCCcEEEECCCCH
Confidence 34555565555557898899999885 234555555443 466666554344444433333 4433333334444
No 167
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=67.65 E-value=30 Score=24.48 Aligned_cols=72 Identities=11% Similarity=0.124 Sum_probs=36.5
Q ss_pred chhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHh-cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHH
Q 024671 45 DRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK-VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQ 117 (264)
Q Consensus 45 dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~-~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlG 117 (264)
+.++++..+....||.|++|...|.. -.+.++...+ ..+|+|+=|.--+.+......+ .+.--++.-.++..
T Consensus 34 ~~~~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~~~~~~~~~~-~ga~~~l~Kp~~~~ 107 (122)
T 1zgz_A 34 SGAGLREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLE-MGADDYVTKPLELR 107 (122)
T ss_dssp SHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESSCCHHHHHHHHH-HTCSEEEESSCCHH
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECCCChhhHHHHHH-hCHHHHccCCCCHH
Confidence 33444544445578988999998852 2344444444 3456555444334433333322 34333344445543
No 168
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=67.53 E-value=7.4 Score=28.06 Aligned_cols=49 Identities=18% Similarity=0.372 Sum_probs=29.8
Q ss_pred chhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHhc----CCCeEEecCCCCH
Q 024671 45 DRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSKV----GVPFVMGTTGGDR 94 (264)
Q Consensus 45 dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~~----g~plViGTTG~~~ 94 (264)
+.++++..+....||.|++|...|. .-.+.++...+. .+|+|+-| +...
T Consensus 34 ~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s-~~~~ 87 (127)
T 2jba_A 34 DYDSAVNQLNEPWPDLILLAWMLPGGSGIQFIKHLRRESMTRDIPVVMLT-ARGE 87 (127)
T ss_dssp SHHHHHTTCSSSCCSEEEEESEETTEEHHHHHHHHHTSTTTTTSCEEEEE-ETTH
T ss_pred CHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHhCcccCCCCEEEEe-CCCC
Confidence 4445555555557898899999885 234555555543 56766655 4443
No 169
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=67.41 E-value=3.8 Score=31.82 Aligned_cols=52 Identities=13% Similarity=0.258 Sum_probs=39.2
Q ss_pred EEEEECCC---hHHHHHHHHHHHhcCCCeEEecCCCCHHHHHHHHHccCCcEEEcc
Q 024671 60 MIVVDYTV---PAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSNVYAVISP 112 (264)
Q Consensus 60 ~VvIDFS~---p~~~~~~~~~~~~~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~ 112 (264)
.||||++. +.-+...+..|.++|+.+ +|-+|.++++.+..+.+++.|++-+.
T Consensus 49 PVVlDl~~l~~~~dl~~L~~~l~~~gl~~-vGV~g~~~~~~~~~a~~~GLp~l~~~ 103 (120)
T 3ghf_A 49 PVVINVSGLESPVNWPELHKIVTSTGLRI-IGVSGCKDASLKVEIDRMGLPLLTEG 103 (120)
T ss_dssp EEEEEEEECCSSCCHHHHHHHHHTTTCEE-EEEESCCCHHHHHHHHHHTCCEECCC
T ss_pred cEEEEccccCChHHHHHHHHHHHHcCCEE-EEEeCCCcHHHHHHHHHCCCCccCCC
Confidence 58999884 345777888888888865 78888877666777777888887544
No 170
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=67.02 E-value=38 Score=25.50 Aligned_cols=72 Identities=10% Similarity=0.115 Sum_probs=39.7
Q ss_pred CchhhHHhhhhcC--CCCEEEEECCChHH-HHHHHHHHHh--cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhH
Q 024671 44 SDRESVLASVFDK--YPNMIVVDYTVPAA-VNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 44 ~dl~~~l~~~~~~--~~d~VvIDFS~p~~-~~~~~~~~~~--~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSl 116 (264)
.+.++++..+... .+|.|++|...|.. -.+.++...+ ..+|+|+-|.--+.+......+ .+.--++.-.++.
T Consensus 68 ~~~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~~-~g~~~~l~KP~~~ 144 (157)
T 3hzh_A 68 ADGEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISALGKEQLVKDCLI-KGAKTFIVKPLDR 144 (157)
T ss_dssp SSHHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESCCCHHHHHHHHH-TTCSEEEESSCCH
T ss_pred CCHHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEeccCcHHHHHHHHH-cCCCEEEeCCCCH
Confidence 4556666665555 68988999987752 2344444443 3577766655444544444333 3433344444444
No 171
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=66.92 E-value=7.1 Score=28.86 Aligned_cols=55 Identities=11% Similarity=0.188 Sum_probs=34.4
Q ss_pred EeecCCchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHh----cCCCeEEecCCCC
Q 024671 39 QVHGLSDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSK----VGVPFVMGTTGGD 93 (264)
Q Consensus 39 ~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~----~g~plViGTTG~~ 93 (264)
.+....+.++++..+....+|.|++|...|. .-.+.++...+ ..+|+|+-|...+
T Consensus 33 ~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~ 92 (142)
T 3cg4_A 33 HIISADSGGQCIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVMLTAKNA 92 (142)
T ss_dssp EEEEESSHHHHHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEEEEECTTC
T ss_pred EEEEeCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEEEEECCCC
Confidence 3334456666777666667898899999875 33456666655 2456665554333
No 172
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=66.71 E-value=19 Score=29.14 Aligned_cols=19 Identities=32% Similarity=0.550 Sum_probs=15.7
Q ss_pred ChHHHHHHHHhCCCeEEEE
Q 024671 1 MGKAVIKAADAAGLELVPV 19 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~ 19 (264)
.|+.+++.+.+.|+++++.
T Consensus 16 iG~~l~~~L~~~g~~V~~~ 34 (227)
T 3dhn_A 16 VGSALLNEALNRGFEVTAV 34 (227)
T ss_dssp HHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEE
Confidence 3889999998889998864
No 173
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=66.50 E-value=31 Score=24.22 Aligned_cols=71 Identities=13% Similarity=0.199 Sum_probs=36.7
Q ss_pred chhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHh-cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhH
Q 024671 45 DRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSK-VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 45 dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~-~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSl 116 (264)
+..+++..+....||.|++|...|. .-.+.++...+ ..+|+|+=|+--+.+......+ .+.--++.-.++.
T Consensus 33 ~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~~~~~~~~~~~-~g~~~~l~Kp~~~ 105 (121)
T 1zh2_A 33 TLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSEESDKIAALD-AGADDYLSKPFGI 105 (121)
T ss_dssp SHHHHHHHHHHHCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEESCCSHHHHHHHHH-HTCSEEEESSCCH
T ss_pred CHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHhCCCCcEEEEECCCCHHHHHHHHh-cCCCeEEeCCcCH
Confidence 3344444444456898899998875 23344444443 3567776655444444333333 3433333333443
No 174
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=66.18 E-value=21 Score=29.56 Aligned_cols=79 Identities=10% Similarity=0.067 Sum_probs=46.2
Q ss_pred eEeecCCchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHhc--CCCeEEecCCCCHHHHHHHHHccCCcEEEccch
Q 024671 38 IQVHGLSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISPQM 114 (264)
Q Consensus 38 i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~--g~plViGTTG~~~~~~~~l~~~~~~~~v~s~Nf 114 (264)
+.+....+.++++..+....||.|++|...|.. -.+.++...+. .+|+|+=|.--+.+..... -..+.--++.-.|
T Consensus 48 ~~v~~~~~~~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~-~~~Ga~~yl~Kp~ 126 (250)
T 3r0j_A 48 FEVYTATNGAQALDRARETRPDAVILDVXMPGMDGFGVLRRLRADGIDAPALFLTARDSLQDKIAG-LTLGGDDYVTKPF 126 (250)
T ss_dssp CEEEEESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEECSTTHHHHHHH-HTSTTCEEEESSC
T ss_pred CEEEEECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHH-HHcCCcEEEeCCC
Confidence 444445677777776666679988999998862 34555555554 4677765543344333332 2345444444555
Q ss_pred hHH
Q 024671 115 GKQ 117 (264)
Q Consensus 115 SlG 117 (264)
+..
T Consensus 127 ~~~ 129 (250)
T 3r0j_A 127 SLE 129 (250)
T ss_dssp CHH
T ss_pred CHH
Confidence 554
No 175
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=66.06 E-value=41 Score=28.20 Aligned_cols=70 Identities=10% Similarity=0.088 Sum_probs=44.8
Q ss_pred hHHhhhhcCCCCEEEE--ECCChH---HHHHHHHHHHhcC----CCeEEecCCCCHHHHHHHHHccCCcE-EEccchhHH
Q 024671 48 SVLASVFDKYPNMIVV--DYTVPA---AVNGNAELYSKVG----VPFVMGTTGGDRVRLHETIENSNVYA-VISPQMGKQ 117 (264)
Q Consensus 48 ~~l~~~~~~~~d~VvI--DFS~p~---~~~~~~~~~~~~g----~plViGTTG~~~~~~~~l~~~~~~~~-v~s~NfSlG 117 (264)
+.++.+.+..||.|.+ =.+... .+.+.++.+.+.+ +|+++|=..++++- ++ +++. .|++|-+-+
T Consensus 134 ~iv~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~~~~~~~~v~v~vGG~~~~~~~----a~--~iGad~~~~dA~~a 207 (215)
T 3ezx_A 134 NVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLNEEKLRDSVKCMFGGAPVSDKW----IE--EIGADATAENAAEA 207 (215)
T ss_dssp HHHHHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHHHTTCGGGSEEEEESSSCCHHH----HH--HHTCCBCCSSHHHH
T ss_pred HHHHHHHHcCCCEEEEEchhcccCcHHHHHHHHHHHHHcCCCCCCEEEEECCCCCHHH----HH--HhCCeEEECCHHHH
Confidence 3344445567896677 444432 3567777777764 68899988888642 22 2344 889999888
Q ss_pred HHHHHH
Q 024671 118 VVAFLA 123 (264)
Q Consensus 118 v~ll~~ 123 (264)
+.+..+
T Consensus 208 v~~a~~ 213 (215)
T 3ezx_A 208 AKVALE 213 (215)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 865544
No 176
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=65.85 E-value=15 Score=29.70 Aligned_cols=19 Identities=16% Similarity=0.394 Sum_probs=15.9
Q ss_pred ChHHHHHHHHhCCCeEEEE
Q 024671 1 MGKAVIKAADAAGLELVPV 19 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~ 19 (264)
+|+.+++.+.+.|+++++.
T Consensus 12 iG~~l~~~L~~~g~~V~~~ 30 (219)
T 3dqp_A 12 VGKSLLKSLSTTDYQIYAG 30 (219)
T ss_dssp HHHHHHHHHTTSSCEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEE
Confidence 4899999988889998864
No 177
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=65.57 E-value=25 Score=26.28 Aligned_cols=72 Identities=10% Similarity=0.186 Sum_probs=40.0
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHhc--CCCeEEecCCCCHHHHHHHHHccCCcEEEccchhH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~--g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSl 116 (264)
.+.++++..+....||.|++|+..|.. -.+.++...+. .+|+|+-|.--+.+......+ .+.--++.-.++.
T Consensus 48 ~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~-~g~~~~l~Kp~~~ 122 (152)
T 3eul_A 48 DDGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRVLLISAHDEPAIVYQALQ-QGAAGFLLKDSTR 122 (152)
T ss_dssp SSHHHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEEEEEESCCCHHHHHHHHH-TTCSEEEETTCCH
T ss_pred CCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeEEEEEccCCHHHHHHHHH-cCCCEEEecCCCH
Confidence 456666666666679988999987752 34555555443 455655554444444433333 4433334344444
No 178
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=65.19 E-value=24 Score=28.94 Aligned_cols=74 Identities=14% Similarity=0.117 Sum_probs=44.4
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.++|.+++....+.. ..+++..+.+.....+ .+..|++.++.+.+.++..
T Consensus 17 iG~~~a~~l~~~G~~V~~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 77 (247)
T 2hq1_A 17 LGKAIAWKLGNMGANIVLNGSPAS-------------------TSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTA 77 (247)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTC-------------------SHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEcCcCH-------------------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 488999888888988875423221 1111111211111222 3457999999999888876
Q ss_pred Hhc--CCCeEEecCCCC
Q 024671 79 SKV--GVPFVMGTTGGD 93 (264)
Q Consensus 79 ~~~--g~plViGTTG~~ 93 (264)
.+. ++.+|+-..|..
T Consensus 78 ~~~~~~~d~vi~~Ag~~ 94 (247)
T 2hq1_A 78 MDAFGRIDILVNNAGIT 94 (247)
T ss_dssp HHHHSCCCEEEECC---
T ss_pred HHhcCCCCEEEECCCCC
Confidence 654 788999888864
No 179
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=65.13 E-value=21 Score=26.54 Aligned_cols=49 Identities=14% Similarity=0.190 Sum_probs=29.6
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHh--cCCCeEEecCCCC
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSK--VGVPFVMGTTGGD 93 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~--~g~plViGTTG~~ 93 (264)
.+.++++..+....||.|++|...|. .-.+.++...+ ..+|+|+- |+..
T Consensus 36 ~~~~~al~~~~~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~l-s~~~ 87 (141)
T 3cu5_A 36 DDGINAIQIALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFM-SGYS 87 (141)
T ss_dssp SSHHHHHHHHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEE-CCST
T ss_pred ccHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEE-eCCC
Confidence 45555666555567898899999885 23444554443 24565554 4554
No 180
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=65.03 E-value=17 Score=32.94 Aligned_cols=88 Identities=18% Similarity=0.223 Sum_probs=51.8
Q ss_pred ChHHHHHHHHh----CCCeEEEEEcCC-----------Cccccc----------cccccCceeEeecCCchhhHHhhhhc
Q 024671 1 MGKAVIKAADA----AGLELVPVSFGT-----------EEESGQ----------KVEVCGKEIQVHGLSDRESVLASVFD 55 (264)
Q Consensus 1 MG~~i~~~~~~----~~~eLv~~~~~~-----------~~~~g~----------~~~~~~~~i~i~~~~dl~~~l~~~~~ 55 (264)
.|+.+.+++.+ ++++|+++.+.. ....|+ .+.+.+..+.+....|+++. . ..+
T Consensus 13 iGr~l~r~l~~~~~~~~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~l-~-~~~ 90 (339)
T 2x5j_O 13 IGRNVVRALYESGRRAEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHERSLQSL-P-WRE 90 (339)
T ss_dssp HHHHHHHHHHHTSGGGTEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGGC-C-HHH
T ss_pred HHHHHHHHHHcCCCCCCEEEEEEeCCCCHHHHHHHhcccccCCCCCceEEEcCCeeEECCEEEEEEecCChHHC-c-ccc
Confidence 38999998865 689999875531 001111 11122334555543443321 0 111
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHhcCCC-eEEecCC
Q 024671 56 KYPNMIVVDYTVPAAVNGNAELYSKVGVP-FVMGTTG 91 (264)
Q Consensus 56 ~~~d~VvIDFS~p~~~~~~~~~~~~~g~p-lViGTTG 91 (264)
..+| +|++-|-.....+.....++.|.+ +||-..+
T Consensus 91 ~~vD-vV~e~tg~~~s~e~a~~~l~~GakkVVId~~a 126 (339)
T 2x5j_O 91 LGVD-VVLDCTGVYGSREHGEAHIAAGAKKVLFSHPG 126 (339)
T ss_dssp HTCS-EEEECSSSCCSHHHHHHHHHTTCSEEEESSCC
T ss_pred cCCC-EEEECCCccccHHHHHHHHHcCCCEEEEeccc
Confidence 2578 899988777778888888888988 4555544
No 181
>3h5l_A Putative branched-chain amino acid ABC transporter; structural genomics, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi}
Probab=65.02 E-value=28 Score=31.05 Aligned_cols=57 Identities=19% Similarity=0.146 Sum_probs=40.5
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCC-eEEecCCCCHHHHHHH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVP-FVMGTTGGDRVRLHET 100 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~p-lViGTTG~~~~~~~~l 100 (264)
.|....+.++....+|+|++....|+.+...++.+.+.|.+ .++++.||...++...
T Consensus 206 ~d~~~~l~~i~~~~~d~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (419)
T 3h5l_A 206 SDWGPTLAKLRADPPAVIVVTHFYPQDQALFMNQFMTDPTNSLVYLQYGASLAAFRDI 263 (419)
T ss_dssp SCCHHHHHHHHHSCCSEEEECCCCHHHHHHHHHHHTTSCCSCEEEECSGGGSHHHHHH
T ss_pred ccHHHHHHHHHhcCCCEEEEccccCchHHHHHHHHHHcCCCceEEecCCCCcHHHHHh
Confidence 46666677777778995555545677788889999888865 5678888865554443
No 182
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=64.67 E-value=17 Score=31.06 Aligned_cols=87 Identities=16% Similarity=0.058 Sum_probs=49.7
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECC-ChHHHHHHHHHH-
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYT-VPAAVNGNAELY- 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS-~p~~~~~~~~~~- 78 (264)
||+.+++.+.+.|+++.. +++.+... + .....++.+. .++++++. .+| +||=.. .|..+...+...
T Consensus 11 mG~~~a~~l~~~g~~V~~-~~~~~~~~-~--~~~~~g~~~~--~~~~~~~~-----~~D-vvi~~vp~~~~~~~v~~~~~ 78 (296)
T 2gf2_A 11 MGNPMAKNLMKHGYPLII-YDVFPDAC-K--EFQDAGEQVV--SSPADVAE-----KAD-RIITMLPTSINAIEAYSGAN 78 (296)
T ss_dssp THHHHHHHHHHTTCCEEE-ECSSTHHH-H--HHHTTTCEEC--SSHHHHHH-----HCS-EEEECCSSHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHCCCEEEE-EeCCHHHH-H--HHHHcCCeec--CCHHHHHh-----cCC-EEEEeCCCHHHHHHHHhCch
Confidence 899999988878888763 45433211 0 1111233332 35555443 478 566665 677777766531
Q ss_pred -----HhcCCCeEEecCCCCHHHHHHH
Q 024671 79 -----SKVGVPFVMGTTGGDRVRLHET 100 (264)
Q Consensus 79 -----~~~g~plViGTTG~~~~~~~~l 100 (264)
++.+..+|. ++|.+.+..+.+
T Consensus 79 ~~~~~l~~~~~vv~-~s~~~~~~~~~~ 104 (296)
T 2gf2_A 79 GILKKVKKGSLLID-SSTIDPAVSKEL 104 (296)
T ss_dssp SGGGTCCTTCEEEE-CSCCCHHHHHHH
T ss_pred hHHhcCCCCCEEEE-CCCCCHHHHHHH
Confidence 234554555 889987655544
No 183
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=64.39 E-value=3.7 Score=31.70 Aligned_cols=52 Identities=17% Similarity=0.243 Sum_probs=37.5
Q ss_pred CCchhhHHhhhhcCCCCEEEEECCChHHH-HHHHHHHHhcCCCeEEecCCCCHH
Q 024671 43 LSDRESVLASVFDKYPNMIVVDYTVPAAV-NGNAELYSKVGVPFVMGTTGGDRV 95 (264)
Q Consensus 43 ~~dl~~~l~~~~~~~~d~VvIDFS~p~~~-~~~~~~~~~~g~plViGTTG~~~~ 95 (264)
.++-+++++.+....||.|+.|..-|..- .+.++...+.++|+|+ .||+++.
T Consensus 39 a~~g~eAl~~~~~~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~-lTa~~~~ 91 (123)
T 2lpm_A 39 ASRMQEALDIARKGQFDIAIIDVNLDGEPSYPVADILAERNVPFIF-ATGYGSK 91 (123)
T ss_dssp SCCHHHHHHHHHHCCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCC-BCTTCTT
T ss_pred ECCHHHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEE-EecCccH
Confidence 45677778777777899889999999522 3455566677899665 5688754
No 184
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=64.29 E-value=60 Score=27.60 Aligned_cols=73 Identities=12% Similarity=0.216 Sum_probs=45.9
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++....+.. +.+++..+++...... .+..|.|.++.+.+.++.+
T Consensus 41 IG~aia~~la~~G~~V~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 101 (280)
T 4da9_A 41 IGLGIARALAASGFDIAITGIGDA-------------------EGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAV 101 (280)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCCH-------------------HHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEEEeCCCH-------------------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 478888888888888764321111 1122222222222223 3456999999999999988
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 102 ~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 102 VAEFGRIDCLVNNAGI 117 (280)
T ss_dssp HHHHSCCCEEEEECC-
T ss_pred HHHcCCCCEEEECCCc
Confidence 775 78899988886
No 185
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=64.20 E-value=7.4 Score=34.12 Aligned_cols=107 Identities=9% Similarity=0.078 Sum_probs=52.2
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
||+.+++.+...|+++.. .++..... ..+ ...++......++++.+ ..+| +||..+.+..+.+..-...+
T Consensus 168 iG~~~a~~l~~~G~~V~~-~d~~~~~~-~~~--~~~g~~~~~~~~l~~~l-----~~aD-vVi~~~p~~~i~~~~~~~mk 237 (300)
T 2rir_A 168 TGMTIARTFAALGANVKV-GARSSAHL-ARI--TEMGLVPFHTDELKEHV-----KDID-ICINTIPSMILNQTVLSSMT 237 (300)
T ss_dssp HHHHHHHHHHHTTCEEEE-EESSHHHH-HHH--HHTTCEEEEGGGHHHHS-----TTCS-EEEECCSSCCBCHHHHTTSC
T ss_pred HHHHHHHHHHHCCCEEEE-EECCHHHH-HHH--HHCCCeEEchhhHHHHh-----hCCC-EEEECCChhhhCHHHHHhCC
Confidence 688999888888898764 45432110 000 00122221123444433 2578 78887766433221111122
Q ss_pred cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHHH
Q 024671 81 VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQV 118 (264)
Q Consensus 81 ~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlGv 118 (264)
.+.-+|--.+|-..-++ +.++..++.++..||++-++
T Consensus 238 ~g~~lin~a~g~~~~~~-~~a~~~G~~~i~~pg~~g~v 274 (300)
T 2rir_A 238 PKTLILDLASRPGGTDF-KYAEKQGIKALLAPGLPGIV 274 (300)
T ss_dssp TTCEEEECSSTTCSBCH-HHHHHHTCEEEECCCHHHHH
T ss_pred CCCEEEEEeCCCCCcCH-HHHHHCCCEEEECCCCCCcH
Confidence 33323332233111123 33344467777899988766
No 186
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=64.13 E-value=19 Score=26.59 Aligned_cols=72 Identities=15% Similarity=0.209 Sum_probs=37.5
Q ss_pred chhhHHhhhhc--CCCCEEEEECCChHH-HHHHHHHHHhc--CCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHH
Q 024671 45 DRESVLASVFD--KYPNMIVVDYTVPAA-VNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQ 117 (264)
Q Consensus 45 dl~~~l~~~~~--~~~d~VvIDFS~p~~-~~~~~~~~~~~--g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlG 117 (264)
+..+++..+.. ..+|.|++|+..|.. -.+.++...+. .+|+|+-|.--+.+...... ..+.--++.-.++..
T Consensus 53 ~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~-~~ga~~~l~Kp~~~~ 129 (146)
T 4dad_A 53 GRAAQIVQRTDGLDAFDILMIDGAALDTAELAAIEKLSRLHPGLTCLLVTTDASSQTLLDAM-RAGVRDVLRWPLEPR 129 (146)
T ss_dssp CCHHHHTTCHHHHTTCSEEEEECTTCCHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHH-TTTEEEEEESSCCHH
T ss_pred CHHHHHHHHHhcCCCCCEEEEeCCCCCccHHHHHHHHHHhCCCCcEEEEeCCCCHHHHHHHH-HhCCceeEcCCCCHH
Confidence 33434444433 578988999998853 34445444443 46666655434444333332 344333444445554
No 187
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=64.09 E-value=37 Score=29.34 Aligned_cols=91 Identities=11% Similarity=0.084 Sum_probs=53.8
Q ss_pred ChHHHHHHHHhCCC---eEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGL---ELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAEL 77 (264)
Q Consensus 1 MG~~i~~~~~~~~~---eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~ 77 (264)
||+.+++.+.+.|+ ++. .+++.+... +.+ ....++.+. .+..+++. .+| +||=-..|+.+.+.++.
T Consensus 14 mG~aia~~l~~~g~~~~~V~-v~dr~~~~~-~~l-~~~~gi~~~--~~~~~~~~-----~aD-vVilav~p~~~~~vl~~ 82 (280)
T 3tri_A 14 MARNIVVGLIANGYDPNRIC-VTNRSLDKL-DFF-KEKCGVHTT--QDNRQGAL-----NAD-VVVLAVKPHQIKMVCEE 82 (280)
T ss_dssp HHHHHHHHHHHTTCCGGGEE-EECSSSHHH-HHH-HHTTCCEEE--SCHHHHHS-----SCS-EEEECSCGGGHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCeEE-EEeCCHHHH-HHH-HHHcCCEEe--CChHHHHh-----cCC-eEEEEeCHHHHHHHHHH
Confidence 79999988887777 655 345443211 000 011134442 34444432 578 67878888888877766
Q ss_pred HHh----cCCCeEEecCCCCHHHHHHHHH
Q 024671 78 YSK----VGVPFVMGTTGGDRVRLHETIE 102 (264)
Q Consensus 78 ~~~----~g~plViGTTG~~~~~~~~l~~ 102 (264)
... .+..+|.-+.|++.+.++....
T Consensus 83 l~~~~l~~~~iiiS~~agi~~~~l~~~l~ 111 (280)
T 3tri_A 83 LKDILSETKILVISLAVGVTTPLIEKWLG 111 (280)
T ss_dssp HHHHHHTTTCEEEECCTTCCHHHHHHHHT
T ss_pred HHhhccCCCeEEEEecCCCCHHHHHHHcC
Confidence 543 2335666678898877766543
No 188
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=64.07 E-value=32 Score=29.04 Aligned_cols=73 Identities=15% Similarity=0.115 Sum_probs=46.2
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++...+.|..++....+.. ..+++..+.+.....+ .+..|.|.++.+.+.++.+
T Consensus 30 IG~aia~~l~~~G~~V~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 90 (270)
T 3is3_A 30 IGAAVAVHLGRLGAKVVVNYANST-------------------KDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQA 90 (270)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCH-------------------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCH-------------------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 488888888888888775322211 0112222222222223 3467999999999999888
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.++|-..|.
T Consensus 91 ~~~~g~id~lvnnAg~ 106 (270)
T 3is3_A 91 VAHFGHLDIAVSNSGV 106 (270)
T ss_dssp HHHHSCCCEEECCCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 765 68889888775
No 189
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=63.93 E-value=21 Score=33.07 Aligned_cols=83 Identities=16% Similarity=0.168 Sum_probs=49.8
Q ss_pred ChHHHHHHHH-h--CCCeEEEEEcCC-----------Ccccccc----------ccccCceeEeecCCchhhHHhhhhcC
Q 024671 1 MGKAVIKAAD-A--AGLELVPVSFGT-----------EEESGQK----------VEVCGKEIQVHGLSDRESVLASVFDK 56 (264)
Q Consensus 1 MG~~i~~~~~-~--~~~eLv~~~~~~-----------~~~~g~~----------~~~~~~~i~i~~~~dl~~~l~~~~~~ 56 (264)
+||.+.+++. + ++++|+++-+.. ....|+- +.+.+..+.+....|+++. . ..+.
T Consensus 13 IGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~l-~-w~~~ 90 (380)
T 2d2i_A 13 IGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISYDENSITVNGKTMKIVCDRNPLNL-P-WKEW 90 (380)
T ss_dssp HHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEEETTEEEETTEEEEEECCSCGGGC-C-HHHH
T ss_pred HHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEEEeCCeEEECCeEEEEEecCChHHC-C-cccC
Confidence 4899999986 4 679999864421 1111111 1122334555544454432 0 1112
Q ss_pred CCCEEEEECCChHHHHHHHHHHHhcCCCeE
Q 024671 57 YPNMIVVDYTVPAAVNGNAELYSKVGVPFV 86 (264)
Q Consensus 57 ~~d~VvIDFS~p~~~~~~~~~~~~~g~plV 86 (264)
.+| +|++.|-.....+.....++.|.+-|
T Consensus 91 gvD-vV~e~TG~f~s~e~a~~hl~aGakkV 119 (380)
T 2d2i_A 91 DID-LVIESTGVFVTAEGASKHIQAGAKKV 119 (380)
T ss_dssp TCC-EEEECSSSCCBHHHHHHHHHTTCSEE
T ss_pred CCC-EEEECCCccccHHHHHHHHHcCCcEE
Confidence 578 89998877777888888888898844
No 190
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=63.74 E-value=22 Score=32.24 Aligned_cols=86 Identities=12% Similarity=0.169 Sum_probs=52.5
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCC-Ccccccccc-----ccCc-eeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHH
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGT-EEESGQKVE-----VCGK-EIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVN 72 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~-~~~~g~~~~-----~~~~-~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~ 72 (264)
+|+.+.+.+. .++++|+....+. .+..|+.+. ..+. .+.+....+.+ ++. ..+| |++.-+-.....
T Consensus 16 vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~----~~~-~~~D-vvf~a~p~~~s~ 89 (337)
T 3dr3_A 16 AGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDIS----EFS-PGVD-VVFLATAHEVSH 89 (337)
T ss_dssp HHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGG----GTC-TTCS-EEEECSCHHHHH
T ss_pred HHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHH----HHh-cCCC-EEEECCChHHHH
Confidence 4899999887 5899999765533 124565542 2221 23332110111 111 2578 677444445568
Q ss_pred HHHHHHHhcCCCeEEecCCC
Q 024671 73 GNAELYSKVGVPFVMGTTGG 92 (264)
Q Consensus 73 ~~~~~~~~~g~plViGTTG~ 92 (264)
+.+..+.+.|+.+|.-++-|
T Consensus 90 ~~~~~~~~~g~~vIDlSa~f 109 (337)
T 3dr3_A 90 DLAPQFLEAGCVVFDLSGAF 109 (337)
T ss_dssp HHHHHHHHTTCEEEECSSTT
T ss_pred HHHHHHHHCCCEEEEcCCcc
Confidence 89999999999999888776
No 191
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=63.68 E-value=29 Score=25.42 Aligned_cols=48 Identities=17% Similarity=0.200 Sum_probs=29.8
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHhc----CCCeEEecCC
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV----GVPFVMGTTG 91 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~----g~plViGTTG 91 (264)
.+.++++..+....||.|++|+..|.. -.+.++...+. .+|+|+-|.-
T Consensus 34 ~~~~~al~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~~ 86 (138)
T 3c3m_A 34 FSGEECLEALNATPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTAK 86 (138)
T ss_dssp SSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEESS
T ss_pred CCHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEECC
Confidence 344555555555678988999998852 34555555543 4677665543
No 192
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=63.29 E-value=22 Score=27.91 Aligned_cols=55 Identities=11% Similarity=0.028 Sum_probs=32.9
Q ss_pred EeecCCchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHh--cCCCeEEecCCCCH
Q 024671 39 QVHGLSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK--VGVPFVMGTTGGDR 94 (264)
Q Consensus 39 ~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~--~g~plViGTTG~~~ 94 (264)
.+....+.++++..+....||.|++|...|.. -.+.++...+ ..+|+|+ .|+...
T Consensus 33 ~v~~~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~-lt~~~~ 90 (184)
T 3rqi_A 33 AVRQAHNKDEALKLAGAEKFEFITVXLHLGNDSGLSLIAPLCDLQPDARILV-LTGYAS 90 (184)
T ss_dssp EEEEECSHHHHHHHHTTSCCSEEEECSEETTEESHHHHHHHHHHCTTCEEEE-EESSCC
T ss_pred EEEEeCCHHHHHHHHhhCCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEEE-EeCCCC
Confidence 33334566677777766779988999998852 2334444433 2455555 445543
No 193
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=63.17 E-value=48 Score=28.63 Aligned_cols=55 Identities=15% Similarity=0.197 Sum_probs=39.1
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCC-eEEecCCCCHHHHHH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVP-FVMGTTGGDRVRLHE 99 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~p-lViGTTG~~~~~~~~ 99 (264)
.|....+..+....|| +|+=++.+..+...++.+.+.|.. .++|+.||...++..
T Consensus 191 ~d~~~~~~~l~~~~~d-~v~~~~~~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 246 (366)
T 3td9_A 191 QDFSAQLSVAMSFNPD-AIYITGYYPEIALISRQARQLGFTGYILAGDGADAPELIE 246 (366)
T ss_dssp CCCHHHHHHHHHTCCS-EEEECSCHHHHHHHHHHHHHTTCCSEEEECGGGCSTHHHH
T ss_pred ccHHHHHHHHHhcCCC-EEEEccchhHHHHHHHHHHHcCCCceEEeeCCcCCHHHHH
Confidence 4555666666667899 566667777888899999998753 567888886554433
No 194
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=63.09 E-value=12 Score=33.23 Aligned_cols=31 Identities=16% Similarity=0.126 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHhcCCC--eEEecCC----CCHHHHHH
Q 024671 69 AAVNGNAELYSKVGVP--FVMGTTG----GDRVRLHE 99 (264)
Q Consensus 69 ~~~~~~~~~~~~~g~p--lViGTTG----~~~~~~~~ 99 (264)
+++..++++.++.|+. +|.|||| ++.+|..+
T Consensus 28 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~ 64 (297)
T 3flu_A 28 EQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTA 64 (297)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHH
Confidence 5677777777777776 4557777 35555443
No 195
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=62.61 E-value=16 Score=33.41 Aligned_cols=80 Identities=18% Similarity=0.182 Sum_probs=48.6
Q ss_pred hHHHHH-HHHhCC---CeEEEEEcCCCcccccccc-ccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHH
Q 024671 2 GKAVIK-AADAAG---LELVPVSFGTEEESGQKVE-VCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAE 76 (264)
Q Consensus 2 G~~i~~-~~~~~~---~eLv~~~~~~~~~~g~~~~-~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~ 76 (264)
|+.+.+ .+.+++ .++.....+ ..|+.+. ..+..+.+....+.+. + ..+| ++++.+-.....+...
T Consensus 14 G~~llr~ll~~~~~~~v~i~~~~~~---s~G~~v~~~~g~~i~~~~~~~~~~-~-----~~~D-vVf~a~g~~~s~~~a~ 83 (367)
T 1t4b_A 14 GSVLMQRMVEERDFDAIRPVFFSTS---QLGQAAPSFGGTTGTLQDAFDLEA-L-----KALD-IIVTCQGGDYTNEIYP 83 (367)
T ss_dssp HHHHHHHHHHTTGGGGSEEEEEESS---STTSBCCGGGTCCCBCEETTCHHH-H-----HTCS-EEEECSCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCeEEEEEEEeC---CCCCCccccCCCceEEEecCChHH-h-----cCCC-EEEECCCchhHHHHHH
Confidence 899999 455554 445433222 2444432 2223344443333222 2 2578 7998888899999999
Q ss_pred HHHhcCCC-eEEecCC
Q 024671 77 LYSKVGVP-FVMGTTG 91 (264)
Q Consensus 77 ~~~~~g~p-lViGTTG 91 (264)
.+.+.|++ +||.-++
T Consensus 84 ~~~~~G~k~vVID~ss 99 (367)
T 1t4b_A 84 KLRESGWQGYWIDAAS 99 (367)
T ss_dssp HHHHTTCCCEEEECSS
T ss_pred HHHHCCCCEEEEcCCh
Confidence 99999984 6776655
No 196
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=62.51 E-value=8.3 Score=34.55 Aligned_cols=23 Identities=13% Similarity=0.167 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHhcCCC--eEEecCC
Q 024671 69 AAVNGNAELYSKVGVP--FVMGTTG 91 (264)
Q Consensus 69 ~~~~~~~~~~~~~g~p--lViGTTG 91 (264)
+++..++++.++.|+. +|.||||
T Consensus 33 ~~l~~lv~~li~~Gv~Gl~v~GtTG 57 (316)
T 3e96_A 33 HHYKETVDRIVDNGIDVIVPCGNTS 57 (316)
T ss_dssp HHHHHHHHHHHTTTCCEECTTSGGG
T ss_pred HHHHHHHHHHHHcCCCEEEeCcccc
Confidence 4555555555555554 3345555
No 197
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=62.51 E-value=30 Score=31.32 Aligned_cols=80 Identities=24% Similarity=0.221 Sum_probs=47.1
Q ss_pred ChHHHHHHHH-h--CCCeEEEEEcCC-----------Ccccccc----------ccccCceeEeecCCchhhHHhhhhcC
Q 024671 1 MGKAVIKAAD-A--AGLELVPVSFGT-----------EEESGQK----------VEVCGKEIQVHGLSDRESVLASVFDK 56 (264)
Q Consensus 1 MG~~i~~~~~-~--~~~eLv~~~~~~-----------~~~~g~~----------~~~~~~~i~i~~~~dl~~~l~~~~~~ 56 (264)
.|+.+.+++. + +++||++..+.. ....|+- +.+.+..+.+....|.++. . ..+.
T Consensus 11 iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~l-~-w~~~ 88 (332)
T 1hdg_O 11 IGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDPSKL-P-WKDL 88 (332)
T ss_dssp HHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSGGGS-C-HHHH
T ss_pred HHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEEcCCEEEECCeEEEEEecCChHHC-c-cccc
Confidence 3899999886 6 889999875521 1111211 1112334555533343322 0 0112
Q ss_pred CCCEEEEECCChHHHHHHHHHHHhcCC
Q 024671 57 YPNMIVVDYTVPAAVNGNAELYSKVGV 83 (264)
Q Consensus 57 ~~d~VvIDFS~p~~~~~~~~~~~~~g~ 83 (264)
.+| +|++-|-.....+..+..++.|.
T Consensus 89 ~vD-vV~~atg~~~s~e~a~~~l~aGa 114 (332)
T 1hdg_O 89 GVD-FVIESTGVFRNREKAELHLQAGA 114 (332)
T ss_dssp TCC-EEEECSSSCCBHHHHTHHHHTTC
T ss_pred CCC-EEEECCccchhHHHHHHHHHcCC
Confidence 578 78987777777788888888887
No 198
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=62.48 E-value=16 Score=26.42 Aligned_cols=67 Identities=15% Similarity=0.142 Sum_probs=34.0
Q ss_pred hHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHhc--CCCeEEecCCCCHHHHHHHHHccCC-cEEEccchhH
Q 024671 48 SVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNV-YAVISPQMGK 116 (264)
Q Consensus 48 ~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~--g~plViGTTG~~~~~~~~l~~~~~~-~~v~s~NfSl 116 (264)
+++..+....||.|++|...|.. -.+.++...+. .+|+|+-|.--+.+...... ..+. ..+.-| ++.
T Consensus 37 ~a~~~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~-~~g~~~~l~kp-~~~ 107 (134)
T 3f6c_A 37 SAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCA-DAGANGFVSKK-EGM 107 (134)
T ss_dssp THHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEECC---CTHHHHH-HTTCSEEEEGG-GCT
T ss_pred HHHHHHHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEeCCCChHHHHHHH-HhCCCEEEeCC-CCH
Confidence 34444445579988999998752 34455554443 45655544433333333333 3443 344444 554
No 199
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=62.39 E-value=17 Score=34.30 Aligned_cols=120 Identities=12% Similarity=0.103 Sum_probs=62.9
Q ss_pred ChHHHHHHHHhC-CCeEEEEEcCCCccccccccccCce-eEeec--CCchhhHHhhhhcCCCCEEEEECCChHHHHHHHH
Q 024671 1 MGKAVIKAADAA-GLELVPVSFGTEEESGQKVEVCGKE-IQVHG--LSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAE 76 (264)
Q Consensus 1 MG~~i~~~~~~~-~~eLv~~~~~~~~~~g~~~~~~~~~-i~i~~--~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~ 76 (264)
||+.+++.+.+. +.+++. .++............+.. +.++. .+++.+++. .+| +||.-+.+..-....+
T Consensus 34 iG~aia~~L~~~~g~~V~v-~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~-----~~D-vVIn~tp~~~~~~v~~ 106 (467)
T 2axq_A 34 VAQPVIDTLAANDDINVTV-ACRTLANAQALAKPSGSKAISLDVTDDSALDKVLA-----DND-VVISLIPYTFHPNVVK 106 (467)
T ss_dssp THHHHHHHHHTSTTEEEEE-EESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHH-----TSS-EEEECSCGGGHHHHHH
T ss_pred HHHHHHHHHHhCCCCeEEE-EECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHc-----CCC-EEEECCchhhhHHHHH
Confidence 689999888754 777653 343321110000001111 12211 112333322 578 7999987765566788
Q ss_pred HHHhcCCCeEEecCCCCHH--HHHHHHHccCCcEEEccchhHHH--HHHHHHHHHH
Q 024671 77 LYSKVGVPFVMGTTGGDRV--RLHETIENSNVYAVISPQMGKQV--VAFLAAMEIM 128 (264)
Q Consensus 77 ~~~~~g~plViGTTG~~~~--~~~~l~~~~~~~~v~s~NfSlGv--~ll~~~~~~a 128 (264)
.|++.|+.++. ++-+++. .+.+.++++++.++-...|.-|+ .+..+++.++
T Consensus 107 a~l~~g~~vvd-~~~~~p~~~~Ll~~Ak~aGv~~i~g~G~~PG~~~~~a~~li~q~ 161 (467)
T 2axq_A 107 SAIRTKTDVVT-SSYISPALRELEPEIVKAGITVMNEIGLDPGIDHLYAVKTIDEV 161 (467)
T ss_dssp HHHHHTCEEEE-CSCCCHHHHHHHHHHHHHTCEEECSCBBTTBHHHHHHHHHHHHH
T ss_pred HHHhcCCEEEE-eecCCHHHHHHHHHHHHcCCEEEecCCcCccchHHHHHHHHHHH
Confidence 89999988775 4434443 34344555666666655563342 2223344454
No 200
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=61.78 E-value=17 Score=30.63 Aligned_cols=90 Identities=17% Similarity=0.183 Sum_probs=53.7
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
||+.+++.+.+.++++. ..++.+... +.+. ...++.+ ..++++++. .+| +||-.+.|....+.++.+ +
T Consensus 14 mG~~~a~~l~~~g~~v~-~~~~~~~~~-~~~~-~~~g~~~--~~~~~~~~~-----~~D-~Vi~~v~~~~~~~v~~~l-~ 81 (259)
T 2ahr_A 14 MASAIIKGLKQTPHELI-ISGSSLERS-KEIA-EQLALPY--AMSHQDLID-----QVD-LVILGIKPQLFETVLKPL-H 81 (259)
T ss_dssp HHHHHHHHHTTSSCEEE-EECSSHHHH-HHHH-HHHTCCB--CSSHHHHHH-----TCS-EEEECSCGGGHHHHHTTS-C
T ss_pred HHHHHHHHHHhCCCeEE-EECCCHHHH-HHHH-HHcCCEe--eCCHHHHHh-----cCC-EEEEEeCcHhHHHHHHHh-c
Confidence 78889888777777654 455433211 0000 0012332 235555443 578 788888888887777654 3
Q ss_pred cCCCeEEecCCCCHHHHHHHHH
Q 024671 81 VGVPFVMGTTGGDRVRLHETIE 102 (264)
Q Consensus 81 ~g~plViGTTG~~~~~~~~l~~ 102 (264)
.+..+|.-++|.+.++++++..
T Consensus 82 ~~~~vv~~~~~~~~~~l~~~~~ 103 (259)
T 2ahr_A 82 FKQPIISMAAGISLQRLATFVG 103 (259)
T ss_dssp CCSCEEECCTTCCHHHHHHHHC
T ss_pred cCCEEEEeCCCCCHHHHHHhcC
Confidence 5666666777898877766654
No 201
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=61.51 E-value=15 Score=32.59 Aligned_cols=32 Identities=28% Similarity=0.191 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHhcCCC--eEEecCC----CCHHHHHHH
Q 024671 69 AAVNGNAELYSKVGVP--FVMGTTG----GDRVRLHET 100 (264)
Q Consensus 69 ~~~~~~~~~~~~~g~p--lViGTTG----~~~~~~~~l 100 (264)
+++..++++.++.|+. +|.|||| ++.+|..++
T Consensus 36 ~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v 73 (304)
T 3l21_A 36 ATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIEL 73 (304)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHH
Confidence 6788888888888876 5568888 355554443
No 202
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=61.46 E-value=14 Score=25.72 Aligned_cols=51 Identities=14% Similarity=0.063 Sum_probs=30.1
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHhc----CCCeEEecCCCCH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSKV----GVPFVMGTTGGDR 94 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~~----g~plViGTTG~~~ 94 (264)
.+.++++..+....+|.|++|+..|. .-.+.++...+. .+|+|+-|.-.+.
T Consensus 32 ~~~~~~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~~~~ 87 (119)
T 2j48_A 32 VDGSTALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGEPPV 87 (119)
T ss_dssp SCHHHHHHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESSCCS
T ss_pred cCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCCCCc
Confidence 34455555555557898899998774 234555555443 5677665544333
No 203
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=61.45 E-value=20 Score=30.92 Aligned_cols=102 Identities=13% Similarity=0.113 Sum_probs=51.7
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECC-ChHHHHHHHH---
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYT-VPAAVNGNAE--- 76 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS-~p~~~~~~~~--- 76 (264)
||+.+++.+.+.|+++.. +++.+... +. ....++.. ..++++++. .+| +||-.. .|..+.+.+.
T Consensus 14 mG~~~a~~l~~~G~~V~~-~d~~~~~~-~~--~~~~g~~~--~~~~~~~~~-----~aD-vvi~~vp~~~~~~~v~~~~~ 81 (302)
T 2h78_A 14 MGAPMATNLLKAGYLLNV-FDLVQSAV-DG--LVAAGASA--ARSARDAVQ-----GAD-VVISMLPASQHVEGLYLDDD 81 (302)
T ss_dssp THHHHHHHHHHTTCEEEE-ECSSHHHH-HH--HHHTTCEE--CSSHHHHHT-----TCS-EEEECCSCHHHHHHHHHSSS
T ss_pred HHHHHHHHHHhCCCeEEE-EcCCHHHH-HH--HHHCCCeE--cCCHHHHHh-----CCC-eEEEECCCHHHHHHHHcCch
Confidence 899999988888998874 45432111 00 11112333 235555442 578 455444 5776776665
Q ss_pred HHH---hcCCCeEEecCCCCHH---HHHHHHHccCCcEEEccchh
Q 024671 77 LYS---KVGVPFVMGTTGGDRV---RLHETIENSNVYAVISPQMG 115 (264)
Q Consensus 77 ~~~---~~g~plViGTTG~~~~---~~~~l~~~~~~~~v~s~NfS 115 (264)
... ..+. +|+-++..... ++.+.....+..++-+|++.
T Consensus 82 ~~~~~l~~~~-~vi~~st~~~~~~~~l~~~~~~~g~~~~~~pv~~ 125 (302)
T 2h78_A 82 GLLAHIAPGT-LVLECSTIAPTSARKIHAAARERGLAMLDAPVSG 125 (302)
T ss_dssp CGGGSSCSSC-EEEECSCCCHHHHHHHHHHHHHTTCCEEECCEES
T ss_pred hHHhcCCCCc-EEEECCCCCHHHHHHHHHHHHHcCCEEEEEEccC
Confidence 222 2333 44444444443 33333333345555566554
No 204
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=61.11 E-value=35 Score=27.20 Aligned_cols=73 Identities=11% Similarity=0.126 Sum_probs=40.8
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHhc--CCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQ 117 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~--g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlG 117 (264)
.+.++++..+....||.|++|...|.. -.+.++...+. .+|+|+=|.--+.+...... ..+.--++.-.|+..
T Consensus 38 ~~~~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~ls~~~~~~~~~~~~-~~Ga~~~l~Kp~~~~ 113 (215)
T 1a04_A 38 SNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTAL-KRGADGYLLKDMEPE 113 (215)
T ss_dssp SSHHHHHHHHHHHCCSEEEEETTSTTSCHHHHHHHHHHSCCCSEEEEEECCCCHHHHHHHH-HTTCSEEEETTCCHH
T ss_pred CCHHHHHHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEECCCCHHHHHHHH-HcCCcEEEeCCCCHH
Confidence 455556665555679988999999852 34555555554 35555554433444333333 345433444456654
No 205
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=60.94 E-value=14 Score=26.61 Aligned_cols=48 Identities=10% Similarity=0.127 Sum_probs=30.6
Q ss_pred CCchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHhc----CCCeEEecC
Q 024671 43 LSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV----GVPFVMGTT 90 (264)
Q Consensus 43 ~~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~----g~plViGTT 90 (264)
..+.++++..+....||.|++|...|.. -.+.++...+. .+|+|+-|.
T Consensus 33 ~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~ 85 (127)
T 3i42_A 33 VMSGTDALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSG 85 (127)
T ss_dssp ESSHHHHHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEEC
T ss_pred ECCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEEC
Confidence 3456666766666789988999988752 34555555553 355555443
No 206
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=60.79 E-value=51 Score=27.60 Aligned_cols=41 Identities=20% Similarity=0.322 Sum_probs=28.6
Q ss_pred HhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEecC
Q 024671 50 LASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT 90 (264)
Q Consensus 50 l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGTT 90 (264)
+..+....+|.+++--+.++...+.++.+.+.|+|+|.--+
T Consensus 54 i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~ 94 (305)
T 3g1w_A 54 LEQAIAKNPAGIAISAIDPVELTDTINKAVDAGIPIVLFDS 94 (305)
T ss_dssp HHHHHHHCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESS
T ss_pred HHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEECC
Confidence 34444457896566555666677888999999999987544
No 207
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=60.78 E-value=15 Score=30.27 Aligned_cols=72 Identities=24% Similarity=0.320 Sum_probs=38.8
Q ss_pred chhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHh-cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHH
Q 024671 45 DRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSK-VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQ 117 (264)
Q Consensus 45 dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~-~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlG 117 (264)
+.++++..+....||.|++|...|. .-.+.++...+ ..+|+|+=|.--+.+......+ .+.--++.-.++..
T Consensus 37 ~~~~al~~l~~~~~dlvilD~~l~~~~g~~~~~~lr~~~~~~ii~lt~~~~~~~~~~~~~-~Ga~~~l~Kp~~~~ 110 (238)
T 2gwr_A 37 DGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLE-SGADDYIMKPFKPK 110 (238)
T ss_dssp CGGGHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHTTCCCCEEEEEETTCCSCHHHHHH-TTCCEEEEESCCHH
T ss_pred CHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEEeCCCCHHHHHHHHH-CCCCEEEeCCCCHH
Confidence 4444555554557998899999885 23344544444 3677777655444333333333 34333344445543
No 208
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=60.74 E-value=14 Score=27.17 Aligned_cols=56 Identities=9% Similarity=0.097 Sum_probs=33.6
Q ss_pred EeecCCchhhHHhhhhc-CCCCEEEEECCChH-HHHHHHHHHHhc--CCCeEEecCCCCH
Q 024671 39 QVHGLSDRESVLASVFD-KYPNMIVVDYTVPA-AVNGNAELYSKV--GVPFVMGTTGGDR 94 (264)
Q Consensus 39 ~i~~~~dl~~~l~~~~~-~~~d~VvIDFS~p~-~~~~~~~~~~~~--g~plViGTTG~~~ 94 (264)
.+....+.++++..+.. ..+|.|++|+..|. .-.+.++...+. .+|+|+-||+...
T Consensus 41 ~v~~~~~~~~al~~l~~~~~~dlvilD~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~~~ 100 (138)
T 2b4a_A 41 EVTVHPSGSAFFQHRSQLSTCDLLIVSDQLVDLSIFSLLDIVKEQTKQPSVLILTTGRHE 100 (138)
T ss_dssp EEEEESSHHHHHHTGGGGGSCSEEEEETTCTTSCHHHHHHHHTTSSSCCEEEEEESCC--
T ss_pred EEEEeCCHHHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCCCC
Confidence 33334566667766666 67998899999885 234455554443 4666665535543
No 209
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=60.66 E-value=21 Score=33.82 Aligned_cols=89 Identities=13% Similarity=0.154 Sum_probs=48.1
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCcccccccc-ccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVE-VCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~-~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (264)
||+.++..+.+.|+++.. .++.+........ ..+.++.. ..++++++..+ ..+|+|++=-..+..+.+.++...
T Consensus 26 MG~~lA~~La~~G~~V~v-~~r~~~~~~~l~~~~~~~gi~~--~~s~~e~v~~l--~~aDvVil~Vp~~~~v~~vl~~l~ 100 (480)
T 2zyd_A 26 MGRNLALNIESRGYTVSI-FNRSREKTEEVIAENPGKKLVP--YYTVKEFVESL--ETPRRILLMVKAGAGTDAAIDSLK 100 (480)
T ss_dssp HHHHHHHHHHTTTCCEEE-ECSSHHHHHHHHHHSTTSCEEE--CSSHHHHHHTB--CSSCEEEECSCSSSHHHHHHHHHG
T ss_pred HHHHHHHHHHhCCCeEEE-EeCCHHHHHHHHhhCCCCCeEE--eCCHHHHHhCC--CCCCEEEEECCCHHHHHHHHHHHH
Confidence 899999988888998763 4543321100000 00113333 34666554422 137843333333356777776554
Q ss_pred h---cCCCeEEecCCCCH
Q 024671 80 K---VGVPFVMGTTGGDR 94 (264)
Q Consensus 80 ~---~g~plViGTTG~~~ 94 (264)
. .+..+|.++||...
T Consensus 101 ~~l~~g~iIId~s~g~~~ 118 (480)
T 2zyd_A 101 PYLDKGDIIIDGGNTFFQ 118 (480)
T ss_dssp GGCCTTCEEEECSCCCHH
T ss_pred hhcCCCCEEEECCCCCHH
Confidence 3 35667778888843
No 210
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=60.64 E-value=34 Score=27.55 Aligned_cols=76 Identities=17% Similarity=0.197 Sum_probs=40.2
Q ss_pred EeecCCchhhHHhhhhcC-------------CCCEEEEECCChHH-HHHHHHHHHh------cCCCeEEecCCC-CHHHH
Q 024671 39 QVHGLSDRESVLASVFDK-------------YPNMIVVDYTVPAA-VNGNAELYSK------VGVPFVMGTTGG-DRVRL 97 (264)
Q Consensus 39 ~i~~~~dl~~~l~~~~~~-------------~~d~VvIDFS~p~~-~~~~~~~~~~------~g~plViGTTG~-~~~~~ 97 (264)
.+....+.+++++.+... .+|.|++|+..|.. -.+.++...+ ..+|+|+-|.-- +.+..
T Consensus 88 ~v~~a~~~~eal~~l~~~~~~~~~~~~~~~~~~dlillD~~lp~~~G~el~~~lr~~~~~~~~~~piI~ls~~~~~~~~~ 167 (206)
T 3mm4_A 88 EVEQCDSGKEALRLVTEGLTQREEQGSVDKLPFDYIFMDCQMPEMDGYEATREIRKVEKSYGVRTPIIAVSGHDPGSEEA 167 (206)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHHHTCSSCCSCSEEEEESCCSSSCHHHHHHHHHHHHHTTTCCCCEEEEESSCCCHHHH
T ss_pred eeeeeCCHHHHHHHHHhhcccccccccccCCCCCEEEEcCCCCCCCHHHHHHHHHhhhhhcCCCCcEEEEECCCCcHHHH
Confidence 444445667777655443 68988999998852 2344444443 356766655433 33333
Q ss_pred HHHHHccCCcEEEccchh
Q 024671 98 HETIENSNVYAVISPQMG 115 (264)
Q Consensus 98 ~~l~~~~~~~~v~s~NfS 115 (264)
....+ .+.--++.-.|+
T Consensus 168 ~~~~~-~Ga~~~l~KP~~ 184 (206)
T 3mm4_A 168 RETIQ-AGMDAFLDKSLN 184 (206)
T ss_dssp HHHHH-HTCSEEEETTCT
T ss_pred HHHHh-CCCCEEEcCcHH
Confidence 33333 343333333455
No 211
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=60.63 E-value=26 Score=29.49 Aligned_cols=73 Identities=14% Similarity=0.122 Sum_probs=45.9
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++....+.. +.+++.++.+.....+ .+..|+|.++.+.+.++.+
T Consensus 38 IG~~la~~l~~~G~~v~i~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 98 (267)
T 4iiu_A 38 IGRAIARQLAADGFNIGVHYHRDA-------------------AGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHE 98 (267)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCH-------------------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeCCch-------------------HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 378888888888888764332221 1112222222222222 3567999999999999877
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 99 ~~~~g~id~li~nAg~ 114 (267)
T 4iiu_A 99 IAQHGAWYGVVSNAGI 114 (267)
T ss_dssp HHHHCCCSEEEECCCC
T ss_pred HHHhCCccEEEECCCC
Confidence 664 67888888775
No 212
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=60.44 E-value=53 Score=28.66 Aligned_cols=21 Identities=29% Similarity=0.289 Sum_probs=16.7
Q ss_pred ChHHHHHHHHhCCCeEEEEEcC
Q 024671 1 MGKAVIKAADAAGLELVPVSFG 22 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~ 22 (264)
||+.+++.+.+.|++|.+ .++
T Consensus 16 MG~~mA~~L~~~G~~V~v-~dr 36 (297)
T 4gbj_A 16 LGTPIAEILLEAGYELVV-WNR 36 (297)
T ss_dssp THHHHHHHHHHTTCEEEE-C--
T ss_pred HHHHHHHHHHHCCCeEEE-EeC
Confidence 999999999999999874 453
No 213
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=60.15 E-value=26 Score=25.31 Aligned_cols=49 Identities=18% Similarity=0.180 Sum_probs=27.6
Q ss_pred chhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHhc--CCCeEEecCCCC
Q 024671 45 DRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSKV--GVPFVMGTTGGD 93 (264)
Q Consensus 45 dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~~--g~plViGTTG~~ 93 (264)
+.++++..+....||.|++|+..|. .-.+.++...+. ..+.|+-.|+..
T Consensus 36 ~~~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~~ii~ls~~~ 87 (130)
T 1dz3_A 36 NGQDCLQMLEEKRPDILLLDIIMPHLDGLAVLERIRAGFEHQPNVIMLTAFG 87 (130)
T ss_dssp SHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHHCSSCCEEEEEEETT
T ss_pred CHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCcEEEEecCC
Confidence 4455555555557898899999885 234455554442 233344444554
No 214
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=60.09 E-value=50 Score=24.49 Aligned_cols=74 Identities=16% Similarity=0.200 Sum_probs=37.9
Q ss_pred CCchhhHHhhhhcCCC-CEEEEECCChHH-HHHHHHHHHh--cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhH
Q 024671 43 LSDRESVLASVFDKYP-NMIVVDYTVPAA-VNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 43 ~~dl~~~l~~~~~~~~-d~VvIDFS~p~~-~~~~~~~~~~--~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSl 116 (264)
..+.++++..+....+ |.|++|...|.. -.+.++...+ ..+|+|+-|...+.+......+....--++.-.++.
T Consensus 33 ~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~~~ 110 (151)
T 3kcn_A 33 CESGPEALACIKKSDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVYLMLTGNQDLTTAMEAVNEGQVFRFLNKPCQM 110 (151)
T ss_dssp ESSHHHHHHHHHHSCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEEEEEECGGGHHHHHHHHHHTCCSEEEESSCCH
T ss_pred eCCHHHHHHHHHcCCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEEEEEECCCCHHHHHHHHHcCCeeEEEcCCCCH
Confidence 3456666666655555 988999998752 2344444333 345666555444444443333333233333333443
No 215
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=60.03 E-value=53 Score=24.79 Aligned_cols=117 Identities=8% Similarity=-0.001 Sum_probs=59.1
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeE-eecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQ-VHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~-i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (264)
||+.+++.+.+.|++++. ++..+... +.+ ...+++ +.+...-++.|....-..+|.|++-...++.....+..+.
T Consensus 18 ~G~~la~~L~~~g~~v~v-id~~~~~~-~~~--~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a~ 93 (140)
T 3fwz_A 18 VGSLLGEKLLASDIPLVV-IETSRTRV-DEL--RERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGEIVASAR 93 (140)
T ss_dssp HHHHHHHHHHHTTCCEEE-EESCHHHH-HHH--HHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEE-EECCHHHH-HHH--HHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHHHHHHHHH
Confidence 588999988888998885 45433211 001 011222 2111111223443322357843444444544444555555
Q ss_pred hc-CCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHHHHHHHH
Q 024671 80 KV-GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLA 123 (264)
Q Consensus 80 ~~-g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlGv~ll~~ 123 (264)
+. +..-|+.-. -+++..+.+.+ .++-.+++|....+-.++..
T Consensus 94 ~~~~~~~iiar~-~~~~~~~~l~~-~G~d~vi~p~~~~a~~i~~~ 136 (140)
T 3fwz_A 94 AKNPDIEIIARA-HYDDEVAYITE-RGANQVVMGEREIARTMLEL 136 (140)
T ss_dssp HHCSSSEEEEEE-SSHHHHHHHHH-TTCSEEEEHHHHHHHHHHHH
T ss_pred HHCCCCeEEEEE-CCHHHHHHHHH-CCCCEEECchHHHHHHHHHH
Confidence 53 333333332 34455555544 56778889998887655443
No 216
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=59.90 E-value=18 Score=31.80 Aligned_cols=11 Identities=18% Similarity=0.286 Sum_probs=5.4
Q ss_pred CCeEEecCCCC
Q 024671 83 VPFVMGTTGGD 93 (264)
Q Consensus 83 ~plViGTTG~~ 93 (264)
+|+++||.+.+
T Consensus 70 ~pviaGvg~~~ 80 (289)
T 2yxg_A 70 VQVIAGAGSNC 80 (289)
T ss_dssp SEEEEECCCSS
T ss_pred CcEEEeCCCCC
Confidence 45555554444
No 217
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=59.85 E-value=26 Score=27.52 Aligned_cols=19 Identities=26% Similarity=0.359 Sum_probs=15.6
Q ss_pred ChHHHHHHHHhCCCeEEEE
Q 024671 1 MGKAVIKAADAAGLELVPV 19 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~ 19 (264)
+|+.+++.+.+.|+++++.
T Consensus 15 iG~~l~~~l~~~g~~V~~~ 33 (206)
T 1hdo_A 15 TGLTTLAQAVQAGYEVTVL 33 (206)
T ss_dssp HHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHCCCeEEEE
Confidence 3889999988889998864
No 218
>4gnr_A ABC transporter substrate-binding protein-branche amino acid transport; amino acid-binding protein, surface-exposed protein; HET: MLY; 1.00A {Streptococcus pneumoniae}
Probab=59.54 E-value=66 Score=27.62 Aligned_cols=53 Identities=13% Similarity=0.094 Sum_probs=39.2
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCC-CeEEecCCCCHHHH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGV-PFVMGTTGGDRVRL 97 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~-plViGTTG~~~~~~ 97 (264)
.|....+..+....|| +|+=++.+......++.+.+.|. +.++|+.|+...++
T Consensus 183 ~d~~~~l~~i~~~~~d-~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 236 (353)
T 4gnr_A 183 TDFQAALTKMKGKDFD-AIVVPGYYNEAGKIVNQARGMGIDKPIVGGDGFNGEEF 236 (353)
T ss_dssp CCCHHHHHHHHTSCCS-EEECCSCHHHHHHHHHHHHHTTCCSCEEECGGGCSHHH
T ss_pred CCHHHHHHHHHhcCCC-EEEEecCcHHHHHHHHHHHHcCCCCcEEEecccccchh
Confidence 4666677777778899 67777777778889999999885 34677777765443
No 219
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=59.44 E-value=14 Score=32.60 Aligned_cols=31 Identities=19% Similarity=0.175 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHhcCCC--eEEecCC----CCHHHHHH
Q 024671 69 AAVNGNAELYSKVGVP--FVMGTTG----GDRVRLHE 99 (264)
Q Consensus 69 ~~~~~~~~~~~~~g~p--lViGTTG----~~~~~~~~ 99 (264)
+++..++++.++.|+. +|.|||| ++.+|..+
T Consensus 22 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~ 58 (291)
T 3tak_A 22 KSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQ 58 (291)
T ss_dssp HHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHH
Confidence 5667777777777766 4557777 35554433
No 220
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=59.34 E-value=30 Score=27.40 Aligned_cols=52 Identities=15% Similarity=0.173 Sum_probs=31.2
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHhc-CCCeEEecCCCCHHH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSKV-GVPFVMGTTGGDRVR 96 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~~-g~plViGTTG~~~~~ 96 (264)
.+.++++..+....||.|++|...|. .-.+.++...+. ..|+|+ .|+....+
T Consensus 45 ~~~~~al~~~~~~~~dlvi~D~~~p~~~g~~~~~~l~~~~~~pii~-lt~~~~~~ 98 (205)
T 1s8n_A 45 GDGQEAVELAELHKPDLVIMDVKMPRRDGIDAASEIASKRIAPIVV-LTAFSQRD 98 (205)
T ss_dssp SSHHHHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHTTCSCEEE-EEEGGGHH
T ss_pred CCHHHHHHHHhhcCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEE-EecCCCHH
Confidence 45556666555567998899999885 234455554443 345544 55554433
No 221
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=59.24 E-value=8.1 Score=28.59 Aligned_cols=51 Identities=10% Similarity=0.270 Sum_probs=28.6
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHh----cCCCeEEecCCCCH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK----VGVPFVMGTTGGDR 94 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~----~g~plViGTTG~~~ 94 (264)
.+.++++..+....+|.|++|+..|.. -.+.++...+ ..+|+|+-|.-.+.
T Consensus 33 ~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~ 88 (140)
T 3n53_A 33 KNEKEALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPLILLFSSEHK 88 (140)
T ss_dssp SSHHHHHHHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCEEEEECC---
T ss_pred CCHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCEEEEecCCCH
Confidence 455666666666679988999998853 2344444444 35677776654333
No 222
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=59.16 E-value=74 Score=26.15 Aligned_cols=72 Identities=18% Similarity=0.207 Sum_probs=46.9
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCC--CEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYP--NMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~--d~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++.. ++... .+++..+++..... ..+..|++.++.+...++.+
T Consensus 21 iG~~~a~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (253)
T 3qiv_A 21 IGQAYAEALAREGAAVVVA-DINAE-------------------AAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRT 80 (253)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-cCCHH-------------------HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4889999888889887753 33211 11222222211122 23567999999999999887
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 81 ~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 81 LAEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 765 78899988886
No 223
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=59.09 E-value=85 Score=26.83 Aligned_cols=69 Identities=16% Similarity=0.181 Sum_probs=46.0
Q ss_pred hhhhcCCCCEEEEECCCh---HHHHHHHHHHHhcC--CCeEEecCCCCHHHHHHHHHccCC-cEEEccchhHHHHHHHHH
Q 024671 51 ASVFDKYPNMIVVDYTVP---AAVNGNAELYSKVG--VPFVMGTTGGDRVRLHETIENSNV-YAVISPQMGKQVVAFLAA 124 (264)
Q Consensus 51 ~~~~~~~~d~VvIDFS~p---~~~~~~~~~~~~~g--~plViGTTG~~~~~~~~l~~~~~~-~~v~s~NfSlGv~ll~~~ 124 (264)
+.+....||.|.+=++.+ ..+.+.++.+.+.+ +|+++|=..++++ +++ .+ ..+|+++.+-.+.+..++
T Consensus 168 ~~~~~~~~d~V~lS~l~~~~~~~~~~~i~~l~~~~~~~~v~vGG~~~~~~----~~~--~igad~~~~da~~av~~~~~l 241 (258)
T 2i2x_B 168 AAVQKEKPIMLTGTALMTTTMYAFKEVNDMLLENGIKIPFACGGGAVNQD----FVS--QFALGVYGEEAADAPKIADAI 241 (258)
T ss_dssp HHHHHHCCSEEEEECCCTTTTTHHHHHHHHHHTTTCCCCEEEESTTCCHH----HHH--TSTTEEECSSTTHHHHHHHHH
T ss_pred HHHHHcCCCEEEEEeeccCCHHHHHHHHHHHHhcCCCCcEEEECccCCHH----HHH--HcCCeEEECCHHHHHHHHHHH
Confidence 333445789667776543 45667777776654 8999998888753 222 33 468999998887665554
Q ss_pred H
Q 024671 125 M 125 (264)
Q Consensus 125 ~ 125 (264)
+
T Consensus 242 ~ 242 (258)
T 2i2x_B 242 I 242 (258)
T ss_dssp H
T ss_pred H
Confidence 3
No 224
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=58.83 E-value=39 Score=24.62 Aligned_cols=60 Identities=18% Similarity=0.232 Sum_probs=31.9
Q ss_pred CCCCEEEEECCChHH-HHHHHHHHHh---cCCCeEEecCCCC-HHHHHHHHHccCCcEEEccchhHH
Q 024671 56 KYPNMIVVDYTVPAA-VNGNAELYSK---VGVPFVMGTTGGD-RVRLHETIENSNVYAVISPQMGKQ 117 (264)
Q Consensus 56 ~~~d~VvIDFS~p~~-~~~~~~~~~~---~g~plViGTTG~~-~~~~~~l~~~~~~~~v~s~NfSlG 117 (264)
..||.|++|...|.. -.+.++...+ ...|+|+- |+.. .+...... ..+.--++.-.++..
T Consensus 51 ~~~dlvllD~~mp~~~G~~~~~~lr~~~~~~~~ii~l-t~~~~~~~~~~~~-~~ga~~~l~KP~~~~ 115 (133)
T 2r25_B 51 ENYNMIFMDVQMPKVDGLLSTKMIRRDLGYTSPIVAL-TAFADDSNIKECL-ESGMNGFLSKPIKRP 115 (133)
T ss_dssp CCCSEEEECSCCSSSCHHHHHHHHHHHSCCCSCEEEE-ESCCSHHHHHHHH-HTTCSEEEESSCCHH
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHhhcCCCCCEEEE-ECCCCHHHHHHHH-HcCCCEEEeCCCCHH
Confidence 468988999999852 2344555443 24566654 4554 43333333 344333343345543
No 225
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=58.81 E-value=49 Score=28.10 Aligned_cols=73 Identities=14% Similarity=0.182 Sum_probs=46.1
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+++++.+.+.|..++....+.. ..+++..+.+...... .+..|+|.++.+.+.++.+
T Consensus 43 IG~aia~~la~~G~~V~~~~~~~~-------------------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 103 (271)
T 3v2g_A 43 IGAAIAKRLALEGAAVALTYVNAA-------------------ERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRET 103 (271)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCH-------------------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCH-------------------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 488888888888888775322211 0111122222211222 3567999999999999887
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 104 ~~~~g~iD~lvnnAg~ 119 (271)
T 3v2g_A 104 VEALGGLDILVNSAGI 119 (271)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCcEEEECCCC
Confidence 764 78899988885
No 226
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=58.25 E-value=24 Score=29.74 Aligned_cols=81 Identities=17% Similarity=0.044 Sum_probs=44.2
Q ss_pred ChHHHHHHHHhC-CCeEEEEEcCCCccccccccccCce-eEeecCCchhhHHhhhhcCCCCEEEEECCCh--------HH
Q 024671 1 MGKAVIKAADAA-GLELVPVSFGTEEESGQKVEVCGKE-IQVHGLSDRESVLASVFDKYPNMIVVDYTVP--------AA 70 (264)
Q Consensus 1 MG~~i~~~~~~~-~~eLv~~~~~~~~~~g~~~~~~~~~-i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p--------~~ 70 (264)
.|+.+++.+.+. +.++++..- .+.... .....+.. +..+ ..|.+. +.... ..+| +||....+ ..
T Consensus 12 iG~~l~~~L~~~~g~~V~~~~R-~~~~~~-~~~~~~v~~~~~D-~~d~~~-l~~~~-~~~d-~vi~~a~~~~~~~~~~~~ 85 (289)
T 3e48_A 12 LGTHITNQAIANHIDHFHIGVR-NVEKVP-DDWRGKVSVRQLD-YFNQES-MVEAF-KGMD-TVVFIPSIIHPSFKRIPE 85 (289)
T ss_dssp HHHHHHHHHHHTTCTTEEEEES-SGGGSC-GGGBTTBEEEECC-TTCHHH-HHHHT-TTCS-EEEECCCCCCSHHHHHHH
T ss_pred HHHHHHHHHhhCCCCcEEEEEC-CHHHHH-HhhhCCCEEEEcC-CCCHHH-HHHHH-hCCC-EEEEeCCCCccchhhHHH
Confidence 388999987765 899886533 221111 00001111 1111 123222 23322 2578 78888654 56
Q ss_pred HHHHHHHHHhcCCCeEE
Q 024671 71 VNGNAELYSKVGVPFVM 87 (264)
Q Consensus 71 ~~~~~~~~~~~g~plVi 87 (264)
+...++.|.+.|++-++
T Consensus 86 ~~~l~~aa~~~gv~~iv 102 (289)
T 3e48_A 86 VENLVYAAKQSGVAHII 102 (289)
T ss_dssp HHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHcCCCEEE
Confidence 77889999999976444
No 227
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=58.19 E-value=18 Score=31.88 Aligned_cols=14 Identities=21% Similarity=0.394 Sum_probs=8.6
Q ss_pred CCCeEEecCCCCHH
Q 024671 82 GVPFVMGTTGGDRV 95 (264)
Q Consensus 82 g~plViGTTG~~~~ 95 (264)
++|+++||.+.+.+
T Consensus 69 rvpviaGvg~~~t~ 82 (294)
T 2ehh_A 69 RIKVIAGTGGNATH 82 (294)
T ss_dssp SSEEEEECCCSCHH
T ss_pred CCcEEEecCCCCHH
Confidence 46677777665543
No 228
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=58.03 E-value=13 Score=33.09 Aligned_cols=15 Identities=20% Similarity=0.175 Sum_probs=9.0
Q ss_pred cCCCeEEecCCCCHH
Q 024671 81 VGVPFVMGTTGGDRV 95 (264)
Q Consensus 81 ~g~plViGTTG~~~~ 95 (264)
-++|+++||.+.+..
T Consensus 76 grvpviaGvg~~~t~ 90 (309)
T 3fkr_A 76 GRVPVIVTTSHYSTQ 90 (309)
T ss_dssp TSSCEEEECCCSSHH
T ss_pred CCCcEEEecCCchHH
Confidence 346777776665543
No 229
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=57.94 E-value=50 Score=27.56 Aligned_cols=72 Identities=14% Similarity=0.146 Sum_probs=47.0
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++. +++.. +.+++....+...... .+..|.|.++.+.+.++.+
T Consensus 18 IG~aia~~l~~~G~~V~~-~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 77 (257)
T 3imf_A 18 MGKGMATRFAKEGARVVI-TGRTK-------------------EKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQI 77 (257)
T ss_dssp HHHHHHHHHHHTTCEEEE-EESCH-------------------HHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEE-EeCCH-------------------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 488999988888998775 33321 1122222222222222 3457999999999999888
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 78 ~~~~g~id~lv~nAg~ 93 (257)
T 3imf_A 78 DEKFGRIDILINNAAG 93 (257)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 764 78899988874
No 230
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=57.89 E-value=16 Score=32.58 Aligned_cols=12 Identities=8% Similarity=0.382 Sum_probs=5.7
Q ss_pred CCCeEEecCCCC
Q 024671 82 GVPFVMGTTGGD 93 (264)
Q Consensus 82 g~plViGTTG~~ 93 (264)
++|+++||.+.+
T Consensus 76 rvpViaGvg~~~ 87 (313)
T 3dz1_A 76 SMQVIVGVSAPG 87 (313)
T ss_dssp TSEEEEECCCSS
T ss_pred CCcEEEecCCCC
Confidence 345555544443
No 231
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=57.76 E-value=41 Score=30.16 Aligned_cols=80 Identities=16% Similarity=0.158 Sum_probs=50.4
Q ss_pred hHHHHHHHH-h--CCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 2 GKAVIKAAD-A--AGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 2 G~~i~~~~~-~--~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
|+.+.+.+. . +++++++..+.. ..|+.+...+..+.+. +++. ..+ ...| ++++-+-.....+.++.+
T Consensus 16 G~~llr~L~~~~~p~~elv~i~s~~--~~G~~~~~~~~~i~~~---~~~~--~~~--~~vD-vVf~a~g~~~s~~~a~~~ 85 (336)
T 2r00_A 16 GETMLEVLQEREFPVDELFLLASER--SEGKTYRFNGKTVRVQ---NVEE--FDW--SQVH-IALFSAGGELSAKWAPIA 85 (336)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEECTT--TTTCEEEETTEEEEEE---EGGG--CCG--GGCS-EEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCEEEEEEECCC--CCCCceeecCceeEEe---cCCh--HHh--cCCC-EEEECCCchHHHHHHHHH
Confidence 889999887 4 678998765422 2344333333334442 1111 111 2478 788888778889999999
Q ss_pred HhcCCCeEEecCC
Q 024671 79 SKVGVPFVMGTTG 91 (264)
Q Consensus 79 ~~~g~plViGTTG 91 (264)
.+.|+.+|.-+.-
T Consensus 86 ~~~G~~vId~s~~ 98 (336)
T 2r00_A 86 AEAGVVVIDNTSH 98 (336)
T ss_dssp HHTTCEEEECSST
T ss_pred HHcCCEEEEcCCc
Confidence 9999976665543
No 232
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=57.75 E-value=65 Score=30.15 Aligned_cols=78 Identities=13% Similarity=0.107 Sum_probs=43.2
Q ss_pred hHHhhhh-cCCCCEEEEECC-------C-hHHHHHHHHHHHh--cCCCeEEecCCC-CHHHHHHHHHccCCcEEEccchh
Q 024671 48 SVLASVF-DKYPNMIVVDYT-------V-PAAVNGNAELYSK--VGVPFVMGTTGG-DRVRLHETIENSNVYAVISPQMG 115 (264)
Q Consensus 48 ~~l~~~~-~~~~d~VvIDFS-------~-p~~~~~~~~~~~~--~g~plViGTTG~-~~~~~~~l~~~~~~~~v~s~NfS 115 (264)
++++.+. +...|.|+++++ . ++.....++...+ .++|+|+...|- ..++..++-+.+++|++ ++..
T Consensus 358 ~al~~~l~dp~vd~vlv~~~~~~~Gg~~~~~~a~~i~~al~~~~~~kPvvv~~~~g~~~~~~~~~L~~~Gip~~--~spe 435 (457)
T 2csu_A 358 RTAKLLLQDPNVDMLIAICVVPTFAGMTLTEHAEGIIRAVKEVNNEKPVLAMFMAGYVSEKAKELLEKNGIPTY--ERPE 435 (457)
T ss_dssp HHHHHHHHSTTCSEEEEEEECCCSTTCCSSHHHHHHHHHHHHHCCCCCEEEEEECTTTTHHHHHHHHTTTCCEE--SSHH
T ss_pred HHHHHHhcCCCCCEEEEEccccccccCCchhHHHHHHHHHHHhcCCCCEEEEeCCCcchHHHHHHHHhCCCCcc--CCHH
Confidence 3444433 345776777773 2 2334455555555 789999865544 33333344445678888 4444
Q ss_pred HHHHHHHHHHHH
Q 024671 116 KQVVAFLAAMEI 127 (264)
Q Consensus 116 lGv~ll~~~~~~ 127 (264)
-.+..+.+++++
T Consensus 436 ~Av~al~~l~~~ 447 (457)
T 2csu_A 436 DVASAAYALVEQ 447 (457)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555555555543
No 233
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=57.74 E-value=19 Score=31.92 Aligned_cols=23 Identities=35% Similarity=0.380 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHhcCCC--eEEecCC
Q 024671 69 AAVNGNAELYSKVGVP--FVMGTTG 91 (264)
Q Consensus 69 ~~~~~~~~~~~~~g~p--lViGTTG 91 (264)
+++..++++.++.|+. +|.||||
T Consensus 37 ~~l~~lv~~li~~Gv~gl~v~GttG 61 (304)
T 3cpr_A 37 AAGREVAAYLVDKGLDSLVLAGTTG 61 (304)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSTTT
T ss_pred HHHHHHHHHHHHcCCCEEEECcccc
Confidence 5677777777777765 3457777
No 234
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=57.39 E-value=43 Score=29.23 Aligned_cols=57 Identities=16% Similarity=0.033 Sum_probs=40.3
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCe---EEecCCCCHHHHHHHH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPF---VMGTTGGDRVRLHETI 101 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~pl---ViGTTG~~~~~~~~l~ 101 (264)
.|....+..+....|| +|+=++.+..+...++.+.+.|+.. ++++.++...++..+.
T Consensus 184 ~d~~~~l~~i~~~~~d-~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 243 (379)
T 3n0w_A 184 QDFSSYLLQAKASGAQ-LIVSTSGGAANINIMKQAREFGLPSKTQKVGGMIDILTDVKSAG 243 (379)
T ss_dssp CCCHHHHHHHHHHTCS-EEEECCCHHHHHHHHHHHHHTTCSCSSCEEECCBCCHHHHHHHC
T ss_pred CCHHHHHHHHHHCCCC-EEEEecccchHHHHHHHHHHcCCCCCCcEEEecccchHHHHhhC
Confidence 4566666666667899 5666777777778999999988753 6777777665665553
No 235
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=57.38 E-value=20 Score=28.91 Aligned_cols=50 Identities=20% Similarity=0.308 Sum_probs=30.1
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHh-cCCCeEEecCCCCH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSK-VGVPFVMGTTGGDR 94 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~-~g~plViGTTG~~~ 94 (264)
.+.++++..+....||.|++|...|. .-.+.++...+ ..+|+|+=| +...
T Consensus 35 ~~~~~al~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~ii~lt-~~~~ 86 (230)
T 2oqr_A 35 TDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVT-ARDS 86 (230)
T ss_dssp CSHHHHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHHCSCSEEEEE-CCHH
T ss_pred CCHHHHHHHHhccCCCEEEEECCCCCCCHHHHHHHHHcCCCCCEEEEe-CCCc
Confidence 45555565555557998899999885 22344444333 467777655 4433
No 236
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=57.35 E-value=25 Score=29.63 Aligned_cols=73 Identities=16% Similarity=0.137 Sum_probs=46.0
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++....+... .+++..+.+.....+ .+..|++.++.+...++.+
T Consensus 38 IG~a~a~~l~~~G~~V~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 98 (272)
T 4e3z_A 38 IGAAVCRLAARQGWRVGVNYAANRE-------------------AADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAV 98 (272)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHH-------------------HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEcCCChh-------------------HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4888888888888887643332211 111112222111222 3456999999999999888
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 99 ~~~~g~id~li~nAg~ 114 (272)
T 4e3z_A 99 DRQFGRLDGLVNNAGI 114 (272)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHhCCCCCEEEECCCC
Confidence 765 78899888775
No 237
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=57.32 E-value=21 Score=31.15 Aligned_cols=67 Identities=12% Similarity=0.060 Sum_probs=46.0
Q ss_pred CchhhHHhhhhcCCCC-EEEEECCChHHHHHHHHHHHhcCCCeEEecCCCCHH--HHHHHHHccCCcEEEccc
Q 024671 44 SDRESVLASVFDKYPN-MIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRV--RLHETIENSNVYAVISPQ 113 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d-~VvIDFS~p~~~~~~~~~~~~~g~plViGTTG~~~~--~~~~l~~~~~~~~v~s~N 113 (264)
+.+..++..+.. ..| .+.||=+.|+++..-++.| .|.++|=-.+|+.+. ++-.++...+.|+|.-++
T Consensus 55 ee~~rvv~~i~~-~~~~pisIDT~~~~v~~aAl~a~--~Ga~iINdvs~~~d~~~~~~~~~a~~~~~vvlmh~ 124 (262)
T 1f6y_A 55 SAMEWLVEVTQE-VSNLTLCLDSTNIKAIEAGLKKC--KNRAMINSTNAEREKVEKLFPLAVEHGAALIGLTM 124 (262)
T ss_dssp HHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHHHC--SSCEEEEEECSCHHHHHHHHHHHHHTTCEEEEESC
T ss_pred HHHHHHHHHHHH-hCCCeEEEeCCCHHHHHHHHhhC--CCCCEEEECCCCcccHHHHHHHHHHhCCcEEEEcC
Confidence 344444444333 235 5799999999888888776 599999999998433 455566667788766554
No 238
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=57.29 E-value=13 Score=29.55 Aligned_cols=47 Identities=19% Similarity=0.253 Sum_probs=30.0
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHhc--CCCeEEecC
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSKV--GVPFVMGTT 90 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~~--g~plViGTT 90 (264)
.+.++++..+....||.|++|...|. .-.+.++...+. ++|+|+=|.
T Consensus 35 ~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~ls~ 84 (208)
T 1yio_A 35 DCASTFLEHRRPEQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVFITA 84 (208)
T ss_dssp SSHHHHHHHCCTTSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEES
T ss_pred CCHHHHHHhhhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEeC
Confidence 45556666555567898899999885 234555555443 577766554
No 239
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=57.26 E-value=51 Score=28.30 Aligned_cols=56 Identities=11% Similarity=0.053 Sum_probs=39.1
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCC-eEEecCCCCHHHHHHH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVP-FVMGTTGGDRVRLHET 100 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~p-lViGTTG~~~~~~~~l 100 (264)
.+....+..+....|| +|+=++.+..+...++.+.+.|+. .++|+.||...++...
T Consensus 181 ~~~~~~~~~l~~~~~d-~i~~~~~~~~a~~~~~~~~~~g~~~p~~~~~~~~~~~~~~~ 237 (358)
T 3hut_A 181 RRFDDVIDEIEDEAPQ-AIYLAMAYEDAAPFLRALRARGSALPVYGSSALYSPKFIDL 237 (358)
T ss_dssp CCCHHHHHHHHHHCCS-EEEEESCHHHHHHHHHHHHHTTCCCCEEECGGGCSHHHHHH
T ss_pred ccHHHHHHHHHhcCCC-EEEEccCchHHHHHHHHHHHcCCCCcEEecCcccCHHHHHH
Confidence 3555556666566799 567677787788899999998754 4678888866554444
No 240
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=57.17 E-value=52 Score=27.42 Aligned_cols=72 Identities=17% Similarity=0.118 Sum_probs=47.2
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcC---CCCEEEEECCChHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDK---YPNMIVVDYTVPAAVNGNAEL 77 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~---~~d~VvIDFS~p~~~~~~~~~ 77 (264)
+|+.+++.+.+.|..++.. ++... .+++..+++... ....+..|+|.++.+...++.
T Consensus 35 IG~~~a~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 94 (266)
T 3o38_A 35 IGSTTARRALLEGADVVIS-DYHER-------------------RLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQ 94 (266)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHCCCEEEEe-cCCHH-------------------HHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHH
Confidence 4788888888888887643 32211 122222222111 222456799999999999998
Q ss_pred HHhc--CCCeEEecCCC
Q 024671 78 YSKV--GVPFVMGTTGG 92 (264)
Q Consensus 78 ~~~~--g~plViGTTG~ 92 (264)
+.+. ++.+||-..|.
T Consensus 95 ~~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 95 TVEKAGRLDVLVNNAGL 111 (266)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHhCCCcEEEECCCc
Confidence 8775 78899988886
No 241
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=57.17 E-value=43 Score=24.45 Aligned_cols=51 Identities=22% Similarity=0.182 Sum_probs=31.7
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHhc-CCCeEEecCCCCH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSKV-GVPFVMGTTGGDR 94 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~~-g~plViGTTG~~~ 94 (264)
.+.++++..+....+|.|++|...|. .-.+.++...+. ..+.|+-.|+...
T Consensus 42 ~~~~~al~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~ 94 (143)
T 2qv0_A 42 DDGLDVLKFLQHNKVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKE 94 (143)
T ss_dssp SCHHHHHHHHHHCCCSEEEECSSCSSSCHHHHHHHHTTSTTCCEEEEEESCCT
T ss_pred CCHHHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHccCCCceEEEEeCCHH
Confidence 45566666655567998899999885 234455554443 3455666667644
No 242
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=57.13 E-value=16 Score=32.31 Aligned_cols=23 Identities=30% Similarity=0.303 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHhcCCC--eEEecCC
Q 024671 69 AAVNGNAELYSKVGVP--FVMGTTG 91 (264)
Q Consensus 69 ~~~~~~~~~~~~~g~p--lViGTTG 91 (264)
+++..++++.++.|+. +|.||||
T Consensus 33 ~~l~~lv~~li~~Gv~gl~v~GtTG 57 (301)
T 1xky_A 33 AKTTKLVNYLIDNGTTAIVVGGTTG 57 (301)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSTTT
T ss_pred HHHHHHHHHHHHcCCCEEEECcccc
Confidence 4455555555555554 2345555
No 243
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=57.09 E-value=13 Score=33.34 Aligned_cols=31 Identities=19% Similarity=0.200 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHhcCCC--eEEecCC----CCHHHHHH
Q 024671 69 AAVNGNAELYSKVGVP--FVMGTTG----GDRVRLHE 99 (264)
Q Consensus 69 ~~~~~~~~~~~~~g~p--lViGTTG----~~~~~~~~ 99 (264)
+++..++++.++.|+. +|.|||| ++.+|..+
T Consensus 44 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~ 80 (314)
T 3qze_A 44 DSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQ 80 (314)
T ss_dssp HHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHH
Confidence 6677777777777775 5557777 35555444
No 244
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=56.72 E-value=21 Score=31.59 Aligned_cols=23 Identities=26% Similarity=0.485 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHhcCCC--eEEecCC
Q 024671 69 AAVNGNAELYSKVGVP--FVMGTTG 91 (264)
Q Consensus 69 ~~~~~~~~~~~~~g~p--lViGTTG 91 (264)
+++..++++.++.|+. +|.||||
T Consensus 32 ~~l~~lv~~li~~Gv~Gl~v~GtTG 56 (303)
T 2wkj_A 32 ASLRRLVQFNIQQGIDGLYVGGSTG 56 (303)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSTTT
T ss_pred HHHHHHHHHHHHcCCCEEEECeecc
Confidence 5566666666666664 3456666
No 245
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=56.48 E-value=17 Score=25.62 Aligned_cols=47 Identities=17% Similarity=0.229 Sum_probs=28.3
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHh--cCCCeEEecC
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK--VGVPFVMGTT 90 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~--~g~plViGTT 90 (264)
.+.++++..+....||.|++|...|.. -.+.++...+ ...|+|+-|.
T Consensus 32 ~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~ 81 (116)
T 3a10_A 32 ENGEEALKKFFSGNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTA 81 (116)
T ss_dssp SSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEES
T ss_pred CCHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEEC
Confidence 344555555555678988999998852 2344444443 3467666554
No 246
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=56.46 E-value=38 Score=28.54 Aligned_cols=73 Identities=16% Similarity=0.102 Sum_probs=46.2
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcC--CCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDK--YPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~--~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++....+.. ..+++.+..+... ....+..|+|.++.+...++.+
T Consensus 37 IG~~~a~~l~~~G~~v~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 97 (269)
T 3gk3_A 37 LGAAISRRLHDAGMAVAVSHSERN-------------------DHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKV 97 (269)
T ss_dssp HHHHHHHHHHTTTCEEEEEECSCH-------------------HHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEcCCch-------------------HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 478888888888888764321211 0111112221111 2234567999999999999888
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 98 ~~~~g~id~li~nAg~ 113 (269)
T 3gk3_A 98 LADFGKVDVLINNAGI 113 (269)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 775 78899988885
No 247
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=56.43 E-value=20 Score=32.90 Aligned_cols=42 Identities=17% Similarity=0.111 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHhcCCC--eEEecCC----CCHHHHHHH----HHc-cC-CcEEE
Q 024671 69 AAVNGNAELYSKVGVP--FVMGTTG----GDRVRLHET----IEN-SN-VYAVI 110 (264)
Q Consensus 69 ~~~~~~~~~~~~~g~p--lViGTTG----~~~~~~~~l----~~~-~~-~~~v~ 110 (264)
+++..++++.++.|+. +|.|||| ++.+|..++ .+. ++ +|++.
T Consensus 80 ~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 133 (360)
T 4dpp_A 80 EAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIG 133 (360)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 7889999999999987 5569999 466665443 222 33 67765
No 248
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=56.40 E-value=27 Score=33.22 Aligned_cols=90 Identities=18% Similarity=0.182 Sum_probs=43.9
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
||+.++..+.+.|+++++ .++.+.....-......+..+....+++++.+.+ ..+|+|++=-..++.+.+.++....
T Consensus 15 MG~~lA~~L~~~G~~V~v-~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l--~~aDvVil~Vp~~~~v~~vl~~l~~ 91 (484)
T 4gwg_A 15 MGQNLILNMNDHGFVVCA-FNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKL--KKPRRIILLVKAGQAVDDFIEKLVP 91 (484)
T ss_dssp HHHHHHHHHHHTTCCEEE-ECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTB--CSSCEEEECSCSSHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHhcccCCCceeccCCHHHHHhhc--cCCCEEEEecCChHHHHHHHHHHHH
Confidence 899999888888998874 4544321100000000111222224555544322 1467433333333456555554433
Q ss_pred ---cCCCeEEecCCCC
Q 024671 81 ---VGVPFVMGTTGGD 93 (264)
Q Consensus 81 ---~g~plViGTTG~~ 93 (264)
.|.-+|.++|+..
T Consensus 92 ~L~~g~iIId~st~~~ 107 (484)
T 4gwg_A 92 LLDTGDIIIDGGNSEY 107 (484)
T ss_dssp GCCTTCEEEECSCCCH
T ss_pred hcCCCCEEEEcCCCCc
Confidence 3555666666663
No 249
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=56.31 E-value=43 Score=29.35 Aligned_cols=52 Identities=12% Similarity=0.090 Sum_probs=40.0
Q ss_pred EEEEECCChHHHHHHHHHHHhcCCCeEEecCCCCH--HHHHHHHHccCCcEEEccc
Q 024671 60 MIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDR--VRLHETIENSNVYAVISPQ 113 (264)
Q Consensus 60 ~VvIDFS~p~~~~~~~~~~~~~g~plViGTTG~~~--~~~~~l~~~~~~~~v~s~N 113 (264)
.+.||=+.|+++...++.| .|.++|--.+|..+ +++-.++...+.|++.-++
T Consensus 80 pisIDT~~~~v~~aal~a~--~Ga~iINdvs~~~d~~~~~~~~~a~~~~~vv~m~~ 133 (271)
T 2yci_X 80 PCCLDSTNPDAIEAGLKVH--RGHAMINSTSADQWKMDIFFPMAKKYEAAIIGLTM 133 (271)
T ss_dssp CEEEECSCHHHHHHHHHHC--CSCCEEEEECSCHHHHHHHHHHHHHHTCEEEEESC
T ss_pred eEEEeCCCHHHHHHHHHhC--CCCCEEEECCCCccccHHHHHHHHHcCCCEEEEec
Confidence 3799999999888888776 59999999999864 4555566667788766554
No 250
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=56.13 E-value=42 Score=28.58 Aligned_cols=81 Identities=21% Similarity=0.162 Sum_probs=45.3
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCC-hHHHHHHH----
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTV-PAAVNGNA---- 75 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~-p~~~~~~~---- 75 (264)
||+.+++.+...|+++. .+++.+... +.+ ...++.+ ..++++++. .+| +||-.+. |..+...+
T Consensus 16 ~G~~~a~~l~~~g~~V~-~~~~~~~~~-~~~--~~~g~~~--~~~~~~~~~-----~~D-~vi~~v~~~~~~~~~~~~~~ 83 (299)
T 1vpd_A 16 MGKPMSKNLLKAGYSLV-VSDRNPEAI-ADV--IAAGAET--ASTAKAIAE-----QCD-VIITMLPNSPHVKEVALGEN 83 (299)
T ss_dssp THHHHHHHHHHTTCEEE-EECSCHHHH-HHH--HHTTCEE--CSSHHHHHH-----HCS-EEEECCSSHHHHHHHHHSTT
T ss_pred HHHHHHHHHHhCCCEEE-EEeCCHHHH-HHH--HHCCCee--cCCHHHHHh-----CCC-EEEEECCCHHHHHHHHhCcc
Confidence 89999988887788875 345432111 011 1112333 235555443 478 5666664 66666655
Q ss_pred --HHHHhcCCCeEEecCCCC
Q 024671 76 --ELYSKVGVPFVMGTTGGD 93 (264)
Q Consensus 76 --~~~~~~g~plViGTTG~~ 93 (264)
..+.+.+..+|.-+||..
T Consensus 84 ~l~~~l~~~~~vv~~s~~~~ 103 (299)
T 1vpd_A 84 GIIEGAKPGTVLIDMSSIAP 103 (299)
T ss_dssp CHHHHCCTTCEEEECSCCCH
T ss_pred hHhhcCCCCCEEEECCCCCH
Confidence 223345666777777763
No 251
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=56.12 E-value=61 Score=27.09 Aligned_cols=40 Identities=8% Similarity=-0.062 Sum_probs=30.5
Q ss_pred HhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEec
Q 024671 50 LASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGT 89 (264)
Q Consensus 50 l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGT 89 (264)
+..+....+|.++|.-+.++.....++.+.+.|+|+|.--
T Consensus 50 i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~ 89 (306)
T 8abp_A 50 IDSLAASGAKGFVICTPDPKLGSAIVAKARGYDMKVIAVD 89 (306)
T ss_dssp HHHHHHTTCCEEEEECSCGGGHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHcCCCEEEEeCCCchhhHHHHHHHHHCCCcEEEeC
Confidence 4444445789777777777888888999999999998654
No 252
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=56.06 E-value=28 Score=31.71 Aligned_cols=84 Identities=18% Similarity=0.195 Sum_probs=48.1
Q ss_pred ChHHHHHHHH-h---CCCeEEEEEcCCC-c--------------cc------cccccccCceeEeecCCchhhHHhhhhc
Q 024671 1 MGKAVIKAAD-A---AGLELVPVSFGTE-E--------------ES------GQKVEVCGKEIQVHGLSDRESVLASVFD 55 (264)
Q Consensus 1 MG~~i~~~~~-~---~~~eLv~~~~~~~-~--------------~~------g~~~~~~~~~i~i~~~~dl~~~l~~~~~ 55 (264)
+||.+.+++. + +++++|+.-+..+ + +. |..+.+.+..+.+....|.++. + ..+
T Consensus 12 IGr~v~r~l~~~~~~~~~evvaInd~~~~~~~a~ll~ydS~hg~f~~~v~~~~~~l~v~g~~i~v~~~~dp~~~-~-w~~ 89 (335)
T 1obf_O 12 IGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRNPAQL-P-WGA 89 (335)
T ss_dssp HHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSCGGGS-C-TTT
T ss_pred HHHHHHHHHHhcCCCCCcEEEEEeCCCCHHHHHHHhccCCcCCCCCCCEEEeCCEEEECCEEEEEEEcCCcccC-C-ccc
Confidence 4899999887 4 5899998755211 0 00 1112233445666543343321 1 112
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHhcCCCeEE
Q 024671 56 KYPNMIVVDYTVPAAVNGNAELYSKVGVPFVM 87 (264)
Q Consensus 56 ~~~d~VvIDFS~p~~~~~~~~~~~~~g~plVi 87 (264)
...| ++++.|-.....+.....++.|..-|+
T Consensus 90 ~gvD-iV~estG~f~s~e~a~~h~~aGakkVv 120 (335)
T 1obf_O 90 LKVD-VVLECTGFFTTKEKAGAHIKGGAKKVI 120 (335)
T ss_dssp TTCS-EEEECSSSCCSHHHHHHHHHHTCSEEE
T ss_pred cCCC-EEEEccCccccHHHHHHHHHcCCCEEE
Confidence 3678 789876666666677777777876333
No 253
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=55.83 E-value=25 Score=31.81 Aligned_cols=110 Identities=10% Similarity=0.051 Sum_probs=59.7
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccc------cccc-cccCcee--EeecCCchhhHHhhhhcCCCCEEEEECCChHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEES------GQKV-EVCGKEI--QVHGLSDRESVLASVFDKYPNMIVVDYTVPAAV 71 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~------g~~~-~~~~~~i--~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~ 71 (264)
||..++..+.+.|+++.. +++.+... +... ..++..+ .+....|+++++. .+| +||=..-+..+
T Consensus 40 mG~alA~~La~~G~~V~l-~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~-----~aD-vVilaVp~~~~ 112 (356)
T 3k96_A 40 WGTALALVLARKGQKVRL-WSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLE-----GVT-DILIVVPSFAF 112 (356)
T ss_dssp HHHHHHHHHHTTTCCEEE-ECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHT-----TCC-EEEECCCHHHH
T ss_pred HHHHHHHHHHHCCCeEEE-EeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHh-----cCC-EEEECCCHHHH
Confidence 788999888888888763 44332110 1000 0111111 0222346655543 578 67766666666
Q ss_pred HHHHHHHHh---cCCCeEEecCCCCHH------HHHHHHHccCCcEEEccchhHH
Q 024671 72 NGNAELYSK---VGVPFVMGTTGGDRV------RLHETIENSNVYAVISPQMGKQ 117 (264)
Q Consensus 72 ~~~~~~~~~---~g~plViGTTG~~~~------~~~~l~~~~~~~~v~s~NfSlG 117 (264)
.+.++.... .+..+|..+.|+..+ .+++........++..|||.--
T Consensus 113 ~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~~~~~vlsgP~~a~e 167 (356)
T 3k96_A 113 HEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQVPMAVISGPSLATE 167 (356)
T ss_dssp HHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCSCCEEEEESSCCHHH
T ss_pred HHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCCCCEEEEECccHHHH
Confidence 666665543 466789999999754 2222211122345778887753
No 254
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=55.69 E-value=15 Score=32.93 Aligned_cols=15 Identities=13% Similarity=0.242 Sum_probs=9.4
Q ss_pred cCCCeEEecCCCCHH
Q 024671 81 VGVPFVMGTTGGDRV 95 (264)
Q Consensus 81 ~g~plViGTTG~~~~ 95 (264)
.++|+++||.+.+..
T Consensus 79 grvpviaGvg~~~t~ 93 (318)
T 3qfe_A 79 PDFPIMAGVGAHSTR 93 (318)
T ss_dssp TTSCEEEECCCSSHH
T ss_pred CCCcEEEeCCCCCHH
Confidence 356777777666543
No 255
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=55.56 E-value=60 Score=28.36 Aligned_cols=55 Identities=16% Similarity=0.098 Sum_probs=37.3
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCC-eEEecCCCCHHHHHH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVP-FVMGTTGGDRVRLHE 99 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~p-lViGTTG~~~~~~~~ 99 (264)
.|....+..+....|| +|+=++.+..+...++.+.+.|.. .++|+.++...++.+
T Consensus 185 ~d~~~~~~~l~~~~~d-av~~~~~~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 240 (392)
T 3lkb_A 185 LDNTALLKRFEQAGVE-YVVHQNVAGPVANILKDAKRLGLKMRHLGAHYTGGPDLIA 240 (392)
T ss_dssp CCCHHHHHHHHHTTCC-EEEEESCHHHHHHHHHHHHHTTCCCEEEECGGGCSHHHHH
T ss_pred cCHHHHHHHHHhcCCC-EEEEecCcchHHHHHHHHHHcCCCceEEEecCcccHHHHH
Confidence 3555666666667899 566556777788999999998865 356666665444333
No 256
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=55.54 E-value=17 Score=32.44 Aligned_cols=31 Identities=19% Similarity=0.044 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHhcCCC--eEEecCC----CCHHHHHH
Q 024671 69 AAVNGNAELYSKVGVP--FVMGTTG----GDRVRLHE 99 (264)
Q Consensus 69 ~~~~~~~~~~~~~g~p--lViGTTG----~~~~~~~~ 99 (264)
+++..++++.++.|+. +|.|||| ++.+|..+
T Consensus 28 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~ 64 (311)
T 3h5d_A 28 DAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELE 64 (311)
T ss_dssp THHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHH
Confidence 5677777777777776 5677888 45555444
No 257
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=55.44 E-value=70 Score=28.03 Aligned_cols=95 Identities=8% Similarity=-0.005 Sum_probs=54.8
Q ss_pred CeEEEEEcCCCccccccccccCcee-EeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEecC-C
Q 024671 14 LELVPVSFGTEEESGQKVEVCGKEI-QVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT-G 91 (264)
Q Consensus 14 ~eLv~~~~~~~~~~g~~~~~~~~~i-~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGTT-G 91 (264)
.+|+++.+..+... +.. ....++ .++ .|.++.|++ ..+| +|+=.|-+..=.+.+..|++.|+++.+=-. +
T Consensus 38 ~~l~av~d~~~~~a-~~~-a~~~g~~~~~--~d~~~ll~~---~~iD-aV~I~tP~~~H~~~~~~al~aGkhVl~EKPla 109 (390)
T 4h3v_A 38 PDLNVLCGRDAEAV-RAA-AGKLGWSTTE--TDWRTLLER---DDVQ-LVDVCTPGDSHAEIAIAALEAGKHVLCEKPLA 109 (390)
T ss_dssp EEEEEEECSSHHHH-HHH-HHHHTCSEEE--SCHHHHTTC---TTCS-EEEECSCGGGHHHHHHHHHHTTCEEEEESSSC
T ss_pred ceEEEEEcCCHHHH-HHH-HHHcCCCccc--CCHHHHhcC---CCCC-EEEEeCChHHHHHHHHHHHHcCCCceeecCcc
Confidence 48998877543211 111 001122 233 466666642 3578 566677777778999999999999887332 2
Q ss_pred CCHHHHHHH---HH---ccCCcEEEccchhH
Q 024671 92 GDRVRLHET---IE---NSNVYAVISPQMGK 116 (264)
Q Consensus 92 ~~~~~~~~l---~~---~~~~~~v~s~NfSl 116 (264)
.+.++-+++ ++ .+++.+....|+-.
T Consensus 110 ~t~~ea~~l~~~~~~~~~~g~~~~v~~~~R~ 140 (390)
T 4h3v_A 110 NTVAEAEAMAAAAAKAAAGGIRSMVGFTYRR 140 (390)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCCEEEECGGGG
T ss_pred cchhHHHHHHHHHHHHHhcCCceEEEeeecc
Confidence 344444443 33 35677777777443
No 258
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=55.14 E-value=35 Score=28.52 Aligned_cols=83 Identities=16% Similarity=0.114 Sum_probs=51.7
Q ss_pred ChHHHHHHHHhCC----CeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHH
Q 024671 1 MGKAVIKAADAAG----LELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAE 76 (264)
Q Consensus 1 MG~~i~~~~~~~~----~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~ 76 (264)
||+.+++.+.+.| +++. .+++.+.. .++.+. .+.++++. .+| +||=...|..+.+.++
T Consensus 15 mG~~~a~~l~~~g~~~~~~v~-~~~~~~~~---------~g~~~~--~~~~~~~~-----~~D-~vi~~v~~~~~~~v~~ 76 (262)
T 2rcy_A 15 MGSALAHGIANANIIKKENLF-YYGPSKKN---------TTLNYM--SSNEELAR-----HCD-IIVCAVKPDIAGSVLN 76 (262)
T ss_dssp HHHHHHHHHHHHTSSCGGGEE-EECSSCCS---------SSSEEC--SCHHHHHH-----HCS-EEEECSCTTTHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCeEE-EEeCCccc---------CceEEe--CCHHHHHh-----cCC-EEEEEeCHHHHHHHHH
Confidence 7899998887666 5665 34543321 123332 34444443 478 6777777888887776
Q ss_pred HHHh--cCCCeEEecCCCCHHHHHHHH
Q 024671 77 LYSK--VGVPFVMGTTGGDRVRLHETI 101 (264)
Q Consensus 77 ~~~~--~g~plViGTTG~~~~~~~~l~ 101 (264)
.... .+..+|+-++|++.+.++++.
T Consensus 77 ~l~~~l~~~~vv~~~~gi~~~~l~~~~ 103 (262)
T 2rcy_A 77 NIKPYLSSKLLISICGGLNIGKLEEMV 103 (262)
T ss_dssp HSGGGCTTCEEEECCSSCCHHHHHHHH
T ss_pred HHHHhcCCCEEEEECCCCCHHHHHHHh
Confidence 5543 245688888999887666653
No 259
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=55.09 E-value=41 Score=28.25 Aligned_cols=73 Identities=10% Similarity=0.091 Sum_probs=46.9
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++....+... .+++..+.+.....+ .+..|.|.++.+.+.++.+
T Consensus 16 IG~aia~~l~~~G~~vv~~~~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 76 (258)
T 3oid_A 16 VGKAAAIRLAENGYNIVINYARSKK-------------------AALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQI 76 (258)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHH-------------------HHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCHH-------------------HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4889998888889988754333211 112222222222223 3457999999999999888
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 77 ~~~~g~id~lv~nAg~ 92 (258)
T 3oid_A 77 DETFGRLDVFVNNAAS 92 (258)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 764 67888877774
No 260
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=54.99 E-value=23 Score=31.54 Aligned_cols=42 Identities=5% Similarity=-0.119 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHHhcCCCeEEecCCCCHHHHHHHHHccCCcEE
Q 024671 68 PAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSNVYAV 109 (264)
Q Consensus 68 p~~~~~~~~~~~~~g~plViGTTG~~~~~~~~l~~~~~~~~v 109 (264)
|..+.+.++.+.+.+++.|.--+.++..-.+.|++..+++++
T Consensus 225 ~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~e~g~~v~ 266 (312)
T 2o1e_A 225 AASLAKLKTYAKEHNVKVIYFEEIASSKVADTLASEIGAKTE 266 (312)
T ss_dssp HHHHHHHHHHTTSSCCCEEECSSCCCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHhCCcEE
Confidence 455666666666666666666666666555666665555554
No 261
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=54.94 E-value=25 Score=31.79 Aligned_cols=83 Identities=19% Similarity=0.148 Sum_probs=49.6
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCCcccccccc------------ccCceeEeecCCchhhHHhhhhcCCCCEEEEECCC
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVE------------VCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTV 67 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~~~~g~~~~------------~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~ 67 (264)
+|+.+++.+. .++++|++..++. ...|+.+. ..+..+.+... +.+ .+ ..+| +|+.-+-
T Consensus 16 iG~~llr~L~~~p~~elvai~~s~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~----~~--~~vD-vVf~atp 86 (350)
T 2ep5_A 16 VGQKMVKMLAKHPYLELVKVSASP-SKIGKKYKDAVKWIEQGDIPEEVQDLPIVST-NYE----DH--KDVD-VVLSALP 86 (350)
T ss_dssp HHHHHHHHHTTCSSEEEEEEECCG-GGTTSBHHHHCCCCSSSSCCHHHHTCBEECS-SGG----GG--TTCS-EEEECCC
T ss_pred HHHHHHHHHHhCCCcEEEEEecCh-hhcCCCHHHhcCcccccccccCCceeEEeeC-CHH----Hh--cCCC-EEEECCC
Confidence 4899999887 5889999865321 12222210 00112223211 221 12 2578 6775555
Q ss_pred hHHHHHHHHHHHhcCCCeEEecCCC
Q 024671 68 PAAVNGNAELYSKVGVPFVMGTTGG 92 (264)
Q Consensus 68 p~~~~~~~~~~~~~g~plViGTTG~ 92 (264)
.....+.++.+.+.|+++|..+.-|
T Consensus 87 ~~~s~~~a~~~~~aG~~VId~s~~~ 111 (350)
T 2ep5_A 87 NELAESIELELVKNGKIVVSNASPF 111 (350)
T ss_dssp HHHHHHHHHHHHHTTCEEEECSSTT
T ss_pred hHHHHHHHHHHHHCCCEEEECCccc
Confidence 5778999999999999988877644
No 262
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=54.92 E-value=58 Score=23.65 Aligned_cols=73 Identities=11% Similarity=0.129 Sum_probs=37.4
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHhc--CCCeEEecCCCCHHHHHHHHHccCCcEEEccchhH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~~--g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSl 116 (264)
.+.++++..+....||.|++|+..|. .-.+.++...+. ..|+|+-|+--+.+......+..+.--++.-.++.
T Consensus 31 ~~~~~a~~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~~s~~~~~~~~~~~~~~~ga~~~l~KP~~~ 106 (139)
T 2jk1_A 31 QGAEAAIAILEEEWVQVIICDQRMPGRTGVDFLTEVRERWPETVRIIITGYTDSASMMAAINDAGIHQFLTKPWHP 106 (139)
T ss_dssp SSHHHHHHHHHHSCEEEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEEESCTTCHHHHHHHHHTTCCEEEESSCCH
T ss_pred CCHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCcEEEEeCCCChHHHHHHHHhhchhhhccCCCCH
Confidence 34455555555557898899999884 234445554443 45666654433333333333333332233333444
No 263
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=54.69 E-value=35 Score=29.09 Aligned_cols=72 Identities=13% Similarity=0.141 Sum_probs=46.8
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++.. ++.. +.+++..+.+.....+ .+..|+|.++.+...++.+
T Consensus 36 IG~aia~~la~~G~~V~~~-~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 95 (279)
T 3sju_A 36 IGLAVARTLAARGIAVYGC-ARDA-------------------KNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAA 95 (279)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCH-------------------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 4888888888888887643 3221 1122222222222223 3457999999999999887
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 96 ~~~~g~id~lv~nAg~ 111 (279)
T 3sju_A 96 VERFGPIGILVNSAGR 111 (279)
T ss_dssp HHHHCSCCEEEECCCC
T ss_pred HHHcCCCcEEEECCCC
Confidence 765 68899988885
No 264
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=54.63 E-value=14 Score=27.11 Aligned_cols=43 Identities=14% Similarity=0.190 Sum_probs=35.4
Q ss_pred EEECCChHHHHHHHHHHHhcCCCeEEecCCCCHHHHHHHHHcc
Q 024671 62 VVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENS 104 (264)
Q Consensus 62 vIDFS~p~~~~~~~~~~~~~g~plViGTTG~~~~~~~~l~~~~ 104 (264)
+---|+..-..+.++....+|+|+|+=..|-++.+..++...+
T Consensus 31 irtatssqdirdiiksmkdngkplvvfvngasqndvnefqnea 73 (112)
T 2lnd_A 31 IRTATSSQDIRDIIKSMKDNGKPLVVFVNGASQNDVNEFQNEA 73 (112)
T ss_dssp EEEECSHHHHHHHHHHHTTCCSCEEEEECSCCHHHHHHHHHHH
T ss_pred eeeccchhhHHHHHHHHHhcCCeEEEEecCcccccHHHHHHHH
Confidence 4556777889999999999999999999999988777765443
No 265
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=54.58 E-value=1e+02 Score=26.40 Aligned_cols=72 Identities=18% Similarity=0.113 Sum_probs=47.3
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.++|..++.. ++.. +.+++..+++.....+ .+..|+|.++.+.+.++.+
T Consensus 43 IG~~la~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 102 (301)
T 3tjr_A 43 IGLATATEFARRGARLVLS-DVDQ-------------------PALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEA 102 (301)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECCH-------------------HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence 3888888888888887753 3221 1122222222222222 3568999999999999888
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 103 ~~~~g~id~lvnnAg~ 118 (301)
T 3tjr_A 103 FRLLGGVDVVFSNAGI 118 (301)
T ss_dssp HHHHSSCSEEEECCCC
T ss_pred HHhCCCCCEEEECCCc
Confidence 765 78999988885
No 266
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=54.52 E-value=39 Score=28.03 Aligned_cols=74 Identities=12% Similarity=0.169 Sum_probs=47.2
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++....+.. +.+++..+.+.....+ .+..|.|.++.+...++.+
T Consensus 16 IG~~ia~~l~~~G~~V~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 76 (246)
T 3osu_A 16 IGRSIALQLAEEGYNVAVNYAGSK-------------------EKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEV 76 (246)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCH-------------------HHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCH-------------------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 488999888888998875322111 1112222222222233 3457999999999999887
Q ss_pred Hhc--CCCeEEecCCCC
Q 024671 79 SKV--GVPFVMGTTGGD 93 (264)
Q Consensus 79 ~~~--g~plViGTTG~~ 93 (264)
.+. ++.+|+-..|..
T Consensus 77 ~~~~g~id~lv~nAg~~ 93 (246)
T 3osu_A 77 VSQFGSLDVLVNNAGIT 93 (246)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 765 788999888853
No 267
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=54.49 E-value=60 Score=27.64 Aligned_cols=57 Identities=9% Similarity=0.082 Sum_probs=40.1
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCC-eEEecCCCCHHHHHHHH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVP-FVMGTTGGDRVRLHETI 101 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~p-lViGTTG~~~~~~~~l~ 101 (264)
.|....+..+....|| +|+=++.+..+...++.+.+.|+. .++++.||+..++..+.
T Consensus 177 ~~~~~~~~~l~~~~~d-av~~~~~~~~a~~~~~~~~~~g~~~p~i~~~g~~~~~~~~~~ 234 (362)
T 3snr_A 177 TSVAGQALKLVAANPD-AILVGASGTAAALPQTTLRERGYNGLIYQTHGAASMDFIRIA 234 (362)
T ss_dssp SCCHHHHHHHHHHCCS-EEEEECCHHHHHHHHHHHHHTTCCSEEEECGGGCSHHHHHHH
T ss_pred CCHHHHHHHHHhcCCC-EEEEecCcchHHHHHHHHHHcCCCccEEeccCcCcHHHHHHh
Confidence 3455555555556799 567677788888999999998753 34888899766554443
No 268
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=54.43 E-value=21 Score=31.39 Aligned_cols=23 Identities=22% Similarity=0.274 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHh-cCCC--eEEecCC
Q 024671 69 AAVNGNAELYSK-VGVP--FVMGTTG 91 (264)
Q Consensus 69 ~~~~~~~~~~~~-~g~p--lViGTTG 91 (264)
+++..++++.++ .|+. +|.||||
T Consensus 24 ~~l~~lv~~li~~~Gv~gl~~~GttG 49 (293)
T 1f6k_A 24 KGLRQIIRHNIDKMKVDGLYVGGSTG 49 (293)
T ss_dssp HHHHHHHHHHHHTSCCSEEEESSGGG
T ss_pred HHHHHHHHHHHhhCCCcEEEeCcccc
Confidence 445555555555 5554 2345555
No 269
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=54.42 E-value=28 Score=30.51 Aligned_cols=49 Identities=6% Similarity=-0.004 Sum_probs=36.1
Q ss_pred ChHHHHHHHHHHHhcCCCeEEecCCCCHHHHHHHHHccCCcEEEccchh
Q 024671 67 VPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMG 115 (264)
Q Consensus 67 ~p~~~~~~~~~~~~~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfS 115 (264)
+|..+.+.++.+.+.+++.|.--+.+++.-.+.|++..+++++..-+++
T Consensus 222 s~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~~g~~v~~ld~l~ 270 (291)
T 1pq4_A 222 SAQELKQLIDTAKENNLTMVFGETQFSTKSSEAIAAEIGAGVELLDPLA 270 (291)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEETTSCCHHHHHHHHHHTCEEEEECTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHcCCeEEEEcCch
Confidence 4677778888888888888888888877777777777777776554443
No 270
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=54.39 E-value=58 Score=23.48 Aligned_cols=73 Identities=14% Similarity=0.184 Sum_probs=36.7
Q ss_pred CCchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHh---c---CCCeEEecCCCCHHH-HHHHHHccCCcEEEccch
Q 024671 43 LSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK---V---GVPFVMGTTGGDRVR-LHETIENSNVYAVISPQM 114 (264)
Q Consensus 43 ~~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~---~---g~plViGTTG~~~~~-~~~l~~~~~~~~v~s~Nf 114 (264)
..+.++++..+... +|.|++|...|.. -.+.++...+ . ..|.|+-.|+....+ ..... ..+.--++.-.+
T Consensus 37 ~~~~~~a~~~~~~~-~dlvllD~~lp~~~g~~~~~~l~~~~~~~~~~~~~ii~~s~~~~~~~~~~~~-~~ga~~~l~KP~ 114 (136)
T 1dcf_A 37 VSSNEECLRVVSHE-HKVVFMDVCMPGVENYQIALRIHEKFTKQRHQRPLLVALSGNTDKSTKEKCM-SFGLDGVLLKPV 114 (136)
T ss_dssp ESSHHHHHHHCCTT-CSEEEEECCSSTTTTTHHHHHHHHHHC-CCSCCCEEEEEESCCSHHHHHHHH-HTTCCEEEESSC
T ss_pred eCCHHHHHHHHhcc-CCEEEEeCCCCCCcHHHHHHHHHHhhhhccCCCceEEEEeCCCCHHHHHHHH-HcCCCeEEECCC
Confidence 34555666554433 4888999998852 1233333321 1 456566566665433 33332 345333344345
Q ss_pred hHH
Q 024671 115 GKQ 117 (264)
Q Consensus 115 SlG 117 (264)
+..
T Consensus 115 ~~~ 117 (136)
T 1dcf_A 115 SLD 117 (136)
T ss_dssp CHH
T ss_pred CHH
Confidence 553
No 271
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=54.19 E-value=58 Score=29.80 Aligned_cols=81 Identities=15% Similarity=0.123 Sum_probs=50.7
Q ss_pred hHHHHHHHHhC---CCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 2 GKAVIKAADAA---GLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 2 G~~i~~~~~~~---~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
|+++++.+.++ ..+|..... ....|+.+...+..+.+...+ . +.+ ..+| +++..+-.....+.+..+
T Consensus 15 G~eLlrlL~~~~~p~~el~~~as--~~saG~~~~~~~~~~~~~~~~-~----~~~--~~~D-vvf~a~~~~~s~~~a~~~ 84 (366)
T 3pwk_A 15 GAQMIKMLEESTLPIDKIRYLAS--ARSAGKSLKFKDQDITIEETT-E----TAF--EGVD-IALFSAGSSTSAKYAPYA 84 (366)
T ss_dssp HHHHHHHHHTCCCCEEEEEEEEC--TTTTTCEEEETTEEEEEEECC-T----TTT--TTCS-EEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEEEEEc--cccCCCcceecCCCceEeeCC-H----HHh--cCCC-EEEECCChHhHHHHHHHH
Confidence 88999988754 445654322 224455543333334443211 1 111 2578 788888778889999999
Q ss_pred HhcCCCeEEecCCC
Q 024671 79 SKVGVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~g~plViGTTG~ 92 (264)
.+.|+.+|.-++-|
T Consensus 85 ~~~G~~vIDlSa~~ 98 (366)
T 3pwk_A 85 VKAGVVVVDNTSYF 98 (366)
T ss_dssp HHTTCEEEECSSTT
T ss_pred HHCCCEEEEcCCcc
Confidence 99999888877655
No 272
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=53.95 E-value=47 Score=28.35 Aligned_cols=84 Identities=15% Similarity=0.055 Sum_probs=43.6
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHH---HH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNA---EL 77 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~---~~ 77 (264)
||+.+++.+.+.|+++.. .++.+... +. ....++.. ..++++++. .+|+|++=...|..+.+.+ +.
T Consensus 12 mG~~~a~~l~~~G~~V~~-~dr~~~~~-~~--~~~~g~~~--~~~~~~~~~-----~aDvvi~~vp~~~~~~~v~~~~~~ 80 (287)
T 3pef_A 12 MGSAMAKNLVKAGCSVTI-WNRSPEKA-EE--LAALGAER--AATPCEVVE-----SCPVTFAMLADPAAAEEVCFGKHG 80 (287)
T ss_dssp HHHHHHHHHHHTTCEEEE-ECSSGGGG-HH--HHHTTCEE--CSSHHHHHH-----HCSEEEECCSSHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHCCCeEEE-EcCCHHHH-HH--HHHCCCee--cCCHHHHHh-----cCCEEEEEcCCHHHHHHHHcCcch
Confidence 799999888888999874 45443211 11 11112333 245555543 3784333333366776666 32
Q ss_pred H---HhcCCCeEEecCCCCHHH
Q 024671 78 Y---SKVGVPFVMGTTGGDRVR 96 (264)
Q Consensus 78 ~---~~~g~plViGTTG~~~~~ 96 (264)
. .+.+. +|+-+++.+...
T Consensus 81 l~~~l~~~~-~vi~~st~~~~~ 101 (287)
T 3pef_A 81 VLEGIGEGR-GYVDMSTVDPAT 101 (287)
T ss_dssp HHHHCCTTC-EEEECSCCCHHH
T ss_pred HhhcCCCCC-EEEeCCCCCHHH
Confidence 2 23444 444445555443
No 273
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=53.85 E-value=18 Score=31.86 Aligned_cols=23 Identities=30% Similarity=0.268 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHhcCCC--eEEecCC
Q 024671 69 AAVNGNAELYSKVGVP--FVMGTTG 91 (264)
Q Consensus 69 ~~~~~~~~~~~~~g~p--lViGTTG 91 (264)
+++..++++.++.|+. +|.||||
T Consensus 22 ~~l~~lv~~li~~Gv~gl~~~GttG 46 (291)
T 3a5f_A 22 DKLSELIEWHIKSKTDAIIVCGTTG 46 (291)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGG
T ss_pred HHHHHHHHHHHHcCCCEEEECcccc
Confidence 4556666666666654 2446666
No 274
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=53.56 E-value=9.3 Score=33.56 Aligned_cols=37 Identities=14% Similarity=0.196 Sum_probs=32.2
Q ss_pred EEECCChHHHHHHHHHHHhcCCCeEEecCCCCHHHHHH
Q 024671 62 VVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHE 99 (264)
Q Consensus 62 vIDFS~p~~~~~~~~~~~~~g~plViGTTG~~~~~~~~ 99 (264)
+||||.++...+..++|.+.|.=.|++. |.+.+.+++
T Consensus 6 vIDls~~~~~~~l~~A~~~~GFF~v~nH-Gi~~~li~~ 42 (280)
T 3on7_A 6 TIDYRAADSAKRFVESLRETGFGVLSNH-PIDKELVER 42 (280)
T ss_dssp EEETTSTTHHHHHHHHHHHHSEEEEESC-SSCHHHHHH
T ss_pred EEECCChhHHHHHHHHHHhCCEEEEECC-CCCHHHHHH
Confidence 7999999999999999999999999986 888765544
No 275
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=53.08 E-value=18 Score=32.22 Aligned_cols=23 Identities=17% Similarity=0.274 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHhcCCC--eEEecCC
Q 024671 69 AAVNGNAELYSKVGVP--FVMGTTG 91 (264)
Q Consensus 69 ~~~~~~~~~~~~~g~p--lViGTTG 91 (264)
+++..++++.++.|+. +|.||||
T Consensus 35 ~~l~~lv~~li~~Gv~Gl~v~GtTG 59 (307)
T 3s5o_A 35 GKLEENLHKLGTFPFRGFVVQGSNG 59 (307)
T ss_dssp HHHHHHHHHHTTSCCSEEEESSGGG
T ss_pred HHHHHHHHHHHHcCCCEEEECcccc
Confidence 3455555555555554 3455555
No 276
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=52.94 E-value=22 Score=32.06 Aligned_cols=31 Identities=19% Similarity=0.169 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHhcCCC--eEEecCC----CCHHHHHH
Q 024671 69 AAVNGNAELYSKVGVP--FVMGTTG----GDRVRLHE 99 (264)
Q Consensus 69 ~~~~~~~~~~~~~g~p--lViGTTG----~~~~~~~~ 99 (264)
+++..++++.++.|+. +|.|||| ++.+|..+
T Consensus 55 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~ 91 (332)
T 2r8w_A 55 EAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRR 91 (332)
T ss_dssp HHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHH
Confidence 5677777777777775 3457777 45555433
No 277
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=52.92 E-value=21 Score=32.34 Aligned_cols=23 Identities=26% Similarity=0.439 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHhcCCC--eEEecCC
Q 024671 69 AAVNGNAELYSKVGVP--FVMGTTG 91 (264)
Q Consensus 69 ~~~~~~~~~~~~~g~p--lViGTTG 91 (264)
+++..++++.++.|+. +|.||||
T Consensus 52 ~~l~~lv~~li~~Gv~Gl~v~GtTG 76 (343)
T 2v9d_A 52 PGTAALIDDLIKAGVDGLFFLGSGG 76 (343)
T ss_dssp HHHHHHHHHHHHTTCSCEEESSTTT
T ss_pred HHHHHHHHHHHHcCCCEEEeCcccc
Confidence 4455555555555553 2345555
No 278
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=52.91 E-value=54 Score=27.27 Aligned_cols=41 Identities=20% Similarity=0.463 Sum_probs=30.1
Q ss_pred HhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEecC
Q 024671 50 LASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT 90 (264)
Q Consensus 50 l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGTT 90 (264)
+..+....+|.++|--+.++...+.++.+.+.|+|+|.--+
T Consensus 62 i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~ 102 (304)
T 3gbv_A 62 SQAVIEEQPDGVMFAPTVPQYTKGFTDALNELGIPYIYIDS 102 (304)
T ss_dssp HHHHHTTCCSEEEECCSSGGGTHHHHHHHHHHTCCEEEESS
T ss_pred HHHHHhcCCCEEEECCCChHHHHHHHHHHHHCCCeEEEEeC
Confidence 44445567896666666676778888999999999987543
No 279
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=52.74 E-value=22 Score=31.44 Aligned_cols=13 Identities=15% Similarity=0.240 Sum_probs=6.8
Q ss_pred CCCeEEecCCCCH
Q 024671 82 GVPFVMGTTGGDR 94 (264)
Q Consensus 82 g~plViGTTG~~~ 94 (264)
++|+++||.+.+.
T Consensus 77 rvpviaGvg~~~t 89 (301)
T 3m5v_A 77 KVKVLAGAGSNAT 89 (301)
T ss_dssp SCEEEEECCCSSH
T ss_pred CCeEEEeCCCCCH
Confidence 4555555555443
No 280
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=52.42 E-value=10 Score=34.60 Aligned_cols=36 Identities=11% Similarity=-0.063 Sum_probs=29.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHhcCCCeEEecCCCC
Q 024671 57 YPNMIVVDYT-VPAAVNGNAELYSKVGVPFVMGTTGGD 93 (264)
Q Consensus 57 ~~d~VvIDFS-~p~~~~~~~~~~~~~g~plViGTTG~~ 93 (264)
.+| +|||-+ ++++-...-+.|.++++|+|.+..||+
T Consensus 139 ~~D-lVvd~tDn~~tR~lin~~c~~~~~plI~aa~G~~ 175 (340)
T 3rui_A 139 EHD-IIFLLVDSRESRWLPSLLSNIENKTVINAALGFD 175 (340)
T ss_dssp HCS-EEEECCSSTGGGHHHHHHHHHTTCEEEEEEECSS
T ss_pred cCC-EEEecCCCHHHHHHHHHHHHHcCCcEEEeeecce
Confidence 478 799988 666666777889999999999988874
No 281
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=52.22 E-value=20 Score=31.60 Aligned_cols=23 Identities=22% Similarity=0.309 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHhcCCC--eEEecCC
Q 024671 69 AAVNGNAELYSKVGVP--FVMGTTG 91 (264)
Q Consensus 69 ~~~~~~~~~~~~~g~p--lViGTTG 91 (264)
+++..++++.++.|+. +|.||||
T Consensus 23 ~~l~~lv~~li~~Gv~gl~v~GttG 47 (292)
T 3daq_A 23 EALKAHVNFLLENNAQAIIVNGTTA 47 (292)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGG
T ss_pred HHHHHHHHHHHHcCCCEEEECcccc
Confidence 4455555555555543 3335555
No 282
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=52.06 E-value=56 Score=27.54 Aligned_cols=72 Identities=21% Similarity=0.158 Sum_probs=47.9
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
+|+.+++...+.|..++.. ++.. +.+++...++ ......+..|.|.++.+.+.++.+.+
T Consensus 23 IG~aia~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (271)
T 3tzq_B 23 IGLETSRVLARAGARVVLA-DLPE-------------------TDLAGAAASV-GRGAVHHVVDLTNEVSVRALIDFTID 81 (271)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ECTT-------------------SCHHHHHHHH-CTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-cCCH-------------------HHHHHHHHHh-CCCeEEEECCCCCHHHHHHHHHHHHH
Confidence 4889998888889887743 3221 1222222222 11233457899999999999988776
Q ss_pred c--CCCeEEecCCCC
Q 024671 81 V--GVPFVMGTTGGD 93 (264)
Q Consensus 81 ~--g~plViGTTG~~ 93 (264)
. ++.+|+-..|..
T Consensus 82 ~~g~id~lv~nAg~~ 96 (271)
T 3tzq_B 82 TFGRLDIVDNNAAHS 96 (271)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 5 788999887754
No 283
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=51.99 E-value=43 Score=27.44 Aligned_cols=18 Identities=33% Similarity=0.421 Sum_probs=13.0
Q ss_pred ChHHHHHHHHhCCCeEEE
Q 024671 1 MGKAVIKAADAAGLELVP 18 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~ 18 (264)
||+.+++.+.+.|+++..
T Consensus 30 mG~~la~~l~~~g~~V~~ 47 (209)
T 2raf_A 30 MGQAIGHNFEIAGHEVTY 47 (209)
T ss_dssp HHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHCCCEEEE
Confidence 677887777777777663
No 284
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=51.88 E-value=26 Score=32.05 Aligned_cols=85 Identities=19% Similarity=0.223 Sum_probs=48.4
Q ss_pred ChHHHHHHHH-hCCCeEEEEEc-CCCc-----------cccc----------cccccCceeEeecCCchhhHHhhhhcCC
Q 024671 1 MGKAVIKAAD-AAGLELVPVSF-GTEE-----------ESGQ----------KVEVCGKEIQVHGLSDRESVLASVFDKY 57 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~-~~~~-----------~~g~----------~~~~~~~~i~i~~~~dl~~~l~~~~~~~ 57 (264)
.|+.+.+++. .+++||++..+ .... ..|+ .+.+.+..+.+....|.++. . ..+..
T Consensus 28 iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~i-~-w~~~~ 105 (354)
T 3cps_A 28 IGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCINGKVVKVFQAKDPAEI-P-WGASG 105 (354)
T ss_dssp HHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEETTEEEEEECCSCGGGC-C-HHHHT
T ss_pred HHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEECCeEEEEEecCChHHC-C-cccCC
Confidence 3899999987 57999998765 2211 0010 01112223445433343321 0 00125
Q ss_pred CCEEEEECCChHHHHHHHHHHHhcCCC-eEEe
Q 024671 58 PNMIVVDYTVPAAVNGNAELYSKVGVP-FVMG 88 (264)
Q Consensus 58 ~d~VvIDFS~p~~~~~~~~~~~~~g~p-lViG 88 (264)
+| +|++-|-.....+..+..++.|.+ +||=
T Consensus 106 vD-vV~eatg~~~s~e~a~~~l~~GakkvVId 136 (354)
T 3cps_A 106 AQ-IVCESTGVFTTEEKASLHLKGGAKKVIIS 136 (354)
T ss_dssp CC-EEEECSSSCCSHHHHGGGGTTTCSEEEES
T ss_pred CC-EEEECCCchhhHHHHHHHHHcCCcEEEEe
Confidence 78 789877777777888888888874 4443
No 285
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=51.75 E-value=42 Score=27.32 Aligned_cols=73 Identities=15% Similarity=0.144 Sum_probs=45.7
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--E-EEEECCChHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--M-IVVDYTVPAAVNGNAEL 77 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~-VvIDFS~p~~~~~~~~~ 77 (264)
+|+.+++.+.+.|.+++....+... .+++..+.+.....+ . +..|.+.++.+.+.++.
T Consensus 13 iG~~~a~~l~~~G~~v~~~~~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 73 (245)
T 2ph3_A 13 IGRAIALRLAEDGFALAIHYGQNRE-------------------KAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQ 73 (245)
T ss_dssp HHHHHHHHHHTTTCEEEEEESSCHH-------------------HHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCHH-------------------HHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHH
Confidence 4889999888889988754333221 111111111111222 2 34599999999988887
Q ss_pred HHhc--CCCeEEecCCC
Q 024671 78 YSKV--GVPFVMGTTGG 92 (264)
Q Consensus 78 ~~~~--g~plViGTTG~ 92 (264)
+.+. ++.+|+-..|.
T Consensus 74 ~~~~~~~~d~li~~Ag~ 90 (245)
T 2ph3_A 74 AAEVLGGLDTLVNNAGI 90 (245)
T ss_dssp HHHHHTCCCEEEECCCC
T ss_pred HHHhcCCCCEEEECCCC
Confidence 7653 78899988885
No 286
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=51.72 E-value=20 Score=31.84 Aligned_cols=13 Identities=15% Similarity=0.516 Sum_probs=7.8
Q ss_pred CCCeEEecCCCCH
Q 024671 82 GVPFVMGTTGGDR 94 (264)
Q Consensus 82 g~plViGTTG~~~ 94 (264)
++|+++||.+.+.
T Consensus 81 rvpViaGvg~~st 93 (306)
T 1o5k_A 81 KIPVIVGAGTNST 93 (306)
T ss_dssp SSCEEEECCCSCH
T ss_pred CCeEEEcCCCccH
Confidence 4666666666553
No 287
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=51.45 E-value=13 Score=32.85 Aligned_cols=34 Identities=26% Similarity=0.383 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhcCCC--eEEecCC----CCHHHHHHHHH
Q 024671 69 AAVNGNAELYSKVGVP--FVMGTTG----GDRVRLHETIE 102 (264)
Q Consensus 69 ~~~~~~~~~~~~~g~p--lViGTTG----~~~~~~~~l~~ 102 (264)
+++..++++.++.|+. +|.|||| ++.+|..++.+
T Consensus 20 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~ 59 (288)
T 2nuw_A 20 DALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLN 59 (288)
T ss_dssp HHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHH
Confidence 6788899999999986 4569999 46666555433
No 288
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=51.06 E-value=13 Score=32.70 Aligned_cols=31 Identities=29% Similarity=0.302 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHhcCCC--eEEecCC----CCHHHHHH
Q 024671 69 AAVNGNAELYSKVGVP--FVMGTTG----GDRVRLHE 99 (264)
Q Consensus 69 ~~~~~~~~~~~~~g~p--lViGTTG----~~~~~~~~ 99 (264)
+++..++++.++.|+. +|.|||| ++.+|..+
T Consensus 19 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~ 55 (286)
T 2r91_A 19 ELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKME 55 (286)
T ss_dssp HHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHH
Confidence 5566677777777765 3457777 34444433
No 289
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=51.06 E-value=16 Score=32.67 Aligned_cols=12 Identities=33% Similarity=0.562 Sum_probs=5.8
Q ss_pred CCCeEEecCCCC
Q 024671 82 GVPFVMGTTGGD 93 (264)
Q Consensus 82 g~plViGTTG~~ 93 (264)
++|+++||.+.+
T Consensus 91 rvpViaGvg~~s 102 (315)
T 3si9_A 91 RVPVVAGAGSNS 102 (315)
T ss_dssp SSCBEEECCCSS
T ss_pred CCcEEEeCCCCC
Confidence 345555554444
No 290
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=50.93 E-value=14 Score=33.07 Aligned_cols=23 Identities=30% Similarity=0.372 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHhcCCC--eEEecCC
Q 024671 69 AAVNGNAELYSKVGVP--FVMGTTG 91 (264)
Q Consensus 69 ~~~~~~~~~~~~~g~p--lViGTTG 91 (264)
+++..++++.++.|+. +|.||||
T Consensus 45 ~~l~~lv~~li~~Gv~Gi~v~GtTG 69 (315)
T 3na8_A 45 PALGRSIERLIDGGVHAIAPLGSTG 69 (315)
T ss_dssp HHHHHHHHHHHHTTCSEEECSSGGG
T ss_pred HHHHHHHHHHHHcCCCEEEECcccc
Confidence 4555555555555554 3455555
No 291
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=50.88 E-value=47 Score=31.16 Aligned_cols=108 Identities=17% Similarity=0.171 Sum_probs=55.6
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCcccccccc-c-cCceeEeecCCchhhHHhhhhcCCCCEEEEECCCh-HHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVE-V-CGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVP-AAVNGNAEL 77 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~-~-~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p-~~~~~~~~~ 77 (264)
||+.++..+.+.|+++. +.++.+.....-.. . .+.++.. ..+++++++++ ..+| +||=...+ ..+.+.++.
T Consensus 13 mG~~lA~~La~~G~~V~-v~dr~~~~~~~l~~~~~~g~gi~~--~~~~~e~v~~l--~~aD-vVilaVp~~~~v~~vl~~ 86 (482)
T 2pgd_A 13 MGQNLILNMNDHGFVVC-AFNRTVSKVDDFLANEAKGTKVLG--AHSLEEMVSKL--KKPR-RIILLVKAGQAVDNFIEK 86 (482)
T ss_dssp HHHHHHHHHHHTTCCEE-EECSSTHHHHHHHHTTTTTSSCEE--CSSHHHHHHHB--CSSC-EEEECSCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEE-EEeCCHHHHHHHHhccccCCCeEE--eCCHHHHHhhc--cCCC-EEEEeCCChHHHHHHHHH
Confidence 89999988888898875 34543321100000 0 0123333 34665554322 2578 45544443 466766654
Q ss_pred HH---hcCCCeEEecCCCCHH--HHHHHHHccCCcEEEccch
Q 024671 78 YS---KVGVPFVMGTTGGDRV--RLHETIENSNVYAVISPQM 114 (264)
Q Consensus 78 ~~---~~g~plViGTTG~~~~--~~~~l~~~~~~~~v~s~Nf 114 (264)
.. +.+..+|.++||...+ .+.+.....++.++-+|++
T Consensus 87 l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~ 128 (482)
T 2pgd_A 87 LVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVS 128 (482)
T ss_dssp HHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCC
Confidence 43 3466677788887542 3433333334444444543
No 292
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=50.73 E-value=79 Score=29.13 Aligned_cols=117 Identities=10% Similarity=0.010 Sum_probs=68.0
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeE-eecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQ-VHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~-i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (264)
+|+.+++.+.+.|++++. ++..+..+ +.+ ...+++ +++...-.++|....-..+|.||+-...++.....+..+.
T Consensus 15 ~G~~va~~L~~~g~~vvv-Id~d~~~v-~~~--~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~n~~i~~~ar 90 (413)
T 3l9w_A 15 FGQITGRLLLSSGVKMVV-LDHDPDHI-ETL--RKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVK 90 (413)
T ss_dssp HHHHHHHHHHHTTCCEEE-EECCHHHH-HHH--HHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEE-EECCHHHH-HHH--HhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHHHHHHHHHHH
Confidence 489999988888999885 45433211 000 001121 1111112234544333467866777778888888888888
Q ss_pred hcCCC--eEEecCCCCHHHHHHHHHccCCcEEEccchhHHHHHHHHH
Q 024671 80 KVGVP--FVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLAA 124 (264)
Q Consensus 80 ~~g~p--lViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlGv~ll~~~ 124 (264)
+.+.. +|+=+ .+.++...+.+ .++-.|+.|++--+..+..++
T Consensus 91 ~~~p~~~Iiara--~~~~~~~~L~~-~Gad~Vi~~~~~~a~~la~~~ 134 (413)
T 3l9w_A 91 EHFPHLQIIARA--RDVDHYIRLRQ-AGVEKPERETFEGALKTGRLA 134 (413)
T ss_dssp HHCTTCEEEEEE--SSHHHHHHHHH-TTCSSCEETTHHHHHHHHHHH
T ss_pred HhCCCCeEEEEE--CCHHHHHHHHH-CCCCEEECccHHHHHHHHHHH
Confidence 87654 44433 34566666654 466668888887766544443
No 293
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=50.51 E-value=53 Score=28.77 Aligned_cols=81 Identities=16% Similarity=0.100 Sum_probs=41.8
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHH---H
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAE---L 77 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~---~ 77 (264)
||+.+++.+.+.|+++.. .++.+... + .....++... .++++++. .+|+|++=-..|..+...+. .
T Consensus 42 mG~~~a~~l~~~G~~V~~-~dr~~~~~-~--~l~~~g~~~~--~~~~e~~~-----~aDvVi~~vp~~~~~~~v~~~~~~ 110 (320)
T 4dll_A 42 MGLPMARRLCEAGYALQV-WNRTPARA-A--SLAALGATIH--EQARAAAR-----DADIVVSMLENGAVVQDVLFAQGV 110 (320)
T ss_dssp THHHHHHHHHHTTCEEEE-ECSCHHHH-H--HHHTTTCEEE--SSHHHHHT-----TCSEEEECCSSHHHHHHHHTTTCH
T ss_pred HHHHHHHHHHhCCCeEEE-EcCCHHHH-H--HHHHCCCEee--CCHHHHHh-----cCCEEEEECCCHHHHHHHHcchhH
Confidence 899999988888999774 45433211 0 1111133332 35555443 57844444444566666553 2
Q ss_pred H--HhcCCCeEEecCCC
Q 024671 78 Y--SKVGVPFVMGTTGG 92 (264)
Q Consensus 78 ~--~~~g~plViGTTG~ 92 (264)
. ...+..+|..+|+.
T Consensus 111 ~~~l~~~~~vi~~st~~ 127 (320)
T 4dll_A 111 AAAMKPGSLFLDMASIT 127 (320)
T ss_dssp HHHCCTTCEEEECSCCC
T ss_pred HhhCCCCCEEEecCCCC
Confidence 2 23444455555543
No 294
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=50.49 E-value=27 Score=29.96 Aligned_cols=22 Identities=18% Similarity=0.188 Sum_probs=17.1
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCC
Q 024671 1 MGKAVIKAADAAGLELVPVSFGT 23 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~ 23 (264)
||+.+++.+.+.|+++.. .++.
T Consensus 12 mG~~~a~~l~~~G~~V~~-~dr~ 33 (287)
T 3pdu_A 12 MGGPMAANLVRAGFDVTV-WNRN 33 (287)
T ss_dssp THHHHHHHHHHHTCCEEE-ECSS
T ss_pred HHHHHHHHHHHCCCeEEE-EcCC
Confidence 899999988877888774 4544
No 295
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=50.48 E-value=54 Score=27.08 Aligned_cols=71 Identities=17% Similarity=0.067 Sum_probs=45.5
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
+|+.+++.+.+.|.+++.. ++.. +.+++...++ ......+..|++.++.+.+.++.+.+
T Consensus 24 iG~~~a~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (265)
T 2o23_A 24 LGLATAERLVGQGASAVLL-DLPN-------------------SGGEAQAKKL-GNNCVFAPADVTSEKDVQTALALAKG 82 (265)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ECTT-------------------SSHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCc-------------------HhHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 4888888888888887753 3221 1122222221 11223356799999999988887765
Q ss_pred c--CCCeEEecCCC
Q 024671 81 V--GVPFVMGTTGG 92 (264)
Q Consensus 81 ~--g~plViGTTG~ 92 (264)
. ++.+||-..|.
T Consensus 83 ~~g~id~li~~Ag~ 96 (265)
T 2o23_A 83 KFGRVDVAVNCAGI 96 (265)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HCCCCCEEEECCcc
Confidence 4 78899988875
No 296
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=50.47 E-value=42 Score=28.17 Aligned_cols=73 Identities=19% Similarity=0.189 Sum_probs=45.7
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCC--CCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKY--PNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~--~d~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++...+.|..++....+... .+++..+.+.... ...+..|.|.++.+...++.+
T Consensus 20 IG~aia~~la~~G~~V~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (259)
T 3edm_A 20 IGRACAIRFAQEGANVVLTYNGAAE-------------------GAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAA 80 (259)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSCH-------------------HHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCHH-------------------HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 4888998888889888754332211 1111222222112 223567999999999999888
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+++-..|.
T Consensus 81 ~~~~g~id~lv~nAg~ 96 (259)
T 3edm_A 81 ADKFGEIHGLVHVAGG 96 (259)
T ss_dssp HHHHCSEEEEEECCCC
T ss_pred HHHhCCCCEEEECCCc
Confidence 775 67778766653
No 297
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=50.44 E-value=15 Score=32.50 Aligned_cols=31 Identities=32% Similarity=0.322 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHhcCCC--eEEecCC----CCHHHHHH
Q 024671 69 AAVNGNAELYSKVGVP--FVMGTTG----GDRVRLHE 99 (264)
Q Consensus 69 ~~~~~~~~~~~~~g~p--lViGTTG----~~~~~~~~ 99 (264)
+++..++++.++.|+. +|.|||| ++.+|..+
T Consensus 20 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~ 56 (293)
T 1w3i_A 20 EKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLE 56 (293)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHH
Confidence 5566666676676665 3457777 34444433
No 298
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=50.42 E-value=81 Score=27.13 Aligned_cols=80 Identities=11% Similarity=-0.010 Sum_probs=42.1
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
||+.+++.+.+.|+++.. .++.+.... .+ ...++.. ..+++++. . +|+|++=-..|..+.+.++...+
T Consensus 26 mG~~~A~~l~~~G~~V~~-~dr~~~~~~-~~--~~~g~~~--~~~~~~~~-----~-aDvvi~~vp~~~~~~~v~~~l~~ 93 (296)
T 3qha_A 26 MGAPMATRMTEWPGGVTV-YDIRIEAMT-PL--AEAGATL--ADSVADVA-----A-ADLIHITVLDDAQVREVVGELAG 93 (296)
T ss_dssp THHHHHHHHTTSTTCEEE-ECSSTTTSH-HH--HHTTCEE--CSSHHHHT-----T-SSEEEECCSSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCeEEE-EeCCHHHHH-HH--HHCCCEE--cCCHHHHH-----h-CCEEEEECCChHHHHHHHHHHHH
Confidence 899999888888998874 454332111 11 1112333 23544432 2 78444444446667766655544
Q ss_pred ---cCCCeEEecCCC
Q 024671 81 ---VGVPFVMGTTGG 92 (264)
Q Consensus 81 ---~g~plViGTTG~ 92 (264)
.+.-+|..+|..
T Consensus 94 ~l~~g~ivv~~st~~ 108 (296)
T 3qha_A 94 HAKPGTVIAIHSTIS 108 (296)
T ss_dssp TCCTTCEEEECSCCC
T ss_pred hcCCCCEEEEeCCCC
Confidence 344444445443
No 299
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=50.31 E-value=40 Score=31.61 Aligned_cols=88 Identities=16% Similarity=0.193 Sum_probs=47.9
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccc-cccCceeEeecCCchhhHHhhhhcCCCCEEEEECCCh-HHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKV-EVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVP-AAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~-~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p-~~~~~~~~~~ 78 (264)
||+.++..+.+.|+++. +.++.+....... ...+.++.. ..++++++..+ ..+| +||=...+ ..+.+.++..
T Consensus 16 mG~~lA~~L~~~G~~V~-v~dr~~~~~~~l~~~~~~~gi~~--~~s~~e~v~~l--~~aD-vVilavp~~~~v~~vl~~l 89 (474)
T 2iz1_A 16 MGKNLALNVESRGYTVA-IYNRTTSKTEEVFKEHQDKNLVF--TKTLEEFVGSL--EKPR-RIMLMVQAGAATDATIKSL 89 (474)
T ss_dssp HHHHHHHHHHHTTCCEE-EECSSHHHHHHHHHHTTTSCEEE--CSSHHHHHHTB--CSSC-EEEECCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEE-EEcCCHHHHHHHHHhCcCCCeEE--eCCHHHHHhhc--cCCC-EEEEEccCchHHHHHHHHH
Confidence 89999988888888875 3454332110000 000113333 34666554421 1478 55555544 5677766544
Q ss_pred H---hcCCCeEEecCCCCH
Q 024671 79 S---KVGVPFVMGTTGGDR 94 (264)
Q Consensus 79 ~---~~g~plViGTTG~~~ 94 (264)
. +.|..+|.++||...
T Consensus 90 ~~~l~~g~iiId~s~~~~~ 108 (474)
T 2iz1_A 90 LPLLDIGDILIDGGNTHFP 108 (474)
T ss_dssp GGGCCTTCEEEECSCCCHH
T ss_pred HhhCCCCCEEEECCCCCHH
Confidence 3 346667778888743
No 300
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=50.11 E-value=36 Score=29.00 Aligned_cols=73 Identities=15% Similarity=0.178 Sum_probs=47.4
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++.. ++.. +.+++..+++.....+ .+..|+|.++.+...++.+
T Consensus 16 IG~aia~~la~~G~~V~~~-~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 75 (264)
T 3tfo_A 16 IGEGIARELGVAGAKILLG-ARRQ-------------------ARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAA 75 (264)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSH-------------------HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECCH-------------------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4889999888889987753 3221 1122222222211222 3457999999999999887
Q ss_pred Hhc--CCCeEEecCCCC
Q 024671 79 SKV--GVPFVMGTTGGD 93 (264)
Q Consensus 79 ~~~--g~plViGTTG~~ 93 (264)
.+. ++.+||-..|..
T Consensus 76 ~~~~g~iD~lVnnAG~~ 92 (264)
T 3tfo_A 76 VDTWGRIDVLVNNAGVM 92 (264)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 764 788999888863
No 301
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=50.10 E-value=15 Score=32.51 Aligned_cols=11 Identities=18% Similarity=0.139 Sum_probs=6.0
Q ss_pred CCeEEecCCCC
Q 024671 83 VPFVMGTTGGD 93 (264)
Q Consensus 83 ~plViGTTG~~ 93 (264)
+|+++||.+.+
T Consensus 73 ~pviaGvg~~~ 83 (294)
T 3b4u_A 73 SRIVTGVLVDS 83 (294)
T ss_dssp GGEEEEECCSS
T ss_pred CcEEEeCCCcc
Confidence 55555555544
No 302
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=50.09 E-value=43 Score=28.46 Aligned_cols=32 Identities=9% Similarity=0.048 Sum_probs=25.8
Q ss_pred EEEECCChHHHHHHHHHHHhc--CCCeEEecCCC
Q 024671 61 IVVDYTVPAAVNGNAELYSKV--GVPFVMGTTGG 92 (264)
Q Consensus 61 VvIDFS~p~~~~~~~~~~~~~--g~plViGTTG~ 92 (264)
+..|++.++.+.+.++.+.+. ++.+||-..|.
T Consensus 98 ~~~Dl~d~~~v~~~~~~~~~~~~~id~li~~Ag~ 131 (285)
T 2c07_A 98 YAGDVSKKEEISEVINKILTEHKNVDILVNNAGI 131 (285)
T ss_dssp EECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCC
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 457999999999988877653 68899988885
No 303
>3sm9_A Mglur3, metabotropic glutamate receptor 3; structural genomics, structural genomics consortium, SGC, CE membrane, G-protein coupled receptor; HET: Z99; 2.26A {Homo sapiens}
Probab=49.62 E-value=75 Score=29.39 Aligned_cols=49 Identities=12% Similarity=0.057 Sum_probs=36.8
Q ss_pred chhhHH-hhhhcCCCCEEEEECCChHHHHHHHHHHHhcCC-CeEEecCCCCH
Q 024671 45 DRESVL-ASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGV-PFVMGTTGGDR 94 (264)
Q Consensus 45 dl~~~l-~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~-plViGTTG~~~ 94 (264)
|....+ ..+....+| |||=|..+..+...++.+.+.|+ .+.|+|.||+.
T Consensus 230 d~~~~l~~~i~~s~a~-vIi~~~~~~~~~~l~~~~~~~g~~~~wI~s~~w~~ 280 (479)
T 3sm9_A 230 SYDSVIRELLQKPNAR-VVVLFMRSDDSRELIAAASRANASFTWVASDGWGA 280 (479)
T ss_dssp HHHHHHHHHHTCTTCC-EEEEECCHHHHHHHHHHHHHTTCCCEEEECTTTTT
T ss_pred HHHHHHHHHHhcCCCe-EEEEEcChHHHHHHHHHHHHhCCEEEEEEechhhc
Confidence 334444 334456789 67778888888899999999887 68899999965
No 304
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=49.59 E-value=40 Score=30.47 Aligned_cols=80 Identities=30% Similarity=0.287 Sum_probs=46.7
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCC-----------cccccc----------ccccCceeEeecCCchhhHHhhhhcCCC
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTE-----------EESGQK----------VEVCGKEIQVHGLSDRESVLASVFDKYP 58 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~-----------~~~g~~----------~~~~~~~i~i~~~~dl~~~l~~~~~~~~ 58 (264)
.|+.+.+++. +++++++++.+... ...|+- +.+.+..+.+....|.++. . ..+..+
T Consensus 12 iGr~l~R~l~~~~~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~i-~-w~~~~v 89 (334)
T 3cmc_O 12 IGRNVFRAALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERDPENL-A-WGEIGV 89 (334)
T ss_dssp HHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSSGGGC-C-TGGGTC
T ss_pred HHHHHHHHHhCCCCeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEEccCcEEECCEEEEEEecCChhhc-C-cccCcc
Confidence 3899999987 57999998765310 111111 1112334555533343321 0 111257
Q ss_pred CEEEEECCChHHHHHHHHHHHhcCC
Q 024671 59 NMIVVDYTVPAAVNGNAELYSKVGV 83 (264)
Q Consensus 59 d~VvIDFS~p~~~~~~~~~~~~~g~ 83 (264)
| +|++-|-.....+..+..++.|.
T Consensus 90 D-vV~~atg~~~s~e~a~~~l~~Ga 113 (334)
T 3cmc_O 90 D-IVVESTGRFTKREDAAKHLEAGA 113 (334)
T ss_dssp C-EEEECSSSCCBHHHHTHHHHTTC
T ss_pred C-EEEECCCchhhHHHHHHHHHCCC
Confidence 8 78987777777778888888887
No 305
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=49.54 E-value=20 Score=26.80 Aligned_cols=49 Identities=14% Similarity=0.200 Sum_probs=22.8
Q ss_pred CchhhHHhhhhc-CCCCEEEEECCChHH-HHHHHHHHHhc--CCCeEEecCCCC
Q 024671 44 SDRESVLASVFD-KYPNMIVVDYTVPAA-VNGNAELYSKV--GVPFVMGTTGGD 93 (264)
Q Consensus 44 ~dl~~~l~~~~~-~~~d~VvIDFS~p~~-~~~~~~~~~~~--g~plViGTTG~~ 93 (264)
.+.++++..+.. ..+|.|++|+..|.. -.+.++...+. .+|+|+ .|+..
T Consensus 36 ~~~~~a~~~l~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~-ls~~~ 88 (154)
T 2qsj_A 36 ETVSDALAFLEADNTVDLILLDVNLPDAEAIDGLVRLKRFDPSNAVAL-ISGET 88 (154)
T ss_dssp SSHHHHHHHHHTTCCCSEEEECC------CHHHHHHHHHHCTTSEEEE-C----
T ss_pred cCHHHHHHHHhccCCCCEEEEeCCCCCCchHHHHHHHHHhCCCCeEEE-EeCCC
Confidence 455556666555 678988999987752 23344444332 355554 44443
No 306
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=49.53 E-value=61 Score=27.54 Aligned_cols=72 Identities=21% Similarity=0.217 Sum_probs=46.8
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcC--CCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDK--YPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~--~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++.. ++... .+++..+++... ....+..|.|.++.+.+.++.+
T Consensus 44 IG~aia~~la~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~ 103 (276)
T 3r1i_A 44 IGKKVALAYAEAGAQVAVA-ARHSD-------------------ALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQM 103 (276)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSGG-------------------GGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 4888888888888887743 32211 112222222211 2223567999999999999988
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 104 ~~~~g~iD~lvnnAg~ 119 (276)
T 3r1i_A 104 TGELGGIDIAVCNAGI 119 (276)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 765 78899988886
No 307
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=49.16 E-value=16 Score=29.56 Aligned_cols=50 Identities=20% Similarity=0.251 Sum_probs=32.0
Q ss_pred CCchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHh--cCCCeEEecCCCC
Q 024671 43 LSDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSK--VGVPFVMGTTGGD 93 (264)
Q Consensus 43 ~~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~--~g~plViGTTG~~ 93 (264)
..+.++++..+....||.|++|...|. .-.+.++...+ ..+|+|+=| +.+
T Consensus 37 ~~~~~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii~lt-~~~ 89 (233)
T 1ys7_A 37 AVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLS-ARS 89 (233)
T ss_dssp ESSHHHHHHHHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEE-CCC
T ss_pred ECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEEEE-cCC
Confidence 345666666666667998899999885 23455555554 357776655 443
No 308
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=49.07 E-value=38 Score=28.54 Aligned_cols=41 Identities=20% Similarity=0.327 Sum_probs=30.5
Q ss_pred HhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEecC
Q 024671 50 LASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT 90 (264)
Q Consensus 50 l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGTT 90 (264)
+..+....+|.++|--..++.+...++.+.+.|+|+|.--+
T Consensus 54 i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~~ 94 (297)
T 3rot_A 54 IESALATYPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDT 94 (297)
T ss_dssp HHHHHHTCCSEEEECCCCSSTTHHHHHHHHHHTCCEEEESC
T ss_pred HHHHHHcCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcC
Confidence 44444467896677666777778889999999999998544
No 309
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=48.73 E-value=37 Score=28.88 Aligned_cols=40 Identities=8% Similarity=0.110 Sum_probs=29.1
Q ss_pred HhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEec
Q 024671 50 LASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGT 89 (264)
Q Consensus 50 l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGT 89 (264)
+..+....+|.++|--+.++...+.++.+.+.|+|+|.--
T Consensus 52 i~~~~~~~vdgiIi~~~~~~~~~~~~~~~~~~giPvV~~~ 91 (330)
T 3uug_A 52 IENMVTKGVKVLVIASIDGTTLSDVLKQAGEQGIKVIAYD 91 (330)
T ss_dssp HHHHHHHTCSEEEECCSSGGGGHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHcCCCEEEEEcCCchhHHHHHHHHHHCCCCEEEEC
Confidence 3333345789666666667778888999999999998743
No 310
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=48.72 E-value=54 Score=27.75 Aligned_cols=74 Identities=14% Similarity=0.152 Sum_probs=45.7
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++....+.. ..+++..+.+...... .+..|+|.++.+...++.+
T Consensus 40 IG~aia~~la~~G~~V~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~ 100 (269)
T 4dmm_A 40 IGRAIALELAAAGAKVAVNYASSA-------------------GAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAV 100 (269)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCH-------------------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCh-------------------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 478888888888888764321111 0111111222111222 3457999999999999887
Q ss_pred Hhc--CCCeEEecCCCC
Q 024671 79 SKV--GVPFVMGTTGGD 93 (264)
Q Consensus 79 ~~~--g~plViGTTG~~ 93 (264)
.+. ++.+||-..|..
T Consensus 101 ~~~~g~id~lv~nAg~~ 117 (269)
T 4dmm_A 101 IERWGRLDVLVNNAGIT 117 (269)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 765 788999887763
No 311
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=48.52 E-value=56 Score=26.94 Aligned_cols=72 Identities=15% Similarity=0.226 Sum_probs=45.8
Q ss_pred ChHHHHHHHHhCCCeEEEEEcC-CCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFG-TEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAEL 77 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~-~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~ 77 (264)
+|+.+++.+.+.|.+++.. ++ .. +.+++..+++.....+ .+..|++.++.+.+.++.
T Consensus 16 iG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 75 (246)
T 2uvd_A 16 IGRAIAIDLAKQGANVVVN-YAGNE-------------------QKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQ 75 (246)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSCH-------------------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCCH-------------------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 4889999888889988753 22 21 0111111222111222 345699999999998887
Q ss_pred HHhc--CCCeEEecCCC
Q 024671 78 YSKV--GVPFVMGTTGG 92 (264)
Q Consensus 78 ~~~~--g~plViGTTG~ 92 (264)
+.+. ++.+||-..|.
T Consensus 76 ~~~~~g~id~lv~nAg~ 92 (246)
T 2uvd_A 76 TVDVFGQVDILVNNAGV 92 (246)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 7664 68899988885
No 312
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=48.10 E-value=1.1e+02 Score=25.03 Aligned_cols=38 Identities=8% Similarity=0.001 Sum_probs=25.8
Q ss_pred HhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEecC
Q 024671 50 LASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT 90 (264)
Q Consensus 50 l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGTT 90 (264)
+..+....+|.+++--+.+ .+.++.+.+.++|+|+--.
T Consensus 56 ~~~l~~~~vdgiIi~~~~~---~~~~~~l~~~~iPvV~i~~ 93 (276)
T 3jy6_A 56 LRAIGSRGFDGLILQSFSN---PQTVQEILHQQMPVVSVDR 93 (276)
T ss_dssp HHHHHTTTCSEEEEESSCC---HHHHHHHHTTSSCEEEESC
T ss_pred HHHHHhCCCCEEEEecCCc---HHHHHHHHHCCCCEEEEec
Confidence 4444456789655555444 6778888889999886443
No 313
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=48.08 E-value=77 Score=23.04 Aligned_cols=115 Identities=15% Similarity=0.075 Sum_probs=59.8
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeE-eec-CCchhhHHhhhhcCCCCEEEEECCChHHHHHH-HHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQ-VHG-LSDRESVLASVFDKYPNMIVVDYTVPAAVNGN-AEL 77 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~-i~~-~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~-~~~ 77 (264)
||+.+++.+.+.|++++. ++..+... ..+. ...++. +.. ..+.+ .+.......+| ++|-.+........ ...
T Consensus 15 iG~~~a~~L~~~g~~v~~-~d~~~~~~-~~~~-~~~~~~~~~~d~~~~~-~l~~~~~~~~d-~vi~~~~~~~~~~~~~~~ 89 (140)
T 1lss_A 15 VGYTLAKSLSEKGHDIVL-IDIDKDIC-KKAS-AEIDALVINGDCTKIK-TLEDAGIEDAD-MYIAVTGKEEVNLMSSLL 89 (140)
T ss_dssp HHHHHHHHHHHTTCEEEE-EESCHHHH-HHHH-HHCSSEEEESCTTSHH-HHHHTTTTTCS-EEEECCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEE-EECCHHHH-HHHH-HhcCcEEEEcCCCCHH-HHHHcCcccCC-EEEEeeCCchHHHHHHHH
Confidence 588888888878888774 45432111 0010 001222 111 11222 22221123578 66766655444333 345
Q ss_pred HHhcC-CCeEEecCCCCHHHHHHHHHccCCcEEEccchhHHHHHHHH
Q 024671 78 YSKVG-VPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLA 123 (264)
Q Consensus 78 ~~~~g-~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlGv~ll~~ 123 (264)
+.+.+ ..+|+-+++.... +.+ +..+.-.+++|....+-.+...
T Consensus 90 ~~~~~~~~ii~~~~~~~~~--~~l-~~~g~~~v~~p~~~~~~~~~~~ 133 (140)
T 1lss_A 90 AKSYGINKTIARISEIEYK--DVF-ERLGVDVVVSPELIAANYIEKL 133 (140)
T ss_dssp HHHTTCCCEEEECSSTTHH--HHH-HHTTCSEEECHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEEecCHhHH--HHH-HHcCCCEEECHHHHHHHHHHHH
Confidence 55555 3577767665443 233 3456778999999988755443
No 314
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=47.82 E-value=15 Score=32.32 Aligned_cols=16 Identities=19% Similarity=0.372 Sum_probs=10.5
Q ss_pred cCCCeEEecCCCCHHH
Q 024671 81 VGVPFVMGTTGGDRVR 96 (264)
Q Consensus 81 ~g~plViGTTG~~~~~ 96 (264)
.++|+|+||.+.+.++
T Consensus 69 gr~pviaGvg~~~t~~ 84 (292)
T 2ojp_A 69 GRIPVIAGTGANATAE 84 (292)
T ss_dssp TSSCEEEECCCSSHHH
T ss_pred CCCcEEEecCCccHHH
Confidence 3577777777766443
No 315
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=47.39 E-value=65 Score=25.65 Aligned_cols=72 Identities=11% Similarity=0.118 Sum_probs=39.3
Q ss_pred CCchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHhc--CCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHH
Q 024671 43 LSDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSKV--GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQ 117 (264)
Q Consensus 43 ~~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~~--g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlG 117 (264)
..+.++++..+ ..||.|++|...|. .-.+.++...+. .+|+|+=|.--+.+......+ .+.--++.-.++..
T Consensus 31 ~~~~~~al~~~--~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~~~~~~~~~~~-~ga~~~l~Kp~~~~ 105 (220)
T 1p2f_A 31 FLTGEDFLNDE--EAFHVVVLDVMLPDYSGYEICRMIKETRPETWVILLTLLSDDESVLKGFE-AGADDYVTKPFNPE 105 (220)
T ss_dssp ESSHHHHHHCC--SCCSEEEEESBCSSSBHHHHHHHHHHHCTTSEEEEEESCCSHHHHHHHHH-HTCSEEEESSCCHH
T ss_pred ECCHHHHHHhc--CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEEcCCCHHHHHHHHH-cCCCEEEECCCCHH
Confidence 34555666554 46898899999885 234555555443 566666554334433333333 34333444455553
No 316
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=47.39 E-value=51 Score=31.27 Aligned_cols=88 Identities=19% Similarity=0.182 Sum_probs=48.2
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCcccccccc-c-cCceeEeecCCchhhHHhhhhcCCCCEEEEECCCh-HHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVE-V-CGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVP-AAVNGNAEL 77 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~-~-~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p-~~~~~~~~~ 77 (264)
||+.++..+.+.|+++.. .++.+........ . .+.++.. ..+++++...+ ..+|. ||=...+ ..+.+.++.
T Consensus 21 MG~~lA~~La~~G~~V~v-~dr~~~~~~~l~~~~~~~~gi~~--~~s~~e~v~~l--~~aDv-Vil~Vp~~~~v~~vl~~ 94 (497)
T 2p4q_A 21 MGQNLILNAADHGFTVCA-YNRTQSKVDHFLANEAKGKSIIG--ATSIEDFISKL--KRPRK-VMLLVKAGAPVDALINQ 94 (497)
T ss_dssp HHHHHHHHHHHTTCCEEE-ECSSSHHHHHHHHTTTTTSSEEC--CSSHHHHHHTS--CSSCE-EEECCCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEE-EeCCHHHHHHHHcccccCCCeEE--eCCHHHHHhcC--CCCCE-EEEEcCChHHHHHHHHH
Confidence 899999988888998863 4544321110000 0 0023332 34666554422 13784 4444433 577777765
Q ss_pred HHh---cCCCeEEecCCCCH
Q 024671 78 YSK---VGVPFVMGTTGGDR 94 (264)
Q Consensus 78 ~~~---~g~plViGTTG~~~ 94 (264)
... .|..+|.++||...
T Consensus 95 l~~~l~~g~iIId~s~~~~~ 114 (497)
T 2p4q_A 95 IVPLLEKGDIIIDGGNSHFP 114 (497)
T ss_dssp HGGGCCTTCEEEECSCCCHH
T ss_pred HHHhCCCCCEEEECCCCChh
Confidence 544 35557778888753
No 317
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=47.38 E-value=18 Score=31.98 Aligned_cols=12 Identities=25% Similarity=0.601 Sum_probs=6.4
Q ss_pred CCCeEEecCCCC
Q 024671 82 GVPFVMGTTGGD 93 (264)
Q Consensus 82 g~plViGTTG~~ 93 (264)
++|+|+||.+.+
T Consensus 69 rvpviaGvg~~~ 80 (297)
T 2rfg_A 69 RVPVIAGAGSNN 80 (297)
T ss_dssp SSCBEEECCCSS
T ss_pred CCeEEEccCCCC
Confidence 355555555544
No 318
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=47.05 E-value=33 Score=32.24 Aligned_cols=109 Identities=11% Similarity=0.059 Sum_probs=56.9
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccc-----ccc-c---ccc--------CceeEeecCCchhhHHhhhhcCCCCEEEE
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEES-----GQK-V---EVC--------GKEIQVHGLSDRESVLASVFDKYPNMIVV 63 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~-----g~~-~---~~~--------~~~i~i~~~~dl~~~l~~~~~~~~d~VvI 63 (264)
||..++..+.+.|+++++ ++..+..+ |.. . ++. ...+.. +.|+++++. .+|+|+|
T Consensus 19 vG~~~A~~La~~G~~V~~-~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~--ttd~~ea~~-----~aDvvii 90 (446)
T 4a7p_A 19 VGLVSGACFSDFGHEVVC-VDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSF--TTDLAEGVK-----DADAVFI 90 (446)
T ss_dssp HHHHHHHHHHHTTCEEEE-ECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE--ESCHHHHHT-----TCSEEEE
T ss_pred HHHHHHHHHHHCCCEEEE-EeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEE--ECCHHHHHh-----cCCEEEE
Confidence 688888777788999885 45333211 110 0 000 011222 346555543 5786666
Q ss_pred ECCChH----------HHHHHHHHHHh---cCCCeEEecCCCCH---HHHHH-HHHc---cCCcEEEccchhHHH
Q 024671 64 DYTVPA----------AVNGNAELYSK---VGVPFVMGTTGGDR---VRLHE-TIEN---SNVYAVISPQMGKQV 118 (264)
Q Consensus 64 DFS~p~----------~~~~~~~~~~~---~g~plViGTTG~~~---~~~~~-l~~~---~~~~~v~s~NfSlGv 118 (264)
=..+|. .+.+.++...+ .+. +||-.++..+ +++.+ +.+. ...+++++|+|.--.
T Consensus 91 ~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~-iVV~~STv~pgtt~~l~~~l~e~~~~~d~~v~~~Pe~a~eG 164 (446)
T 4a7p_A 91 AVGTPSRRGDGHADLSYVFAAAREIAENLTKPS-VIVTKSTVPVGTGDEVERIIAEVAPNSGAKVVSNPEFLREG 164 (446)
T ss_dssp CCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCC-EEEECSCCCTTHHHHHHHHHHHHSTTSCCEEEECCCCCCTT
T ss_pred EcCCCCccccCCccHHHHHHHHHHHHHhcCCCC-EEEEeCCCCchHHHHHHHHHHHhCCCCCceEEeCccccccc
Confidence 665664 46666555443 344 4444555553 23333 3332 237889999875433
No 319
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=46.95 E-value=49 Score=29.76 Aligned_cols=80 Identities=18% Similarity=0.147 Sum_probs=49.8
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCCcccccccc-----ccC-ceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHH
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTEEESGQKVE-----VCG-KEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNG 73 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~~~~g~~~~-----~~~-~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~ 73 (264)
+|+.+++.+. .++++|++..+.. ..|+.+. ..+ ..+.+. +++ .+ ..+| +|+.-+-.....+
T Consensus 16 iG~~llr~L~~~p~~elv~v~s~~--~~g~~~~~~~~~~~g~~~~~~~---~~~----~~--~~vD-vV~~a~g~~~s~~ 83 (345)
T 2ozp_A 16 AGGEFLRLALSHPYLEVKQVTSRR--FAGEPVHFVHPNLRGRTNLKFV---PPE----KL--EPAD-ILVLALPHGVFAR 83 (345)
T ss_dssp HHHHHHHHHHTCTTEEEEEEBCST--TTTSBGGGTCGGGTTTCCCBCB---CGG----GC--CCCS-EEEECCCTTHHHH
T ss_pred HHHHHHHHHHcCCCcEEEEEECch--hhCchhHHhCchhcCccccccc---chh----Hh--cCCC-EEEEcCCcHHHHH
Confidence 4899999887 5788999765422 2233321 111 112221 221 12 2578 6787776678889
Q ss_pred HHHHHHhcCCCeEEecCCC
Q 024671 74 NAELYSKVGVPFVMGTTGG 92 (264)
Q Consensus 74 ~~~~~~~~g~plViGTTG~ 92 (264)
.++.+.+.|+.+|.-+.-|
T Consensus 84 ~a~~~~~aG~~VId~Sa~~ 102 (345)
T 2ozp_A 84 EFDRYSALAPVLVDLSADF 102 (345)
T ss_dssp THHHHHTTCSEEEECSSTT
T ss_pred HHHHHHHCCCEEEEcCccc
Confidence 9999999999877766544
No 320
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=46.88 E-value=1.3e+02 Score=25.80 Aligned_cols=72 Identities=17% Similarity=0.183 Sum_probs=46.1
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCC-CC--EEEEECCChHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKY-PN--MIVVDYTVPAAVNGNAEL 77 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~-~d--~VvIDFS~p~~~~~~~~~ 77 (264)
+|+.+++.+.+.|..++.. ++.. +.+++..+++.... .. .+..|+|.++.+.+.++.
T Consensus 53 IG~aia~~la~~G~~V~~~-~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 112 (293)
T 3rih_A 53 IGRGIATVFARAGANVAVA-ARSP-------------------RELSSVTAELGELGAGNVIGVRLDVSDPGSCADAART 112 (293)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSG-------------------GGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECCH-------------------HHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHH
Confidence 4888888888888887743 3221 11222222222211 12 356799999999999988
Q ss_pred HHhc--CCCeEEecCCC
Q 024671 78 YSKV--GVPFVMGTTGG 92 (264)
Q Consensus 78 ~~~~--g~plViGTTG~ 92 (264)
+.+. ++.+||-..|.
T Consensus 113 ~~~~~g~iD~lvnnAg~ 129 (293)
T 3rih_A 113 VVDAFGALDVVCANAGI 129 (293)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 7664 78889888875
No 321
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=46.83 E-value=46 Score=29.23 Aligned_cols=22 Identities=23% Similarity=0.007 Sum_probs=18.0
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCC
Q 024671 1 MGKAVIKAADAAGLELVPVSFGT 23 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~ 23 (264)
||+.+++.+.+.|+++.. .++.
T Consensus 14 MG~~mA~~L~~~G~~v~v-~dr~ 35 (300)
T 3obb_A 14 MGAPMATNLLKAGYLLNV-FDLV 35 (300)
T ss_dssp THHHHHHHHHHTTCEEEE-ECSS
T ss_pred HHHHHHHHHHhCCCeEEE-EcCC
Confidence 999999999889999874 4543
No 322
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=46.48 E-value=91 Score=27.10 Aligned_cols=72 Identities=11% Similarity=0.085 Sum_probs=46.6
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcC----CCCEEEEECCChHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDK----YPNMIVVDYTVPAAVNGNAE 76 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~----~~d~VvIDFS~p~~~~~~~~ 76 (264)
+|+.+++.+.+.|..|+.. ++... .+++..+.+... ....+..|.|.++.+...++
T Consensus 20 IG~~la~~l~~~G~~Vv~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~ 79 (319)
T 3ioy_A 20 VGIGLVRQLLNQGCKVAIA-DIRQD-------------------SIDKALATLEAEGSGPEVMGVQLDVASREGFKMAAD 79 (319)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECCHH-------------------HHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHH
Confidence 4888998888889887753 32211 111222221111 12235679999999999999
Q ss_pred HHHhc--CCCeEEecCCC
Q 024671 77 LYSKV--GVPFVMGTTGG 92 (264)
Q Consensus 77 ~~~~~--g~plViGTTG~ 92 (264)
.+.+. ++.+||-+.|.
T Consensus 80 ~~~~~~g~id~lv~nAg~ 97 (319)
T 3ioy_A 80 EVEARFGPVSILCNNAGV 97 (319)
T ss_dssp HHHHHTCCEEEEEECCCC
T ss_pred HHHHhCCCCCEEEECCCc
Confidence 88775 67889988885
No 323
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=46.28 E-value=51 Score=27.68 Aligned_cols=72 Identities=22% Similarity=0.160 Sum_probs=45.8
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++...+.|..++.. ++.. +.+++..+++.....+ .+..|.|.++.+.+.++.+
T Consensus 23 IG~aia~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (264)
T 3ucx_A 23 LGTTLARRCAEQGADLVLA-ARTV-------------------ERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDET 82 (264)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCcCEEEEE-eCCH-------------------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4888888888888887743 3221 1122222222222223 3456999999999999888
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.++|-..|.
T Consensus 83 ~~~~g~id~lv~nAg~ 98 (264)
T 3ucx_A 83 MKAYGRVDVVINNAFR 98 (264)
T ss_dssp HHHTSCCSEEEECCCS
T ss_pred HHHcCCCcEEEECCCC
Confidence 775 67888877665
No 324
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=46.21 E-value=84 Score=28.43 Aligned_cols=111 Identities=15% Similarity=0.169 Sum_probs=63.4
Q ss_pred hHHHHHHHHh---CCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 2 GKAVIKAADA---AGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 2 G~~i~~~~~~---~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
|+++++.+.+ +..+|+.... .+..|+.+...+..+.+...+. +.+ ..+| +++.-+-.....+....+
T Consensus 14 G~el~~lL~~h~fp~~el~~~~s--~~~aG~~~~~~~~~~~~~~~~~-----~~~--~~~D-vvf~a~~~~~s~~~a~~~ 83 (344)
T 3tz6_A 14 GQVMRTLLDERDFPASAVRFFAS--ARSQGRKLAFRGQEIEVEDAET-----ADP--SGLD-IALFSAGSAMSKVQAPRF 83 (344)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEC--TTTSSCEEEETTEEEEEEETTT-----SCC--TTCS-EEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCceEEEEEEC--cccCCCceeecCCceEEEeCCH-----HHh--ccCC-EEEECCChHHHHHHHHHH
Confidence 8899988774 4566665422 2345655543333344432111 111 2578 788888778889999999
Q ss_pred HhcCCCeEEecCCC--CHH--------HH-HHHHHccCCcEEEccc-hhHHHHHHHH
Q 024671 79 SKVGVPFVMGTTGG--DRV--------RL-HETIENSNVYAVISPQ-MGKQVVAFLA 123 (264)
Q Consensus 79 ~~~g~plViGTTG~--~~~--------~~-~~l~~~~~~~~v~s~N-fSlGv~ll~~ 123 (264)
.+.|+.+|.-++-| +++ .. +.+.. ++..+|-.|| +..++.+..+
T Consensus 84 ~~~G~~vID~Sa~~R~~~~~p~~vpevN~~~~i~~-~~~~iIanpgC~tt~~~l~l~ 139 (344)
T 3tz6_A 84 AAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHR-RPKGIIANPNCTTMAAMPVLK 139 (344)
T ss_dssp HHTTCEEEECSSTTTTCTTSCBCCTTTSHHHHTTC-CTTSEEECCCHHHHHHHHHHH
T ss_pred HhCCCEEEECCCccccCCCccEEEccCCCHHHhhh-cCCCEEECCCcHHHHHHHHHH
Confidence 99999888776544 111 11 22322 2235777888 4454444333
No 325
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=46.08 E-value=35 Score=31.29 Aligned_cols=46 Identities=11% Similarity=0.112 Sum_probs=35.6
Q ss_pred chhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEecC
Q 024671 45 DRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT 90 (264)
Q Consensus 45 dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGTT 90 (264)
+..+.|+...+...-+-.+.+.+-+.+...++.|.+.+.|+++.++
T Consensus 8 ~~~~ll~~A~~~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s 53 (349)
T 3elf_A 8 VYAEMLGQAKQNSYAFPAINCTSSETVNAAIKGFADAGSDGIIQFS 53 (349)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHHcCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcC
Confidence 3444555554455555589999999999999999999999999876
No 326
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=46.03 E-value=85 Score=26.11 Aligned_cols=80 Identities=11% Similarity=0.103 Sum_probs=42.8
Q ss_pred eeEeecCCchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHh--cCCCeEEecCCCCHHHHHHHHHccCCcEEEccc
Q 024671 37 EIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQ 113 (264)
Q Consensus 37 ~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~--~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~N 113 (264)
|+.+....+.++++..+....+|.|++|...|.. -.+.++...+ ..+|+|+= |+....+...-+..++.--++.-.
T Consensus 153 g~~v~~a~~~~eal~~l~~~~~dlvl~D~~mp~~~G~~l~~~ir~~~~~~piI~l-t~~~~~~~~~~~~~~G~~~~l~KP 231 (254)
T 2ayx_A 153 GYQCKTANDGVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGV-TANALAEEKQRCLESGMDSCLSKP 231 (254)
T ss_dssp TSEEEEECCSHHHHHHHHHSCCSEEEEEESSCSSCCHHHHHHHHHHHCCSCEEEE-ESSTTSHHHHHHHHCCCEEEEESS
T ss_pred CCEEEEECCHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhcCCCCcEEEE-ECCCCHHHHHHHHHcCCceEEECC
Confidence 3444445666777776666679988999998841 1233333332 35666554 455433322223334543344444
Q ss_pred hhHH
Q 024671 114 MGKQ 117 (264)
Q Consensus 114 fSlG 117 (264)
++..
T Consensus 232 ~~~~ 235 (254)
T 2ayx_A 232 VTLD 235 (254)
T ss_dssp CCHH
T ss_pred CCHH
Confidence 5543
No 327
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=46.00 E-value=37 Score=28.85 Aligned_cols=79 Identities=14% Similarity=0.053 Sum_probs=41.8
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECC-ChHHHHHHHH---
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYT-VPAAVNGNAE--- 76 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS-~p~~~~~~~~--- 76 (264)
||+.+++.+.+.|+++.. ++ .+... +.+ ...++.+ ..++++++. .+| +||-.+ .|..+...+.
T Consensus 14 ~G~~~a~~l~~~g~~V~~-~~-~~~~~-~~~--~~~g~~~--~~~~~~~~~-----~~D-~vi~~vp~~~~~~~v~~~~~ 80 (295)
T 1yb4_A 14 MGSPMAINLARAGHQLHV-TT-IGPVA-DEL--LSLGAVN--VETARQVTE-----FAD-IIFIMVPDTPQVEDVLFGEH 80 (295)
T ss_dssp THHHHHHHHHHTTCEEEE-CC-SSCCC-HHH--HTTTCBC--CSSHHHHHH-----TCS-EEEECCSSHHHHHHHHHSTT
T ss_pred HHHHHHHHHHhCCCEEEE-Ec-CHHHH-HHH--HHcCCcc--cCCHHHHHh-----cCC-EEEEECCCHHHHHHHHhCch
Confidence 899999888878898863 44 32211 111 1112222 234544443 478 455555 5555566554
Q ss_pred H---HHhcCCCeEEecCCC
Q 024671 77 L---YSKVGVPFVMGTTGG 92 (264)
Q Consensus 77 ~---~~~~g~plViGTTG~ 92 (264)
. +.+.+..+|.-+||.
T Consensus 81 ~l~~~l~~~~~vv~~s~~~ 99 (295)
T 1yb4_A 81 GCAKTSLQGKTIVDMSSIS 99 (295)
T ss_dssp SSTTSCCTTEEEEECSCCC
T ss_pred hHhhcCCCCCEEEECCCCC
Confidence 1 223455566666664
No 328
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=45.98 E-value=1.1e+02 Score=25.82 Aligned_cols=19 Identities=16% Similarity=0.232 Sum_probs=15.4
Q ss_pred ChHHHHHHHHhCCCeEEEE
Q 024671 1 MGKAVIKAADAAGLELVPV 19 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~ 19 (264)
.|+.+++.+.+.|+++.+.
T Consensus 23 iG~~l~~~L~~~g~~V~~l 41 (318)
T 2r6j_A 23 IGNHMVKGSLKLGHPTYVF 41 (318)
T ss_dssp THHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHCCCcEEEE
Confidence 4899999988888888754
No 329
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=45.72 E-value=71 Score=23.02 Aligned_cols=55 Identities=4% Similarity=-0.124 Sum_probs=27.2
Q ss_pred eecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHhc--CCCeEEecCCCCHHHH
Q 024671 40 VHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKV--GVPFVMGTTGGDRVRL 97 (264)
Q Consensus 40 i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~--g~plViGTTG~~~~~~ 97 (264)
+....+.++++..+....+| ++| ....+ -.+.++...+. .+|+|+-|.--+.+..
T Consensus 45 v~~~~~~~~al~~l~~~~~d-lvi-~~~~~-g~~~~~~l~~~~~~~~ii~ls~~~~~~~~ 101 (137)
T 2pln_A 45 ADVTESLEDGEYLMDIRNYD-LVM-VSDKN-ALSFVSRIKEKHSSIVVLVSSDNPTSEEE 101 (137)
T ss_dssp EEEESCHHHHHHHHHHSCCS-EEE-ECSTT-HHHHHHHHHHHSTTSEEEEEESSCCHHHH
T ss_pred EEEeCCHHHHHHHHHcCCCC-EEE-EcCcc-HHHHHHHHHhcCCCccEEEEeCCCCHHHH
Confidence 33344556666655556788 566 33222 23444444333 5666665543344333
No 330
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=45.70 E-value=9.1 Score=34.50 Aligned_cols=32 Identities=16% Similarity=0.284 Sum_probs=17.4
Q ss_pred CCCEEEEECCC-hHHHHHHHHHHHhcCCCeEEec
Q 024671 57 YPNMIVVDYTV-PAAVNGNAELYSKVGVPFVMGT 89 (264)
Q Consensus 57 ~~d~VvIDFS~-p~~~~~~~~~~~~~g~plViGT 89 (264)
.+| ++||.+. ++.+...++.+...|.=+++|.
T Consensus 253 g~D-vvid~~G~~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 253 GVD-VVIECAGVAETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp CEE-EEEECSCCHHHHHHHHHHEEEEEEEEECSC
T ss_pred CCC-EEEECCCCHHHHHHHHHHhccCCEEEEEec
Confidence 345 5667665 5555555555544555444444
No 331
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=45.32 E-value=80 Score=28.22 Aligned_cols=68 Identities=7% Similarity=-0.054 Sum_probs=44.7
Q ss_pred EEEE-ECCChHHHHHHHHHHHhcCC---CeEEecCCCCHHHHHHHHHccCCcEEEccchhHHHHHHHHHHHHHH
Q 024671 60 MIVV-DYTVPAAVNGNAELYSKVGV---PFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAFLAAMEIMA 129 (264)
Q Consensus 60 ~VvI-DFS~p~~~~~~~~~~~~~g~---plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlGv~ll~~~~~~aa 129 (264)
.+.| |-.+|+.=.+.++.|++.+. |+|=-.||...+++-.++...+.|++.-++-. ++.+.++++.+.
T Consensus 124 plsI~DT~~~~~~~~V~eaal~aga~~k~iINdvs~~~~~~~~~~aa~~g~~vv~m~~~d--v~~l~~~~~~a~ 195 (310)
T 2h9a_B 124 PLMIIGCGVEEKDAEIFPVIGEALSGRNCLLSSATKDNYKPIVATCMVHGHSVVASAPLD--INLSKQLNIMIM 195 (310)
T ss_dssp CEEEECCSCHHHHHHHHHHHHHHTTTSCCEEEEECTTTHHHHHHHHHHHTCEEEEECSSC--HHHHHHHHHHHH
T ss_pred eEEEECCCCCCCCHHHHHHHHHhCCCCCCEEEECCCCccHHHHHHHHHhCCCEEEEChhH--HHHHHHHHHHHH
Confidence 3688 99555555555555555544 58888898877777777777788876544322 366666666554
No 332
>1w25_A Stalked-cell differentiation controlling protein; two-component system, ggdef domain, cyclic dinucleotide, cyclic-digmp; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* 2wb4_A*
Probab=45.27 E-value=64 Score=29.24 Aligned_cols=68 Identities=21% Similarity=0.218 Sum_probs=38.6
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHhc----CCCeEEecCCCCHHHHHHHHHccC-CcEEEcc
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV----GVPFVMGTTGGDRVRLHETIENSN-VYAVISP 112 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~----g~plViGTTG~~~~~~~~l~~~~~-~~~v~s~ 112 (264)
.+.++++..+....||.|++|...|.. -.+.++...+. .+|+|+-|.--+.+......+ .+ ...+.-|
T Consensus 32 ~~~~~al~~~~~~~~dlvllD~~mp~~~G~~~~~~l~~~~~~~~~pii~lt~~~~~~~~~~a~~-~Ga~~~l~KP 105 (459)
T 1w25_A 32 MDGPTALAMAARDLPDIILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLE-SGASDFLTKP 105 (459)
T ss_dssp SSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECSSCHHHHHHHHH-HTCCEEEESS
T ss_pred CCHHHHHHHHhcCCCCEEEEcCCCCCCCHHHHHHHHhcCcccCCCCEEEEECCCCHHHHHHHHH-cCCCEEEeCC
Confidence 455556665555679988999999952 34555555542 467777654334444333333 34 3444433
No 333
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=45.19 E-value=49 Score=28.79 Aligned_cols=64 Identities=16% Similarity=0.116 Sum_probs=34.5
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNA 75 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~ 75 (264)
||+.+++.+.+.|+++.. .++.+... +.+ ...++.. ..++++++. .+|+|++=...|..+.+.+
T Consensus 32 mG~~~A~~l~~~G~~V~~-~dr~~~~~-~~l--~~~g~~~--~~~~~~~~~-----~aDvvi~~vp~~~~~~~v~ 95 (310)
T 3doj_A 32 MGKAMSMNLLKNGFKVTV-WNRTLSKC-DEL--VEHGASV--CESPAEVIK-----KCKYTIAMLSDPCAALSVV 95 (310)
T ss_dssp HHHHHHHHHHHTTCEEEE-ECSSGGGG-HHH--HHTTCEE--CSSHHHHHH-----HCSEEEECCSSHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEE-EeCCHHHH-HHH--HHCCCeE--cCCHHHHHH-----hCCEEEEEcCCHHHHHHHH
Confidence 799999988888998874 45443211 111 1112332 235555443 3674444444566666555
No 334
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=45.10 E-value=40 Score=28.60 Aligned_cols=74 Identities=20% Similarity=0.201 Sum_probs=45.1
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+++++.+.+.|..++....+.. +.+++..+.+...... .+..|+|.++.+...++.+
T Consensus 39 IG~aia~~la~~G~~Vv~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 99 (267)
T 3u5t_A 39 IGAAIAARLASDGFTVVINYAGKA-------------------AAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATA 99 (267)
T ss_dssp HHHHHHHHHHHHTCEEEEEESSCS-------------------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCH-------------------HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 378888887777887774322221 0111111111111222 3457999999999999888
Q ss_pred Hhc--CCCeEEecCCCC
Q 024671 79 SKV--GVPFVMGTTGGD 93 (264)
Q Consensus 79 ~~~--g~plViGTTG~~ 93 (264)
.+. ++.++|-..|..
T Consensus 100 ~~~~g~iD~lvnnAG~~ 116 (267)
T 3u5t_A 100 EEAFGGVDVLVNNAGIM 116 (267)
T ss_dssp HHHHSCEEEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 775 678888888753
No 335
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=45.07 E-value=51 Score=30.17 Aligned_cols=53 Identities=9% Similarity=0.126 Sum_probs=34.2
Q ss_pred HhhhhcCCCCEEEEECC--ChHHHHHHHHHHHhc--CCCeEEecCCCCHHHHHHHHHc
Q 024671 50 LASVFDKYPNMIVVDYT--VPAAVNGNAELYSKV--GVPFVMGTTGGDRVRLHETIEN 103 (264)
Q Consensus 50 l~~~~~~~~d~VvIDFS--~p~~~~~~~~~~~~~--g~plViGTTG~~~~~~~~l~~~ 103 (264)
++.+.+..+|.|+||.+ +|+...+.++.+.+. +++++.|+. .+.++.+.+.++
T Consensus 113 ~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~v-~t~e~A~~a~~a 169 (366)
T 4fo4_A 113 VKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNV-ATAEGARALIEA 169 (366)
T ss_dssp HHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEEE-CSHHHHHHHHHH
T ss_pred HHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeeee-CCHHHHHHHHHc
Confidence 34444557886677765 466677777777766 677777754 466666665544
No 336
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=44.88 E-value=57 Score=27.88 Aligned_cols=72 Identities=14% Similarity=0.121 Sum_probs=45.8
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++. +++.. +.+++..+++...... .+..|.|.++.+...++.+
T Consensus 20 IG~aia~~la~~G~~V~~-~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 79 (280)
T 3tox_A 20 IGRAAALLFAREGAKVVV-TARNG-------------------NALAELTDEIAGGGGEAAALAGDVGDEALHEALVELA 79 (280)
T ss_dssp HHHHHHHHHHHTTCEEEE-CCSCH-------------------HHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEE-EECCH-------------------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 488999888888988764 23221 1122222222222223 2346999999999999887
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.++|-..|.
T Consensus 80 ~~~~g~iD~lvnnAg~ 95 (280)
T 3tox_A 80 VRRFGGLDTAFNNAGA 95 (280)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 764 78888887774
No 337
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=44.81 E-value=77 Score=26.77 Aligned_cols=72 Identities=13% Similarity=0.088 Sum_probs=45.7
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhh---cCCCCEEEEECCChHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVF---DKYPNMIVVDYTVPAAVNGNAEL 77 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~---~~~~d~VvIDFS~p~~~~~~~~~ 77 (264)
+|+.+++.+.+.|..++.. ++... .+++...++. ......+..|.|.++.+...++.
T Consensus 39 IG~aia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 98 (277)
T 4fc7_A 39 IGFRIAEIFMRHGCHTVIA-SRSLP-------------------RVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQ 98 (277)
T ss_dssp HHHHHHHHHHTTTCEEEEE-ESCHH-------------------HHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 4888998888888887743 32210 1111112111 11222345799999999999988
Q ss_pred HHhc--CCCeEEecCCC
Q 024671 78 YSKV--GVPFVMGTTGG 92 (264)
Q Consensus 78 ~~~~--g~plViGTTG~ 92 (264)
+.+. ++.+||-..|.
T Consensus 99 ~~~~~g~id~lv~nAg~ 115 (277)
T 4fc7_A 99 ALKEFGRIDILINCAAG 115 (277)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCcC
Confidence 8775 78899988874
No 338
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2
Probab=44.76 E-value=38 Score=31.13 Aligned_cols=48 Identities=13% Similarity=0.086 Sum_probs=39.9
Q ss_pred CCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEecC
Q 024671 43 LSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT 90 (264)
Q Consensus 43 ~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGTT 90 (264)
++++.+.|+...+...-+-.+.+.+-+.+...++.|.+.+.|+++.++
T Consensus 17 ~~~~~~ll~~A~~~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s 64 (357)
T 3qm3_A 17 GDELNKIYDYAKAEGFAIPAVNVVGTDSINAVLEAAKKVNSPVIIQFS 64 (357)
T ss_dssp GGGHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHHTSCEEEEEC
T ss_pred HHHHHHHHHHHHHcCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcC
Confidence 467777777666556665689999999999999999999999999876
No 339
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=44.68 E-value=76 Score=27.73 Aligned_cols=91 Identities=10% Similarity=0.072 Sum_probs=52.0
Q ss_pred ChHHHHHHHHhCC----CeEEEEEcCCCc-cccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHH
Q 024671 1 MGKAVIKAADAAG----LELVPVSFGTEE-ESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNA 75 (264)
Q Consensus 1 MG~~i~~~~~~~~----~eLv~~~~~~~~-~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~ 75 (264)
||..++..+.+.| +++.. +++.+. ..-+.+ ...|+.+. .+..+++. .+| +||=...|..+.+.+
T Consensus 33 mG~ala~~L~~~G~~~~~~V~v-~~r~~~~~~~~~l--~~~G~~~~--~~~~e~~~-----~aD-vVilav~~~~~~~vl 101 (322)
T 2izz_A 33 LAFALAKGFTAAGVLAAHKIMA-SSPDMDLATVSAL--RKMGVKLT--PHNKETVQ-----HSD-VLFLAVKPHIIPFIL 101 (322)
T ss_dssp HHHHHHHHHHHTTSSCGGGEEE-ECSCTTSHHHHHH--HHHTCEEE--SCHHHHHH-----HCS-EEEECSCGGGHHHHH
T ss_pred HHHHHHHHHHHCCCCCcceEEE-ECCCccHHHHHHH--HHcCCEEe--CChHHHhc-----cCC-EEEEEeCHHHHHHHH
Confidence 7899998887777 67653 444321 000111 11234432 23333333 478 677777788888888
Q ss_pred HHHHhc---CCCeEEecCCCCHHHHHHHHH
Q 024671 76 ELYSKV---GVPFVMGTTGGDRVRLHETIE 102 (264)
Q Consensus 76 ~~~~~~---g~plViGTTG~~~~~~~~l~~ 102 (264)
+..... +..+|.-++|++.+.++++..
T Consensus 102 ~~l~~~l~~~~ivvs~s~gi~~~~l~~~l~ 131 (322)
T 2izz_A 102 DEIGADIEDRHIVVSCAAGVTISSIEKKLS 131 (322)
T ss_dssp HHHGGGCCTTCEEEECCTTCCHHHHHHHHH
T ss_pred HHHHhhcCCCCEEEEeCCCCCHHHHHHHHh
Confidence 765432 444666668998776665433
No 340
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=44.64 E-value=1.3e+02 Score=24.78 Aligned_cols=39 Identities=8% Similarity=0.152 Sum_probs=24.7
Q ss_pred HhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEe
Q 024671 50 LASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMG 88 (264)
Q Consensus 50 l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViG 88 (264)
+..+....+|.++|--+.++...+.++.+.+.|+|+|.-
T Consensus 50 i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~ 88 (283)
T 2ioy_A 50 VEDLIQQKVDVLLINPVDSDAVVTAIKEANSKNIPVITI 88 (283)
T ss_dssp HHHHHHTTCSEEEECCSSTTTTHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHcCCCEEEEeCCchhhhHHHHHHHHHCCCeEEEe
Confidence 333344578855553334455556778888899998764
No 341
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=44.63 E-value=1.4e+02 Score=25.23 Aligned_cols=40 Identities=13% Similarity=0.244 Sum_probs=26.6
Q ss_pred HhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEec
Q 024671 50 LASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGT 89 (264)
Q Consensus 50 l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGT 89 (264)
+..+....+|.+++--+.++.+.+.++.+.+.++|+|+--
T Consensus 55 i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 94 (325)
T 2x7x_A 55 VHYFMDEGVDLLIISANEAAPMTPIVEEAYQKGIPVILVD 94 (325)
T ss_dssp HHHHHHTTCSEEEECCSSHHHHHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHcCCCEEEEeCCCHHHHHHHHHHHHHCCCeEEEeC
Confidence 3444445789655555555555677888888999987643
No 342
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=44.50 E-value=53 Score=28.34 Aligned_cols=80 Identities=15% Similarity=0.086 Sum_probs=42.3
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCC-hHHHHHHHHHH-
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTV-PAAVNGNAELY- 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~-p~~~~~~~~~~- 78 (264)
||+.+++.+.+.|+++.. +++.+... +.+ ...++.+. .++++++. .+| +||-.+. |..+.+.+...
T Consensus 41 mG~~~a~~l~~~g~~V~~-~~~~~~~~-~~~--~~~g~~~~--~~~~~~~~-----~~D-vVi~av~~~~~~~~v~~~~~ 108 (316)
T 2uyy_A 41 MGSGIVSNLLKMGHTVTV-WNRTAEKC-DLF--IQEGARLG--RTPAEVVS-----TCD-ITFACVSDPKAAKDLVLGPS 108 (316)
T ss_dssp HHHHHHHHHHHTTCCEEE-ECSSGGGG-HHH--HHTTCEEC--SCHHHHHH-----HCS-EEEECCSSHHHHHHHHHSTT
T ss_pred HHHHHHHHHHhCCCEEEE-EeCCHHHH-HHH--HHcCCEEc--CCHHHHHh-----cCC-EEEEeCCCHHHHHHHHcCch
Confidence 788999888777888753 45433211 111 11123332 34444443 478 5666665 77777766532
Q ss_pred -----HhcCCCeEEecCCC
Q 024671 79 -----SKVGVPFVMGTTGG 92 (264)
Q Consensus 79 -----~~~g~plViGTTG~ 92 (264)
...+..+|..+|+.
T Consensus 109 ~~~~~l~~~~~vv~~s~~~ 127 (316)
T 2uyy_A 109 GVLQGIRPGKCYVDMSTVD 127 (316)
T ss_dssp CGGGGCCTTCEEEECSCCC
T ss_pred hHhhcCCCCCEEEECCCCC
Confidence 23455555555544
No 343
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=44.28 E-value=1.3e+02 Score=24.67 Aligned_cols=71 Identities=18% Similarity=0.212 Sum_probs=47.0
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
+|+.+++.+.+.|..++.. ++.. +.+++...++ ......+..|+|.++.+.+.++.+.+
T Consensus 21 IG~~~a~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (261)
T 3n74_A 21 FGEGMAKRFAKGGAKVVIV-DRDK-------------------AGAERVAGEI-GDAALAVAADISKEADVDAAVEAALS 79 (261)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHHHH-CTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-cCCH-------------------HHHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 4889998888889887753 3221 1122222221 11222457899999999999988876
Q ss_pred c--CCCeEEecCCC
Q 024671 81 V--GVPFVMGTTGG 92 (264)
Q Consensus 81 ~--g~plViGTTG~ 92 (264)
. ++.+||-..|.
T Consensus 80 ~~g~id~li~~Ag~ 93 (261)
T 3n74_A 80 KFGKVDILVNNAGI 93 (261)
T ss_dssp HHSCCCEEEECCCC
T ss_pred hcCCCCEEEECCcc
Confidence 5 78899988875
No 344
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=44.25 E-value=69 Score=26.38 Aligned_cols=72 Identities=13% Similarity=-0.014 Sum_probs=47.0
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
+|+.+++.+.+.|..++.. ++... .+++....+. .....+..|+|.++.+...++.+.+
T Consensus 15 IG~a~a~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~ 73 (235)
T 3l6e_A 15 LGRALTIGLVERGHQVSMM-GRRYQ-------------------RLQQQELLLG-NAVIGIVADLAHHEDVDVAFAAAVE 73 (235)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHG-GGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECCHH-------------------HHHHHHHHhc-CCceEEECCCCCHHHHHHHHHHHHH
Confidence 4889999888889987753 33211 1122112111 1223357899999999999988776
Q ss_pred c--CCCeEEecCCCC
Q 024671 81 V--GVPFVMGTTGGD 93 (264)
Q Consensus 81 ~--g~plViGTTG~~ 93 (264)
. ++.+||-..|..
T Consensus 74 ~~g~id~lvnnAg~~ 88 (235)
T 3l6e_A 74 WGGLPELVLHCAGTG 88 (235)
T ss_dssp HHCSCSEEEEECCCC
T ss_pred hcCCCcEEEECCCCC
Confidence 4 688898888863
No 345
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=44.04 E-value=24 Score=31.49 Aligned_cols=32 Identities=13% Similarity=0.075 Sum_probs=18.5
Q ss_pred CCCEEEEECCC-hHHHHHHHHHHHhc-CCCeEEec
Q 024671 57 YPNMIVVDYTV-PAAVNGNAELYSKV-GVPFVMGT 89 (264)
Q Consensus 57 ~~d~VvIDFS~-p~~~~~~~~~~~~~-g~plViGT 89 (264)
.+| ++||.+- ++.+...++.+... |.=+++|.
T Consensus 265 g~D-vvid~~G~~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 265 GVD-YSLDCAGTAQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp CBS-EEEESSCCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred Ccc-EEEECCCCHHHHHHHHHHhhcCCCEEEEECC
Confidence 467 6777774 45555555555445 55455554
No 346
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=43.76 E-value=94 Score=25.83 Aligned_cols=89 Identities=10% Similarity=0.088 Sum_probs=47.3
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCC-CccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGT-EEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~-~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (264)
||+.+++.+.+.|+++.. .++. ....-+.+ ...++. .++++++. .+| +||=...|....+.+....
T Consensus 11 mG~~la~~l~~~g~~V~~-~~~~~~~~~~~~~--~~~g~~----~~~~~~~~-----~aD-vvi~~v~~~~~~~~~~~~~ 77 (264)
T 1i36_A 11 VAQTLASRLRSRGVEVVT-SLEGRSPSTIERA--RTVGVT----ETSEEDVY-----SCP-VVISAVTPGVALGAARRAG 77 (264)
T ss_dssp HHHHHHHHHHHTTCEEEE-CCTTCCHHHHHHH--HHHTCE----ECCHHHHH-----TSS-EEEECSCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEE-eCCccCHHHHHHH--HHCCCc----CCHHHHHh-----cCC-EEEEECCCHHHHHHHHHHH
Confidence 799999888888898875 3431 10000111 011222 23334332 578 6676666655555555554
Q ss_pred hcCCCeEEecCCCCHHHHHHHHH
Q 024671 80 KVGVPFVMGTTGGDRVRLHETIE 102 (264)
Q Consensus 80 ~~g~plViGTTG~~~~~~~~l~~ 102 (264)
+.-.++|+=+++.+....+.+.+
T Consensus 78 ~~~~~~vi~~s~~~~~~~~~l~~ 100 (264)
T 1i36_A 78 RHVRGIYVDINNISPETVRMASS 100 (264)
T ss_dssp TTCCSEEEECSCCCHHHHHHHHH
T ss_pred HhcCcEEEEccCCCHHHHHHHHH
Confidence 43333777677776654444443
No 347
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=43.65 E-value=13 Score=33.87 Aligned_cols=83 Identities=22% Similarity=0.248 Sum_probs=45.8
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCCccc------------cc-----cc-cccCceeEeecCCchhhHHhhhhcCCCCEE
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTEEES------------GQ-----KV-EVCGKEIQVHGLSDRESVLASVFDKYPNMI 61 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~~~~------------g~-----~~-~~~~~~i~i~~~~dl~~~l~~~~~~~~d~V 61 (264)
+||.+++++. +++++|++..+..+... |+ .+ ...+..+.+. .+.++.+ ..+| +
T Consensus 13 IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v~--~~~~~~~-----~~vD-i 84 (343)
T 2yyy_A 13 IGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPVE--GTILDII-----EDAD-I 84 (343)
T ss_dssp HHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCCC--CBGGGTG-----GGCS-E
T ss_pred HHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEEC--CchHHhc-----cCCC-E
Confidence 4899999887 57899998766322110 11 00 0001112221 1222221 2578 6
Q ss_pred EEECCChHHHHHHHH-HHHhcCCCeEEecCCC
Q 024671 62 VVDYTVPAAVNGNAE-LYSKVGVPFVMGTTGG 92 (264)
Q Consensus 62 vIDFS~p~~~~~~~~-~~~~~g~plViGTTG~ 92 (264)
+++-|-.....+..+ .+++.|+++|+ +.+.
T Consensus 85 V~eatg~~~s~~~a~~~~l~aG~~VI~-sap~ 115 (343)
T 2yyy_A 85 VVDGAPKKIGKQNLENIYKPHKVKAIL-QGGE 115 (343)
T ss_dssp EEECCCTTHHHHHHHHTTTTTTCEEEE-CTTS
T ss_pred EEECCCccccHHHHHHHHHHCCCEEEE-CCCc
Confidence 777665565588885 88899987555 4443
No 348
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=43.57 E-value=23 Score=29.71 Aligned_cols=90 Identities=12% Similarity=0.060 Sum_probs=51.8
Q ss_pred ChHHHHHHHHhCCC----eEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHH
Q 024671 1 MGKAVIKAADAAGL----ELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAE 76 (264)
Q Consensus 1 MG~~i~~~~~~~~~----eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~ 76 (264)
||+.+++.+.+.|+ ++.. .++.+.... .+ ....++.+ ..+.++++. .+| +||=...|..+.+.++
T Consensus 13 mG~~~a~~l~~~g~~~~~~V~~-~~r~~~~~~-~~-~~~~g~~~--~~~~~e~~~-----~aD-vVilav~~~~~~~v~~ 81 (247)
T 3gt0_A 13 MGMAMIGGMINKNIVSSNQIIC-SDLNTANLK-NA-SEKYGLTT--TTDNNEVAK-----NAD-ILILSIKPDLYASIIN 81 (247)
T ss_dssp HHHHHHHHHHHTTSSCGGGEEE-ECSCHHHHH-HH-HHHHCCEE--CSCHHHHHH-----HCS-EEEECSCTTTHHHHC-
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EeCCHHHHH-HH-HHHhCCEE--eCChHHHHH-----hCC-EEEEEeCHHHHHHHHH
Confidence 78999988887787 7663 454332110 00 00113333 245555443 478 6777778888888776
Q ss_pred HHHh---cCCCeEEecCCCCHHHHHHHH
Q 024671 77 LYSK---VGVPFVMGTTGGDRVRLHETI 101 (264)
Q Consensus 77 ~~~~---~g~plViGTTG~~~~~~~~l~ 101 (264)
.... .+..+|.-+.|.+.+.++...
T Consensus 82 ~l~~~l~~~~~vvs~~~gi~~~~l~~~~ 109 (247)
T 3gt0_A 82 EIKEIIKNDAIIVTIAAGKSIESTENAF 109 (247)
T ss_dssp --CCSSCTTCEEEECSCCSCHHHHHHHH
T ss_pred HHHhhcCCCCEEEEecCCCCHHHHHHHh
Confidence 6543 244455578889887776654
No 349
>3ks9_A Mglur1, metabotropic glutamate receptor 1; glutamate receptors, dimerization, glutamic acid BIN structural genomics, structural genomics consortium; HET: Z99 NAG; 1.90A {Homo sapiens} SCOP: c.93.1.1 PDB: 1ewk_A* 1ewt_A* 1ewv_A 1isr_A* 1iss_A* 3lmk_A*
Probab=43.51 E-value=90 Score=28.95 Aligned_cols=49 Identities=18% Similarity=0.303 Sum_probs=35.6
Q ss_pred chhhHHhhhhcC--CCCEEEEECCChHHHHHHHHHHHhcCCC---eEEecCCCCH
Q 024671 45 DRESVLASVFDK--YPNMIVVDYTVPAAVNGNAELYSKVGVP---FVMGTTGGDR 94 (264)
Q Consensus 45 dl~~~l~~~~~~--~~d~VvIDFS~p~~~~~~~~~~~~~g~p---lViGTTG~~~ 94 (264)
|....+..+... .++ |+|-|..+..+...++.+.+.|.. ..+||.||+.
T Consensus 242 d~~~~l~~i~~~~~~a~-vii~~~~~~~~~~l~~~~~~~g~~~k~~~i~s~~w~~ 295 (496)
T 3ks9_A 242 SFDRLLRKLRERLPKAR-VVVCFCEGMTVRGLLSAMRRLGVVGEFSLIGSDGWAD 295 (496)
T ss_dssp HHHHHHHHHHTTTTTTC-EEEEECCHHHHHHHHHHHHHHTCCSCCEEEECTTTTT
T ss_pred HHHHHHHHHHhccCceE-EEEEecChHHHHHHHHHHHHhCCCCcEEEEEechhcc
Confidence 444445555443 456 688888888888889999898876 5699999964
No 350
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=43.41 E-value=87 Score=22.35 Aligned_cols=71 Identities=11% Similarity=0.181 Sum_probs=36.8
Q ss_pred chhhHHhhhhcC-CCCEEEEECCChHH-HHHHHHHHHhc----CCCeEEecCCCCHHHHHHHHHccCCcEEEccchhH
Q 024671 45 DRESVLASVFDK-YPNMIVVDYTVPAA-VNGNAELYSKV----GVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 45 dl~~~l~~~~~~-~~d~VvIDFS~p~~-~~~~~~~~~~~----g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSl 116 (264)
+..+++..+... .+|.|++|...|.. -.+.++...+. .+|+|+=|.--+.+...... ..+.--++.-.++.
T Consensus 38 ~~~~a~~~~~~~~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~-~~g~~~~l~KP~~~ 114 (129)
T 3h1g_A 38 HGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAEGGKAEVITAL-KAGVNNYIVKPFTP 114 (129)
T ss_dssp SHHHHHHHHHHCTTCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESCCSHHHHHHHH-HHTCCEEEESCCCH
T ss_pred CHHHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCCCChHHHHHHH-HcCccEEEeCCCCH
Confidence 334444444333 58977889998863 34555555542 46766655433443333332 33443344444554
No 351
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=43.37 E-value=11 Score=33.62 Aligned_cols=18 Identities=33% Similarity=0.490 Sum_probs=12.0
Q ss_pred ChHHHHHHHHhCCCeEEE
Q 024671 1 MGKAVIKAADAAGLELVP 18 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~ 18 (264)
+|..+++.+...|.++++
T Consensus 180 iG~~~~~~a~~~Ga~Vi~ 197 (353)
T 4dup_A 180 IGTTAIQLARAFGAEVYA 197 (353)
T ss_dssp HHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHcCCEEEE
Confidence 367777777767777654
No 352
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=43.20 E-value=62 Score=26.84 Aligned_cols=72 Identities=17% Similarity=0.168 Sum_probs=45.8
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCC--CCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKY--PNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~--~d~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|.+++.. ++... .+++..+++.... ...+..|.|.++.+.+.++.+
T Consensus 14 IG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 73 (256)
T 1geg_A 14 IGKAIALRLVKDGFAVAIA-DYNDA-------------------TAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQA 73 (256)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 4889999888889887753 33211 1111112211111 223457999999999998877
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 74 ~~~~g~id~lv~nAg~ 89 (256)
T 1geg_A 74 RKTLGGFDVIVNNAGV 89 (256)
T ss_dssp HHHTTCCCEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 664 68899988875
No 353
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=43.20 E-value=65 Score=28.71 Aligned_cols=50 Identities=10% Similarity=0.177 Sum_probs=35.5
Q ss_pred EEEEC--CChHHHHHHHHHHHhcCCC-eEEecCCCC--HHHH----HHHHHccCCcEEE
Q 024671 61 IVVDY--TVPAAVNGNAELYSKVGVP-FVMGTTGGD--RVRL----HETIENSNVYAVI 110 (264)
Q Consensus 61 VvIDF--S~p~~~~~~~~~~~~~g~p-lViGTTG~~--~~~~----~~l~~~~~~~~v~ 110 (264)
++||= ..++...+.++.+++.|.. +.|||||.+ .+.+ +.+++...+|+++
T Consensus 43 ~liDPdK~~~~~~~~~~~~~~~sGtDai~VGS~~vt~~~~~~~~~v~~ik~~~~lPvil 101 (286)
T 3vk5_A 43 HIIDPFKVPVTEAVEKAAELTRLGFAAVLLASTDYESFESHMEPYVAAVKAATPLPVVL 101 (286)
T ss_dssp EEECTTTSCHHHHHHHHHHHHHTTCSCEEEECSCCSSHHHHHHHHHHHHHHHCSSCEEE
T ss_pred EEECCCCCCcHHHHHHHHHHHhcCCCEEEEccCCCCcchHHHHHHHHHHHHhCCCCEEE
Confidence 67775 3466666778888888875 778999998 6543 3455556789877
No 354
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=43.19 E-value=1.4e+02 Score=24.69 Aligned_cols=41 Identities=20% Similarity=0.205 Sum_probs=27.1
Q ss_pred HhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEecC
Q 024671 50 LASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT 90 (264)
Q Consensus 50 l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGTT 90 (264)
+..+....+|.+++--+.+....+.++.+.+.|+|+|.--+
T Consensus 52 ~~~~~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~ 92 (309)
T 2fvy_A 52 IDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPVVFFNK 92 (309)
T ss_dssp HHHHHHTTCSEEEECCSSGGGHHHHHHHHHTTTCCEEEESS
T ss_pred HHHHHHcCCCEEEEeCCCcchhHHHHHHHHHCCCcEEEecC
Confidence 34444457896566444555566778888889999886433
No 355
>3bre_A Probable two-component response regulator; protein-nucleotide complex, signaling protein; HET: C2E; 2.40A {Pseudomonas aeruginosa} PDB: 3i5a_A*
Probab=43.11 E-value=65 Score=27.91 Aligned_cols=59 Identities=19% Similarity=0.250 Sum_probs=36.9
Q ss_pred eeEeecCCchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHhc----CCCeEEecCCCCHHH
Q 024671 37 EIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSKV----GVPFVMGTTGGDRVR 96 (264)
Q Consensus 37 ~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~~----g~plViGTTG~~~~~ 96 (264)
++.+....+.++++..+....||.|++|...|.. -.+.++...+. .+|+|+ .||.+..+
T Consensus 43 ~~~v~~~~~~~~al~~~~~~~~dlvl~D~~mp~~~G~~~~~~l~~~~~~~~~~ii~-~s~~~~~~ 106 (358)
T 3bre_A 43 GIDFHFCSDPQQAVAVANQIKPTVILQDLVMPGVDGLTLLAAYRGNPATRDIPIIV-LSTKEEPT 106 (358)
T ss_dssp TEEEEEECCHHHHHHHHHHHCCSEEEEESBCSSSBHHHHHHHHTTSTTTTTSCEEE-EESSCCHH
T ss_pred CcEEEEeCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHhcCcccCCCcEEE-EeCCCCHH
Confidence 3444445677777776666679988999999852 24555555442 356655 45665443
No 356
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=43.06 E-value=63 Score=27.14 Aligned_cols=72 Identities=15% Similarity=0.067 Sum_probs=44.6
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCC--CCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKY--PNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~--~d~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|.+++.. ++... .+++...++.... ...+..|++.++.+.+.++.+
T Consensus 43 IG~~la~~L~~~G~~V~~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 102 (272)
T 1yb1_A 43 IGRLTAYEFAKLKSKLVLW-DINKH-------------------GLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKV 102 (272)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-EcCHH-------------------HHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHH
Confidence 3788888887778887643 32210 1111112211111 223567999999999988877
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 103 ~~~~g~iD~li~~Ag~ 118 (272)
T 1yb1_A 103 KAEIGDVSILVNNAGV 118 (272)
T ss_dssp HHHTCCCSEEEECCCC
T ss_pred HHHCCCCcEEEECCCc
Confidence 653 68899988885
No 357
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=42.93 E-value=51 Score=30.15 Aligned_cols=76 Identities=17% Similarity=0.181 Sum_probs=47.3
Q ss_pred EEEE--CCChHHHHHHHHHHHhcCCCeEE--ecCCCC--HH-----HHHHHHHcc-CCcEEEccchhHHHHHHHHHHHHH
Q 024671 61 IVVD--YTVPAAVNGNAELYSKVGVPFVM--GTTGGD--RV-----RLHETIENS-NVYAVISPQMGKQVVAFLAAMEIM 128 (264)
Q Consensus 61 VvID--FS~p~~~~~~~~~~~~~g~plVi--GTTG~~--~~-----~~~~l~~~~-~~~~v~s~NfSlGv~ll~~~~~~a 128 (264)
|++- .++.+-....++++.+.|.++++ ||++|. .+ .+..+.+.. +.|+.+ |-=+.|..+ .+ +
T Consensus 151 viLstGmat~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpVg~-sdHt~G~~~--~~---A 224 (349)
T 2wqp_A 151 IILSTGMNSIESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGL-SDHTLDNYA--CL---G 224 (349)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEEEE-ECCSSSSHH--HH---H
T ss_pred EEEECCCCCHHHHHHHHHHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCEEe-CCCCCcHHH--HH---H
Confidence 5665 34556666677777777778888 888883 22 356677777 788877 455566322 22 2
Q ss_pred HHhcCCCCCCCCEEEEeecCC
Q 024671 129 AEQFPGAFSGYSLQVLESHQA 149 (264)
Q Consensus 129 a~~l~~~~~~~dieI~E~HH~ 149 (264)
|=.++ .| |||.|-.
T Consensus 225 AvAlG-----A~--iIEkH~t 238 (349)
T 2wqp_A 225 AVALG-----GS--ILERHFT 238 (349)
T ss_dssp HHHHT-----CC--EEEEEBC
T ss_pred HHHhC-----CC--EEEeCCC
Confidence 22332 35 9999953
No 358
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=42.83 E-value=37 Score=31.05 Aligned_cols=84 Identities=18% Similarity=0.119 Sum_probs=47.0
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcC--CCc--------------cc------cccccccCceeEeecCCchhhHHhhhhcCC
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFG--TEE--------------ES------GQKVEVCGKEIQVHGLSDRESVLASVFDKY 57 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~--~~~--------------~~------g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~ 57 (264)
+||.+.+++. ++++|+|+.-++ ..+ .. +..+.+.+..+.+....|.++. + ..+..
T Consensus 22 IGr~v~ra~~~~~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~~~v~~~~~~l~v~Gk~i~v~~~~dp~~~-~-w~~~g 99 (345)
T 2b4r_O 22 IGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQI-P-WGKCQ 99 (345)
T ss_dssp HHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSGGGC-C-HHHHT
T ss_pred HHHHHHHHHhhCCCcEEEEEcCCCCChHHHHHHhccCCCCCcCCCCEEEcCCEEEECCEEEEEEEcCCcccC-c-ccccC
Confidence 4899999987 688999987651 111 00 1111222334555433232221 0 11125
Q ss_pred CCEEEEECCChHHHHHHHHHHHhcCCC-eEE
Q 024671 58 PNMIVVDYTVPAAVNGNAELYSKVGVP-FVM 87 (264)
Q Consensus 58 ~d~VvIDFS~p~~~~~~~~~~~~~g~p-lVi 87 (264)
.| ++++-|-.....+.....++.|.. +||
T Consensus 100 vD-iV~estG~f~s~e~a~~hl~aGakkVVI 129 (345)
T 2b4r_O 100 VD-VVCESTGVFLTKELASSHLKGGAKKVIM 129 (345)
T ss_dssp CS-EEEECSSSCCSHHHHTHHHHTTCSEEEE
T ss_pred CC-EEEECcCccccHhhHHHHHHCCCCEEEE
Confidence 78 789876666666777777777876 455
No 359
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=42.81 E-value=90 Score=27.05 Aligned_cols=51 Identities=10% Similarity=-0.068 Sum_probs=27.4
Q ss_pred CChHHHHHHHHHHHhcCCC--eEEec--------C--CCCHHH----HHHHHHccCCcEE--EccchhH
Q 024671 66 TVPAAVNGNAELYSKVGVP--FVMGT--------T--GGDRVR----LHETIENSNVYAV--ISPQMGK 116 (264)
Q Consensus 66 S~p~~~~~~~~~~~~~g~p--lViGT--------T--G~~~~~----~~~l~~~~~~~~v--~s~NfSl 116 (264)
..++...+.++.+.+.|.. +.+.- . |.+.+. ++.+.+..++|++ ++||++.
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~~~~ 171 (311)
T 1jub_A 103 MSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYFDL 171 (311)
T ss_dssp SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCCSH
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCCCCH
Confidence 3667777777777777655 33321 1 224433 3334444456764 4788754
No 360
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=42.70 E-value=37 Score=29.63 Aligned_cols=35 Identities=11% Similarity=-0.066 Sum_probs=16.1
Q ss_pred CCCEEEEECCChHHHHHHHHHHHhcCCCeEEecCCC
Q 024671 57 YPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGG 92 (264)
Q Consensus 57 ~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGTTG~ 92 (264)
.+| .+||++..+.....-...-..+..+|+=|+|.
T Consensus 205 Ga~-~~i~~~~~~~~~~~~~~~~~~g~d~v~d~~G~ 239 (346)
T 4a2c_A 205 GAM-QTFNSSEMSAPQMQSVLRELRFNQLILETAGV 239 (346)
T ss_dssp TCS-EEEETTTSCHHHHHHHHGGGCSSEEEEECSCS
T ss_pred CCe-EEEeCCCCCHHHHHHhhcccCCcccccccccc
Confidence 455 45666554433222222222445566666654
No 361
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=42.60 E-value=77 Score=24.23 Aligned_cols=74 Identities=16% Similarity=0.175 Sum_probs=41.9
Q ss_pred CCchhhHHhhhhcCCCCEEEEECCChHHH-HHHHHHHHh----cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHH
Q 024671 43 LSDRESVLASVFDKYPNMIVVDYTVPAAV-NGNAELYSK----VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQ 117 (264)
Q Consensus 43 ~~dl~~~l~~~~~~~~d~VvIDFS~p~~~-~~~~~~~~~----~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlG 117 (264)
.++-+++++.+....||.|+.|..-|.-- .+.++...+ ..+|+|+-|+--+.+...+.. .++.--+++=.|+..
T Consensus 43 a~~g~~al~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~~~~~~~~~~-~~Ga~~yl~KP~~~~ 121 (134)
T 3to5_A 43 ADDGLTALPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEAKREQIIEAA-QAGVNGYIVKPFTAA 121 (134)
T ss_dssp ESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSCCHHHHHHHH-HTTCCEEEESSCCHH
T ss_pred ECCHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCCCHHHHHHHH-HCCCCEEEECCCCHH
Confidence 34556667766667899889999999521 333333332 357776665433444443333 345433444446654
No 362
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=42.58 E-value=70 Score=27.48 Aligned_cols=71 Identities=11% Similarity=0.061 Sum_probs=46.8
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+++++...+.|..++. ++... +.++++.+++.....+ .+..|.|.++.+...++.+
T Consensus 19 IG~aiA~~la~~Ga~Vv~-~~~~~-------------------~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~ 78 (254)
T 4fn4_A 19 IGRAIAKKFALNDSIVVA-VELLE-------------------DRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRT 78 (254)
T ss_dssp HHHHHHHHHHHTTCEEEE-EESCH-------------------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEE-EECCH-------------------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 589999888888988774 33321 1223333333322333 3567999999999999998
Q ss_pred Hhc--CCCeEEecCC
Q 024671 79 SKV--GVPFVMGTTG 91 (264)
Q Consensus 79 ~~~--g~plViGTTG 91 (264)
.+. ++.++|--.|
T Consensus 79 ~~~~G~iDiLVNNAG 93 (254)
T 4fn4_A 79 FETYSRIDVLCNNAG 93 (254)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCc
Confidence 874 6778885555
No 363
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=42.53 E-value=61 Score=26.99 Aligned_cols=76 Identities=9% Similarity=0.055 Sum_probs=46.6
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
+|+.+++.+.+.|..++.. ++.... . +.+++...+........+..|+|.++.+.+.++.+.+
T Consensus 21 IG~~ia~~l~~~G~~V~~~-~r~~~~--~--------------~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 21 IAWGIARSLHEAGARLIFT-YAGERL--E--------------KSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSGGG--H--------------HHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEe-cCchHH--H--------------HHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 3888998888889887743 322110 0 0111111111111233457899999999999998877
Q ss_pred c--CCCeEEecCCCC
Q 024671 81 V--GVPFVMGTTGGD 93 (264)
Q Consensus 81 ~--g~plViGTTG~~ 93 (264)
. ++.+|+-..|..
T Consensus 84 ~~g~id~li~~Ag~~ 98 (266)
T 3oig_A 84 QVGVIHGIAHCIAFA 98 (266)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HhCCeeEEEEccccc
Confidence 4 678888887753
No 364
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=42.40 E-value=81 Score=25.85 Aligned_cols=72 Identities=17% Similarity=0.146 Sum_probs=44.5
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCC--CCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKY--PNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~--~d~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|.+++.. ++... .+++..+.+.... ...+..|++.++.+.+.++.+
T Consensus 25 iG~~la~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~ 84 (260)
T 3awd_A 25 IGLACVTALAEAGARVIIA-DLDEA-------------------MATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSV 84 (260)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 3888888888888887753 32210 1111112211112 223567999999999888876
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+|+-..|.
T Consensus 85 ~~~~~~id~vi~~Ag~ 100 (260)
T 3awd_A 85 HEQEGRVDILVACAGI 100 (260)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 653 68888887774
No 365
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=42.39 E-value=15 Score=32.96 Aligned_cols=85 Identities=14% Similarity=0.189 Sum_probs=38.5
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccc--cccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEES--GQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~--g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
+|..+++.+...|.++++ +++.+... -+..+. ..-+.. ...++.+.+.+.....+| ++||.+..+.+...++.+
T Consensus 176 iG~~~~q~a~~~Ga~Vi~-~~~~~~~~~~~~~~Ga-~~~~~~-~~~~~~~~~~~~~~~g~D-~vid~~g~~~~~~~~~~l 251 (362)
T 2c0c_A 176 TGQFAMQLSKKAKCHVIG-TCSSDEKSAFLKSLGC-DRPINY-KTEPVGTVLKQEYPEGVD-VVYESVGGAMFDLAVDAL 251 (362)
T ss_dssp THHHHHHHHHHTTCEEEE-EESSHHHHHHHHHTTC-SEEEET-TTSCHHHHHHHHCTTCEE-EEEECSCTHHHHHHHHHE
T ss_pred HHHHHHHHHHhCCCEEEE-EECCHHHHHHHHHcCC-cEEEec-CChhHHHHHHHhcCCCCC-EEEECCCHHHHHHHHHHH
Confidence 477888887777877664 33322100 000110 000111 112333333322222356 677777665555555555
Q ss_pred HhcCCCeEEec
Q 024671 79 SKVGVPFVMGT 89 (264)
Q Consensus 79 ~~~g~plViGT 89 (264)
...|.=+.+|.
T Consensus 252 ~~~G~iv~~g~ 262 (362)
T 2c0c_A 252 ATKGRLIVIGF 262 (362)
T ss_dssp EEEEEEEECCC
T ss_pred hcCCEEEEEeC
Confidence 55554444454
No 366
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=42.35 E-value=59 Score=30.53 Aligned_cols=88 Identities=18% Similarity=0.179 Sum_probs=47.1
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccc-c----CceeEeecCCchhhHHhhhhcCCCCEEEEECCCh-HHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEV-C----GKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVP-AAVNGN 74 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~-~----~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p-~~~~~~ 74 (264)
||+.++..+.+.|+++. +.++.+......... + +..+.. ..++++++.++ ..+| +||=...+ ..+.+.
T Consensus 12 mG~~lA~~La~~G~~V~-v~dr~~~~~~~l~~~~g~~~~~~~i~~--~~~~~e~v~~l--~~aD-vVilaVp~~~~v~~v 85 (478)
T 1pgj_A 12 MGANLALNIAEKGFKVA-VFNRTYSKSEEFMKANASAPFAGNLKA--FETMEAFAASL--KKPR-KALILVQAGAATDST 85 (478)
T ss_dssp HHHHHHHHHHHTTCCEE-EECSSHHHHHHHHHHTTTSTTGGGEEE--CSCHHHHHHHB--CSSC-EEEECCCCSHHHHHH
T ss_pred HHHHHHHHHHHCCCEEE-EEeCCHHHHHHHHHhcCCCCCCCCeEE--ECCHHHHHhcc--cCCC-EEEEecCChHHHHHH
Confidence 89999988888898875 345432211000000 0 111322 34666554422 1478 45544444 466666
Q ss_pred HHHHH---hcCCCeEEecCCCCH
Q 024671 75 AELYS---KVGVPFVMGTTGGDR 94 (264)
Q Consensus 75 ~~~~~---~~g~plViGTTG~~~ 94 (264)
++... +.+..+|.++||...
T Consensus 86 l~~l~~~l~~g~iIId~sng~~~ 108 (478)
T 1pgj_A 86 IEQLKKVFEKGDILVDTGNAHFK 108 (478)
T ss_dssp HHHHHHHCCTTCEEEECCCCCHH
T ss_pred HHHHHhhCCCCCEEEECCCCChH
Confidence 65433 356677778888743
No 367
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=42.32 E-value=64 Score=27.15 Aligned_cols=73 Identities=14% Similarity=0.200 Sum_probs=46.5
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCC---CCEEEEECCCh-HHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKY---PNMIVVDYTVP-AAVNGNAE 76 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~---~d~VvIDFS~p-~~~~~~~~ 76 (264)
+|+.+++.+.+.|..++.. ++.. +.++++++++.... ...+..|+|.+ +.+...++
T Consensus 24 IG~~~a~~L~~~G~~V~~~-~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~ 83 (311)
T 3o26_A 24 IGFEICKQLSSNGIMVVLT-CRDV-------------------TKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLAD 83 (311)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCH-------------------HHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHH
Confidence 4888888888888887753 3221 11122222222211 22346799999 88888888
Q ss_pred HHHhc--CCCeEEecCCCC
Q 024671 77 LYSKV--GVPFVMGTTGGD 93 (264)
Q Consensus 77 ~~~~~--g~plViGTTG~~ 93 (264)
.+.+. ++.+||-..|..
T Consensus 84 ~~~~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 84 FIKTHFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHHHHSSCCEEEECCCCC
T ss_pred HHHHhCCCCCEEEECCccc
Confidence 77664 789999988863
No 368
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=42.30 E-value=1.3e+02 Score=24.17 Aligned_cols=73 Identities=16% Similarity=0.102 Sum_probs=45.5
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCC--CCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKY--PNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~--~d~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++....+... .++...+++.... ...+..|++.++.+.+.++.+
T Consensus 13 iG~~la~~l~~~G~~v~~~~~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 73 (244)
T 1edo_A 13 IGKAIALSLGKAGCKVLVNYARSAK-------------------AAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTA 73 (244)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHH-------------------HHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCHH-------------------HHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHH
Confidence 4899999988889988764333221 1111111111111 223457999999999888876
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 74 ~~~~g~id~li~~Ag~ 89 (244)
T 1edo_A 74 IDAWGTIDVVVNNAGI 89 (244)
T ss_dssp HHHSSCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 654 68889988875
No 369
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=42.23 E-value=70 Score=27.11 Aligned_cols=76 Identities=11% Similarity=0.097 Sum_probs=42.9
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCch-hhHHhhhhcCCCCEEEEECCCh-----------
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDR-ESVLASVFDKYPNMIVVDYTVP----------- 68 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl-~~~l~~~~~~~~d~VvIDFS~p----------- 68 (264)
.|+.+++.+.+.|+++.+. ++.+... . + .+ +.+... |+ .+.+.++.+ .+| +||.+..+
T Consensus 14 iG~~l~~~L~~~g~~V~~~-~r~~~~~-~-~--~~--~~~~~~-Dl~~~~~~~~~~-~~d-~Vih~a~~~~~~~~~~~~~ 83 (311)
T 3m2p_A 14 LGQYVVESIKNDGNTPIIL-TRSIGNK-A-I--ND--YEYRVS-DYTLEDLINQLN-DVD-AVVHLAATRGSQGKISEFH 83 (311)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCCC---------C--CEEEEC-CCCHHHHHHHTT-TCS-EEEECCCCCCSSSCGGGTH
T ss_pred HHHHHHHHHHhCCCEEEEE-eCCCCcc-c-C--Cc--eEEEEc-cccHHHHHHhhc-CCC-EEEEccccCCCCChHHHHH
Confidence 3889999988889998864 3332111 0 1 11 111100 11 223343333 688 78987643
Q ss_pred ---HHHHHHHHHHHhcCCC-eE
Q 024671 69 ---AAVNGNAELYSKVGVP-FV 86 (264)
Q Consensus 69 ---~~~~~~~~~~~~~g~p-lV 86 (264)
..+...++.|.+.+++ +|
T Consensus 84 ~n~~~~~~ll~a~~~~~~~r~v 105 (311)
T 3m2p_A 84 DNEILTQNLYDACYENNISNIV 105 (311)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHHHcCCCEEE
Confidence 3457788889888887 44
No 370
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=42.18 E-value=74 Score=26.52 Aligned_cols=72 Identities=22% Similarity=0.186 Sum_probs=45.3
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++.. ++.. +.+++...++.....+ .+..|+|.++.+...++.+
T Consensus 19 IG~~ia~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (262)
T 1zem_A 19 IGLATALRLAEEGTAIALL-DMNR-------------------EALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSV 78 (262)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCH-------------------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 4888998888888887743 3221 0112222222111222 3456999999999988887
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 79 ~~~~g~id~lv~nAg~ 94 (262)
T 1zem_A 79 VRDFGKIDFLFNNAGY 94 (262)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 664 68888887775
No 371
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=42.16 E-value=17 Score=32.25 Aligned_cols=23 Identities=22% Similarity=0.316 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHhcCCC--eEEecCC
Q 024671 69 AAVNGNAELYSKVGVP--FVMGTTG 91 (264)
Q Consensus 69 ~~~~~~~~~~~~~g~p--lViGTTG 91 (264)
+++..++++.++.|+. +|.||||
T Consensus 25 ~~l~~lv~~li~~Gv~gl~v~GttG 49 (300)
T 3eb2_A 25 DVMGRLCDDLIQAGVHGLTPLGSTG 49 (300)
T ss_dssp HHHHHHHHHHHHTTCSCBBTTSGGG
T ss_pred HHHHHHHHHHHHcCCCEEEECcccc
Confidence 4555555555555553 3455665
No 372
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=42.09 E-value=33 Score=29.66 Aligned_cols=58 Identities=16% Similarity=0.328 Sum_probs=36.6
Q ss_pred CCCEEEEECCCh--H---HHHHHHHHHHhcCCCeEEecCCCC-----HHHHHHHHHccCCcEEEccchhH
Q 024671 57 YPNMIVVDYTVP--A---AVNGNAELYSKVGVPFVMGTTGGD-----RVRLHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 57 ~~d~VvIDFS~p--~---~~~~~~~~~~~~g~plViGTTG~~-----~~~~~~l~~~~~~~~v~s~NfSl 116 (264)
.+|.++|---.+ + .+...++.+.+.++|+|+=.-|.+ .+....+.+.. +.++.||.+=
T Consensus 56 ~~dalvi~~G~~~~~~~~~~~~~~~~a~~~~~pvVlDpv~~~~~~~~~~~~~~ll~~~--~~vITPN~~E 123 (265)
T 1v8a_A 56 LADAVVINIGTLDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRTRVSLEILSRG--VDVLKGNFGE 123 (265)
T ss_dssp HCSEEEEECTTCCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHHHHHHHHHHHC--CSEEEEEHHH
T ss_pred HCCEEEEEECCCCHHHHHHHHHHHHHHHHcCCcEEEcCccccccccCHHHHHHHHHhC--CcEEcCCHHH
Confidence 467678776554 2 344566777889999998666643 22223333322 7799999764
No 373
>2e4u_A Metabotropic glutamate receptor 3; G-protein-coupled receptor, neuron, central nerve system, SI protein; HET: NAG GLU; 2.35A {Rattus norvegicus} PDB: 2e4v_A* 2e4w_A* 2e4x_A* 2e4y_A*
Probab=41.87 E-value=1.1e+02 Score=28.60 Aligned_cols=49 Identities=12% Similarity=0.114 Sum_probs=34.9
Q ss_pred chhhHHhhhh-cCCCCEEEEECCChHHHHHHHHHHHhcCC-CeEEecCCCCH
Q 024671 45 DRESVLASVF-DKYPNMIVVDYTVPAAVNGNAELYSKVGV-PFVMGTTGGDR 94 (264)
Q Consensus 45 dl~~~l~~~~-~~~~d~VvIDFS~p~~~~~~~~~~~~~g~-plViGTTG~~~ 94 (264)
|....+..+. ...+| |||=|..++.+...++.+.+.|. .+.|+|.+|..
T Consensus 231 ~~~~~l~~i~~~s~a~-vIi~~~~~~~~~~~~~~~~~~g~~~~~i~s~~~~~ 281 (555)
T 2e4u_A 231 SYDSVIRELLQKPNAR-VVVLFMRSDDSRELIAAANRVNASFTWVASDGWGA 281 (555)
T ss_dssp HHHHHHHHHHTCTTCC-EEEEECCHHHHHHHHHHHHHTTCCCEEEECTTTTT
T ss_pred HHHHHHHHHhccCCCC-EEEEEcCHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 4444556653 35789 56668888878888888888765 46789999964
No 374
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=41.84 E-value=1.4e+02 Score=24.98 Aligned_cols=71 Identities=13% Similarity=0.127 Sum_probs=45.3
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcC--CCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDK--YPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~--~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++.. ++.. .++.++++... ....+..|+|.++.+.+.++.+
T Consensus 40 IG~~ia~~l~~~G~~V~~~-~r~~---------------------~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 97 (280)
T 3nrc_A 40 IAYGIAKAMHREGAELAFT-YVGQ---------------------FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVEL 97 (280)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ECTT---------------------CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEe-eCch---------------------HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHH
Confidence 3788888887788877643 2211 01111221111 1234678999999999999988
Q ss_pred Hhc--CCCeEEecCCCC
Q 024671 79 SKV--GVPFVMGTTGGD 93 (264)
Q Consensus 79 ~~~--g~plViGTTG~~ 93 (264)
.+. ++.+||-..|..
T Consensus 98 ~~~~g~id~li~nAg~~ 114 (280)
T 3nrc_A 98 GKVWDGLDAIVHSIAFA 114 (280)
T ss_dssp HHHCSSCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCccC
Confidence 764 688999888853
No 375
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=41.81 E-value=33 Score=30.59 Aligned_cols=87 Identities=14% Similarity=0.174 Sum_probs=41.3
Q ss_pred ChHHHHHHHHhCCC-eEEEEEcCCCccc--cccccccCceeEeec-CCchhhHHhhhhcCCCCEEEEECCC-hHHHHHHH
Q 024671 1 MGKAVIKAADAAGL-ELVPVSFGTEEES--GQKVEVCGKEIQVHG-LSDRESVLASVFDKYPNMIVVDYTV-PAAVNGNA 75 (264)
Q Consensus 1 MG~~i~~~~~~~~~-eLv~~~~~~~~~~--g~~~~~~~~~i~i~~-~~dl~~~l~~~~~~~~d~VvIDFS~-p~~~~~~~ 75 (264)
+|..+++.+...|. .+++ ++..+... -+..+.. .-+.... .+++.+.+.++....+| ++||.+- ++.+...+
T Consensus 203 vG~~a~qla~~~Ga~~Vi~-~~~~~~~~~~~~~lGa~-~vi~~~~~~~~~~~~~~~~~~~g~D-~vid~~g~~~~~~~~~ 279 (374)
T 2jhf_A 203 VGLSVIMGCKAAGAARIIG-VDINKDKFAKAKEVGAT-ECVNPQDYKKPIQEVLTEMSNGGVD-FSFEVIGRLDTMVTAL 279 (374)
T ss_dssp HHHHHHHHHHHTTCSEEEE-ECSCGGGHHHHHHTTCS-EEECGGGCSSCHHHHHHHHTTSCBS-EEEECSCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCeEEE-EcCCHHHHHHHHHhCCc-eEecccccchhHHHHHHHHhCCCCc-EEEECCCCHHHHHHHH
Confidence 47788888877787 5554 44322110 0111110 0011110 02333333333323567 7888875 45666666
Q ss_pred HHHHhc-CCCeEEecC
Q 024671 76 ELYSKV-GVPFVMGTT 90 (264)
Q Consensus 76 ~~~~~~-g~plViGTT 90 (264)
+.+... |.=+.+|.+
T Consensus 280 ~~l~~~~G~iv~~G~~ 295 (374)
T 2jhf_A 280 SCCQEAYGVSVIVGVP 295 (374)
T ss_dssp HHBCTTTCEEEECSCC
T ss_pred HHhhcCCcEEEEeccC
Confidence 655555 555555543
No 376
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=41.58 E-value=56 Score=27.32 Aligned_cols=72 Identities=15% Similarity=0.139 Sum_probs=45.9
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++...+.|..++.. ++.. +.+++..+.+.....+ .+..|.|.++.+.+.++.+
T Consensus 24 IG~~ia~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 83 (256)
T 3gaf_A 24 IGRAIAGTFAKAGASVVVT-DLKS-------------------EGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAA 83 (256)
T ss_dssp HHHHHHHHHHHHTCEEEEE-ESSH-------------------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCH-------------------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 4888888888778887643 3221 1112222222222223 3457999999999999887
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+|+-..|.
T Consensus 84 ~~~~g~id~lv~nAg~ 99 (256)
T 3gaf_A 84 LDQFGKITVLVNNAGG 99 (256)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 775 78899888775
No 377
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=41.56 E-value=57 Score=26.44 Aligned_cols=34 Identities=15% Similarity=0.111 Sum_probs=19.4
Q ss_pred cCCCCEEEEE-CCChHHHHHHHHHHHhcCCCeEEe
Q 024671 55 DKYPNMIVVD-YTVPAAVNGNAELYSKVGVPFVMG 88 (264)
Q Consensus 55 ~~~~d~VvID-FS~p~~~~~~~~~~~~~g~plViG 88 (264)
+..+|.|+|. +...+.+.+.++.|.++|+++++.
T Consensus 75 ~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v~ 109 (211)
T 3f4w_A 75 DAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVD 109 (211)
T ss_dssp HTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEE
T ss_pred hcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEEE
Confidence 3456633333 333355566777777777776654
No 378
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=41.47 E-value=73 Score=27.14 Aligned_cols=72 Identities=15% Similarity=0.140 Sum_probs=45.1
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++...+.|..++.. ++.. +.+++..+++.....+ .+..|.|.++.+...++.+
T Consensus 40 IG~aia~~la~~G~~V~~~-~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 99 (283)
T 3v8b_A 40 IGRATALALAADGVTVGAL-GRTR-------------------TEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDL 99 (283)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSH-------------------HHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCH-------------------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 3788888877778877643 3221 1122222222222222 3467999999999999887
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.++|-..|.
T Consensus 100 ~~~~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 100 VLKFGHLDIVVANAGI 115 (283)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 764 78888877775
No 379
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=41.39 E-value=38 Score=27.92 Aligned_cols=82 Identities=11% Similarity=0.016 Sum_probs=45.3
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
||+.+++.+.+.|+++....++.+........ ..++.... ++.+ .+ ..+| +||=-+-|..+.+.++....
T Consensus 34 mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~--~~g~~~~~-~~~~-~~-----~~aD-vVilavp~~~~~~v~~~l~~ 103 (220)
T 4huj_A 34 IGSALAERFTAAQIPAIIANSRGPASLSSVTD--RFGASVKA-VELK-DA-----LQAD-VVILAVPYDSIADIVTQVSD 103 (220)
T ss_dssp HHHHHHHHHHHTTCCEEEECTTCGGGGHHHHH--HHTTTEEE-CCHH-HH-----TTSS-EEEEESCGGGHHHHHTTCSC
T ss_pred HHHHHHHHHHhCCCEEEEEECCCHHHHHHHHH--HhCCCccc-ChHH-HH-----hcCC-EEEEeCChHHHHHHHHHhhc
Confidence 78999988887889888655544322111000 00111111 2222 22 2578 66766778777777765422
Q ss_pred -cCCCeEEecCCC
Q 024671 81 -VGVPFVMGTTGG 92 (264)
Q Consensus 81 -~g~plViGTTG~ 92 (264)
.+..+|.-|.|+
T Consensus 104 ~~~~ivi~~~~g~ 116 (220)
T 4huj_A 104 WGGQIVVDASNAI 116 (220)
T ss_dssp CTTCEEEECCCCB
T ss_pred cCCCEEEEcCCCC
Confidence 355667777777
No 380
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=41.31 E-value=87 Score=28.70 Aligned_cols=51 Identities=18% Similarity=0.160 Sum_probs=39.9
Q ss_pred eecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEecC
Q 024671 40 VHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTT 90 (264)
Q Consensus 40 i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGTT 90 (264)
|...+++.+.|+...+...-+-.+.+.+-+.+...++.|.+.+.|+++.++
T Consensus 11 v~~~~~~~~ll~~A~~~~yAVpAfNv~n~e~~~Avl~AAee~~sPvIlq~s 61 (358)
T 1dos_A 11 VITGDDVQKVFQVAKENNFALPAVNCVGTDSINAVLETAAKVKAPVIVQFS 61 (358)
T ss_dssp ECCTHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred eecchHHHHHHHHHHHCCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEECC
Confidence 334456666676655555565689999999999999999999999999775
No 381
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=41.21 E-value=61 Score=27.46 Aligned_cols=72 Identities=18% Similarity=0.149 Sum_probs=45.9
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhc--CCCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFD--KYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~--~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++.. ++... .+++..+.+.. .....+..|.|.++.+...++.+
T Consensus 40 IG~aia~~la~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 99 (270)
T 3ftp_A 40 IGRAIALELARRGAMVIGT-ATTEA-------------------GAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVEST 99 (270)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSHH-------------------HHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHH
Confidence 4888888888888887743 32210 11111111111 12234578999999999999887
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 100 ~~~~g~iD~lvnnAg~ 115 (270)
T 3ftp_A 100 LKEFGALNVLVNNAGI 115 (270)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 664 68899988875
No 382
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=41.12 E-value=75 Score=25.91 Aligned_cols=72 Identities=17% Similarity=0.180 Sum_probs=44.3
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|.+++.. ++... .++...+++.....+ .+..|++.++.+.+.++.+
T Consensus 23 iG~~la~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 82 (255)
T 1fmc_A 23 IGKEIAITFATAGASVVVS-DINAD-------------------AANHVVDEIQQLGGQAFACRCDITSEQELSALADFA 82 (255)
T ss_dssp HHHHHHHHHHTTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-cCCHH-------------------HHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH
Confidence 4888998888888887743 32211 111111221111222 3457999999998888776
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 83 ~~~~~~~d~vi~~Ag~ 98 (255)
T 1fmc_A 83 ISKLGKVDILVNNAGG 98 (255)
T ss_dssp HHHHSSCCEEEECCCC
T ss_pred HHhcCCCCEEEECCCC
Confidence 553 78889888775
No 383
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=40.97 E-value=73 Score=26.42 Aligned_cols=72 Identities=15% Similarity=0.097 Sum_probs=45.1
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
+|+.+++...+.|..++.. ++.... +++..+++ ......+..|+|.++.+...++.+.+
T Consensus 19 IG~aia~~l~~~G~~V~~~-~r~~~~-------------------~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~ 77 (257)
T 3tpc_A 19 LGAAVTRMLAQEGATVLGL-DLKPPA-------------------GEEPAAEL-GAAVRFRNADVTNEADATAALAFAKQ 77 (257)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSCC--------------------------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCChHH-------------------HHHHHHHh-CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4889999888889987753 332211 01111111 01233356799999999999988876
Q ss_pred c--CCCeEEecCCCC
Q 024671 81 V--GVPFVMGTTGGD 93 (264)
Q Consensus 81 ~--g~plViGTTG~~ 93 (264)
. ++.++|-..|..
T Consensus 78 ~~g~id~lv~nAg~~ 92 (257)
T 3tpc_A 78 EFGHVHGLVNCAGTA 92 (257)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 5 788999888753
No 384
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=40.81 E-value=85 Score=25.69 Aligned_cols=72 Identities=11% Similarity=0.157 Sum_probs=45.0
Q ss_pred ChHHHHHHHHh-CCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhc--CCCCEEEEECCChHHHHHHHHH
Q 024671 1 MGKAVIKAADA-AGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFD--KYPNMIVVDYTVPAAVNGNAEL 77 (264)
Q Consensus 1 MG~~i~~~~~~-~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~--~~~d~VvIDFS~p~~~~~~~~~ 77 (264)
+|+.+++.+.+ .|.+++.. ++... .+++...++.. .....+..|++.++.+...++.
T Consensus 16 IG~~~a~~L~~~~g~~V~~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~ 75 (276)
T 1wma_A 16 IGLAIVRDLCRLFSGDVVLT-ARDVT-------------------RGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDF 75 (276)
T ss_dssp HHHHHHHHHHHHSSSEEEEE-ESSHH-------------------HHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEE-eCChH-------------------HHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHH
Confidence 48899988887 89988754 32210 11111222211 1233457899999999888887
Q ss_pred HHhc--CCCeEEecCCC
Q 024671 78 YSKV--GVPFVMGTTGG 92 (264)
Q Consensus 78 ~~~~--g~plViGTTG~ 92 (264)
+.+. ++.+||-..|.
T Consensus 76 ~~~~~g~id~li~~Ag~ 92 (276)
T 1wma_A 76 LRKEYGGLDVLVNNAGI 92 (276)
T ss_dssp HHHHHSSEEEEEECCCC
T ss_pred HHHhcCCCCEEEECCcc
Confidence 6654 67888877764
No 385
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=40.79 E-value=1.2e+02 Score=25.60 Aligned_cols=79 Identities=18% Similarity=0.155 Sum_probs=48.0
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+++++...+.|..++.. ++..... +.+ .+.+++..+++...... .+..|.|.++.+...++.+
T Consensus 21 IG~aia~~l~~~G~~V~~~-~r~~~~~-~~~-----------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 87 (285)
T 3sc4_A 21 IGLAIAKRVAADGANVALV-AKSAEPH-PKL-----------PGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT 87 (285)
T ss_dssp HHHHHHHHHHTTTCEEEEE-ESCCSCC-SSS-----------CCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECChhhh-hhh-----------hHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 4889999888889988753 3322110 000 01222222222221222 2456999999999999888
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.++|-..|.
T Consensus 88 ~~~~g~id~lvnnAg~ 103 (285)
T 3sc4_A 88 VEQFGGIDICVNNASA 103 (285)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 775 78899988875
No 386
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=40.60 E-value=70 Score=27.01 Aligned_cols=72 Identities=13% Similarity=0.146 Sum_probs=44.9
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCC--CCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKY--PNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~--~d~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++.. ++... .+++..+++.... ...+..|++.++.+...++.+
T Consensus 34 IG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 93 (277)
T 2rhc_B 34 IGLEIARRLGKEGLRVFVC-ARGEE-------------------GLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAV 93 (277)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence 4888888888888887743 32211 1111122221112 223467999999999988877
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 94 ~~~~g~iD~lv~~Ag~ 109 (277)
T 2rhc_B 94 VERYGPVDVLVNNAGR 109 (277)
T ss_dssp HHHTCSCSEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 653 58889887774
No 387
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=40.57 E-value=1.5e+02 Score=24.40 Aligned_cols=71 Identities=11% Similarity=0.080 Sum_probs=46.3
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
+|+.+++.+.+.|..++.. ++.. +.+++..+++. .....+..|+|.++.+.+.++.+.+
T Consensus 20 IG~~ia~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~ 78 (259)
T 4e6p_A 20 IGRAFAEAYVREGATVAIA-DIDI-------------------ERARQAAAEIG-PAAYAVQMDVTRQDSIDAAIAATVE 78 (259)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHHHHC-TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCH-------------------HHHHHHHHHhC-CCceEEEeeCCCHHHHHHHHHHHHH
Confidence 4888998888888887743 3221 11222222221 1122356799999999999988776
Q ss_pred c--CCCeEEecCCC
Q 024671 81 V--GVPFVMGTTGG 92 (264)
Q Consensus 81 ~--g~plViGTTG~ 92 (264)
. ++.+||-..|.
T Consensus 79 ~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 79 HAGGLDILVNNAAL 92 (259)
T ss_dssp HSSSCCEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 5 68899988886
No 388
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=40.36 E-value=42 Score=28.59 Aligned_cols=52 Identities=15% Similarity=0.111 Sum_probs=35.8
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCC-eEEecCCCCHHH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVP-FVMGTTGGDRVR 96 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~p-lViGTTG~~~~~ 96 (264)
.|....+.++....|| +|+=++.+..+...++.+.+.|+. .++|+.||...+
T Consensus 180 ~d~~~~~~~l~~~~~d-~i~~~~~~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~ 232 (346)
T 1usg_A 180 KDFSALIARLKKENID-FVYYGGYYPEMGQMLRQARSVGLKTQFMGPEGVGNAS 232 (346)
T ss_dssp CCCHHHHHHHHHTTCC-EEEEESCHHHHHHHHHHHHHTTCCCEEEECGGGCCTT
T ss_pred cCHHHHHHHHHhcCCC-EEEEcCcchHHHHHHHHHHHcCCCCeEEecCCCCcHH
Confidence 3555556666666799 566666666677889999888753 378888886443
No 389
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=40.32 E-value=97 Score=25.85 Aligned_cols=73 Identities=15% Similarity=0.096 Sum_probs=44.9
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhh---hc--CCCCEEEEECCChHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASV---FD--KYPNMIVVDYTVPAAVNGNA 75 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~---~~--~~~d~VvIDFS~p~~~~~~~ 75 (264)
+|+.+++.+.+.|.+++.. ++... .+++..+++ .. .....+..|++.++.+...+
T Consensus 18 IG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 77 (278)
T 1spx_A 18 IGRATAVLFAREGAKVTIT-GRHAE-------------------RLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEIL 77 (278)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHH
Confidence 4889998888889887753 33211 111111111 10 01223467999999999988
Q ss_pred HHHHhc--CCCeEEecCCCC
Q 024671 76 ELYSKV--GVPFVMGTTGGD 93 (264)
Q Consensus 76 ~~~~~~--g~plViGTTG~~ 93 (264)
+.+.+. ++.+||-..|..
T Consensus 78 ~~~~~~~g~id~lv~~Ag~~ 97 (278)
T 1spx_A 78 STTLGKFGKLDILVNNAGAA 97 (278)
T ss_dssp HHHHHHHSCCCEEEECCC--
T ss_pred HHHHHHcCCCCEEEECCCCC
Confidence 877664 788999888863
No 390
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=40.14 E-value=1.5e+02 Score=24.27 Aligned_cols=74 Identities=15% Similarity=0.192 Sum_probs=45.7
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
+|+.+++.+.+.|..++....+..... +.+.+.+... ......+..|+|.++.+.+.++.+.+
T Consensus 19 IG~~~a~~l~~~G~~v~~~~~~~~~~~----------------~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~ 81 (264)
T 3i4f_A 19 LGKQVTEKLLAKGYSVTVTYHSDTTAM----------------ETMKETYKDV-EERLQFVQADVTKKEDLHKIVEEAMS 81 (264)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHHHH----------------HHHHHHTGGG-GGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHCCCEEEEEcCCChHHH----------------HHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 488999888888988875422211000 0011111110 01123356899999999999988876
Q ss_pred c--CCCeEEecCC
Q 024671 81 V--GVPFVMGTTG 91 (264)
Q Consensus 81 ~--g~plViGTTG 91 (264)
. ++.+||-..|
T Consensus 82 ~~g~id~lv~~Ag 94 (264)
T 3i4f_A 82 HFGKIDFLINNAG 94 (264)
T ss_dssp HHSCCCEEECCCC
T ss_pred HhCCCCEEEECCc
Confidence 5 7889998888
No 391
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=40.13 E-value=73 Score=26.35 Aligned_cols=72 Identities=13% Similarity=0.157 Sum_probs=45.3
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++.. ++.. +.+++..+++.....+ .+..|+|.++.+...++.+
T Consensus 19 IG~aia~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~ 78 (247)
T 2jah_A 19 IGEATARALAAEGAAVAIA-ARRV-------------------EKLRALGDELTAAGAKVHVLELDVADRQGVDAAVAST 78 (247)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECCH-------------------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 4888998888888887743 3221 1112222222111222 3456999999999988877
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 79 ~~~~g~id~lv~nAg~ 94 (247)
T 2jah_A 79 VEALGGLDILVNNAGI 94 (247)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 663 68889887775
No 392
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=40.08 E-value=1.6e+02 Score=24.37 Aligned_cols=72 Identities=11% Similarity=0.047 Sum_probs=46.1
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCC--CEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYP--NMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~--d~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++.. ++.. +.+++..+++..... ..+..|+|.++.+...++.+
T Consensus 19 IG~aia~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (252)
T 3h7a_A 19 IGAEIAKKFAAEGFTVFAG-RRNG-------------------EKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAA 78 (252)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSG-------------------GGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCH-------------------HHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHH
Confidence 4889998888889887753 3322 112222222221122 23567999999999999888
Q ss_pred Hhc-CCCeEEecCCC
Q 024671 79 SKV-GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~-g~plViGTTG~ 92 (264)
.+. ++.++|-..|.
T Consensus 79 ~~~g~id~lv~nAg~ 93 (252)
T 3h7a_A 79 DAHAPLEVTIFNVGA 93 (252)
T ss_dssp HHHSCEEEEEECCCC
T ss_pred HhhCCceEEEECCCc
Confidence 775 56788877774
No 393
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=39.86 E-value=42 Score=24.48 Aligned_cols=37 Identities=11% Similarity=0.158 Sum_probs=24.0
Q ss_pred CCchhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHH
Q 024671 43 LSDRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYS 79 (264)
Q Consensus 43 ~~dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~ 79 (264)
..+.++++..+....||.|++|...|. .-.+.++...
T Consensus 40 ~~~~~~al~~l~~~~~dlvllD~~lp~~~g~~~~~~l~ 77 (140)
T 3c97_A 40 VTNGLQALQAYQNRQFDVIIMDIQMPVMDGLEAVSEIR 77 (140)
T ss_dssp ESSHHHHHHHHHHSCCSEEEECTTCCSSCHHHHHHHHH
T ss_pred ECCHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHH
Confidence 356666776666667998899999885 2234444443
No 394
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=39.86 E-value=82 Score=26.42 Aligned_cols=75 Identities=19% Similarity=0.158 Sum_probs=46.3
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
+|+++++...+.|..|+.. ++.... .+.+++.+.+.....+..+..|.|.++.+.+.++.+.+
T Consensus 20 IG~aiA~~la~~Ga~Vvi~-~r~~~~----------------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 20 IAFGVAKVLDQLGAKLVFT-YRKERS----------------RKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSGGG----------------HHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECCHHH----------------HHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4789998888899988743 322110 01112222222112233456799999999999998877
Q ss_pred c--CCCeEEecCCC
Q 024671 81 V--GVPFVMGTTGG 92 (264)
Q Consensus 81 ~--g~plViGTTG~ 92 (264)
. ++.+++-..|+
T Consensus 83 ~~G~iD~lvnnAg~ 96 (256)
T 4fs3_A 83 DVGNIDGVYHSIAF 96 (256)
T ss_dssp HHCCCSEEEECCCC
T ss_pred HhCCCCEEEecccc
Confidence 4 67788766664
No 395
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=39.70 E-value=54 Score=28.21 Aligned_cols=72 Identities=15% Similarity=0.075 Sum_probs=47.8
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+++++...+.|..++.. +... +.++++.+++.....+ .+..|.|.++.+...++.+
T Consensus 21 IG~aia~~la~~Ga~Vvi~-~~~~-------------------~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~ 80 (255)
T 4g81_D 21 LGFAYAEGLAAAGARVILN-DIRA-------------------TLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKL 80 (255)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CSCH-------------------HHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECCH-------------------HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Confidence 4889998888889887742 2221 1223333333333333 2346999999999999999
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.++|--.|.
T Consensus 81 ~~~~G~iDiLVNNAG~ 96 (255)
T 4g81_D 81 DAEGIHVDILINNAGI 96 (255)
T ss_dssp HHTTCCCCEEEECCCC
T ss_pred HHHCCCCcEEEECCCC
Confidence 885 57788877775
No 396
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=39.57 E-value=23 Score=32.22 Aligned_cols=24 Identities=25% Similarity=0.426 Sum_probs=14.1
Q ss_pred HHHHHHHHhcCCCeEEecCCCCHH
Q 024671 72 NGNAELYSKVGVPFVMGTTGGDRV 95 (264)
Q Consensus 72 ~~~~~~~~~~g~plViGTTG~~~~ 95 (264)
.+.++.+...++|+|+||.+.+.+
T Consensus 82 ~~vi~~~~~grvpViaGvg~~st~ 105 (344)
T 2hmc_A 82 MEGVERLVKAGIPVIVGTGAVNTA 105 (344)
T ss_dssp HHHHHHHHHTTCCEEEECCCSSHH
T ss_pred HHHHHHHhCCCCcEEEecCCCCHH
Confidence 344444445567777777766643
No 397
>3ozi_A L6TR; plant TIR domain, plant protein; 2.30A {Linum usitatissimum}
Probab=39.57 E-value=95 Score=26.15 Aligned_cols=73 Identities=11% Similarity=0.091 Sum_probs=48.3
Q ss_pred CCCCEEEEECCChHH----HHHHHHHHHhcCCCeEEecCCCCH-----HHHHHHHHccC-CcEEEccchhHHHHHHHHHH
Q 024671 56 KYPNMIVVDYTVPAA----VNGNAELYSKVGVPFVMGTTGGDR-----VRLHETIENSN-VYAVISPQMGKQVVAFLAAM 125 (264)
Q Consensus 56 ~~~d~VvIDFS~p~~----~~~~~~~~~~~g~plViGTTG~~~-----~~~~~l~~~~~-~~~v~s~NfSlGv~ll~~~~ 125 (264)
...| |.|-|+..+. +..+.+...+.|+.+-+-.-.+.. .++.+..+.++ ..+|+|+||.-.-.-+.+|.
T Consensus 34 ~~yD-VFISfrg~D~r~~Fv~~L~~aL~~~GI~~f~D~~el~~G~~I~~~l~~aIe~Sri~IvV~S~nYa~S~WCl~EL~ 112 (204)
T 3ozi_A 34 VEYE-VFLSFRGPDTREQFTDFLYQSLRRYKIHTFRDDDELLKGKEIGPNLLRAIDQSKIYVPIISSGYADSKWCLMELA 112 (204)
T ss_dssp CCCC-EEEEECHHHHTTTHHHHHHHHHHHTTCCEEEEETTTCCGGGTTTTHHHHHHHCSEEEEEECTTGGGCHHHHHHHH
T ss_pred cCCe-EEEeccccCCCHHHHHHHHHHHHHCCCcEEEeCCccCCCCchHHHHHHHHHhCcEeeEEEEcccccCcHHHHHHH
Confidence 3578 8999998874 344444555678888777555432 13334445567 45699999988877777776
Q ss_pred HHHH
Q 024671 126 EIMA 129 (264)
Q Consensus 126 ~~aa 129 (264)
+.+-
T Consensus 113 ~I~e 116 (204)
T 3ozi_A 113 EIVR 116 (204)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6553
No 398
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=39.40 E-value=1e+02 Score=25.94 Aligned_cols=88 Identities=13% Similarity=0.062 Sum_probs=49.9
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++.. +...+...... ...+.-...+.+++..+.+...... .+..|.|.++.+.+.++.+
T Consensus 23 IG~aia~~la~~G~~V~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 98 (286)
T 3uve_A 23 QGRSHAVRLAQEGADIIAV-DICKPIRAGVV---DTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSG 98 (286)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ECCSCSBTTBC---CCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEEE-ecccccccccc---ccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 4889999888889988753 32211000000 0000000112233332322222233 3457999999999999988
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.++|-..|.
T Consensus 99 ~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 99 VEQLGRLDIIVANAGI 114 (286)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCCCEEEECCcc
Confidence 775 78899988885
No 399
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=39.17 E-value=27 Score=29.35 Aligned_cols=72 Identities=17% Similarity=0.243 Sum_probs=41.4
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChH-----------
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPA----------- 69 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~----------- 69 (264)
+|+.+++.+.+.|+++++. ++... ++...++++++++. ..+| +||.+..+.
T Consensus 17 iG~~l~~~L~~~g~~V~~~-~r~~~-------------D~~d~~~~~~~~~~---~~~d-~vi~~a~~~~~~~~~~~~~~ 78 (287)
T 3sc6_A 17 LGKQLQEELNPEEYDIYPF-DKKLL-------------DITNISQVQQVVQE---IRPH-IIIHCAAYTKVDQAEKERDL 78 (287)
T ss_dssp HHHHHHHHSCTTTEEEEEE-CTTTS-------------CTTCHHHHHHHHHH---HCCS-EEEECCCCCCHHHHTTCHHH
T ss_pred HHHHHHHHHHhCCCEEEEe-ccccc-------------CCCCHHHHHHHHHh---cCCC-EEEECCcccChHHHhcCHHH
Confidence 3788888877778888764 33211 11111233333332 2588 789875321
Q ss_pred -------HHHHHHHHHHhcCCCeEEecC
Q 024671 70 -------AVNGNAELYSKVGVPFVMGTT 90 (264)
Q Consensus 70 -------~~~~~~~~~~~~g~plViGTT 90 (264)
.+...++.|.+.++.+|.-+|
T Consensus 79 ~~~~n~~~~~~l~~~~~~~~~~~v~~SS 106 (287)
T 3sc6_A 79 AYVINAIGARNVAVASQLVGAKLVYIST 106 (287)
T ss_dssp HHHHHTHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCeEEEEch
Confidence 245678888888887664333
No 400
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=38.97 E-value=1.2e+02 Score=25.79 Aligned_cols=73 Identities=14% Similarity=0.130 Sum_probs=43.6
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++.. +..... ..+...+.+.....+ .+..|.|.++.+.+.++.+
T Consensus 59 IG~aia~~la~~G~~V~~~-~r~~~~------------------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 119 (291)
T 3ijr_A 59 IGRAVSIAFAKEGANIAIA-YLDEEG------------------DANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQET 119 (291)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSCHH------------------HHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCchH------------------HHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 4888888888888887743 222100 011111111111223 2345999999999999887
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.++|-..|.
T Consensus 120 ~~~~g~iD~lvnnAg~ 135 (291)
T 3ijr_A 120 VRQLGSLNILVNNVAQ 135 (291)
T ss_dssp HHHHSSCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 764 68888866553
No 401
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=38.86 E-value=82 Score=25.89 Aligned_cols=72 Identities=18% Similarity=0.157 Sum_probs=45.0
Q ss_pred ChHHHHHHHHhCCCeEEEEEcC-CCccccccccccCceeEeecCCchhhHHhhhhcCCC--CEEEEECCChHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFG-TEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYP--NMIVVDYTVPAAVNGNAEL 77 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~-~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~--d~VvIDFS~p~~~~~~~~~ 77 (264)
+|+.+++.+.+.|.+++.. ++ ... .+++..+.+..... ..+..|++.++.+.+.++.
T Consensus 19 iG~~~a~~l~~~G~~V~~~-~r~~~~-------------------~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 78 (261)
T 1gee_A 19 LGKSMAIRFATEKAKVVVN-YRSKED-------------------EANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQS 78 (261)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSCHH-------------------HHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-cCCChH-------------------HHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence 4888998888888887753 33 210 11111122111112 2345799999999988887
Q ss_pred HHhc--CCCeEEecCCC
Q 024671 78 YSKV--GVPFVMGTTGG 92 (264)
Q Consensus 78 ~~~~--g~plViGTTG~ 92 (264)
+.+. ++.+||-..|.
T Consensus 79 ~~~~~g~id~li~~Ag~ 95 (261)
T 1gee_A 79 AIKEFGKLDVMINNAGL 95 (261)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 7654 78899988775
No 402
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=38.86 E-value=71 Score=27.09 Aligned_cols=71 Identities=18% Similarity=0.128 Sum_probs=46.2
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
+|+.+++...+.|..++.. ++.. +.+++..+++. .....+..|.|.++.+.+.++.+.+
T Consensus 40 IG~aia~~la~~G~~V~~~-~r~~-------------------~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~ 98 (272)
T 4dyv_A 40 VGRAVAVALAGAGYGVALA-GRRL-------------------DALQETAAEIG-DDALCVPTDVTDPDSVRALFTATVE 98 (272)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHHHHT-SCCEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECCH-------------------HHHHHHHHHhC-CCeEEEEecCCCHHHHHHHHHHHHH
Confidence 4788888888888887643 3221 11222222221 1233456799999999999988776
Q ss_pred c--CCCeEEecCCC
Q 024671 81 V--GVPFVMGTTGG 92 (264)
Q Consensus 81 ~--g~plViGTTG~ 92 (264)
. ++.+||-..|.
T Consensus 99 ~~g~iD~lVnnAg~ 112 (272)
T 4dyv_A 99 KFGRVDVLFNNAGT 112 (272)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 5 78899988775
No 403
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=38.84 E-value=1.6e+02 Score=24.14 Aligned_cols=39 Identities=13% Similarity=0.165 Sum_probs=24.5
Q ss_pred HhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEe
Q 024671 50 LASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMG 88 (264)
Q Consensus 50 l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViG 88 (264)
+..+....+|.+++--+.++...+.++.+.+.++|+|.-
T Consensus 51 ~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~ 89 (290)
T 2fn9_A 51 FDAIIAAGYDAIIFNPTDADGSIANVKRAKEAGIPVFCV 89 (290)
T ss_dssp HHHHHHTTCSEEEECCSCTTTTHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHcCCCEEEEecCChHHHHHHHHHHHHCCCeEEEE
Confidence 344444578854554444454556777888899998764
No 404
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=38.83 E-value=1.1e+02 Score=25.86 Aligned_cols=54 Identities=13% Similarity=0.068 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhcCCCeEEec--------CCCCHHHHHHH---HHccCCcEEEccchhHHHHHHHHH
Q 024671 70 AVNGNAELYSKVGVPFVMGT--------TGGDRVRLHET---IENSNVYAVISPQMGKQVVAFLAA 124 (264)
Q Consensus 70 ~~~~~~~~~~~~g~plViGT--------TG~~~~~~~~l---~~~~~~~~v~s~NfSlGv~ll~~~ 124 (264)
.+.+.++.|.+.|+|+++.+ .|++.+.+.++ ++..+.-.+..+ ++.|...+.++
T Consensus 133 ~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~-~~~~~~~l~~i 197 (273)
T 2qjg_A 133 DLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKTS-YTGDIDSFRDV 197 (273)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEEC-CCSSHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEEC-CCCCHHHHHHH
Confidence 35667788888899999876 45666544333 334454333222 34565554443
No 405
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=38.82 E-value=83 Score=26.07 Aligned_cols=74 Identities=12% Similarity=0.200 Sum_probs=45.4
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++.. ++.... ..+++...++...... .+..|+|.++.+...++.+
T Consensus 14 IG~~ia~~l~~~G~~V~~~-~r~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 75 (258)
T 3a28_C 14 IGRGISEKLAADGFDIAVA-DLPQQE-----------------EQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEA 75 (258)
T ss_dssp HHHHHHHHHHHHTCEEEEE-ECGGGH-----------------HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCcch-----------------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4889998888778887743 322100 0022222222211222 3456999999999988877
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 76 ~~~~g~iD~lv~nAg~ 91 (258)
T 3a28_C 76 AEKLGGFDVLVNNAGI 91 (258)
T ss_dssp HHHHTCCCEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 664 68899888775
No 406
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=38.70 E-value=1.5e+02 Score=23.81 Aligned_cols=115 Identities=15% Similarity=0.009 Sum_probs=56.8
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHH-HHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNG-NAELYS 79 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~-~~~~~~ 79 (264)
||+.+++.+.+.|++++. ++..+.....-....+..+-.-...+ ++.+.+..-..+| ++|=.+..+.... ....+.
T Consensus 11 ~G~~la~~L~~~g~~v~v-id~~~~~~~~l~~~~~~~~i~gd~~~-~~~l~~a~i~~ad-~vi~~~~~d~~n~~~~~~a~ 87 (218)
T 3l4b_C 11 TAYYLARSMLSRKYGVVI-INKDRELCEEFAKKLKATIIHGDGSH-KEILRDAEVSKND-VVVILTPRDEVNLFIAQLVM 87 (218)
T ss_dssp HHHHHHHHHHHTTCCEEE-EESCHHHHHHHHHHSSSEEEESCTTS-HHHHHHHTCCTTC-EEEECCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEE-EECCHHHHHHHHHHcCCeEEEcCCCC-HHHHHhcCcccCC-EEEEecCCcHHHHHHHHHHH
Confidence 588999888888998885 45433211000000011111111122 2234433234678 5665554444433 333444
Q ss_pred h-cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHHHHH
Q 024671 80 K-VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVA 120 (264)
Q Consensus 80 ~-~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlGv~l 120 (264)
+ ++.+-|+.-+-- ++..+.+ +..+.-.+++|....+-.+
T Consensus 88 ~~~~~~~iia~~~~-~~~~~~l-~~~G~d~vi~p~~~~~~~l 127 (218)
T 3l4b_C 88 KDFGVKRVVSLVND-PGNMEIF-KKMGITTVLNLTTLITNTV 127 (218)
T ss_dssp HTSCCCEEEECCCS-GGGHHHH-HHHTCEECCCHHHHHHHHH
T ss_pred HHcCCCeEEEEEeC-cchHHHH-HHCCCCEEECHHHHHHHHH
Confidence 4 577766655432 3333334 3446667888887766533
No 407
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=38.66 E-value=38 Score=29.37 Aligned_cols=105 Identities=12% Similarity=0.154 Sum_probs=51.6
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHH-HHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVN-GNAELYS 79 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~-~~~~~~~ 79 (264)
||+.+++.+...|+++.. .++..... ..+ ...++......++++.+ ..+| +||..+-+..+. +.++. .
T Consensus 166 iG~~~a~~l~~~G~~V~~-~dr~~~~~-~~~--~~~g~~~~~~~~l~~~l-----~~aD-vVi~~~p~~~i~~~~l~~-m 234 (293)
T 3d4o_A 166 VGMSVARKFAALGAKVKV-GARESDLL-ARI--AEMGMEPFHISKAAQEL-----RDVD-VCINTIPALVVTANVLAE-M 234 (293)
T ss_dssp HHHHHHHHHHHTTCEEEE-EESSHHHH-HHH--HHTTSEEEEGGGHHHHT-----TTCS-EEEECCSSCCBCHHHHHH-S
T ss_pred HHHHHHHHHHhCCCEEEE-EECCHHHH-HHH--HHCCCeecChhhHHHHh-----cCCC-EEEECCChHHhCHHHHHh-c
Confidence 688999888888898764 45432110 000 01122222123444443 2578 788877443222 22222 2
Q ss_pred hcCCCeEEecC-CCCHHHHHHHHHccCCcEEEccchhHHH
Q 024671 80 KVGVPFVMGTT-GGDRVRLHETIENSNVYAVISPQMGKQV 118 (264)
Q Consensus 80 ~~g~plViGTT-G~~~~~~~~l~~~~~~~~v~s~NfSlGv 118 (264)
+.+ .+++=+. |-..-++ +.++..++.++..||+.-.+
T Consensus 235 k~~-~~lin~ar~~~~~~~-~~a~~~Gv~~~~~~~l~~~v 272 (293)
T 3d4o_A 235 PSH-TFVIDLASKPGGTDF-RYAEKRGIKALLVPGLPGIV 272 (293)
T ss_dssp CTT-CEEEECSSTTCSBCH-HHHHHHTCEEEECCCHHHHH
T ss_pred CCC-CEEEEecCCCCCCCH-HHHHHCCCEEEECCCCCccc
Confidence 333 3444332 3211123 33344466677789987766
No 408
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=38.65 E-value=68 Score=27.82 Aligned_cols=81 Identities=10% Similarity=-0.016 Sum_probs=41.1
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHH--H-
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAE--L- 77 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~--~- 77 (264)
||+.+++.+.+.|+++.. .++.+... +.+ ...++.. ..++++++. .+|+|++=-..|..+.+.+. .
T Consensus 20 mG~~~A~~l~~~G~~V~~-~dr~~~~~-~~~--~~~g~~~--~~~~~e~~~-----~aDvVi~~vp~~~~~~~v~~~~~l 88 (306)
T 3l6d_A 20 MGTIMAQVLLKQGKRVAI-WNRSPGKA-AAL--VAAGAHL--CESVKAALS-----ASPATIFVLLDNHATHEVLGMPGV 88 (306)
T ss_dssp HHHHHHHHHHHTTCCEEE-ECSSHHHH-HHH--HHHTCEE--CSSHHHHHH-----HSSEEEECCSSHHHHHHHHTSTTH
T ss_pred HHHHHHHHHHHCCCEEEE-EeCCHHHH-HHH--HHCCCee--cCCHHHHHh-----cCCEEEEEeCCHHHHHHHhcccch
Confidence 799999888888998874 45433211 001 1112222 245555543 37844444444555665553 1
Q ss_pred -HHhcCCCeEEecCCC
Q 024671 78 -YSKVGVPFVMGTTGG 92 (264)
Q Consensus 78 -~~~~g~plViGTTG~ 92 (264)
....|.-+|..+|+.
T Consensus 89 ~~~~~g~ivid~st~~ 104 (306)
T 3l6d_A 89 ARALAHRTIVDYTTNA 104 (306)
T ss_dssp HHHTTTCEEEECCCCC
T ss_pred hhccCCCEEEECCCCC
Confidence 123444455444443
No 409
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=38.60 E-value=60 Score=27.00 Aligned_cols=72 Identities=18% Similarity=0.222 Sum_probs=45.3
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhh---cCCCCEEEEECCChHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVF---DKYPNMIVVDYTVPAAVNGNAEL 77 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~---~~~~d~VvIDFS~p~~~~~~~~~ 77 (264)
+|+.+++.+.+.|.+++.. ++... .+++..+++. ......+..|++.++.+.+.++.
T Consensus 19 IG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~ 78 (263)
T 3ai3_A 19 IGLAIAEGFAKEGAHIVLV-ARQVD-------------------RLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVES 78 (263)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-cCCHH-------------------HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 4888998888888887753 32211 1111112111 11122345699999999999887
Q ss_pred HHhc--CCCeEEecCCC
Q 024671 78 YSKV--GVPFVMGTTGG 92 (264)
Q Consensus 78 ~~~~--g~plViGTTG~ 92 (264)
+.+. ++.+|+-..|.
T Consensus 79 ~~~~~g~id~lv~~Ag~ 95 (263)
T 3ai3_A 79 VRSSFGGADILVNNAGT 95 (263)
T ss_dssp HHHHHSSCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 7664 78899988875
No 410
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=38.57 E-value=1.3e+02 Score=24.78 Aligned_cols=72 Identities=10% Similarity=0.111 Sum_probs=45.1
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|.+++.. ++... .+++..+++.....+ .+..|.+.++.+.+.++.+
T Consensus 21 iG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (260)
T 2ae2_A 21 IGYGIVEELASLGASVYTC-SRNQK-------------------ELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTV 80 (260)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4888998888888887743 32211 111112222111222 2457999999999998887
Q ss_pred Hhc---CCCeEEecCCC
Q 024671 79 SKV---GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~---g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 81 ~~~~~g~id~lv~~Ag~ 97 (260)
T 2ae2_A 81 ANHFHGKLNILVNNAGI 97 (260)
T ss_dssp HHHTTTCCCEEEECCCC
T ss_pred HHHcCCCCCEEEECCCC
Confidence 663 58889888874
No 411
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=38.32 E-value=1.6e+02 Score=23.91 Aligned_cols=73 Identities=14% Similarity=0.123 Sum_probs=47.1
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++.. ++... .+++....+.....+ .+..|+|.++.+.+.++.+
T Consensus 17 IG~~~a~~l~~~G~~v~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (247)
T 3lyl_A 17 IGFEVAHALASKGATVVGT-ATSQA-------------------SAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEI 76 (247)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSHH-------------------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 4889998888889988753 32211 111112222112222 3567999999999999888
Q ss_pred Hhc--CCCeEEecCCCC
Q 024671 79 SKV--GVPFVMGTTGGD 93 (264)
Q Consensus 79 ~~~--g~plViGTTG~~ 93 (264)
.+. ++.+||=..|..
T Consensus 77 ~~~~~~id~li~~Ag~~ 93 (247)
T 3lyl_A 77 KAENLAIDILVNNAGIT 93 (247)
T ss_dssp HHTTCCCSEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 764 578999888863
No 412
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=38.26 E-value=1.6e+02 Score=24.04 Aligned_cols=41 Identities=22% Similarity=0.280 Sum_probs=25.6
Q ss_pred HhhhhcCCCCEEEEECCCh---HHHHHHHHHHHhcCCCeEEecC
Q 024671 50 LASVFDKYPNMIVVDYTVP---AAVNGNAELYSKVGVPFVMGTT 90 (264)
Q Consensus 50 l~~~~~~~~d~VvIDFS~p---~~~~~~~~~~~~~g~plViGTT 90 (264)
+..+....+|.+++--+.+ ....+.++.+.+.|+|+|.--+
T Consensus 64 ~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~~~~iPvV~~~~ 107 (298)
T 3tb6_A 64 LENLLSQHIDGLIVEPTKSALQTPNIGYYLNLEKNGIPFAMINA 107 (298)
T ss_dssp HHHHHHTCCSEEEECCSSTTSCCTTHHHHHHHHHTTCCEEEESS
T ss_pred HHHHHHCCCCEEEEecccccccCCcHHHHHHHHhcCCCEEEEec
Confidence 4444456789555532222 2455777888889999987543
No 413
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=38.23 E-value=81 Score=27.08 Aligned_cols=73 Identities=16% Similarity=0.115 Sum_probs=40.0
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCCh------------
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVP------------ 68 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p------------ 68 (264)
+|+.+++.+.+.|+++++. ++.....+-.. ...++ .|.+. +..+.+ .+| +||.+..+
T Consensus 31 iG~~l~~~L~~~G~~V~~~-~r~~~~~~~~~----~~~Dl---~d~~~-~~~~~~-~~d-~vih~A~~~~~~~~~~~~~~ 99 (347)
T 4id9_A 31 VGRAVVAALRTQGRTVRGF-DLRPSGTGGEE----VVGSL---EDGQA-LSDAIM-GVS-AVLHLGAFMSWAPADRDRMF 99 (347)
T ss_dssp HHHHHHHHHHHTTCCEEEE-ESSCCSSCCSE----EESCT---TCHHH-HHHHHT-TCS-EEEECCCCCCSSGGGHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEE-eCCCCCCCccE----EecCc---CCHHH-HHHHHh-CCC-EEEECCcccCcchhhHHHHH
Confidence 3889999988889998864 43221100000 00112 12222 222222 678 78876432
Q ss_pred ----HHHHHHHHHHHhcCCC
Q 024671 69 ----AAVNGNAELYSKVGVP 84 (264)
Q Consensus 69 ----~~~~~~~~~~~~~g~p 84 (264)
..+...++.|.+.++.
T Consensus 100 ~~nv~~~~~ll~a~~~~~~~ 119 (347)
T 4id9_A 100 AVNVEGTRRLLDAASAAGVR 119 (347)
T ss_dssp HHHTHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHHHcCCC
Confidence 2456778888888874
No 414
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=38.19 E-value=90 Score=26.19 Aligned_cols=72 Identities=14% Similarity=0.128 Sum_probs=44.5
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++.. ++.. +.+++..+++.....+ .+..|++.++.+.+.++.+
T Consensus 33 IG~aia~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 92 (273)
T 1ae1_A 33 IGYAIVEELAGLGARVYTC-SRNE-------------------KELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTV 92 (273)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCH-------------------HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence 3788888877778877643 3221 1112222222111222 3467999999999988887
Q ss_pred Hh---cCCCeEEecCCC
Q 024671 79 SK---VGVPFVMGTTGG 92 (264)
Q Consensus 79 ~~---~g~plViGTTG~ 92 (264)
.+ -++.+||-..|.
T Consensus 93 ~~~~~g~id~lv~nAg~ 109 (273)
T 1ae1_A 93 AHVFDGKLNILVNNAGV 109 (273)
T ss_dssp HHHTTSCCCEEEECCCC
T ss_pred HHHcCCCCcEEEECCCC
Confidence 66 358888888875
No 415
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=38.18 E-value=83 Score=26.69 Aligned_cols=71 Identities=15% Similarity=0.104 Sum_probs=45.4
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
+|+.+++.+.+.|..++.. ++.. +.+++..+++ ......+..|.|.++.+...++.+.+
T Consensus 39 IG~aia~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (277)
T 4dqx_A 39 IGRATAELFAKNGAYVVVA-DVNE-------------------DAAVRVANEI-GSKAFGVRVDVSSAKDAESMVEKTTA 97 (277)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSH-------------------HHHHHHHHHH-CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCH-------------------HHHHHHHHHh-CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 4888888888888887743 3221 1112222221 11222356799999999999988776
Q ss_pred c--CCCeEEecCCC
Q 024671 81 V--GVPFVMGTTGG 92 (264)
Q Consensus 81 ~--g~plViGTTG~ 92 (264)
. ++.+||-..|.
T Consensus 98 ~~g~iD~lv~nAg~ 111 (277)
T 4dqx_A 98 KWGRVDVLVNNAGF 111 (277)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 5 78899988885
No 416
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=38.07 E-value=91 Score=26.03 Aligned_cols=72 Identities=15% Similarity=0.142 Sum_probs=46.8
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcC---CCCEEEEECCChHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDK---YPNMIVVDYTVPAAVNGNAEL 77 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~---~~d~VvIDFS~p~~~~~~~~~ 77 (264)
+|+.+++.+.+.|..++.. ++.. +.+++..+++... ....+..|.|.++.+...++.
T Consensus 22 IG~aia~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 81 (262)
T 3pk0_A 22 IGRGIATVFARAGANVAVA-GRST-------------------ADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGR 81 (262)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCH-------------------HHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHH
Confidence 4889998888889887753 3221 1122222222221 122346799999999999988
Q ss_pred HHhc--CCCeEEecCCC
Q 024671 78 YSKV--GVPFVMGTTGG 92 (264)
Q Consensus 78 ~~~~--g~plViGTTG~ 92 (264)
+.+. ++.+||-..|.
T Consensus 82 ~~~~~g~id~lvnnAg~ 98 (262)
T 3pk0_A 82 AVEEFGGIDVVCANAGV 98 (262)
T ss_dssp HHHHHSCCSEEEECCCC
T ss_pred HHHHhCCCCEEEECCCC
Confidence 7764 78899988875
No 417
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=38.01 E-value=46 Score=29.17 Aligned_cols=58 Identities=10% Similarity=0.089 Sum_probs=37.1
Q ss_pred CCCEEEEECCCh-----HHHHHHHHHHHhcCCCeEEecCC-----CCHHHHHHHHHccCCcEEEccchhH
Q 024671 57 YPNMIVVDYTVP-----AAVNGNAELYSKVGVPFVMGTTG-----GDRVRLHETIENSNVYAVISPQMGK 116 (264)
Q Consensus 57 ~~d~VvIDFS~p-----~~~~~~~~~~~~~g~plViGTTG-----~~~~~~~~l~~~~~~~~v~s~NfSl 116 (264)
.+|.++|---.. +.+...++.+.+.++|+|+=-=| +..+..+.+.+ ..+.|+.||.+-
T Consensus 58 ~a~alvIn~G~l~~~~~~~~~~a~~~a~~~~~PvVlDPVg~gas~~r~~~~~~Ll~--~~~~VItpN~~E 125 (273)
T 3dzv_A 58 QTSALVLNLGHLSQEREQSLLAASDYARQVNKLTVVDLVGYGASDIRNEVGEKLVH--NQPTVVKGNLSE 125 (273)
T ss_dssp TCSEEEEECCSCCHHHHHHHHHHHHHHHHTTCCEEEECTTTTSCHHHHHHHHHHHH--TCCSEEEEEHHH
T ss_pred HCCeEEEecCCCChHHHHHHHHHHHHHHHcCCcEEEchhhcCCcccCHHHHHHHHh--cCCcEECCCHHH
Confidence 467678876553 34556666788889999985444 33333444442 357799999654
No 418
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=37.98 E-value=98 Score=25.99 Aligned_cols=84 Identities=18% Similarity=0.123 Sum_probs=49.1
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++.. ++..... . ...+....+++++..+.+...... .+..|.|.++.+...++.+
T Consensus 22 IG~a~a~~l~~~G~~V~~~-~r~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 93 (281)
T 3s55_A 22 MGRSHAVALAEAGADIAIC-DRCENSD-V------VGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFVAEA 93 (281)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ECCSCCT-T------CSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEEE-eCCcccc-c------cccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 4899999888889987753 4321100 0 000010111222222222222233 3456999999999999888
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.++|-..|.
T Consensus 94 ~~~~g~id~lv~nAg~ 109 (281)
T 3s55_A 94 EDTLGGIDIAITNAGI 109 (281)
T ss_dssp HHHHTCCCEEEECCCC
T ss_pred HHhcCCCCEEEECCCC
Confidence 765 78899988885
No 419
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=37.96 E-value=57 Score=29.02 Aligned_cols=49 Identities=14% Similarity=0.201 Sum_probs=36.9
Q ss_pred EEEECCChHHHHHHHHHHHhcCCCeEEecCCCC-HHHHHHHHHccCCcEEEccc
Q 024671 61 IVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGD-RVRLHETIENSNVYAVISPQ 113 (264)
Q Consensus 61 VvIDFS~p~~~~~~~~~~~~~g~plViGTTG~~-~~~~~~l~~~~~~~~v~s~N 113 (264)
+.||=+.|+.+...+++ |.++|=-.+|++ .+++-.++...+.|+|..++
T Consensus 118 iSIDT~~~~V~~aAl~a----Ga~iINdvsg~~~d~~m~~~aa~~g~~vVlmh~ 167 (297)
T 1tx2_A 118 ISIDTYKAEVAKQAIEA----GAHIINDIWGAKAEPKIAEVAAHYDVPIILMHN 167 (297)
T ss_dssp EEEECSCHHHHHHHHHH----TCCEEEETTTTSSCTHHHHHHHHHTCCEEEECC
T ss_pred EEEeCCCHHHHHHHHHc----CCCEEEECCCCCCCHHHHHHHHHhCCcEEEEeC
Confidence 78999998877766654 999999899875 45565666667788877665
No 420
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=37.95 E-value=96 Score=26.50 Aligned_cols=84 Identities=12% Similarity=0.069 Sum_probs=49.1
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+++++.+.+.|..++.. +......+.. +.-...+.+++...++.....+ .+..|.|.++.+...++.+
T Consensus 40 IG~aia~~la~~G~~V~~~-~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 111 (299)
T 3t7c_A 40 QGRSHAITLAREGADIIAI-DVCKQLDGVK-------LPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDG 111 (299)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ECCSCCTTCC-------SCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eccccccccc-------ccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence 4889998888889988753 3221100000 0000112233333333222233 3467999999999999888
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 112 ~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 112 VTQLGRLDIVLANAAL 127 (299)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCCCEEEECCCC
Confidence 764 68888877774
No 421
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=37.91 E-value=61 Score=27.77 Aligned_cols=56 Identities=9% Similarity=-0.010 Sum_probs=37.0
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCC-eEEecCCCCHHHHHHH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVP-FVMGTTGGDRVRLHET 100 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~p-lViGTTG~~~~~~~~l 100 (264)
.|....+..+....|| +|+=++.+..+...++.+.+.|+. .++|+.|+...++...
T Consensus 180 ~d~~~~~~~l~~~~~d-~v~~~~~~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 236 (356)
T 3ipc_A 180 KDFSALISKMKEAGVS-IIYWGGLHTEAGLIIRQAADQGLKAKLVSGDGIVSNELASI 236 (356)
T ss_dssp CCCHHHHHHHHHTTCC-EEEEESCHHHHHHHHHHHHHHTCCCEEEECGGGCSHHHHHH
T ss_pred CCHHHHHHHHHhcCCC-EEEEccCchHHHHHHHHHHHCCCCCcEEEeccccCHHHHHH
Confidence 4555666666667899 455455566666889998887754 4678888865554443
No 422
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=37.87 E-value=82 Score=27.95 Aligned_cols=50 Identities=12% Similarity=0.106 Sum_probs=39.1
Q ss_pred EEEEECCChHHHHHHHHHHHhcCCCeEEecCCCCHHHHHHHHHccCCcEEEccc
Q 024671 60 MIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQ 113 (264)
Q Consensus 60 ~VvIDFS~p~~~~~~~~~~~~~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~N 113 (264)
.+-||=+.|+++...++. |.++|=-.+|++.+++-.++...+.|+|+-++
T Consensus 99 piSIDT~~~~Va~aAl~a----Ga~iINdVsg~~d~~m~~~~a~~~~~vVlmh~ 148 (294)
T 2y5s_A 99 PLSIDTYKPAVMRAALAA----GADLINDIWGFRQPGAIDAVRDGNSGLCAMHM 148 (294)
T ss_dssp CEEEECCCHHHHHHHHHH----TCSEEEETTTTCSTTHHHHHSSSSCEEEEECC
T ss_pred eEEEECCCHHHHHHHHHc----CCCEEEECCCCCchHHHHHHHHhCCCEEEECC
Confidence 379999999987766654 99999999999755666677777888877553
No 423
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=37.73 E-value=1e+02 Score=25.06 Aligned_cols=40 Identities=10% Similarity=0.272 Sum_probs=27.9
Q ss_pred HhhhhcCC-CCEEEEECCChHHHHHHHHHHHhcCCCeEEec
Q 024671 50 LASVFDKY-PNMIVVDYTVPAAVNGNAELYSKVGVPFVMGT 89 (264)
Q Consensus 50 l~~~~~~~-~d~VvIDFS~p~~~~~~~~~~~~~g~plViGT 89 (264)
+..+.... +|.+++--..++...+.++.+.+.|+|+|.--
T Consensus 51 i~~l~~~~~vdgii~~~~~~~~~~~~~~~~~~~~ipvV~~~ 91 (276)
T 3ksm_A 51 LSYHLSQAPPDALILAPNSAEDLTPSVAQYRARNIPVLVVD 91 (276)
T ss_dssp HHHHHHHSCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHhCCCCEEEEeCCCHHHHHHHHHHHHHCCCcEEEEe
Confidence 34444456 89655554456677888899999999998754
No 424
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=37.60 E-value=69 Score=29.51 Aligned_cols=65 Identities=15% Similarity=0.180 Sum_probs=42.4
Q ss_pred CCCCEEEEEC----CCh-HHHHHHHHHHHh--cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHHHHH
Q 024671 56 KYPNMIVVDY----TVP-AAVNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVA 120 (264)
Q Consensus 56 ~~~d~VvIDF----S~p-~~~~~~~~~~~~--~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlGv~l 120 (264)
.+.|.|+|-+ ++. ..+...++++.+ .++|+|+--.|-+.++-.++-+.+++|+..++++.-.+.-
T Consensus 316 ~~v~~ilvni~ggi~~~d~vA~gii~a~~~~~~~~Pivvrl~G~n~~~g~~~L~~~gl~~~~~~~~~~Aa~~ 387 (395)
T 2fp4_B 316 PKVEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVHEAQNILTNSGLPITSAVDLEDAAKK 387 (395)
T ss_dssp TTCCEEEEEEEESSSCHHHHHHHHHHHHHHHTCCSCEEEEEEETTHHHHHHHHHHTCSCCEECSSHHHHHHH
T ss_pred CCCCEEEEEecCCccCcHHHHHHHHHHHHhcCCCCeEEEEcCCCCHHHHHHHHHHCCCceEeCCCHHHHHHH
Confidence 4556555543 443 344556666656 7899999887777665444444568999988888776543
No 425
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=37.60 E-value=60 Score=26.91 Aligned_cols=49 Identities=20% Similarity=0.248 Sum_probs=34.0
Q ss_pred HHHHHHHHHHhcCCCeEEec--CCCCHHHHHHHHHccCCcE----EEccchhHHH
Q 024671 70 AVNGNAELYSKVGVPFVMGT--TGGDRVRLHETIENSNVYA----VISPQMGKQV 118 (264)
Q Consensus 70 ~~~~~~~~~~~~g~plViGT--TG~~~~~~~~l~~~~~~~~----v~s~NfSlGv 118 (264)
.+.+.++.+.+.|+++|+.| +|-+...+....+.-+..+ ++++|.+...
T Consensus 25 ~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii~~~~~~~~ 79 (264)
T 3epr_A 25 AGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMATVD 79 (264)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHHHHH
T ss_pred CHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhheecHHHHHHH
Confidence 56788899999999999998 5777766655444434321 6677666543
No 426
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=37.58 E-value=85 Score=28.78 Aligned_cols=66 Identities=12% Similarity=0.202 Sum_probs=44.3
Q ss_pred CCCCEEEEE-C---CC-hHHHHHHHHHHHh--cCCCeEEecCCCCHHHHHHHHHccCCcEEEccchhHHHHHH
Q 024671 56 KYPNMIVVD-Y---TV-PAAVNGNAELYSK--VGVPFVMGTTGGDRVRLHETIENSNVYAVISPQMGKQVVAF 121 (264)
Q Consensus 56 ~~~d~VvID-F---S~-p~~~~~~~~~~~~--~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~NfSlGv~ll 121 (264)
.+.+.++|- | ++ ...+...++++.+ .++|+|+--.|-+.++-.++-+.+++|+..+++|.-.+..+
T Consensus 309 ~~v~~ilvni~ggi~~~~~vA~gii~a~~~~~~~~pivvrl~G~n~~~g~~~l~~~g~~~~~~~~~~~aa~~~ 381 (388)
T 2nu8_B 309 DKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQV 381 (388)
T ss_dssp TTCCEEEEEEESCSSCHHHHHHHHHHHHHHHTCCSCEEEEEESTTHHHHHHHHHTTCSSEEECSSHHHHHHHH
T ss_pred CCCCEEEEEecCCcCCchHHHHHHHHHHHhcCCCCeEEEEeCCCCHHHHHHHHHHCCCceecCCCHHHHHHHH
Confidence 345644554 4 33 3445566666666 78999998888766665555555789999999988766443
No 427
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=37.51 E-value=1.2e+02 Score=25.01 Aligned_cols=40 Identities=8% Similarity=0.066 Sum_probs=24.1
Q ss_pred HhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEecCC
Q 024671 50 LASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTG 91 (264)
Q Consensus 50 l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGTTG 91 (264)
++.+....+|.+|+--+.+ ..+.++.+.+.++|+|+--+.
T Consensus 57 ~~~l~~~~vdgiIi~~~~~--~~~~~~~~~~~~iPvV~~~~~ 96 (291)
T 3egc_A 57 VGQFFERRVDGLILAPSEG--EHDYLRTELPKTFPIVAVNRE 96 (291)
T ss_dssp HHHHHHTTCSEEEECCCSS--CCHHHHHSSCTTSCEEEESSC
T ss_pred HHHHHHCCCCEEEEeCCCC--ChHHHHHhhccCCCEEEEecc
Confidence 3444445788544433332 456677777889998875543
No 428
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=37.41 E-value=1.6e+02 Score=24.83 Aligned_cols=56 Identities=9% Similarity=0.019 Sum_probs=34.1
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHh-----cCCCeEEecCCCCHHHHHHHHHccC-CcEEEccchhHHH
Q 024671 56 KYPNMIVVDYTVPAAVNGNAELYSK-----VGVPFVMGTTGGDRVRLHETIENSN-VYAVISPQMGKQV 118 (264)
Q Consensus 56 ~~~d~VvIDFS~p~~~~~~~~~~~~-----~g~plViGTTG~~~~~~~~l~~~~~-~~~v~s~NfSlGv 118 (264)
..+| +|+ ||+|+++...++.+.+ .++++++ ..+.--+.+.+ .+ .+++.+.+.+...
T Consensus 192 ~~~d-~v~-ftS~s~v~~~~~~~~~~~~~l~~~~~~a----IG~~Ta~~l~~-~G~~~~~va~~~t~~~ 253 (269)
T 3re1_A 192 ERLN-GLV-VSSGQGFEHLLQLAGDSWPDLAGLPLFV----PSPRVASLAQA-AGARNVIDCRGASAAA 253 (269)
T ss_dssp TTCC-EEE-CSSHHHHTTTHHHHGGGHHHHTTSCEEE----SSHHHHHHHHH-HTCSSEEECSSSSHHH
T ss_pred CCCC-EEE-EcCHHHHHHHHHHhhHHHHHHhCCeEEE----ECHHHHHHHHH-CCCCceEECCCCCHHH
Confidence 4578 444 9999999888776633 3455543 33332233333 45 5667788888764
No 429
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=37.35 E-value=1.3e+02 Score=26.70 Aligned_cols=79 Identities=18% Similarity=0.191 Sum_probs=48.1
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+++++.+.+.|..++.. ++..... ..+ ...+++..+++...... .+..|.+.++.+...++.+
T Consensus 57 IG~aia~~La~~Ga~Vvl~-~r~~~~~-~~l-----------~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~ 123 (346)
T 3kvo_A 57 IGKAIALKAAKDGANIVIA-AKTAQPH-PKL-----------LGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKA 123 (346)
T ss_dssp HHHHHHHHHHTTTCEEEEE-ESCCSCC-SSS-----------CCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECChhhh-hhh-----------HHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence 4889999888889888754 3222110 000 01122222222222222 3457999999999999988
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 124 ~~~~g~iDilVnnAG~ 139 (346)
T 3kvo_A 124 IKKFGGIDILVNNASA 139 (346)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 775 78999988774
No 430
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=37.14 E-value=66 Score=26.86 Aligned_cols=72 Identities=21% Similarity=0.182 Sum_probs=44.4
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcC--CCC--EEEEECCChHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDK--YPN--MIVVDYTVPAAVNGNAE 76 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~--~~d--~VvIDFS~p~~~~~~~~ 76 (264)
+|+.+++.+.+.|..++.. ++... .+++..+++... ..+ .+..|+|.++.+.+.++
T Consensus 25 IG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 84 (267)
T 1iy8_A 25 LGRATAVRLAAEGAKLSLV-DVSSE-------------------GLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVT 84 (267)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHH
Confidence 4888888888888887753 32211 111111111111 122 24569999999999888
Q ss_pred HHHhc--CCCeEEecCCC
Q 024671 77 LYSKV--GVPFVMGTTGG 92 (264)
Q Consensus 77 ~~~~~--g~plViGTTG~ 92 (264)
.+.+. ++.+||-..|.
T Consensus 85 ~~~~~~g~id~lv~nAg~ 102 (267)
T 1iy8_A 85 ATTERFGRIDGFFNNAGI 102 (267)
T ss_dssp HHHHHHSCCSEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCc
Confidence 77654 68888887774
No 431
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=37.08 E-value=1.3e+02 Score=25.25 Aligned_cols=40 Identities=25% Similarity=0.233 Sum_probs=26.2
Q ss_pred HhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEec
Q 024671 50 LASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGT 89 (264)
Q Consensus 50 l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGT 89 (264)
+..+....+|.+++--..++.+...++.+.+.|+|+|.-.
T Consensus 50 i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 89 (313)
T 2h3h_A 50 LESFIAEGVNGIAIAPSDPTAVIPTIKKALEMGIPVVTLD 89 (313)
T ss_dssp HHHHHHTTCSEEEECCSSTTTTHHHHHHHHHTTCCEEEES
T ss_pred HHHHHHcCCCEEEEeCCChHHHHHHHHHHHHCCCeEEEeC
Confidence 3333345788555554555555667888888999988643
No 432
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=37.05 E-value=35 Score=30.39 Aligned_cols=32 Identities=16% Similarity=0.132 Sum_probs=17.7
Q ss_pred CCCEEEEECCC-hHHHHHHHHHHHhc-CCCeEEec
Q 024671 57 YPNMIVVDYTV-PAAVNGNAELYSKV-GVPFVMGT 89 (264)
Q Consensus 57 ~~d~VvIDFS~-p~~~~~~~~~~~~~-g~plViGT 89 (264)
.+| ++||.+- ++.+...++.+... |.=+.+|.
T Consensus 262 g~D-~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 262 GVD-FSLECVGNVGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp CBS-EEEECSCCHHHHHHHHHTBCTTTCEEEECSC
T ss_pred CCC-EEEECCCCHHHHHHHHHHhhcCCcEEEEEcC
Confidence 466 6777774 35555555554444 54444554
No 433
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=37.02 E-value=41 Score=30.66 Aligned_cols=81 Identities=23% Similarity=0.246 Sum_probs=45.0
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCCC-----------cccc----------ccccccCceeEeecCCchhhHHhhhhcCCC
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGTE-----------EESG----------QKVEVCGKEIQVHGLSDRESVLASVFDKYP 58 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~~-----------~~~g----------~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~ 58 (264)
+||.+.+++. ++++++|+.-+..+ ...| ..+.+.+..+.+....|.++. + ..+...
T Consensus 13 IGr~v~r~l~~~~~~evvaInd~~~~~~~a~ll~yDs~hG~~~~~v~~~~~~l~v~Gk~i~v~~~~dp~~~-~-w~~~gv 90 (342)
T 2ep7_A 13 IGRSFFRASWGREEIEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVEAKDDSIVVDGKEIKVFAQKDPSQI-P-WGDLGV 90 (342)
T ss_dssp HHHHHHHHHTTCTTCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEECSSEEEETTEEEEEECCSSGGGC-C-HHHHTC
T ss_pred HHHHHHHHHHhCCCceEEEEecCCChHHHhhhhhcccccccCCCcEEEcCCEEEECCEEEEEEEcCChhhC-C-ccccCC
Confidence 4899999887 46899998755211 0011 111223334555432232211 0 111257
Q ss_pred CEEEEECCChHHHHHHHHHHHhcCCC
Q 024671 59 NMIVVDYTVPAAVNGNAELYSKVGVP 84 (264)
Q Consensus 59 d~VvIDFS~p~~~~~~~~~~~~~g~p 84 (264)
| ++++-|-.....+.....++.|..
T Consensus 91 D-iV~estG~~~s~e~a~~hl~aGak 115 (342)
T 2ep7_A 91 D-VVIEATGVFRDRENASKHLQGGAK 115 (342)
T ss_dssp S-EEEECSSSCCBHHHHTTTGGGTCS
T ss_pred C-EEEECCCchhhhhhhHHHHhcCCC
Confidence 7 788876666667777777777765
No 434
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=36.94 E-value=60 Score=27.32 Aligned_cols=69 Identities=12% Similarity=0.113 Sum_probs=45.3
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
+|+++++...+.|..++.. ++.. +.+.+.+.+. ....+..|+|.++.+.+.++.+.+
T Consensus 39 IG~aia~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~ 95 (260)
T 3gem_A 39 VGLHCALRLLEHGHRVIIS-YRTE-------------------HASVTELRQA---GAVALYGDFSCETGIMAFIDLLKT 95 (260)
T ss_dssp HHHHHHHHHHHTTCCEEEE-ESSC-------------------CHHHHHHHHH---TCEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCh-------------------HHHHHHHHhc---CCeEEECCCCCHHHHHHHHHHHHH
Confidence 4888888888888887743 3221 1111112221 233456799999999999988776
Q ss_pred c--CCCeEEecCCC
Q 024671 81 V--GVPFVMGTTGG 92 (264)
Q Consensus 81 ~--g~plViGTTG~ 92 (264)
. ++.+||-..|.
T Consensus 96 ~~g~iD~lv~nAg~ 109 (260)
T 3gem_A 96 QTSSLRAVVHNASE 109 (260)
T ss_dssp HCSCCSEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 4 68889877774
No 435
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=36.86 E-value=80 Score=26.20 Aligned_cols=71 Identities=21% Similarity=0.208 Sum_probs=44.6
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
+|+.+++.+.+.|.+++.. ++.. +.+++....+.. ....+..|.+.++.+.+.++.+.+
T Consensus 24 IG~~ia~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~~~~-~~~~~~~D~~d~~~v~~~~~~~~~ 82 (263)
T 3ak4_A 24 IGAAIARALDKAGATVAIA-DLDV-------------------MAAQAVVAGLEN-GGFAVEVDVTKRASVDAAMQKAID 82 (263)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHHTCTT-CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCH-------------------HHHHHHHHHHhc-CCeEEEEeCCCHHHHHHHHHHHHH
Confidence 3888888888888887743 3221 011121221111 222356799999999988887765
Q ss_pred c--CCCeEEecCCC
Q 024671 81 V--GVPFVMGTTGG 92 (264)
Q Consensus 81 ~--g~plViGTTG~ 92 (264)
. ++.+|+-..|.
T Consensus 83 ~~g~iD~lv~~Ag~ 96 (263)
T 3ak4_A 83 ALGGFDLLCANAGV 96 (263)
T ss_dssp HHTCCCEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 4 68899988875
No 436
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=36.85 E-value=1.5e+02 Score=23.96 Aligned_cols=41 Identities=10% Similarity=0.114 Sum_probs=24.7
Q ss_pred HhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEecCC
Q 024671 50 LASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTG 91 (264)
Q Consensus 50 l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGTTG 91 (264)
+..+....+|.+++--+.+. ..+.++.+.+.|+|+|.--+.
T Consensus 51 ~~~l~~~~vdgiIi~~~~~~-~~~~~~~~~~~~iPvV~~~~~ 91 (272)
T 3o74_A 51 QQLFRARRCDALFVASCLPP-EDDSYRELQDKGLPVIAIDRR 91 (272)
T ss_dssp HHHHHHTTCSEEEECCCCCS-SCCHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHcCCCEEEEecCccc-cHHHHHHHHHcCCCEEEEccC
Confidence 34444457885455333322 255677888899999875443
No 437
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=36.79 E-value=1.7e+02 Score=24.53 Aligned_cols=72 Identities=13% Similarity=0.128 Sum_probs=45.4
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++.. ++.. +.+++..+++.....+ .+..|.|.++.+.+.++.+
T Consensus 38 IG~aia~~la~~G~~V~~~-~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 97 (271)
T 4ibo_A 38 LGRAMAEGLAVAGARILIN-GTDP-------------------SRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARL 97 (271)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CSCH-------------------HHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCH-------------------HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 4888888888888887642 2221 1122222222222233 2346999999999999887
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+|+-..|.
T Consensus 98 ~~~~g~iD~lv~nAg~ 113 (271)
T 4ibo_A 98 DEQGIDVDILVNNAGI 113 (271)
T ss_dssp HHHTCCCCEEEECCCC
T ss_pred HHHCCCCCEEEECCCC
Confidence 764 58889988885
No 438
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=36.77 E-value=76 Score=25.83 Aligned_cols=72 Identities=14% Similarity=0.049 Sum_probs=45.1
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhh-h--cCCCCEEEEECCChHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASV-F--DKYPNMIVVDYTVPAAVNGNAEL 77 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~-~--~~~~d~VvIDFS~p~~~~~~~~~ 77 (264)
+|+.+++.+.+.|.+++.. ++... .+++...++ . ......+..|++.++.+.+.++.
T Consensus 14 iG~~~a~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 73 (250)
T 2cfc_A 14 NGLAIATRFLARGDRVAAL-DLSAE-------------------TLEETARTHWHAYADKVLRVRADVADEGDVNAAIAA 73 (250)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 4889999888888887753 33211 111111111 0 01122356799999999988887
Q ss_pred HHhc--CCCeEEecCCC
Q 024671 78 YSKV--GVPFVMGTTGG 92 (264)
Q Consensus 78 ~~~~--g~plViGTTG~ 92 (264)
+.+. ++.+||-..|.
T Consensus 74 ~~~~~~~id~li~~Ag~ 90 (250)
T 2cfc_A 74 TMEQFGAIDVLVNNAGI 90 (250)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHhCCCCEEEECCCC
Confidence 6654 78899888775
No 439
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=36.69 E-value=1.7e+02 Score=23.68 Aligned_cols=73 Identities=15% Similarity=0.216 Sum_probs=45.8
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCC--CCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKY--PNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~--~d~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|.+++.. ++... +.+++...++.... ...+..|++.++.+.+.++.+
T Consensus 19 iG~~~a~~l~~~G~~V~~~-~r~~~------------------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 79 (258)
T 3afn_B 19 IGLATARLFARAGAKVGLH-GRKAP------------------ANIDETIASMRADGGDAAFFAADLATSEACQQLVDEF 79 (258)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSCC------------------TTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-CCCch------------------hhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence 4889999888889987753 33210 11122122211111 223567999999999988877
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 80 ~~~~g~id~vi~~Ag~ 95 (258)
T 3afn_B 80 VAKFGGIDVLINNAGG 95 (258)
T ss_dssp HHHHSSCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 654 78899988775
No 440
>3c3w_A Two component transcriptional regulatory protein; response regulator, two-component regulatory system, DNA-BIN protein; 2.20A {Mycobacterium tuberculosis}
Probab=36.55 E-value=36 Score=27.61 Aligned_cols=52 Identities=13% Similarity=0.057 Sum_probs=29.7
Q ss_pred chhhHHhhhhcCCCCEEEEECCChH-HHHHHHHHHHhc--CCCeEEecCCCCHHH
Q 024671 45 DRESVLASVFDKYPNMIVVDYTVPA-AVNGNAELYSKV--GVPFVMGTTGGDRVR 96 (264)
Q Consensus 45 dl~~~l~~~~~~~~d~VvIDFS~p~-~~~~~~~~~~~~--g~plViGTTG~~~~~ 96 (264)
+.++++..+....||.|++|...|. .-.+.++...+. .+|+|+=|..-+.+.
T Consensus 35 ~~~~al~~l~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~~~~~~~ 89 (225)
T 3c3w_A 35 SVAEAMARVPAARPDVAVLDVRLPDGNGIELCRDLLSRMPDLRCLILTSYTSDEA 89 (225)
T ss_dssp SHHHHHHHHHHHCCSEEEECSEETTEEHHHHHHHHHHHCTTCEEEEGGGSSSHHH
T ss_pred CHHHHHHHHhhcCCCEEEEeCCCCCCCHHHHHHHHHHhCCCCcEEEEECCCCHHH
Confidence 4455555555557998899999885 234445544442 456555443333433
No 441
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=36.48 E-value=68 Score=28.90 Aligned_cols=51 Identities=18% Similarity=0.175 Sum_probs=40.6
Q ss_pred C-EEEEECCChHHHHHHHHHHHhcCCCeEEecCCCCHHHHHHHHHccCCcEEEccc
Q 024671 59 N-MIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQ 113 (264)
Q Consensus 59 d-~VvIDFS~p~~~~~~~~~~~~~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~N 113 (264)
| .+-||=+.|+.+...++ .|.++|=-.+|+..+++-.++...+.|+|+-++
T Consensus 117 ~vpISIDT~~~~VaeaAl~----aGa~iINDVsg~~d~~m~~vaa~~g~~vVlmh~ 168 (318)
T 2vp8_A 117 DQLISVDTWRAQVAKAACA----AGADLINDTWGGVDPAMPEVAAEFGAGLVCAHT 168 (318)
T ss_dssp TCEEEEECSCHHHHHHHHH----HTCCEEEETTSSSSTTHHHHHHHHTCEEEEECC
T ss_pred CCeEEEeCCCHHHHHHHHH----hCCCEEEECCCCCchHHHHHHHHhCCCEEEECC
Confidence 5 57899999997776665 499999999999766676777777888877665
No 442
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=36.11 E-value=47 Score=28.25 Aligned_cols=32 Identities=28% Similarity=0.233 Sum_probs=23.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHhcCCCeEEec
Q 024671 57 YPNMIVVDYT-VPAAVNGNAELYSKVGVPFVMGT 89 (264)
Q Consensus 57 ~~d~VvIDFS-~p~~~~~~~~~~~~~g~plViGT 89 (264)
.+| +|||-+ ++++-....++|.+.++|+|.|.
T Consensus 121 ~~D-vVi~~~d~~~~~~~l~~~~~~~~~p~i~~~ 153 (249)
T 1jw9_B 121 EHD-LVLDCTDNVAVRNQLNAGCFAAKVPLVSGA 153 (249)
T ss_dssp TSS-EEEECCSSHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCC-EEEEeCCCHHHHHHHHHHHHHcCCCEEEee
Confidence 578 678876 45555666677888888888864
No 443
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=35.88 E-value=1.8e+02 Score=23.84 Aligned_cols=70 Identities=17% Similarity=0.152 Sum_probs=44.7
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|.+++.. ++... ++..+++.....+ .+..|++.++.+...++.+
T Consensus 16 iG~~ia~~l~~~G~~V~~~-~r~~~---------------------~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~ 73 (255)
T 2q2v_A 16 IGLGIAQVLARAGANIVLN-GFGDP---------------------APALAEIARHGVKAVHHPADLSDVAQIEALFALA 73 (255)
T ss_dssp HHHHHHHHHHHTTCEEEEE-CSSCC---------------------HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCch---------------------HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHH
Confidence 4889999888889887753 32210 1111222111222 2346999999999988877
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+|+-..|.
T Consensus 74 ~~~~g~id~lv~~Ag~ 89 (255)
T 2q2v_A 74 EREFGGVDILVNNAGI 89 (255)
T ss_dssp HHHHSSCSEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 664 78899988774
No 444
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=35.80 E-value=74 Score=26.29 Aligned_cols=73 Identities=22% Similarity=0.319 Sum_probs=42.9
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|.+++.. ++... +.+++....+.....+ .+..|++.++.+.+.++.+
T Consensus 33 iG~~la~~l~~~G~~v~~~-~r~~~------------------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~ 93 (274)
T 1ja9_A 33 IGRGIAIELGRRGASVVVN-YGSSS------------------KAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKA 93 (274)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSCH------------------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-cCCch------------------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 3788888887778887653 22110 1111112222111223 3457999999998888766
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+|+-..|.
T Consensus 94 ~~~~~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 94 VSHFGGLDFVMSNSGM 109 (274)
T ss_dssp HHHHSCEEEEECCCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 553 67788877774
No 445
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=35.74 E-value=1.9e+02 Score=23.93 Aligned_cols=72 Identities=14% Similarity=0.121 Sum_probs=45.4
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCC--CCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKY--PNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~--~d~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++.. ++... .+++....+.... ...+..|+|.++.+...++.+
T Consensus 41 IG~~la~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 100 (262)
T 3rkr_A 41 IGAAIARKLGSLGARVVLT-ARDVE-------------------KLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGV 100 (262)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECCHH-------------------HHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHH
Confidence 4888888888888887643 32211 1122222221112 223567999999999988877
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 101 ~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 101 LAAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHhcCCCCEEEECCCc
Confidence 653 68899988886
No 446
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=35.74 E-value=59 Score=26.84 Aligned_cols=39 Identities=10% Similarity=0.236 Sum_probs=24.4
Q ss_pred HhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEe
Q 024671 50 LASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMG 88 (264)
Q Consensus 50 l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViG 88 (264)
+..+....+|.++|--+.++...+.++.+.+.|+|+|+=
T Consensus 50 i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~i 88 (271)
T 2dri_A 50 VQDLTVRGTKILLINPTDSDAVGNAVKMANQANIPVITL 88 (271)
T ss_dssp HHHHTTTTEEEEEECCSSTTTTHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHcCCCEEEEeCCChHHHHHHHHHHHHCCCcEEEe
Confidence 344444567855553334444456678888899998764
No 447
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=35.64 E-value=1.2e+02 Score=25.45 Aligned_cols=72 Identities=17% Similarity=0.178 Sum_probs=44.4
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhh---cCCCCEEEEECCChHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVF---DKYPNMIVVDYTVPAAVNGNAEL 77 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~---~~~~d~VvIDFS~p~~~~~~~~~ 77 (264)
+|+.+++.+.+.|.+++.. ++... .+++..+++. ......+..|++.++.+...++.
T Consensus 38 iG~~la~~L~~~G~~V~~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 97 (302)
T 1w6u_A 38 LGKGMTTLLSSLGAQCVIA-SRKMD-------------------VLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSE 97 (302)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHH
Confidence 4888888888888887753 32211 1111111111 11222356799999999999888
Q ss_pred HHhc--CCCeEEecCCC
Q 024671 78 YSKV--GVPFVMGTTGG 92 (264)
Q Consensus 78 ~~~~--g~plViGTTG~ 92 (264)
+.+. ++.+||-..|.
T Consensus 98 ~~~~~g~id~li~~Ag~ 114 (302)
T 1w6u_A 98 LIKVAGHPNIVINNAAG 114 (302)
T ss_dssp HHHHTCSCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 7653 57888888774
No 448
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=35.64 E-value=1.2e+02 Score=26.54 Aligned_cols=78 Identities=17% Similarity=0.107 Sum_probs=46.9
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCcc--ccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEE--SGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~--~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++.. +..... .+.+ .+.++++.+++...... ++.|++.++.+...++.+
T Consensus 21 IG~~~a~~La~~Ga~Vv~~-~~~~~~~~~~R~------------~~~~~~~~~~l~~~~~~-~~~D~~~~~~~~~~~~~~ 86 (319)
T 1gz6_A 21 LGRAYALAFAERGALVVVN-DLGGDFKGVGKG------------SSAADKVVEEIRRRGGK-AVANYDSVEAGEKLVKTA 86 (319)
T ss_dssp HHHHHHHHHHHTTCEEEEE-CCCBCTTSCBCC------------SHHHHHHHHHHHHTTCE-EEEECCCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-cCCcccccccCC------------HHHHHHHHHHHHhhCCe-EEEeCCCHHHHHHHHHHH
Confidence 4889998888889888753 211100 0000 11222333333222344 578999999888888776
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 87 ~~~~g~iD~lVnnAG~ 102 (319)
T 1gz6_A 87 LDTFGRIDVVVNNAGI 102 (319)
T ss_dssp HHHTSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 653 58888887773
No 449
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=35.50 E-value=86 Score=25.87 Aligned_cols=73 Identities=12% Similarity=0.051 Sum_probs=46.0
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
+|+.+++.+.+.|..++.. ++.... .+.+++..... .....+..|+|.++.+...++.+.+
T Consensus 28 iG~~ia~~l~~~G~~V~~~-~r~~~~----------------~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 28 IAYGIAKACKREGAELAFT-YVGDRF----------------KDRITEFAAEF--GSELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSGGG----------------HHHHHHHHHHT--TCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEE-ecchhh----------------HHHHHHHHHHc--CCcEEEECCCCCHHHHHHHHHHHHH
Confidence 4888998888888887753 322110 00111111111 1234467899999999999998877
Q ss_pred c--CCCeEEecCCC
Q 024671 81 V--GVPFVMGTTGG 92 (264)
Q Consensus 81 ~--g~plViGTTG~ 92 (264)
. ++.+||-..|.
T Consensus 89 ~~g~id~lv~nAg~ 102 (271)
T 3ek2_A 89 HWDSLDGLVHSIGF 102 (271)
T ss_dssp HCSCEEEEEECCCC
T ss_pred HcCCCCEEEECCcc
Confidence 5 67788877774
No 450
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=35.42 E-value=66 Score=26.76 Aligned_cols=71 Identities=14% Similarity=0.108 Sum_probs=45.2
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
+|+.+++.+.++|.+++.. ++.. +.+++..+++ ......+..|.|.++.+...++.+.+
T Consensus 17 IG~~ia~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 75 (254)
T 1hdc_A 17 LGAEAARQAVAAGARVVLA-DVLD-------------------EEGAATAREL-GDAARYQHLDVTIEEDWQRVVAYARE 75 (254)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHHTT-GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCH-------------------HHHHHHHHHh-CCceeEEEecCCCHHHHHHHHHHHHH
Confidence 4889998888889887753 3221 0111212211 01122345799999999998887766
Q ss_pred c--CCCeEEecCCC
Q 024671 81 V--GVPFVMGTTGG 92 (264)
Q Consensus 81 ~--g~plViGTTG~ 92 (264)
. ++.+||-..|.
T Consensus 76 ~~g~iD~lv~nAg~ 89 (254)
T 1hdc_A 76 EFGSVDGLVNNAGI 89 (254)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 4 68899988875
No 451
>3sg0_A Extracellular ligand-binding receptor; structural genomics, PSI-biology; HET: 173; 1.20A {Rhodopseudomonas palustris} PDB: 4dqd_A*
Probab=35.42 E-value=62 Score=27.89 Aligned_cols=57 Identities=9% Similarity=0.026 Sum_probs=39.4
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCC-eEEecCCCCHHHHHHHH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVP-FVMGTTGGDRVRLHETI 101 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~p-lViGTTG~~~~~~~~l~ 101 (264)
.|....+..+....|| +|+=++.+..+...++.+.+.|+. -++|+.|+...++....
T Consensus 201 ~d~~~~~~~~~~~~~d-av~~~~~~~~a~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 258 (386)
T 3sg0_A 201 ASVTGQVLKIIATKPD-AVFIASAGTPAVLPQKALRERGFKGAIYQTHGVATEEFIKLG 258 (386)
T ss_dssp SCCHHHHHHHHHTCCS-EEEEECCSGGGHHHHHHHHHTTCCSEEECCGGGCSHHHHHHH
T ss_pred CcHHHHHHHHHhcCCC-EEEEecCcchHHHHHHHHHHcCCCCcEEeccccCCHHHHHhh
Confidence 3555556666667899 555566666677888999898864 57888888765554443
No 452
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=35.38 E-value=17 Score=32.55 Aligned_cols=19 Identities=21% Similarity=0.281 Sum_probs=13.1
Q ss_pred ChHHHHHHHHhCCCeEEEE
Q 024671 1 MGKAVIKAADAAGLELVPV 19 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~ 19 (264)
+|..+++.+...|.++++.
T Consensus 201 vG~~a~qla~~~Ga~Vi~~ 219 (363)
T 3uog_A 201 VALFGLQIAKATGAEVIVT 219 (363)
T ss_dssp HHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHcCCEEEEE
Confidence 4777777777777776643
No 453
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=35.31 E-value=68 Score=28.41 Aligned_cols=16 Identities=19% Similarity=0.420 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHhcCCC
Q 024671 69 AAVNGNAELYSKVGVP 84 (264)
Q Consensus 69 ~~~~~~~~~~~~~g~p 84 (264)
+++..++++.++.|+.
T Consensus 33 ~~l~~lv~~li~~Gv~ 48 (314)
T 3d0c_A 33 KGLDDNVEFLLQNGIE 48 (314)
T ss_dssp HHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCC
Confidence 3344444444444443
No 454
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=35.27 E-value=1.2e+02 Score=26.03 Aligned_cols=42 Identities=5% Similarity=-0.059 Sum_probs=25.5
Q ss_pred hHHHHHHHHHHHhcCCCeEEecCCCCHHHHHHHHHccCCcEE
Q 024671 68 PAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSNVYAV 109 (264)
Q Consensus 68 p~~~~~~~~~~~~~g~plViGTTG~~~~~~~~l~~~~~~~~v 109 (264)
|..+.+.++.+.+++++.|.--+.++....+.+++..+++++
T Consensus 209 ~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~g~~v~ 250 (284)
T 2prs_A 209 AQRLHEIRTQLVEQKATCVFAEPQFRPAVVESVARGTSVRMG 250 (284)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECTTSCSHHHHHHTTTSCCEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHcCCeEE
Confidence 455666666666666666666666666555556555555543
No 455
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=35.24 E-value=1.2e+02 Score=27.09 Aligned_cols=67 Identities=4% Similarity=-0.142 Sum_probs=40.2
Q ss_pred HHhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCCeEEecCCCCH--------HHHHHHHHccCCcEEE----ccchh
Q 024671 49 VLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDR--------VRLHETIENSNVYAVI----SPQMG 115 (264)
Q Consensus 49 ~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~plViGTTG~~~--------~~~~~l~~~~~~~~v~----s~NfS 115 (264)
.|+...+...-+-.+.+.+-+.+...++.|.+.+.|+++.++-+.. ..+..+++.+.+|+++ +.++.
T Consensus 18 ll~~A~~~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~g~~~~~~~~~~A~~~~VPVaLHlDHg~~~e 96 (306)
T 3pm6_A 18 LLTFARTHSFAIPAICVYNLEGILAIIRAAEHKRSPAMILLFPWAIQYADSLLVRTAASACRAASVPITLHLDHAQDPE 96 (306)
T ss_dssp HHHHHHHTTCCEEEEECSSHHHHHHHHHHHHHTTCCEEEEECHHHHHHHTTHHHHHHHHHHHHCSSCEEEEEEEECCHH
T ss_pred HHHHHHHCCcEEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhccHHHHHHHHHHHHHCCCCEEEEcCCCCCHH
Confidence 3444333444445777788888888888888888888887652211 1223345556677755 55553
No 456
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=35.12 E-value=1.7e+02 Score=24.61 Aligned_cols=32 Identities=19% Similarity=0.271 Sum_probs=25.8
Q ss_pred EEEECCChHHHHHHHHHHHhc--CCCeEEecCCC
Q 024671 61 IVVDYTVPAAVNGNAELYSKV--GVPFVMGTTGG 92 (264)
Q Consensus 61 VvIDFS~p~~~~~~~~~~~~~--g~plViGTTG~ 92 (264)
+..|++.++.+...++.+.+. ++.+||-..|.
T Consensus 77 ~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~ 110 (303)
T 1yxm_A 77 IQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGG 110 (303)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred EecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 457999999999888877653 68899988884
No 457
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=35.02 E-value=59 Score=27.29 Aligned_cols=75 Identities=15% Similarity=0.170 Sum_probs=46.3
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++...+.|..++.. ++.... .+.+++..+++.....+ .+..|+|.++.+...++.+
T Consensus 23 IG~aia~~la~~G~~V~~~-~r~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 85 (262)
T 3ksu_A 23 LGALTAKTFALESVNLVLH-YHQAKD----------------SDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFA 85 (262)
T ss_dssp HHHHHHHHHTTSSCEEEEE-ESCGGG----------------HHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ecCccC----------------HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence 4788888888888887743 221100 01122222222222222 3457999999999999988
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.++|-..|.
T Consensus 86 ~~~~g~iD~lvnnAg~ 101 (262)
T 3ksu_A 86 EKEFGKVDIAINTVGK 101 (262)
T ss_dssp HHHHCSEEEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 775 67888888884
No 458
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=34.94 E-value=1.1e+02 Score=25.69 Aligned_cols=72 Identities=14% Similarity=0.073 Sum_probs=44.6
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhh-hcCCCC--EEEEECCChHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASV-FDKYPN--MIVVDYTVPAAVNGNAEL 77 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~-~~~~~d--~VvIDFS~p~~~~~~~~~ 77 (264)
+|+.+++.+.+.|.+++.. ++... .+++...++ ...... .+..|.|.++.+...++.
T Consensus 33 IG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 92 (267)
T 1vl8_A 33 LGFGIAQGLAEAGCSVVVA-SRNLE-------------------EASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEA 92 (267)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence 4888998888888887753 32210 111111111 001122 245699999999998887
Q ss_pred HHhc--CCCeEEecCCC
Q 024671 78 YSKV--GVPFVMGTTGG 92 (264)
Q Consensus 78 ~~~~--g~plViGTTG~ 92 (264)
+.+. ++.+||-..|.
T Consensus 93 ~~~~~g~iD~lvnnAg~ 109 (267)
T 1vl8_A 93 VKEKFGKLDTVVNAAGI 109 (267)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCc
Confidence 7654 68889888775
No 459
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=34.91 E-value=1.8e+02 Score=24.90 Aligned_cols=71 Identities=17% Similarity=0.135 Sum_probs=40.6
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCC-ccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTE-EESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYS 79 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~-~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~ 79 (264)
.|+.|++.+.+.|+++.+. .+.. ... ..+ ..+..+.......+..|++.++.+.+.++
T Consensus 22 iG~~l~~~L~~~g~~V~~l-~R~~~~~~----------------~~~-~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~--- 80 (346)
T 3i6i_A 22 IGQFVATASLDAHRPTYIL-ARPGPRSP----------------SKA-KIFKALEDKGAIIVYGLINEQEAMEKILK--- 80 (346)
T ss_dssp HHHHHHHHHHHTTCCEEEE-ECSSCCCH----------------HHH-HHHHHHHHTTCEEEECCTTCHHHHHHHHH---
T ss_pred HHHHHHHHHHHCCCCEEEE-ECCCCCCh----------------hHH-HHHHHHHhCCcEEEEeecCCHHHHHHHHh---
Confidence 3888998888778887754 3321 000 000 01112222234445678888777666554
Q ss_pred hcCCCeEEecCCC
Q 024671 80 KVGVPFVMGTTGG 92 (264)
Q Consensus 80 ~~g~plViGTTG~ 92 (264)
+.++.+|+-+.|.
T Consensus 81 ~~~~d~Vi~~a~~ 93 (346)
T 3i6i_A 81 EHEIDIVVSTVGG 93 (346)
T ss_dssp HTTCCEEEECCCG
T ss_pred hCCCCEEEECCch
Confidence 3578888888876
No 460
>3a1s_A Iron(II) transport protein B; FEOB, iron transporter, small GTPase, G protein, GDI; HET: GDP; 1.50A {Thermotoga maritima} PDB: 3a1t_A* 3a1u_A* 3a1v_A* 3a1w_A
Probab=34.83 E-value=94 Score=26.28 Aligned_cols=73 Identities=14% Similarity=0.054 Sum_probs=51.7
Q ss_pred CCC--EEEEECCChHHHHHHHHHHHhcCCCeEEecCCCCHH-------HHHHHHHccCCcEE-EccchhHHHHHHHHHHH
Q 024671 57 YPN--MIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRV-------RLHETIENSNVYAV-ISPQMGKQVVAFLAAME 126 (264)
Q Consensus 57 ~~d--~VvIDFS~p~~~~~~~~~~~~~g~plViGTTG~~~~-------~~~~l~~~~~~~~v-~s~NfSlGv~ll~~~~~ 126 (264)
.+| .+|+|-|+++..........+.++|+|+--+-.+.. +.+.+++.-+.|++ .|+.-..|+.-++..+.
T Consensus 83 ~~d~ii~V~D~t~~~~~~~~~~~l~~~~~pvilv~NK~Dl~~~~~i~~~~~~l~~~lg~~vi~~SA~~g~gi~el~~~i~ 162 (258)
T 3a1s_A 83 DADLVILVADSVNPEQSLYLLLEILEMEKKVILAMTAIDEAKKTGMKIDRYELQKHLGIPVVFTSSVTGEGLEELKEKIV 162 (258)
T ss_dssp CCSEEEEEEETTSCHHHHHHHHHHHTTTCCEEEEEECHHHHHHTTCCBCHHHHHHHHCSCEEECCTTTCTTHHHHHHHHH
T ss_pred CCCEEEEEeCCCchhhHHHHHHHHHhcCCCEEEEEECcCCCCccchHHHHHHHHHHcCCCEEEEEeeCCcCHHHHHHHHH
Confidence 577 457899999888888888888999998877765432 24556666677875 57777788876666544
Q ss_pred HHH
Q 024671 127 IMA 129 (264)
Q Consensus 127 ~aa 129 (264)
..+
T Consensus 163 ~~~ 165 (258)
T 3a1s_A 163 EYA 165 (258)
T ss_dssp HHH
T ss_pred HHh
Confidence 433
No 461
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=34.78 E-value=1.8e+02 Score=24.96 Aligned_cols=55 Identities=13% Similarity=-0.013 Sum_probs=37.2
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCC---eEEecCCCCHHHHHHH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVP---FVMGTTGGDRVRLHET 100 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~p---lViGTTG~~~~~~~~l 100 (264)
.|....+..+....|| +|+=++.+..+...++.+.+.|+. .++|..+++. ++..+
T Consensus 182 ~d~~~~l~~i~~~~~d-~v~~~~~~~~~~~~~~~~~~~g~~~~~~i~g~~~~~~-~~~~~ 239 (375)
T 3i09_A 182 SDFSSFLLQAQSSKAQ-ILGLANAGGDTVNAIKAAKEFGITKTMKLAALLMFIN-DVHAL 239 (375)
T ss_dssp SCCHHHHHHHHHTCCS-EEEEECCHHHHHHHHHHHHHTTGGGTCEEEESSCCHH-HHHHH
T ss_pred ccHHHHHHHHHhCCCC-EEEEecCchhHHHHHHHHHHcCCCcCceEEecccchh-hHhhh
Confidence 4566666666667899 455566666667889999888764 5788766644 45444
No 462
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=34.78 E-value=98 Score=25.89 Aligned_cols=85 Identities=12% Similarity=0.052 Sum_probs=49.1
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++.. +......... .+....+.+++....+.....+ .+..|.|.++.+.+.++.+
T Consensus 25 IG~~ia~~l~~~G~~V~~~-~r~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 96 (278)
T 3sx2_A 25 QGRAHAVRLAADGADIIAV-DLCDQIASVP-------YPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQAG 96 (278)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ECCSCCTTCS-------SCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEEE-eccccccccc-------ccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 4889998888889987753 3221100000 0000011222222222211223 3457999999999999888
Q ss_pred Hhc--CCCeEEecCCCC
Q 024671 79 SKV--GVPFVMGTTGGD 93 (264)
Q Consensus 79 ~~~--g~plViGTTG~~ 93 (264)
.+. ++.+||-..|..
T Consensus 97 ~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 97 LDELGRLDIVVANAGIA 113 (278)
T ss_dssp HHHHCCCCEEEECCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 775 788999888863
No 463
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=34.55 E-value=1.2e+02 Score=22.91 Aligned_cols=47 Identities=17% Similarity=0.244 Sum_probs=28.4
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChHH-HHHHHHHHHh-cCCCeEEecC
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPAA-VNGNAELYSK-VGVPFVMGTT 90 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~~-~~~~~~~~~~-~g~plViGTT 90 (264)
.+.++++..+....+|.|++|...|.. -.+.++...+ ...|+|+-|+
T Consensus 58 ~~~~~al~~l~~~~~dlvilD~~l~~~~g~~l~~~lr~~~~~~ii~~s~ 106 (164)
T 3t8y_A 58 KDGLEAVEKAIELKPDVITMDIEMPNLNGIEALKLIMKKAPTRVIMVSS 106 (164)
T ss_dssp SSHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHHSCCEEEEEES
T ss_pred CCHHHHHHHhccCCCCEEEEeCCCCCCCHHHHHHHHHhcCCceEEEEec
Confidence 456666666666679988999988752 2334444333 3455555444
No 464
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=34.48 E-value=72 Score=26.88 Aligned_cols=72 Identities=14% Similarity=0.142 Sum_probs=45.2
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcC-----CCCEEEEECCChHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDK-----YPNMIVVDYTVPAAVNGNA 75 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~-----~~d~VvIDFS~p~~~~~~~ 75 (264)
+|+.+++.+.+.|.+++.. ++... .+++..+++... ....+..|+|.++.+...+
T Consensus 18 IG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 77 (280)
T 1xkq_A 18 IGRTTAILFAQEGANVTIT-GRSSE-------------------RLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQII 77 (280)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHH
Confidence 4889998888889887753 33211 111111211111 1223457999999999998
Q ss_pred HHHHhc--CCCeEEecCCC
Q 024671 76 ELYSKV--GVPFVMGTTGG 92 (264)
Q Consensus 76 ~~~~~~--g~plViGTTG~ 92 (264)
+.+.+. ++.+||-..|.
T Consensus 78 ~~~~~~~g~iD~lv~nAg~ 96 (280)
T 1xkq_A 78 NSTLKQFGKIDVLVNNAGA 96 (280)
T ss_dssp HHHHHHHSCCCEEEECCCC
T ss_pred HHHHHhcCCCCEEEECCCC
Confidence 887663 68888887774
No 465
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=34.44 E-value=1.9e+02 Score=23.74 Aligned_cols=72 Identities=18% Similarity=0.234 Sum_probs=45.5
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhc---C-CCCEEEEECCChHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFD---K-YPNMIVVDYTVPAAVNGNAE 76 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~---~-~~d~VvIDFS~p~~~~~~~~ 76 (264)
+|+.+++.+.+.|.+++.. ++... .+++..+++.. . ....+..|++.++.+...++
T Consensus 19 IG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 78 (260)
T 2z1n_A 19 LGFASALELARNGARLLLF-SRNRE-------------------KLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFE 78 (260)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHH
Confidence 4889998888888887753 32211 11111111111 0 22234579999999999988
Q ss_pred HHHhc-CCCeEEecCCC
Q 024671 77 LYSKV-GVPFVMGTTGG 92 (264)
Q Consensus 77 ~~~~~-g~plViGTTG~ 92 (264)
.+.+. |+.+|+-..|.
T Consensus 79 ~~~~~~gid~lv~~Ag~ 95 (260)
T 2z1n_A 79 KARDLGGADILVYSTGG 95 (260)
T ss_dssp HHHHTTCCSEEEECCCC
T ss_pred HHHHhcCCCEEEECCCC
Confidence 77653 68899988885
No 466
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=34.33 E-value=91 Score=24.55 Aligned_cols=19 Identities=21% Similarity=0.492 Sum_probs=15.9
Q ss_pred ChHHHHHHHHhCCCeEEEE
Q 024671 1 MGKAVIKAADAAGLELVPV 19 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~ 19 (264)
+|+.+++.+.++|+++++.
T Consensus 12 iG~~l~~~L~~~g~~V~~~ 30 (221)
T 3ew7_A 12 AGSRILEEAKNRGHEVTAI 30 (221)
T ss_dssp HHHHHHHHHHHTTCEEEEE
T ss_pred hHHHHHHHHHhCCCEEEEE
Confidence 3899999988889998864
No 467
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=34.26 E-value=1.2e+02 Score=25.60 Aligned_cols=73 Identities=15% Similarity=0.223 Sum_probs=44.4
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++.. ++.... .+++..+.+.....+ .+..|.+.++.+...++.+
T Consensus 41 IG~~ia~~l~~~G~~V~~~-~r~~~~------------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 101 (283)
T 1g0o_A 41 IGREMAMELGRRGCKVIVN-YANSTE------------------SAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEA 101 (283)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSCHH------------------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCchH------------------HHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHH
Confidence 4888888888888887753 222100 011111111111222 3457999999999888877
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 102 ~~~~g~iD~lv~~Ag~ 117 (283)
T 1g0o_A 102 VKIFGKLDIVCSNSGV 117 (283)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 653 68889888775
No 468
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=34.23 E-value=1.2e+02 Score=25.30 Aligned_cols=91 Identities=10% Similarity=0.030 Sum_probs=48.6
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
||+.+++.+.+.|+++.. +++.+.... .+ ...++......+++++ ..+| +||-.+-|..+.+.++....
T Consensus 11 ~G~~~a~~l~~~g~~V~~-~~~~~~~~~-~~--~~~g~~~~~~~~~~~~------~~~D-~vi~av~~~~~~~~~~~l~~ 79 (279)
T 2f1k_A 11 IGASLAGDLRRRGHYLIG-VSRQQSTCE-KA--VERQLVDEAGQDLSLL------QTAK-IIFLCTPIQLILPTLEKLIP 79 (279)
T ss_dssp HHHHHHHHHHHTTCEEEE-ECSCHHHHH-HH--HHTTSCSEEESCGGGG------TTCS-EEEECSCHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHCCCEEEE-EECCHHHHH-HH--HhCCCCccccCCHHHh------CCCC-EEEEECCHHHHHHHHHHHHh
Confidence 789999888878888764 454322110 01 0111110001233322 2578 78888888877777776544
Q ss_pred c--CCCeEEecCCCCHHHHHHHHH
Q 024671 81 V--GVPFVMGTTGGDRVRLHETIE 102 (264)
Q Consensus 81 ~--g~plViGTTG~~~~~~~~l~~ 102 (264)
. .-.+|+=+++.+...++.+.+
T Consensus 80 ~~~~~~~vv~~~~~~~~~~~~~~~ 103 (279)
T 2f1k_A 80 HLSPTAIVTDVASVKTAIAEPASQ 103 (279)
T ss_dssp GSCTTCEEEECCSCCHHHHHHHHH
T ss_pred hCCCCCEEEECCCCcHHHHHHHHH
Confidence 2 123555566666554554433
No 469
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=34.22 E-value=83 Score=27.54 Aligned_cols=19 Identities=21% Similarity=0.326 Sum_probs=13.2
Q ss_pred ChHHHHHHHHhCCCeEEEE
Q 024671 1 MGKAVIKAADAAGLELVPV 19 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~ 19 (264)
+|..+++.+...|.++++.
T Consensus 177 vG~~a~qla~~~Ga~Vi~~ 195 (349)
T 3pi7_A 177 LCKLIIGLAKEEGFRPIVT 195 (349)
T ss_dssp HHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEE
Confidence 3777777777677776653
No 470
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=34.21 E-value=1.9e+02 Score=23.57 Aligned_cols=73 Identities=8% Similarity=-0.024 Sum_probs=46.0
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcC--CCCEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDK--YPNMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~--~~d~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|..++....+... .+++.+..+... ....+..|.+.++.+...++.+
T Consensus 25 iG~~ia~~l~~~G~~v~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 85 (256)
T 3ezl_A 25 IGTSICQRLHKDGFRVVAGCGPNSP-------------------RRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKV 85 (256)
T ss_dssp HHHHHHHHHHHTTEEEEEEECTTCS-------------------SHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCHH-------------------HHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHH
Confidence 4889998888889887754322211 111112222111 2233567999999999999887
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 86 ~~~~g~id~lv~~Ag~ 101 (256)
T 3ezl_A 86 KAEVGEIDVLVNNAGI 101 (256)
T ss_dssp HHHTCCEEEEEECCCC
T ss_pred HHhcCCCCEEEECCCC
Confidence 765 67788887775
No 471
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=34.20 E-value=1e+02 Score=25.43 Aligned_cols=72 Identities=13% Similarity=0.143 Sum_probs=44.0
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCC--EEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPN--MIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d--~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|.+++.. ++... .+++..+++.....+ .+..|.+.++.+...++.+
T Consensus 26 IG~~ia~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~ 85 (260)
T 2zat_A 26 IGLAIARRLAQDGAHVVVS-SRKQE-------------------NVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMA 85 (260)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence 4888888888888887753 32210 111112222111222 2457999999998888877
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.+||-..|.
T Consensus 86 ~~~~g~iD~lv~~Ag~ 101 (260)
T 2zat_A 86 VNLHGGVDILVSNAAV 101 (260)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCC
Confidence 653 68888877664
No 472
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=34.16 E-value=1.3e+02 Score=24.71 Aligned_cols=70 Identities=11% Similarity=-0.004 Sum_probs=45.2
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
+|+.+++.+.+.|..++.. ++.. +.+++...++. ....+..|.|.++.+.+.++.+.+
T Consensus 14 IG~~ia~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~ 71 (247)
T 3dii_A 14 IGKQICLDFLEAGDKVCFI-DIDE-------------------KRSADFAKERP--NLFYFHGDVADPLTLKKFVEYAME 71 (247)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHTTCT--TEEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCH-------------------HHHHHHHHhcc--cCCeEEeeCCCHHHHHHHHHHHHH
Confidence 4889999888889887753 3221 01111111110 111356799999999999988777
Q ss_pred c--CCCeEEecCCC
Q 024671 81 V--GVPFVMGTTGG 92 (264)
Q Consensus 81 ~--g~plViGTTG~ 92 (264)
. ++.+++-..|.
T Consensus 72 ~~g~id~lv~nAg~ 85 (247)
T 3dii_A 72 KLQRIDVLVNNACR 85 (247)
T ss_dssp HHSCCCEEEECCC-
T ss_pred HcCCCCEEEECCCC
Confidence 4 78899988875
No 473
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=34.01 E-value=93 Score=27.55 Aligned_cols=29 Identities=14% Similarity=0.275 Sum_probs=15.3
Q ss_pred EEECCChHHHHHHHHHHHhcCCCeEEecC
Q 024671 62 VVDYTVPAAVNGNAELYSKVGVPFVMGTT 90 (264)
Q Consensus 62 vIDFS~p~~~~~~~~~~~~~g~plViGTT 90 (264)
.+.+.+-+.+...++.|.+.+.|+++.++
T Consensus 22 AfNv~n~e~~~avl~AAe~~~sPvIlq~s 50 (286)
T 1gvf_A 22 AFNIHNAETIQAILEVCSEMRSPVILAGT 50 (286)
T ss_dssp EEECCSHHHHHHHHHHHHHHTCCCEEEEC
T ss_pred EEeeCCHHHHHHHHHHHHHhCCCEEEECC
Confidence 45555555555555555555555555444
No 474
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=34.00 E-value=66 Score=27.66 Aligned_cols=72 Identities=13% Similarity=0.160 Sum_probs=44.6
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcC-----CCCEEEEECCChHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDK-----YPNMIVVDYTVPAAVNGNA 75 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~-----~~d~VvIDFS~p~~~~~~~ 75 (264)
+|+.+++.+.+.|..++.. ++... .+++..+++... ....+..|++.++.+...+
T Consensus 38 IG~aia~~L~~~G~~V~~~-~r~~~-------------------~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 97 (297)
T 1xhl_A 38 IGRSAAVIFAKEGAQVTIT-GRNED-------------------RLEETKQQILKAGVPAEKINAVVADVTEASGQDDII 97 (297)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHH
Confidence 3788888888888887743 32211 111111211111 1223467999999999998
Q ss_pred HHHHhc--CCCeEEecCCC
Q 024671 76 ELYSKV--GVPFVMGTTGG 92 (264)
Q Consensus 76 ~~~~~~--g~plViGTTG~ 92 (264)
+.+.+. ++.+||-..|.
T Consensus 98 ~~~~~~~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 98 NTTLAKFGKIDILVNNAGA 116 (297)
T ss_dssp HHHHHHHSCCCEEEECCCC
T ss_pred HHHHHhcCCCCEEEECCCc
Confidence 877664 68888888774
No 475
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=33.95 E-value=1.1e+02 Score=26.22 Aligned_cols=53 Identities=9% Similarity=0.045 Sum_probs=38.8
Q ss_pred CchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHhcCCC-eEEecCCCCHHHH
Q 024671 44 SDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSKVGVP-FVMGTTGGDRVRL 97 (264)
Q Consensus 44 ~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~~g~p-lViGTTG~~~~~~ 97 (264)
.|....+..+....|| +|+=++.+..+...++.+.+.|+. .++|+.|+...++
T Consensus 183 ~d~~~~~~~l~~~~~d-~v~~~~~~~~a~~~~~~~~~~g~~~~~i~~~~~~~~~~ 236 (364)
T 3lop_A 183 ANVGPAVDKLLAADVQ-AIFLGATAEPAAQFVRQYRARGGEAQLLGLSSIDPGIL 236 (364)
T ss_dssp CCCHHHHHHHHHSCCS-EEEEESCHHHHHHHHHHHHHTTCCCEEEECTTSCHHHH
T ss_pred ccHHHHHHHHHhCCCC-EEEEecCcHHHHHHHHHHHHcCCCCeEEEeccCChHHH
Confidence 4556666666667899 566667777788899999998753 4778888876554
No 476
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=33.92 E-value=1.5e+02 Score=24.82 Aligned_cols=79 Identities=14% Similarity=0.116 Sum_probs=47.8
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCC--CEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYP--NMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~--d~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++...+.|..++.. ++..... +.. .+.+++....+..... ..+..|+|.++.+...++.+
T Consensus 18 IG~aia~~la~~G~~V~~~-~r~~~~~-~~~-----------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 84 (274)
T 3e03_A 18 IGLAIALRAARDGANVAIA-AKSAVAN-PKL-----------PGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT 84 (274)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCCSCC-TTS-----------CCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eccchhh-hhh-----------HHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 4899999888889987753 3322110 000 0112222221111112 23567999999999999988
Q ss_pred Hhc--CCCeEEecCCC
Q 024671 79 SKV--GVPFVMGTTGG 92 (264)
Q Consensus 79 ~~~--g~plViGTTG~ 92 (264)
.+. ++.++|-..|.
T Consensus 85 ~~~~g~iD~lvnnAG~ 100 (274)
T 3e03_A 85 VDTFGGIDILVNNASA 100 (274)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHcCCCCEEEECCCc
Confidence 775 78899988885
No 477
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=33.81 E-value=69 Score=26.94 Aligned_cols=83 Identities=16% Similarity=0.162 Sum_probs=43.9
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCcc---cccc--c-cccCceeEeec--CCchhhHHhhhhcCCCCEEEEECCCh---H
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEE---SGQK--V-EVCGKEIQVHG--LSDRESVLASVFDKYPNMIVVDYTVP---A 69 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~---~g~~--~-~~~~~~i~i~~--~~dl~~~l~~~~~~~~d~VvIDFS~p---~ 69 (264)
.|+.+++.+.+.|+++.+ +.+.... ..+. + .....++.+.. ..|.+. +.+..+ .+| +||....+ .
T Consensus 16 iG~~l~~~L~~~g~~V~~-l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~-l~~~~~-~~d-~vi~~a~~~~~~ 91 (308)
T 1qyc_A 16 IGRHVAKASLDLGHPTFL-LVRESTASSNSEKAQLLESFKASGANIVHGSIDDHAS-LVEAVK-NVD-VVISTVGSLQIE 91 (308)
T ss_dssp THHHHHHHHHHTTCCEEE-ECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHH-HHHHHH-TCS-EEEECCCGGGSG
T ss_pred HHHHHHHHHHhCCCCEEE-EECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHH-HHHHHc-CCC-EEEECCcchhhh
Confidence 589999999888888875 3432210 0000 0 00111222211 112222 222222 578 78888764 4
Q ss_pred HHHHHHHHHHhcC-CCeEE
Q 024671 70 AVNGNAELYSKVG-VPFVM 87 (264)
Q Consensus 70 ~~~~~~~~~~~~g-~plVi 87 (264)
.....++.|.+.| ++-++
T Consensus 92 ~~~~l~~aa~~~g~v~~~v 110 (308)
T 1qyc_A 92 SQVNIIKAIKEVGTVKRFF 110 (308)
T ss_dssp GGHHHHHHHHHHCCCSEEE
T ss_pred hHHHHHHHHHhcCCCceEe
Confidence 5677888888887 76555
No 478
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=33.81 E-value=41 Score=29.49 Aligned_cols=15 Identities=20% Similarity=0.368 Sum_probs=9.4
Q ss_pred cCCCeEEecCCCCHH
Q 024671 81 VGVPFVMGTTGGDRV 95 (264)
Q Consensus 81 ~g~plViGTTG~~~~ 95 (264)
.++|+++||.+.+.+
T Consensus 68 gr~pviaGvg~~~t~ 82 (292)
T 2vc6_A 68 GRVPVIAGAGSNSTA 82 (292)
T ss_dssp TSSCBEEECCCSSHH
T ss_pred CCCcEEEecCCccHH
Confidence 357777777666543
No 479
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=33.80 E-value=1.6e+02 Score=26.49 Aligned_cols=83 Identities=17% Similarity=0.098 Sum_probs=43.7
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
||+.+++.+.+.|+++.. .++.+... +. ....++.. ..++++++... ..|| +||=...+..+.+.++....
T Consensus 33 mG~~~A~~L~~~G~~V~v-~dr~~~~~-~~--l~~~g~~~--~~s~~e~~~~a--~~~D-vVi~~vp~~~v~~vl~~l~~ 103 (358)
T 4e21_A 33 MGADMVRRLRKGGHECVV-YDLNVNAV-QA--LEREGIAG--ARSIEEFCAKL--VKPR-VVWLMVPAAVVDSMLQRMTP 103 (358)
T ss_dssp HHHHHHHHHHHTTCEEEE-ECSCHHHH-HH--HHTTTCBC--CSSHHHHHHHS--CSSC-EEEECSCGGGHHHHHHHHGG
T ss_pred HHHHHHHHHHhCCCEEEE-EeCCHHHH-HH--HHHCCCEE--eCCHHHHHhcC--CCCC-EEEEeCCHHHHHHHHHHHHh
Confidence 799999888888998874 45433211 00 11112222 24555554432 2358 44444444466666654433
Q ss_pred ---cCCCeEEecCCC
Q 024671 81 ---VGVPFVMGTTGG 92 (264)
Q Consensus 81 ---~g~plViGTTG~ 92 (264)
.+.-+|.++|+.
T Consensus 104 ~l~~g~iiId~st~~ 118 (358)
T 4e21_A 104 LLAANDIVIDGGNSH 118 (358)
T ss_dssp GCCTTCEEEECSSCC
T ss_pred hCCCCCEEEeCCCCC
Confidence 355566666665
No 480
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=33.73 E-value=72 Score=26.68 Aligned_cols=20 Identities=20% Similarity=0.360 Sum_probs=16.4
Q ss_pred ChHHHHHHHHhCCCeEEEEE
Q 024671 1 MGKAVIKAADAAGLELVPVS 20 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~ 20 (264)
.|+.+++.+.+.|+++++..
T Consensus 14 iG~~l~~~L~~~g~~V~~~~ 33 (286)
T 3gpi_A 14 LGLELARRLTAQGHEVTGLR 33 (286)
T ss_dssp HHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEe
Confidence 38999999888899988653
No 481
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=33.64 E-value=74 Score=26.67 Aligned_cols=72 Identities=19% Similarity=0.218 Sum_probs=45.9
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhh---cCCCCEEEEECCChHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVF---DKYPNMIVVDYTVPAAVNGNAEL 77 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~---~~~~d~VvIDFS~p~~~~~~~~~ 77 (264)
+|+.+++.+.+.|..++.. ++.. +.+++..+++. ......+..|.|.++.+...++.
T Consensus 32 IG~aia~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 91 (266)
T 4egf_A 32 IGADIARAFAAAGARLVLS-GRDV-------------------SELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARR 91 (266)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCH-------------------HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 4888888888888887643 3221 11122222211 11222356799999999999988
Q ss_pred HHhc--CCCeEEecCCC
Q 024671 78 YSKV--GVPFVMGTTGG 92 (264)
Q Consensus 78 ~~~~--g~plViGTTG~ 92 (264)
+.+. ++.+||-..|.
T Consensus 92 ~~~~~g~id~lv~nAg~ 108 (266)
T 4egf_A 92 AAEAFGGLDVLVNNAGI 108 (266)
T ss_dssp HHHHHTSCSEEEEECCC
T ss_pred HHHHcCCCCEEEECCCc
Confidence 7765 78889888775
No 482
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=33.61 E-value=79 Score=28.48 Aligned_cols=88 Identities=15% Similarity=0.183 Sum_probs=49.7
Q ss_pred ChHHHHHHHHhCCCeEEEEEcC-----------CCccccc----------cccccCceeEeecCCchhhHHhhhhcCCCC
Q 024671 1 MGKAVIKAADAAGLELVPVSFG-----------TEEESGQ----------KVEVCGKEIQVHGLSDRESVLASVFDKYPN 59 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~-----------~~~~~g~----------~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d 59 (264)
.||.+.+++.++++++++.-+. .....|+ .+.+.+..+.+....|.++. . ..+...|
T Consensus 11 IGr~vlr~l~~~~~evvaind~~~~~~~a~ll~~ds~~G~~~~~v~~~~~~l~v~g~~i~v~~~~dp~~l-~-w~~~gvD 88 (331)
T 2g82_O 11 IGRQVFRILHSRGVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKEI-P-WAEAGVG 88 (331)
T ss_dssp HHHHHHHHHHHHTCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGGS-C-TTTTTEE
T ss_pred HHHHHHHHHHhCCCEEEEEecCCCHHHHhHhhhccccCCCCCceEEEcCCEEEECCEEEEEEecCChhhC-c-ccccCCC
Confidence 4899999887449999975431 1111221 11223345666543343221 1 1112457
Q ss_pred EEEEECCChHHHHHHHHHHHhcCCC-eEEecCC
Q 024671 60 MIVVDYTVPAAVNGNAELYSKVGVP-FVMGTTG 91 (264)
Q Consensus 60 ~VvIDFS~p~~~~~~~~~~~~~g~p-lViGTTG 91 (264)
++++-|-.....+..+..++.|.+ +||...+
T Consensus 89 -iV~estG~~~s~e~a~~~l~aGakkvVIsaps 120 (331)
T 2g82_O 89 -VVIESTGVFTDADKAKAHLEGGAKKVIITAPA 120 (331)
T ss_dssp -EEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred -EEEECCCchhhHHHHHHHHHCCCCEEEECCCC
Confidence 789877777777888888888863 5555444
No 483
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=33.59 E-value=43 Score=29.22 Aligned_cols=23 Identities=13% Similarity=0.157 Sum_probs=14.6
Q ss_pred HHHHHHHHhcCCCeEEecCCCCHH
Q 024671 72 NGNAELYSKVGVPFVMGTTGGDRV 95 (264)
Q Consensus 72 ~~~~~~~~~~g~plViGTTG~~~~ 95 (264)
.+.++.+.+ ++|+++||.+.+.+
T Consensus 53 ~~v~~~~~~-rvpviaGvg~~~t~ 75 (283)
T 2pcq_A 53 ARGLRALRP-RKPFLVGLMEETLP 75 (283)
T ss_dssp HHHHHTCCC-SSCCEEEECCSSHH
T ss_pred HHHHHHHHh-CCcEEEeCCCCCHH
Confidence 455555555 77777777766543
No 484
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=33.51 E-value=83 Score=26.43 Aligned_cols=21 Identities=19% Similarity=0.088 Sum_probs=16.0
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCC
Q 024671 1 MGKAVIKAADAAGLELVPVSFGT 23 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~ 23 (264)
||+.+++.+.+ |+++. .+++.
T Consensus 12 ~G~~~a~~l~~-g~~V~-~~~~~ 32 (289)
T 2cvz_A 12 MGYPMAGHLAR-RFPTL-VWNRT 32 (289)
T ss_dssp THHHHHHHHHT-TSCEE-EECSS
T ss_pred HHHHHHHHHhC-CCeEE-EEeCC
Confidence 89999988888 99876 34543
No 485
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=33.43 E-value=1.5e+02 Score=24.41 Aligned_cols=73 Identities=14% Similarity=0.091 Sum_probs=44.6
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCC--CEEEEECCChHHHHHHHHHH
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYP--NMIVVDYTVPAAVNGNAELY 78 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~--d~VvIDFS~p~~~~~~~~~~ 78 (264)
+|+.+++.+.+.|.+++.. ++... .+++...++..... ..+..|++.++.+.+.++.+
T Consensus 26 iG~~la~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 85 (266)
T 1xq1_A 26 IGHAIVEEFAGFGAVIHTC-ARNEY-------------------ELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTV 85 (266)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCHH-------------------HHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHH
Confidence 3788888888888887753 32210 11111222211122 23567999999998888776
Q ss_pred Hh---cCCCeEEecCCCC
Q 024671 79 SK---VGVPFVMGTTGGD 93 (264)
Q Consensus 79 ~~---~g~plViGTTG~~ 93 (264)
.+ .++.+||-..|..
T Consensus 86 ~~~~~~~id~li~~Ag~~ 103 (266)
T 1xq1_A 86 SSMFGGKLDILINNLGAI 103 (266)
T ss_dssp HHHHTTCCSEEEEECCC-
T ss_pred HHHhCCCCcEEEECCCCC
Confidence 55 4688898888853
No 486
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=33.32 E-value=1.8e+02 Score=23.38 Aligned_cols=19 Identities=16% Similarity=0.303 Sum_probs=15.8
Q ss_pred ChHHHHHHHHhCCCeEEEE
Q 024671 1 MGKAVIKAADAAGLELVPV 19 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~ 19 (264)
+|+.+++.+.++|+++++.
T Consensus 33 iG~~l~~~L~~~G~~V~~~ 51 (236)
T 3e8x_A 33 VARYLLSELKNKGHEPVAM 51 (236)
T ss_dssp HHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhCCCeEEEE
Confidence 4899999988889998864
No 487
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=33.30 E-value=59 Score=30.20 Aligned_cols=52 Identities=15% Similarity=0.171 Sum_probs=31.0
Q ss_pred hhhhcCCCCEEEEECCC--hHHHHHHHHHHHhc-CCCeEEecCCCCHHHHHHHHHc
Q 024671 51 ASVFDKYPNMIVVDYTV--PAAVNGNAELYSKV-GVPFVMGTTGGDRVRLHETIEN 103 (264)
Q Consensus 51 ~~~~~~~~d~VvIDFS~--p~~~~~~~~~~~~~-g~plViGTTG~~~~~~~~l~~~ 103 (264)
+.+.+..+|.|+||.+. |+.+.+.++.+.+. ++|+++|+. .+.++.+.+.++
T Consensus 150 ~~lveaGvdvIvldta~G~~~~~~e~I~~ik~~~~i~Vi~g~V-~t~e~A~~a~~a 204 (400)
T 3ffs_A 150 KLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNV-VTEEATKELIEN 204 (400)
T ss_dssp HHHHHHTCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEEEEE-CSHHHHHHHHHT
T ss_pred HHHHHcCCCEEEEeCCCCCcccHHHHHHHHHhcCCCeEEEeec-CCHHHHHHHHHc
Confidence 33344567865666663 56667777777665 777777543 345555555443
No 488
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=33.28 E-value=1.6e+02 Score=26.64 Aligned_cols=81 Identities=20% Similarity=0.177 Sum_probs=46.9
Q ss_pred ChHHHHHHHH-hCCCeEEEEEcCC-C---------------cccc------ccccccCceeEeecCCchhhHHhhhhcCC
Q 024671 1 MGKAVIKAAD-AAGLELVPVSFGT-E---------------EESG------QKVEVCGKEIQVHGLSDRESVLASVFDKY 57 (264)
Q Consensus 1 MG~~i~~~~~-~~~~eLv~~~~~~-~---------------~~~g------~~~~~~~~~i~i~~~~dl~~~l~~~~~~~ 57 (264)
+||.+.+++. ..++++|+.-+.. + ...| ..+.+.+..|.+....|++.. ...+..
T Consensus 12 IGr~v~R~~~~~~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~v~~~~~~l~i~Gk~I~v~~e~dp~~i--~w~~~g 89 (332)
T 3pym_A 12 IGRLVMRIALSRPNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSHDDKHIIVDGKKIATYQERDPANL--PWGSSN 89 (332)
T ss_dssp HHHHHHHHHHHSTTCEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGGS--CTTTTT
T ss_pred HHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHhcccCCCCCCCCcEEEcCCEEEECCEEEEEEeecccccC--CccccC
Confidence 3889999887 4689999875531 1 0111 112234445677644444321 112335
Q ss_pred CCEEEEECCChHHHHHHHHHHHhcCCC
Q 024671 58 PNMIVVDYTVPAAVNGNAELYSKVGVP 84 (264)
Q Consensus 58 ~d~VvIDFS~p~~~~~~~~~~~~~g~p 84 (264)
.| ++++-|-.....+.....++.|..
T Consensus 90 vD-iVlesTG~f~s~e~a~~hl~aGAk 115 (332)
T 3pym_A 90 VD-IAIDSTGVFKELDTAQKHIDAGAK 115 (332)
T ss_dssp CS-EEEECSSSSCSHHHHHHHHHTTCS
T ss_pred cc-EEEEecccccCHHHHHHHHHcCCC
Confidence 78 789866666666666667777765
No 489
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=33.27 E-value=34 Score=30.38 Aligned_cols=33 Identities=18% Similarity=0.166 Sum_probs=18.8
Q ss_pred CCCEEEEECCC-hHHHHHHHHHHHhc-CCCeEEecC
Q 024671 57 YPNMIVVDYTV-PAAVNGNAELYSKV-GVPFVMGTT 90 (264)
Q Consensus 57 ~~d~VvIDFS~-p~~~~~~~~~~~~~-g~plViGTT 90 (264)
.+| ++||.+- ++.+...++.+... |.=+.+|..
T Consensus 260 g~D-~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~ 294 (373)
T 2fzw_A 260 GVD-YSFECIGNVKVMRAALEACHKGWGVSVVVGVA 294 (373)
T ss_dssp CBS-EEEECSCCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred CCC-EEEECCCcHHHHHHHHHhhccCCcEEEEEecC
Confidence 467 6777774 45555555555445 554555543
No 490
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=33.25 E-value=87 Score=26.20 Aligned_cols=71 Identities=21% Similarity=0.214 Sum_probs=45.9
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
+|+.+++.+.+.|.+++.. ++... .+++..... ......+..|.+.++.+...++.+.+
T Consensus 17 IG~~~a~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~ 75 (281)
T 3m1a_A 17 FGRAIAEAAVAAGDTVIGT-ARRTE-------------------ALDDLVAAY-PDRAEAISLDVTDGERIDVVAADVLA 75 (281)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSGG-------------------GGHHHHHHC-TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHhc-cCCceEEEeeCCCHHHHHHHHHHHHH
Confidence 4889999888889988754 32211 111111111 11222356799999999998887766
Q ss_pred c--CCCeEEecCCC
Q 024671 81 V--GVPFVMGTTGG 92 (264)
Q Consensus 81 ~--g~plViGTTG~ 92 (264)
. ++.+|+-..|.
T Consensus 76 ~~g~id~lv~~Ag~ 89 (281)
T 3m1a_A 76 RYGRVDVLVNNAGR 89 (281)
T ss_dssp HHSCCSEEEECCCC
T ss_pred hCCCCCEEEECCCc
Confidence 4 78899888885
No 491
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=33.24 E-value=57 Score=28.79 Aligned_cols=50 Identities=18% Similarity=0.204 Sum_probs=38.4
Q ss_pred EEEEECCChHHHHHHHHHHHhcCCCeEEecCCCCHHHHHHHHHccCCcEEEccc
Q 024671 60 MIVVDYTVPAAVNGNAELYSKVGVPFVMGTTGGDRVRLHETIENSNVYAVISPQ 113 (264)
Q Consensus 60 ~VvIDFS~p~~~~~~~~~~~~~g~plViGTTG~~~~~~~~l~~~~~~~~v~s~N 113 (264)
.+-||=+.|+++...+ +.|.++|=-.||+..+++-.++...+.|+|..++
T Consensus 92 piSIDT~~~~va~aAl----~aGa~iINdvsg~~d~~~~~~~a~~~~~vVlmh~ 141 (282)
T 1aj0_A 92 WISVDTSKPEVIRESA----KVGAHIINDIRSLSEPGALEAAAETGLPVCLMHM 141 (282)
T ss_dssp EEEEECCCHHHHHHHH----HTTCCEEEETTTTCSTTHHHHHHHHTCCEEEECC
T ss_pred eEEEeCCCHHHHHHHH----HcCCCEEEECCCCCCHHHHHHHHHhCCeEEEEcc
Confidence 4799999998766555 4599999999997555666677777888877654
No 492
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=33.18 E-value=1.7e+02 Score=24.70 Aligned_cols=19 Identities=16% Similarity=0.156 Sum_probs=15.7
Q ss_pred ChHHHHHHHHhCCCeEEEE
Q 024671 1 MGKAVIKAADAAGLELVPV 19 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~ 19 (264)
+|+.+++.+.+.|+++.+.
T Consensus 16 iG~~l~~~L~~~g~~V~~~ 34 (321)
T 3c1o_A 16 IGKFMVRASLSFSHPTFIY 34 (321)
T ss_dssp THHHHHHHHHHTTCCEEEE
T ss_pred hHHHHHHHHHhCCCcEEEE
Confidence 5899999988888888764
No 493
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=33.16 E-value=1.1e+02 Score=25.77 Aligned_cols=70 Identities=11% Similarity=0.051 Sum_probs=39.4
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCCh------------
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVP------------ 68 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p------------ 68 (264)
.|+.+++.+.+.|+++++. .+... .++...++++.+++. ..+| +||.+..+
T Consensus 15 iG~~l~~~L~~~g~~v~~~-~r~~~------------~D~~d~~~~~~~~~~---~~~d-~vih~a~~~~~~~~~~~~~~ 77 (321)
T 1e6u_A 15 VGSAIRRQLEQRGDVELVL-RTRDE------------LNLLDSRAVHDFFAS---ERID-QVYLAAAKVGGIVANNTYPA 77 (321)
T ss_dssp HHHHHHHHHTTCTTEEEEC-CCTTT------------CCTTCHHHHHHHHHH---HCCS-EEEECCCCCCCHHHHHHCHH
T ss_pred HHHHHHHHHHhCCCeEEEE-ecCcc------------CCccCHHHHHHHHHh---cCCC-EEEEcCeecCCcchhhhCHH
Confidence 3888998888889987753 32210 111111233333321 2588 78887642
Q ss_pred -------HHHHHHHHHHHhcCCCeEE
Q 024671 69 -------AAVNGNAELYSKVGVPFVM 87 (264)
Q Consensus 69 -------~~~~~~~~~~~~~g~plVi 87 (264)
..+...++.|.+.++.-+|
T Consensus 78 ~~~~~n~~~~~~l~~~~~~~~~~~~v 103 (321)
T 1e6u_A 78 DFIYQNMMIESNIIHAAHQNDVNKLL 103 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 2345667788888874333
No 494
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=33.15 E-value=2e+02 Score=23.57 Aligned_cols=71 Identities=15% Similarity=0.263 Sum_probs=46.3
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
+|+.+++...++|..++.. ++... .+++..+.+.. ....+..|.|.++.+.+.++.+.+
T Consensus 21 IG~a~a~~l~~~G~~V~~~-~r~~~-------------------~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~ 79 (248)
T 3op4_A 21 IGKAIAELLAERGAKVIGT-ATSES-------------------GAQAISDYLGD-NGKGMALNVTNPESIEAVLKAITD 79 (248)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESSHH-------------------HHHHHHHHHGG-GEEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-eCCHH-------------------HHHHHHHHhcc-cceEEEEeCCCHHHHHHHHHHHHH
Confidence 4889998888889887753 32210 11111121111 122357899999999999988876
Q ss_pred c--CCCeEEecCCC
Q 024671 81 V--GVPFVMGTTGG 92 (264)
Q Consensus 81 ~--g~plViGTTG~ 92 (264)
. ++.+++-..|.
T Consensus 80 ~~g~iD~lv~nAg~ 93 (248)
T 3op4_A 80 EFGGVDILVNNAGI 93 (248)
T ss_dssp HHCCCSEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 4 78899988885
No 495
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=33.13 E-value=1.2e+02 Score=25.39 Aligned_cols=73 Identities=11% Similarity=0.023 Sum_probs=45.4
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
+|+.+++.+.+.|..++.. ++.... .+++..+.+ ......+..|+|.++.+...++.+.+
T Consensus 21 IG~aia~~l~~~G~~V~~~-~r~~~~------------------~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (269)
T 2h7i_A 21 IAFHIARVAQEQGAQLVLT-GFDRLR------------------LIQRITDRL-PAKAPLLELDVQNEEHLASLAGRVTE 80 (269)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ECSCHH------------------HHHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHCCCEEEEE-ecChHH------------------HHHHHHHhc-CCCceEEEccCCCHHHHHHHHHHHHH
Confidence 4888998888888887743 322100 011111111 11233456799999999999988766
Q ss_pred c-----CCCeEEecCCCC
Q 024671 81 V-----GVPFVMGTTGGD 93 (264)
Q Consensus 81 ~-----g~plViGTTG~~ 93 (264)
. ++.+||-..|..
T Consensus 81 ~~g~~~~iD~lv~nAg~~ 98 (269)
T 2h7i_A 81 AIGAGNKLDGVVHSIGFM 98 (269)
T ss_dssp HHCTTCCEEEEEECCCCC
T ss_pred HhCCCCCceEEEECCccC
Confidence 4 678888777753
No 496
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=32.99 E-value=70 Score=29.08 Aligned_cols=50 Identities=16% Similarity=0.194 Sum_probs=29.6
Q ss_pred hhcCCCCEEEEECCC--hHHHHHHHHHHHhc-CCCeEEecCCCCHHHHHHHHHc
Q 024671 53 VFDKYPNMIVVDYTV--PAAVNGNAELYSKV-GVPFVMGTTGGDRVRLHETIEN 103 (264)
Q Consensus 53 ~~~~~~d~VvIDFS~--p~~~~~~~~~~~~~-g~plViGTTG~~~~~~~~l~~~ 103 (264)
+.+..+|.|+||+++ |+.+.+.++.+.+. ++|+++|+. .+.++.+.+.++
T Consensus 113 l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~~~~Vivg~v-~t~e~A~~l~~a 165 (361)
T 3khj_A 113 LVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNV-VTEEATKELIEN 165 (361)
T ss_dssp HHHTTCSEEEECCSCCSBHHHHHHHHHHHHHCCCEEEEEEE-CSHHHHHHHHHT
T ss_pred HHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhcCCcEEEccC-CCHHHHHHHHHc
Confidence 334567766677764 55566666665554 777777554 345555555443
No 497
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=32.99 E-value=70 Score=25.13 Aligned_cols=37 Identities=16% Similarity=0.124 Sum_probs=29.0
Q ss_pred ChHHHHHHHHHHHhcCCCeEEecCCC-CHHHHHHHHHc
Q 024671 67 VPAAVNGNAELYSKVGVPFVMGTTGG-DRVRLHETIEN 103 (264)
Q Consensus 67 ~p~~~~~~~~~~~~~g~plViGTTG~-~~~~~~~l~~~ 103 (264)
+|+.+.+.+++|.+.|+++.+=|.|+ +++.++.+.+.
T Consensus 17 ~~~~~~~l~~~~~~~g~~~~l~TNG~l~~~~~~~l~~~ 54 (182)
T 3can_A 17 HPEFLIDILKRCGQQGIHRAVDTTLLARKETVDEVMRN 54 (182)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEECTTCCCHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCcEEEECCCCCCHHHHHHHHhh
Confidence 45556789999999999999999997 45566667654
No 498
>3rxy_A NIF3 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, NIF3 superfamily, unknown function; 2.00A {Sphaerobacter thermophilus}
Probab=32.98 E-value=87 Score=27.79 Aligned_cols=73 Identities=14% Similarity=0.074 Sum_probs=52.9
Q ss_pred EEEECC-ChHHHHHHHHHHHhcCCCeEEecCCC-CHHHHHHHHHccCCcEEEccch---hHHHHHHHHHHHHHHHhcCCC
Q 024671 61 IVVDYT-VPAAVNGNAELYSKVGVPFVMGTTGG-DRVRLHETIENSNVYAVISPQM---GKQVVAFLAAMEIMAEQFPGA 135 (264)
Q Consensus 61 VvIDFS-~p~~~~~~~~~~~~~g~plViGTTG~-~~~~~~~l~~~~~~~~v~s~Nf---SlGv~ll~~~~~~aa~~l~~~ 135 (264)
|.||-+ --+.-.+.++.+.+.|+..+| ||- +.+.....++..++-++++.-+ ++|++.|++.++
T Consensus 198 IaV~~GgGtsG~~~~i~~a~~~GvDt~I--TGe~~~~~~~~~A~E~ginVI~AGHyATEt~Gv~aL~~~Le--------- 266 (278)
T 3rxy_A 198 IAVVHGAGTNGGYAVARAYFDHGVRTVL--YIHIAPEEAERLRREGGGNLIVTGHIASDLVGINRYVQALE--------- 266 (278)
T ss_dssp EEECCSSSSCCHHHHHHHHHHTTCCEEE--ESCCCHHHHHHHHHHCSSEEEECCHHHHHHHHHHHHHHHHH---------
T ss_pred EEEEcCCCCCCcHHHHHHHHHcCCCEEE--EecCchHHHHHHHHHcCCeEEEeccchHhHHHHHHHHHHHH---------
Confidence 577776 223456888899999999888 564 4555557777888999998776 589988887654
Q ss_pred CCCCCEEEEee
Q 024671 136 FSGYSLQVLES 146 (264)
Q Consensus 136 ~~~~dieI~E~ 146 (264)
.|.+|++..
T Consensus 267 --~~Glevi~~ 275 (278)
T 3rxy_A 267 --ERGVEVVRM 275 (278)
T ss_dssp --HTTCEEEEC
T ss_pred --HcCCeeecc
Confidence 247888754
No 499
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=32.93 E-value=1.7e+02 Score=23.69 Aligned_cols=73 Identities=14% Similarity=0.044 Sum_probs=45.7
Q ss_pred hHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCc-hhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 2 GKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSD-RESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 2 G~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~d-l~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
|+.+++.+.+.++++++.+|..+... .+ .++++.+..+ ++.. .+...+.++|=.-+|..-.+..+.+.+
T Consensus 24 g~~v~~~l~~~~~~~vgfiDd~~~~~----~~--~g~~Vlg~~~~~~~~----~~~~~~~v~iAIg~~~~R~~i~~~l~~ 93 (220)
T 4ea9_A 24 AKVVIESLRACGETVAAIVDADPTRR----AV--LGVPVVGDDLALPML----REQGLSRLFVAIGDNRLRQKLGRKARD 93 (220)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCC-------CB--TTBCEEESGGGHHHH----HHTTCCEEEECCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEEeCCcccC----cC--CCeeEECCHHHHHHh----hcccccEEEEecCCHHHHHHHHHHHHh
Confidence 78888888778899999888544211 11 2456665433 3322 222344467777778888888888888
Q ss_pred cCCC
Q 024671 81 VGVP 84 (264)
Q Consensus 81 ~g~p 84 (264)
.+..
T Consensus 94 ~g~~ 97 (220)
T 4ea9_A 94 HGFS 97 (220)
T ss_dssp TTCE
T ss_pred cCCC
Confidence 7754
No 500
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=32.93 E-value=1.2e+02 Score=24.35 Aligned_cols=70 Identities=11% Similarity=0.070 Sum_probs=45.1
Q ss_pred ChHHHHHHHHhCCCeEEEEEcCCCccccccccccCceeEeecCCchhhHHhhhhcCCCCEEEEECCChHHHHHHHHHHHh
Q 024671 1 MGKAVIKAADAAGLELVPVSFGTEEESGQKVEVCGKEIQVHGLSDRESVLASVFDKYPNMIVVDYTVPAAVNGNAELYSK 80 (264)
Q Consensus 1 MG~~i~~~~~~~~~eLv~~~~~~~~~~g~~~~~~~~~i~i~~~~dl~~~l~~~~~~~~d~VvIDFS~p~~~~~~~~~~~~ 80 (264)
+|+.+++.+.++|++++.. ++.. +.+++..+++. ....+..|++.++.+.+.++.+.+
T Consensus 17 iG~~~a~~l~~~G~~V~~~-~r~~-------------------~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~ 74 (234)
T 2ehd_A 17 IGEATARLLHAKGYRVGLM-ARDE-------------------KRLQALAAELE--GALPLPGDVREEGDWARAVAAMEE 74 (234)
T ss_dssp HHHHHHHHHHHTTCEEEEE-ESCH-------------------HHHHHHHHHST--TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEE-ECCH-------------------HHHHHHHHHhh--hceEEEecCCCHHHHHHHHHHHHH
Confidence 3888998888889887753 3221 11111112111 223356799999999988887765
Q ss_pred c--CCCeEEecCCC
Q 024671 81 V--GVPFVMGTTGG 92 (264)
Q Consensus 81 ~--g~plViGTTG~ 92 (264)
. ++.+||-..|.
T Consensus 75 ~~~~id~li~~Ag~ 88 (234)
T 2ehd_A 75 AFGELSALVNNAGV 88 (234)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 3 68889888875
Done!