BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>024672
MIAQSRSSSNFLPCLPPKPKAKVTRIRALSADAGHDRPPSSSEGKNPLTAVMDVPRNIWR
RTLRPLSDFGFGRRSVWEGGVGLFLVSGTVLLALSLAWLRGFQLRSKFRKYLAVFEFSQA
CGICTGTPVRIRGVTVGNVIRVNPSLKSIEAVVEVEDEKTVIPQNALVEVNQSGLLMETL
IDITPRDPIPTPTVGPLDPECVREGLIMCDRQKMKGHQGVSLDELVGIVTRLGREMEGIG
ITNSYLLAERVSSVIEEARPLLTK

High Scoring Gene Products

Symbol, full name Information P value
ABCI15
ATP-binding cassette I15 		protein from Arabidopsis thaliana 1.1e-92
PSPTO_4445
Mce-related protein 		protein from Pseudomonas syringae pv. tomato str. DC3000 0.00032
PSPPH_4143
Toluene tolerance protein Ttg2C, putative 		protein from Pseudomonas syringae pv. phaseolicola 1448A 0.00044

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  024672
        (264 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2092354 - symbol:ABCI15 "ATP-binding cassette ...   923  1.1e-92   1
UNIPROTKB|Q87WU8 - symbol:PSPTO_4445 "Mce-related protein...   104  0.00032   1
UNIPROTKB|Q48EC3 - symbol:PSPPH_4143 "Toluene tolerance p...   103  0.00044   1


>TAIR|locus:2092354 [details] [associations]
            symbol:ABCI15 "ATP-binding cassette I15" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
            [GO:0016020 "membrane" evidence=ISS;IDA] [GO:0009941 "chloroplast
            envelope" evidence=IDA] [GO:0005319 "lipid transporter activity"
            evidence=IMP] [GO:0005543 "phospholipid binding" evidence=IDA]
            [GO:0006869 "lipid transport" evidence=IMP] [GO:0009706
            "chloroplast inner membrane" evidence=IDA] [GO:0032365
            "intracellular lipid transport" evidence=IMP] [GO:0010207
            "photosystem II assembly" evidence=RCA] [GO:0009536 "plastid"
            evidence=IDA] Pfam:PF02470 GO:GO:0016021 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0005543 TCDB:3.A.1.27.2
            GO:GO:0009706 GO:GO:0005319 EMBL:AB024036 eggNOG:COG1463
            InterPro:IPR003399 EMBL:AY048230 EMBL:AY094020 EMBL:AY085722
            IPI:IPI00525132 IPI:IPI00526330 RefSeq:NP_566659.1
            RefSeq:NP_974345.1 UniGene:At.8172 STRING:Q9LTR2 PaxDb:Q9LTR2
            PRIDE:Q9LTR2 EnsemblPlants:AT3G20320.1 GeneID:821576
            KEGG:ath:AT3G20320 TAIR:At3g20320 HOGENOM:HOG000238696
            InParanoid:Q9LTR2 OMA:RRNIKLL PhylomeDB:Q9LTR2 ProtClustDB:PLN03094
            Genevestigator:Q9LTR2 GO:GO:0032365 Uniprot:Q9LTR2
        Length = 381

 Score = 923 (330.0 bits), Expect = 1.1e-92, P = 1.1e-92
 Identities = 183/265 (69%), Positives = 211/265 (79%)

Query:     1 MIAQSRSSSNFLPCLPPKPKAKVTRIRALS-ADAGHDRPPSSSEGKNPLTAVMDVPRNIW 59
             MIA  R S N +P LPPKP+ +   +RA S +DA H +P SS  GKNPLT V+DVPRNIW
Sbjct:    19 MIACPRVSPNGVPYLPPKPRTRHLVVRAASNSDAAHGQP-SSDGGKNPLTVVLDVPRNIW 77

Query:    60 RRTLRPLSDFGFGRRSVWEGGVGLFLVSGTVLLALSLAWLRGFQLRSKFRKYLAVFEFSQ 119
             R+TL+PLSDFGFG+RS+WEGGVGLF+VSG  LLALS AWLRGFQ+RSKFRKY  VFE S 
Sbjct:    78 RQTLKPLSDFGFGKRSIWEGGVGLFIVSGATLLALSWAWLRGFQMRSKFRKYQTVFELSH 137

Query:   120 ACGICTGTPVRIRGVTVGNVIRVNPSLKSIEAVVEVEDEKTVIPQNALVEVNQSGLLMEX 179
             A GICTGTPVRIRGVTVG +IRVNPSLK+IEAV E+ED+K +IP+N+LVEVNQSGLLME 
Sbjct:   138 ASGICTGTPVRIRGVTVGTIIRVNPSLKNIEAVAEIEDDKIIIPRNSLVEVNQSGLLMET 197

Query:   180 XXXXXXXXXXXXXXVGPLDPECVREGLIMCDRQKMKGHQGVSLDELVGIVTRLGREMEGI 239
                           VGPL PEC +EGLI+CDRQ +KG QGVSLDELVGI TR+GRE+E I
Sbjct:   198 MIDIMPRNPIPEPSVGPLHPECGKEGLIVCDRQTIKGVQGVSLDELVGIFTRIGREVEAI 257

Query:   240 GITNSYLLAERVSSVIEEARPLLTK 264
             G+ N+Y LAER +SVIEEARPLL K
Sbjct:   258 GVANTYSLAERAASVIEEARPLLKK 282


>UNIPROTKB|Q87WU8 [details] [associations]
            symbol:PSPTO_4445 "Mce-related protein" species:223283
            "Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF02470 EMBL:AE016853 GenomeReviews:AE016853_GR
            eggNOG:COG1463 HOGENOM:HOG000255143 KO:K02067 InterPro:IPR003399
            OMA:EQYIGLE ProtClustDB:CLSK868664 RefSeq:NP_794199.1 DNASU:1186126
            GeneID:1186126 KEGG:pst:PSPTO_4445 PATRIC:20000400
            BioCyc:PSYR223283:GJIX-4511-MONOMER Uniprot:Q87WU8
        Length = 155

 Score = 104 (41.7 bits), Expect = 0.00032, P = 0.00032
 Identities = 30/103 (29%), Positives = 47/103 (45%)

Query:    78 EGGVGLFLVSGTVLLALSLAWLRGFQLRSKFRKYLAVFEFSQACGICTGTPVRIRGVTVG 137
             E GVGLFL++G + L L    + G    +    Y     F    G+     V + GVTVG
Sbjct:     7 ETGVGLFLLAGILALLLLALRVSGLSTSASTDTYKLYAYFDNIAGLTVRAKVSMAGVTVG 66

Query:   138 NVIRVNPSLKSIEAVVEVEDEKTV--IPQNALVEVNQSGLLME 178
              V  ++    +    V +E +K V  +P ++   +  +GLL E
Sbjct:    67 KVTAIDLDRDTFTGRVTLEIQKKVDNLPSDSTASILTAGLLGE 109


>UNIPROTKB|Q48EC3 [details] [associations]
            symbol:PSPPH_4143 "Toluene tolerance protein Ttg2C,
            putative" species:264730 "Pseudomonas syringae pv. phaseolicola
            1448A" [GO:0005215 "transporter activity" evidence=ISS] [GO:0006810
            "transport" evidence=ISS] [GO:0009636 "response to toxic substance"
            evidence=ISS] Pfam:PF02470 GO:GO:0009636 GO:GO:0005215
            EMBL:CP000058 GenomeReviews:CP000058_GR eggNOG:COG1463
            HOGENOM:HOG000255143 KO:K02067 InterPro:IPR003399 OMA:EQYIGLE
            RefSeq:YP_276265.1 STRING:Q48EC3 GeneID:3558083 KEGG:psp:PSPPH_4143
            PATRIC:19977757 ProtClustDB:CLSK868664 Uniprot:Q48EC3
        Length = 155

 Score = 103 (41.3 bits), Expect = 0.00044, P = 0.00044
 Identities = 29/103 (28%), Positives = 47/103 (45%)

Query:    78 EGGVGLFLVSGTVLLALSLAWLRGFQLRSKFRKYLAVFEFSQACGICTGTPVRIRGVTVG 137
             E GVGLFL++G + L L    + G    +    Y     F    G+     V + GVT+G
Sbjct:     7 ETGVGLFLLAGILALLLLALRVSGLSTSASTDTYKLYAYFDNIAGLTVRAKVSMAGVTIG 66

Query:   138 NVIRVNPSLKSIEAVVEVEDEKTV--IPQNALVEVNQSGLLME 178
              V  ++    +    V +E +K V  +P ++   +  +GLL E
Sbjct:    67 KVTAIDLDRDTFTGRVTLEIQKKVDNLPSDSTASILTAGLLGE 109


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.137   0.403    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      264       249   0.00080  114 3  11 22  0.43    33
                                                     32  0.46    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  602 (64 KB)
  Total size of DFA:  173 KB (2101 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.33u 0.11s 19.44t   Elapsed:  00:00:01
  Total cpu time:  19.33u 0.11s 19.44t   Elapsed:  00:00:01
  Start:  Mon May 20 17:03:16 2013   End:  Mon May 20 17:03:17 2013

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