Query 024676
Match_columns 264
No_of_seqs 136 out of 1403
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 12:28:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/024676.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/024676hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 5.2E-45 1.8E-49 300.5 35.5 254 6-263 3-263 (304)
2 1vyh_C Platelet-activating fac 100.0 8.2E-42 2.8E-46 292.7 34.7 247 10-262 102-372 (410)
3 4gqb_B Methylosome protein 50; 100.0 1.3E-41 4.5E-46 285.0 33.8 244 13-260 79-332 (344)
4 3frx_A Guanine nucleotide-bind 100.0 3.7E-41 1.3E-45 279.3 35.6 245 10-260 59-318 (319)
5 4ery_A WD repeat-containing pr 100.0 1.7E-40 5.7E-45 273.9 38.8 250 9-263 16-272 (312)
6 1vyh_C Platelet-activating fac 100.0 5E-41 1.7E-45 287.8 34.9 244 9-257 143-409 (410)
7 3ow8_A WD repeat-containing pr 100.0 1.4E-40 4.9E-45 276.1 33.2 249 12-263 28-283 (321)
8 3iz6_a 40S ribosomal protein R 100.0 1.7E-40 5.9E-45 281.7 34.0 250 9-263 59-379 (380)
9 3ow8_A WD repeat-containing pr 100.0 4.2E-40 1.4E-44 273.3 34.4 243 9-257 73-319 (321)
10 3frx_A Guanine nucleotide-bind 100.0 1.1E-39 3.9E-44 270.4 35.9 249 7-261 8-269 (319)
11 2ynn_A Coatomer subunit beta'; 100.0 9.2E-40 3.2E-44 269.1 34.4 246 10-259 49-302 (304)
12 1got_B GT-beta; complex (GTP-b 100.0 1.5E-39 5E-44 271.9 36.1 248 9-263 48-305 (340)
13 2pbi_B Guanine nucleotide-bind 100.0 3.6E-39 1.2E-43 271.2 37.6 250 9-263 57-319 (354)
14 2xzm_R RACK1; ribosome, transl 100.0 1.2E-39 4E-44 272.8 33.1 245 10-261 70-342 (343)
15 4g56_B MGC81050 protein; prote 100.0 8.6E-40 2.9E-44 275.3 32.4 244 12-259 90-343 (357)
16 2pm7_B Protein transport prote 100.0 1.9E-39 6.6E-44 266.3 32.1 245 10-258 3-284 (297)
17 4aow_A Guanine nucleotide-bind 100.0 1E-38 3.5E-43 265.2 35.4 247 11-262 33-340 (340)
18 4gqb_B Methylosome protein 50; 100.0 1.6E-39 5.4E-44 272.3 29.1 245 13-263 27-293 (344)
19 1got_B GT-beta; complex (GTP-b 100.0 1.9E-38 6.6E-43 265.2 35.1 241 9-256 90-340 (340)
20 2xzm_R RACK1; ribosome, transl 100.0 2.1E-38 7.2E-43 265.2 35.2 252 7-262 12-288 (343)
21 2hes_X YDR267CP; beta-propelle 100.0 9.3E-39 3.2E-43 266.1 32.4 243 14-259 56-328 (330)
22 1erj_A Transcriptional repress 100.0 3.2E-38 1.1E-42 268.8 35.1 244 13-263 61-345 (393)
23 4g56_B MGC81050 protein; prote 100.0 1.5E-39 5.2E-44 273.8 25.7 246 13-263 39-305 (357)
24 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.7E-38 1.3E-42 264.0 33.1 206 6-215 5-223 (345)
25 1erj_A Transcriptional repress 100.0 7.3E-38 2.5E-42 266.6 34.4 241 17-261 124-391 (393)
26 1nr0_A Actin interacting prote 100.0 4.2E-38 1.5E-42 282.4 33.4 248 9-261 183-569 (611)
27 3dm0_A Maltose-binding peripla 100.0 6E-38 2.1E-42 285.2 34.6 244 10-259 424-693 (694)
28 2hes_X YDR267CP; beta-propelle 100.0 1.3E-37 4.4E-42 259.2 33.2 248 6-261 4-282 (330)
29 3bg1_A Protein SEC13 homolog; 100.0 1.1E-38 3.8E-43 264.1 24.3 244 11-258 8-292 (316)
30 2pbi_B Guanine nucleotide-bind 100.0 6.9E-37 2.4E-41 257.2 35.1 241 10-256 100-354 (354)
31 3dm0_A Maltose-binding peripla 100.0 2.6E-37 8.8E-42 281.0 34.3 248 11-263 377-636 (694)
32 4ery_A WD repeat-containing pr 100.0 1.5E-36 5.2E-41 250.2 35.7 244 10-258 59-311 (312)
33 3dw8_B Serine/threonine-protei 100.0 2.1E-38 7.1E-43 273.0 25.4 245 14-263 26-377 (447)
34 3zwl_B Eukaryotic translation 100.0 3.5E-36 1.2E-40 252.0 37.5 253 6-263 22-308 (369)
35 1sq9_A Antiviral protein SKI8; 100.0 4.6E-37 1.6E-41 260.7 30.8 255 1-263 1-326 (397)
36 1nr0_A Actin interacting prote 100.0 7.7E-37 2.6E-41 274.3 33.3 243 13-263 15-274 (611)
37 3f3f_A Nucleoporin SEH1; struc 100.0 4.2E-36 1.4E-40 248.9 34.2 249 11-263 6-341 (351)
38 3jrp_A Fusion protein of prote 100.0 5.7E-37 2E-41 257.9 28.7 248 9-260 4-288 (379)
39 3ei3_B DNA damage-binding prot 100.0 1.7E-36 5.8E-41 256.7 30.8 248 8-263 65-343 (383)
40 4aez_A CDC20, WD repeat-contai 100.0 1.8E-35 6E-40 252.4 36.1 243 14-263 132-384 (401)
41 3mkq_A Coatomer beta'-subunit; 100.0 3.9E-36 1.3E-40 276.9 34.2 254 6-263 3-263 (814)
42 1gxr_A ESG1, transducin-like e 100.0 2.2E-35 7.4E-40 244.4 35.1 249 8-263 43-300 (337)
43 4gga_A P55CDC, cell division c 100.0 4.2E-35 1.4E-39 251.6 37.7 246 10-261 141-397 (420)
44 3dwl_C Actin-related protein 2 100.0 1.3E-37 4.4E-42 262.7 21.3 247 6-258 1-280 (377)
45 4e54_B DNA damage-binding prot 100.0 9.4E-37 3.2E-41 263.0 26.8 248 11-263 114-391 (435)
46 2pm9_A Protein WEB1, protein t 100.0 1.5E-36 5.1E-41 258.9 25.6 251 9-262 60-340 (416)
47 4a11_B DNA excision repair pro 100.0 9.1E-35 3.1E-39 246.7 35.3 251 9-263 36-369 (408)
48 1k8k_C P40, ARP2/3 complex 41 100.0 1.6E-35 5.4E-40 248.9 29.6 244 10-259 2-274 (372)
49 1k8k_C P40, ARP2/3 complex 41 100.0 7.5E-36 2.6E-40 250.8 27.1 252 8-263 44-365 (372)
50 3i2n_A WD repeat-containing pr 100.0 2.2E-35 7.5E-40 246.5 29.0 247 11-261 13-293 (357)
51 1gxr_A ESG1, transducin-like e 100.0 2E-34 6.7E-39 238.7 34.3 237 14-257 95-335 (337)
52 3k26_A Polycomb protein EED; W 100.0 7E-36 2.4E-40 250.1 24.7 241 15-259 68-366 (366)
53 3v7d_B Cell division control p 100.0 2.8E-34 9.5E-39 248.9 35.4 243 8-262 113-384 (464)
54 3gre_A Serine/threonine-protei 100.0 1.4E-35 5E-40 255.1 27.1 244 13-262 60-362 (437)
55 2ymu_A WD-40 repeat protein; u 100.0 1.5E-34 5E-39 256.8 34.3 236 10-256 338-577 (577)
56 3vl1_A 26S proteasome regulato 100.0 8.2E-35 2.8E-39 248.8 31.5 238 19-260 100-366 (420)
57 3odt_A Protein DOA1; ubiquitin 100.0 9.7E-35 3.3E-39 238.3 30.7 244 7-263 9-259 (313)
58 2j04_B YDR362CP, TAU91; beta p 100.0 1.7E-36 5.8E-41 266.6 21.4 244 14-259 131-428 (524)
59 3i2n_A WD repeat-containing pr 100.0 2.8E-35 9.7E-40 245.8 27.0 248 12-263 61-357 (357)
60 3vl1_A 26S proteasome regulato 100.0 2.8E-35 9.6E-40 251.7 27.6 244 11-259 134-419 (420)
61 3ei3_B DNA damage-binding prot 100.0 1E-34 3.6E-39 245.6 30.3 240 13-259 115-382 (383)
62 1yfq_A Cell cycle arrest prote 100.0 3.3E-35 1.1E-39 244.4 26.6 242 12-263 7-286 (342)
63 4ggc_A P55CDC, cell division c 100.0 1.9E-33 6.6E-38 231.2 36.9 249 8-262 59-318 (318)
64 1sq9_A Antiviral protein SKI8; 100.0 4.4E-35 1.5E-39 248.5 27.3 250 8-261 54-397 (397)
65 1r5m_A SIR4-interacting protei 100.0 9.7E-34 3.3E-38 241.4 35.3 236 15-258 107-424 (425)
66 3mmy_A MRNA export factor; mRN 100.0 9.5E-35 3.2E-39 243.2 28.6 248 9-257 32-344 (368)
67 1r5m_A SIR4-interacting protei 100.0 7.3E-34 2.5E-38 242.2 33.9 246 10-261 39-363 (425)
68 2pm9_A Protein WEB1, protein t 100.0 1.3E-35 4.6E-40 253.0 23.0 250 8-261 105-416 (416)
69 2xyi_A Probable histone-bindin 100.0 3.4E-34 1.2E-38 246.7 31.4 248 10-259 122-410 (430)
70 3jro_A Fusion protein of prote 100.0 3.9E-35 1.3E-39 268.9 26.1 248 10-261 3-287 (753)
71 3odt_A Protein DOA1; ubiquitin 100.0 1.9E-33 6.6E-38 230.6 33.5 242 9-263 52-300 (313)
72 3k26_A Polycomb protein EED; W 100.0 7.3E-35 2.5E-39 243.9 25.3 249 11-262 13-321 (366)
73 3zwl_B Eukaryotic translation 100.0 1.6E-33 5.6E-38 235.7 33.4 247 9-261 67-348 (369)
74 2ymu_A WD-40 repeat protein; u 100.0 3.6E-33 1.2E-37 247.9 36.4 242 10-263 297-542 (577)
75 2aq5_A Coronin-1A; WD40 repeat 100.0 3E-34 1E-38 244.6 28.0 246 10-261 75-344 (402)
76 3dwl_C Actin-related protein 2 100.0 1.6E-35 5.4E-40 249.9 19.6 204 8-216 47-280 (377)
77 3v7d_B Cell division control p 100.0 3.9E-33 1.3E-37 241.7 35.1 244 9-263 155-425 (464)
78 4e54_B DNA damage-binding prot 100.0 2.2E-34 7.4E-39 248.2 25.8 248 11-263 159-434 (435)
79 2j04_B YDR362CP, TAU91; beta p 100.0 4.7E-34 1.6E-38 251.1 27.0 246 11-258 202-516 (524)
80 1pgu_A Actin interacting prote 100.0 2.6E-33 8.9E-38 250.0 31.1 242 13-263 15-287 (615)
81 2oaj_A Protein SNI1; WD40 repe 100.0 1.9E-33 6.6E-38 261.8 31.3 240 12-257 13-310 (902)
82 3sfz_A APAF-1, apoptotic pepti 100.0 5.8E-33 2E-37 266.5 34.7 248 10-263 609-875 (1249)
83 4aez_A CDC20, WD repeat-contai 100.0 1.4E-32 4.6E-37 234.5 32.2 240 14-262 89-339 (401)
84 4h5i_A Guanine nucleotide-exch 100.0 1.4E-33 4.9E-38 238.0 25.0 241 11-259 68-343 (365)
85 3gre_A Serine/threonine-protei 100.0 1.6E-33 5.5E-38 242.3 25.7 241 12-256 107-437 (437)
86 2aq5_A Coronin-1A; WD40 repeat 100.0 3.2E-33 1.1E-37 238.3 27.3 238 18-261 36-301 (402)
87 3iz6_a 40S ribosomal protein R 100.0 7E-34 2.4E-38 241.0 22.9 221 42-263 47-284 (380)
88 2pm7_B Protein transport prote 100.0 1.1E-32 3.6E-37 226.2 28.3 207 9-216 46-284 (297)
89 1p22_A F-BOX/WD-repeat protein 100.0 4.2E-32 1.4E-36 233.8 33.0 233 13-261 130-367 (435)
90 3lrv_A PRE-mRNA-splicing facto 100.0 2.4E-33 8.2E-38 234.4 22.8 226 29-261 46-294 (343)
91 1pgu_A Actin interacting prote 100.0 4.3E-32 1.5E-36 242.1 32.0 250 7-263 54-332 (615)
92 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.6E-31 5.5E-36 230.7 33.4 241 6-263 108-352 (445)
93 3mkq_A Coatomer beta'-subunit; 100.0 6.9E-32 2.4E-36 248.6 32.5 249 9-260 48-303 (814)
94 1l0q_A Surface layer protein; 100.0 6.9E-31 2.3E-35 222.5 36.0 245 12-263 28-279 (391)
95 3dw8_B Serine/threonine-protei 100.0 3.6E-32 1.2E-36 234.0 28.5 242 8-257 73-444 (447)
96 1p22_A F-BOX/WD-repeat protein 100.0 9.9E-32 3.4E-36 231.5 30.2 237 8-262 165-417 (435)
97 2ovr_B FBW7, F-BOX/WD repeat p 100.0 5.9E-31 2E-35 227.1 34.2 237 10-263 153-395 (445)
98 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.7E-31 1.6E-35 228.3 32.6 239 16-260 4-342 (450)
99 1yfq_A Cell cycle arrest prote 100.0 1.7E-31 5.9E-36 221.9 27.4 233 9-251 49-315 (342)
100 4gga_A P55CDC, cell division c 100.0 2.2E-30 7.5E-35 222.2 34.8 236 19-263 108-357 (420)
101 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.8E-31 1.3E-35 228.9 30.2 240 13-258 99-390 (450)
102 2oaj_A Protein SNI1; WD40 repe 100.0 2E-32 7E-37 255.0 23.8 247 12-263 431-787 (902)
103 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.8E-31 6.2E-36 223.3 26.5 248 12-263 57-339 (345)
104 3vu4_A KMHSV2; beta-propeller 100.0 1.3E-30 4.3E-35 219.1 30.5 234 12-261 15-273 (355)
105 3bg1_A Protein SEC13 homolog; 100.0 6E-32 2E-36 223.6 21.6 206 10-216 51-292 (316)
106 4gq1_A NUP37; propeller, trans 100.0 9.5E-32 3.2E-36 229.0 22.6 227 29-257 99-387 (393)
107 3bws_A Protein LP49; two-domai 100.0 4.5E-30 1.6E-34 220.3 33.0 240 13-258 166-431 (433)
108 3sfz_A APAF-1, apoptotic pepti 100.0 9.1E-31 3.1E-35 251.3 30.4 245 9-259 650-913 (1249)
109 2j04_A TAU60, YPL007P, hypothe 100.0 5.2E-31 1.8E-35 229.0 25.8 232 15-258 14-296 (588)
110 4ggc_A P55CDC, cell division c 100.0 2.2E-29 7.6E-34 206.9 33.9 236 19-263 28-277 (318)
111 4aow_A Guanine nucleotide-bind 100.0 3E-30 1E-34 214.1 27.9 212 49-262 26-289 (340)
112 4h5i_A Guanine nucleotide-exch 100.0 1.4E-30 4.6E-35 219.8 24.8 198 14-217 131-343 (365)
113 1l0q_A Surface layer protein; 100.0 9E-29 3.1E-33 209.5 34.1 229 31-263 2-237 (391)
114 3jrp_A Fusion protein of prote 100.0 1.5E-29 5E-34 212.6 28.0 209 8-217 47-287 (379)
115 4a11_B DNA excision repair pro 100.0 3.9E-29 1.3E-33 212.0 29.1 242 14-261 97-407 (408)
116 3bws_A Protein LP49; two-domai 100.0 1.7E-28 5.9E-33 210.5 32.7 241 17-263 123-394 (433)
117 2w18_A PALB2, fancn, partner a 100.0 1E-29 3.4E-34 208.7 23.6 174 39-215 155-355 (356)
118 3f3f_A Nucleoporin SEH1; struc 100.0 2.8E-29 9.7E-34 207.8 26.2 216 8-224 49-344 (351)
119 3lrv_A PRE-mRNA-splicing facto 100.0 1.4E-29 4.8E-34 211.5 24.5 231 16-257 76-331 (343)
120 2xyi_A Probable histone-bindin 100.0 9.5E-29 3.3E-33 212.7 29.4 210 6-218 171-411 (430)
121 4gq1_A NUP37; propeller, trans 100.0 2.9E-30 9.8E-35 219.8 19.7 206 12-218 132-390 (393)
122 2j04_A TAU60, YPL007P, hypothe 100.0 5.9E-30 2E-34 222.4 17.8 190 14-216 83-296 (588)
123 2w18_A PALB2, fancn, partner a 100.0 4.7E-28 1.6E-32 198.8 27.4 234 19-257 42-355 (356)
124 3mmy_A MRNA export factor; mRN 100.0 5.7E-28 2E-32 201.9 28.2 214 47-263 25-308 (368)
125 3vu4_A KMHSV2; beta-propeller 100.0 1.2E-27 4.2E-32 200.9 30.2 234 15-261 57-338 (355)
126 3jro_A Fusion protein of prote 100.0 2E-28 6.7E-33 224.6 22.2 210 7-217 44-285 (753)
127 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.2E-25 4.2E-30 192.6 28.1 247 10-261 111-389 (415)
128 1nir_A Nitrite reductase; hemo 100.0 3E-25 1E-29 196.2 30.7 229 29-259 147-402 (543)
129 3u4y_A Uncharacterized protein 99.9 4.4E-24 1.5E-28 176.7 30.3 243 14-261 38-306 (331)
130 1ri6_A Putative isomerase YBHE 99.9 2.2E-23 7.6E-28 172.7 28.6 244 13-261 34-312 (343)
131 1nir_A Nitrite reductase; hemo 99.9 3.2E-23 1.1E-27 183.3 30.5 238 19-262 181-461 (543)
132 1pby_B Quinohemoprotein amine 99.9 3.3E-23 1.1E-27 171.2 28.8 225 32-263 2-314 (337)
133 1jmx_B Amine dehydrogenase; ox 99.9 2.9E-23 1E-27 172.5 27.3 229 29-263 9-329 (349)
134 2hqs_A Protein TOLB; TOLB, PAL 99.9 7.6E-23 2.6E-27 175.2 30.6 222 9-238 171-408 (415)
135 3u4y_A Uncharacterized protein 99.9 3.1E-22 1.1E-26 165.5 29.7 229 30-262 9-255 (331)
136 2ojh_A Uncharacterized protein 99.9 6.7E-23 2.3E-27 165.8 24.8 235 10-250 35-293 (297)
137 3vgz_A Uncharacterized protein 99.9 1.5E-21 5.1E-26 162.5 30.7 242 15-263 39-307 (353)
138 3hfq_A Uncharacterized protein 99.9 1.1E-21 3.6E-26 163.7 27.9 244 14-262 37-322 (347)
139 2ojh_A Uncharacterized protein 99.9 4.1E-22 1.4E-26 161.2 22.6 224 35-262 16-261 (297)
140 2ecf_A Dipeptidyl peptidase IV 99.9 2.2E-22 7.5E-27 183.8 22.8 235 16-258 36-366 (741)
141 3vgz_A Uncharacterized protein 99.9 7.1E-21 2.4E-25 158.4 29.0 227 17-248 89-334 (353)
142 2ecf_A Dipeptidyl peptidase IV 99.9 9E-22 3.1E-26 179.8 21.6 234 18-259 110-413 (741)
143 1xfd_A DIP, dipeptidyl aminope 99.9 9.8E-22 3.4E-26 179.0 20.4 237 18-261 18-347 (723)
144 2oit_A Nucleoporin 214KDA; NH2 99.9 1.5E-21 5E-26 168.1 19.5 197 15-218 35-279 (434)
145 3scy_A Hypothetical bacterial 99.9 7.7E-19 2.6E-23 147.1 33.4 242 15-262 48-342 (361)
146 2oit_A Nucleoporin 214KDA; NH2 99.9 4.9E-21 1.7E-25 164.9 19.7 162 13-178 89-279 (434)
147 1ri6_A Putative isomerase YBHE 99.9 5.9E-20 2E-24 152.0 25.6 225 33-258 7-261 (343)
148 2z3z_A Dipeptidyl aminopeptida 99.9 1.6E-20 5.5E-25 170.7 24.1 243 12-261 116-437 (706)
149 3o4h_A Acylamino-acid-releasin 99.9 5.9E-21 2E-25 170.0 19.1 235 15-263 20-278 (582)
150 1jof_A Carboxy-CIS,CIS-muconat 99.9 2.2E-19 7.4E-24 151.1 26.6 241 15-260 38-342 (365)
151 2z3z_A Dipeptidyl aminopeptida 99.9 1.9E-20 6.6E-25 170.2 20.7 237 17-261 82-393 (706)
152 1xfd_A DIP, dipeptidyl aminope 99.9 5.8E-20 2E-24 167.3 20.6 243 11-259 52-393 (723)
153 1z68_A Fibroblast activation p 99.8 2.9E-20 9.8E-25 169.4 18.2 235 21-261 20-348 (719)
154 1q7f_A NHL, brain tumor CG1071 99.8 1.1E-17 3.6E-22 135.7 31.1 239 14-264 27-285 (286)
155 1pby_B Quinohemoprotein amine 99.8 8.7E-19 3E-23 144.6 24.1 203 18-228 35-321 (337)
156 1k32_A Tricorn protease; prote 99.8 2.1E-18 7.1E-23 163.4 26.0 237 12-261 332-639 (1045)
157 1k32_A Tricorn protease; prote 99.8 4.4E-19 1.5E-23 168.0 21.2 230 18-259 246-502 (1045)
158 4a5s_A Dipeptidyl peptidase 4 99.8 8.4E-19 2.9E-23 160.5 21.9 239 17-262 17-356 (740)
159 1jmx_B Amine dehydrogenase; ox 99.8 2.7E-18 9.2E-23 142.4 22.0 201 18-227 44-335 (349)
160 3pe7_A Oligogalacturonate lyas 99.8 7E-18 2.4E-22 142.3 23.8 246 11-262 25-332 (388)
161 3hfq_A Uncharacterized protein 99.8 1.7E-17 5.9E-22 138.1 25.7 206 13-221 82-323 (347)
162 3fvz_A Peptidyl-glycine alpha- 99.8 9E-17 3.1E-21 133.2 29.3 237 15-258 22-321 (329)
163 3pe7_A Oligogalacturonate lyas 99.8 4.4E-17 1.5E-21 137.4 24.4 240 13-258 77-381 (388)
164 3o4h_A Acylamino-acid-releasin 99.8 1.6E-17 5.3E-22 148.0 20.5 226 14-258 61-314 (582)
165 3scy_A Hypothetical bacterial 99.8 8.5E-16 2.9E-20 128.6 28.4 226 30-258 12-290 (361)
166 3e5z_A Putative gluconolactona 99.8 1.5E-15 5.2E-20 123.7 28.8 239 11-261 22-288 (296)
167 2oiz_A Aromatic amine dehydrog 99.8 2.6E-16 9E-21 132.2 23.1 228 29-263 13-340 (361)
168 3azo_A Aminopeptidase; POP fam 99.8 1.5E-16 5.2E-21 143.5 21.8 238 21-262 81-372 (662)
169 3azo_A Aminopeptidase; POP fam 99.7 3.5E-16 1.2E-20 141.1 23.5 243 12-261 19-327 (662)
170 2dg1_A DRP35, lactonase; beta 99.7 3.8E-14 1.3E-18 117.1 33.8 231 12-249 40-300 (333)
171 3c5m_A Oligogalacturonate lyas 99.7 9E-17 3.1E-21 135.5 18.2 237 19-262 38-332 (396)
172 2xdw_A Prolyl endopeptidase; a 99.7 2.3E-15 7.8E-20 137.1 28.2 243 14-261 122-416 (710)
173 3dsm_A Uncharacterized protein 99.7 1.6E-15 5.3E-20 125.8 24.5 233 19-263 46-305 (328)
174 1z68_A Fibroblast activation p 99.7 8.4E-18 2.9E-22 153.2 11.8 232 18-259 61-391 (719)
175 2oiz_A Aromatic amine dehydrog 99.7 1.6E-15 5.3E-20 127.5 23.0 218 14-238 49-358 (361)
176 3c5m_A Oligogalacturonate lyas 99.7 1.2E-15 4E-20 128.7 21.1 234 21-262 85-387 (396)
177 2dg1_A DRP35, lactonase; beta 99.7 5.1E-15 1.7E-19 122.4 24.5 237 17-262 6-265 (333)
178 1jof_A Carboxy-CIS,CIS-muconat 99.7 3.8E-15 1.3E-19 125.1 23.7 226 33-261 4-294 (365)
179 3no2_A Uncharacterized protein 99.7 1.6E-14 5.4E-19 116.8 25.8 210 30-246 4-230 (276)
180 1qks_A Cytochrome CD1 nitrite 99.7 9.5E-14 3.2E-18 122.9 32.3 229 30-259 166-421 (567)
181 3dsm_A Uncharacterized protein 99.7 9.3E-15 3.2E-19 121.1 23.9 218 39-262 15-256 (328)
182 1q7f_A NHL, brain tumor CG1071 99.7 2.6E-14 9E-19 115.6 25.0 197 14-218 74-281 (286)
183 2bkl_A Prolyl endopeptidase; m 99.7 7E-15 2.4E-19 133.6 22.9 238 14-262 118-400 (695)
184 4a5s_A Dipeptidyl peptidase 4 99.7 4.5E-15 1.5E-19 135.8 20.5 205 11-220 51-356 (740)
185 2gop_A Trilobed protease; beta 99.7 1.8E-14 6.1E-19 119.6 22.3 222 18-258 60-330 (347)
186 1rwi_B Serine/threonine-protei 99.7 8E-14 2.7E-18 111.6 24.9 237 18-262 25-267 (270)
187 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 5.2E-13 1.8E-17 109.1 29.0 238 13-259 14-299 (314)
188 3fvz_A Peptidyl-glycine alpha- 99.6 5.8E-13 2E-17 110.2 28.6 202 61-263 23-281 (329)
189 2mad_H Methylamine dehydrogena 99.6 1.1E-12 3.9E-17 110.4 30.4 227 29-263 30-354 (373)
190 3no2_A Uncharacterized protein 99.6 1.2E-13 4E-18 111.7 21.7 187 71-263 3-199 (276)
191 2gop_A Trilobed protease; beta 99.6 8.6E-14 2.9E-18 115.5 20.7 220 17-261 15-293 (347)
192 2z2n_A Virginiamycin B lyase; 99.6 1.5E-11 5E-16 99.5 33.4 236 13-261 11-256 (299)
193 2bkl_A Prolyl endopeptidase; m 99.6 3.8E-13 1.3E-17 122.3 23.3 228 28-258 76-348 (695)
194 1yr2_A Prolyl oligopeptidase; 99.6 7.7E-13 2.6E-17 121.1 24.3 242 14-262 160-444 (741)
195 3hrp_A Uncharacterized protein 99.6 1.3E-11 4.4E-16 105.3 28.9 233 17-257 131-408 (409)
196 3e5z_A Putative gluconolactona 99.6 3.1E-12 1.1E-16 104.0 23.5 201 12-220 64-289 (296)
197 2z2n_A Virginiamycin B lyase; 99.5 2.2E-10 7.5E-15 92.5 33.0 233 15-261 55-297 (299)
198 1qks_A Cytochrome CD1 nitrite 99.5 1.6E-11 5.6E-16 108.6 27.8 191 70-263 164-377 (567)
199 2xdw_A Prolyl endopeptidase; a 99.5 5.1E-12 1.8E-16 115.1 25.1 232 29-262 81-371 (710)
200 3sjl_D Methylamine dehydrogena 99.5 2.7E-12 9.2E-17 107.6 21.1 237 21-263 82-367 (386)
201 3g4e_A Regucalcin; six bladed 99.5 1.3E-10 4.4E-15 94.6 30.0 222 20-248 16-262 (297)
202 3iuj_A Prolyl endopeptidase; h 99.5 8.9E-12 3.1E-16 113.2 25.2 239 14-262 126-408 (693)
203 1rwi_B Serine/threonine-protei 99.5 9.1E-12 3.1E-16 99.5 20.8 199 15-220 65-267 (270)
204 2qc5_A Streptogramin B lactona 99.5 1.2E-09 4E-14 88.2 33.1 235 14-261 17-261 (300)
205 3dr2_A Exported gluconolactona 99.5 1E-10 3.5E-15 95.6 26.3 230 12-253 40-301 (305)
206 1xip_A Nucleoporin NUP159; bet 99.5 2.2E-12 7.7E-17 108.4 16.4 169 18-204 39-230 (388)
207 1yr2_A Prolyl oligopeptidase; 99.5 3.1E-11 1.1E-15 110.4 24.5 227 28-258 115-392 (741)
208 3c75_H MADH, methylamine dehyd 99.4 9.2E-12 3.1E-16 106.0 18.6 232 29-263 82-406 (426)
209 2mad_H Methylamine dehydrogena 99.4 6.6E-10 2.3E-14 93.5 29.1 202 21-229 70-363 (373)
210 3sjl_D Methylamine dehydrogena 99.4 5.9E-11 2E-15 99.6 21.0 228 29-263 42-324 (386)
211 2ghs_A AGR_C_1268P; regucalcin 99.4 2.7E-09 9.1E-14 88.0 30.9 221 20-249 52-293 (326)
212 2qc5_A Streptogramin B lactona 99.4 5.2E-09 1.8E-13 84.4 32.1 230 15-257 60-298 (300)
213 1xip_A Nucleoporin NUP159; bet 99.4 1.3E-11 4.4E-16 103.8 16.4 169 63-245 39-230 (388)
214 1mda_H Methylamine dehydrogena 99.4 3.8E-11 1.3E-15 100.5 18.3 225 31-263 32-350 (368)
215 1kb0_A Quinohemoprotein alcoho 99.3 4.9E-10 1.7E-14 101.4 22.9 232 31-263 128-511 (677)
216 3hrp_A Uncharacterized protein 99.3 3E-09 1E-13 90.6 26.5 195 62-262 131-357 (409)
217 2hz6_A Endoplasmic reticulum t 99.3 1.4E-12 4.7E-17 109.8 5.7 191 30-229 8-204 (369)
218 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 1.2E-09 4.1E-14 89.0 22.5 196 15-217 69-299 (314)
219 1yiq_A Quinohemoprotein alcoho 99.3 2E-09 6.9E-14 97.6 25.3 232 31-263 121-509 (689)
220 3c75_H MADH, methylamine dehyd 99.3 1.1E-09 3.7E-14 93.3 21.4 206 21-229 122-415 (426)
221 2hz6_A Endoplasmic reticulum t 99.3 1.4E-12 4.9E-17 109.7 3.3 186 72-263 8-196 (369)
222 1fwx_A Nitrous oxide reductase 99.3 2E-09 6.9E-14 94.2 22.6 239 21-261 91-433 (595)
223 3iuj_A Prolyl endopeptidase; h 99.2 1.5E-09 5E-14 98.7 22.2 199 59-261 126-361 (693)
224 1mda_H Methylamine dehydrogena 99.2 5.4E-10 1.9E-14 93.6 16.0 209 21-236 69-365 (368)
225 2iwa_A Glutamine cyclotransfer 99.2 2.3E-08 7.8E-13 79.7 24.3 200 53-260 11-238 (266)
226 3q7m_A Lipoprotein YFGL, BAMB; 99.2 8.5E-09 2.9E-13 86.4 22.8 222 31-263 103-341 (376)
227 3q7m_A Lipoprotein YFGL, BAMB; 99.2 9.5E-09 3.3E-13 86.1 21.9 223 31-263 53-300 (376)
228 2qe8_A Uncharacterized protein 99.2 2.4E-08 8.3E-13 82.8 23.3 227 17-249 17-311 (343)
229 1npe_A Nidogen, entactin; glyc 99.1 9.5E-07 3.2E-11 70.4 30.7 206 18-227 37-248 (267)
230 2ece_A 462AA long hypothetical 99.1 5.4E-08 1.9E-12 82.6 24.1 216 29-247 93-399 (462)
231 3g4e_A Regucalcin; six bladed 99.1 1.3E-07 4.6E-12 76.6 25.7 196 64-263 15-233 (297)
232 1npe_A Nidogen, entactin; glyc 99.1 1.1E-06 3.7E-11 70.0 30.5 228 32-263 2-242 (267)
233 2qe8_A Uncharacterized protein 99.1 6.1E-08 2.1E-12 80.4 22.4 198 62-261 17-280 (343)
234 2iwa_A Glutamine cyclotransfer 99.0 1.2E-07 4E-12 75.5 22.0 192 18-217 22-237 (266)
235 3nol_A Glutamine cyclotransfer 99.0 7.1E-08 2.4E-12 76.1 20.4 194 53-256 33-251 (262)
236 1yiq_A Quinohemoprotein alcoho 99.0 3.4E-08 1.2E-12 89.6 21.2 190 40-229 182-517 (689)
237 2ad6_A Methanol dehydrogenase 99.0 9.1E-08 3.1E-12 84.9 23.3 230 31-263 115-498 (571)
238 3dr2_A Exported gluconolactona 99.0 8.6E-08 2.9E-12 78.1 20.6 186 13-207 82-297 (305)
239 3nok_A Glutaminyl cyclase; bet 99.0 2.1E-07 7.1E-12 73.5 21.5 187 18-214 56-261 (268)
240 3nol_A Glutamine cyclotransfer 99.0 1.6E-07 5.4E-12 74.2 20.5 187 19-215 45-252 (262)
241 2ghs_A AGR_C_1268P; regucalcin 99.0 5.6E-07 1.9E-11 74.0 24.9 180 16-202 89-286 (326)
242 3mbr_X Glutamine cyclotransfer 99.0 3.4E-07 1.2E-11 71.6 21.8 186 54-247 12-223 (243)
243 1kb0_A Quinohemoprotein alcoho 99.0 1.4E-07 4.8E-12 85.4 22.6 189 40-228 189-518 (677)
244 3nok_A Glutaminyl cyclase; bet 99.0 1.4E-07 4.9E-12 74.5 19.0 185 53-247 45-254 (268)
245 2fp8_A Strictosidine synthase; 98.9 3.8E-06 1.3E-10 68.7 28.3 235 14-259 16-313 (322)
246 1kv9_A Type II quinohemoprotei 98.9 6.7E-07 2.3E-11 80.8 24.5 232 31-263 117-492 (668)
247 2ece_A 462AA long hypothetical 98.9 2.5E-07 8.5E-12 78.5 20.0 177 29-206 147-399 (462)
248 1fwx_A Nitrous oxide reductase 98.9 1.6E-07 5.4E-12 82.3 18.8 185 72-259 100-361 (595)
249 1w6s_A Methanol dehydrogenase 98.9 8.1E-07 2.8E-11 79.1 23.3 228 34-263 124-507 (599)
250 3mbr_X Glutamine cyclotransfer 98.9 3.6E-06 1.2E-10 65.8 23.6 191 14-214 16-230 (243)
251 3hxj_A Pyrrolo-quinoline quino 98.8 1.3E-06 4.5E-11 71.3 21.9 212 33-258 109-323 (330)
252 1flg_A Protein (quinoprotein e 98.8 4.7E-06 1.6E-10 74.0 25.0 229 31-263 117-520 (582)
253 3hxj_A Pyrrolo-quinoline quino 98.7 6.4E-07 2.2E-11 73.2 15.7 214 30-262 70-286 (330)
254 2xe4_A Oligopeptidase B; hydro 98.6 7.8E-06 2.7E-10 74.9 22.5 237 18-261 175-460 (751)
255 2p4o_A Hypothetical protein; p 98.6 3.6E-05 1.2E-09 62.5 24.4 222 18-247 33-277 (306)
256 1kv9_A Type II quinohemoprotei 98.6 6.7E-06 2.3E-10 74.3 19.0 189 40-228 177-499 (668)
257 3qqz_A Putative uncharacterize 98.5 0.00023 7.8E-09 56.2 29.2 197 13-214 23-250 (255)
258 4hw6_A Hypothetical protein, I 98.5 0.0004 1.4E-08 59.4 27.3 236 18-257 140-431 (433)
259 3v65_B Low-density lipoprotein 98.5 0.00045 1.5E-08 58.0 28.1 204 19-225 118-326 (386)
260 4a2l_A BT_4663, two-component 98.4 0.00077 2.6E-08 62.0 30.0 232 19-261 175-438 (795)
261 2p4o_A Hypothetical protein; p 98.4 0.0005 1.7E-08 55.7 28.5 203 53-262 24-244 (306)
262 2ad6_A Methanol dehydrogenase 98.4 4.8E-05 1.7E-09 67.4 19.9 145 84-229 273-506 (571)
263 4a2l_A BT_4663, two-component 98.4 0.0016 5.6E-08 59.8 32.3 233 16-261 214-482 (795)
264 2fp8_A Strictosidine synthase; 98.3 0.00021 7.3E-09 58.2 21.6 193 64-262 21-271 (322)
265 3tc9_A Hypothetical hydrolase; 98.3 0.001 3.5E-08 56.7 26.3 235 19-257 139-428 (430)
266 1k3i_A Galactose oxidase precu 98.3 1.7E-05 5.8E-10 71.5 15.9 228 30-261 197-499 (656)
267 2xe4_A Oligopeptidase B; hydro 98.3 4.6E-05 1.6E-09 69.8 17.7 196 59-255 170-394 (751)
268 1flg_A Protein (quinoprotein e 98.3 0.00054 1.9E-08 60.8 23.8 146 83-229 291-528 (582)
269 3v65_B Low-density lipoprotein 98.3 0.0014 4.9E-08 55.0 28.9 219 40-262 95-321 (386)
270 1ijq_A LDL receptor, low-densi 98.2 0.0015 5.1E-08 53.2 29.6 204 17-224 30-245 (316)
271 3amr_A 3-phytase; beta-propell 98.2 0.0014 4.8E-08 53.9 22.8 201 21-227 30-274 (355)
272 3v64_C Agrin; beta propeller, 98.2 0.0018 6.2E-08 53.6 29.3 203 19-224 75-282 (349)
273 3sov_A LRP-6, low-density lipo 98.2 0.0018 6.3E-08 52.8 27.6 203 19-224 37-245 (318)
274 3p5b_L Low density lipoprotein 98.1 0.0026 8.9E-08 53.7 30.3 225 33-262 85-323 (400)
275 3amr_A 3-phytase; beta-propell 98.1 0.00073 2.5E-08 55.6 20.1 187 74-262 41-267 (355)
276 1w6s_A Methanol dehydrogenase 98.1 0.00055 1.9E-08 60.9 20.4 188 74-263 63-346 (599)
277 1ijq_A LDL receptor, low-densi 98.1 0.0027 9.3E-08 51.7 30.3 217 41-262 10-241 (316)
278 3p5b_L Low density lipoprotein 98.1 0.0036 1.2E-07 52.8 31.4 206 16-224 111-327 (400)
279 3m0c_C LDL receptor, low-densi 98.0 0.0076 2.6E-07 55.4 30.0 220 39-262 402-635 (791)
280 3v9f_A Two-component system se 98.0 0.0079 2.7E-07 55.2 27.4 232 16-261 312-570 (781)
281 3v64_C Agrin; beta propeller, 98.0 0.0041 1.4E-07 51.4 31.1 219 40-262 52-278 (349)
282 1n7d_A LDL receptor, low-densi 98.0 0.00016 5.5E-09 65.6 15.4 204 19-225 408-622 (699)
283 4hw6_A Hypothetical protein, I 98.0 0.0029 9.9E-08 54.0 21.5 195 64-261 141-375 (433)
284 3tc9_A Hypothetical hydrolase; 97.9 0.0014 4.7E-08 56.0 18.7 151 64-216 139-300 (430)
285 3v9f_A Two-component system se 97.9 0.015 5E-07 53.4 29.1 232 17-261 211-480 (781)
286 1k3i_A Galactose oxidase precu 97.8 0.00057 2E-08 61.5 15.7 193 66-260 190-442 (656)
287 2vpj_A Kelch-like protein 12; 97.8 0.0041 1.4E-07 49.9 19.2 223 30-261 14-280 (301)
288 3m0c_C LDL receptor, low-densi 97.8 0.02 6.8E-07 52.6 29.2 202 17-221 424-636 (791)
289 3sov_A LRP-6, low-density lipo 97.8 0.0094 3.2E-07 48.6 27.1 218 40-262 12-241 (318)
290 2xbg_A YCF48-like protein; pho 97.8 0.0099 3.4E-07 48.5 27.5 225 16-256 79-319 (327)
291 3kya_A Putative phosphatase; s 97.7 0.015 5E-07 50.3 21.7 151 64-215 141-339 (496)
292 4a0p_A LRP6, LRP-6, low-densit 97.7 0.026 8.9E-07 50.5 27.9 198 17-219 37-239 (628)
293 1n7d_A LDL receptor, low-densi 97.7 0.00051 1.7E-08 62.4 12.8 220 40-263 385-618 (699)
294 3s94_A LRP-6, low-density lipo 97.7 0.022 7.5E-07 50.9 23.1 197 19-219 42-245 (619)
295 2xbg_A YCF48-like protein; pho 97.6 0.018 6E-07 47.0 24.0 189 17-214 122-319 (327)
296 2p9w_A MAL S 1 allergenic prot 97.6 0.013 4.3E-07 47.9 19.0 153 21-178 17-216 (334)
297 3ii7_A Kelch-like protein 7; p 97.6 0.014 4.8E-07 46.9 18.7 221 31-261 12-274 (306)
298 4a0p_A LRP6, LRP-6, low-densit 97.5 0.047 1.6E-06 48.8 31.0 220 39-262 13-240 (628)
299 2xn4_A Kelch-like protein 2; s 97.5 0.016 5.5E-07 46.4 18.2 222 30-261 15-278 (302)
300 3kya_A Putative phosphatase; s 97.5 0.043 1.5E-06 47.4 26.8 237 19-258 141-474 (496)
301 1zgk_A Kelch-like ECH-associat 97.5 0.0087 3E-07 48.3 16.3 222 29-261 23-289 (308)
302 3qqz_A Putative uncharacterize 97.4 0.028 9.5E-07 44.2 27.3 200 56-260 21-254 (255)
303 2woz_A Kelch repeat and BTB do 97.0 0.091 3.1E-06 42.3 17.9 221 33-261 18-289 (318)
304 4asc_A Kelch repeat and BTB do 97.0 0.098 3.3E-06 42.1 19.2 218 33-260 7-278 (315)
305 3s94_A LRP-6, low-density lipo 97.0 0.19 6.5E-06 44.8 27.5 220 39-262 16-246 (619)
306 2vpj_A Kelch-like protein 12; 96.5 0.16 5.6E-06 40.3 15.8 181 30-218 62-279 (301)
307 2be1_A Serine/threonine-protei 96.5 0.028 9.6E-07 46.1 11.1 111 31-141 10-138 (339)
308 2uvk_A YJHT; unknown function, 96.3 0.14 4.7E-06 41.9 14.3 53 209-263 286-346 (357)
309 2p9w_A MAL S 1 allergenic prot 96.3 0.34 1.2E-05 39.5 20.2 151 65-217 16-215 (334)
310 3ei3_A DNA damage-binding prot 96.0 1.2 4.2E-05 42.8 28.9 237 16-258 553-872 (1158)
311 3sre_A PON1, serum paraoxonase 96.0 0.56 1.9E-05 38.7 18.3 135 122-258 81-251 (355)
312 3ii7_A Kelch-like protein 7; p 95.9 0.28 9.7E-06 39.1 13.8 181 30-218 55-273 (306)
313 2ism_A Putative oxidoreductase 95.8 0.62 2.1E-05 38.2 25.5 98 18-121 32-153 (352)
314 2xn4_A Kelch-like protein 2; s 95.7 0.38 1.3E-05 38.2 14.1 182 30-219 61-278 (302)
315 2ism_A Putative oxidoreductase 95.7 0.68 2.3E-05 38.0 18.6 138 63-205 32-220 (352)
316 3pbp_A Nucleoporin NUP82; beta 95.6 0.87 3E-05 38.5 18.7 133 40-173 40-208 (452)
317 1zgk_A Kelch-like ECH-associat 95.4 0.3 1E-05 39.0 12.3 181 30-219 70-289 (308)
318 2xzh_A Clathrin heavy chain 1; 95.2 1 3.4E-05 36.8 24.0 211 42-263 50-294 (365)
319 2be1_A Serine/threonine-protei 95.1 0.07 2.4E-06 43.8 7.7 104 160-263 12-134 (339)
320 3pbp_A Nucleoporin NUP82; beta 95.0 0.87 3E-05 38.5 14.0 93 167-259 40-158 (452)
321 1bpo_A Protein (clathrin); cla 94.9 1.5 5.3E-05 37.2 20.8 212 42-263 49-293 (494)
322 2zwa_A Leucine carboxyl methyl 94.0 3.1 0.00011 37.6 16.4 148 30-179 397-579 (695)
323 2uvk_A YJHT; unknown function, 93.9 1 3.4E-05 36.7 12.1 52 30-82 65-128 (357)
324 1xi4_A Clathrin heavy chain; a 93.9 5.4 0.00019 39.2 18.2 212 42-263 49-293 (1630)
325 4asc_A Kelch repeat and BTB do 93.6 2.2 7.7E-05 33.9 16.2 176 76-260 8-222 (315)
326 3ei3_A DNA damage-binding prot 93.5 5.7 0.00019 38.2 28.0 208 33-244 525-753 (1158)
327 3sre_A PON1, serum paraoxonase 92.7 3.7 0.00013 33.8 22.7 165 39-205 81-284 (355)
328 1cru_A Protein (soluble quinop 91.8 5.5 0.00019 33.9 18.6 58 63-120 28-97 (454)
329 3sbq_A Nitrous-oxide reductase 91.2 2.7 9.4E-05 36.8 11.3 116 101-217 321-478 (638)
330 1tl2_A L10, protein (tachylect 91.2 4.1 0.00014 31.2 12.2 137 62-205 41-199 (236)
331 3das_A Putative oxidoreductase 91.0 5.6 0.00019 32.5 18.3 145 61-206 31-220 (347)
332 4hvt_A Ritya.17583.B, post-pro 89.9 11 0.00038 34.1 20.6 227 29-258 139-429 (711)
333 2zwa_A Leucine carboxyl methyl 89.8 11 0.00038 33.9 17.0 188 71-261 396-637 (695)
334 2woz_A Kelch repeat and BTB do 88.7 7.8 0.00027 30.7 17.1 177 76-260 19-232 (318)
335 3a9g_A Putative uncharacterize 88.6 8.9 0.0003 31.3 25.2 223 17-247 29-330 (354)
336 4gq2_M Nucleoporin NUP120; bet 87.9 6.4 0.00022 37.0 12.1 38 63-100 237-274 (950)
337 3ott_A Two-component system se 87.6 16 0.00054 33.1 24.4 222 18-254 374-622 (758)
338 3a9g_A Putative uncharacterize 87.5 10 0.00036 30.8 20.9 141 63-206 30-216 (354)
339 3sbq_A Nitrous-oxide reductase 85.1 10 0.00035 33.3 10.9 84 147-230 324-431 (638)
340 1tl2_A L10, protein (tachylect 84.7 12 0.00039 28.7 11.7 102 16-127 40-157 (236)
341 2g8s_A Glucose/sorbosone dehyd 82.1 19 0.00065 29.2 26.0 230 18-257 19-350 (353)
342 1xi4_A Clathrin heavy chain; a 79.6 52 0.0018 32.7 15.1 159 21-184 108-296 (1630)
343 3f7f_A Nucleoporin NUP120; nuc 76.9 14 0.00047 33.5 9.1 62 198-259 231-305 (729)
344 4fhn_B Nucleoporin NUP120; pro 70.2 3.7 0.00013 39.4 4.2 37 64-100 240-276 (1139)
345 4gq2_M Nucleoporin NUP120; bet 66.3 87 0.003 29.4 17.8 39 189-227 237-276 (950)
346 3f7f_A Nucleoporin NUP120; nuc 66.0 11 0.00039 34.0 6.1 30 72-101 230-259 (729)
347 2wg3_C Hedgehog-interacting pr 65.7 62 0.0021 27.5 13.0 102 18-122 15-158 (463)
348 1cru_A Protein (soluble quinop 55.1 95 0.0033 26.2 21.8 102 17-121 27-162 (454)
349 2g8s_A Glucose/sorbosone dehyd 53.7 86 0.0029 25.2 23.9 68 147-214 272-349 (353)
350 4fhn_B Nucleoporin NUP120; pro 50.2 16 0.00056 35.0 4.7 29 29-57 247-275 (1139)
351 3uc1_A DNA gyrase subunit A; D 49.8 99 0.0034 24.8 17.4 103 29-132 107-227 (327)
352 3qhy_B Beta-lactamase inhibito 46.6 1E+02 0.0034 24.0 18.5 217 18-258 25-245 (282)
353 2wg3_C Hedgehog-interacting pr 41.9 1.6E+02 0.0055 24.9 13.3 102 105-206 16-158 (463)
354 3s25_A Hypothetical 7-bladed b 41.8 1.3E+02 0.0043 23.7 18.2 138 68-218 59-217 (302)
355 3zwu_A Alkaline phosphatase PH 41.0 1.7E+02 0.0059 25.8 9.4 56 65-120 479-548 (592)
356 2xzh_A Clathrin heavy chain 1; 34.5 1.9E+02 0.0065 23.7 27.8 193 30-229 77-302 (365)
357 3zwu_A Alkaline phosphatase PH 33.8 1.2E+02 0.0041 26.7 7.2 61 105-165 478-550 (592)
358 4a9v_A PHOX; hydrolase, beta-p 32.1 2.6E+02 0.0091 24.6 9.2 59 63-121 477-549 (592)
359 3ott_A Two-component system se 30.8 2.9E+02 0.01 24.7 32.6 230 19-261 234-504 (758)
360 3qhy_B Beta-lactamase inhibito 30.5 1.9E+02 0.0064 22.4 16.9 181 18-218 64-247 (282)
361 1bpo_A Protein (clathrin); cla 26.7 3E+02 0.01 23.5 28.0 190 31-228 77-300 (494)
362 3q6k_A 43.2 kDa salivary prote 23.1 3.2E+02 0.011 22.5 16.0 135 125-259 124-306 (381)
363 3s25_A Hypothetical 7-bladed b 22.9 2.8E+02 0.0094 21.7 18.3 101 110-220 60-179 (302)
364 3ge2_A Lipoprotein, putative; 21.9 1.9E+02 0.0065 19.5 5.7 62 29-93 50-111 (130)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5.2e-45 Score=300.49 Aligned_cols=254 Identities=19% Similarity=0.231 Sum_probs=220.6
Q ss_pred eecceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeE
Q 024676 6 VAVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTA 85 (264)
Q Consensus 6 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v 85 (264)
+.....+.+|+++|.+|+|+| +|++|++|+.|+.|++||..+++.++.+.+|..+|.+++|++++.++++|+.|++|
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp---~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i 79 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHP---TEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRI 79 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECS---SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEE
T ss_pred ceeEEeecCCCCceEEEEECC---CCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEE
Confidence 445667899999999999996 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCcEEEEee-cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEe
Q 024676 86 KLWDALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSC 164 (264)
Q Consensus 86 ~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 164 (264)
++||+.+++.+..+. |...|++++|+|++++|++|+.|++|++||++++.........|...+.+++|+|.++.+++++
T Consensus 80 ~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sg 159 (304)
T 2ynn_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (304)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEE
T ss_pred EEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEE
Confidence 999999998887775 8889999999999999999999999999999866444445567888999999998777788899
Q ss_pred eCCCeEEEEECCCCceeEEec--CCCCEEEEEEcC--CCcEEE-EeCCCcEEEEECCCceeeeEEecCCCC-ceeeEcCC
Q 024676 165 TDSGGVRLWDARSGKIVQTLE--TKSPVTSAEVSR--DGRYIT-TADGSSVKFWDANHFGLVKGYNMPCNT-ESASLEPK 238 (264)
Q Consensus 165 ~~d~~v~iwd~~~~~~~~~~~--~~~~v~~~~~s~--~~~~l~-~~~~~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~ 238 (264)
+.|++|++||+++++....+. +...+..+.++| ++.+++ ++.|++|++||+++++++..+..+... ..+.+.|
T Consensus 160 s~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p- 238 (304)
T 2ynn_A 160 CLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP- 238 (304)
T ss_dssp ETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECS-
T ss_pred eCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECC-
Confidence 999999999999887665553 335788999987 566665 567899999999999999988876544 4456666
Q ss_pred CCCEEEEecCCCeEEEEEcCcceee
Q 024676 239 LGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 239 ~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
.+.+|++||.|++|++||+.+++.+
T Consensus 239 ~~~~l~s~s~Dg~i~iWd~~~~~~~ 263 (304)
T 2ynn_A 239 TLPIIISGSEDGTLKIWNSSTYKVE 263 (304)
T ss_dssp SSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcee
Confidence 5889999999999999999988754
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=8.2e-42 Score=292.67 Aligned_cols=247 Identities=21% Similarity=0.343 Sum_probs=215.0
Q ss_pred eEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEe
Q 024676 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (264)
Q Consensus 10 ~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd 89 (264)
..+.||..+|.+++|+| ++++|++|+.|++|++||..+++...++.+|.+.|.+++|+|++.++++|+.|++|++||
T Consensus 102 ~~l~gh~~~V~~~~~~p---~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd 178 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHP---VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178 (410)
T ss_dssp CEEECCSSCEEEEEECS---SSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEE
T ss_pred EeecccCCcEEEEEEcC---CCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEe
Confidence 45679999999999996 888999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEee-cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCC
Q 024676 90 ALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSG 168 (264)
Q Consensus 90 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~ 168 (264)
+.+++.+..+. |...|.+++|+|+++++++|+.|++|++||++++... ..+..|...+.++.+.+++ .++++++.|+
T Consensus 179 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~-~~~~~h~~~v~~~~~~~~g-~~l~s~s~D~ 256 (410)
T 1vyh_C 179 FQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCV-KTFTGHREWVRMVRPNQDG-TLIASCSNDQ 256 (410)
T ss_dssp TTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE-EEEECCSSCEEEEEECTTS-SEEEEEETTS
T ss_pred CCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE-EEEeCCCccEEEEEECCCC-CEEEEEcCCC
Confidence 99988877764 8889999999999999999999999999999877543 3445678889999988754 5677888899
Q ss_pred eEEEEECCCCceeEEec-CCCCEEEEEEcCC--------------------CcEEE-EeCCCcEEEEECCCceeeeEEec
Q 024676 169 GVRLWDARSGKIVQTLE-TKSPVTSAEVSRD--------------------GRYIT-TADGSSVKFWDANHFGLVKGYNM 226 (264)
Q Consensus 169 ~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~--------------------~~~l~-~~~~~~i~iwd~~~~~~~~~~~~ 226 (264)
+|++||++++++...+. +...+.+++|+|+ +.+++ ++.|+.|++||++++.++..+..
T Consensus 257 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~ 336 (410)
T 1vyh_C 257 TVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG 336 (410)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred eEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEEC
Confidence 99999999999888775 4567999999996 44554 56789999999999999988876
Q ss_pred CCCC-ceeeEcCCCCCEEEEecCCCeEEEEEcCccee
Q 024676 227 PCNT-ESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (264)
Q Consensus 227 ~~~~-~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~ 262 (264)
+... ..+.+.+ .+++|++||.|+.|++||+.+++.
T Consensus 337 h~~~v~~v~~~~-~g~~l~s~s~D~~i~vwd~~~~~~ 372 (410)
T 1vyh_C 337 HDNWVRGVLFHS-GGKFILSCADDKTLRVWDYKNKRC 372 (410)
T ss_dssp CSSCEEEEEECS-SSSCEEEEETTTEEEEECCTTSCC
T ss_pred CCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCce
Confidence 5543 4566766 589999999999999999988764
No 3
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=284.97 Aligned_cols=244 Identities=18% Similarity=0.171 Sum_probs=201.1
Q ss_pred eccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEE----eeeCCcCCEEEEEECCCCcEEEEecCCCeEEEE
Q 024676 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIG----TFEGHKGAVWSCCLDANALFSASGSADFTAKLW 88 (264)
Q Consensus 13 ~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~----~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iw 88 (264)
..|..+|.+|+|+| ++ .|++|+.||+|++||+.+++.+. .+.+|++.|.+++|+|++.+|+||+.|++|++|
T Consensus 79 ~~~~~~v~~~~~s~---d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iw 154 (344)
T 4gqb_B 79 VQTEAGVADLTWVG---ER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVW 154 (344)
T ss_dssp EEESSCEEEEEEET---TT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred eccCCCEEEEEEeC---CC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 45778899999996 54 67899999999999999887543 345899999999999999999999999999999
Q ss_pred eCCCCcEEEEee-cCCeEEEEEECCCC-CEEEEeeCCCcEEEeeCCCCCCCCeEe-ccCCCCeEEEEEecCCCeEEEEee
Q 024676 89 DALTGDEKHSFE-HKHIVRACAFSEDT-HLLLTGGFEKILRIFDLNRPDAPPREV-GNSSGSIRTVAWLHSDQTILSSCT 165 (264)
Q Consensus 89 d~~~~~~~~~~~-~~~~v~~~~~~~~~-~~l~s~~~d~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~ 165 (264)
|+.+++.+..+. |...|++++|+|++ .++++++.|++|++||+++++...... ..+...+.+++|+|.+..++++++
T Consensus 155 d~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~ 234 (344)
T 4gqb_B 155 DLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGD 234 (344)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEE
T ss_pred ECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEec
Confidence 999999888875 88999999999987 578899999999999998776533322 234456889999998888899999
Q ss_pred CCCeEEEEECCCCceeEEecC-CCCEEEEEEcCCC-cEEE-EeCCCcEEEEECCCceeeeEEecCCCCceeeEcCCCCCE
Q 024676 166 DSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDG-RYIT-TADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNI 242 (264)
Q Consensus 166 ~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~s~~~-~~l~-~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (264)
.|++|++||+++++++..+.. ...|.+++|+|++ ++|+ ++.|++|++||++++++++..........++|+|....+
T Consensus 235 ~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~l 314 (344)
T 4gqb_B 235 ENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSL 314 (344)
T ss_dssp TTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTE
T ss_pred cCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeE
Confidence 999999999999999888864 5679999999998 5565 567899999999998876543333445677888876678
Q ss_pred EEEecCCCeEEEEEcCcc
Q 024676 243 FIAGGEDMWVHVFDFHTG 260 (264)
Q Consensus 243 ~~~gs~d~~v~vwd~~~g 260 (264)
|++||.|++|++|++.+.
T Consensus 315 las~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 315 LTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp EEEEETTSCEEEEECCC-
T ss_pred EEEEcCCCeEEEEECCCC
Confidence 889999999999998754
No 4
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.7e-41 Score=279.30 Aligned_cols=245 Identities=24% Similarity=0.312 Sum_probs=210.9
Q ss_pred eEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEe
Q 024676 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (264)
Q Consensus 10 ~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd 89 (264)
..+.+|+.+|.+++|+| +|++|++|+.|++|++||+.+++.++.+.+|.+.|.+++|+|++.++++|+.|++|++||
T Consensus 59 ~~~~~h~~~v~~~~~s~---dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd 135 (319)
T 3frx_A 59 RSFKGHSHIVQDCTLTA---DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWT 135 (319)
T ss_dssp EEEECCSSCEEEEEECT---TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred eEEeCCcccEEEEEECC---CCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 35679999999999996 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEeecCCeEEEEEECCCC------CEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEE
Q 024676 90 ALTGDEKHSFEHKHIVRACAFSEDT------HLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (264)
Q Consensus 90 ~~~~~~~~~~~~~~~v~~~~~~~~~------~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 163 (264)
+..........|...|..+.+.|.. ..+++++.|+.|++||++..+.. .....|...+.+++|+|++. ++++
T Consensus 136 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~-~~~~~h~~~v~~~~~sp~g~-~l~s 213 (319)
T 3frx_A 136 IKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIE-ADFIGHNSNINTLTASPDGT-LIAS 213 (319)
T ss_dssp TTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEE-EEECCCCSCEEEEEECTTSS-EEEE
T ss_pred CCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhh-eeecCCCCcEEEEEEcCCCC-EEEE
Confidence 9765544445688899999999954 48999999999999999865432 34456788999999988654 6777
Q ss_pred eeCCCeEEEEECCCCceeEEecCCCCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeeeEEecC---------CCCceee
Q 024676 164 CTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMP---------CNTESAS 234 (264)
Q Consensus 164 ~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~---------~~~~~~~ 234 (264)
++.|++|++||+++++++..+..+.++.+++|+|++.+++++.+..+++|++.....+..+... ....+++
T Consensus 214 ~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 293 (319)
T 3frx_A 214 AGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLA 293 (319)
T ss_dssp EETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEE
T ss_pred EeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEE
Confidence 8888999999999999998888888999999999999998888888999999988777666421 1234567
Q ss_pred EcCCCCCEEEEecCCCeEEEEEcCcc
Q 024676 235 LEPKLGNIFIAGGEDMWVHVFDFHTG 260 (264)
Q Consensus 235 ~~~~~~~~~~~gs~d~~v~vwd~~~g 260 (264)
++| +|++|++|+.|+.|++||+.++
T Consensus 294 ~sp-dg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 294 WSA-DGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp ECT-TSSEEEEEETTSCEEEEEEEEC
T ss_pred ECC-CCCEEEEeecCceEEEEEEeec
Confidence 777 5999999999999999999775
No 5
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.7e-40 Score=273.95 Aligned_cols=250 Identities=26% Similarity=0.465 Sum_probs=215.0
Q ss_pred ceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEE
Q 024676 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLW 88 (264)
Q Consensus 9 ~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iw 88 (264)
...+.||.++|.+++|+| +|++|++|+.|+.+++|+..+++....+.+|...|.+++|+|++.++++|+.|+.|++|
T Consensus 16 ~~~~~gh~~~v~~~~~s~---~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vw 92 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIW 92 (312)
T ss_dssp EEEECCCSSCEEEEEECT---TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EEEEcccCCcEEEEEECC---CCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEE
Confidence 445679999999999996 89999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCcEEEEee-cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCC
Q 024676 89 DALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS 167 (264)
Q Consensus 89 d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d 167 (264)
|+.+++.+..+. |...|.++.|+|+++++++|+.|+.|++||+++++. ...+..+...+.+++|++++. ++++++.|
T Consensus 93 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d 170 (312)
T 4ery_A 93 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGS-LIVSSSYD 170 (312)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE-EEEECCCSSCEEEEEECTTSS-EEEEEETT
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEE-EEEecCCCCcEEEEEEcCCCC-EEEEEeCC
Confidence 999998877775 788999999999999999999999999999987653 244456778899999987655 56677888
Q ss_pred CeEEEEECCCCceeEEec--CCCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEecCCCC---ceeeEcCCCCC
Q 024676 168 GGVRLWDARSGKIVQTLE--TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCNT---ESASLEPKLGN 241 (264)
Q Consensus 168 ~~v~iwd~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 241 (264)
+.|++||+++++.+..+. ...++..++|+|+++++++ +.++.|++||+++++.+..+..+... ....+.++.+.
T Consensus 171 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (312)
T 4ery_A 171 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK 250 (312)
T ss_dssp SCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSC
T ss_pred CcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCc
Confidence 999999999998877663 3457999999999988765 56899999999999988888654332 23345555688
Q ss_pred EEEEecCCCeEEEEEcCcceee
Q 024676 242 IFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 242 ~~~~gs~d~~v~vwd~~~g~~i 263 (264)
++++|+.|+.|++||+.+++.+
T Consensus 251 ~l~sg~~dg~i~vwd~~~~~~~ 272 (312)
T 4ery_A 251 WIVSGSEDNLVYIWNLQTKEIV 272 (312)
T ss_dssp EEEECCTTSCEEEEETTTCCEE
T ss_pred EEEEECCCCEEEEEECCCchhh
Confidence 9999999999999999988754
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5e-41 Score=287.79 Aligned_cols=244 Identities=23% Similarity=0.354 Sum_probs=213.8
Q ss_pred ceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEE
Q 024676 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLW 88 (264)
Q Consensus 9 ~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iw 88 (264)
...+.+|.++|.+|+|+| +|++|++|+.|++|++||..+++.++++.+|.+.|.+++|+|++.++++|+.|++|++|
T Consensus 143 ~~~l~~h~~~V~~v~~~~---~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~w 219 (410)
T 1vyh_C 143 ERTLKGHTDSVQDISFDH---SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMW 219 (410)
T ss_dssp CEEECCCSSCEEEEEECT---TSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEE
T ss_pred EEEEeccCCcEEEEEEcC---CCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 456689999999999996 88999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCcEEEEee-cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCC----------
Q 024676 89 DALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSD---------- 157 (264)
Q Consensus 89 d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~---------- 157 (264)
|+.++.++..+. |...|..+.++|+++++++|+.|++|++||+++++.. ..+..|...+.+++|.|+.
T Consensus 220 d~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~~~~~~~~ 298 (410)
T 1vyh_C 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK-AELREHRHVVECISWAPESSYSSISEATG 298 (410)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE-EEECCCSSCEEEEEECCSCGGGGGGGCCS
T ss_pred ECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCcee-eEecCCCceEEEEEEcCcccccchhhhcc
Confidence 999998877775 7888999999999999999999999999999876543 3445678899999998753
Q ss_pred ---------CeEEEEeeCCCeEEEEECCCCceeEEecC-CCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEec
Q 024676 158 ---------QTILSSCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNM 226 (264)
Q Consensus 158 ---------~~~~~~~~~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~ 226 (264)
+.++++++.|+.|++||+++++++..+.. ...|.+++|+|++++|++ +.|+.|++||+++++++..+..
T Consensus 299 ~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~ 378 (410)
T 1vyh_C 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378 (410)
T ss_dssp CC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEEC
T ss_pred ccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcC
Confidence 44788889999999999999999888764 567999999999987654 6689999999999998888876
Q ss_pred CCC-CceeeEcCCCCCEEEEecCCCeEEEEEc
Q 024676 227 PCN-TESASLEPKLGNIFIAGGEDMWVHVFDF 257 (264)
Q Consensus 227 ~~~-~~~~~~~~~~~~~~~~gs~d~~v~vwd~ 257 (264)
+.. ...+.++| .+.+|++||.|+.|++|++
T Consensus 379 h~~~v~~l~~~~-~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 379 HEHFVTSLDFHK-TAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp CSSCEEEEEECS-SSSCEEEEETTSEEEEEC-
T ss_pred CCCcEEEEEEcC-CCCEEEEEeCCCcEEEEeC
Confidence 554 45667777 5889999999999999986
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=276.11 Aligned_cols=249 Identities=22% Similarity=0.296 Sum_probs=209.1
Q ss_pred eeccCCCeeeeEeccCC-CCCeEEEEEeCCCCcEEEeCCCCce--EEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEE
Q 024676 12 CHGHSRPVVDLFYSPIT-PDGFFLVSASKDSSPMLRNGETGDW--IGTFEGHKGAVWSCCLDANALFSASGSADFTAKLW 88 (264)
Q Consensus 12 ~~~h~~~v~~~~~~~~~-~~g~~l~t~s~d~~v~i~~~~~~~~--~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iw 88 (264)
..+|.++|++|+|+|.. +++.+|++|+.|++|++|+..+++. ...+.+|...|.+++|++++.+++|++.|++|++|
T Consensus 28 ~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lW 107 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLW 107 (321)
T ss_dssp TTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEE
T ss_pred cccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 36899999999999843 4678999999999999999887653 45789999999999999999999999999999999
Q ss_pred eCCCCcEEEEee-cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCC
Q 024676 89 DALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS 167 (264)
Q Consensus 89 d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d 167 (264)
|+.+++.+..+. +...+..++|+|++++|++++.|+.+++|++++++.. .....+...+.+++|+|++. ++++++.|
T Consensus 108 d~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~-~~~~~~~~~v~~~~~spdg~-~lasg~~d 185 (321)
T 3ow8_A 108 DLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKE-YSLDTRGKFILSIAYSPDGK-YLASGAID 185 (321)
T ss_dssp ETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEE-EEEECSSSCEEEEEECTTSS-EEEEEETT
T ss_pred ECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCcee-EEecCCCceEEEEEECCCCC-EEEEEcCC
Confidence 999998877765 5667889999999999999999999999999876543 33445667899999998665 56677888
Q ss_pred CeEEEEECCCCceeEEecC-CCCEEEEEEcCCCcEEEEe-CCCcEEEEECCCceeeeEEecCCC-CceeeEcCCCCCEEE
Q 024676 168 GGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCN-TESASLEPKLGNIFI 244 (264)
Q Consensus 168 ~~v~iwd~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 244 (264)
+.|++||+++++.+..+.. ..+|.+++|+|++++|+++ .|+.|++||+++.+.+..+..+.. ...+.+.| ++.+|+
T Consensus 186 g~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~ 264 (321)
T 3ow8_A 186 GIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP-DDTHFV 264 (321)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEE
T ss_pred CeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECC-CCCEEE
Confidence 9999999999999888864 4679999999999887765 579999999999988888766544 45677777 588999
Q ss_pred EecCCCeEEEEEcCcceee
Q 024676 245 AGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 245 ~gs~d~~v~vwd~~~g~~i 263 (264)
+|+.|+.|++||+.+++.+
T Consensus 265 s~s~D~~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 265 SSSSDKSVKVWDVGTRTCV 283 (321)
T ss_dssp EEETTSCEEEEETTTTEEE
T ss_pred EEeCCCcEEEEeCCCCEEE
Confidence 9999999999999988754
No 8
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.7e-40 Score=281.65 Aligned_cols=250 Identities=25% Similarity=0.380 Sum_probs=198.8
Q ss_pred ceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEE----------
Q 024676 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSAS---------- 78 (264)
Q Consensus 9 ~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s---------- 78 (264)
...+.||+++|.+++|+| ++++|++|+.|++|++||..+++.+..+.+|...|.+++|+|++.++++
T Consensus 59 ~~~l~gH~~~V~~~~~sp---~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw 135 (380)
T 3iz6_a 59 CRTLQGHSGKVYSLDWTP---EKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIF 135 (380)
T ss_dssp EEEECCCSSCEEEEEECT---TSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEE
T ss_pred eecccccccEEEEEEEcC---CCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEE
Confidence 345689999999999996 8999999999999999999998887778777777777777776655554
Q ss_pred ----------------------------------------ecCCCeEEEEeCCCCcEEEEe------ecCCeEEEEEECC
Q 024676 79 ----------------------------------------GSADFTAKLWDALTGDEKHSF------EHKHIVRACAFSE 112 (264)
Q Consensus 79 ----------------------------------------~s~D~~v~iwd~~~~~~~~~~------~~~~~v~~~~~~~ 112 (264)
|+.|++|++||+.++..+..+ .|...|..+.++|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 136 NLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp ECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECS
T ss_pred ECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeec
Confidence 455555555555555544443 2566799999977
Q ss_pred -CCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEecCC----
Q 024676 113 -DTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK---- 187 (264)
Q Consensus 113 -~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~---- 187 (264)
+++++++|+.|++|++||++...........|.+.+.+++|+|++. ++++++.|++|++||+++++++..+..+
T Consensus 216 ~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~ 294 (380)
T 3iz6_a 216 LNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQ-RFGTGSDDGTCRLFDMRTGHQLQVYNREPDRN 294 (380)
T ss_dssp SSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSS-EEEEECSSSCEEEEETTTTEEEEEECCCCSSS
T ss_pred CCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCC-eEEEEcCCCeEEEEECCCCcEEEEeccccccc
Confidence 7899999999999999999855445566667889999999998655 6778888999999999999988776432
Q ss_pred ----CCEEEEEEcCCCcEEEEe-CCCcEEEEECCCceeeeEEe----cC-CCCceeeEcCCCCCEEEEecCCCeEEEEEc
Q 024676 188 ----SPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYN----MP-CNTESASLEPKLGNIFIAGGEDMWVHVFDF 257 (264)
Q Consensus 188 ----~~v~~~~~s~~~~~l~~~-~~~~i~iwd~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~ 257 (264)
..+.+++|+|+|++++++ .++.|++||+...+.+..+. .+ ....++.++| ++.+|++||.|+.|++|++
T Consensus 295 ~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~-dg~~l~sgs~D~~i~iW~~ 373 (380)
T 3iz6_a 295 DNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSS-DGSALCTGSWDKNLKIWAF 373 (380)
T ss_dssp CCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECS-SSSEEEEECTTSCEEEEEC
T ss_pred ccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECC-CCCEEEEeeCCCCEEEEec
Confidence 237899999999988765 57999999999888776662 22 2345677777 5899999999999999999
Q ss_pred Ccceee
Q 024676 258 HTGEQI 263 (264)
Q Consensus 258 ~~g~~i 263 (264)
..++++
T Consensus 374 ~~~~~i 379 (380)
T 3iz6_a 374 SGHRKI 379 (380)
T ss_dssp CSSSSC
T ss_pred CCCccc
Confidence 877654
No 9
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.2e-40 Score=273.31 Aligned_cols=243 Identities=20% Similarity=0.321 Sum_probs=211.9
Q ss_pred ceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEE
Q 024676 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLW 88 (264)
Q Consensus 9 ~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iw 88 (264)
...+.||..+|.+++|+| ++.++++++.|++|++||+.+++.+..+.+|...+.+++|+|++.++++|+.|+.|++|
T Consensus 73 ~~~l~gh~~~v~~~~~~~---~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~ 149 (321)
T 3ow8_A 73 QWSLEGHQLGVVSVDISH---TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIF 149 (321)
T ss_dssp EEEECCCSSCEEEEEECS---SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEE
T ss_pred eeeeccCCCCEEEEEECC---CCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEE
Confidence 345689999999999996 78899999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCcEEEEee-cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCC
Q 024676 89 DALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS 167 (264)
Q Consensus 89 d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d 167 (264)
|+.++.....+. +...+..++|+|++++|++|+.|+.|++||+++++.. ..+..|...+.+++|+|++. ++++++.|
T Consensus 150 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~-~~~~~h~~~v~~l~~spd~~-~l~s~s~d 227 (321)
T 3ow8_A 150 GVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLL-HTLEGHAMPIRSLTFSPDSQ-LLVTASDD 227 (321)
T ss_dssp ETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE-EEECCCSSCCCEEEECTTSC-EEEEECTT
T ss_pred EcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE-EEEcccCCceeEEEEcCCCC-EEEEEcCC
Confidence 999988777664 6678999999999999999999999999999876543 34456788999999998655 67778888
Q ss_pred CeEEEEECCCCceeEEecC-CCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEecCC-CCceeeEcCCCCCEEE
Q 024676 168 GGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPC-NTESASLEPKLGNIFI 244 (264)
Q Consensus 168 ~~v~iwd~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 244 (264)
+.|++||+++++....+.. ...|.+++|+|++.+|++ +.|+.|++||+++++++..+..+. ....+.+.+ ++.+|+
T Consensus 228 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~-~g~~l~ 306 (321)
T 3ow8_A 228 GYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNG-NGSKIV 306 (321)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEE
T ss_pred CeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECC-CCCEEE
Confidence 9999999999998887764 456999999999987765 568999999999999998886544 445667777 588999
Q ss_pred EecCCCeEEEEEc
Q 024676 245 AGGEDMWVHVFDF 257 (264)
Q Consensus 245 ~gs~d~~v~vwd~ 257 (264)
+++.|+.|++||.
T Consensus 307 s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 307 SVGDDQEIHIYDC 319 (321)
T ss_dssp EEETTCCEEEEEC
T ss_pred EEeCCCeEEEEeC
Confidence 9999999999995
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.1e-39 Score=270.37 Aligned_cols=249 Identities=20% Similarity=0.297 Sum_probs=210.0
Q ss_pred ecceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCC-----CceEEeeeCCcCCEEEEEECCCCcEEEEecC
Q 024676 7 AVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET-----GDWIGTFEGHKGAVWSCCLDANALFSASGSA 81 (264)
Q Consensus 7 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~-----~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~ 81 (264)
.....+.||+++|.+|+|+| .++++|++|+.|++|++|+... +..+..+.+|.+.|.+++|++++.+++||+.
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~--~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~ 85 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSA--GQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASW 85 (319)
T ss_dssp EEEEEECCCSSCEEEEEECS--SCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEEccccceEEEEEccC--CCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeC
Confidence 33445679999999999997 2347999999999999998764 2346789999999999999999999999999
Q ss_pred CCeEEEEeCCCCcEEEEee-cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCC---
Q 024676 82 DFTAKLWDALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSD--- 157 (264)
Q Consensus 82 D~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~--- 157 (264)
|++|++||+.+++....+. |..+|.+++|+|+++++++|+.|++|++||++.. .......|...+..+.+.|..
T Consensus 86 D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~--~~~~~~~h~~~v~~~~~~~~~~~~ 163 (319)
T 3frx_A 86 DKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ--CLATLLGHNDWVSQVRVVPNEKAD 163 (319)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC--EEEEECCCSSCEEEEEECCC----
T ss_pred CCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--eEEEEeccCCcEEEEEEccCCCCC
Confidence 9999999999998877764 8889999999999999999999999999999642 233445678889999998753
Q ss_pred --CeEEEEeeCCCeEEEEECCCCceeEEec-CCCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEecCCCCcee
Q 024676 158 --QTILSSCTDSGGVRLWDARSGKIVQTLE-TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCNTESA 233 (264)
Q Consensus 158 --~~~~~~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~~~~~~ 233 (264)
...+++++.|+.|++||+++++....+. +..+|.+++++|++++|++ +.|+.|++||+++.+.+..+..+.....+
T Consensus 164 ~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~ 243 (319)
T 3frx_A 164 DDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSL 243 (319)
T ss_dssp --CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEE
T ss_pred CCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEE
Confidence 3478888899999999999998877775 4567999999999988765 56899999999999999888877677778
Q ss_pred eEcCCCCCEEEEecCCCeEEEEEcCcce
Q 024676 234 SLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 234 ~~~~~~~~~~~~gs~d~~v~vwd~~~g~ 261 (264)
++.|+ +.++++++.+ .+++|++.++.
T Consensus 244 ~~sp~-~~~la~~~~~-~i~v~~~~~~~ 269 (319)
T 3frx_A 244 AFSPN-RYWLAAATAT-GIKVFSLDPQY 269 (319)
T ss_dssp EECSS-SSEEEEEETT-EEEEEEETTEE
T ss_pred EEcCC-CCEEEEEcCC-CcEEEEeCcCe
Confidence 88884 7888877754 59999987654
No 11
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=9.2e-40 Score=269.09 Aligned_cols=246 Identities=20% Similarity=0.313 Sum_probs=206.5
Q ss_pred eEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEe
Q 024676 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (264)
Q Consensus 10 ~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd 89 (264)
..+.+|..+|.+++|+| ++++|++|+.|+.|++||..+++.+..+.+|.+.|.+++|+|++.+++||+.|++|++||
T Consensus 49 ~~~~~~~~~v~~~~~~~---~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd 125 (304)
T 2ynn_A 49 RSIQVTETPVRAGKFIA---RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWN 125 (304)
T ss_dssp EEEECCSSCEEEEEEEG---GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred EEeeccCCcEEEEEEeC---CCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEE
Confidence 45578999999999996 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcE-EEEe-ecCCeEEEEEECC-CCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecC-CCeEEEEee
Q 024676 90 ALTGDE-KHSF-EHKHIVRACAFSE-DTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHS-DQTILSSCT 165 (264)
Q Consensus 90 ~~~~~~-~~~~-~~~~~v~~~~~~~-~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~ 165 (264)
+.++.. ...+ .|...|.+++|+| ++.+|++|+.|++|++||++...........+...+..+++.+. ++.++++++
T Consensus 126 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s 205 (304)
T 2ynn_A 126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS 205 (304)
T ss_dssp GGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEE
T ss_pred CCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEc
Confidence 988743 3444 4888999999999 67899999999999999998766555555556678888888763 456788889
Q ss_pred CCCeEEEEECCCCceeEEecC-CCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEecCCC-CceeeEcCCCCC-
Q 024676 166 DSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCN-TESASLEPKLGN- 241 (264)
Q Consensus 166 ~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~- 241 (264)
.|++|++||+++++++..+.. ...+.+++|+|++.+|++ +.|++|++||+++++.++.+..+.. ...++++|+++.
T Consensus 206 ~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (304)
T 2ynn_A 206 DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKN 285 (304)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGG
T ss_pred CCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCce
Confidence 999999999999999888864 467999999999987765 5689999999999999998876543 345667776544
Q ss_pred EEEEecCCCeEEEEEcCc
Q 024676 242 IFIAGGEDMWVHVFDFHT 259 (264)
Q Consensus 242 ~~~~gs~d~~v~vwd~~~ 259 (264)
++++|+.|+ +.+|++..
T Consensus 286 ~~asg~~~g-~~~~~~~~ 302 (304)
T 2ynn_A 286 YIASGFDNG-FTVLSLGN 302 (304)
T ss_dssp CEEEEETTE-EEEEECC-
T ss_pred EEEEecCCc-eEEEEecc
Confidence 466776554 78888754
No 12
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.5e-39 Score=271.93 Aligned_cols=248 Identities=18% Similarity=0.322 Sum_probs=211.1
Q ss_pred ceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEE
Q 024676 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLW 88 (264)
Q Consensus 9 ~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iw 88 (264)
...+.||.++|.+++|+| ++++|++|+.|++|++||..+++.+..+..|...|.+++|+|++.++++|+.|+.+++|
T Consensus 48 ~~~l~gH~~~v~~~~~s~---d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw 124 (340)
T 1got_B 48 RRTLRGHLAKIYAMHWGT---DSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124 (340)
T ss_dssp EEEECCCSSCEEEEEECT---TSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred heeecCCCCceEEEEECC---CCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 345689999999999996 89999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCc----EEEE-eecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEE
Q 024676 89 DALTGD----EKHS-FEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (264)
Q Consensus 89 d~~~~~----~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 163 (264)
|+.++. .... ..|...|.++.|++++. +++++.|++|++||+++++.. ..+..|.+.+.+++|+|++. ++++
T Consensus 125 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~-~~~~~h~~~v~~~~~~~~~~-~l~s 201 (340)
T 1got_B 125 NLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQT-TTFTGHTGDVMSLSLAPDTR-LFVS 201 (340)
T ss_dssp ETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEE-EEECCCSSCEEEEEECTTSS-EEEE
T ss_pred ECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEE-EEEcCCCCceEEEEECCCCC-EEEE
Confidence 998753 2222 24888999999998875 889999999999999876543 34456788999999998654 6777
Q ss_pred eeCCCeEEEEECCCCceeEEecC-CCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEecCC---CCceeeEcCC
Q 024676 164 CTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPC---NTESASLEPK 238 (264)
Q Consensus 164 ~~~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~ 238 (264)
++.|+.|++||+++++++..+.. ..+|.+++|+|++.++++ +.|+.|++||+++.+.+..+.... ...++.++|
T Consensus 202 g~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~- 280 (340)
T 1got_B 202 GACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK- 280 (340)
T ss_dssp EETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT-
T ss_pred EeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECC-
Confidence 88889999999999998888864 567999999999987765 568999999999988877775432 345667777
Q ss_pred CCCEEEEecCCCeEEEEEcCcceee
Q 024676 239 LGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 239 ~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
.+.+|++|+.|+.|++||+.+++.+
T Consensus 281 ~g~~l~~g~~d~~i~vwd~~~~~~~ 305 (340)
T 1got_B 281 SGRLLLAGYDDFNCNVWDALKADRA 305 (340)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCEEEEECCCCeEEEEEcccCcEe
Confidence 5899999999999999999877653
No 13
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.6e-39 Score=271.15 Aligned_cols=250 Identities=20% Similarity=0.268 Sum_probs=212.4
Q ss_pred ceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEE
Q 024676 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLW 88 (264)
Q Consensus 9 ~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iw 88 (264)
...+.||..+|.+|+|+| ++++|++|+.|++|++||..+++....+..|...|.+++|+|++.++++|+.|+.+++|
T Consensus 57 ~~~l~gH~~~V~~~~~s~---d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~ 133 (354)
T 2pbi_B 57 RRTLKGHGNKVLCMDWCK---DKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVY 133 (354)
T ss_dssp EEEEECCSSCEEEEEECT---TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEE
T ss_pred EEEecCCCCeEEEEEECC---CCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEE
Confidence 455689999999999996 89999999999999999999999888999999999999999999999999999999999
Q ss_pred eCCCCc-------EEEEeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecC-CCeE
Q 024676 89 DALTGD-------EKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHS-DQTI 160 (264)
Q Consensus 89 d~~~~~-------~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~ 160 (264)
++.... ......|...|..+.|+|+++.|++++.|++|++||+++++.. ..+..|...+.++++.+. ++.+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~-~~~~~h~~~v~~~~~~~~~~g~~ 212 (354)
T 2pbi_B 134 PLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLL-QSFHGHGADVLCLDLAPSETGNT 212 (354)
T ss_dssp ECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE-EEEECCSSCEEEEEECCCSSCCE
T ss_pred EEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEE-EEEcCCCCCeEEEEEEeCCCCCE
Confidence 986431 2223358889999999999999999999999999999877643 344567888999998875 3467
Q ss_pred EEEeeCCCeEEEEECCCCceeEEecC-CCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEecCC---CCceeeE
Q 024676 161 LSSCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPC---NTESASL 235 (264)
Q Consensus 161 ~~~~~~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~---~~~~~~~ 235 (264)
+++++.|++|++||+++++++..+.. ..+|++++|+|++.++++ +.|++|++||++..+.+..+.... ....+.+
T Consensus 213 l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (354)
T 2pbi_B 213 FVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDF 292 (354)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEE
Confidence 88888999999999999999888864 567999999999987765 568999999999988777665432 2345667
Q ss_pred cCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 236 EPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 236 ~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
.+ .+.+|++|+.|+.|++||+.+|+.+
T Consensus 293 s~-~g~~l~~g~~d~~i~vwd~~~~~~~ 319 (354)
T 2pbi_B 293 SL-SGRLLFAGYNDYTINVWDVLKGSRV 319 (354)
T ss_dssp CT-TSSEEEEEETTSCEEEEETTTCSEE
T ss_pred eC-CCCEEEEEECCCcEEEEECCCCceE
Confidence 76 5899999999999999999888754
No 14
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.2e-39 Score=272.77 Aligned_cols=245 Identities=18% Similarity=0.249 Sum_probs=201.9
Q ss_pred eEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEe
Q 024676 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (264)
Q Consensus 10 ~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd 89 (264)
..+.+|..+|.+++|+| ++++|++|+.|++|++||+.+++.+..+.+|.+.|.+++|+|++.++++++.|++|++||
T Consensus 70 ~~l~~h~~~V~~~~~~~---~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd 146 (343)
T 2xzm_R 70 KALTGHNHFVSDLALSQ---ENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWN 146 (343)
T ss_dssp EEECCCSSCEEEEEECS---STTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEE
T ss_pred chhccCCCceEEEEECC---CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEe
Confidence 45679999999999996 889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEe---ecCCeEEEEEECCCC----------CEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecC
Q 024676 90 ALTGDEKHSF---EHKHIVRACAFSEDT----------HLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHS 156 (264)
Q Consensus 90 ~~~~~~~~~~---~~~~~v~~~~~~~~~----------~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~ 156 (264)
+......... .|...|.+++|+|++ .++++++.|+.|++||.+. + .......|...+.+++|+|+
T Consensus 147 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~-~~~~~~~h~~~v~~~~~s~~ 224 (343)
T 2xzm_R 147 ILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF-Q-IRYTFKAHESNVNHLSISPN 224 (343)
T ss_dssp SSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT-E-EEEEEECCSSCEEEEEECTT
T ss_pred ccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC-c-eeEEEcCccccceEEEECCC
Confidence 9744332222 477789999999986 7899999999999999532 2 22344567889999999986
Q ss_pred CCeEEEEeeCCCeEEEEECC-CCceeEEecCCCCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeee--EEe--------
Q 024676 157 DQTILSSCTDSGGVRLWDAR-SGKIVQTLETKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVK--GYN-------- 225 (264)
Q Consensus 157 ~~~~~~~~~~d~~v~iwd~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~--~~~-------- 225 (264)
+. ++++++.|+.|++||++ .......+.....+.+++|+|++.+++++.++.|++||+.+.+... .+.
T Consensus 225 g~-~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~ 303 (343)
T 2xzm_R 225 GK-YIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAE 303 (343)
T ss_dssp SS-EEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBT
T ss_pred CC-EEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhh
Confidence 55 56777888999999994 4445555656667999999999999988888899999998766544 222
Q ss_pred ---cC-CCCceeeEcCCCCCEEEEecCCCeEEEEEcCcce
Q 024676 226 ---MP-CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 226 ---~~-~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~ 261 (264)
.+ ....+++++| ++.+|++|+.|+.|++|++.+|+
T Consensus 304 ~~~~~~~~v~~~~~sp-~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 304 GQKGKNPQCTSLAWNA-LGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp TBCCSCCCEEEEEECS-SSCCEEEEETTSEEEEEEEEEEE
T ss_pred hhcCCCCceEEEEECC-CCCeEEEecCCceEEEEEEEccC
Confidence 11 1234567877 58899999999999999998876
No 15
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=8.6e-40 Score=275.29 Aligned_cols=244 Identities=17% Similarity=0.204 Sum_probs=200.5
Q ss_pred eeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceE----EeeeCCcCCEEEEEECCCCcEEEEecCCCeEEE
Q 024676 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWI----GTFEGHKGAVWSCCLDANALFSASGSADFTAKL 87 (264)
Q Consensus 12 ~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~----~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~i 87 (264)
..+|...|.+|+|+| ++++ ++++.|++|++||+.+++.. ....+|.+.|.+++|+|++.++++|+.|++|++
T Consensus 90 ~~~~~~~V~~~~~s~---d~~~-l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~i 165 (357)
T 4g56_B 90 GVQTEAGVTDVAWVS---EKGI-LVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKV 165 (357)
T ss_dssp EEECSSCEEEEEEET---TTEE-EEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred cCCCCCCEEEEEEcC---CCCE-EEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence 357999999999996 6654 57889999999999887643 234589999999999999999999999999999
Q ss_pred EeCCCCcEEEEee-cCCeEEEEEECCCCC-EEEEeeCCCcEEEeeCCCCCCCCeE-eccCCCCeEEEEEecCCCeEEEEe
Q 024676 88 WDALTGDEKHSFE-HKHIVRACAFSEDTH-LLLTGGFEKILRIFDLNRPDAPPRE-VGNSSGSIRTVAWLHSDQTILSSC 164 (264)
Q Consensus 88 wd~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~s~~~d~~i~~~d~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~ 164 (264)
||+.+++.+..+. |...|++++|+|++. ++++++.|+.|++||+++++..... ...+...+.+++|+|+++.+++++
T Consensus 166 wd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g 245 (357)
T 4g56_B 166 WDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACG 245 (357)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEE
T ss_pred EECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEe
Confidence 9999998888775 788999999999874 7889999999999999877654332 334567789999999888889999
Q ss_pred eCCCeEEEEECCCCceeEEecC-CCCEEEEEEcCCC-cEEE-EeCCCcEEEEECCCceeeeEEecCCCCceeeEcCCCCC
Q 024676 165 TDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDG-RYIT-TADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGN 241 (264)
Q Consensus 165 ~~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~s~~~-~~l~-~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (264)
+.|+.|++||+++++++..+.. ..+|.+++|+|++ ++|+ ++.|++|+|||++++++++.+........++|+|.++.
T Consensus 246 ~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~ 325 (357)
T 4g56_B 246 DETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHS 325 (357)
T ss_dssp ESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTT
T ss_pred ecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCC
Confidence 9999999999999998888864 4679999999987 5565 46789999999999988876655555667788886789
Q ss_pred EEEEecCCCeEEEEEcCc
Q 024676 242 IFIAGGEDMWVHVFDFHT 259 (264)
Q Consensus 242 ~~~~gs~d~~v~vwd~~~ 259 (264)
+|++||.|++|++||+.+
T Consensus 326 ~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 326 KFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp EEEEEETTSCEEEEECC-
T ss_pred EEEEEcCCCeEEEEECCC
Confidence 999999999999999864
No 16
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.9e-39 Score=266.31 Aligned_cols=245 Identities=18% Similarity=0.261 Sum_probs=197.3
Q ss_pred eEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCC--ceEEeeeCCcCCEEEEEECCC--CcEEEEecCCCeE
Q 024676 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG--DWIGTFEGHKGAVWSCCLDAN--ALFSASGSADFTA 85 (264)
Q Consensus 10 ~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~--~~~~~~~~H~~~V~~v~~~~~--~~~l~s~s~D~~v 85 (264)
.++.+|.++|.+++|+| +|++||+|+.|++|++|+..++ +.+.++.+|.++|.+++|+++ +.+|+||+.|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~---~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v 79 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDY---YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (297)
T ss_dssp EECCSCSSCEEEEEECT---TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEE
T ss_pred eeccCCcCceEEEEECC---CCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEE
Confidence 34679999999999996 8999999999999999998753 567899999999999999864 8899999999999
Q ss_pred EEEeCCCCc--EEEEe-ecCCeEEEEEECCC--CCEEEEeeCCCcEEEeeCCCCCC-CCeEeccCCCCeEEEEEecCC--
Q 024676 86 KLWDALTGD--EKHSF-EHKHIVRACAFSED--THLLLTGGFEKILRIFDLNRPDA-PPREVGNSSGSIRTVAWLHSD-- 157 (264)
Q Consensus 86 ~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~--~~~l~s~~~d~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~~~~~~-- 157 (264)
++||+.++. .+..+ .|...|.+++|+|+ +++|++++.|+.|++||++.+.. .......|...+.+++|+|..
T Consensus 80 ~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 159 (297)
T 2pm7_B 80 MIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (297)
T ss_dssp EEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC--
T ss_pred EEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccc
Confidence 999998764 33333 37889999999997 88999999999999999976532 234455678899999999853
Q ss_pred ----------CeEEEEeeCCCeEEEEECCCCc----eeEEec-CCCCEEEEEEcCCC---cEEEE-eCCCcEEEEECCCc
Q 024676 158 ----------QTILSSCTDSGGVRLWDARSGK----IVQTLE-TKSPVTSAEVSRDG---RYITT-ADGSSVKFWDANHF 218 (264)
Q Consensus 158 ----------~~~~~~~~~d~~v~iwd~~~~~----~~~~~~-~~~~v~~~~~s~~~---~~l~~-~~~~~i~iwd~~~~ 218 (264)
..++++++.|++|++||+++++ ....+. +...|.+++|+|++ .+|++ +.|++|++||++..
T Consensus 160 ~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp ----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred ccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 3578888999999999998876 444555 45679999999985 66654 67899999999764
Q ss_pred ee---eeEE---ecCCCCceeeEcCCCCCEEEEecCCCeEEEEEcC
Q 024676 219 GL---VKGY---NMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFH 258 (264)
Q Consensus 219 ~~---~~~~---~~~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~ 258 (264)
.. ...+ ........++|+| ++.+|++++.|+.|++|+..
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 240 QGPWKKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp TSCCEEEESSSSCCSSCEEEEEECS-SSCCEEEEETTSCEEEEEEC
T ss_pred CCccceeeeecccCCCcEEEEEECC-CCCEEEEEcCCCcEEEEEEC
Confidence 21 1122 1123344667777 58899999999999999976
No 17
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1e-38 Score=265.16 Aligned_cols=247 Identities=24% Similarity=0.372 Sum_probs=198.7
Q ss_pred EeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCc-----eEEeeeCCcCCEEEEEECCCCcEEEEecCCCeE
Q 024676 11 VCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD-----WIGTFEGHKGAVWSCCLDANALFSASGSADFTA 85 (264)
Q Consensus 11 ~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~-----~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v 85 (264)
.+.||+++|++|+|+|. ++++|+|||.|++|++||+.+++ ..+.+.+|.+.|.+++|+|++.++++|+.|+.|
T Consensus 33 tL~GH~~~V~~v~~sp~--~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i 110 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQ--FPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 110 (340)
T ss_dssp EECCCSSCEEEEEECTT--CTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EECCccCCEEEEEEeCC--CCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccc
Confidence 46899999999999972 36899999999999999987653 456789999999999999999999999999999
Q ss_pred EEEeCCCCcEEEEee--------------------------------------------cCCeEEEEEECCC--CCEEEE
Q 024676 86 KLWDALTGDEKHSFE--------------------------------------------HKHIVRACAFSED--THLLLT 119 (264)
Q Consensus 86 ~iwd~~~~~~~~~~~--------------------------------------------~~~~v~~~~~~~~--~~~l~s 119 (264)
++|+........... |...+..++++++ ..++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s 190 (340)
T 4aow_A 111 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 190 (340)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEE
T ss_pred eEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEE
Confidence 999986654322111 3445667777664 356777
Q ss_pred eeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEecCCCCEEEEEEcCCC
Q 024676 120 GGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDG 199 (264)
Q Consensus 120 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~ 199 (264)
++.|+.|++||+++++.. .....|.+.+.+++|+|++. ++++++.|+.|++||+++.+++..+..+..+.++.++|++
T Consensus 191 ~~~d~~i~i~d~~~~~~~-~~~~~h~~~v~~~~~s~~~~-~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~ 268 (340)
T 4aow_A 191 CGWDKLVKVWNLANCKLK-TNHIGHTGYLNTVTVSPDGS-LCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNR 268 (340)
T ss_dssp EETTSCEEEEETTTTEEE-EEECCCSSCEEEEEECTTSS-EEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSS
T ss_pred EcCCCEEEEEECCCCcee-eEecCCCCcEEEEEECCCCC-EEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCC
Confidence 888888888888765432 33445778999999988654 6777788899999999999999999888899999999999
Q ss_pred cEEEEeCCCcEEEEECCCceeeeEEec----------CCCCceeeEcCCCCCEEEEecCCCeEEEEEcCccee
Q 024676 200 RYITTADGSSVKFWDANHFGLVKGYNM----------PCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (264)
Q Consensus 200 ~~l~~~~~~~i~iwd~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~ 262 (264)
.+++++.|+.|++||+++...+..+.. ......+++.| ++++|++||.|+.|++||+++|.+
T Consensus 269 ~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~-dg~~l~sgs~Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 269 YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSA-DGQTLFAGYTDNLVRVWQVTIGTR 340 (340)
T ss_dssp SEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECT-TSSEEEEEETTSCEEEEEEEC---
T ss_pred ceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEeCCCcCC
Confidence 999998899999999998877766542 12234567777 589999999999999999999964
No 18
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=272.34 Aligned_cols=245 Identities=16% Similarity=0.170 Sum_probs=197.6
Q ss_pred eccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCC-----------ceEEeeeCCcCCEEEEEECCCCcEEEEecC
Q 024676 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG-----------DWIGTFEGHKGAVWSCCLDANALFSASGSA 81 (264)
Q Consensus 13 ~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~-----------~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~ 81 (264)
..|...|.+++|+| ||++|++++ |+++++||.... ........|+..|.+++|++++ .+++|+.
T Consensus 27 ~~~~~~v~~~~fs~---dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~ 101 (344)
T 4gqb_B 27 ACMERQLEAARYRS---DGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASD 101 (344)
T ss_dssp SSCCSEEEEEEECT---TSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEET
T ss_pred ccccCCEEEEEECC---CCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEEC
Confidence 35778899999996 999999888 888888874211 1111223367889999999986 5679999
Q ss_pred CCeEEEEeCCCCcEEEEe-----ecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecC
Q 024676 82 DFTAKLWDALTGDEKHSF-----EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHS 156 (264)
Q Consensus 82 D~~v~iwd~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~ 156 (264)
||+|+|||+.+++..... .|...|++++|+|++++|++|+.|++|++||+++++.. ..+..|.+.+.+++|+++
T Consensus 102 dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~-~~~~~h~~~V~~~~~~~~ 180 (344)
T 4gqb_B 102 SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVL-SSYRAHAAQVTCVAASPH 180 (344)
T ss_dssp TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE-EEECCCSSCEEEEEECSS
T ss_pred CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE-EEEcCcCCceEEEEecCC
Confidence 999999999988644332 48889999999999999999999999999999876543 445568899999999998
Q ss_pred CCeEEEEeeCCCeEEEEECCCCceeEEecC---CCCEEEEEEcCCC-cEEEE-eCCCcEEEEECCCceeeeEEecCCC-C
Q 024676 157 DQTILSSCTDSGGVRLWDARSGKIVQTLET---KSPVTSAEVSRDG-RYITT-ADGSSVKFWDANHFGLVKGYNMPCN-T 230 (264)
Q Consensus 157 ~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~---~~~v~~~~~s~~~-~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~~-~ 230 (264)
+..++++++.|++|++||++++++...+.. ...+.+++++|++ +++++ +.|+.|++||+++++++..+..+.. .
T Consensus 181 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v 260 (344)
T 4gqb_B 181 KDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCV 260 (344)
T ss_dssp CTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCE
T ss_pred CCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCE
Confidence 888889999999999999999998877643 3468999999964 66654 5689999999999999998887554 4
Q ss_pred ceeeEcCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 231 ESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 231 ~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
..+.|+|+...+|++||.|++|++||+.+++.+
T Consensus 261 ~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~ 293 (344)
T 4gqb_B 261 TGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF 293 (344)
T ss_dssp EEEEECSSSSCCEEEEETTSCEEEECTTCCEEE
T ss_pred EEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE
Confidence 567788865578999999999999999988753
No 19
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.9e-38 Score=265.17 Aligned_cols=241 Identities=20% Similarity=0.318 Sum_probs=205.8
Q ss_pred ceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCc----eEEeeeCCcCCEEEEEECCCCcEEEEecCCCe
Q 024676 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD----WIGTFEGHKGAVWSCCLDANALFSASGSADFT 84 (264)
Q Consensus 9 ~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~----~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~ 84 (264)
...+.+|...|.+++|+| +|++|++|+.|+.+++|++.+++ ....+.+|.+.|.++.|++++. +++++.|++
T Consensus 90 ~~~~~~~~~~v~~~~~s~---~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~ 165 (340)
T 1got_B 90 VHAIPLRSSWVMTCAYAP---SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTT 165 (340)
T ss_dssp EEEEECSSSCEEEEEECT---TSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSC
T ss_pred ceEeecCCccEEEEEECC---CCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCc
Confidence 344568999999999996 89999999999999999998753 4567889999999999998876 789999999
Q ss_pred EEEEeCCCCcEEEEee-cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEE
Q 024676 85 AKLWDALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (264)
Q Consensus 85 v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 163 (264)
|++||+.++.....+. |...|.+++|+|+++++++|+.|+.|++||++++... ..+..|...+.+++|+|++. ++++
T Consensus 166 i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~-~~~~~h~~~v~~v~~~p~~~-~l~s 243 (340)
T 1got_B 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCR-QTFTGHESDINAICFFPNGN-AFAT 243 (340)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEE-EEECCCSSCEEEEEECTTSS-EEEE
T ss_pred EEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeE-EEEcCCcCCEEEEEEcCCCC-EEEE
Confidence 9999999998887775 8889999999999999999999999999999876532 44556788999999998654 6677
Q ss_pred eeCCCeEEEEECCCCceeEEecCC---CCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEecCCC-CceeeEcCC
Q 024676 164 CTDSGGVRLWDARSGKIVQTLETK---SPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCN-TESASLEPK 238 (264)
Q Consensus 164 ~~~d~~v~iwd~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~ 238 (264)
++.|++|++||+++++.+..+.+. ..+.+++|+|+++++++ +.|+.|++||+.+.+.+..+..+.. ...+.+.|
T Consensus 244 ~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~- 322 (340)
T 1got_B 244 GSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTD- 322 (340)
T ss_dssp EETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT-
T ss_pred EcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcC-
Confidence 888899999999999887777543 36999999999988765 5689999999999988888876554 44566776
Q ss_pred CCCEEEEecCCCeEEEEE
Q 024676 239 LGNIFIAGGEDMWVHVFD 256 (264)
Q Consensus 239 ~~~~~~~gs~d~~v~vwd 256 (264)
++.+|++||.|+.|++||
T Consensus 323 dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 323 DGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TSSCEEEEETTSCEEEEC
T ss_pred CCCEEEEEcCCccEEecC
Confidence 589999999999999996
No 20
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.1e-38 Score=265.16 Aligned_cols=252 Identities=23% Similarity=0.308 Sum_probs=200.4
Q ss_pred ecceEeeccCCCeeeeEecc--CC-CCCeEEEEEeCCCCcEEEeCCCC-------ceEEeeeCCcCCEEEEEECCCCcEE
Q 024676 7 AVPLVCHGHSRPVVDLFYSP--IT-PDGFFLVSASKDSSPMLRNGETG-------DWIGTFEGHKGAVWSCCLDANALFS 76 (264)
Q Consensus 7 ~~~~~~~~h~~~v~~~~~~~--~~-~~g~~l~t~s~d~~v~i~~~~~~-------~~~~~~~~H~~~V~~v~~~~~~~~l 76 (264)
....++.||+++|.+|+|.+ .+ +++++|++|+.|++|++|++.+. .....+.+|.+.|.+++|+|++.++
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l 91 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA 91 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE
Confidence 34456689999999999922 12 38999999999999999998653 3456789999999999999999999
Q ss_pred EEecCCCeEEEEeCCCCcEEEEee-cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeE--eccCCCCeEEEEE
Q 024676 77 ASGSADFTAKLWDALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPRE--VGNSSGSIRTVAW 153 (264)
Q Consensus 77 ~s~s~D~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~--~~~~~~~i~~~~~ 153 (264)
+||+.|++|++||+.+++.+..+. |..+|.+++|+|++++|++++.|++|++||+.... .... ...+...+.+++|
T Consensus 92 ~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~v~~~~~ 170 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-KFSSAEKENHSDWVSCVRY 170 (343)
T ss_dssp EEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-EEECCTTTSCSSCEEEEEE
T ss_pred EEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-eeeeecccCCCceeeeeee
Confidence 999999999999999998877765 88999999999999999999999999999986321 1111 1246678999999
Q ss_pred ecCCC---------eEEEEeeCCCeEEEEECCCCceeEEec-CCCCEEEEEEcCCCcEEEE-eCCCcEEEEECCC-ceee
Q 024676 154 LHSDQ---------TILSSCTDSGGVRLWDARSGKIVQTLE-TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANH-FGLV 221 (264)
Q Consensus 154 ~~~~~---------~~~~~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~-~~~~ 221 (264)
.|.+. .++++++.|+.|++||. +.+....+. +..+|.+++|+|+|++|++ +.|+.|++||++. ....
T Consensus 171 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~ 249 (343)
T 2xzm_R 171 SPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQ 249 (343)
T ss_dssp CCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCS
T ss_pred ccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccc
Confidence 88652 46788888999999994 455555554 5567999999999988765 5689999999954 3445
Q ss_pred eEEecCCCCceeeEcCCCCCEEEEecCCCeEEEEEcCccee
Q 024676 222 KGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (264)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~ 262 (264)
..+........++++|+ +.+++ ++.|+.|++||+.+++.
T Consensus 250 ~~~~~~~~v~~v~~sp~-~~~la-~~~d~~v~iw~~~~~~~ 288 (343)
T 2xzm_R 250 REFDAGSTINQIAFNPK-LQWVA-VGTDQGVKIFNLMTQSK 288 (343)
T ss_dssp EEEECSSCEEEEEECSS-SCEEE-EEESSCEEEEESSSCCS
T ss_pred eeecCCCcEEEEEECCC-CCEEE-EECCCCEEEEEeCCCCC
Confidence 55555555667788874 66665 55688899999887653
No 21
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.3e-39 Score=266.09 Aligned_cols=243 Identities=16% Similarity=0.238 Sum_probs=187.0
Q ss_pred ccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCC-------CceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEE
Q 024676 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET-------GDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAK 86 (264)
Q Consensus 14 ~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~-------~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~ 86 (264)
+|..+|.+|+|+| ++++|++|+.|++|++|+... .+.+..+.+|.+.|.+++|+|++.+|++|+.|++|+
T Consensus 56 ~h~~~v~~v~~sp---~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~ 132 (330)
T 2hes_X 56 AHKKAIRSVAWRP---HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVW 132 (330)
T ss_dssp CCCSCEEEEEECT---TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEE
T ss_pred CccCCEEEEEECC---CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEE
Confidence 3999999999996 889999999999999999853 345678899999999999999999999999999999
Q ss_pred EEeCCCC----cEEEEe-ecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCC-CCeEeccCCCCeEEEEEecCC-Ce
Q 024676 87 LWDALTG----DEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDA-PPREVGNSSGSIRTVAWLHSD-QT 159 (264)
Q Consensus 87 iwd~~~~----~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~~~~~~-~~ 159 (264)
+||+... +.+..+ .|...|.+++|+|++++|++++.|++|++||++.+.. ....+..|.+.+.+++|.|++ ..
T Consensus 133 iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 212 (330)
T 2hes_X 133 IWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVF 212 (330)
T ss_dssp EEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSC
T ss_pred EEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCee
Confidence 9999432 234444 4888999999999999999999999999999865421 223455688899999998864 45
Q ss_pred EEEEeeCCCeEEEEECCCC--------ceeEEec--CCCCEEEEEEcCCCcEEEEeCCCcEEEEECCCce--eeeEE-ec
Q 024676 160 ILSSCTDSGGVRLWDARSG--------KIVQTLE--TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFG--LVKGY-NM 226 (264)
Q Consensus 160 ~~~~~~~d~~v~iwd~~~~--------~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~--~~~~~-~~ 226 (264)
.+++++.|++|++||++++ .+...+. +..+|.+++|++++.+++++.|+.|++||...++ .+... ..
T Consensus 213 ~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~ 292 (330)
T 2hes_X 213 RLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRALC 292 (330)
T ss_dssp EEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEESCT
T ss_pred EEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEeccccc
Confidence 6888899999999999765 3334443 4567999999998877788889999999987763 23222 22
Q ss_pred CC--CCceeeEcCC-CCCEEEEecCCCeEEEEEcCc
Q 024676 227 PC--NTESASLEPK-LGNIFIAGGEDMWVHVFDFHT 259 (264)
Q Consensus 227 ~~--~~~~~~~~~~-~~~~~~~gs~d~~v~vwd~~~ 259 (264)
+. ....+.+.|. ++.+|++||.|+.|++||+.+
T Consensus 293 h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 293 HGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred cccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 22 3445667763 478999999999999999864
No 22
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.2e-38 Score=268.84 Aligned_cols=244 Identities=20% Similarity=0.345 Sum_probs=198.8
Q ss_pred eccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcC------------------CEEEEEECCCCc
Q 024676 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKG------------------AVWSCCLDANAL 74 (264)
Q Consensus 13 ~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~------------------~V~~v~~~~~~~ 74 (264)
.+|...|.+++|+| ||++||+|+ |+.+++|+..+++.+..+.+|.. .|.+++|+|++.
T Consensus 61 ~~h~~~V~~v~fsp---dg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~ 136 (393)
T 1erj_A 61 LDHTSVVCCVKFSN---DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGK 136 (393)
T ss_dssp EECSSCCCEEEECT---TSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSS
T ss_pred cCCCCEEEEEEECC---CCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCC
Confidence 37999999999996 999999977 78999999999998888876643 389999999999
Q ss_pred EEEEecCCCeEEEEeCCCCcEEEEee-cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEE
Q 024676 75 FSASGSADFTAKLWDALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAW 153 (264)
Q Consensus 75 ~l~s~s~D~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~ 153 (264)
++++|+.|++|++||+.+++....+. |...|.+++|+|++++|++++.|+++++||+++++.... ..+...+.++++
T Consensus 137 ~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~--~~~~~~v~~~~~ 214 (393)
T 1erj_A 137 FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLT--LSIEDGVTTVAV 214 (393)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE--EECSSCEEEEEE
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEE--EEcCCCcEEEEE
Confidence 99999999999999999988777765 888999999999999999999999999999987653222 234567899999
Q ss_pred ecCCCeEEEEeeCCCeEEEEECCCCceeEEe--------cCCCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCce-----
Q 024676 154 LHSDQTILSSCTDSGGVRLWDARSGKIVQTL--------ETKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFG----- 219 (264)
Q Consensus 154 ~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~--------~~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~----- 219 (264)
+|.++.++++++.|+.|++||+++++.+..+ .+...|.+++|+|+++++++ +.|+.|++||+++..
T Consensus 215 ~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~ 294 (393)
T 1erj_A 215 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDS 294 (393)
T ss_dssp CSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccc
Confidence 9867778888899999999999999877665 23467999999999988765 568999999997642
Q ss_pred -------eeeEEecCCC-CceeeEcCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 220 -------LVKGYNMPCN-TESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 220 -------~~~~~~~~~~-~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
+...+..+.. ...+.+.+ .+.+|++||.|+.|++||+.+|+.+
T Consensus 295 ~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~iwd~~~~~~~ 345 (393)
T 1erj_A 295 KTPNSGTCEVTYIGHKDFVLSVATTQ-NDEYILSGSKDRGVLFWDKKSGNPL 345 (393)
T ss_dssp ------CEEEEEECCSSCEEEEEECG-GGCEEEEEETTSEEEEEETTTCCEE
T ss_pred cCCCCCcceEEEecccCcEEEEEECC-CCCEEEEEeCCCeEEEEECCCCeEE
Confidence 2334433333 34556666 5889999999999999999988764
No 23
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.5e-39 Score=273.77 Aligned_cols=246 Identities=18% Similarity=0.222 Sum_probs=196.2
Q ss_pred eccCCCeeeeEeccCCCCCeEEEEEeC------CCCcEEEeCCCCceE----EeeeCCcCCEEEEEECCCCcEEEEecCC
Q 024676 13 HGHSRPVVDLFYSPITPDGFFLVSASK------DSSPMLRNGETGDWI----GTFEGHKGAVWSCCLDANALFSASGSAD 82 (264)
Q Consensus 13 ~~h~~~v~~~~~~~~~~~g~~l~t~s~------d~~v~i~~~~~~~~~----~~~~~H~~~V~~v~~~~~~~~l~s~s~D 82 (264)
.+|++.|.+|+|+| ||++||+||. |+.+++|+..++... ....+|.+.|.+++|+|++.++ +++.|
T Consensus 39 ~~H~~~V~~v~fSp---DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~s~d 114 (357)
T 4g56_B 39 ACMEVQIGAVRYRR---DGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGIL-VASDS 114 (357)
T ss_dssp -CCCSEEEEEEECS---SSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEE-EEETT
T ss_pred ccccCCEEEEEECC---CCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEE-EEECC
Confidence 57999999999996 9999999998 677899988777543 3345699999999999998655 57789
Q ss_pred CeEEEEeCCCCcEEE-----EeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCC
Q 024676 83 FTAKLWDALTGDEKH-----SFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSD 157 (264)
Q Consensus 83 ~~v~iwd~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~ 157 (264)
++|+|||+.+++... ...|..+|++++|+|++++|++|+.|+.|++||+++++.. ..+..|...+.+++|++++
T Consensus 115 g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~-~~~~~h~~~v~~v~~s~~~ 193 (357)
T 4g56_B 115 GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVL-KSYNAHSSEVNCVAACPGK 193 (357)
T ss_dssp SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEE-EEECCCSSCEEEEEECTTC
T ss_pred CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEE-EEEcCCCCCEEEEEEccCC
Confidence 999999998875432 2358889999999999999999999999999999876543 3445678899999999888
Q ss_pred CeEEEEeeCCCeEEEEECCCCceeEEec---CCCCEEEEEEcCCC-cEEEE-eCCCcEEEEECCCceeeeEEecCCC-Cc
Q 024676 158 QTILSSCTDSGGVRLWDARSGKIVQTLE---TKSPVTSAEVSRDG-RYITT-ADGSSVKFWDANHFGLVKGYNMPCN-TE 231 (264)
Q Consensus 158 ~~~~~~~~~d~~v~iwd~~~~~~~~~~~---~~~~v~~~~~s~~~-~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~~-~~ 231 (264)
..++++++.|++|++||++++++...+. ....+.+++|+|++ .++++ +.++.|++||+++.+.++.+..+.. ..
T Consensus 194 ~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~ 273 (357)
T 4g56_B 194 DTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNIT 273 (357)
T ss_dssp SSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEE
T ss_pred CceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEE
Confidence 7788888899999999999998765543 34569999999985 56655 5689999999999998888876544 45
Q ss_pred eeeEcCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 232 SASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 232 ~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
.+++.|+.+.+|++||.|++|+|||+.+++.+
T Consensus 274 ~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~ 305 (357)
T 4g56_B 274 GLAYSYHSSPFLASISEDCTVAVLDADFSEVF 305 (357)
T ss_dssp EEEECSSSSCCEEEEETTSCEEEECTTSCEEE
T ss_pred EEEEcCCCCCEEEEEeCCCEEEEEECCCCcEe
Confidence 67788876688999999999999999988764
No 24
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.7e-38 Score=263.99 Aligned_cols=206 Identities=22% Similarity=0.360 Sum_probs=170.4
Q ss_pred eecceEeeccCC-CeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEE---eeeCCcCCEEEEEECCCCcEEEEecC
Q 024676 6 VAVPLVCHGHSR-PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIG---TFEGHKGAVWSCCLDANALFSASGSA 81 (264)
Q Consensus 6 ~~~~~~~~~h~~-~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~---~~~~H~~~V~~v~~~~~~~~l~s~s~ 81 (264)
+.....+.+|.. +|++|+|+| +|++||+|+.|++|++|+..+++... ...+|.+.|.+++|+|++.+|++|+.
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp---~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~ 81 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNP---AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF 81 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECT---TSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEeeeecCCCCCcEEEEEECC---CCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEEC
Confidence 344556679998 999999996 89999999999999999998876432 23689999999999999999999999
Q ss_pred CCeEEEEeCCCCc--EEEEe-ecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCC--CeEeccCCCCeEEEEEecC
Q 024676 82 DFTAKLWDALTGD--EKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAP--PREVGNSSGSIRTVAWLHS 156 (264)
Q Consensus 82 D~~v~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~--~~~~~~~~~~i~~~~~~~~ 156 (264)
|+++++||..++. ....+ .|..+|.+++|+|++++|++|+.|+.|++||++.+... ......|...+.+++|+|+
T Consensus 82 D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 161 (345)
T 3fm0_A 82 DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPS 161 (345)
T ss_dssp TSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSS
T ss_pred CCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCC
Confidence 9999999988764 34444 48889999999999999999999999999999765432 2334567888999999987
Q ss_pred CCeEEEEeeCCCeEEEEECCCCce--eEEec-CCCCEEEEEEcCCCcEEEE-eCCCcEEEEEC
Q 024676 157 DQTILSSCTDSGGVRLWDARSGKI--VQTLE-TKSPVTSAEVSRDGRYITT-ADGSSVKFWDA 215 (264)
Q Consensus 157 ~~~~~~~~~~d~~v~iwd~~~~~~--~~~~~-~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~ 215 (264)
+. ++++++.|+.|++||.++++. ...+. +...|.+++|+|++++|++ +.|++|++||.
T Consensus 162 ~~-~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 162 QE-LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp SS-CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred CC-EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 65 566778889999999988753 34554 4567999999999988765 56899999985
No 25
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=7.3e-38 Score=266.64 Aligned_cols=241 Identities=21% Similarity=0.295 Sum_probs=199.6
Q ss_pred CCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEE
Q 024676 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEK 96 (264)
Q Consensus 17 ~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~ 96 (264)
..|.+++|+| +|++|++|+.|+.|++||..+++.+..+.+|.+.|.+++|+|++.++++++.|++|++||+.+++..
T Consensus 124 ~~v~~v~~s~---dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 124 LYIRSVCFSP---DGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS 200 (393)
T ss_dssp CBEEEEEECT---TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred eeEEEEEECC---CCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeE
Confidence 3589999996 8999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred EEeecCCeEEEEEECC-CCCEEEEeeCCCcEEEeeCCCCCCCCeE------eccCCCCeEEEEEecCCCeEEEEeeCCCe
Q 024676 97 HSFEHKHIVRACAFSE-DTHLLLTGGFEKILRIFDLNRPDAPPRE------VGNSSGSIRTVAWLHSDQTILSSCTDSGG 169 (264)
Q Consensus 97 ~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~~~d~~~~~~~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~d~~ 169 (264)
..+.+...+..++++| +++++++|+.|+.|++||+++++..... ...|...+.+++|++++. ++++++.|+.
T Consensus 201 ~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~d~~ 279 (393)
T 1erj_A 201 LTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQ-SVVSGSLDRS 279 (393)
T ss_dssp EEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSS-EEEEEETTSE
T ss_pred EEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCC-EEEEEeCCCE
Confidence 8888888999999999 8999999999999999999876532221 134678899999998665 5667788899
Q ss_pred EEEEECCCCc------------eeEEec-CCCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEecCCC-Cceee
Q 024676 170 VRLWDARSGK------------IVQTLE-TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCN-TESAS 234 (264)
Q Consensus 170 v~iwd~~~~~------------~~~~~~-~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~~-~~~~~ 234 (264)
|++||+++.. +...+. +...|.+++++|++.+|++ +.|+.|++||+++++.+..+..+.. .....
T Consensus 280 v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~ 359 (393)
T 1erj_A 280 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVA 359 (393)
T ss_dssp EEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred EEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEE
Confidence 9999998642 333343 4457999999999988765 5689999999999998888876544 33455
Q ss_pred EcC-----CCCCEEEEecCCCeEEEEEcCcce
Q 024676 235 LEP-----KLGNIFIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 235 ~~~-----~~~~~~~~gs~d~~v~vwd~~~g~ 261 (264)
+.+ +.+.+|++||.|+.|++|++...+
T Consensus 360 ~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~~ 391 (393)
T 1erj_A 360 VANGSSLGPEYNVFATGSGDCKARIWKYKKIA 391 (393)
T ss_dssp ECSSCTTCTTCEEEEEEETTSEEEEEEEEEC-
T ss_pred ecCCcCcCCCCCEEEEECCCCcEEECcccccC
Confidence 543 247899999999999999986543
No 26
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.2e-38 Score=282.43 Aligned_cols=248 Identities=22% Similarity=0.300 Sum_probs=198.9
Q ss_pred ceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeee-------CCcCCEEEEEECCCCcEEEEecC
Q 024676 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFE-------GHKGAVWSCCLDANALFSASGSA 81 (264)
Q Consensus 9 ~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~-------~H~~~V~~v~~~~~~~~l~s~s~ 81 (264)
...+.+|...|.+++|+| +|++|++|+.|++|++|+..+++.+..+. +|.+.|.+++|+|++.+++|++.
T Consensus 183 ~~~l~~H~~~V~~v~fsp---dg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~ 259 (611)
T 1nr0_A 183 KSTFGEHTKFVHSVRYNP---DGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA 259 (611)
T ss_dssp EEEECCCSSCEEEEEECT---TSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEET
T ss_pred eeeeccccCceEEEEECC---CCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeC
Confidence 345679999999999996 89999999999999999999999888884 79999999999999999999999
Q ss_pred CCeEEEEeCCCCcEEEEe--------------------------------------------ecCCeEEEEEECCCCCEE
Q 024676 82 DFTAKLWDALTGDEKHSF--------------------------------------------EHKHIVRACAFSEDTHLL 117 (264)
Q Consensus 82 D~~v~iwd~~~~~~~~~~--------------------------------------------~~~~~v~~~~~~~~~~~l 117 (264)
|++|++||+.+++....+ .|...|++++|+|++++|
T Consensus 260 D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l 339 (611)
T 1nr0_A 260 DKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTL 339 (611)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEE
Confidence 999999999887654332 367789999999999999
Q ss_pred EEeeCCCcEEEeeCCCCCCCCeE---------------------------------------------------------
Q 024676 118 LTGGFEKILRIFDLNRPDAPPRE--------------------------------------------------------- 140 (264)
Q Consensus 118 ~s~~~d~~i~~~d~~~~~~~~~~--------------------------------------------------------- 140 (264)
++++.|++|++||+.+++.....
T Consensus 340 ~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (611)
T 1nr0_A 340 FSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAV 419 (611)
T ss_dssp EEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEE
T ss_pred EEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEE
Confidence 99999999999998754321000
Q ss_pred ------------------------eccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCce--eEEecCCCCEEEEE
Q 024676 141 ------------------------VGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI--VQTLETKSPVTSAE 194 (264)
Q Consensus 141 ------------------------~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~--~~~~~~~~~v~~~~ 194 (264)
...+...+.+++++|++. ++++++.|++|++||+++++. +....+...|.+++
T Consensus 420 s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~-~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~ 498 (611)
T 1nr0_A 420 SADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQ-FVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVA 498 (611)
T ss_dssp CTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSC-EEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEE
T ss_pred eCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCC-EEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEE
Confidence 000123456788877654 677788889999999987653 23445667899999
Q ss_pred EcCCCcEEEE-eCCCcEEEEECCC-ceeeeE--Ee-cCCCCceeeEcCCCCCEEEEecCCCeEEEEEcCcce
Q 024676 195 VSRDGRYITT-ADGSSVKFWDANH-FGLVKG--YN-MPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 195 ~s~~~~~l~~-~~~~~i~iwd~~~-~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~ 261 (264)
|+|||++|++ +.|++|++||+.+ ++.+.. +. ......+++|+| ++++|++||.|++|++||+.+++
T Consensus 499 fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fsp-dg~~lasgs~D~~v~lW~~~~~~ 569 (611)
T 1nr0_A 499 FSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSP-DNVRLATGSLDNSVIVWNMNKPS 569 (611)
T ss_dssp ECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTCTT
T ss_pred ECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECC-CCCEEEEEECCCcEEEEECCCcc
Confidence 9999998876 5689999999987 555443 22 223345677877 58999999999999999998765
No 27
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=6e-38 Score=285.21 Aligned_cols=244 Identities=25% Similarity=0.345 Sum_probs=208.4
Q ss_pred eEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEe
Q 024676 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (264)
Q Consensus 10 ~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd 89 (264)
..+.+|...|.++.|+| +|++|++|+.|++|++||+.+++.++.+.+|.+.|.+++|+|++.+++||+.|++|++||
T Consensus 424 ~~~~~h~~~v~~v~~s~---~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd 500 (694)
T 3dm0_A 424 RRLTGHSHFVEDVVLSS---DGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWN 500 (694)
T ss_dssp EEEECCSSCEEEEEECT---TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ceecCCCCcEEEEEECC---CCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEE
Confidence 35679999999999996 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEe----ecCCeEEEEEECCCC--CEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEE
Q 024676 90 ALTGDEKHSF----EHKHIVRACAFSEDT--HLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (264)
Q Consensus 90 ~~~~~~~~~~----~~~~~v~~~~~~~~~--~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 163 (264)
.......... .|...|.+++|+|++ ..+++++.|++|++||+++.+. ...+..|.+.+.+++|+|++ .++++
T Consensus 501 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~-~~~~~~h~~~v~~v~~spdg-~~l~s 578 (694)
T 3dm0_A 501 TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL-RSTLAGHTGYVSTVAVSPDG-SLCAS 578 (694)
T ss_dssp TTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCE-EEEECCCSSCEEEEEECTTS-SEEEE
T ss_pred CCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcE-EEEEcCCCCCEEEEEEeCCC-CEEEE
Confidence 8665433332 367789999999986 6899999999999999986653 34455688899999999865 46777
Q ss_pred eeCCCeEEEEECCCCceeEEecCCCCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeeeEEecCCC--------------
Q 024676 164 CTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPCN-------------- 229 (264)
Q Consensus 164 ~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~-------------- 229 (264)
++.|+.|++||+++++++..+..+..+.+++|+|++.+++++.++.|++||+++.+.+..+.....
T Consensus 579 g~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (694)
T 3dm0_A 579 GGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAAT 658 (694)
T ss_dssp EETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC--------------
T ss_pred EeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccC
Confidence 888899999999999998888888889999999999999888888899999999988777653211
Q ss_pred ------CceeeEcCCCCCEEEEecCCCeEEEEEcCc
Q 024676 230 ------TESASLEPKLGNIFIAGGEDMWVHVFDFHT 259 (264)
Q Consensus 230 ------~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~ 259 (264)
..++.++| ++++|++||.|+.|++||+..
T Consensus 659 ~~~~~~~~~l~~sp-dg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 659 KRKVIYCTSLNWSA-DGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp --CCCCEEEEEECT-TSSEEEEEETTSEEEEEEC--
T ss_pred CceeEEeeeEEEcC-CCCEEEEEcCCCeEEEEeccC
Confidence 23456777 589999999999999999853
No 28
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-37 Score=259.18 Aligned_cols=248 Identities=20% Similarity=0.246 Sum_probs=191.2
Q ss_pred eecceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCC--ceEEee-eC-CcCCEEEEEECCCCcEEEEecC
Q 024676 6 VAVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG--DWIGTF-EG-HKGAVWSCCLDANALFSASGSA 81 (264)
Q Consensus 6 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~--~~~~~~-~~-H~~~V~~v~~~~~~~~l~s~s~ 81 (264)
+.....+.+|.++|.++.|+| + +|++|+.|++|++|++.++ +.+..+ .+ |.+.|.+++|+|++.++++|+.
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~---~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~ 78 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQ---G--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF 78 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEET---T--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEET
T ss_pred cccceeeccCCCceeeeccCC---C--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeC
Confidence 445566789999999999996 4 8999999999999999875 345556 44 9999999999999999999999
Q ss_pred CCeEEEEeCCCC-------cEEEEe-ecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCC---CeEeccCCCCeEE
Q 024676 82 DFTAKLWDALTG-------DEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAP---PREVGNSSGSIRT 150 (264)
Q Consensus 82 D~~v~iwd~~~~-------~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~---~~~~~~~~~~i~~ 150 (264)
|++|+|||.... .....+ .|...|.+++|+|++++|++|+.|++|++||++..... ...+..|...+.+
T Consensus 79 D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~ 158 (330)
T 2hes_X 79 DSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKH 158 (330)
T ss_dssp TSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEE
T ss_pred CCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEE
Confidence 999999998532 233444 48889999999999999999999999999999543221 2334567889999
Q ss_pred EEEecCCCeEEEEeeCCCeEEEEECCCC--ceeEEec-CCCCEEEEEEcCC--CcEE-EEeCCCcEEEEECCCc------
Q 024676 151 VAWLHSDQTILSSCTDSGGVRLWDARSG--KIVQTLE-TKSPVTSAEVSRD--GRYI-TTADGSSVKFWDANHF------ 218 (264)
Q Consensus 151 ~~~~~~~~~~~~~~~~d~~v~iwd~~~~--~~~~~~~-~~~~v~~~~~s~~--~~~l-~~~~~~~i~iwd~~~~------ 218 (264)
++|+|++ .++++++.|++|++||.+++ +++..+. +...|.+++|+|+ +.++ +++.|++|++||++..
T Consensus 159 v~~~p~~-~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~ 237 (330)
T 2hes_X 159 VIWHPSE-ALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQ 237 (330)
T ss_dssp EEECSSS-SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCE
T ss_pred EEECCCC-CEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccc
Confidence 9999865 46778888999999999876 5666665 4567999999998 5555 4567899999998754
Q ss_pred --eeeeEEec-C-CCCceeeEcCCCCCEEEEecCCCeEEEEEcCcce
Q 024676 219 --GLVKGYNM-P-CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 219 --~~~~~~~~-~-~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~ 261 (264)
.+...+.. + .....+.+.+ +.+|++|+.|+.|++||..+++
T Consensus 238 ~~~~~~~~~~~h~~~v~~v~~s~--~~~l~s~~~dg~v~iw~~~~~~ 282 (330)
T 2hes_X 238 EWVCEAILPDVHKRQVYNVAWGF--NGLIASVGADGVLAVYEEVDGE 282 (330)
T ss_dssp EEEEEEECCSCCSSCEEEEEECT--TSCEEEEETTSCEEEEEEETTE
T ss_pred eeEEeeecccccccceEEEEEcC--CCEEEEEeCCCEEEEEEcCCCc
Confidence 23333332 2 2344556664 4589999999999999987764
No 29
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.1e-38 Score=264.07 Aligned_cols=244 Identities=19% Similarity=0.224 Sum_probs=189.2
Q ss_pred EeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCc--eEEeeeCCcCCEEEEEECC--CCcEEEEecCCCeEE
Q 024676 11 VCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDA--NALFSASGSADFTAK 86 (264)
Q Consensus 11 ~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~--~~~~~~~H~~~V~~v~~~~--~~~~l~s~s~D~~v~ 86 (264)
++.+|+++|.+++|+| +|++|++|+.|++|++||+.+++ .+.++.+|.++|.+++|++ ++.+|+||+.|++|+
T Consensus 8 ~~~~H~~~V~~v~~s~---~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~ 84 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDY---YGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVI 84 (316)
T ss_dssp ------CCEEEEEECG---GGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEE
T ss_pred ecccccCeEEEeeEcC---CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEE
Confidence 3469999999999996 89999999999999999998774 4678999999999999986 478999999999999
Q ss_pred EEeCCCCc--EEEEe-ecCCeEEEEEECCC--CCEEEEeeCCCcEEEeeCCCCCCC--CeEeccCCCCeEEEEEecCC--
Q 024676 87 LWDALTGD--EKHSF-EHKHIVRACAFSED--THLLLTGGFEKILRIFDLNRPDAP--PREVGNSSGSIRTVAWLHSD-- 157 (264)
Q Consensus 87 iwd~~~~~--~~~~~-~~~~~v~~~~~~~~--~~~l~s~~~d~~i~~~d~~~~~~~--~~~~~~~~~~i~~~~~~~~~-- 157 (264)
+||+.++. ....+ .|...|++++|+|+ +.+|++|+.|+.|++||++.+... ......|...+.+++|.|+.
T Consensus 85 iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 164 (316)
T 3bg1_A 85 IWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVP 164 (316)
T ss_dssp EECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC
T ss_pred EEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCC
Confidence 99998874 34444 48889999999997 789999999999999998764311 12334567778888888752
Q ss_pred --------------CeEEEEeeCCCeEEEEECCCC---ceeEEec-CCCCEEEEEEcCCC----cEEE-EeCCCcEEEEE
Q 024676 158 --------------QTILSSCTDSGGVRLWDARSG---KIVQTLE-TKSPVTSAEVSRDG----RYIT-TADGSSVKFWD 214 (264)
Q Consensus 158 --------------~~~~~~~~~d~~v~iwd~~~~---~~~~~~~-~~~~v~~~~~s~~~----~~l~-~~~~~~i~iwd 214 (264)
..++++++.|++|++||+++. +++..+. +..+|.+++|+|++ .+|+ ++.|++|++||
T Consensus 165 ~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~ 244 (316)
T 3bg1_A 165 GSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244 (316)
T ss_dssp ------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEE
T ss_pred ccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEE
Confidence 246888899999999999865 3445554 44679999999986 5554 56789999999
Q ss_pred CCCce----eeeEEe-cCCCCceeeEcCCCCCEEEEecCCCeEEEEEcC
Q 024676 215 ANHFG----LVKGYN-MPCNTESASLEPKLGNIFIAGGEDMWVHVFDFH 258 (264)
Q Consensus 215 ~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~ 258 (264)
++... ..+.+. .......++|+| .+.+|++|+.|+.|++|+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~v~~v~~sp-~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 245 CDDASSNTWSPKLLHKFNDVVWHVSWSI-TANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CSSTTCCCCBCCEEEECSSCEEEEEECT-TTCCEEEEESSSCEEEEEEC
T ss_pred ccCccccchhhhhhhcCCCcEEEEEEcC-CCCEEEEEcCCCeEEEEEEC
Confidence 87621 112222 234455677887 48899999999999999975
No 30
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6.9e-37 Score=257.23 Aligned_cols=241 Identities=19% Similarity=0.262 Sum_probs=204.1
Q ss_pred eEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCC------ceEEeeeCCcCCEEEEEECCCCcEEEEecCCC
Q 024676 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG------DWIGTFEGHKGAVWSCCLDANALFSASGSADF 83 (264)
Q Consensus 10 ~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~------~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~ 83 (264)
.....|...|.+++|+| +|++|++|+.|+.+++|+.... .....+.+|.+.|.+++|++++..+++++.|+
T Consensus 100 ~~~~~~~~~v~~~~~sp---~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~ 176 (354)
T 2pbi_B 100 HAVTMPCTWVMACAYAP---SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDG 176 (354)
T ss_dssp EEEECSSSCCCEEEECT---TSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTS
T ss_pred eEEecCCCCEEEEEECC---CCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCC
Confidence 34567889999999996 8999999999999999988643 23567788999999999999999999999999
Q ss_pred eEEEEeCCCCcEEEEee-cCCeEEEEEECC--CCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeE
Q 024676 84 TAKLWDALTGDEKHSFE-HKHIVRACAFSE--DTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTI 160 (264)
Q Consensus 84 ~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~--~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 160 (264)
+|++||+.+++.+..+. |...|.++.++| ++++|++|+.|+.+++||+++++.. ..+..|...+.+++|+|++. +
T Consensus 177 ~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~-~~~~~h~~~v~~v~~~p~~~-~ 254 (354)
T 2pbi_B 177 TCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCV-QAFETHESDVNSVRYYPSGD-A 254 (354)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEE-EEECCCSSCEEEEEECTTSS-E
T ss_pred cEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEE-EEecCCCCCeEEEEEeCCCC-E
Confidence 99999999999888775 888999999988 4689999999999999999876543 34456788999999998654 6
Q ss_pred EEEeeCCCeEEEEECCCCceeEEecCC---CCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEecCCC-CceeeE
Q 024676 161 LSSCTDSGGVRLWDARSGKIVQTLETK---SPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCN-TESASL 235 (264)
Q Consensus 161 ~~~~~~d~~v~iwd~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~~-~~~~~~ 235 (264)
+++++.|++|++||+++++.+..+... ..+.+++|+|++.++++ +.|+.|++||+.+++.+..+..+.. ...+.+
T Consensus 255 l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~ 334 (354)
T 2pbi_B 255 FASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRV 334 (354)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEE
Confidence 778888999999999998877666533 36899999999998765 5689999999999988877765544 446677
Q ss_pred cCCCCCEEEEecCCCeEEEEE
Q 024676 236 EPKLGNIFIAGGEDMWVHVFD 256 (264)
Q Consensus 236 ~~~~~~~~~~gs~d~~v~vwd 256 (264)
+| ++.+|++||.|+.|++|+
T Consensus 335 sp-dg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 335 SP-DGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CT-TSSCEEEEETTSEEEEEC
T ss_pred CC-CCCEEEEEcCCCCEEecC
Confidence 77 589999999999999996
No 31
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.6e-37 Score=281.05 Aligned_cols=248 Identities=19% Similarity=0.263 Sum_probs=206.9
Q ss_pred EeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCC-----ceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeE
Q 024676 11 VCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG-----DWIGTFEGHKGAVWSCCLDANALFSASGSADFTA 85 (264)
Q Consensus 11 ~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~-----~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v 85 (264)
.+.+|++.|.+|+|+| .++++|+|||.|++|++|++.+. ...+.+.+|.+.|.+++|+|++.+++||+.|++|
T Consensus 377 ~l~~H~~~V~~v~~~~--~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPI--DNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGEL 454 (694)
T ss_dssp EEECCSSCEEEEECCT--TCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred hcccCCceeEEEEecC--CCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcE
Confidence 4679999999999997 34579999999999999998764 3456789999999999999999999999999999
Q ss_pred EEEeCCCCcEEEEe-ecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeE---eccCCCCeEEEEEecCC-CeE
Q 024676 86 KLWDALTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPRE---VGNSSGSIRTVAWLHSD-QTI 160 (264)
Q Consensus 86 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~---~~~~~~~i~~~~~~~~~-~~~ 160 (264)
+|||+.++.....+ .|...|.+++|+|++++|++|+.|++|++||+..... ... ...|...+.+++|+|++ ...
T Consensus 455 ~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~ 533 (694)
T 3dm0_A 455 RLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECK-YTISEGGEGHRDWVSCVRFSPNTLQPT 533 (694)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE-EEECSSTTSCSSCEEEEEECSCSSSCE
T ss_pred EEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcc-eeeccCCCCCCCcEEEEEEeCCCCcce
Confidence 99999999877766 4889999999999999999999999999999754321 111 12466789999999865 347
Q ss_pred EEEeeCCCeEEEEECCCCceeEEecC-CCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEecCCCCceeeEcCC
Q 024676 161 LSSCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCNTESASLEPK 238 (264)
Q Consensus 161 ~~~~~~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (264)
+++++.|++|++||++++++...+.. ...|.+++++|+++++++ +.|+.|++||+++++.+..+..+.....++++|+
T Consensus 534 l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~ 613 (694)
T 3dm0_A 534 IVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPN 613 (694)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSS
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCC
Confidence 88888999999999999998887764 567999999999988765 5689999999999988877766666667778774
Q ss_pred CCCEEEEecCCCeEEEEEcCcceee
Q 024676 239 LGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 239 ~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
+.+++++ .|+.|++||+.+++.+
T Consensus 614 -~~~l~~~-~~~~i~iwd~~~~~~~ 636 (694)
T 3dm0_A 614 -RYWLCAA-TEHGIKIWDLESKSIV 636 (694)
T ss_dssp -SSEEEEE-ETTEEEEEETTTTEEE
T ss_pred -CcEEEEE-cCCCEEEEECCCCCCh
Confidence 6666655 4667999999988754
No 32
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.5e-36 Score=250.20 Aligned_cols=244 Identities=21% Similarity=0.392 Sum_probs=204.0
Q ss_pred eEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEe
Q 024676 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (264)
Q Consensus 10 ~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd 89 (264)
..+.+|..+|.+++|+| ++++|++|+.|+.+++||..+++.+..+.+|.+.|.+++|+|++.++++|+.|++|++||
T Consensus 59 ~~~~~h~~~v~~~~~~~---~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd 135 (312)
T 4ery_A 59 KTISGHKLGISDVAWSS---DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 135 (312)
T ss_dssp EEECCCSSCEEEEEECT---TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred hhhccCCCceEEEEEcC---CCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEE
Confidence 44578999999999996 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEee-cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCC
Q 024676 90 ALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSG 168 (264)
Q Consensus 90 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~ 168 (264)
+.+++....+. |..+|..++|+|+++++++++.|+.|++||+++++........+...+..++|.|++. ++++++.|+
T Consensus 136 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~ 214 (312)
T 4ery_A 136 VKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK-YILAATLDN 214 (312)
T ss_dssp TTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSS-EEEEEETTT
T ss_pred CCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCC-EEEEEcCCC
Confidence 99998777764 7789999999999999999999999999999876644344445566788899988765 455677789
Q ss_pred eEEEEECCCCceeEEecCCC-C---EEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEecCCC-CceeeEcCCCCCE
Q 024676 169 GVRLWDARSGKIVQTLETKS-P---VTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCN-TESASLEPKLGNI 242 (264)
Q Consensus 169 ~v~iwd~~~~~~~~~~~~~~-~---v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 242 (264)
.|++||+++++++..+..+. . +......+++.++++ +.|+.|++||+++.+.+..+..+.. .....++| .+.+
T Consensus 215 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p-~~~~ 293 (312)
T 4ery_A 215 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHP-TENI 293 (312)
T ss_dssp EEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECS-SSSE
T ss_pred eEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecC-cCCc
Confidence 99999999999888775432 1 233334467777766 4589999999999999888876544 44567777 4788
Q ss_pred EEEec--CCCeEEEEEcC
Q 024676 243 FIAGG--EDMWVHVFDFH 258 (264)
Q Consensus 243 ~~~gs--~d~~v~vwd~~ 258 (264)
+++++ .|+.|++|+.+
T Consensus 294 l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 294 IASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEEECTTTCCEEEEECC
T ss_pred eEEEEccCCccEEEecCC
Confidence 88886 69999999864
No 33
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=273.03 Aligned_cols=245 Identities=18% Similarity=0.277 Sum_probs=200.7
Q ss_pred ccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCc-----------eEEeeeCCc------------CCEEEEEEC
Q 024676 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD-----------WIGTFEGHK------------GAVWSCCLD 70 (264)
Q Consensus 14 ~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~-----------~~~~~~~H~------------~~V~~v~~~ 70 (264)
.|.++|.+|+|+| +|++||+|+.|+.|++|+..+++ ....+.+|. +.|.+++|+
T Consensus 26 ~~~~~V~~v~~s~---~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~ 102 (447)
T 3dw8_B 26 AEADIISTVEFNH---SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWL 102 (447)
T ss_dssp CGGGSEEEEEECS---SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEEC
T ss_pred cccCcEEEEEECC---CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEc
Confidence 3688999999996 89999999999999999998776 577899998 889999999
Q ss_pred CCC--cEEEEecCCCeEEEEeCCCCcEE---------------------------------------EE--eecCCeEEE
Q 024676 71 ANA--LFSASGSADFTAKLWDALTGDEK---------------------------------------HS--FEHKHIVRA 107 (264)
Q Consensus 71 ~~~--~~l~s~s~D~~v~iwd~~~~~~~---------------------------------------~~--~~~~~~v~~ 107 (264)
|++ .++++++.|++|++||+.++... .. ..|...|.+
T Consensus 103 ~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 182 (447)
T 3dw8_B 103 PQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINS 182 (447)
T ss_dssp CCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCE
T ss_pred CCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEE
Confidence 998 78999999999999998764321 12 247888999
Q ss_pred EEECCCCCEEEEeeCCCcEEEeeCCCCCCCCe-------EeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCce
Q 024676 108 CAFSEDTHLLLTGGFEKILRIFDLNRPDAPPR-------EVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI 180 (264)
Q Consensus 108 ~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~-------~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~ 180 (264)
++|+|++++|++| .|+.|++||++....... ....|...+.+++|+|++..++++++.|+.|++||+++++.
T Consensus 183 ~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 183 ISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp EEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred EEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 9999999999998 799999999974322111 13457788999999988756788888999999999999886
Q ss_pred ----eEEecCCC-------------CEEEEEEcCCCcEEEEeCCCcEEEEECCC-ceeeeEEecCCCCc-----------
Q 024676 181 ----VQTLETKS-------------PVTSAEVSRDGRYITTADGSSVKFWDANH-FGLVKGYNMPCNTE----------- 231 (264)
Q Consensus 181 ----~~~~~~~~-------------~v~~~~~s~~~~~l~~~~~~~i~iwd~~~-~~~~~~~~~~~~~~----------- 231 (264)
+..+..+. ++.+++|+|++++|+++.++.|++||+++ ++++..+..+....
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 341 (447)
T 3dw8_B 262 CDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDC 341 (447)
T ss_dssp SCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSG
T ss_pred ccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeeccccccccccccccccc
Confidence 56666543 89999999999988776559999999997 77777777654322
Q ss_pred -----eeeEcCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 232 -----SASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 232 -----~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
.+++.| ++.+|++|+.|+.|++||+.+++.+
T Consensus 342 i~~~~~~~~s~-~~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 342 IFDKFECCWNG-SDSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp GGCCCCEEECT-TSSEEEEECSTTEEEEEETTTCCEE
T ss_pred cccceEEEECC-CCCEEEEeccCCEEEEEEcCCCcce
Confidence 267777 4889999999999999999988753
No 34
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-36 Score=251.96 Aligned_cols=253 Identities=23% Similarity=0.430 Sum_probs=218.4
Q ss_pred eecceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeE
Q 024676 6 VAVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTA 85 (264)
Q Consensus 6 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v 85 (264)
..++..+.+|..+|.+|+|+| +|++|++|+.|+.|++|+..+++.+..+.+|.+.|.+++|+|++.++++++.|++|
T Consensus 22 ~~~~~~l~~h~~~v~~~~~s~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i 98 (369)
T 3zwl_B 22 HMKAIKLTGHERPLTQVKYNK---EGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSI 98 (369)
T ss_dssp SEEEEEEECCSSCEEEEEECT---TSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEE
T ss_pred ccccEEEEEeeceEEEEEEcC---CCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 345677899999999999996 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEEeeCC-----CcEEEeeCCCCCCC----------CeEeccCCC--Ce
Q 024676 86 KLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFE-----KILRIFDLNRPDAP----------PREVGNSSG--SI 148 (264)
Q Consensus 86 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----~~i~~~d~~~~~~~----------~~~~~~~~~--~i 148 (264)
++||+.+++.+..+.+..++..++|+|+++++++++.+ +.+++||++..... ......+.+ .+
T Consensus 99 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (369)
T 3zwl_B 99 KLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAA 178 (369)
T ss_dssp EEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCE
T ss_pred EEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccce
Confidence 99999999999999999999999999999999999998 99999998765432 122223333 78
Q ss_pred EEEEEecCCCeEEEEeeCCCeEEEEECCC-CceeEEec-CCCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEe
Q 024676 149 RTVAWLHSDQTILSSCTDSGGVRLWDARS-GKIVQTLE-TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYN 225 (264)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~d~~v~iwd~~~-~~~~~~~~-~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~ 225 (264)
.+++|.+++. ++++++.|+.|++||+++ ++.+..+. +..++.+++|+|++.+|++ +.++.|++||+++++.+..+.
T Consensus 179 ~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 179 TVAGWSTKGK-YIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE 257 (369)
T ss_dssp EEEEECGGGC-EEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred eEEEEcCCCC-EEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec
Confidence 9999988665 556677889999999998 67776665 4567999999999987765 568999999999999998888
Q ss_pred cCCCCceeeEcCCCCCEEEEecCCC--------------eEEEEEcCcceee
Q 024676 226 MPCNTESASLEPKLGNIFIAGGEDM--------------WVHVFDFHTGEQI 263 (264)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~gs~d~--------------~v~vwd~~~g~~i 263 (264)
.......+.+.+ .+.++++++.++ .+++||..+++.+
T Consensus 258 ~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 308 (369)
T 3zwl_B 258 TDCPLNTAVITP-LKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEI 308 (369)
T ss_dssp CSSCEEEEEECS-SSSEEEEEECCC-------------CEEEEEETTTCCEE
T ss_pred CCCCceeEEecC-CCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcch
Confidence 777777778887 488999999888 8999999888764
No 35
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4.6e-37 Score=260.75 Aligned_cols=255 Identities=16% Similarity=0.146 Sum_probs=212.3
Q ss_pred CCcceeecceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCc------eEEeeeCCcCCEEEEEECCC--
Q 024676 1 MDKRKVAVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD------WIGTFEGHKGAVWSCCLDAN-- 72 (264)
Q Consensus 1 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~------~~~~~~~H~~~V~~v~~~~~-- 72 (264)
|-+..+....++.+|.++|.+|+|+| ++|++|+.|+.|++|+..+++ .+..+.+|...|.+++|+++
T Consensus 1 m~~~~~~~~~~~~~h~~~i~~~~~~~-----~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 75 (397)
T 1sq9_A 1 MSKVFIATANAGKAHDADIFSVSACN-----SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIE 75 (397)
T ss_dssp --CEEEEEEEESSCSSSCEEEEEECS-----SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEE
T ss_pred CchhhhhhhhhhhhhhcCeEEEEecC-----CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccc
Confidence 45555666677789999999999986 589999999999999999887 78889999999999999999
Q ss_pred --C---cEEEEecCCCeEEEEeCCCCcE-----EEEee-c-----CCeEEEEEEC----CCCCE-EEEeeCCCcEEEeeC
Q 024676 73 --A---LFSASGSADFTAKLWDALTGDE-----KHSFE-H-----KHIVRACAFS----EDTHL-LLTGGFEKILRIFDL 131 (264)
Q Consensus 73 --~---~~l~s~s~D~~v~iwd~~~~~~-----~~~~~-~-----~~~v~~~~~~----~~~~~-l~s~~~d~~i~~~d~ 131 (264)
+ .++++++.|+.|++||+.++.. ...+. | ...|.+++|+ |++++ |++++.|+.|++||+
T Consensus 76 ~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 155 (397)
T 1sq9_A 76 RDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKF 155 (397)
T ss_dssp TTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEE
T ss_pred cCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeC
Confidence 9 9999999999999999988774 55554 5 4889999999 99999 999999999999999
Q ss_pred CC------CCCCC-----eEe------ccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEecC-------C
Q 024676 132 NR------PDAPP-----REV------GNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET-------K 187 (264)
Q Consensus 132 ~~------~~~~~-----~~~------~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~-------~ 187 (264)
+. ++... ... ..+...+.+++|+|++ ++++++.|+.|++||+++++.+..+.. .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~ 233 (397)
T 1sq9_A 156 HPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRPLYNFESQHSMINNS 233 (397)
T ss_dssp ESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEEEEEEECCC---CCC
T ss_pred CccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCceeEEEeccccccccC
Confidence 87 44433 222 3467789999999876 777888889999999999998888875 6
Q ss_pred CCEEEEEEcCCCcEEEEe-CC---CcEEEEECCCceeeeEEec-------------CC-CCceeeEcCCCCCEEEEecCC
Q 024676 188 SPVTSAEVSRDGRYITTA-DG---SSVKFWDANHFGLVKGYNM-------------PC-NTESASLEPKLGNIFIAGGED 249 (264)
Q Consensus 188 ~~v~~~~~s~~~~~l~~~-~~---~~i~iwd~~~~~~~~~~~~-------------~~-~~~~~~~~~~~~~~~~~gs~d 249 (264)
.++.+++|+|++.+|+++ .+ +.|++||+++++.+..+.. +. ....+.+.+ ++.+|++++.|
T Consensus 234 ~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d 312 (397)
T 1sq9_A 234 NSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFND-SGETLCSAGWD 312 (397)
T ss_dssp CCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECS-SSSEEEEEETT
T ss_pred CccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECC-CCCEEEEEeCC
Confidence 789999999999887654 56 8999999999988888865 33 345667777 58999999999
Q ss_pred CeEEEEEcCcceee
Q 024676 250 MWVHVFDFHTGEQI 263 (264)
Q Consensus 250 ~~v~vwd~~~g~~i 263 (264)
+.|++||+.+++.+
T Consensus 313 g~i~iwd~~~~~~~ 326 (397)
T 1sq9_A 313 GKLRFWDVKTKERI 326 (397)
T ss_dssp SEEEEEETTTTEEE
T ss_pred CeEEEEEcCCCcee
Confidence 99999999988764
No 36
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7.7e-37 Score=274.27 Aligned_cols=243 Identities=13% Similarity=0.143 Sum_probs=204.0
Q ss_pred eccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCC
Q 024676 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALT 92 (264)
Q Consensus 13 ~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~ 92 (264)
..+.+.+.+++|+| ||++|++++ ++.+++|++.+++....|.+|.+.|.+++|+|++.+++||+.|++|+|||+.+
T Consensus 15 ~~~~g~~~~~~~sp---dg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~ 90 (611)
T 1nr0_A 15 RTARGTAVVLGNTP---AGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQ 90 (611)
T ss_dssp CCCTTCCCCCEECT---TSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSS
T ss_pred CcccCceeEEeeCC---CCCEEEeCC-CCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCC
Confidence 46777888999996 999999998 56999999998888899999999999999999999999999999999999875
Q ss_pred Cc--EEEEe-ecCCeEEEEEECCCCCEEEEeeCC----CcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEee
Q 024676 93 GD--EKHSF-EHKHIVRACAFSEDTHLLLTGGFE----KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT 165 (264)
Q Consensus 93 ~~--~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d----~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 165 (264)
+. ....+ .|..+|..++|+|++++|++++.+ +.+++||... . ...+..|...+.+++|+|++...+++++
T Consensus 91 ~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~--~-~~~l~gh~~~v~~v~f~p~~~~~l~s~s 167 (611)
T 1nr0_A 91 TTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGT--S-NGNLTGQARAMNSVDFKPSRPFRIISGS 167 (611)
T ss_dssp TTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCC--B-CBCCCCCSSCEEEEEECSSSSCEEEEEE
T ss_pred CcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCC--C-cceecCCCCCceEEEECCCCCeEEEEEe
Confidence 43 33344 478899999999999999998875 3688888532 2 2344568889999999998877788999
Q ss_pred CCCeEEEEECCCCceeEEecC-CCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEe-------cC-CCCceeeE
Q 024676 166 DSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYN-------MP-CNTESASL 235 (264)
Q Consensus 166 ~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~-------~~-~~~~~~~~ 235 (264)
.|++|++||.++++++..+.. ...|.+++|+|++++|++ +.|++|++||+++++.+..+. .+ .....+.|
T Consensus 168 ~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~ 247 (611)
T 1nr0_A 168 DDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTW 247 (611)
T ss_dssp TTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEE
T ss_pred CCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEE
Confidence 999999999999988888864 457999999999988765 568999999999988887773 22 23456677
Q ss_pred cCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 236 EPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 236 ~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
.| ++++|++||.|++|++||+.+++.+
T Consensus 248 sp-dg~~l~s~s~D~~v~lWd~~~~~~~ 274 (611)
T 1nr0_A 248 SP-DGTKIASASADKTIKIWNVATLKVE 274 (611)
T ss_dssp CT-TSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CC-CCCEEEEEeCCCeEEEEeCCCCcee
Confidence 77 5899999999999999999988753
No 37
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.2e-36 Score=248.94 Aligned_cols=249 Identities=18% Similarity=0.220 Sum_probs=201.4
Q ss_pred EeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCC----ceEEeeeCCcCCEEEEEECC--CCcEEEEecCCCe
Q 024676 11 VCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG----DWIGTFEGHKGAVWSCCLDA--NALFSASGSADFT 84 (264)
Q Consensus 11 ~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~----~~~~~~~~H~~~V~~v~~~~--~~~~l~s~s~D~~ 84 (264)
++.||+++|.+|+|+| ++++|++|+.|+.|++|+..++ +.+..+.+|.+.|.+++|+| ++.++++|+.|++
T Consensus 6 ~~~gH~~~v~~~~~~~---~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDF---YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp EECCCSSCEEEEEECS---SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cCcccccceeEEEEcC---CCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 4579999999999996 8999999999999999999876 35677889999999999999 6899999999999
Q ss_pred EEEEeCCCCc---------EEEEe-ecCCeEEEEEECCC--CCEEEEeeCCCcEEEeeCCCCCCCCeEe-----------
Q 024676 85 AKLWDALTGD---------EKHSF-EHKHIVRACAFSED--THLLLTGGFEKILRIFDLNRPDAPPREV----------- 141 (264)
Q Consensus 85 v~iwd~~~~~---------~~~~~-~~~~~v~~~~~~~~--~~~l~s~~~d~~i~~~d~~~~~~~~~~~----------- 141 (264)
|++||+.++. ....+ .|..+|..++|+|+ ++++++++.|+.+++||+++++......
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 162 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIP 162 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCC
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccc
Confidence 9999998763 34444 47889999999999 9999999999999999998766433221
Q ss_pred -ccCCCCeEEEEEecC--CCeEEEEeeCCCeEEEEECCCCce--eEEec-CCCCEEEEEEcCCC----cEEE-EeCCCcE
Q 024676 142 -GNSSGSIRTVAWLHS--DQTILSSCTDSGGVRLWDARSGKI--VQTLE-TKSPVTSAEVSRDG----RYIT-TADGSSV 210 (264)
Q Consensus 142 -~~~~~~i~~~~~~~~--~~~~~~~~~~d~~v~iwd~~~~~~--~~~~~-~~~~v~~~~~s~~~----~~l~-~~~~~~i 210 (264)
..+...+.+++|.|. +..++++++.++.+.+|+...++. +..+. +..+|.+++|+|++ ++++ ++.|+.|
T Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i 242 (351)
T 3f3f_A 163 PANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRI 242 (351)
T ss_dssp CSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCE
T ss_pred cCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeE
Confidence 145667899999986 355677778889998888887765 44454 45679999999998 5655 4668999
Q ss_pred EEEECCCc----------------------------------------------eeeeEEecCC-CCceeeEcCCCCCEE
Q 024676 211 KFWDANHF----------------------------------------------GLVKGYNMPC-NTESASLEPKLGNIF 243 (264)
Q Consensus 211 ~iwd~~~~----------------------------------------------~~~~~~~~~~-~~~~~~~~~~~~~~~ 243 (264)
++||++.. +.+..+..+. ....+.+.+ .+.+|
T Consensus 243 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l 321 (351)
T 3f3f_A 243 RIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNL-TGTIL 321 (351)
T ss_dssp EEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECS-SSCCE
T ss_pred EEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcC-CCCEE
Confidence 99999764 4445554433 345667777 58899
Q ss_pred EEecCCCeEEEEEcCcceee
Q 024676 244 IAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 244 ~~gs~d~~v~vwd~~~g~~i 263 (264)
++|+.|+.|++||+.+++++
T Consensus 322 ~s~~~dg~v~iw~~~~~~~~ 341 (351)
T 3f3f_A 322 SSAGDDGKVRLWKATYSNEF 341 (351)
T ss_dssp EEEETTSCEEEEEECTTSCE
T ss_pred EEecCCCcEEEEecCcCcch
Confidence 99999999999999987653
No 38
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-37 Score=257.87 Aligned_cols=248 Identities=18% Similarity=0.250 Sum_probs=201.4
Q ss_pred ceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCC--CCceEEeeeCCcCCEEEEEECCC--CcEEEEecCCCe
Q 024676 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGE--TGDWIGTFEGHKGAVWSCCLDAN--ALFSASGSADFT 84 (264)
Q Consensus 9 ~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~--~~~~~~~~~~H~~~V~~v~~~~~--~~~l~s~s~D~~ 84 (264)
..++.+|.++|.+++|+| ++++|++|+.|+.|++|+.. +++.+..+.+|.+.|.+++|+++ +.++++|+.|+.
T Consensus 4 ~~~~~~h~~~v~~~~~s~---~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDY---YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp -CCEEECCCCEEEEEECS---SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cEEecCCcccEEEEEEcC---CCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 345689999999999996 89999999999999999997 45677889999999999999987 899999999999
Q ss_pred EEEEeCCCCc--EEEEe-ecCCeEEEEEECCC--CCEEEEeeCCCcEEEeeCCCCCCCC-eEeccCCCCeEEEEEecC--
Q 024676 85 AKLWDALTGD--EKHSF-EHKHIVRACAFSED--THLLLTGGFEKILRIFDLNRPDAPP-REVGNSSGSIRTVAWLHS-- 156 (264)
Q Consensus 85 v~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~--~~~l~s~~~d~~i~~~d~~~~~~~~-~~~~~~~~~i~~~~~~~~-- 156 (264)
|++||+.++. ....+ .|...|.+++|+|+ ++++++++.|+.|++||++...... .....+...+.+++|.|.
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccc
Confidence 9999999886 44444 37889999999999 9999999999999999998764433 344567889999999985
Q ss_pred ----------CCeEEEEeeCCCeEEEEECCCCce----eEEec-CCCCEEEEEEcCC---CcEEEE-eCCCcEEEEECCC
Q 024676 157 ----------DQTILSSCTDSGGVRLWDARSGKI----VQTLE-TKSPVTSAEVSRD---GRYITT-ADGSSVKFWDANH 217 (264)
Q Consensus 157 ----------~~~~~~~~~~d~~v~iwd~~~~~~----~~~~~-~~~~v~~~~~s~~---~~~l~~-~~~~~i~iwd~~~ 217 (264)
++.++++++.|+.|++||+++++. ...+. +..++.+++|+|+ +.++++ +.|+.|++||+++
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp ---------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC
Confidence 456777888889999999987653 23443 4567999999999 777665 5689999999987
Q ss_pred cee---eeEEe---cCCCCceeeEcCCCCCEEEEecCCCeEEEEEcCcc
Q 024676 218 FGL---VKGYN---MPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTG 260 (264)
Q Consensus 218 ~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g 260 (264)
.+. ...+. .......+.+.| ++.+|++++.|+.|++|++.++
T Consensus 241 ~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 241 EQGPWKKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp TTSCCEEEESSSSCCSSCEEEEEECS-SSCCEEEEESSSSEEEEEEEET
T ss_pred CCccceeeeeccccCCCcEEEEEEcC-CCCEEEEecCCCcEEEEeCCCC
Confidence 631 11121 223345667777 4889999999999999998743
No 39
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.7e-36 Score=256.66 Aligned_cols=248 Identities=13% Similarity=0.139 Sum_probs=200.6
Q ss_pred cceEeeccCCCeeeeEeccCCCCC-eEEEEEeCCCCcEEEeCCCCceEEeee--CCcCCEEEEEECC-CCcEEEEecCCC
Q 024676 8 VPLVCHGHSRPVVDLFYSPITPDG-FFLVSASKDSSPMLRNGETGDWIGTFE--GHKGAVWSCCLDA-NALFSASGSADF 83 (264)
Q Consensus 8 ~~~~~~~h~~~v~~~~~~~~~~~g-~~l~t~s~d~~v~i~~~~~~~~~~~~~--~H~~~V~~v~~~~-~~~~l~s~s~D~ 83 (264)
....+.+|..+|.+++|+| ++ ++|++|+.|+.|++|+..+++....+. +|.+.|.+++|+| ++.++++++.|+
T Consensus 65 ~~~~~~~h~~~v~~~~~~~---~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHP---THPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp EEEEECCCSSCEEEEEECS---SCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT
T ss_pred eEEeccCCCCCEEEEEECC---CCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC
Confidence 3445679999999999997 77 899999999999999999888766665 7999999999999 678999999999
Q ss_pred eEEEEeCCCCcEEEEee---cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeE
Q 024676 84 TAKLWDALTGDEKHSFE---HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTI 160 (264)
Q Consensus 84 ~v~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 160 (264)
+|++||+.+........ +...|.+++|+|+++++++++.|+.|++||++ ++ ....+..|.+.+.+++|+|++..+
T Consensus 142 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~-~~~~~~~h~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 142 ATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GH-EIFKEKLHKAKVTHAEFNPRCDWL 219 (383)
T ss_dssp EEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SC-EEEEEECSSSCEEEEEECSSCTTE
T ss_pred EEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CC-EEEEeccCCCcEEEEEECCCCCCE
Confidence 99999998644333322 34679999999999999999999999999994 33 234455678899999999988768
Q ss_pred EEEeeCCCeEEEEECCC----CceeEEecCCCCEEEEEEcC-CCcEEEE-eCCCcEEEEECCCceeeeEEecCC------
Q 024676 161 LSSCTDSGGVRLWDARS----GKIVQTLETKSPVTSAEVSR-DGRYITT-ADGSSVKFWDANHFGLVKGYNMPC------ 228 (264)
Q Consensus 161 ~~~~~~d~~v~iwd~~~----~~~~~~~~~~~~v~~~~~s~-~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~------ 228 (264)
+++++.|+.|++||+++ ++++..+.+..++.+++|+| ++.++++ +.|+.|++||+++++....+..+.
T Consensus 220 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 299 (383)
T 3ei3_B 220 MATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQH 299 (383)
T ss_dssp EEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTT
T ss_pred EEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccccc
Confidence 88889999999999998 66777777778999999999 9987765 568999999999887765554221
Q ss_pred -CCce-----------eeEcCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 229 -NTES-----------ASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 229 -~~~~-----------~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
.... +.+.+ ++.+ +|+.|+.|++||+.+++.+
T Consensus 300 ~~~~~~~~~p~~~~~~~~~s~-dg~~--s~s~d~~i~iwd~~~~~~~ 343 (383)
T 3ei3_B 300 LTPIKATWHPMYDLIVAGRYP-DDQL--LLNDKRTIDIYDANSGGLV 343 (383)
T ss_dssp SCCCCCEECSSSSEEEEECBC-CTTT--CTTCCCCEEEEETTTCCEE
T ss_pred ccceEEeccCCCCceEEEecC-Cccc--ccCCCCeEEEEecCCCcee
Confidence 1112 22333 3444 7789999999999988764
No 40
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-35 Score=252.39 Aligned_cols=243 Identities=21% Similarity=0.303 Sum_probs=206.2
Q ss_pred ccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCC-
Q 024676 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALT- 92 (264)
Q Consensus 14 ~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~- 92 (264)
.|..+|.+++|+| ++++|++|+.|+.+++|+..+++.+..+.+|.+.|.+++| ++.++++|+.|+.|++||+..
T Consensus 132 ~~~~~v~~v~~s~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~ 206 (401)
T 4aez_A 132 DESTYVASVKWSH---DGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIA 206 (401)
T ss_dssp CTTCCEEEEEECT---TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSS
T ss_pred CCCCCEEEEEECC---CCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccC
Confidence 4899999999996 8999999999999999999999999999999999999999 457999999999999999984
Q ss_pred CcEEEEe-ecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEee--CCCe
Q 024676 93 GDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT--DSGG 169 (264)
Q Consensus 93 ~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~d~~ 169 (264)
......+ .|...|.+++|+|+++++++++.|+.|++||+++++.. .....+...+.+++|+|.+..++++++ .|+.
T Consensus 207 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~-~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~ 285 (401)
T 4aez_A 207 NHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPK-FTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQ 285 (401)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEE-EEECCCSSCCCEEEECTTSTTEEEEECCTTTCE
T ss_pred cceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCcc-EEecCCcceEEEEEECCCCCCEEEEecCCCCCE
Confidence 4444444 48889999999999999999999999999999875432 344567889999999998888888866 6899
Q ss_pred EEEEECCCCceeEEecCCCCEEEEEEcCCCcEEEE--e-CCCcEEEEECCCceeeeEEe--cC-CCCceeeEcCCCCCEE
Q 024676 170 VRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITT--A-DGSSVKFWDANHFGLVKGYN--MP-CNTESASLEPKLGNIF 243 (264)
Q Consensus 170 v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~-~~~~i~iwd~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~ 243 (264)
|++||+++++.+..+....++.+++|+|+++++++ + .++.|++||+++.+....+. .+ .....+.+.+ ++.+|
T Consensus 286 i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~-dg~~l 364 (401)
T 4aez_A 286 IHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSP-DGRIL 364 (401)
T ss_dssp EEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECT-TSSEE
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECC-CCCEE
Confidence 99999999999998888889999999999988765 3 47999999999876555443 32 3455677777 58999
Q ss_pred EEecCCCeEEEEEcCcceee
Q 024676 244 IAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 244 ~~gs~d~~v~vwd~~~g~~i 263 (264)
++++.|+.|++||+.+++.+
T Consensus 365 ~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 365 STAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp EEECTTSEEEEEECCC----
T ss_pred EEEeCCCcEEEEECCCCccc
Confidence 99999999999999988764
No 41
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.9e-36 Score=276.91 Aligned_cols=254 Identities=19% Similarity=0.234 Sum_probs=220.7
Q ss_pred eecceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeE
Q 024676 6 VAVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTA 85 (264)
Q Consensus 6 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v 85 (264)
+.....+.+|++.|.+++|+| +|++|++|+.|+.|++|+..+++.+..+.+|.++|.+++|+|++.++++|+.|+.|
T Consensus 3 l~~~~~~~~h~~~v~~i~~sp---~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 79 (814)
T 3mkq_A 3 LDIKKTFSNRSDRVKGIDFHP---TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRI 79 (814)
T ss_dssp CCCEEEEEEECSCEEEEEECS---SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEE
T ss_pred cccceeeecCCCceEEEEECC---CCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeE
Confidence 345567789999999999996 89999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCcEEEEee-cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEe
Q 024676 86 KLWDALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSC 164 (264)
Q Consensus 86 ~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 164 (264)
++||+.+++....+. |...|.+++|+|++++|++++.|+.+++||++++.........+...+.+++|+|.++..++++
T Consensus 80 ~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~ 159 (814)
T 3mkq_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASG 159 (814)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEE
T ss_pred EEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEE
Confidence 999999998887776 8889999999999999999999999999999876444455566788999999998666678888
Q ss_pred eCCCeEEEEECCCCceeEEecC--CCCEEEEEEcC--CCcEEEE-eCCCcEEEEECCCceeeeEEecCCC-CceeeEcCC
Q 024676 165 TDSGGVRLWDARSGKIVQTLET--KSPVTSAEVSR--DGRYITT-ADGSSVKFWDANHFGLVKGYNMPCN-TESASLEPK 238 (264)
Q Consensus 165 ~~d~~v~iwd~~~~~~~~~~~~--~~~v~~~~~s~--~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~ 238 (264)
+.|+.|++||+++++....+.. ..++..++++| ++.++++ +.++.|++||+++++.+..+..+.. ...+.++|
T Consensus 160 ~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~- 238 (814)
T 3mkq_A 160 CLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP- 238 (814)
T ss_dssp ETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECS-
T ss_pred eCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-
Confidence 8899999999998887666643 26799999999 8877765 4578999999999998888876543 44667777
Q ss_pred CCCEEEEecCCCeEEEEEcCcceee
Q 024676 239 LGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 239 ~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
.+.++++++.|+.|++||+.+++.+
T Consensus 239 ~~~~l~~~~~dg~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 239 TLPIIISGSEDGTLKIWNSSTYKVE 263 (814)
T ss_dssp SSSEEEEEETTSCEEEEETTTCSEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEE
Confidence 5889999999999999999887653
No 42
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.2e-35 Score=244.43 Aligned_cols=249 Identities=16% Similarity=0.187 Sum_probs=206.2
Q ss_pred cceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCce---EEeee--CCcCCEEEEEECCCCcEEEEecCC
Q 024676 8 VPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDW---IGTFE--GHKGAVWSCCLDANALFSASGSAD 82 (264)
Q Consensus 8 ~~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~---~~~~~--~H~~~V~~v~~~~~~~~l~s~s~D 82 (264)
.+....+|..+|.+++|+| ++++|++++ |+.+++|+..+++. +..+. +|...|.+++|+|++.++++++.|
T Consensus 43 ~~~~~~~h~~~v~~~~~~~---~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 118 (337)
T 1gxr_A 43 RQINTLNHGEVVCAVTISN---PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA 118 (337)
T ss_dssp EEEEEECCSSCCCEEEECS---SSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS
T ss_pred ccceeccCCCceEEEEEec---CCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC
Confidence 3444568999999999996 899999999 99999999987753 33333 799999999999999999999999
Q ss_pred CeEEEEeCCCCc--EEEEe-ecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCe
Q 024676 83 FTAKLWDALTGD--EKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQT 159 (264)
Q Consensus 83 ~~v~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 159 (264)
+.|++||+.++. ....+ .|...+..++|+|+++++++++.|+.+++||+++++. ......+...+.+++|+|++.
T Consensus 119 ~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~- 196 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL-VRQFQGHTDGASCIDISNDGT- 196 (337)
T ss_dssp SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEECTTSS-
T ss_pred CcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCce-eeeeecccCceEEEEECCCCC-
Confidence 999999999876 33333 3777899999999999999999999999999987643 234455788999999998665
Q ss_pred EEEEeeCCCeEEEEECCCCceeEEecCCCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEecCCCCceeeEcCC
Q 024676 160 ILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCNTESASLEPK 238 (264)
Q Consensus 160 ~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (264)
++++++.|+.|++||+++++.+..+....++.+++++|+++++++ +.++.|++||+++.+.............+.+.+
T Consensus 197 ~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~- 275 (337)
T 1gxr_A 197 KLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAY- 275 (337)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECT-
T ss_pred EEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECC-
Confidence 566677889999999999999888888889999999999988765 557899999999887654333344455677777
Q ss_pred CCCEEEEecCCCeEEEEEcCcceee
Q 024676 239 LGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 239 ~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
++++|++++.|+.|++||+.+++.+
T Consensus 276 ~~~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 276 CGKWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCEEEEecCCCcEEEEECCCCeEE
Confidence 5889999999999999999988754
No 43
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=4.2e-35 Score=251.57 Aligned_cols=246 Identities=15% Similarity=0.252 Sum_probs=210.0
Q ss_pred eEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEe
Q 024676 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (264)
Q Consensus 10 ~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd 89 (264)
..+++|...|.+|+|+| +|++|++|+.|+.|++|+.++++.+..+.+|...|.+++++ +.++++|+.|+.+++||
T Consensus 141 ~~~~~~~~~V~sv~fsp---dg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d 215 (420)
T 4gga_A 141 LQMEQPGEYISSVAWIK---EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHD 215 (420)
T ss_dssp EECCSTTCCEEEEEECT---TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEE
T ss_pred EEecCCCCcEEEEEECC---CCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEee
Confidence 34468899999999996 99999999999999999999999999999999999988775 67899999999999999
Q ss_pred CCCCc-EEEEe-ecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCC---CeEeccCCCCeEEEEEecCCCeEEEE-
Q 024676 90 ALTGD-EKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAP---PREVGNSSGSIRTVAWLHSDQTILSS- 163 (264)
Q Consensus 90 ~~~~~-~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~- 163 (264)
..... ....+ .|...+..+.++|+++++++++.|+.+++|+...++.. ......+.+.+.+++|+|.+..++++
T Consensus 216 ~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~ 295 (420)
T 4gga_A 216 VRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATG 295 (420)
T ss_dssp TTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEE
T ss_pred ecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEE
Confidence 87754 33443 48889999999999999999999999999999766432 34455678899999999988877765
Q ss_pred -eeCCCeEEEEECCCCceeEEecCCCCEEEEEEcCCCcEEEEe---CCCcEEEEECCCceeeeEEecCCC-CceeeEcCC
Q 024676 164 -CTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTA---DGSSVKFWDANHFGLVKGYNMPCN-TESASLEPK 238 (264)
Q Consensus 164 -~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~---~~~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~ 238 (264)
++.|++|++||+++++++..+..+..+.++.++|++..++++ .++.|++||+++++++..+..+.. +..++++|
T Consensus 296 ~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~sp- 374 (420)
T 4gga_A 296 GGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSP- 374 (420)
T ss_dssp ECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECT-
T ss_pred eecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC-
Confidence 457899999999999999999888899999999999776543 478999999999999999876554 45667777
Q ss_pred CCCEEEEecCCCeEEEEEcCcce
Q 024676 239 LGNIFIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 239 ~~~~~~~gs~d~~v~vwd~~~g~ 261 (264)
++.+|++||.|++|++||+.+.+
T Consensus 375 dg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 375 DGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp TSSCEEEEETTTEEEEECCSCSS
T ss_pred CCCEEEEEecCCeEEEEECCCCC
Confidence 58999999999999999986544
No 44
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-37 Score=262.74 Aligned_cols=247 Identities=12% Similarity=0.104 Sum_probs=193.8
Q ss_pred eecceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCC--ceEEeeeCCcCCEEEEEECCCCcEEEEecCCC
Q 024676 6 VAVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG--DWIGTFEGHKGAVWSCCLDANALFSASGSADF 83 (264)
Q Consensus 6 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~--~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~ 83 (264)
|+.|.+.+.|..+|.+++|+| +|++|++|+.|+.|++|+..++ +.+..+.+|.+.|.+++|+|++.++++++.|+
T Consensus 1 m~~~~~~~~~~~~v~~~~~s~---~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~ 77 (377)
T 3dwl_C 1 MATSQVLHILPKPSYEHAFNS---QRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDR 77 (377)
T ss_dssp -CCEEEEEECSSCCSCCEECS---SSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTS
T ss_pred CCcceeEecCCCcEEEEEECC---CCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCC
Confidence 356777778899999999996 8999999999999999999988 67788999999999999999999999999999
Q ss_pred eEEEEeCCCCc---EEE-EeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCC--CCeEecc-CCCCeEEEEEecC
Q 024676 84 TAKLWDALTGD---EKH-SFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDA--PPREVGN-SSGSIRTVAWLHS 156 (264)
Q Consensus 84 ~v~iwd~~~~~---~~~-~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~--~~~~~~~-~~~~i~~~~~~~~ 156 (264)
+|++||+.++. ... ...|...|.+++|+|++++|++++.|+.|++||++.++. ....+.. |...+.+++|+|+
T Consensus 78 ~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 157 (377)
T 3dwl_C 78 NAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPN 157 (377)
T ss_dssp SEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTT
T ss_pred eEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCC
Confidence 99999998876 333 345888999999999999999999999999999987653 2344444 8889999999986
Q ss_pred CCeEEEEeeCCCeEEEEECC------------------CCceeEEecCCCCEEEEEEcCCCcEEEE-eCCCcEEEEECCC
Q 024676 157 DQTILSSCTDSGGVRLWDAR------------------SGKIVQTLETKSPVTSAEVSRDGRYITT-ADGSSVKFWDANH 217 (264)
Q Consensus 157 ~~~~~~~~~~d~~v~iwd~~------------------~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~ 217 (264)
+. ++++++.|+.|++||++ +++++..+.+..++.+++|+|++++|++ +.|+.|++||+++
T Consensus 158 ~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~ 236 (377)
T 3dwl_C 158 NV-LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSA 236 (377)
T ss_dssp SS-EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECS
T ss_pred CC-EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 54 66777888999999985 3445555555677999999999987655 5689999999998
Q ss_pred cee----eeEEecCCC-CceeeEcCCCCCEEEEecCCCeEEEEEcC
Q 024676 218 FGL----VKGYNMPCN-TESASLEPKLGNIFIAGGEDMWVHVFDFH 258 (264)
Q Consensus 218 ~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~gs~d~~v~vwd~~ 258 (264)
++. +..+..+.. ...+.+.+ ++++|++|+.|+.+ +|+..
T Consensus 237 ~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 237 PEQPPRALITVKLSQLPLRSLLWAN-ESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp TTSCEEECCCEECSSSCEEEEEEEE-TTEEEEEESSSSEE-EECCC
T ss_pred CCCcceeeEeecCCCCceEEEEEcC-CCCEEEEEcCCcEE-EEEeC
Confidence 876 666665543 45667777 48899999877766 66544
No 45
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=9.4e-37 Score=263.01 Aligned_cols=248 Identities=18% Similarity=0.180 Sum_probs=194.0
Q ss_pred EeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCce--EEeeeCCcCCEEEEEECC-CCcEEEEecCCCeEEE
Q 024676 11 VCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDW--IGTFEGHKGAVWSCCLDA-NALFSASGSADFTAKL 87 (264)
Q Consensus 11 ~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~--~~~~~~H~~~V~~v~~~~-~~~~l~s~s~D~~v~i 87 (264)
...+|...|++|+|+|. ++++||+|+.||.|++||+.+++. ...+.+|.+.|.+++|+| ++.+|+|||.|++|++
T Consensus 114 ~~~~~~~~V~~l~~~P~--~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPT--HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp EEEECSSCEEEEEECSS--CTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred cCCCCCCCEEEEEEeCC--CCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 44689999999999983 557899999999999999987753 455678999999999997 6889999999999999
Q ss_pred EeCCCCcEEEEeec---CCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEe
Q 024676 88 WDALTGDEKHSFEH---KHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSC 164 (264)
Q Consensus 88 wd~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 164 (264)
||+.++.......+ ...+.+++|+|++++|++|+.|+.|++||++... ...+..|...|.+++|+|.+..+++++
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~--~~~~~~h~~~v~~v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE--LWNLRMHKKKVTHVALNPCCDWFLATA 269 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB--CCCSBCCSSCEEEEEECTTCSSEEEEE
T ss_pred eeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce--eEEEecccceEEeeeecCCCceEEEEe
Confidence 99987654433332 2357789999999999999999999999997533 233446788999999999888899999
Q ss_pred eCCCeEEEEECCCCceeEEe----cCCCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEecCC-------CCce
Q 024676 165 TDSGGVRLWDARSGKIVQTL----ETKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPC-------NTES 232 (264)
Q Consensus 165 ~~d~~v~iwd~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~-------~~~~ 232 (264)
+.|+.|+|||+++.+....+ .+..+|.+++|+|+|.+|++ +.|+.|++||+++++....+..+. ....
T Consensus 270 s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (435)
T 4e54_B 270 SVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIK 349 (435)
T ss_dssp ETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCB
T ss_pred cCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEE
Confidence 99999999999987644322 35578999999999988765 568999999999887765553321 1223
Q ss_pred eeEcCCCCCEEEEe------------cCCCeEEEEEcCcceee
Q 024676 233 ASLEPKLGNIFIAG------------GEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 233 ~~~~~~~~~~~~~g------------s~d~~v~vwd~~~g~~i 263 (264)
..+.++ +.+++++ ..++.|++||..+|+.+
T Consensus 350 ~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~ 391 (435)
T 4e54_B 350 AAWHPR-YNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMM 391 (435)
T ss_dssp CEECSS-SSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEE
T ss_pred EEEcCC-CCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEE
Confidence 344443 3344443 34568999999998764
No 46
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-36 Score=258.92 Aligned_cols=251 Identities=17% Similarity=0.258 Sum_probs=208.2
Q ss_pred ceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCC----CceEEeeeCCcCCEEEEEECCC-CcEEEEecCCC
Q 024676 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET----GDWIGTFEGHKGAVWSCCLDAN-ALFSASGSADF 83 (264)
Q Consensus 9 ~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~----~~~~~~~~~H~~~V~~v~~~~~-~~~l~s~s~D~ 83 (264)
+....+|..+|.+++|+| ++++|++|+.|+.+++|+..+ .+.+..+.+|.+.|.+++|+|+ +.++++++.|+
T Consensus 60 ~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg 136 (416)
T 2pm9_A 60 PIASLQVDSKFNDLDWSH---NNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNG 136 (416)
T ss_dssp CSCCCCCSSCEEEEEECS---SSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSS
T ss_pred EEEEEecCCceEEEEECC---CCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCC
Confidence 333457999999999986 899999999999999999987 3578889999999999999998 89999999999
Q ss_pred eEEEEeCCCCc------EEEE----eecCCeEEEEEECCC-CCEEEEeeCCCcEEEeeCCCCCCCCeEeccC-----CCC
Q 024676 84 TAKLWDALTGD------EKHS----FEHKHIVRACAFSED-THLLLTGGFEKILRIFDLNRPDAPPREVGNS-----SGS 147 (264)
Q Consensus 84 ~v~iwd~~~~~------~~~~----~~~~~~v~~~~~~~~-~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~-----~~~ 147 (264)
+|++||+.++. .... ..|...|.+++|+|+ +.++++++.|+.|++||+++++......... ...
T Consensus 137 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 216 (416)
T 2pm9_A 137 EIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQ 216 (416)
T ss_dssp CEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCC
T ss_pred eEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCc
Confidence 99999998876 3222 247788999999998 7899999999999999998765432222221 678
Q ss_pred eEEEEEecCCCeEEEEeeCCC---eEEEEECCCC-ceeEEec--CCCCEEEEEEcC-CCcEEEE-eCCCcEEEEECCCce
Q 024676 148 IRTVAWLHSDQTILSSCTDSG---GVRLWDARSG-KIVQTLE--TKSPVTSAEVSR-DGRYITT-ADGSSVKFWDANHFG 219 (264)
Q Consensus 148 i~~~~~~~~~~~~~~~~~~d~---~v~iwd~~~~-~~~~~~~--~~~~v~~~~~s~-~~~~l~~-~~~~~i~iwd~~~~~ 219 (264)
+.+++|+|++..++++++.|+ .|++||++++ +++..+. +...+.+++|+| ++.++++ +.|+.|++||+++++
T Consensus 217 v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~ 296 (416)
T 2pm9_A 217 LSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE 296 (416)
T ss_dssp EEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCC
T ss_pred eEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc
Confidence 999999998877888888888 9999999986 5555565 557899999999 7876654 568999999999999
Q ss_pred eeeEEecCC-CCceeeEcCCCCCEEEEecCCCeEEEEEcCccee
Q 024676 220 LVKGYNMPC-NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (264)
Q Consensus 220 ~~~~~~~~~-~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~ 262 (264)
.+..+..+. ....+.+.|+.+.+|++++.|+.|++||+.+++.
T Consensus 297 ~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 297 QLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp EEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred cceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCC
Confidence 988887644 4567788886448999999999999999987653
No 47
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=9.1e-35 Score=246.72 Aligned_cols=251 Identities=18% Similarity=0.230 Sum_probs=203.2
Q ss_pred ceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeee-------------CCcCCEEEEEECC-CCc
Q 024676 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFE-------------GHKGAVWSCCLDA-NAL 74 (264)
Q Consensus 9 ~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~-------------~H~~~V~~v~~~~-~~~ 74 (264)
..++.+|.++|.+|+|+| .++++|++|+.|+.|++|+..+++....+. +|.+.|.+++|+| ++.
T Consensus 36 ~~~~~~h~~~v~~~~~s~--~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 113 (408)
T 4a11_B 36 RDVERIHGGGINTLDIEP--VEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG 113 (408)
T ss_dssp EEECCCCSSCEEEEEECT--TTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT
T ss_pred eeeeeccCCcEEEEEEec--CCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc
Confidence 345678999999999995 278899999999999999999886544442 6999999999999 778
Q ss_pred EEEEecCCCeEEEEeCCCCcEEEEeecCCeEEEEEECCCC---CEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEE
Q 024676 75 FSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDT---HLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTV 151 (264)
Q Consensus 75 ~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~ 151 (264)
++++++.|+.|++||+.+++....+.+...+..+.++|.+ .++++++.|+.+++||+++++.. ..+..+.+.+.++
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~v~~~ 192 (408)
T 4a11_B 114 MFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCS-HILQGHRQEILAV 192 (408)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCC-EEECCCCSCEEEE
T ss_pred EEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCccee-eeecCCCCcEEEE
Confidence 9999999999999999999998999899999999999854 49999999999999999877543 4555678899999
Q ss_pred EEecCCCeEEEEeeCCCeEEEEECCCCc-eeEEe----------------cCCCCEEEEEEcCCCcEEEE-eCCCcEEEE
Q 024676 152 AWLHSDQTILSSCTDSGGVRLWDARSGK-IVQTL----------------ETKSPVTSAEVSRDGRYITT-ADGSSVKFW 213 (264)
Q Consensus 152 ~~~~~~~~~~~~~~~d~~v~iwd~~~~~-~~~~~----------------~~~~~v~~~~~s~~~~~l~~-~~~~~i~iw 213 (264)
+|.|++..++++++.|+.|++||+++++ ++..+ .+..++.+++|+|+++++++ +.|+.|++|
T Consensus 193 ~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vw 272 (408)
T 4a11_B 193 SWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLW 272 (408)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEE
Confidence 9999888788888999999999998875 33433 23467999999999987665 568899999
Q ss_pred ECCCcee-----------------------------------------------eeEEecCC-CCceeeEcCCCCCEEEE
Q 024676 214 DANHFGL-----------------------------------------------VKGYNMPC-NTESASLEPKLGNIFIA 245 (264)
Q Consensus 214 d~~~~~~-----------------------------------------------~~~~~~~~-~~~~~~~~~~~~~~~~~ 245 (264)
|+++++. +..+..+. ....+.+.+ ++.+|++
T Consensus 273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s 351 (408)
T 4a11_B 273 NSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQS-NFQELYS 351 (408)
T ss_dssp ETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEET-TTTEEEE
T ss_pred ECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcC-CCCEEEE
Confidence 9876432 22333222 234566776 4899999
Q ss_pred ecCCCeEEEEEcCcceee
Q 024676 246 GGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 246 gs~d~~v~vwd~~~g~~i 263 (264)
|+.|+.|++||+.+++++
T Consensus 352 ~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 352 GSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp EETTSCEEEEEECC----
T ss_pred ECCCCeEEEEeCCCCCcc
Confidence 999999999999988764
No 48
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.6e-35 Score=248.86 Aligned_cols=244 Identities=12% Similarity=0.140 Sum_probs=205.0
Q ss_pred eEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCc--eEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEE
Q 024676 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDANALFSASGSADFTAKL 87 (264)
Q Consensus 10 ~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~--~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~i 87 (264)
.++..|.++|.+++|+| +|++|++|+.|+.+++|+..+++ .+..+.+|.+.|.+++|+|++.++++++.|+.|++
T Consensus 2 ~~~~~~~~~i~~~~~s~---~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~v 78 (372)
T 1k8k_C 2 AYHSFLVEPISCHAWNK---DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYV 78 (372)
T ss_dssp CEEESCSSCCCEEEECT---TSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred ceecccCCCeEEEEECC---CCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEE
Confidence 35567999999999996 89999999999999999999887 78899999999999999999999999999999999
Q ss_pred EeCCCCcEEEE---eecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCC---CCeEeccCCCCeEEEEEecCCCeEE
Q 024676 88 WDALTGDEKHS---FEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDA---PPREVGNSSGSIRTVAWLHSDQTIL 161 (264)
Q Consensus 88 wd~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~ 161 (264)
||+.+++.... ..|...|.+++|+|+++++++++.|+.+++||++.... .......+...+.+++|.|++. ++
T Consensus 79 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l 157 (372)
T 1k8k_C 79 WTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV-LL 157 (372)
T ss_dssp EEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSS-EE
T ss_pred EECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCC-EE
Confidence 99988864444 34788999999999999999999999999999986653 1222245678999999998655 56
Q ss_pred EEeeCCCeEEEEECC------------------CCceeEEec-CCCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceee
Q 024676 162 SSCTDSGGVRLWDAR------------------SGKIVQTLE-TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLV 221 (264)
Q Consensus 162 ~~~~~d~~v~iwd~~------------------~~~~~~~~~-~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~ 221 (264)
++++.|+.|++||++ +++.+..+. +..++.+++|+|++.++++ +.|+.|++||+++++.+
T Consensus 158 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 158 AAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAV 237 (372)
T ss_dssp EEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEE
T ss_pred EEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCcee
Confidence 677788999999954 677777775 4567999999999987665 56899999999999988
Q ss_pred eEEecCC-CCceeeEcCCCCCEEEEecCCCeEEEEEcCc
Q 024676 222 KGYNMPC-NTESASLEPKLGNIFIAGGEDMWVHVFDFHT 259 (264)
Q Consensus 222 ~~~~~~~-~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~ 259 (264)
..+..+. ....+.+.+ ++.++++| .|+.|++|++.+
T Consensus 238 ~~~~~~~~~v~~~~~~~-~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 238 ATLASETLPLLAVTFIT-ESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEECSSCCEEEEEEEE-TTEEEEEE-TTSSCEEEEEET
T ss_pred EEEccCCCCeEEEEEec-CCCEEEEE-eCCeEEEEEccC
Confidence 8887654 345667776 47777777 899999999877
No 49
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=7.5e-36 Score=250.81 Aligned_cols=252 Identities=15% Similarity=0.138 Sum_probs=202.9
Q ss_pred cceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEe--eeCCcCCEEEEEECCCCcEEEEecCCCeE
Q 024676 8 VPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGT--FEGHKGAVWSCCLDANALFSASGSADFTA 85 (264)
Q Consensus 8 ~~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~--~~~H~~~V~~v~~~~~~~~l~s~s~D~~v 85 (264)
....+.+|..+|.+++|+| ++++|++++.|+.+++|+..+++.... +.+|...|.+++|+|++.++++++.|+.|
T Consensus 44 ~~~~~~~h~~~v~~~~~~~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v 120 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAP---DSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVI 120 (372)
T ss_dssp EEEEEECCSSCEEEEEEET---TTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSE
T ss_pred eeeeecCCCCcccEEEEeC---CCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEE
Confidence 4556679999999999996 889999999999999999988875444 46799999999999999999999999999
Q ss_pred EEEeCCCCcE---EEEe--ecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCC-----------------CCCCeEecc
Q 024676 86 KLWDALTGDE---KHSF--EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRP-----------------DAPPREVGN 143 (264)
Q Consensus 86 ~iwd~~~~~~---~~~~--~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~-----------------~~~~~~~~~ 143 (264)
++||+..+.. ...+ .|...|.+++|+|+++++++++.|+.+++||++.. ......+..
T Consensus 121 ~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (372)
T 1k8k_C 121 SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS 200 (372)
T ss_dssp EEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC
T ss_pred EEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCC
Confidence 9999988762 2222 36788999999999999999999999999996421 112233345
Q ss_pred CCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEecCC-CCEEEEEEcCCCcEEEEeCCCcEEEEECCC--ce-
Q 024676 144 SSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK-SPVTSAEVSRDGRYITTADGSSVKFWDANH--FG- 219 (264)
Q Consensus 144 ~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~--~~- 219 (264)
+.+.+.+++|+|++. ++++++.|+.|++||+++++++..+..+ .++.+++|+|++++++++.++.|++||++. +.
T Consensus 201 ~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~ 279 (372)
T 1k8k_C 201 SCGWVHGVCFSANGS-RVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKL 279 (372)
T ss_dssp CSSCEEEEEECSSSS-EEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEE
T ss_pred CCCeEEEEEECCCCC-EEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceE
Confidence 778899999998665 5667778899999999999988887654 579999999999999988999999999977 32
Q ss_pred -ee------------------------------------eEEe-cCC-CCceeeEcCCCC---CEEEEecCCCeEEEEEc
Q 024676 220 -LV------------------------------------KGYN-MPC-NTESASLEPKLG---NIFIAGGEDMWVHVFDF 257 (264)
Q Consensus 220 -~~------------------------------------~~~~-~~~-~~~~~~~~~~~~---~~~~~gs~d~~v~vwd~ 257 (264)
.+ ..+. .+. ....+.+.++++ .+|++||.|+.|++||+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~ 359 (372)
T 1k8k_C 280 SFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV 359 (372)
T ss_dssp EECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEH
T ss_pred EEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEe
Confidence 11 1111 222 233455666666 99999999999999999
Q ss_pred Ccceee
Q 024676 258 HTGEQI 263 (264)
Q Consensus 258 ~~g~~i 263 (264)
.+++++
T Consensus 360 ~~~~~~ 365 (372)
T 1k8k_C 360 RSLESA 365 (372)
T ss_dssp HHHHHH
T ss_pred cChhHh
Confidence 887653
No 50
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.2e-35 Score=246.47 Aligned_cols=247 Identities=18% Similarity=0.257 Sum_probs=196.6
Q ss_pred EeeccCCCeeeeEeccCCCCC-eEEEEEeC---CCCcEEEeCCCCceEEee-eCCcCCEEEEEECCC---CcEEEEecCC
Q 024676 11 VCHGHSRPVVDLFYSPITPDG-FFLVSASK---DSSPMLRNGETGDWIGTF-EGHKGAVWSCCLDAN---ALFSASGSAD 82 (264)
Q Consensus 11 ~~~~h~~~v~~~~~~~~~~~g-~~l~t~s~---d~~v~i~~~~~~~~~~~~-~~H~~~V~~v~~~~~---~~~l~s~s~D 82 (264)
+..+|..+|.+|+|+| ++ .++++|+. |+.+++|+..+++..... .+|.++|.+++|+|+ +.++++|+.|
T Consensus 13 ~~~~h~~~v~~~~~~p---~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d 89 (357)
T 3i2n_A 13 IQKGFNYTVFDCKWVP---CSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG 89 (357)
T ss_dssp EEEECSSCEEEEEECT---TSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT
T ss_pred hccCCCCceEEEEEcC---CCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC
Confidence 3468999999999997 66 56667776 999999999998865443 379999999999998 6999999999
Q ss_pred CeEEEEeCCCCc-EEEEe-ecCCeEEEEE------ECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCC----CeEE
Q 024676 83 FTAKLWDALTGD-EKHSF-EHKHIVRACA------FSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSG----SIRT 150 (264)
Q Consensus 83 ~~v~iwd~~~~~-~~~~~-~~~~~v~~~~------~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~----~i~~ 150 (264)
+.|++||+.++. ....+ .|...|.++. |+|++++|++++.|+.+++||++.++........+.+ .+.+
T Consensus 90 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~ 169 (357)
T 3i2n_A 90 GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWT 169 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEE
T ss_pred CeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEE
Confidence 999999999886 55555 4888999995 4788999999999999999999887644454433333 7888
Q ss_pred EEEe---cCCCeEEEEeeCCCeEEEEECCCCceeEEecCCCCEEEEEEcC---CCcEEE-EeCCCcEEEEECCCceeeeE
Q 024676 151 VAWL---HSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSR---DGRYIT-TADGSSVKFWDANHFGLVKG 223 (264)
Q Consensus 151 ~~~~---~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~-~~~~~~i~iwd~~~~~~~~~ 223 (264)
+++. ++++.++++++.|+.|++||+++++......+..++.+++|+| ++.+++ ++.++.|++||+++.+.+..
T Consensus 170 ~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 249 (357)
T 3i2n_A 170 VAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKG 249 (357)
T ss_dssp EEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTE
T ss_pred EEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccc
Confidence 8842 2455677778888999999999999877777778999999999 777665 45689999999988776655
Q ss_pred Ee-----cC-CCCceeeEcCCCCC-EEEEecCCCeEEEEEcCcce
Q 024676 224 YN-----MP-CNTESASLEPKLGN-IFIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 224 ~~-----~~-~~~~~~~~~~~~~~-~~~~gs~d~~v~vwd~~~g~ 261 (264)
+. .+ .....+.+.|+ +. +|++|+.|+.|++||+.+++
T Consensus 250 ~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 250 FASVSEKAHKSTVWQVRHLPQ-NRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp EEEEEEECCSSCEEEEEEETT-EEEEEEEEETTSEEEEEEEECCS
T ss_pred eeeeccCCCcCCEEEEEECCC-CCcEEEEEeCCCcEEEeecCCCc
Confidence 54 33 34456777775 55 89999999999999987653
No 51
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2e-34 Score=238.66 Aligned_cols=237 Identities=15% Similarity=0.198 Sum_probs=204.4
Q ss_pred ccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCc--eEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCC
Q 024676 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL 91 (264)
Q Consensus 14 ~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~--~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~ 91 (264)
+|..+|.++.|+| ++++|++++.|+.+++|+..+++ ....+.+|...|.+++|+|++.++++++.|+.|++||+.
T Consensus 95 ~~~~~v~~~~~~~---~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~ 171 (337)
T 1gxr_A 95 NRDNYIRSCKLLP---DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH 171 (337)
T ss_dssp CTTSBEEEEEECT---TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCCcEEEEEEcC---CCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC
Confidence 7999999999996 88999999999999999999887 567788999999999999999999999999999999999
Q ss_pred CCcEEEEee-cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeE
Q 024676 92 TGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGV 170 (264)
Q Consensus 92 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v 170 (264)
+++....+. |...+..++|+|+++++++++.|+.+++||+++++.... ..+...+.+++|+|++. ++++++.++.|
T Consensus 172 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~--~~~~~~v~~~~~s~~~~-~l~~~~~~~~i 248 (337)
T 1gxr_A 172 NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQ--HDFTSQIFSLGYCPTGE-WLAVGMESSNV 248 (337)
T ss_dssp TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE--EECSSCEEEEEECTTSS-EEEEEETTSCE
T ss_pred CCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEee--ecCCCceEEEEECCCCC-EEEEEcCCCcE
Confidence 998777775 788999999999999999999999999999987653322 24567899999988765 45566778999
Q ss_pred EEEECCCCceeEEecCCCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEecCCCCceeeEcCCCCCEEEEecCC
Q 024676 171 RLWDARSGKIVQTLETKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGED 249 (264)
Q Consensus 171 ~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d 249 (264)
++||+++++......+..++.+++|+|+++++++ +.++.|++||+++++.+...........+.+.+ ++.+|++++.|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d 327 (337)
T 1gxr_A 249 EVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISV-DDKYIVTGSGD 327 (337)
T ss_dssp EEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECT-TSCEEEEEETT
T ss_pred EEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECC-CCCEEEEecCC
Confidence 9999999887665566778999999999987765 568999999999998876666566666777887 48899999999
Q ss_pred CeEEEEEc
Q 024676 250 MWVHVFDF 257 (264)
Q Consensus 250 ~~v~vwd~ 257 (264)
+.|++||+
T Consensus 328 g~i~iw~~ 335 (337)
T 1gxr_A 328 KKATVYEV 335 (337)
T ss_dssp SCEEEEEE
T ss_pred CeEEEEEE
Confidence 99999996
No 52
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=7e-36 Score=250.11 Aligned_cols=241 Identities=15% Similarity=0.179 Sum_probs=197.7
Q ss_pred cCCCeeeeEeccCC-CCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECC-CCcEEEEecCCCeEEEEeCCC
Q 024676 15 HSRPVVDLFYSPIT-PDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDA-NALFSASGSADFTAKLWDALT 92 (264)
Q Consensus 15 h~~~v~~~~~~~~~-~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~-~~~~l~s~s~D~~v~iwd~~~ 92 (264)
|...|.+++|+|.. ++|++|++|+.|+.|++|+..+++.+..+.+|.+.|.+++|+| ++.++++|+.|++|++||+.+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 77889999999843 2278999999999999999999999999999999999999999 899999999999999999999
Q ss_pred CcEEEEe----ecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCC---------------------------eEe
Q 024676 93 GDEKHSF----EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPP---------------------------REV 141 (264)
Q Consensus 93 ~~~~~~~----~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~---------------------------~~~ 141 (264)
++....+ .|...|.+++|+|++++|++++.|+.|++||+++++... ...
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTR 227 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEEC
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccc
Confidence 9888876 588899999999999999999999999999997643211 011
Q ss_pred ccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCce--------------eEEec-CCCCEEEEEEcCC--CcEEEE
Q 024676 142 GNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI--------------VQTLE-TKSPVTSAEVSRD--GRYITT 204 (264)
Q Consensus 142 ~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~--------------~~~~~-~~~~v~~~~~s~~--~~~l~~ 204 (264)
..+...+.+++|. + .++++++.|+.|++||+++++. +..+. +..++.+++++|+ +++|++
T Consensus 228 ~~~~~~v~~~~~~--~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~ 304 (366)
T 3k26_A 228 DIHRNYVDCVRWL--G-DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLAL 304 (366)
T ss_dssp SSCSSCCCEEEEE--T-TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEE
T ss_pred cCCcceEEEEEEc--C-CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEE
Confidence 1267789999987 3 3677778889999999988654 44443 3456888999999 888876
Q ss_pred e-CCCcEEEEECCCceee----eEEecC---CCCceeeEcCCCCCEEEEecCCCeEEEEEcCc
Q 024676 205 A-DGSSVKFWDANHFGLV----KGYNMP---CNTESASLEPKLGNIFIAGGEDMWVHVFDFHT 259 (264)
Q Consensus 205 ~-~~~~i~iwd~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~ 259 (264)
+ .++.|++||+++++.. ..+..+ .....+.+.+ .+.+|++|+.|+.|++||+.+
T Consensus 305 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 305 GNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSR-DSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp ECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECT-TSSEEEEEETTSEEEEEEC--
T ss_pred EecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCC-CCCeEEEEeCCCEEEEEEecC
Confidence 5 5799999999987543 355443 3455677777 589999999999999999853
No 53
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.8e-34 Score=248.90 Aligned_cols=243 Identities=19% Similarity=0.328 Sum_probs=200.9
Q ss_pred cceEeeccCCCe-eeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEE
Q 024676 8 VPLVCHGHSRPV-VDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAK 86 (264)
Q Consensus 8 ~~~~~~~h~~~v-~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~ 86 (264)
....+.+|..+| .++.++ +++|++|+.|+.|++||..+++.+..+.+|.+.|.+++|++++ ++++|+.|++|+
T Consensus 113 ~~~~l~~h~~~v~~~~~~~-----~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~ 186 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQFE-----DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVR 186 (464)
T ss_dssp EEEEEECCSSSCEEEEEEE-----TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEE
T ss_pred ceEEEcCCCCCcEEEEEEC-----CCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEE
Confidence 445678999885 566664 4699999999999999999999999999999999999999988 889999999999
Q ss_pred EEeCCCCcEEEEee-cCCeEEEEEEC--CCCCEEEEeeCCCcEEEeeCCCCCCCC----------------------eEe
Q 024676 87 LWDALTGDEKHSFE-HKHIVRACAFS--EDTHLLLTGGFEKILRIFDLNRPDAPP----------------------REV 141 (264)
Q Consensus 87 iwd~~~~~~~~~~~-~~~~v~~~~~~--~~~~~l~s~~~d~~i~~~d~~~~~~~~----------------------~~~ 141 (264)
+||+.+++....+. |..+|.+++++ ++++++++++.|+.+++||+++..... ...
T Consensus 187 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (464)
T 3v7d_B 187 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL 266 (464)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEE
T ss_pred EEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEc
Confidence 99999998888876 88899999998 577899999999999999998765331 123
Q ss_pred ccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEec-CCCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCce
Q 024676 142 GNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLE-TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFG 219 (264)
Q Consensus 142 ~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~ 219 (264)
..+...+.++. ++ +.++++++.|+.|++||+++++++..+. +..++.+++++|++.++++ +.|+.|++||+++++
T Consensus 267 ~~~~~~v~~~~--~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 267 RGHMASVRTVS--GH-GNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE 343 (464)
T ss_dssp CCCSSCEEEEE--EE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred cCccceEEEEc--CC-CCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence 34556666653 33 4467777888999999999999988886 4567999999999987655 568999999999999
Q ss_pred eeeEEecCCCCc-eeeEcCCCCCEEEEecCCCeEEEEEcCccee
Q 024676 220 LVKGYNMPCNTE-SASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (264)
Q Consensus 220 ~~~~~~~~~~~~-~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~ 262 (264)
++..+..+.... .+.+. +.++++|+.|+.|++||+.+++.
T Consensus 344 ~~~~~~~h~~~v~~~~~~---~~~l~s~s~dg~v~vwd~~~~~~ 384 (464)
T 3v7d_B 344 LMYTLQGHTALVGLLRLS---DKFLVSAAADGSIRGWDANDYSR 384 (464)
T ss_dssp EEEEECCCSSCEEEEEEC---SSEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEEeCCCCcEEEEEEc---CCEEEEEeCCCcEEEEECCCCce
Confidence 998887655433 34443 68999999999999999987764
No 54
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-35 Score=255.11 Aligned_cols=244 Identities=14% Similarity=0.162 Sum_probs=192.1
Q ss_pred eccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCC---Cc---eEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEE
Q 024676 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET---GD---WIGTFEGHKGAVWSCCLDANALFSASGSADFTAK 86 (264)
Q Consensus 13 ~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~---~~---~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~ 86 (264)
.+|.++|.+|+|+| .++++|++|+.|++|++|+..+ +. ....+ +|.+.|.+++|+|++.++++|+.|++|+
T Consensus 60 ~~h~~~V~~~~~s~--~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~ 136 (437)
T 3gre_A 60 ENEPNSITSSAVSP--GETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQII 136 (437)
T ss_dssp TTTTSCEEEEEEEC--SSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred cCCCCceEEEEECC--CCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEE
Confidence 68999999999995 2788999999999999999876 43 22233 4999999999999999999999999999
Q ss_pred EEeCC---CCcEEEEee-------------cCCeEEEEE--ECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEecc-CCCC
Q 024676 87 LWDAL---TGDEKHSFE-------------HKHIVRACA--FSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGN-SSGS 147 (264)
Q Consensus 87 iwd~~---~~~~~~~~~-------------~~~~v~~~~--~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~-~~~~ 147 (264)
+||+. ++....... +...+.++. ++++++++++++.|+.|++||+++++........ |.+.
T Consensus 137 vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~ 216 (437)
T 3gre_A 137 VLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGA 216 (437)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCC
T ss_pred EEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCc
Confidence 99984 454433322 334455555 5678999999999999999999877654443332 6789
Q ss_pred eEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEe--cCCCCEEEEEEc----CCCcEEEEe-CCCcEEEEECCCcee
Q 024676 148 IRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTL--ETKSPVTSAEVS----RDGRYITTA-DGSSVKFWDANHFGL 220 (264)
Q Consensus 148 i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~--~~~~~v~~~~~s----~~~~~l~~~-~~~~i~iwd~~~~~~ 220 (264)
+.+++|+|++ .++++++.|+.|++||+++++++..+ .+..+|.+++++ |++.+++++ .|+.|++||++++++
T Consensus 217 v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 295 (437)
T 3gre_A 217 VSSICIDEEC-CVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHC 295 (437)
T ss_dssp EEEEEECTTS-CEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEE
T ss_pred eEEEEECCCC-CEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcE
Confidence 9999998764 56777788899999999999998877 445679999665 467677665 578999999999998
Q ss_pred eeEEecCCC---------------------------CceeeEcCCCCCEEEEecCCCeEEEEEcCccee
Q 024676 221 VKGYNMPCN---------------------------TESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (264)
Q Consensus 221 ~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~ 262 (264)
+..+..+.. ...+++. .+.+|++|+.|+.|++||+.+++.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~--~~~~l~s~~~d~~i~~wd~~~~~~ 362 (437)
T 3gre_A 296 QYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS--NDKILLTDEATSSIVMFSLNELSS 362 (437)
T ss_dssp EEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE--TTEEEEEEGGGTEEEEEETTCGGG
T ss_pred EEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC--CceEEEecCCCCeEEEEECCCccc
Confidence 888764321 1223444 358999999999999999998874
No 55
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.5e-34 Score=256.83 Aligned_cols=236 Identities=28% Similarity=0.448 Sum_probs=198.4
Q ss_pred eEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEe
Q 024676 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (264)
Q Consensus 10 ~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd 89 (264)
..+.+|..+|.+++|+| +|++|++|+.|+.+++|+. +++.+..+.+|...|.+++|+|++.++++++.|++|++||
T Consensus 338 ~~~~~~~~~v~~~~~s~---~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~ 413 (577)
T 2ymu_A 338 QTLTGHSSSVWGVAFSP---DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN 413 (577)
T ss_dssp EEECCCSSCEEEEEECT---TSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEeCCCCCEEEEEECC---CCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 34578999999999996 8999999999999999995 5778889999999999999999999999999999999999
Q ss_pred CCCCcEEEEe-ecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCC
Q 024676 90 ALTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSG 168 (264)
Q Consensus 90 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~ 168 (264)
.. ++.+..+ .|...|..++|+|++++|++++.|+.+++||+.. + .......|...+.+++|+|++. ++++++.|+
T Consensus 414 ~~-~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~-~-~~~~~~~~~~~v~~~~~spd~~-~las~~~d~ 489 (577)
T 2ymu_A 414 RN-GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG-Q-LLQTLTGHSSSVRGVAFSPDGQ-TIASASDDK 489 (577)
T ss_dssp TT-CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS-C-EEEEEECCSSCEEEEEECTTSC-EEEEEETTS
T ss_pred CC-CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC-C-EEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCC
Confidence 64 4444444 5888999999999999999999999999999743 2 2344556788999999998655 566778889
Q ss_pred eEEEEECCCCceeEEecC-CCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEecCCC-CceeeEcCCCCCEEEE
Q 024676 169 GVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCN-TESASLEPKLGNIFIA 245 (264)
Q Consensus 169 ~v~iwd~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 245 (264)
.|++||. +++++..+.. ..+|++++|+|++++|++ +.|+.|++||. +++++..+..+.. ...+.|.| ++++|++
T Consensus 490 ~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~-dg~~l~s 566 (577)
T 2ymu_A 490 TVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSP-DGQTIAS 566 (577)
T ss_dssp EEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECT-TSSCEEE
T ss_pred EEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcC-CCCEEEE
Confidence 9999995 6777777754 567999999999987765 56899999996 5677788876544 45667777 5899999
Q ss_pred ecCCCeEEEEE
Q 024676 246 GGEDMWVHVFD 256 (264)
Q Consensus 246 gs~d~~v~vwd 256 (264)
+|.|++|++||
T Consensus 567 ~~~D~~i~~Wd 577 (577)
T 2ymu_A 567 ASSDKTVKLWN 577 (577)
T ss_dssp EETTSCEEEEC
T ss_pred EeCCCEEEEeC
Confidence 99999999997
No 56
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=8.2e-35 Score=248.77 Aligned_cols=238 Identities=12% Similarity=0.117 Sum_probs=193.4
Q ss_pred eeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEEE
Q 024676 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHS 98 (264)
Q Consensus 19 v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~ 98 (264)
+....|+ +++++|++|+.|+.+++|+..+++.+..+.+|.+.|.+++|+|++.++++|+.|++|++||+.+++....
T Consensus 100 ~~~~~~~---~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~ 176 (420)
T 3vl1_A 100 TAVDTAK---LQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRT 176 (420)
T ss_dssp EEEEEEC---SSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEE
T ss_pred eEEEEEe---cCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceE
Confidence 3344555 4899999999999999999999998888899999999999999999999999999999999999887777
Q ss_pred ee-cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEec--cCCCCeEEEEEec--------------------
Q 024676 99 FE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG--NSSGSIRTVAWLH-------------------- 155 (264)
Q Consensus 99 ~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~--~~~~~i~~~~~~~-------------------- 155 (264)
+. |..+|.+++|+|++++|++++.|+.+++||+++++....... .+...+.++++.+
T Consensus 177 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s 256 (420)
T 3vl1_A 177 LIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFG 256 (420)
T ss_dssp EECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSS
T ss_pred EcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEc
Confidence 65 888999999999999999999999999999987654332221 2445566666532
Q ss_pred CCCeEEEEeeCCCeEEEEECCCCceeEEec--CCCCEEEEEEcCCCc-EEE-EeCCCcEEEEECCCcee-eeEEec-CCC
Q 024676 156 SDQTILSSCTDSGGVRLWDARSGKIVQTLE--TKSPVTSAEVSRDGR-YIT-TADGSSVKFWDANHFGL-VKGYNM-PCN 229 (264)
Q Consensus 156 ~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~--~~~~v~~~~~s~~~~-~l~-~~~~~~i~iwd~~~~~~-~~~~~~-~~~ 229 (264)
+++.++++++.|+.|++||+++++.+..+. +..++.+++|+|++. +++ ++.|+.|++||+++.+. +..+.. +..
T Consensus 257 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~ 336 (420)
T 3vl1_A 257 TYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGT 336 (420)
T ss_dssp CTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTS
T ss_pred CCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCC
Confidence 245577788889999999999998877664 346799999999997 655 46689999999998744 666655 334
Q ss_pred CceeeEcCCCCCEEEEecCCCeEEEEEcCcc
Q 024676 230 TESASLEPKLGNIFIAGGEDMWVHVFDFHTG 260 (264)
Q Consensus 230 ~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g 260 (264)
.....+.+ .+.+|++++.|+.|++||+...
T Consensus 337 ~v~~~~~~-~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 337 PINNVYFA-AGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp CEEEEEEE-TTEEEEEETTTEEEEEEEECCT
T ss_pred CceEEEeC-CCCEEEEecCCccEEEEeccCC
Confidence 44444555 4789999999999999998763
No 57
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.7e-35 Score=238.32 Aligned_cols=244 Identities=17% Similarity=0.255 Sum_probs=203.0
Q ss_pred ecceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEE
Q 024676 7 AVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAK 86 (264)
Q Consensus 7 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~ 86 (264)
.....+.+|.++|.+++| | ++++|++|+.|+.+++|+..+++....+..|.+.|.+++|+|++.++++++.|+.++
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~---~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 84 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-V---DDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMIN 84 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-E---ETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred HHHHHhhCCCCCcEEEEe-c---CCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEE
Confidence 445567899999999999 5 788999999999999999999988888999999999999999999999999999999
Q ss_pred EEeCCCC---cEEEEe-ecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEE
Q 024676 87 LWDALTG---DEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILS 162 (264)
Q Consensus 87 iwd~~~~---~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 162 (264)
+|++... .....+ .|..+|.++.| +++++++++.|+.+++||. .+ .......+...+.++++.+.++..++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~--~~-~~~~~~~~~~~v~~~~~~~~~~~~l~ 159 (313)
T 3odt_A 85 GVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKE--GS-LVYNLQAHNASVWDAKVVSFSENKFL 159 (313)
T ss_dssp EEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEET--TE-EEEEEECCSSCEEEEEEEETTTTEEE
T ss_pred EEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcC--Cc-EEEecccCCCceeEEEEccCCCCEEE
Confidence 9998764 333333 47889999999 5779999999999999992 22 23344567889999999986666778
Q ss_pred EeeCCCeEEEEECCCCceeEEec--CCCCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeeeEEecCC-CCceeeEcCCC
Q 024676 163 SCTDSGGVRLWDARSGKIVQTLE--TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPC-NTESASLEPKL 239 (264)
Q Consensus 163 ~~~~d~~v~iwd~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~ 239 (264)
+++.|+.|++||. ++....+. +...+.+++++|++.+++++.++.|++||+++++.+..+..+. ....+.+.++
T Consensus 160 ~~~~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~- 236 (313)
T 3odt_A 160 TASADKTIKLWQN--DKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPN- 236 (313)
T ss_dssp EEETTSCEEEEET--TEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTT-
T ss_pred EEECCCCEEEEec--CceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecC-
Confidence 8888999999994 44444454 5677999999999997777889999999999999998887544 4456677774
Q ss_pred CCEEEEecCCCeEEEEEcCcceee
Q 024676 240 GNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 240 ~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
+ .|++++.|+.|++||+.+++.+
T Consensus 237 ~-~l~~~~~dg~v~iwd~~~~~~~ 259 (313)
T 3odt_A 237 G-DIVSCGEDRTVRIWSKENGSLK 259 (313)
T ss_dssp S-CEEEEETTSEEEEECTTTCCEE
T ss_pred C-CEEEEecCCEEEEEECCCCcee
Confidence 5 5899999999999999988754
No 58
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-36 Score=266.62 Aligned_cols=244 Identities=14% Similarity=0.107 Sum_probs=187.0
Q ss_pred ccCCCeeeeEeccCCCC------CeEEEE-------------------EeCCCCcEEEeCCCCce----EEeeeCCcCCE
Q 024676 14 GHSRPVVDLFYSPITPD------GFFLVS-------------------ASKDSSPMLRNGETGDW----IGTFEGHKGAV 64 (264)
Q Consensus 14 ~h~~~v~~~~~~~~~~~------g~~l~t-------------------~s~d~~v~i~~~~~~~~----~~~~~~H~~~V 64 (264)
.+.++|.+|+|+|..++ +++||+ ++.|++|++|+..+++. ...+.+|.+.|
T Consensus 131 ~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V 210 (524)
T 2j04_B 131 NVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEV 210 (524)
T ss_dssp ECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSE
T ss_pred ECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcE
Confidence 36788999999985411 156655 56788999999987764 24567789999
Q ss_pred EEEEECCC------CcEEEEecCCCeEEEEeCCCCcEE-----------EEe-ecCCeEEEEEECCCCCEEEEeeCCCcE
Q 024676 65 WSCCLDAN------ALFSASGSADFTAKLWDALTGDEK-----------HSF-EHKHIVRACAFSEDTHLLLTGGFEKIL 126 (264)
Q Consensus 65 ~~v~~~~~------~~~l~s~s~D~~v~iwd~~~~~~~-----------~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i 126 (264)
+.++|+|+ +.+|||++.|++|+|||+..+... ..+ .|..+|.+++|+|++ .|++|+.|++|
T Consensus 211 ~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV 289 (524)
T 2j04_B 211 WDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFV 289 (524)
T ss_dssp EEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEE
T ss_pred EEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEE
Confidence 99999986 579999999999999999766321 133 377899999999864 89999999999
Q ss_pred EEeeCCCCCCCCeEeccCCCCeEEEE-EecCCC-eEEEEeeCCCeEEEEECCCCceeEEecCC---CCEEEEEEcCCCcE
Q 024676 127 RIFDLNRPDAPPREVGNSSGSIRTVA-WLHSDQ-TILSSCTDSGGVRLWDARSGKIVQTLETK---SPVTSAEVSRDGRY 201 (264)
Q Consensus 127 ~~~d~~~~~~~~~~~~~~~~~i~~~~-~~~~~~-~~~~~~~~d~~v~iwd~~~~~~~~~~~~~---~~v~~~~~s~~~~~ 201 (264)
++||++++.........|...|.+++ ..++++ .++++++.|++|+|||++++++...+..+ ..+.+++|+|+++.
T Consensus 290 ~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~ 369 (524)
T 2j04_B 290 AEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYS 369 (524)
T ss_dssp EEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTE
T ss_pred EEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCe
Confidence 99999876555555667888999995 334444 78899999999999999998765544322 24788999999877
Q ss_pred EEE-eCCCcEEEEECCCceeeeEEecCC-CCceeeEcCCCCCEEEEecCCCeEEEEEcCc
Q 024676 202 ITT-ADGSSVKFWDANHFGLVKGYNMPC-NTESASLEPKLGNIFIAGGEDMWVHVFDFHT 259 (264)
Q Consensus 202 l~~-~~~~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~ 259 (264)
+++ +.|++|++||++++.++..+..+. ...+++++| .+.+|++||.|++|++||+..
T Consensus 370 l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp-~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 370 YIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSR-LHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp EEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCS-SCCBCEEEETTTEEECCBSCS
T ss_pred EEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCC-CCCeEEEEECCCEEEEEechH
Confidence 665 557899999999988777766544 345667776 588999999999999999753
No 59
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.8e-35 Score=245.78 Aligned_cols=248 Identities=17% Similarity=0.202 Sum_probs=195.8
Q ss_pred eeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCc-eEEeeeCCcCCEEEEE------ECCCCcEEEEecCCCe
Q 024676 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD-WIGTFEGHKGAVWSCC------LDANALFSASGSADFT 84 (264)
Q Consensus 12 ~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~-~~~~~~~H~~~V~~v~------~~~~~~~l~s~s~D~~ 84 (264)
..+|..+|.+++|+|..++|++|++|+.|+.+++|+..+++ .+..+.+|.+.|.+++ |++++.++++++.|++
T Consensus 61 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~ 140 (357)
T 3i2n_A 61 EIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGT 140 (357)
T ss_dssp EEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSC
T ss_pred eecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCe
Confidence 34899999999999865568999999999999999999987 7889999999999995 5789999999999999
Q ss_pred EEEEeCCCCc-EEEEee-c----CCeEEEEE----ECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEe
Q 024676 85 AKLWDALTGD-EKHSFE-H----KHIVRACA----FSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWL 154 (264)
Q Consensus 85 v~iwd~~~~~-~~~~~~-~----~~~v~~~~----~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~ 154 (264)
|++||+.++. ....+. + ...+..+. |+|+++++++++.|+.|++||+++++. .....+...+.+++|.
T Consensus 141 i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~v~~~~~~ 218 (357)
T 3i2n_A 141 VKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL--RWETNIKNGVCSLEFD 218 (357)
T ss_dssp EEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE--EEEEECSSCEEEEEES
T ss_pred EEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce--eeecCCCCceEEEEcC
Confidence 9999999876 555553 2 23788887 788999999999999999999987654 2334567899999999
Q ss_pred c---CCCeEEEEeeCCCeEEEEECCCCceeEEe------cCCCCEEEEEEcCCCc-EEE-EeCCCcEEEEECCCc-----
Q 024676 155 H---SDQTILSSCTDSGGVRLWDARSGKIVQTL------ETKSPVTSAEVSRDGR-YIT-TADGSSVKFWDANHF----- 218 (264)
Q Consensus 155 ~---~~~~~~~~~~~d~~v~iwd~~~~~~~~~~------~~~~~v~~~~~s~~~~-~l~-~~~~~~i~iwd~~~~----- 218 (264)
| ++. ++++++.|+.|++||+++++.+..+ .+..++.+++|+|++. +++ ++.|+.|++||++..
T Consensus 219 ~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 297 (357)
T 3i2n_A 219 RKDISMN-KLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSK 297 (357)
T ss_dssp CSSSSCC-EEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--
T ss_pred CCCCCCC-EEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccccc
Confidence 8 444 5666778899999999987654333 3567899999999987 554 566899999999753
Q ss_pred --------------eeeeEEecCC-CCceeeEcCCCCCEEE-EecCCCeEEEEEcCcceee
Q 024676 219 --------------GLVKGYNMPC-NTESASLEPKLGNIFI-AGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 219 --------------~~~~~~~~~~-~~~~~~~~~~~~~~~~-~gs~d~~v~vwd~~~g~~i 263 (264)
+.+..+..+. ....+.+.++ +++|+ +|+.|+.|++||+.+.+.|
T Consensus 298 ~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~s~~~d~~i~iw~~~~~~~i 357 (357)
T 3i2n_A 298 KDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPD-KRGLCVCSSFDQTVRVLIVTKLNKI 357 (357)
T ss_dssp CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSS-STTEEEEEETTSEEEEEEECC----
T ss_pred ccCCCCccccccccceeeccccCCCCeeEEEEcCC-CCeEEEEecCCCcEEEEECCCcccC
Confidence 3455555443 3456777775 66666 8999999999999887654
No 60
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.8e-35 Score=251.67 Aligned_cols=244 Identities=16% Similarity=0.212 Sum_probs=195.0
Q ss_pred EeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeC
Q 024676 11 VCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDA 90 (264)
Q Consensus 11 ~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~ 90 (264)
.+.+|..+|.+++|+| ++++|++|+.|+.|++||+.+++.+..+.+|.+.|.+++|+|++.++++++.|++|++||+
T Consensus 134 ~~~~h~~~v~~~~~~~---~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~ 210 (420)
T 3vl1_A 134 IDQAHVSEITKLKFFP---SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWEC 210 (420)
T ss_dssp ETTSSSSCEEEEEECT---TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred ecccccCccEEEEECC---CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeEC
Confidence 3468999999999996 8899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEee----cCCeEEEE---------------------EECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCC
Q 024676 91 LTGDEKHSFE----HKHIVRAC---------------------AFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSS 145 (264)
Q Consensus 91 ~~~~~~~~~~----~~~~v~~~---------------------~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 145 (264)
.+++....+. +...+..+ +|+|+++++++++.|+.|++||+++++........+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 290 (420)
T 3vl1_A 211 GTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFT 290 (420)
T ss_dssp TTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTS
T ss_pred CCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccC
Confidence 9998877775 33345544 4578999999999999999999987765544545577
Q ss_pred CCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCce-eEEec--CCCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceee
Q 024676 146 GSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI-VQTLE--TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLV 221 (264)
Q Consensus 146 ~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~-~~~~~--~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~ 221 (264)
..+.+++|+|++..++++++.|+.|++||+++++. +..+. +..++.++.++ ++.++++ +.|+.|++||+...+..
T Consensus 291 ~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~d~~v~iw~~~~~~~~ 369 (420)
T 3vl1_A 291 CSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFA-AGALFVSSGFDTSIKLDIISDPESE 369 (420)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEE-TTEEEEEETTTEEEEEEEECCTTCC
T ss_pred CCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeC-CCCEEEEecCCccEEEEeccCCCCC
Confidence 89999999998876788888899999999998754 55554 45668888655 5656554 56899999998763211
Q ss_pred ---------eEE-ecCCCCceeeEcCCCCC---EEEEecCCCeEEEEEcCc
Q 024676 222 ---------KGY-NMPCNTESASLEPKLGN---IFIAGGEDMWVHVFDFHT 259 (264)
Q Consensus 222 ---------~~~-~~~~~~~~~~~~~~~~~---~~~~gs~d~~v~vwd~~~ 259 (264)
..+ .........++.|+ +. .+++.|.++.+++|++..
T Consensus 370 ~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 370 RPAIEFETPTFLVSNDDAVSQFCYVSD-DESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp SCEECTTSCEEECCSSCCCCEEEEECC-SSSSCEEEEEETTTEEEEEESCC
T ss_pred ccceeccCccEEccCCcceEEEEEccC-CCCcceEEEEcCCceEEEEeccC
Confidence 111 12234556777775 55 567777789999999753
No 61
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1e-34 Score=245.65 Aligned_cols=240 Identities=16% Similarity=0.178 Sum_probs=189.6
Q ss_pred eccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeC---CcCCEEEEEECCCCcEEEEecCCCeEEEEe
Q 024676 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEG---HKGAVWSCCLDANALFSASGSADFTAKLWD 89 (264)
Q Consensus 13 ~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~---H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd 89 (264)
.+|...|.+++|+| .++++|++++.|+.+++||+.+ ..+..+.. |...|.+++|+|++.++++|+.|+.|++||
T Consensus 115 ~~h~~~v~~~~~~~--~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 191 (383)
T 3ei3_B 115 MGPGDAITGMKFNQ--FNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLG 191 (383)
T ss_dssp CSTTCBEEEEEEET--TEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEE
T ss_pred CCcCCceeEEEeCC--CCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEE
Confidence 47999999999996 2678999999999999999985 44555544 458899999999999999999999999999
Q ss_pred CCCCcEEEEe-ecCCeEEEEEECCCCC-EEEEeeCCCcEEEeeCCCCCCC--CeEeccCCCCeEEEEEecCCCeEEEEee
Q 024676 90 ALTGDEKHSF-EHKHIVRACAFSEDTH-LLLTGGFEKILRIFDLNRPDAP--PREVGNSSGSIRTVAWLHSDQTILSSCT 165 (264)
Q Consensus 90 ~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~s~~~d~~i~~~d~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 165 (264)
+. +..+..+ .|...|.+++|+|+++ ++++++.|+.|++||+++.+.. ......+...+.+++|+|.++.++++++
T Consensus 192 ~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~ 270 (383)
T 3ei3_B 192 LD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTD 270 (383)
T ss_dssp TT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEE
T ss_pred CC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEc
Confidence 94 5555555 4888999999999998 9999999999999999864321 2222357889999999983444566777
Q ss_pred CCCeEEEEECCCCceeEEecC------------------CCCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeeeEEecC
Q 024676 166 DSGGVRLWDARSGKIVQTLET------------------KSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMP 227 (264)
Q Consensus 166 ~d~~v~iwd~~~~~~~~~~~~------------------~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~ 227 (264)
.|+.|++||+++++....+.. ...+..+.++|++++ +++.|+.|++||+++++.+..+..+
T Consensus 271 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~~~~~~l~~~ 349 (383)
T 3ei3_B 271 QRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDANSGGLVHQLRDP 349 (383)
T ss_dssp SSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETTTCCEEEEECBT
T ss_pred CCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecCCCceeeeecCC
Confidence 889999999998876544431 123445667777777 5556899999999999998888753
Q ss_pred --CCCce-eeEcCCCCCEEEEecCCCeEEEEEcCc
Q 024676 228 --CNTES-ASLEPKLGNIFIAGGEDMWVHVFDFHT 259 (264)
Q Consensus 228 --~~~~~-~~~~~~~~~~~~~gs~d~~v~vwd~~~ 259 (264)
..... ..+.+ ++.+|++|+ |+.|++||+++
T Consensus 350 ~~~~~~~~~~~s~-~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 350 NAAGIISLNKFSP-TGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp TBCSCCCEEEECT-TSSEEEEEE-TTEEEEEECC-
T ss_pred CCCceEEEEEEec-CccEEEEec-CCcEEEEecCC
Confidence 23333 37777 588999997 99999999864
No 62
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.3e-35 Score=244.35 Aligned_cols=242 Identities=11% Similarity=0.019 Sum_probs=199.5
Q ss_pred eeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCc---eEEeeeCCcCCEEEEEECCCCc-EEEEecCCCeEEE
Q 024676 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD---WIGTFEGHKGAVWSCCLDANAL-FSASGSADFTAKL 87 (264)
Q Consensus 12 ~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~---~~~~~~~H~~~V~~v~~~~~~~-~l~s~s~D~~v~i 87 (264)
..+|.+.|.+++|+| ++++|++++.|+.|++|+..+++ ....+.+|...|.+++|+|++. ++++|+.|+.|++
T Consensus 7 ~~~h~~~v~~~~~s~---~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 7 EQAPKDYISDIKIIP---SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp SSCCSSCEEEEEEEG---GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred ccCCCCcEEEEEEcC---CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 358999999999997 88999999999999999998876 3455668999999999999999 9999999999999
Q ss_pred EeC-CCCcEEEEee--cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCC---------CCCCCeEeccCCCCeEEEEEec
Q 024676 88 WDA-LTGDEKHSFE--HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNR---------PDAPPREVGNSSGSIRTVAWLH 155 (264)
Q Consensus 88 wd~-~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~---------~~~~~~~~~~~~~~i~~~~~~~ 155 (264)
||+ .++....... |...|.+++|+| ++++++++.|+.|++||+++ .+.... . .+...+.+++|.+
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~-~~~~~v~~~~~~~ 160 (342)
T 1yfq_A 84 VDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNN-T-KVKNKIFTMDTNS 160 (342)
T ss_dssp ECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSS-S-SSCCCEEEEEECS
T ss_pred EEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeE-E-eeCCceEEEEecC
Confidence 999 8887655556 889999999999 99999999999999999876 443322 2 2678899999986
Q ss_pred CCCeEEEEeeCCCeEEEEECCC-Ccee---EEecCCCCEEEEEEcC-CCcEEEE-eCCCcEEEEECCCc------eeeeE
Q 024676 156 SDQTILSSCTDSGGVRLWDARS-GKIV---QTLETKSPVTSAEVSR-DGRYITT-ADGSSVKFWDANHF------GLVKG 223 (264)
Q Consensus 156 ~~~~~~~~~~~d~~v~iwd~~~-~~~~---~~~~~~~~v~~~~~s~-~~~~l~~-~~~~~i~iwd~~~~------~~~~~ 223 (264)
+. +++++.|+.|++||+++ ++.. ....+..++.+++++| ++.++++ +.++.|++|+++.. +....
T Consensus 161 ~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 237 (342)
T 1yfq_A 161 SR---LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA 237 (342)
T ss_dssp SE---EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEE
T ss_pred Cc---EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccccccee
Confidence 54 66677889999999998 5532 2334567899999999 8877655 56899999999876 66666
Q ss_pred EecCC----------CCceeeEcCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 224 YNMPC----------NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 224 ~~~~~----------~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
+..+. ....+.+.| .+.+|++|+.|+.|++||+.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 238 FRCHRLNLKDTNLAYPVNSIEFSP-RHKFLYTAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp EECCCCCTTCCSSCCCEEEEEECT-TTCCEEEEETTSCEEEEETTTTEEE
T ss_pred eecccccccccccceeEEEEEEcC-CCCEEEEecCCceEEEEcCccHhHh
Confidence 65542 344567777 5889999999999999999988764
No 63
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.9e-33 Score=231.23 Aligned_cols=249 Identities=15% Similarity=0.236 Sum_probs=207.5
Q ss_pred cceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEE
Q 024676 8 VPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKL 87 (264)
Q Consensus 8 ~~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~i 87 (264)
....+++|...|.+|+|+| +|++|++|+.|++|++|+.++++.++.+.+|...+.++.+ ++..+++++.++.+++
T Consensus 59 ~~~~~~~~~~~V~~v~~~~---~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~ 133 (318)
T 4ggc_A 59 QLLQMEQPGEYISSVAWIK---EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHH 133 (318)
T ss_dssp EEEECCSTTCCEEEEEECT---TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEE
T ss_pred EEEEecCCCCeEEEEEECC---CCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCCceEe
Confidence 3344568999999999996 8999999999999999999999999999999999876655 5678999999999999
Q ss_pred EeCCCCcE-EEE-eecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCC---CeEeccCCCCeEEEEEecCCCeEE-
Q 024676 88 WDALTGDE-KHS-FEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAP---PREVGNSSGSIRTVAWLHSDQTIL- 161 (264)
Q Consensus 88 wd~~~~~~-~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~- 161 (264)
|+...... ... ..|...+..+.++++++++++++.|+.|++||+++++.. ......+.+.+..+++.+.+..++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 213 (318)
T 4ggc_A 134 HDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLA 213 (318)
T ss_dssp EETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEE
T ss_pred eecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEE
Confidence 99887643 333 357889999999999999999999999999999876532 233445677899999988777654
Q ss_pred -EEeeCCCeEEEEECCCCceeEEecCCCCEEEEEEcCCCcEEEE-e--CCCcEEEEECCCceeeeEEecCCC-CceeeEc
Q 024676 162 -SSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITT-A--DGSSVKFWDANHFGLVKGYNMPCN-TESASLE 236 (264)
Q Consensus 162 -~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~--~~~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~ 236 (264)
++++.++.|++||.++............+..+.++|++..+++ + .|+.|++||+++++++..+..+.. ...++++
T Consensus 214 ~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~s 293 (318)
T 4ggc_A 214 TGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMS 293 (318)
T ss_dssp EEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred EEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEc
Confidence 4566789999999999998888888888999999999876543 3 478999999999999999986554 4556777
Q ss_pred CCCCCEEEEecCCCeEEEEEcCccee
Q 024676 237 PKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (264)
Q Consensus 237 ~~~~~~~~~gs~d~~v~vwd~~~g~~ 262 (264)
| ++.+|++||.|++|++||+.+.++
T Consensus 294 p-dg~~l~S~s~D~~v~iWd~~~~dP 318 (318)
T 4ggc_A 294 P-DGATVASAAADETLRLWRCFELDP 318 (318)
T ss_dssp T-TSSCEEEEETTTEEEEECCSCCCC
T ss_pred C-CCCEEEEEecCCeEEEEECCCCCC
Confidence 7 588999999999999999977654
No 64
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4.4e-35 Score=248.53 Aligned_cols=250 Identities=16% Similarity=0.170 Sum_probs=204.0
Q ss_pred cceEeeccCCCeeeeEeccC-CCCC---eEEEEEeCCCCcEEEeCCCCce-----EEeeeCC-----cCCEEEEEEC---
Q 024676 8 VPLVCHGHSRPVVDLFYSPI-TPDG---FFLVSASKDSSPMLRNGETGDW-----IGTFEGH-----KGAVWSCCLD--- 70 (264)
Q Consensus 8 ~~~~~~~h~~~v~~~~~~~~-~~~g---~~l~t~s~d~~v~i~~~~~~~~-----~~~~~~H-----~~~V~~v~~~--- 70 (264)
....+.+|..+|.+++|+|. .++| ++|++++.|+.|++|+..+++. +..+.+| ...|.+++|+
T Consensus 54 ~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 133 (397)
T 1sq9_A 54 KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN 133 (397)
T ss_dssp GEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC
T ss_pred cceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeecc
Confidence 45566799999999999971 1128 9999999999999999998876 7888888 6999999999
Q ss_pred -CCCcE-EEEecCCCeEEEEeCCC------CcEEE-----Eee--------cCCeEEEEEECCCCCEEEEeeCCCcEEEe
Q 024676 71 -ANALF-SASGSADFTAKLWDALT------GDEKH-----SFE--------HKHIVRACAFSEDTHLLLTGGFEKILRIF 129 (264)
Q Consensus 71 -~~~~~-l~s~s~D~~v~iwd~~~------~~~~~-----~~~--------~~~~v~~~~~~~~~~~l~s~~~d~~i~~~ 129 (264)
|++.+ +++++.|+.|++||+.+ +..+. .+. |...+.+++|+|++ ++++++.|+.+++|
T Consensus 134 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~ 212 (397)
T 1sq9_A 134 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQIS 212 (397)
T ss_dssp ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEE
T ss_pred CCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEE
Confidence 99999 99999999999999987 54433 442 67789999999999 99999999999999
Q ss_pred eCCCCCCCCeEecc---C---CCCeEEEEEecCCCeEEEEeeCC---CeEEEEECCCCceeEEec--------------C
Q 024676 130 DLNRPDAPPREVGN---S---SGSIRTVAWLHSDQTILSSCTDS---GGVRLWDARSGKIVQTLE--------------T 186 (264)
Q Consensus 130 d~~~~~~~~~~~~~---~---~~~i~~~~~~~~~~~~~~~~~~d---~~v~iwd~~~~~~~~~~~--------------~ 186 (264)
|+++++.. ..+.. | ...+.+++|+|++. ++++++.| +.|++||+++++.+..+. +
T Consensus 213 d~~~~~~~-~~~~~~~~h~~~~~~i~~i~~~~~~~-~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (397)
T 1sq9_A 213 ELSTLRPL-YNFESQHSMINNSNSIRSVKFSPQGS-LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAH 290 (397)
T ss_dssp ETTTTEEE-EEEECCC---CCCCCEEEEEECSSTT-EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSB
T ss_pred ECCCCcee-EEEeccccccccCCccceEEECCCCC-EEEEEecCCCCceEEEEECCCCcccceeccCccccccccccccc
Confidence 99876533 33334 5 78899999998765 56667778 899999999999888776 4
Q ss_pred CCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEe------cC----------------CCCceeeEcCCCC---
Q 024676 187 KSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYN------MP----------------CNTESASLEPKLG--- 240 (264)
Q Consensus 187 ~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~------~~----------------~~~~~~~~~~~~~--- 240 (264)
..++.+++|+|++++|++ +.|+.|++||+++++.+..+. .+ .....+.+.++ +
T Consensus 291 ~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~-g~~~ 369 (397)
T 1sq9_A 291 SSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKK-GWRS 369 (397)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECT-TTSB
T ss_pred CCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccc-cccc
Confidence 677999999999988765 568999999999999998888 33 34556777775 4
Q ss_pred -------CEEEEecCCCeEEEEEcCcce
Q 024676 241 -------NIFIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 241 -------~~~~~gs~d~~v~vwd~~~g~ 261 (264)
.+|++|+.|+.|++||+.+|+
T Consensus 370 ~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 370 GMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp STTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred cccccccceEEEecCCCcEEEEEcCCCC
Confidence 799999999999999998874
No 65
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.7e-34 Score=241.43 Aligned_cols=236 Identities=21% Similarity=0.310 Sum_probs=201.7
Q ss_pred cCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCc
Q 024676 15 HSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGD 94 (264)
Q Consensus 15 h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~ 94 (264)
|..+|.+++|+| ++++|++|+.|+.+++|+ .+++.+..+.+|...|.+++|+|++.++++++.|+.|++||+.++.
T Consensus 107 ~~~~v~~~~~s~---~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 182 (425)
T 1r5m_A 107 TTNQVTCLAWSH---DGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGT 182 (425)
T ss_dssp -CBCEEEEEECT---TSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTE
T ss_pred CCCceEEEEEcC---CCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCc
Confidence 788999999996 899999999999999999 6678888999999999999999999999999999999999997765
Q ss_pred EEEEe---------------------------------------------------------ecCCeEEEEEECCCCCEE
Q 024676 95 EKHSF---------------------------------------------------------EHKHIVRACAFSEDTHLL 117 (264)
Q Consensus 95 ~~~~~---------------------------------------------------------~~~~~v~~~~~~~~~~~l 117 (264)
....+ .|..+|..++|+|++++|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 262 (425)
T 1r5m_A 183 VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLL 262 (425)
T ss_dssp EEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEE
T ss_pred EEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEE
Confidence 43321 245679999999999999
Q ss_pred EEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEecC-CCCEEEEEEc
Q 024676 118 LTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVS 196 (264)
Q Consensus 118 ~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~s 196 (264)
++++.|+.+++||++.++.. .....+...+.+++|.+++ ++++++.|+.|++||+++++.+..+.. ..++.+++++
T Consensus 263 ~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s 339 (425)
T 1r5m_A 263 LSASDDGTLRIWHGGNGNSQ-NCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRIS 339 (425)
T ss_dssp EEEETTSCEEEECSSSBSCS-EEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEEC
T ss_pred EEEcCCCEEEEEECCCCccc-eEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEc
Confidence 99999999999999876543 4445578899999999876 677778889999999999998887764 5689999999
Q ss_pred CCCcEEEE-eCCCcEEEEECCCce--------------------eeeEEecC--C-CCceeeEcCCCCCEEEEecCCCeE
Q 024676 197 RDGRYITT-ADGSSVKFWDANHFG--------------------LVKGYNMP--C-NTESASLEPKLGNIFIAGGEDMWV 252 (264)
Q Consensus 197 ~~~~~l~~-~~~~~i~iwd~~~~~--------------------~~~~~~~~--~-~~~~~~~~~~~~~~~~~gs~d~~v 252 (264)
|+++++++ +.++.|++||+++.+ .+..+..+ . ....+.+.+ ++++|++++.|+.|
T Consensus 340 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i 418 (425)
T 1r5m_A 340 QDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNC-AGNKISVAYSLQEG 418 (425)
T ss_dssp TTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECT-TSSEEEEEESSSCC
T ss_pred CCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccC-CCceEEEEecCceE
Confidence 99988765 568899999999887 77777765 3 455677777 48899999999999
Q ss_pred EEEEcC
Q 024676 253 HVFDFH 258 (264)
Q Consensus 253 ~vwd~~ 258 (264)
++||+.
T Consensus 419 ~iw~~~ 424 (425)
T 1r5m_A 419 SVVAIP 424 (425)
T ss_dssp EEEECC
T ss_pred EEEeec
Confidence 999985
No 66
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=9.5e-35 Score=243.18 Aligned_cols=248 Identities=20% Similarity=0.237 Sum_probs=196.7
Q ss_pred ceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCC-CceE-EeeeCCcCCEEEEEECCCCcEEEEecCCCeEE
Q 024676 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET-GDWI-GTFEGHKGAVWSCCLDANALFSASGSADFTAK 86 (264)
Q Consensus 9 ~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~-~~~~-~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~ 86 (264)
..++.+|.++|.+|+|+|...+|++|++|+.|+.|++|+..+ +..+ ..+.+|.+.|.+++|+|++.++++++.|++|+
T Consensus 32 ~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~ 111 (368)
T 3mmy_A 32 IEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAK 111 (368)
T ss_dssp EECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred eEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEE
Confidence 344579999999999998433479999999999999999987 5544 78889999999999999999999999999999
Q ss_pred EEeCCCCcEEEEeecCCeEEEEEE--CCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccC--------------------
Q 024676 87 LWDALTGDEKHSFEHKHIVRACAF--SEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNS-------------------- 144 (264)
Q Consensus 87 iwd~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~-------------------- 144 (264)
+||+.++.......|..+|.+++| +|+++++++++.|+.|++||+++++.......+.
T Consensus 112 iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (368)
T 3mmy_A 112 MWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERG 191 (368)
T ss_dssp EEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGC
T ss_pred EEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCc
Confidence 999999998888889999999999 9999999999999999999998765432222111
Q ss_pred --------------------CCCeEEEEEecCCC---eEEEEeeCCCeEEEEECCCC---ceeEEecCCC----------
Q 024676 145 --------------------SGSIRTVAWLHSDQ---TILSSCTDSGGVRLWDARSG---KIVQTLETKS---------- 188 (264)
Q Consensus 145 --------------------~~~i~~~~~~~~~~---~~~~~~~~d~~v~iwd~~~~---~~~~~~~~~~---------- 188 (264)
.....++.+.+... ..+++++.|+.|++||++.. +.+..+..+.
T Consensus 192 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (368)
T 3mmy_A 192 LIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQ 271 (368)
T ss_dssp EEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCE
T ss_pred EEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccc
Confidence 12233333332221 23777788899999999987 4455554432
Q ss_pred ---CEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEecCC-CCceeeEcCCCCCEEEEecCCCeEEEEEc
Q 024676 189 ---PVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPC-NTESASLEPKLGNIFIAGGEDMWVHVFDF 257 (264)
Q Consensus 189 ---~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gs~d~~v~vwd~ 257 (264)
++.+++|+|++++|++ +.|+.|++||+++++++..+..+. ....+.++| ++.+|++||.|+..+.|++
T Consensus 272 ~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 272 DIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNH-NGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp EECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECT-TSSCEEEEECCCSTTCGGG
T ss_pred cccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECC-CCCeEEEEecccccccccc
Confidence 6999999999977655 568999999999999988887644 445677777 5899999999886665553
No 67
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.3e-34 Score=242.17 Aligned_cols=246 Identities=16% Similarity=0.240 Sum_probs=199.8
Q ss_pred eEeeccCCCeeeeEeccCCCCCe-EEEEEeCCCCcEEEeC----CCCc------eEEeeeC----------CcCCEEEEE
Q 024676 10 LVCHGHSRPVVDLFYSPITPDGF-FLVSASKDSSPMLRNG----ETGD------WIGTFEG----------HKGAVWSCC 68 (264)
Q Consensus 10 ~~~~~h~~~v~~~~~~~~~~~g~-~l~t~s~d~~v~i~~~----~~~~------~~~~~~~----------H~~~V~~v~ 68 (264)
+..+.|.++|.+++|+| +|+ +|++|+.|+.+++|+. .+++ ....+.. |.+.|.+++
T Consensus 39 ~~~~~~~~~v~~~~~s~---~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (425)
T 1r5m_A 39 LKEIVKLDNIVSSTWNP---LDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLA 115 (425)
T ss_dssp CEEEEECSCCSEEEECS---SCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEE
T ss_pred eeeeeccCceEEEEECC---CCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEE
Confidence 33467889999999996 888 9999999999999999 8887 4444443 788999999
Q ss_pred ECCCCcEEEEecCCCeEEEEeCCCCcEEEEee-cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCC----------
Q 024676 69 LDANALFSASGSADFTAKLWDALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAP---------- 137 (264)
Q Consensus 69 ~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~---------- 137 (264)
|+|++.++++|+.|+.|++|| .++.....+. |..+|.+++|+|++++|++++.|+.+++||+++++..
T Consensus 116 ~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 194 (425)
T 1r5m_A 116 WSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGG 194 (425)
T ss_dssp ECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC----
T ss_pred EcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCc
Confidence 999999999999999999999 5555555554 8889999999999999999999999999998654321
Q ss_pred ---------------------------------------------CeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEE
Q 024676 138 ---------------------------------------------PREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRL 172 (264)
Q Consensus 138 ---------------------------------------------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~i 172 (264)
......+...+.+++|++++. ++++++.|+.|++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i 273 (425)
T 1r5m_A 195 SSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNK-LLLSASDDGTLRI 273 (425)
T ss_dssp -----------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTT-EEEEEETTSCEEE
T ss_pred cceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCC-EEEEEcCCCEEEE
Confidence 112234567889999998766 5666778899999
Q ss_pred EECCCCceeEEec-CCCCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeeeEEecCC-CCceeeEcCCCCCEEEEecCCC
Q 024676 173 WDARSGKIVQTLE-TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPC-NTESASLEPKLGNIFIAGGEDM 250 (264)
Q Consensus 173 wd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gs~d~ 250 (264)
||+++++.+..+. +..++.++.++|++.+++++.++.|++||+++++.+..+..+. ....+.+.| .+.+|++++.|+
T Consensus 274 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg 352 (425)
T 1r5m_A 274 WHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQ-DGQKYAVAFMDG 352 (425)
T ss_dssp ECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECT-TSSEEEEEETTS
T ss_pred EECCCCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcC-CCCEEEEEECCC
Confidence 9999998888775 5567999999999955566778999999999999888887644 445667777 589999999999
Q ss_pred eEEEEEcCcce
Q 024676 251 WVHVFDFHTGE 261 (264)
Q Consensus 251 ~v~vwd~~~g~ 261 (264)
.|++||+.+++
T Consensus 353 ~i~i~~~~~~~ 363 (425)
T 1r5m_A 353 QVNVYDLKKLN 363 (425)
T ss_dssp CEEEEECHHHH
T ss_pred eEEEEECCCCc
Confidence 99999998776
No 68
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-35 Score=253.04 Aligned_cols=250 Identities=14% Similarity=0.159 Sum_probs=203.4
Q ss_pred cceEeeccCCCeeeeEeccCCCC-CeEEEEEeCCCCcEEEeCCCCc------eE---EeeeCCcCCEEEEEECCC-CcEE
Q 024676 8 VPLVCHGHSRPVVDLFYSPITPD-GFFLVSASKDSSPMLRNGETGD------WI---GTFEGHKGAVWSCCLDAN-ALFS 76 (264)
Q Consensus 8 ~~~~~~~h~~~v~~~~~~~~~~~-g~~l~t~s~d~~v~i~~~~~~~------~~---~~~~~H~~~V~~v~~~~~-~~~l 76 (264)
....+.+|..+|.+++|+| + +++|++++.|+.|++||..+++ .. ..+.+|.+.|.+++|+|+ +.++
T Consensus 105 ~~~~~~~h~~~v~~~~~~~---~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 181 (416)
T 2pm9_A 105 SMARFSNHSSSVKTVKFNA---KQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVF 181 (416)
T ss_dssp EEEECCCSSSCCCEEEECS---SSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEE
T ss_pred chhhccCCccceEEEEEcC---CCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEE
Confidence 3445578999999999997 5 7899999999999999998876 32 234679999999999999 7899
Q ss_pred EEecCCCeEEEEeCCCCcEEEEeec-------CCeEEEEEECCCC-CEEEEeeCCC---cEEEeeCCCCCCCCeEec-cC
Q 024676 77 ASGSADFTAKLWDALTGDEKHSFEH-------KHIVRACAFSEDT-HLLLTGGFEK---ILRIFDLNRPDAPPREVG-NS 144 (264)
Q Consensus 77 ~s~s~D~~v~iwd~~~~~~~~~~~~-------~~~v~~~~~~~~~-~~l~s~~~d~---~i~~~d~~~~~~~~~~~~-~~ 144 (264)
++++.|+.|++||+.+++....+.. ...+.+++|+|++ .++++++.|+ .|++||++++........ .|
T Consensus 182 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~ 261 (416)
T 2pm9_A 182 ASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGH 261 (416)
T ss_dssp EEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCC
T ss_pred EEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCc
Confidence 9999999999999999988777763 6789999999987 6899999998 999999987654445555 67
Q ss_pred CCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEecC-CCCEEEEEEcCCC-cEEEE-eCCCcEEEEECCCceee
Q 024676 145 SGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDG-RYITT-ADGSSVKFWDANHFGLV 221 (264)
Q Consensus 145 ~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~s~~~-~~l~~-~~~~~i~iwd~~~~~~~ 221 (264)
...+.+++|+|.++.++++++.|+.|++||+++++++..+.. ..++.+++|+|++ .++++ +.|+.|++||+.+....
T Consensus 262 ~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 262 QKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNT 341 (416)
T ss_dssp SSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCS
T ss_pred cCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCC
Confidence 889999999985666777888889999999999998888764 5679999999998 67766 45899999999875432
Q ss_pred eEE---------------e---------------------cCCCCceeeEcCCCCCEEEEecCCCeEEEEEcCcce
Q 024676 222 KGY---------------N---------------------MPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 222 ~~~---------------~---------------------~~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~ 261 (264)
... . ........+|.+ +|++|++|+.|+.|++|++.+.+
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~la~~~~d~~v~~w~~~~~~ 416 (416)
T 2pm9_A 342 LDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAF-GGKLVQITPDGKGVSITNPKISG 416 (416)
T ss_dssp SCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEET-TTEEECBCTTSSCBCCBCCCCC-
T ss_pred cccccccccccCCcccccccccccccccccccccccCCccccCCccceEEee-CCeEEEEeCCCCeEEEEEeccCC
Confidence 111 0 011222566777 59999999999999999998753
No 69
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.4e-34 Score=246.73 Aligned_cols=248 Identities=18% Similarity=0.254 Sum_probs=202.0
Q ss_pred eEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCC----------CceEEeeeCCcCCEEEEEECCCCc-EEEE
Q 024676 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET----------GDWIGTFEGHKGAVWSCCLDANAL-FSAS 78 (264)
Q Consensus 10 ~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~----------~~~~~~~~~H~~~V~~v~~~~~~~-~l~s 78 (264)
....+|.++|.+|+|+|. ++++|++++.|+.|++|+..+ .+.+..+.+|.+.|.+++|+|++. ++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~--~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 199 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQ--NACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLS 199 (430)
T ss_dssp EEEEEESSCCSEEEEETT--EEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEE
T ss_pred EEEEcCCCcEEEEEECCC--CCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEE
Confidence 344689999999999971 368999999999999999876 566778899999999999999988 9999
Q ss_pred ecCCCeEEEEeCCCCcE-------EEEe-ecCCeEEEEEECC-CCCEEEEeeCCCcEEEeeCCCCC--CCCeEeccCCCC
Q 024676 79 GSADFTAKLWDALTGDE-------KHSF-EHKHIVRACAFSE-DTHLLLTGGFEKILRIFDLNRPD--APPREVGNSSGS 147 (264)
Q Consensus 79 ~s~D~~v~iwd~~~~~~-------~~~~-~~~~~v~~~~~~~-~~~~l~s~~~d~~i~~~d~~~~~--~~~~~~~~~~~~ 147 (264)
|+.||+|++||+.++.. ...+ .|...|.+++|+| ++.++++++.|+.|++||+++.. ........+...
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 279 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAE 279 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSC
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCC
Confidence 99999999999987421 2223 5788999999999 77899999999999999998763 334455577889
Q ss_pred eEEEEEecCCCeEEEEeeCCCeEEEEECCC-CceeEEec-CCCCEEEEEEcCCCc-EE-EEeCCCcEEEEECCCc-----
Q 024676 148 IRTVAWLHSDQTILSSCTDSGGVRLWDARS-GKIVQTLE-TKSPVTSAEVSRDGR-YI-TTADGSSVKFWDANHF----- 218 (264)
Q Consensus 148 i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~-~~~~~~~~-~~~~v~~~~~s~~~~-~l-~~~~~~~i~iwd~~~~----- 218 (264)
+.+++|+|.+..++++++.|+.|++||+++ .+++..+. +..++.+++|+|++. ++ +++.++.|++||++..
T Consensus 280 v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 359 (430)
T 2xyi_A 280 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS 359 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCC
T ss_pred eEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccC
Confidence 999999998888888899999999999998 45566665 567899999999984 44 4567899999999872
Q ss_pred ---------eeeeEEecCC-CCceeeEcCCCCCEEEEecCCCeEEEEEcCc
Q 024676 219 ---------GLVKGYNMPC-NTESASLEPKLGNIFIAGGEDMWVHVFDFHT 259 (264)
Q Consensus 219 ---------~~~~~~~~~~-~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~ 259 (264)
..+..+..+. .+..+.+.++...++++++.|+.|++|++.+
T Consensus 360 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 360 TEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp HHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred ccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 3344444333 3567788886434999999999999999864
No 70
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-35 Score=268.95 Aligned_cols=248 Identities=19% Similarity=0.270 Sum_probs=198.6
Q ss_pred eEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCC--CCceEEeeeCCcCCEEEEEECCC--CcEEEEecCCCeE
Q 024676 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGE--TGDWIGTFEGHKGAVWSCCLDAN--ALFSASGSADFTA 85 (264)
Q Consensus 10 ~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~--~~~~~~~~~~H~~~V~~v~~~~~--~~~l~s~s~D~~v 85 (264)
.++.||.++|.+++|+| +|++|++|+.||.|++|+.. +++.+..+.+|.++|.+++|+++ +.++++|+.||+|
T Consensus 3 ~~l~gH~~~V~~l~~s~---dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 3 VIANAHNELIHDAVLDY---YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (753)
T ss_dssp -----CCCCEEEECCCS---SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCE
T ss_pred eecccCcceeEEEEECC---CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeE
Confidence 45689999999999996 88999999999999999987 44667889999999999999988 8999999999999
Q ss_pred EEEeCCCCc--EEEEe-ecCCeEEEEEECCC--CCEEEEeeCCCcEEEeeCCCCCC-CCeEeccCCCCeEEEEEecC---
Q 024676 86 KLWDALTGD--EKHSF-EHKHIVRACAFSED--THLLLTGGFEKILRIFDLNRPDA-PPREVGNSSGSIRTVAWLHS--- 156 (264)
Q Consensus 86 ~iwd~~~~~--~~~~~-~~~~~v~~~~~~~~--~~~l~s~~~d~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~~~~~--- 156 (264)
++||+.++. ....+ .|..+|.+++|+|+ ++++++|+.|+.|++||++.+.. .......+...+.+++|.|.
T Consensus 80 ~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~ 159 (753)
T 3jro_A 80 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 159 (753)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC--
T ss_pred EEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccc
Confidence 999999885 33333 48889999999999 99999999999999999987643 33445567889999999985
Q ss_pred ---------CCeEEEEeeCCCeEEEEECCCCc----eeEEec-CCCCEEEEEEcCC---CcEEEE-eCCCcEEEEECCCc
Q 024676 157 ---------DQTILSSCTDSGGVRLWDARSGK----IVQTLE-TKSPVTSAEVSRD---GRYITT-ADGSSVKFWDANHF 218 (264)
Q Consensus 157 ---------~~~~~~~~~~d~~v~iwd~~~~~----~~~~~~-~~~~v~~~~~s~~---~~~l~~-~~~~~i~iwd~~~~ 218 (264)
++.++++++.||.|++||++++. ....+. +..+|.+++|+|+ +.++++ +.|+.|++||+++.
T Consensus 160 ~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 160 EDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp -------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred cccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 35567778888999999998874 344444 4567999999999 777655 56899999999876
Q ss_pred ee-----eeEE-ecCCCCceeeEcCCCCCEEEEecCCCeEEEEEcCcce
Q 024676 219 GL-----VKGY-NMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 219 ~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~ 261 (264)
+. +... ........+.+.| ++.+|++|+.|+.|++||+.++.
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 240 QGPWKKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp SSCCBCCBSSSSCCSSCCCCEEECT-TTCCEEEECSSSCEECCBCCSSS
T ss_pred CCcceeEEeccCCCCCceEEEEEcC-CCCEEEEEcCCCEEEEEecCCCC
Confidence 31 1111 1233445677887 48899999999999999988543
No 71
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-33 Score=230.57 Aligned_cols=242 Identities=21% Similarity=0.296 Sum_probs=200.5
Q ss_pred ceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCC---ceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeE
Q 024676 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG---DWIGTFEGHKGAVWSCCLDANALFSASGSADFTA 85 (264)
Q Consensus 9 ~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~---~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v 85 (264)
.....+|..+|.+++|+| ++++|++|+.|+.+++|++... +.+..+.+|...|.+++| ++.++++++.|+.|
T Consensus 52 ~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i 126 (313)
T 3odt_A 52 GTVVYTGQGFLNSVCYDS---EKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTA 126 (313)
T ss_dssp EEEEEECSSCEEEEEEET---TTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEE
T ss_pred EEEeecCCccEEEEEECC---CCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCE
Confidence 445578999999999996 8899999999999999998654 557788999999999999 57789999999999
Q ss_pred EEEeCCCCcEEEEe-ecCCeEEEEEECC-CCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEE
Q 024676 86 KLWDALTGDEKHSF-EHKHIVRACAFSE-DTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (264)
Q Consensus 86 ~iwd~~~~~~~~~~-~~~~~v~~~~~~~-~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 163 (264)
++|| .+.....+ .|..++..+.+.| +++++++++.|+.+++||... ........+...+.+++|.+++. +++
T Consensus 127 ~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~--~~~~~~~~~~~~i~~~~~~~~~~--~~~ 200 (313)
T 3odt_A 127 KVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK--VIKTFSGIHNDVVRHLAVVDDGH--FIS 200 (313)
T ss_dssp EEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE--EEEEECSSCSSCEEEEEEEETTE--EEE
T ss_pred EEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc--eEEEEeccCcccEEEEEEcCCCe--EEE
Confidence 9999 44444444 4788999999988 899999999999999999432 22222233788899999998665 667
Q ss_pred eeCCCeEEEEECCCCceeEEec-CCCCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeeeEEecCCC-CceeeEcCCCCC
Q 024676 164 CTDSGGVRLWDARSGKIVQTLE-TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPCN-TESASLEPKLGN 241 (264)
Q Consensus 164 ~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 241 (264)
++.|+.|++||+++++.+..+. +..++.+++++|++++++++.++.|++||+++++.+..+..+.. ...+.+.++ ++
T Consensus 201 ~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~-~~ 279 (313)
T 3odt_A 201 CSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSN-GD 279 (313)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTT-SC
T ss_pred ccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccC-CC
Confidence 7788999999999999888886 55679999999999888888899999999999999888877653 456677774 56
Q ss_pred EEEEecCCCeEEEEEcCcceee
Q 024676 242 IFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 242 ~~~~gs~d~~v~vwd~~~g~~i 263 (264)
+++++.|+.|++||+.+++.+
T Consensus 280 -~~~~~~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 280 -IIVGSSDNLVRIFSQEKSRWA 300 (313)
T ss_dssp -EEEEETTSCEEEEESCGGGCC
T ss_pred -EEEEeCCCcEEEEeCCCCcee
Confidence 677999999999999987654
No 72
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=7.3e-35 Score=243.89 Aligned_cols=249 Identities=10% Similarity=0.215 Sum_probs=196.4
Q ss_pred EeeccCCCeeeeEeccCCCCC-eEEEEEeCCCCcEEEeCCCCceEEeeeC-----CcCCEEEEEECCC----CcEEEEec
Q 024676 11 VCHGHSRPVVDLFYSPITPDG-FFLVSASKDSSPMLRNGETGDWIGTFEG-----HKGAVWSCCLDAN----ALFSASGS 80 (264)
Q Consensus 11 ~~~~h~~~v~~~~~~~~~~~g-~~l~t~s~d~~v~i~~~~~~~~~~~~~~-----H~~~V~~v~~~~~----~~~l~s~s 80 (264)
+..+|..+|.+|+|+|.++++ ..+++++.++.|++|+..+++.+..+.. |...|.+++|+++ +.++++|+
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 345899999999999864443 4556666677999999998877666654 5678999999998 67999999
Q ss_pred CCCeEEEEeCCCCcEEEEee-cCCeEEEEEECC-CCCEEEEeeCCCcEEEeeCCCCCCCCeEe---ccCCCCeEEEEEec
Q 024676 81 ADFTAKLWDALTGDEKHSFE-HKHIVRACAFSE-DTHLLLTGGFEKILRIFDLNRPDAPPREV---GNSSGSIRTVAWLH 155 (264)
Q Consensus 81 ~D~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~-~~~~l~s~~~d~~i~~~d~~~~~~~~~~~---~~~~~~i~~~~~~~ 155 (264)
.|+.|++||+.+++.+..+. |..+|.+++|+| ++++|++++.|+.|++||+++++.. ... ..+...+.+++|+|
T Consensus 93 ~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~ 171 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLV-AIFGGVEGHRDEVLSADYDL 171 (366)
T ss_dssp TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEE-EEECSTTSCSSCEEEEEECT
T ss_pred CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEE-EEecccccccCceeEEEECC
Confidence 99999999999998888876 889999999999 8999999999999999999876543 232 45788999999998
Q ss_pred CCCeEEEEeeCCCeEEEEECCCCceeEEec-----------------------------CCCCEEEEEEcCCCcEEEEeC
Q 024676 156 SDQTILSSCTDSGGVRLWDARSGKIVQTLE-----------------------------TKSPVTSAEVSRDGRYITTAD 206 (264)
Q Consensus 156 ~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~-----------------------------~~~~v~~~~~s~~~~~l~~~~ 206 (264)
++. ++++++.|+.|++||+++++....+. +...+.++.++ +..+++++.
T Consensus 172 ~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~ 249 (366)
T 3k26_A 172 LGE-KIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSC 249 (366)
T ss_dssp TSS-EEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEECS
T ss_pred CCC-EEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEEec
Confidence 655 56677788999999999876543322 55679999998 333445566
Q ss_pred CCcEEEEECCCcee--------------eeEEecCC-CCceeeEcCC-CCCEEEEecCCCeEEEEEcCccee
Q 024676 207 GSSVKFWDANHFGL--------------VKGYNMPC-NTESASLEPK-LGNIFIAGGEDMWVHVFDFHTGEQ 262 (264)
Q Consensus 207 ~~~i~iwd~~~~~~--------------~~~~~~~~-~~~~~~~~~~-~~~~~~~gs~d~~v~vwd~~~g~~ 262 (264)
++.|++||+++... +..+..+. ....+.+.++ .+.+|++|+.|+.|++||+.+++.
T Consensus 250 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~ 321 (366)
T 3k26_A 250 ENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDP 321 (366)
T ss_dssp SSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSG
T ss_pred CCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCC
Confidence 89999999987643 55555433 3444555553 188999999999999999988753
No 73
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-33 Score=235.71 Aligned_cols=247 Identities=13% Similarity=0.177 Sum_probs=208.3
Q ss_pred ceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCC-----C
Q 024676 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSAD-----F 83 (264)
Q Consensus 9 ~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D-----~ 83 (264)
...+.+|..+|.+++|+| ++++|++++.|+.|++|++.+++.+..+. |...|.+++|+|++.++++++.+ +
T Consensus 67 ~~~~~~h~~~v~~~~~~~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g 142 (369)
T 3zwl_B 67 LGTLDGHTGTIWSIDVDC---FTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPG 142 (369)
T ss_dssp EEEECCCSSCEEEEEECT---TSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCC
T ss_pred hhhhhhcCCcEEEEEEcC---CCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCC
Confidence 345578999999999996 88999999999999999999999888888 88999999999999999999999 9
Q ss_pred eEEEEeCCCCcE------------EEEeecCC--eEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeE
Q 024676 84 TAKLWDALTGDE------------KHSFEHKH--IVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIR 149 (264)
Q Consensus 84 ~v~iwd~~~~~~------------~~~~~~~~--~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~ 149 (264)
.|++||+..... .....+.. .+..++|+|+++++++++.|+.|++||+++..........+...+.
T Consensus 143 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~ 222 (369)
T 3zwl_B 143 SINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSIS 222 (369)
T ss_dssp EEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEE
T ss_pred EEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCcee
Confidence 999999866531 11122333 8999999999999999999999999999874334455556788999
Q ss_pred EEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEecCCCCEEEEEEcCCCcEEEEe-CCC--------------cEEEEE
Q 024676 150 TVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTA-DGS--------------SVKFWD 214 (264)
Q Consensus 150 ~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~~--------------~i~iwd 214 (264)
+++|+|++. ++++++.|+.|++||+++++.+..+....++..+.++|++++++++ .++ .+++||
T Consensus 223 ~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d 301 (369)
T 3zwl_B 223 DMQFSPDLT-YFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYH 301 (369)
T ss_dssp EEEECTTSS-EEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEE
T ss_pred EEEECCCCC-EEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEe
Confidence 999998655 5666778899999999999999888888899999999999987654 344 799999
Q ss_pred CCCceeeeEEecCCC-CceeeEcCCCCCEEEEecCCCeEEEEEcCcce
Q 024676 215 ANHFGLVKGYNMPCN-TESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 215 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~ 261 (264)
..+.+.+..+..+.. ...+.+.| ++++|++|+.|+.|++|++.++.
T Consensus 302 ~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 302 KIFEEEIGRVQGHFGPLNTVAISP-QGTSYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEEECHHH
T ss_pred cCCCcchhheecccCcEEEEEECC-CCCEEEEEcCCCeEEEEECcccc
Confidence 999998888876544 45567777 58999999999999999998764
No 74
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.6e-33 Score=247.93 Aligned_cols=242 Identities=28% Similarity=0.472 Sum_probs=199.7
Q ss_pred eEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEe
Q 024676 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (264)
Q Consensus 10 ~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd 89 (264)
..+.+|..+|.+++|+| ++++|++++.|+.+++|+... ..+..+.+|...|.+++|+|++.++++|+.|+++++||
T Consensus 297 ~~~~~h~~~v~~~~~~~---~~~~l~t~~~d~~i~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~ 372 (577)
T 2ymu_A 297 QTLTGHSSSVWGVAFSP---DGQTIASASDDKTVKLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 372 (577)
T ss_dssp EEECCCSSCEEEEEECT---TSSEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEEecCCCCeEEEEECC---CCCEEEEEeCCCeEEEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEc
Confidence 34578999999999996 899999999999999999764 45677889999999999999999999999999999999
Q ss_pred CCCCcEEEEe-ecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCC
Q 024676 90 ALTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSG 168 (264)
Q Consensus 90 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~ 168 (264)
.. ++.+..+ .|...|.+++|+|++++|++++.|+.|++||.. ++ .......|...+.+++|+|++. ++++++.|+
T Consensus 373 ~~-~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~-~~-~~~~~~~~~~~v~~~~~s~d~~-~l~~~~~d~ 448 (577)
T 2ymu_A 373 RN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQ-LLQTLTGHSSSVWGVAFSPDDQ-TIASASDDK 448 (577)
T ss_dssp TT-CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-CC-EEEEEECCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred CC-CCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCC-CC-EEEEecCCCCCeEEEEECCCCC-EEEEEcCCC
Confidence 64 4444444 488899999999999999999999999999964 32 2344556788999999988665 566778889
Q ss_pred eEEEEECCCCceeEEec-CCCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEecCCC-CceeeEcCCCCCEEEE
Q 024676 169 GVRLWDARSGKIVQTLE-TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCN-TESASLEPKLGNIFIA 245 (264)
Q Consensus 169 ~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 245 (264)
+|++||.. ++.+..+. +..++.+++|+|++++|++ +.|+.|++||. ++++++.+..+.. ...+++.| ++++|++
T Consensus 449 ~v~~w~~~-~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~-dg~~l~s 525 (577)
T 2ymu_A 449 TVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSP-DGQTIAS 525 (577)
T ss_dssp EEEEEETT-SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECT-TSSCEEE
T ss_pred EEEEEECC-CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcC-CCCEEEE
Confidence 99999964 55555554 5678999999999998876 56899999995 5677777876543 45667777 5899999
Q ss_pred ecCCCeEEEEEcCcceee
Q 024676 246 GGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 246 gs~d~~v~vwd~~~g~~i 263 (264)
++.|+.|++||. +|+.+
T Consensus 526 ~~~dg~v~lwd~-~~~~~ 542 (577)
T 2ymu_A 526 ASDDKTVKLWNR-NGQLL 542 (577)
T ss_dssp EETTSEEEEECT-TSCEE
T ss_pred EECcCEEEEEeC-CCCEE
Confidence 999999999996 56543
No 75
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3e-34 Score=244.64 Aligned_cols=246 Identities=20% Similarity=0.294 Sum_probs=200.0
Q ss_pred eEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCC-------ceEEeeeCCcCCEEEEEECCCC-cEEEEecC
Q 024676 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG-------DWIGTFEGHKGAVWSCCLDANA-LFSASGSA 81 (264)
Q Consensus 10 ~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~-------~~~~~~~~H~~~V~~v~~~~~~-~~l~s~s~ 81 (264)
..+.+|..+|.+++|+|. ++++|++|+.|+.|++|++.++ +.+..+.+|.+.|.+++|+|++ .++++++.
T Consensus 75 ~~~~~h~~~V~~~~~~p~--~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~ 152 (402)
T 2aq5_A 75 PLVCGHTAPVLDIAWCPH--NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC 152 (402)
T ss_dssp CCBCCCSSCEEEEEECTT--CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET
T ss_pred ceEecCCCCEEEEEeCCC--CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC
Confidence 345799999999999962 6789999999999999999887 5577899999999999999998 69999999
Q ss_pred CCeEEEEeCCCCcEEEEe---ecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCC-eEEEEEecCC
Q 024676 82 DFTAKLWDALTGDEKHSF---EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGS-IRTVAWLHSD 157 (264)
Q Consensus 82 D~~v~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~-i~~~~~~~~~ 157 (264)
|++|++||+.+++....+ .|...|.+++|+|++++|++++.|+.|++||+++++........+.+. +..++|+++
T Consensus 153 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~- 231 (402)
T 2aq5_A 153 DNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSE- 231 (402)
T ss_dssp TSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECST-
T ss_pred CCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCC-
Confidence 999999999999888877 378899999999999999999999999999998766443332344444 788899875
Q ss_pred CeEEEEe---eCCCeEEEEECCCCce---eEEecCCCCEEEEEEcCCCcEEE-Ee-CCCcEEEEECCCce----eeeEEe
Q 024676 158 QTILSSC---TDSGGVRLWDARSGKI---VQTLETKSPVTSAEVSRDGRYIT-TA-DGSSVKFWDANHFG----LVKGYN 225 (264)
Q Consensus 158 ~~~~~~~---~~d~~v~iwd~~~~~~---~~~~~~~~~v~~~~~s~~~~~l~-~~-~~~~i~iwd~~~~~----~~~~~~ 225 (264)
+.+++++ +.|+.|++||+++++. ...+.+...+.+++|+|++.+++ ++ .|+.|++||+++.+ .+..+.
T Consensus 232 ~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~ 311 (402)
T 2aq5_A 232 GKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS 311 (402)
T ss_dssp TEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC
T ss_pred CcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc
Confidence 4567676 6789999999998764 33345667799999999998774 45 48999999999876 334444
Q ss_pred cCCCCceeeEcCCCCCEEEEecCCCeEEEEEcCcce
Q 024676 226 MPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~ 261 (264)
.......+.+.|+ +.+++ +.|+.+++|++.+++
T Consensus 312 ~~~~v~~~~~sp~-~~~~~--s~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 312 SKESQRGMGYMPK-RGLEV--NKCEIARFYKLHERK 344 (402)
T ss_dssp CSSCCSEEEECCG-GGSCG--GGTEEEEEEEEETTE
T ss_pred cCCcccceEEecc-cccce--ecceeEEEEEcCCCc
Confidence 3456677888875 66554 457799999998765
No 76
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.6e-35 Score=249.90 Aligned_cols=204 Identities=13% Similarity=0.105 Sum_probs=160.4
Q ss_pred cceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCc---eEEeeeCCcCCEEEEEECCCCcEEEEecCCCe
Q 024676 8 VPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD---WIGTFEGHKGAVWSCCLDANALFSASGSADFT 84 (264)
Q Consensus 8 ~~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~---~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~ 84 (264)
....+.+|..+|.+++|+| ++++|++++.|+.+++|+..+++ ....+.+|...|.+++|+|++.++++++.|++
T Consensus 47 ~~~~~~~h~~~v~~~~~s~---~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 123 (377)
T 3dwl_C 47 HARTFSDHDKIVTCVDWAP---KSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARV 123 (377)
T ss_dssp ECCCBCCCSSCEEEEEECT---TTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSC
T ss_pred EEEEEecCCceEEEEEEeC---CCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCe
Confidence 3344578999999999996 88999999999999999999877 56678889999999999999999999999999
Q ss_pred EEEEeCCCCcE---EEEee--cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCC-----------------CeEec
Q 024676 85 AKLWDALTGDE---KHSFE--HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAP-----------------PREVG 142 (264)
Q Consensus 85 v~iwd~~~~~~---~~~~~--~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~-----------------~~~~~ 142 (264)
|++||+.++.. ...+. |...|.+++|+|++++|++++.|+.+++||++..+.. ....
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 202 (377)
T 3dwl_C 124 ISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY- 202 (377)
T ss_dssp EEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-
T ss_pred EEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-
Confidence 99999988762 44443 7889999999999999999999999999998532211 1112
Q ss_pred cCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCce----eEEec-CCCCEEEEEEcCCCcEEEEeCCCcEEEEECC
Q 024676 143 NSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI----VQTLE-TKSPVTSAEVSRDGRYITTADGSSVKFWDAN 216 (264)
Q Consensus 143 ~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~----~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~ 216 (264)
.|.+.+.+++|+|++. ++++++.|+.|++||++++++ +..+. +..++.+++|+|++++++++.++.+.+|+..
T Consensus 203 ~~~~~v~~~~~sp~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 203 PSGGWVHAVGFSPSGN-ALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp CCSSSEEEEEECTTSS-CEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCC
T ss_pred cCCceEEEEEECCCCC-EEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence 5778899999998765 566677889999999999886 55554 4467999999999999988877777788775
No 77
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.9e-33 Score=241.67 Aligned_cols=244 Identities=22% Similarity=0.356 Sum_probs=199.4
Q ss_pred ceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEEC--CCCcEEEEecCCCeEE
Q 024676 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLD--ANALFSASGSADFTAK 86 (264)
Q Consensus 9 ~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~--~~~~~l~s~s~D~~v~ 86 (264)
...+.+|..+|.+++|+| ++ +|++|+.|++|++||..+++.+..+.+|.+.|.+++|. +++.++++|+.|++|+
T Consensus 155 ~~~~~~h~~~V~~l~~~~---~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~ 230 (464)
T 3v7d_B 155 LLQLSGHDGGVWALKYAH---GG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLH 230 (464)
T ss_dssp EEEECCCSSCEEEEEECS---TT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEE
T ss_pred EEEEeCCCcCEEEEEEcC---CC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEE
Confidence 344579999999999986 55 89999999999999999999999999999999999998 5789999999999999
Q ss_pred EEeCCCCcEE-----------------------EE-eecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEec
Q 024676 87 LWDALTGDEK-----------------------HS-FEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG 142 (264)
Q Consensus 87 iwd~~~~~~~-----------------------~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~ 142 (264)
+||+.++... .. ..|...+..+ +++++++++++.|+.|++||+++++.. ....
T Consensus 231 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~-~~~~ 307 (464)
T 3v7d_B 231 VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCL-YILS 307 (464)
T ss_dssp EEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEE-EEEC
T ss_pred EeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEE-EEec
Confidence 9999876532 11 2355666665 677899999999999999999876543 3445
Q ss_pred cCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEecC-CCCEEEEEEcCCCcEEEEeCCCcEEEEECCCceee
Q 024676 143 NSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLV 221 (264)
Q Consensus 143 ~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~ 221 (264)
.|...+.+++|.+++. .+++++.|+.|++||+++++++..+.. ..++.++.+++ ..+++++.|+.|++||+++....
T Consensus 308 ~~~~~v~~~~~~~~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~l~s~s~dg~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 308 GHTDRIYSTIYDHERK-RCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD-KFLVSAAADGSIRGWDANDYSRK 385 (464)
T ss_dssp CCSSCEEEEEEETTTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS-SEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcC-CEEEEEeCCCcEEEEECCCCcee
Confidence 6788999999998665 566778889999999999999988864 56799999984 34455677899999999998776
Q ss_pred eEEecCCCCceeeEcCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 222 KGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
..+..........+.+ .+.++++|+ |+.|++||+.+|+.+
T Consensus 386 ~~~~~~~~~~~~~~~~-~~~~l~~~~-dg~i~iwd~~~g~~~ 425 (464)
T 3v7d_B 386 FSYHHTNLSAITTFYV-SDNILVSGS-ENQFNIYNLRSGKLV 425 (464)
T ss_dssp EEEECTTCCCEEEEEE-CSSEEEEEE-TTEEEEEETTTCCEE
T ss_pred eeecCCCCccEEEEEe-CCCEEEEec-CCeEEEEECCCCcEE
Confidence 6665544455556666 488899888 899999999999875
No 78
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.2e-34 Score=248.25 Aligned_cols=248 Identities=12% Similarity=0.100 Sum_probs=183.9
Q ss_pred EeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeC--CcCCEEEEEECCCCcEEEEecCCCeEEEE
Q 024676 11 VCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEG--HKGAVWSCCLDANALFSASGSADFTAKLW 88 (264)
Q Consensus 11 ~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~--H~~~V~~v~~~~~~~~l~s~s~D~~v~iw 88 (264)
.+.||.++|.+|+|+| .++++|++||.|++|++||++++........ +...+.+++|++++.++++|+.|++|++|
T Consensus 159 ~~~gH~~~V~~l~f~p--~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~w 236 (435)
T 4e54_B 159 KGIGAGGSITGLKFNP--LNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILL 236 (435)
T ss_dssp CCCSSSCCCCEEEECS--SCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEE
T ss_pred EccCCCCCEEEEEEeC--CCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeee
Confidence 3468999999999997 3678999999999999999987654333333 44567889999999999999999999999
Q ss_pred eCCCCcEEEEeecCCeEEEEEECCCCC-EEEEeeCCCcEEEeeCCCCCCCCe--EeccCCCCeEEEEEecCCCeEEEEee
Q 024676 89 DALTGDEKHSFEHKHIVRACAFSEDTH-LLLTGGFEKILRIFDLNRPDAPPR--EVGNSSGSIRTVAWLHSDQTILSSCT 165 (264)
Q Consensus 89 d~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~~~d~~~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~ 165 (264)
|+..........|...|.+++|+|+++ ++++++.|+.|++||++..+.... ....|...|.+++|+|++. ++++++
T Consensus 237 d~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~s~~ 315 (435)
T 4e54_B 237 NMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGA-RLLTTD 315 (435)
T ss_dssp ESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSS-EEEEEE
T ss_pred ccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCC-eeEEEc
Confidence 987654333335888999999999875 788899999999999987654322 2245778999999988655 566778
Q ss_pred CCCeEEEEECCCCceeEEecCCC-------CEEEEEEcCCCcEEEEe-------------CCCcEEEEECCCceeeeEEe
Q 024676 166 DSGGVRLWDARSGKIVQTLETKS-------PVTSAEVSRDGRYITTA-------------DGSSVKFWDANHFGLVKGYN 225 (264)
Q Consensus 166 ~d~~v~iwd~~~~~~~~~~~~~~-------~v~~~~~s~~~~~l~~~-------------~~~~i~iwd~~~~~~~~~~~ 225 (264)
.|+.|+|||++++++...+..+. .+....++|++.+++++ +++.|++||..+++.+..+.
T Consensus 316 ~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~ 395 (435)
T 4e54_B 316 QKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLY 395 (435)
T ss_dssp SSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEEC
T ss_pred CCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEe
Confidence 88999999999988766553211 12344566666544432 23579999999998887764
Q ss_pred cC-C-CCcee-eEcCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 226 MP-C-NTESA-SLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 226 ~~-~-~~~~~-~~~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
.+ . ...+. .|+| ++.+|++|+ |+.|+|||+.+|+..
T Consensus 396 ~~~~~~v~s~~~fsp-dg~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 396 DPESSGISSLNEFNP-MGDTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp CSSCCCCCCEEEECT-TSSCEEEEC-SSEEEECCCC-----
T ss_pred CCCCCcEEEEEEECC-CCCEEEEEc-CCcEEEEECCcCeee
Confidence 32 2 23344 4666 588888876 889999999998753
No 79
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-34 Score=251.08 Aligned_cols=246 Identities=11% Similarity=0.020 Sum_probs=187.0
Q ss_pred EeeccCCCeeeeEeccC---CCCCeEEEEEeCCCCcEEEeCCCCce-----------EEeeeCCcCCEEEEEECCCCcEE
Q 024676 11 VCHGHSRPVVDLFYSPI---TPDGFFLVSASKDSSPMLRNGETGDW-----------IGTFEGHKGAVWSCCLDANALFS 76 (264)
Q Consensus 11 ~~~~h~~~v~~~~~~~~---~~~g~~l~t~s~d~~v~i~~~~~~~~-----------~~~~~~H~~~V~~v~~~~~~~~l 76 (264)
.+.+|.+.|..|+|+|. .+++.+||+++.|++|++|++.+++. ..++.+|.+.|.+++|++++ .|
T Consensus 202 ~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~l 280 (524)
T 2j04_B 202 TIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TV 280 (524)
T ss_dssp EEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EE
T ss_pred EEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eE
Confidence 34678899999999985 24578999999999999999987632 24678999999999999865 78
Q ss_pred EEecCCCeEEEEeCCCCc-EEEEe-ecCCeEEEE--EECCCC-CEEEEeeCCCcEEEeeCCCCCCCCeEeccCC-CCeEE
Q 024676 77 ASGSADFTAKLWDALTGD-EKHSF-EHKHIVRAC--AFSEDT-HLLLTGGFEKILRIFDLNRPDAPPREVGNSS-GSIRT 150 (264)
Q Consensus 77 ~s~s~D~~v~iwd~~~~~-~~~~~-~~~~~v~~~--~~~~~~-~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~-~~i~~ 150 (264)
++|+.||+|++||+.++. +...+ .|..+|+++ .++|++ ++|+||+.|+++++||+++++......++.. ..+.+
T Consensus 281 asgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~ 360 (524)
T 2j04_B 281 VCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVP 360 (524)
T ss_dssp EEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCC
T ss_pred EEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccc
Confidence 999999999999998763 33333 488999999 568887 8999999999999999986554333333222 34778
Q ss_pred EEEecCCCeEEEEeeCCCeEEEEECCCCceeEEec-CCCCEEEEEEcCCCcEEE-EeCCCcEEEEECCCc-----e----
Q 024676 151 VAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLE-TKSPVTSAEVSRDGRYIT-TADGSSVKFWDANHF-----G---- 219 (264)
Q Consensus 151 ~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~-~~~~~~i~iwd~~~~-----~---- 219 (264)
++|+|++.. +++++.|++|++||+++++++..+. +..+|.+++|+|++++|+ ++.|++|++||+... +
T Consensus 361 v~fsp~~~~-l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~ 439 (524)
T 2j04_B 361 VVYCPQIYS-YIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSA 439 (524)
T ss_dssp EEEETTTTE-EEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC-----
T ss_pred eEeCCCcCe-EEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCcc
Confidence 999987665 5566777999999999998876654 556899999999998765 467899999986421 0
Q ss_pred -----eeeEEec------------------------------C-CCCceeeEcCCC--CCEEEEecCCCeEEEEEcC
Q 024676 220 -----LVKGYNM------------------------------P-CNTESASLEPKL--GNIFIAGGEDMWVHVFDFH 258 (264)
Q Consensus 220 -----~~~~~~~------------------------------~-~~~~~~~~~~~~--~~~~~~gs~d~~v~vwd~~ 258 (264)
.+....+ + ....+.+|+|+. +..+++|+.||.||||++.
T Consensus 440 ~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~ 516 (524)
T 2j04_B 440 TQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLS 516 (524)
T ss_dssp -CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECS
T ss_pred ceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEcc
Confidence 0100000 0 112345677753 4599999999999999985
No 80
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.6e-33 Score=249.98 Aligned_cols=242 Identities=18% Similarity=0.206 Sum_probs=206.6
Q ss_pred eccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCC----ceEEeeeCCcCC-EEEEEECC--CCcEEEEecCCCeE
Q 024676 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG----DWIGTFEGHKGA-VWSCCLDA--NALFSASGSADFTA 85 (264)
Q Consensus 13 ~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~----~~~~~~~~H~~~-V~~v~~~~--~~~~l~s~s~D~~v 85 (264)
..|.+.|.+++|+| +|++|++++ ++.+++|+..++ +....+.+|.+. |.+++|+| ++.++++|+.|++|
T Consensus 15 ~~~~~~v~~~~~sp---dg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v 90 (615)
T 1pgu_A 15 STQRNFTTHLSYDP---TTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKV 90 (615)
T ss_dssp CCCTTCCCCCEEET---TTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEE
T ss_pred CCccCceeEEEECC---CCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEE
Confidence 57999999999996 899999998 889999999998 888999999999 99999999 99999999999999
Q ss_pred EEEeCCCC--------cEEEEee-cCCeEEEEEECCCCCEEEEeeCC----CcEEEeeCCCCCCCCeEeccCCCCeEEEE
Q 024676 86 KLWDALTG--------DEKHSFE-HKHIVRACAFSEDTHLLLTGGFE----KILRIFDLNRPDAPPREVGNSSGSIRTVA 152 (264)
Q Consensus 86 ~iwd~~~~--------~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d----~~i~~~d~~~~~~~~~~~~~~~~~i~~~~ 152 (264)
++||+.++ .....+. |..+|..++|+|++++|++++.+ +.+++||.. + .......|...+.+++
T Consensus 91 ~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~--~-~~~~~~~~~~~v~~~~ 167 (615)
T 1pgu_A 91 IVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG--N-SLGEVSGHSQRINACH 167 (615)
T ss_dssp EEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC--C-EEEECCSCSSCEEEEE
T ss_pred EEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECC--C-cceeeecCCccEEEEE
Confidence 99999754 4444444 78899999999999999999987 688899842 2 2344556788999999
Q ss_pred EecCCCeEEEEeeCCCeEEEEECCCCceeEEecC-CC---CEEEEEEcCC-CcEEEE-eCCCcEEEEECCCceeeeEE-e
Q 024676 153 WLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET-KS---PVTSAEVSRD-GRYITT-ADGSSVKFWDANHFGLVKGY-N 225 (264)
Q Consensus 153 ~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~-~~---~v~~~~~s~~-~~~l~~-~~~~~i~iwd~~~~~~~~~~-~ 225 (264)
|+|++..++++++.|+.|++||+++++.+..+.. .. ++.+++|+|+ ++++++ +.++.|++||+++++.+..+ .
T Consensus 168 ~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 247 (615)
T 1pgu_A 168 LKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIED 247 (615)
T ss_dssp ECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCB
T ss_pred ECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecc
Confidence 9998877788889999999999999999888864 45 7999999999 887765 56899999999999988888 3
Q ss_pred ---c-CCCCceeeEcCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 226 ---M-PCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 226 ---~-~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
. ......+.+. .+.+|++++.|+.|++||+.+++.+
T Consensus 248 ~~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~ 287 (615)
T 1pgu_A 248 DQEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKCV 287 (615)
T ss_dssp TTBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEE
T ss_pred cccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcEE
Confidence 3 3344556666 5899999999999999999988754
No 81
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-33 Score=261.83 Aligned_cols=240 Identities=12% Similarity=0.111 Sum_probs=196.9
Q ss_pred eeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCC
Q 024676 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL 91 (264)
Q Consensus 12 ~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~ 91 (264)
..||...|.+|+|+| +|++||+|+.|++|++|+..+++.+..+ .|.++|.+++|+| +.+|++++.|++|++||+.
T Consensus 13 ~~gh~~~V~~lafsp---dg~~lAsgs~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~ 87 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDF---TQNLLAIATVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLY 87 (902)
T ss_dssp EEECSSCEEEEEEET---TTTEEEEEETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEETT
T ss_pred ccCCCCCcEEEEECC---CCCEEEEEeCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECC
Confidence 369999999999996 8999999999999999999887765554 4889999999999 7899999999999999999
Q ss_pred CCcEEEEeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCC----------eEeccCCCCeEEEEEecCCCeEE
Q 024676 92 TGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPP----------REVGNSSGSIRTVAWLHSDQTIL 161 (264)
Q Consensus 92 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~----------~~~~~~~~~i~~~~~~~~~~~~~ 161 (264)
+++.+..+.|...|++++|+|+++++++|+.|+.|++||++++.... .....|.+.+.+++|+|.+..++
T Consensus 88 ~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l 167 (902)
T 2oaj_A 88 SQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV 167 (902)
T ss_dssp TCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred CCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEE
Confidence 99998888888899999999999999999999999999998654310 11234678899999999776778
Q ss_pred EEeeCCCeEEEEECCCCceeEEecCC-------------------CCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceee
Q 024676 162 SSCTDSGGVRLWDARSGKIVQTLETK-------------------SPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLV 221 (264)
Q Consensus 162 ~~~~~d~~v~iwd~~~~~~~~~~~~~-------------------~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~ 221 (264)
++++.|+.| +||+++++++..+..+ ..|.+++|+|+|.+|++ +.|+.|++||+++++++
T Consensus 168 ~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 168 LISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp EEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred EEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE
Confidence 888899999 9999999988877644 56999999999988765 56899999999998876
Q ss_pred eEEec-----C-------------C-CCceeeEc----CCCCCEEEEecCCC-----eEEEEEc
Q 024676 222 KGYNM-----P-------------C-NTESASLE----PKLGNIFIAGGEDM-----WVHVFDF 257 (264)
Q Consensus 222 ~~~~~-----~-------------~-~~~~~~~~----~~~~~~~~~gs~d~-----~v~vwd~ 257 (264)
....+ + . ....++|. |+.+.++++||.|. .+++|++
T Consensus 247 ~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 247 MARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp EEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEE
T ss_pred EEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEec
Confidence 54221 1 1 12345564 32236788887763 7889884
No 82
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=5.8e-33 Score=266.53 Aligned_cols=248 Identities=25% Similarity=0.462 Sum_probs=214.0
Q ss_pred eEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEe
Q 024676 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (264)
Q Consensus 10 ~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd 89 (264)
..+.+|.+.|.+++|+| +|++|++|+.|+.|++|+..+++.+..+.+|.+.|.+++|+|++.++++++.|++|++||
T Consensus 609 ~~~~~h~~~v~~~~~s~---~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd 685 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQ---DGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWD 685 (1249)
T ss_dssp EEECCCSSCEEEEEECT---TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEEecccccEEEEEECC---CCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence 45679999999999996 899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEee-cCCeEEEEEECC--CCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeC
Q 024676 90 ALTGDEKHSFE-HKHIVRACAFSE--DTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTD 166 (264)
Q Consensus 90 ~~~~~~~~~~~-~~~~v~~~~~~~--~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 166 (264)
+.++..+..+. |...|.+++|+| +..++++++.|+.|++||+++++.. .....|.+.+.+++|+|++. ++++++.
T Consensus 686 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~-~~~~~h~~~v~~~~~sp~~~-~l~s~s~ 763 (1249)
T 3sfz_A 686 SATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECR-NTMFGHTNSVNHCRFSPDDE-LLASCSA 763 (1249)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEE-EEECCCSSCEEEEEECSSTT-EEEEEES
T ss_pred CCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchh-heecCCCCCEEEEEEecCCC-EEEEEEC
Confidence 99998888774 888999999999 5668999999999999999877543 34456888999999998665 5667788
Q ss_pred CCeEEEEECCCCceeEEecCC--------------CCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeeeEEec--CCCC
Q 024676 167 SGGVRLWDARSGKIVQTLETK--------------SPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNM--PCNT 230 (264)
Q Consensus 167 d~~v~iwd~~~~~~~~~~~~~--------------~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~--~~~~ 230 (264)
|+.|++||+++++....+... ..+.+++|+|+|.+++++.++.+.+||+.+...+..+.. ....
T Consensus 764 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v 843 (1249)
T 3sfz_A 764 DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTI 843 (1249)
T ss_dssp SSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCC
T ss_pred CCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCce
Confidence 899999999998876655321 257788999999998887789999999999888777753 3345
Q ss_pred ceeeEcCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 231 ESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 231 ~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
....+.| .+.++++++.|+.|++||+.+++.+
T Consensus 844 ~~~~~sp-~~~~l~~~~~dg~v~vwd~~~~~~~ 875 (1249)
T 3sfz_A 844 QYCDFSP-YDHLAVIALSQYCVELWNIDSRLKV 875 (1249)
T ss_dssp CEEEECS-STTEEEEECSSSCEEEEETTTTEEE
T ss_pred EEEEEcC-CCCEEEEEeCCCeEEEEEcCCCcee
Confidence 5667777 5899999999999999999987754
No 83
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.4e-32 Score=234.52 Aligned_cols=240 Identities=17% Similarity=0.220 Sum_probs=200.7
Q ss_pred ccCCCee--eeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeC-CcCCEEEEEECCCCcEEEEecCCCeEEEEeC
Q 024676 14 GHSRPVV--DLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEG-HKGAVWSCCLDANALFSASGSADFTAKLWDA 90 (264)
Q Consensus 14 ~h~~~v~--~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~-H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~ 90 (264)
+|...+. ++.|++ ..+++++.|+.|++|+..+++....+.. |.+.|.+++|+|++.++++|+.|+.|++||+
T Consensus 89 ~~~~~~~~~~~~~s~-----~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~ 163 (401)
T 4aez_A 89 GIIDDYYLNLLDWSN-----LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDV 163 (401)
T ss_dssp TCCCCTTCBCEEECT-----TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCcCCceEEEEeecC-----CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEEC
Confidence 6666544 466653 3578899999999999999998877765 8999999999999999999999999999999
Q ss_pred CCCcEEEEe-ecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCe
Q 024676 91 LTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGG 169 (264)
Q Consensus 91 ~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~ 169 (264)
.+++.+..+ .|...|.++.| +++++++++.|+.|++||++...........|.+.+.+++|++++ .++++++.|+.
T Consensus 164 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~ 240 (401)
T 4aez_A 164 ESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDG-LQLASGGNDNV 240 (401)
T ss_dssp TTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSC
T ss_pred cCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCC-CEEEEEeCCCe
Confidence 999887777 47889999999 457999999999999999986555455666788999999999854 56777788899
Q ss_pred EEEEECCCCceeEEec-CCCCEEEEEEcCCC-cEEEEe---CCCcEEEEECCCceeeeEEecCCCCceeeEcCCCCCEEE
Q 024676 170 VRLWDARSGKIVQTLE-TKSPVTSAEVSRDG-RYITTA---DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFI 244 (264)
Q Consensus 170 v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~-~~l~~~---~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (264)
|++||+++++.+..+. +..++.+++|+|++ .+++++ .++.|++||+++++.+..+..+.....+.+.++ +.+++
T Consensus 241 v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~ 319 (401)
T 4aez_A 241 VQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPH-SKEIM 319 (401)
T ss_dssp EEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEECSS-SSEEE
T ss_pred EEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCC-CCeEE
Confidence 9999999999887775 55679999999976 556654 389999999999999998887777778888885 77777
Q ss_pred E--ecCCCeEEEEEcCccee
Q 024676 245 A--GGEDMWVHVFDFHTGEQ 262 (264)
Q Consensus 245 ~--gs~d~~v~vwd~~~g~~ 262 (264)
+ |+.|+.|++||+.+++.
T Consensus 320 ~~~g~~dg~i~v~~~~~~~~ 339 (401)
T 4aez_A 320 STHGFPDNNLSIWSYSSSGL 339 (401)
T ss_dssp EEECTTTCEEEEEEEETTEE
T ss_pred EEeecCCCcEEEEecCCccc
Confidence 7 55899999999987654
No 84
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.4e-33 Score=237.99 Aligned_cols=241 Identities=10% Similarity=0.097 Sum_probs=181.9
Q ss_pred EeeccCCCeeeeEeccCCCCCeEEEEE-----------eCCCCcEEEeCCCCce-E---Ee-----eeCCcCCEEEEEEC
Q 024676 11 VCHGHSRPVVDLFYSPITPDGFFLVSA-----------SKDSSPMLRNGETGDW-I---GT-----FEGHKGAVWSCCLD 70 (264)
Q Consensus 11 ~~~~h~~~v~~~~~~~~~~~g~~l~t~-----------s~d~~v~i~~~~~~~~-~---~~-----~~~H~~~V~~v~~~ 70 (264)
.+.+|...|.++++++ +.+++| +.|+.+|+|+..+... + .. ...+...+++++|+
T Consensus 68 ~l~~~~~~v~s~~~~~-----~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fS 142 (365)
T 4h5i_A 68 ALEDNDDSPTAIDASK-----GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYIS 142 (365)
T ss_dssp ECCTTSCCCCEEEEET-----TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEEC
T ss_pred EccCCCCceEEEEeCC-----CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEc
Confidence 3467888888887753 455554 5678899998765431 1 11 12355679999999
Q ss_pred CCCcEEE--EecCCCeEEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCe-EeccCCCC
Q 024676 71 ANALFSA--SGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPR-EVGNSSGS 147 (264)
Q Consensus 71 ~~~~~l~--s~s~D~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~-~~~~~~~~ 147 (264)
||+++++ +++.|++|||||+.+++.+..+.|...|.+++|+|+++++++++.++ +.+|+..+++.... ....+...
T Consensus 143 pDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~ 221 (365)
T 4h5i_A 143 REGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDFDKNWS 221 (365)
T ss_dssp TTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCCCTTEE
T ss_pred CCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeeecCCCCCC
Confidence 9999865 56689999999999999999999999999999999999999988655 55566555543322 22346678
Q ss_pred eEEEEEecCCCeEEEEeeCCC----eEEEEECCCCcee----EEe-cCCCCEEEEEEcCCCcEEEE-eCCCcEEEEECCC
Q 024676 148 IRTVAWLHSDQTILSSCTDSG----GVRLWDARSGKIV----QTL-ETKSPVTSAEVSRDGRYITT-ADGSSVKFWDANH 217 (264)
Q Consensus 148 i~~~~~~~~~~~~~~~~~~d~----~v~iwd~~~~~~~----~~~-~~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~ 217 (264)
+.+++|+|++..++++ +.|+ .+++||+...... ..+ .+..+|.+++|+|+|++|++ +.|++|+|||+++
T Consensus 222 v~~v~fspdg~~l~~~-s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~ 300 (365)
T 4h5i_A 222 LSKINFIADDTVLIAA-SLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKD 300 (365)
T ss_dssp EEEEEEEETTEEEEEE-EESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred EEEEEEcCCCCEEEEE-ecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCC
Confidence 9999999877655544 4444 6889998876532 223 34567999999999999876 5689999999999
Q ss_pred ceeeeEE-ecCC-CCceeeEcCCCCCEEEEecCCCeEEEEEcCc
Q 024676 218 FGLVKGY-NMPC-NTESASLEPKLGNIFIAGGEDMWVHVFDFHT 259 (264)
Q Consensus 218 ~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~ 259 (264)
++++..+ ..+. .+.+++|+| ++++|++||.|++|||||+.+
T Consensus 301 ~~~~~~~~~gH~~~V~~v~fSp-dg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 301 LSMSKIFKQAHSFAITEVTISP-DSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp TEEEEEETTSSSSCEEEEEECT-TSCEEEEEETTSEEEEEECCT
T ss_pred CcEEEEecCcccCCEEEEEECC-CCCEEEEEeCCCeEEEEEcCC
Confidence 9998887 3444 355677887 599999999999999999853
No 85
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-33 Score=242.33 Aligned_cols=241 Identities=13% Similarity=0.110 Sum_probs=189.2
Q ss_pred eeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCC---CCceEEeeeC------------CcCCEEEEE--ECCCCc
Q 024676 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGE---TGDWIGTFEG------------HKGAVWSCC--LDANAL 74 (264)
Q Consensus 12 ~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~---~~~~~~~~~~------------H~~~V~~v~--~~~~~~ 74 (264)
..+|..+|.+|+|+| ++++|++|+.|+.|++|+++ +++.+..+.+ +...+.++. +++++.
T Consensus 107 ~~~h~~~v~~~~~~~---~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (437)
T 3gre_A 107 TYDCSSTVTQITMIP---NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS 183 (437)
T ss_dssp EEECSSCEEEEEECT---TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE
T ss_pred eccCCCCEEEEEEeC---CCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCC
Confidence 346999999999996 88999999999999999984 5655544433 344555555 557899
Q ss_pred EEEEecCCCeEEEEeCCCCcEEEEee---cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEE
Q 024676 75 FSASGSADFTAKLWDALTGDEKHSFE---HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTV 151 (264)
Q Consensus 75 ~l~s~s~D~~v~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~ 151 (264)
++++|+.|++|++||+.+++.+..+. |...|++++|+|++++|++|+.|+.|++||++.++........+...+.++
T Consensus 184 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~ 263 (437)
T 3gre_A 184 LLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHV 263 (437)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEE
T ss_pred EEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEE
Confidence 99999999999999999998888775 678999999999999999999999999999987554333223566789999
Q ss_pred EEec---CCCeEEEEeeCCCeEEEEECCCCceeEEecC---------------------------CCCEEEEEEcCCCcE
Q 024676 152 AWLH---SDQTILSSCTDSGGVRLWDARSGKIVQTLET---------------------------KSPVTSAEVSRDGRY 201 (264)
Q Consensus 152 ~~~~---~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~---------------------------~~~v~~~~~s~~~~~ 201 (264)
+|.| +++.++++++.|+.|++||+++++++..+.. ...|.+++++ ++.+
T Consensus 264 ~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~ 342 (437)
T 3gre_A 264 EVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKI 342 (437)
T ss_dssp EECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEE
T ss_pred EeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceE
Confidence 8775 3556888889999999999999998776652 2347888999 6666
Q ss_pred EEE-eCCCcEEEEECCCceeeeEEec--------------------------------------CCCCceeeEcCC-CCC
Q 024676 202 ITT-ADGSSVKFWDANHFGLVKGYNM--------------------------------------PCNTESASLEPK-LGN 241 (264)
Q Consensus 202 l~~-~~~~~i~iwd~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~-~~~ 241 (264)
|++ +.|+.|++||+++++....+.. ......+.+.+. .+.
T Consensus 343 l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~ 422 (437)
T 3gre_A 343 LLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETP 422 (437)
T ss_dssp EEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSE
T ss_pred EEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCce
Confidence 555 5689999999998876665543 122334455543 367
Q ss_pred EEEEecCCCeEEEEE
Q 024676 242 IFIAGGEDMWVHVFD 256 (264)
Q Consensus 242 ~~~~gs~d~~v~vwd 256 (264)
+|++|+.||.|++|+
T Consensus 423 ~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 423 LLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEEEETTSCEEEEC
T ss_pred EEEEEcCCceEEEeC
Confidence 999999999999995
No 86
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3.2e-33 Score=238.32 Aligned_cols=238 Identities=19% Similarity=0.302 Sum_probs=188.9
Q ss_pred CeeeeEeccCCCCC-eEEEEEeCCCCcEEEeCCCC----ceEEeeeCCcCCEEEEEECC-CCcEEEEecCCCeEEEEeCC
Q 024676 18 PVVDLFYSPITPDG-FFLVSASKDSSPMLRNGETG----DWIGTFEGHKGAVWSCCLDA-NALFSASGSADFTAKLWDAL 91 (264)
Q Consensus 18 ~v~~~~~~~~~~~g-~~l~t~s~d~~v~i~~~~~~----~~~~~~~~H~~~V~~v~~~~-~~~~l~s~s~D~~v~iwd~~ 91 (264)
....++++| +. .++++++.||.|++|+..+. ..+..+.+|.+.|.+++|+| ++.++++|+.|++|++||+.
T Consensus 36 ~~~~~~~~~---~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~ 112 (402)
T 2aq5_A 36 DSGFCAVNP---KFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIP 112 (402)
T ss_dssp SSCSEEECS---SEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECC
T ss_pred CCCcEEECC---CeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEcc
Confidence 344577775 44 34556899999999998654 23456789999999999999 89999999999999999998
Q ss_pred CC-------cEEEEe-ecCCeEEEEEECCCC-CEEEEeeCCCcEEEeeCCCCCCCCeEe--ccCCCCeEEEEEecCCCeE
Q 024676 92 TG-------DEKHSF-EHKHIVRACAFSEDT-HLLLTGGFEKILRIFDLNRPDAPPREV--GNSSGSIRTVAWLHSDQTI 160 (264)
Q Consensus 92 ~~-------~~~~~~-~~~~~v~~~~~~~~~-~~l~s~~~d~~i~~~d~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~ 160 (264)
++ .....+ .|...|.+++|+|++ ++|++++.|+.|++||+++++.. ..+ ..|...+.+++|+|++. +
T Consensus 113 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~-~ 190 (402)
T 2aq5_A 113 DGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAV-LTLGPDVHPDTIYSVDWSRDGA-L 190 (402)
T ss_dssp TTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEE-EEECTTTCCSCEEEEEECTTSS-C
T ss_pred CCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCcc-EEEecCCCCCceEEEEECCCCC-E
Confidence 87 444444 488999999999998 69999999999999999876543 333 56788999999998655 5
Q ss_pred EEEeeCCCeEEEEECCCCceeEEe-cCC-C-CEEEEEEcCCCcEEEEe----CCCcEEEEECCCcee-eeEEe--cCCCC
Q 024676 161 LSSCTDSGGVRLWDARSGKIVQTL-ETK-S-PVTSAEVSRDGRYITTA----DGSSVKFWDANHFGL-VKGYN--MPCNT 230 (264)
Q Consensus 161 ~~~~~~d~~v~iwd~~~~~~~~~~-~~~-~-~v~~~~~s~~~~~l~~~----~~~~i~iwd~~~~~~-~~~~~--~~~~~ 230 (264)
+++++.|+.|++||+++++.+..+ ..+ . .+..+.|+|++++++++ .++.|++||+++.+. +.... .....
T Consensus 191 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v 270 (402)
T 2aq5_A 191 ICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGV 270 (402)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSC
T ss_pred EEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCce
Confidence 666778899999999999988877 333 3 37899999999998876 578999999998654 33333 33445
Q ss_pred ceeeEcCCCCCEE-EEecCCCeEEEEEcCcce
Q 024676 231 ESASLEPKLGNIF-IAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 231 ~~~~~~~~~~~~~-~~gs~d~~v~vwd~~~g~ 261 (264)
....+.++ +.++ ++|+.|+.|++||+.+++
T Consensus 271 ~~~~~s~~-~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 271 LLPFFDPD-TNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp EEEEEETT-TTEEEEEETTCSCEEEEEECSST
T ss_pred eEEEEcCC-CCEEEEEEcCCCeEEEEEecCCC
Confidence 66777875 5656 567789999999998876
No 87
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=7e-34 Score=241.00 Aligned_cols=221 Identities=23% Similarity=0.383 Sum_probs=183.5
Q ss_pred CcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEEEee-cCCeEEEEEECCCCCEEEEe
Q 024676 42 SPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFE-HKHIVRACAFSEDTHLLLTG 120 (264)
Q Consensus 42 ~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~ 120 (264)
.+..|+..+....++|.+|.+.|.+++|+|++.+++||+.|++|+|||..++.....+. |...|..++|+|++++|++|
T Consensus 47 ~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~ 126 (380)
T 3iz6_a 47 TAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACG 126 (380)
T ss_dssp GCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEEC
T ss_pred cccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEe
Confidence 44567777777888999999999999999999999999999999999999998777765 77889999999999999999
Q ss_pred eCCCcEEEeeCCCCCC------CCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEec------CCC
Q 024676 121 GFEKILRIFDLNRPDA------PPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLE------TKS 188 (264)
Q Consensus 121 ~~d~~i~~~d~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~------~~~ 188 (264)
+.|+.+++||+.+... ....+..|.+.+.++.|.|+++..+++++.|++|++||+++++++..+. +..
T Consensus 127 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~ 206 (380)
T 3iz6_a 127 GLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTA 206 (380)
T ss_dssp CSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCS
T ss_pred eCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCcc
Confidence 9999999999864321 1233456788888899998877778888999999999999999887662 345
Q ss_pred CEEEEEEcC-CCcEEE-EeCCCcEEEEECCC-ceeeeEEecCC-CCceeeEcCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 189 PVTSAEVSR-DGRYIT-TADGSSVKFWDANH-FGLVKGYNMPC-NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 189 ~v~~~~~s~-~~~~l~-~~~~~~i~iwd~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
.+.++.++| ++.+++ ++.|+.|++||++. ...+..+..+. ....+.+.| ++.+|++||.|++|++||+.+|+.+
T Consensus 207 ~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~i~lwd~~~~~~~ 284 (380)
T 3iz6_a 207 DVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFP-DGQRFGTGSDDGTCRLFDMRTGHQL 284 (380)
T ss_dssp CEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECT-TSSEEEEECSSSCEEEEETTTTEEE
T ss_pred CeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEec-CCCeEEEEcCCCeEEEEECCCCcEE
Confidence 799999987 676665 56689999999984 46677776544 456777887 5899999999999999999988754
No 88
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.1e-32 Score=226.17 Aligned_cols=207 Identities=19% Similarity=0.248 Sum_probs=169.1
Q ss_pred ceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCc--eEEeeeCCcCCEEEEEECCC--CcEEEEecCCCe
Q 024676 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDAN--ALFSASGSADFT 84 (264)
Q Consensus 9 ~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~--~~~~~~~H~~~V~~v~~~~~--~~~l~s~s~D~~ 84 (264)
...+.||+++|.+|+|+|. .+|++|++|+.|++|++||.++++ .+..+.+|...|.+++|+|+ +.++++|+.|++
T Consensus 46 ~~~l~gH~~~V~~v~~s~~-~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~ 124 (297)
T 2pm7_B 46 IDTLTGHEGPVWRVDWAHP-KFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGK 124 (297)
T ss_dssp CEEECCCSSCEEEEEECCG-GGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSE
T ss_pred EEEEccccCCeEEEEecCC-CcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCc
Confidence 4566899999999999852 147899999999999999998874 45678899999999999997 789999999999
Q ss_pred EEEEeCCCCc---EEEEeecCCeEEEEEECCC-------------CCEEEEeeCCCcEEEeeCCCCCCC---CeEeccCC
Q 024676 85 AKLWDALTGD---EKHSFEHKHIVRACAFSED-------------THLLLTGGFEKILRIFDLNRPDAP---PREVGNSS 145 (264)
Q Consensus 85 v~iwd~~~~~---~~~~~~~~~~v~~~~~~~~-------------~~~l~s~~~d~~i~~~d~~~~~~~---~~~~~~~~ 145 (264)
|++||+.++. ......|...|..++|+|+ +++|++|+.|++|++||++++... ...+..|.
T Consensus 125 v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~ 204 (297)
T 2pm7_B 125 VSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS 204 (297)
T ss_dssp EEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS
T ss_pred EEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCC
Confidence 9999998753 2233358889999999997 579999999999999999765421 23445688
Q ss_pred CCeEEEEEecCC--CeEEEEeeCCCeEEEEECCCCc--e-eEEe---cCCCCEEEEEEcCCCcEEEE-eCCCcEEEEECC
Q 024676 146 GSIRTVAWLHSD--QTILSSCTDSGGVRLWDARSGK--I-VQTL---ETKSPVTSAEVSRDGRYITT-ADGSSVKFWDAN 216 (264)
Q Consensus 146 ~~i~~~~~~~~~--~~~~~~~~~d~~v~iwd~~~~~--~-~~~~---~~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~ 216 (264)
..+.+++|+|++ +.++++++.|++|+|||+++++ . ...+ .+...+.+++|+|++++|++ +.|+.|++|+..
T Consensus 205 ~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 205 DWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 899999999875 5788899999999999998753 1 1222 23467999999999987765 568999999976
No 89
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=4.2e-32 Score=233.82 Aligned_cols=233 Identities=18% Similarity=0.315 Sum_probs=193.9
Q ss_pred eccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCC
Q 024676 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALT 92 (264)
Q Consensus 13 ~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~ 92 (264)
.+|..+|.++.| ++++|++|+.|+.|++||..+++.+..+.+|.+.|.+++| ++.++++|+.|++|++||+.+
T Consensus 130 ~~~~~~v~~~~~-----d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~ 202 (435)
T 1p22_A 130 SETSKGVYCLQY-----DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNT 202 (435)
T ss_dssp CSSCCCEEEEEC-----CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSS
T ss_pred cCCCCcEEEEEE-----CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCC
Confidence 367788998876 5789999999999999999999999999999999999998 688999999999999999999
Q ss_pred CcEEEEee-cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCC--eEeccCCCCeEEEEEecCCCeEEEEeeCCCe
Q 024676 93 GDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPP--REVGNSSGSIRTVAWLHSDQTILSSCTDSGG 169 (264)
Q Consensus 93 ~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~ 169 (264)
++.+..+. |...|.++.+++ ..+++|+.|+.|++||+++++... .....+...+.++++ ++.++++++.|+.
T Consensus 203 ~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~s~~~dg~ 277 (435)
T 1p22_A 203 GEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRT 277 (435)
T ss_dssp CCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE---ETTEEEEEETTSE
T ss_pred CcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe---CCCEEEEEeCCCe
Confidence 98877775 778899999874 589999999999999998765442 344567889999988 2346777888899
Q ss_pred EEEEECCCCceeEEecC-CCCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeeeEEecCCCCc-eeeEcCCCCCEEEEec
Q 024676 170 VRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPCNTE-SASLEPKLGNIFIAGG 247 (264)
Q Consensus 170 v~iwd~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~gs 247 (264)
|++||+++++.+..+.. ...+.++.+++ ..+++++.|+.|++||+++++++..+..+.... .+.+ ++.+|++|+
T Consensus 278 i~vwd~~~~~~~~~~~~~~~~v~~~~~~~-~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~---~~~~l~sg~ 353 (435)
T 1p22_A 278 IKVWNTSTCEFVRTLNGHKRGIACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF---DNKRIVSGA 353 (435)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEEET-TEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC---CSSEEEEEE
T ss_pred EEEEECCcCcEEEEEcCCCCcEEEEEeCC-CEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe---cCCEEEEEe
Confidence 99999999999888864 46788888853 234456678999999999999988887654433 3333 478999999
Q ss_pred CCCeEEEEEcCcce
Q 024676 248 EDMWVHVFDFHTGE 261 (264)
Q Consensus 248 ~d~~v~vwd~~~g~ 261 (264)
.|+.|++||+.+++
T Consensus 354 ~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 354 YDGKIKVWDLVAAL 367 (435)
T ss_dssp TTSCEEEEEHHHHT
T ss_pred CCCcEEEEECCCCC
Confidence 99999999987654
No 90
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-33 Score=234.38 Aligned_cols=226 Identities=10% Similarity=0.054 Sum_probs=179.4
Q ss_pred CCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCC---------CCcEEEEe
Q 024676 29 PDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL---------TGDEKHSF 99 (264)
Q Consensus 29 ~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~---------~~~~~~~~ 99 (264)
+++++|++|+.|+.|++||..+++.+..+. ...|.++.++|+ +++++.|++|++|+.. ++..+...
T Consensus 46 ~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~ 120 (343)
T 3lrv_A 46 YDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREI 120 (343)
T ss_dssp EEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEe
Confidence 578899999999999999999998887776 567888888888 8999999999999765 44434443
Q ss_pred --ecCCeEEEEEECC--CCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEEC
Q 024676 100 --EHKHIVRACAFSE--DTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDA 175 (264)
Q Consensus 100 --~~~~~v~~~~~~~--~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~ 175 (264)
.|..+|.+++++| +++++++++.|+.+++||+++++........+...+.+++|.|++ .++++++.|+.|++||+
T Consensus 121 ~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg-~~lasg~~dg~i~iwd~ 199 (343)
T 3lrv_A 121 EVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDS-LLLALYSPDGILDVYNL 199 (343)
T ss_dssp ECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTS-CEEEEECTTSCEEEEES
T ss_pred ecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCC-CEEEEEcCCCEEEEEEC
Confidence 3557899999999 999999999999999999987765322334456679999998855 56777888899999999
Q ss_pred CCCcee-EEecC--CCCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeeeEEec---CCC---CceeeEcCCCCCEEEEe
Q 024676 176 RSGKIV-QTLET--KSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNM---PCN---TESASLEPKLGNIFIAG 246 (264)
Q Consensus 176 ~~~~~~-~~~~~--~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~g 246 (264)
++++.+ ..+.. ..+|.+++|+|++.+|+++.++.|++||+++.+.+..+.. +.. ...+++.| .+++|+++
T Consensus 200 ~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~ 278 (343)
T 3lrv_A 200 SSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDD-SGKNMIAY 278 (343)
T ss_dssp SCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECT-TSSEEEEE
T ss_pred CCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeecccccccccccceEEEECC-CCCEEEEe
Confidence 999877 66654 6789999999999988776666999999998876544331 111 12477777 58899998
Q ss_pred cC-CCeEEEEEcCcce
Q 024676 247 GE-DMWVHVFDFHTGE 261 (264)
Q Consensus 247 s~-d~~v~vwd~~~g~ 261 (264)
+. |+.+++|++.++.
T Consensus 279 s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 279 SNESNSLTIYKFDKKT 294 (343)
T ss_dssp ETTTTEEEEEEECTTT
T ss_pred cCCCCcEEEEEEcccc
Confidence 88 9999999986553
No 91
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=4.3e-32 Score=242.09 Aligned_cols=250 Identities=13% Similarity=0.189 Sum_probs=205.9
Q ss_pred ecceEeeccCCC-eeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCC--------ceEEeeeCCcCCEEEEEECCCCcEEE
Q 024676 7 AVPLVCHGHSRP-VVDLFYSPITPDGFFLVSASKDSSPMLRNGETG--------DWIGTFEGHKGAVWSCCLDANALFSA 77 (264)
Q Consensus 7 ~~~~~~~~h~~~-v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~--------~~~~~~~~H~~~V~~v~~~~~~~~l~ 77 (264)
.....+.+|..+ |.+++|+|. .++++|++|+.|+.|++|+..++ +.+..+.+|..+|.+++|+|++.+++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 132 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPI-KGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLC 132 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSS-TTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred ccceEEecCCCceEEEEEECcC-CCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEE
Confidence 355667899999 999999942 17889999999999999999755 56778899999999999999999999
Q ss_pred EecCC----CeEEEEeCCCCcEEEEe-ecCCeEEEEEECCCCC-EEEEeeCCCcEEEeeCCCCCCCCeEeccCCC---Ce
Q 024676 78 SGSAD----FTAKLWDALTGDEKHSF-EHKHIVRACAFSEDTH-LLLTGGFEKILRIFDLNRPDAPPREVGNSSG---SI 148 (264)
Q Consensus 78 s~s~D----~~v~iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~-~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~---~i 148 (264)
+++.| +.|++|| .+.....+ .|...|.+++|+|+++ ++++++.|+.+++||+++++.. ..+..+.. .+
T Consensus 133 ~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~-~~~~~~~~~~~~v 209 (615)
T 1pgu_A 133 VVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFS-ASDRTHHKQGSFV 209 (615)
T ss_dssp EEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEE-EEECSSSCTTCCE
T ss_pred EeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCccee-eeecccCCCCceE
Confidence 99988 7999999 44455554 4788999999999997 8999999999999998765533 33445667 89
Q ss_pred EEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEe-----cCCCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeee
Q 024676 149 RTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTL-----ETKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVK 222 (264)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~ 222 (264)
.+++|+|+++.++++++.|+.|++||+++++.+..+ .+..++.++.|+ ++.++++ +.++.|++||+++++.+.
T Consensus 210 ~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~ 288 (615)
T 1pgu_A 210 RDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQ 288 (615)
T ss_dssp EEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred EEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 999999873556777788899999999999999888 566789999999 8877655 568999999999999988
Q ss_pred EEecCC-----CCceeeEcCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 223 GYNMPC-----NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 223 ~~~~~~-----~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
.+..+. ......+ + .+.++++|+.|+.|++||+.+++.+
T Consensus 289 ~~~~~~~~~~~~~~~~~~-~-~~~~l~~~~~~g~i~~~d~~~~~~~ 332 (615)
T 1pgu_A 289 KWTLDKQQLGNQQVGVVA-T-GNGRIISLSLDGTLNFYELGHDEVL 332 (615)
T ss_dssp EEECCTTCGGGCEEEEEE-E-ETTEEEEEETTSCEEEEETTEEEEE
T ss_pred EEcCCCCcccCceeEEEe-C-CCCeEEEEECCCCEEEEECCCCcEE
Confidence 887652 2223333 3 5889999999999999999887654
No 92
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.6e-31 Score=230.69 Aligned_cols=241 Identities=27% Similarity=0.423 Sum_probs=198.0
Q ss_pred eecceEeeccCCCe-eeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCe
Q 024676 6 VAVPLVCHGHSRPV-VDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFT 84 (264)
Q Consensus 6 ~~~~~~~~~h~~~v-~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~ 84 (264)
+..+..+.||.+.| .++.+ +|++|++|+.|+.|++||..+++.+..+.+|.+.|.+++|+ +.++++|+.|++
T Consensus 108 ~~~~~~l~~h~~~v~~~~~~-----~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~ 180 (445)
T 2ovr_B 108 LKSPKVLKGHDDHVITCLQF-----CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRT 180 (445)
T ss_dssp CCCCEEEECSTTSCEEEEEE-----ETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSC
T ss_pred cceeEEecccCCCcEEEEEE-----cCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCe
Confidence 34566788999975 55544 57899999999999999999999999999999999999997 568999999999
Q ss_pred EEEEeCCCCcEEEEee-cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEE
Q 024676 85 AKLWDALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (264)
Q Consensus 85 v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 163 (264)
|++||+.+++....+. |...|.++.++ ++.+++|+.|+.+++||+++++.. .....+...+.++++ ++.++++
T Consensus 181 i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~-~~~~~~~~~v~~~~~---~~~~l~~ 254 (445)
T 2ovr_B 181 LKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCL-HVLMGHVAAVRCVQY---DGRRVVS 254 (445)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEE-EEEECCSSCEEEEEE---CSSCEEE
T ss_pred EEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEE-EEEcCCcccEEEEEE---CCCEEEE
Confidence 9999999998877775 78899999885 567999999999999999876543 344567888999987 3345677
Q ss_pred eeCCCeEEEEECCCCceeEEecC-CCCEEEEEEcCCCcEE-EEeCCCcEEEEECCCceeeeEEecCCCCceeeEcCCCCC
Q 024676 164 CTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYI-TTADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGN 241 (264)
Q Consensus 164 ~~~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~s~~~~~l-~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (264)
++.|+.|++||+++++++..+.. ..++.++.+ ++.++ +++.|+.|++||+++++.+..+..+..... .+.+ .+.
T Consensus 255 ~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~-~~~~-~~~ 330 (445)
T 2ovr_B 255 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS-GMEL-KDN 330 (445)
T ss_dssp EETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEE-EEEE-ETT
T ss_pred EcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEE-EEEE-eCC
Confidence 78889999999999999888864 467999988 56555 456789999999999998888865544322 2333 377
Q ss_pred EEEEecCCCeEEEEEcCcceee
Q 024676 242 IFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 242 ~~~~gs~d~~v~vwd~~~g~~i 263 (264)
++++|+.|+.|++||+.+++.+
T Consensus 331 ~l~~~~~dg~i~vwd~~~~~~~ 352 (445)
T 2ovr_B 331 ILVSGNADSTVKIWDIKTGQCL 352 (445)
T ss_dssp EEEEEETTSCEEEEETTTCCEE
T ss_pred EEEEEeCCCeEEEEECCCCcEE
Confidence 9999999999999999888754
No 93
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=6.9e-32 Score=248.62 Aligned_cols=249 Identities=20% Similarity=0.319 Sum_probs=207.7
Q ss_pred ceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEE
Q 024676 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLW 88 (264)
Q Consensus 9 ~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iw 88 (264)
...+.+|..+|.+++|+| +|++|++|+.|+.|++|+..+++.+..+.+|.+.|.+++|+|++.++++++.|++|++|
T Consensus 48 ~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw 124 (814)
T 3mkq_A 48 VRSIQVTETPVRAGKFIA---RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLW 124 (814)
T ss_dssp EEEEECCSSCEEEEEEEG---GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEE
T ss_pred EEEEecCCCcEEEEEEeC---CCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEE
Confidence 345568999999999997 89999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCC-cEEEEe-ecCCeEEEEEECC-CCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecC-CCeEEEEe
Q 024676 89 DALTG-DEKHSF-EHKHIVRACAFSE-DTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHS-DQTILSSC 164 (264)
Q Consensus 89 d~~~~-~~~~~~-~~~~~v~~~~~~~-~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~ 164 (264)
|+.++ .....+ .|..+|.+++|+| +++.+++++.|+.|++||++.+.........+...+..++|.|. ++.+++++
T Consensus 125 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ 204 (814)
T 3mkq_A 125 NWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITA 204 (814)
T ss_dssp EGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEE
T ss_pred ECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEE
Confidence 99887 444444 4788999999999 88899999999999999998776655555555578999999872 34467777
Q ss_pred eCCCeEEEEECCCCceeEEec-CCCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEecCC-CCceeeEcCCCCC
Q 024676 165 TDSGGVRLWDARSGKIVQTLE-TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPC-NTESASLEPKLGN 241 (264)
Q Consensus 165 ~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 241 (264)
+.|+.|++||+++++++..+. +..++.+++|+|++.++++ +.|+.|++||+.+++.+..+..+. ....+.+.|+...
T Consensus 205 ~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 284 (814)
T 3mkq_A 205 SDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRK 284 (814)
T ss_dssp CTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGG
T ss_pred eCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCc
Confidence 888999999999999888776 4567999999999987665 568999999999998888887654 4456677776444
Q ss_pred EEEEecCCCeEEEEEcCcc
Q 024676 242 IFIAGGEDMWVHVFDFHTG 260 (264)
Q Consensus 242 ~~~~gs~d~~v~vwd~~~g 260 (264)
.+++.+.|+.+.+|++..+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~ 303 (814)
T 3mkq_A 285 NYIASGFDNGFTVLSLGND 303 (814)
T ss_dssp GEEEEEETTEEEEEECSCC
T ss_pred eEEEEEeCCCEEEEEcCCC
Confidence 4455555777999987654
No 94
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=6.9e-31 Score=222.53 Aligned_cols=245 Identities=14% Similarity=0.125 Sum_probs=202.9
Q ss_pred eeccCCCeeeeEeccCCCCCeEE-EEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEE-EEecCCCeEEEEe
Q 024676 12 CHGHSRPVVDLFYSPITPDGFFL-VSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFS-ASGSADFTAKLWD 89 (264)
Q Consensus 12 ~~~h~~~v~~~~~~~~~~~g~~l-~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l-~s~s~D~~v~iwd 89 (264)
+.+|. .+.+++|+| +|++| ++++.|+.+++||..+++.+..+..|. .+.+++|+|++.++ ++++.|+.|++||
T Consensus 28 ~~~~~-~~~~~~~s~---dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d 102 (391)
T 1l0q_A 28 IPVGS-NPMGAVISP---DGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVID 102 (391)
T ss_dssp EECSS-SEEEEEECT---TSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred eecCC-CcceEEECC---CCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEE
Confidence 34554 478999996 88766 788899999999999999988888665 89999999999876 5677789999999
Q ss_pred CCCCcEEEEeecCCeEEEEEECCCCCEE-EEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCC
Q 024676 90 ALTGDEKHSFEHKHIVRACAFSEDTHLL-LTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSG 168 (264)
Q Consensus 90 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~ 168 (264)
+.+++.+..+.+...+..++|+|+++.+ ++++.|+.|++||+++++.... . .....+..++|.+++..+++++..++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~-~-~~~~~~~~~~~~~dg~~l~~~~~~~~ 180 (391)
T 1l0q_A 103 TTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINT-V-SVGRSPKGIAVTPDGTKVYVANFDSM 180 (391)
T ss_dssp TTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE-E-ECCSSEEEEEECTTSSEEEEEETTTT
T ss_pred CCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE-E-ecCCCcceEEECCCCCEEEEEeCCCC
Confidence 9999988888877889999999999977 6778899999999987654322 2 22346788999998888777888889
Q ss_pred eEEEEECCCCceeEEecCCCCEEEEEEcCCCcEEEE-e---CCCcEEEEECCCceeeeEEecCCCCceeeEcCCCCCEEE
Q 024676 169 GVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITT-A---DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFI 244 (264)
Q Consensus 169 ~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~---~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (264)
.|++||+++++++..+.....+.+++++|++++++. + .++.|++||+++++.+..+..+..+..+.+.++...+++
T Consensus 181 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 260 (391)
T 1l0q_A 181 SISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYV 260 (391)
T ss_dssp EEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEE
T ss_pred EEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCCCEEEE
Confidence 999999999998888877778999999999987654 3 468999999999998888877666667788885334557
Q ss_pred EecCCCeEEEEEcCcceee
Q 024676 245 AGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 245 ~gs~d~~v~vwd~~~g~~i 263 (264)
+++.|+.|++||+.+++.+
T Consensus 261 s~~~d~~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 261 ALSFXNTVSVIDTATNTIT 279 (391)
T ss_dssp EETTTTEEEEEETTTTEEE
T ss_pred EcCCCCEEEEEECCCCcEE
Confidence 8899999999999988764
No 95
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.6e-32 Score=233.99 Aligned_cols=242 Identities=14% Similarity=0.179 Sum_probs=186.1
Q ss_pred cceEeeccC------------CCeeeeEeccCCCCC--eEEEEEeCCCCcEEEeCCCCceE-------------------
Q 024676 8 VPLVCHGHS------------RPVVDLFYSPITPDG--FFLVSASKDSSPMLRNGETGDWI------------------- 54 (264)
Q Consensus 8 ~~~~~~~h~------------~~v~~~~~~~~~~~g--~~l~t~s~d~~v~i~~~~~~~~~------------------- 54 (264)
....+.+|. .+|.+|+|+| ++ .+|++++.|+.|++|++.+++..
T Consensus 73 ~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~---~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~ 149 (447)
T 3dw8_B 73 VYSTFQSHEPEFDYLKSLEIEEKINKIRWLP---QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTV 149 (447)
T ss_dssp EEEEEECCCCEEEGGGTEEECCCCCEEEECC---CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCC
T ss_pred EecccccccccccccccccccCceEEEEEcC---CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccc
Confidence 344567898 8899999997 55 78999999999999998764321
Q ss_pred --------------------Ee-eeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCC-CcEEEEe--------ecCCe
Q 024676 55 --------------------GT-FEGHKGAVWSCCLDANALFSASGSADFTAKLWDALT-GDEKHSF--------EHKHI 104 (264)
Q Consensus 55 --------------------~~-~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~-~~~~~~~--------~~~~~ 104 (264)
+. +.+|...|.+++|+|++.++++| .|++|++||+.+ +.....+ .|...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 228 (447)
T 3dw8_B 150 TTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEV 228 (447)
T ss_dssp CSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCC
T ss_pred cceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcc
Confidence 12 36899999999999999999998 799999999984 3344432 47788
Q ss_pred EEEEEECCCC-CEEEEeeCCCcEEEeeCCCCCCC---CeEeccCCC------------CeEEEEEecCCCeEEEEeeCCC
Q 024676 105 VRACAFSEDT-HLLLTGGFEKILRIFDLNRPDAP---PREVGNSSG------------SIRTVAWLHSDQTILSSCTDSG 168 (264)
Q Consensus 105 v~~~~~~~~~-~~l~s~~~d~~i~~~d~~~~~~~---~~~~~~~~~------------~i~~~~~~~~~~~~~~~~~~d~ 168 (264)
|.+++|+|++ ++|++|+.|+.|++||+++++.. ...+..+.. .+.+++|+|++. +++++++ +
T Consensus 229 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~-~ 306 (447)
T 3dw8_B 229 ITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR-YMMTRDY-L 306 (447)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS-EEEEEES-S
T ss_pred eEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCC-EEEEeeC-C
Confidence 9999999998 99999999999999999876641 244444443 899999998655 5666777 9
Q ss_pred eEEEEECCC-CceeEEecCCCC----------------EEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEE------
Q 024676 169 GVRLWDARS-GKIVQTLETKSP----------------VTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGY------ 224 (264)
Q Consensus 169 ~v~iwd~~~-~~~~~~~~~~~~----------------v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~------ 224 (264)
.|++||+++ ++++..+..+.. +..++|+|++++|++ +.|+.|++||+++++.+...
T Consensus 307 ~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~ 386 (447)
T 3dw8_B 307 SVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENN 386 (447)
T ss_dssp EEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTC
T ss_pred eEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeeccccc
Confidence 999999997 777766655433 234899999988766 45899999999988765311
Q ss_pred ---------------------------ecCCCCceeeEcCCCCCEEEEecCCCeEEEEEc
Q 024676 225 ---------------------------NMPCNTESASLEPKLGNIFIAGGEDMWVHVFDF 257 (264)
Q Consensus 225 ---------------------------~~~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~ 257 (264)
.+.......+++|. +.+|++++.|+ +++|..
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~-~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 387 KPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPK-ENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp CTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSS-SSEEEEECSSC-EEEEEC
T ss_pred ccccccCCccccccCCcccccccccccccCCceeEEEECCC-CCEEEEEecce-eeeecc
Confidence 11223345678884 88999998876 788864
No 96
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=9.9e-32 Score=231.51 Aligned_cols=237 Identities=18% Similarity=0.300 Sum_probs=189.4
Q ss_pred cceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEE
Q 024676 8 VPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKL 87 (264)
Q Consensus 8 ~~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~i 87 (264)
....+.+|..+|.++.| ++++|++|+.|+.|++||..+++.+..+.+|.+.|.+++|++ .++++|+.|++|++
T Consensus 165 ~~~~~~~h~~~v~~l~~-----~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~v 237 (435)
T 1p22_A 165 CKRILTGHTGSVLCLQY-----DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAV 237 (435)
T ss_dssp EEEEECCCSSCEEEEEC-----CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEE
T ss_pred EEEEEcCCCCcEEEEEE-----CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEE
Confidence 34556799999999988 467999999999999999999999999999999999999974 58899999999999
Q ss_pred EeCCCCcEE---E-EeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEE
Q 024676 88 WDALTGDEK---H-SFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (264)
Q Consensus 88 wd~~~~~~~---~-~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 163 (264)
||+.++... . ...|...|.++.+ +++++++|+.|+.|++||+++++.. .....+...+.++++. +.++++
T Consensus 238 wd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~~~~v~~~~~~---~~~l~~ 311 (435)
T 1p22_A 238 WDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFV-RTLNGHKRGIACLQYR---DRLVVS 311 (435)
T ss_dssp EECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEE-EEEECCSSCEEEEEEE---TTEEEE
T ss_pred EeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEE-EEEcCCCCcEEEEEeC---CCEEEE
Confidence 999887643 2 2347889999988 6789999999999999999877543 3445677889988874 346777
Q ss_pred eeCCCeEEEEECCCCceeEEecC-CCCEEEEEEcCCCcEEE-EeCCCcEEEEECCCce---------eeeEEecCCC-Cc
Q 024676 164 CTDSGGVRLWDARSGKIVQTLET-KSPVTSAEVSRDGRYIT-TADGSSVKFWDANHFG---------LVKGYNMPCN-TE 231 (264)
Q Consensus 164 ~~~d~~v~iwd~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~-~~~~~~i~iwd~~~~~---------~~~~~~~~~~-~~ 231 (264)
++.|+.|++||+++++++..+.. ..++.++.+ ++.+++ ++.|+.|++||+++.. ++..+..+.. ..
T Consensus 312 g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~ 389 (435)
T 1p22_A 312 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVF 389 (435)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCC
T ss_pred EeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeE
Confidence 88889999999999999888874 467998888 555654 5678999999997765 6666655433 44
Q ss_pred eeeEcCCCCCEEEEecCCCeEEEEEcCccee
Q 024676 232 SASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (264)
Q Consensus 232 ~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~ 262 (264)
.+.+ ++.+|++|+.|+.|++||+.++++
T Consensus 390 ~l~~---~~~~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 390 RLQF---DEFQIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp CEEE---CSSCEEECCSSSEEEEEC------
T ss_pred EEEe---CCCEEEEEeCCCEEEEEECCCCCC
Confidence 4555 477899999999999999977654
No 97
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=5.9e-31 Score=227.13 Aligned_cols=237 Identities=24% Similarity=0.388 Sum_probs=195.0
Q ss_pred eEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEe
Q 024676 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (264)
Q Consensus 10 ~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd 89 (264)
..+.+|..+|.++.|+ +++|++|+.|+.|++||..+++.+..+.+|.+.|.+++|+ +..+++|+.|++|++||
T Consensus 153 ~~~~~h~~~v~~~~~~-----~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd 225 (445)
T 2ovr_B 153 RTLVGHTGGVWSSQMR-----DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWD 225 (445)
T ss_dssp EECCCCSSCEEEEEEE-----TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEE
T ss_pred EEEcCCCCCEEEEEec-----CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEE
Confidence 4457999999999997 3589999999999999999999999999999999999995 56789999999999999
Q ss_pred CCCCcEEEEee-cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCC
Q 024676 90 ALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSG 168 (264)
Q Consensus 90 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~ 168 (264)
+.+++....+. |..+|.++.+ +++++++++.|+.|++||+++++.. .....+...+.++++ ++..+++++.|+
T Consensus 226 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~v~~~~~---~~~~l~~~~~d~ 299 (445)
T 2ovr_B 226 IETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCL-HTLQGHTNRVYSLQF---DGIHVVSGSLDT 299 (445)
T ss_dssp SSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEE-EEECCCSSCEEEEEE---CSSEEEEEETTS
T ss_pred CCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEe-EEecCCCCceEEEEE---CCCEEEEEeCCC
Confidence 99998777764 7889999988 6788999999999999999876533 344457788999887 344677778889
Q ss_pred eEEEEECCCCceeEEecCC-CCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeeeEEecC----CCCceeeEcCCCCCEE
Q 024676 169 GVRLWDARSGKIVQTLETK-SPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMP----CNTESASLEPKLGNIF 243 (264)
Q Consensus 169 ~v~iwd~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 243 (264)
.|++||+++++++..+..+ ..+.++.++++ .+++++.|+.|++||+++++.+..+..+ .....+.+ .+.++
T Consensus 300 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l 375 (445)
T 2ovr_B 300 SIRVWDVETGNCIHTLTGHQSLTSGMELKDN-ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF---NKNFV 375 (445)
T ss_dssp CEEEEETTTCCEEEEECCCCSCEEEEEEETT-EEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEE---CSSEE
T ss_pred eEEEEECCCCCEEEEEcCCcccEEEEEEeCC-EEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEE---CCCEE
Confidence 9999999999998888654 45777776432 3445567899999999999988888752 12233444 36899
Q ss_pred EEecCCCeEEEEEcCcceee
Q 024676 244 IAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 244 ~~gs~d~~v~vwd~~~g~~i 263 (264)
++|+.|+.|++||+.+|+.+
T Consensus 376 ~s~~~dg~v~iwd~~~~~~~ 395 (445)
T 2ovr_B 376 ITSSDDGTVKLWDLKTGEFI 395 (445)
T ss_dssp EEEETTSEEEEEETTTCCEE
T ss_pred EEEeCCCeEEEEECCCCcee
Confidence 99999999999999998764
No 98
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-31 Score=228.26 Aligned_cols=239 Identities=10% Similarity=0.068 Sum_probs=192.1
Q ss_pred CCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCc---eEEeeeC---------------------------------
Q 024676 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD---WIGTFEG--------------------------------- 59 (264)
Q Consensus 16 ~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~---~~~~~~~--------------------------------- 59 (264)
..|+.+|+|+| +|++|+++ .++.|++|+..+|+ .+..+..
T Consensus 4 ~~p~~~v~~s~---dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (450)
T 2vdu_B 4 IHPLQNLLTSR---DGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSN 79 (450)
T ss_dssp ECCCCEEEECS---SSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-------------------------------
T ss_pred cccEEEEEecC---CCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccC
Confidence 46789999996 88876655 57899999999998 6555543
Q ss_pred ---------------------CcCCEEEEEECCCCcEE-EEecCCCeEEEEeCC--CCcEEEEe---ecCCeEEEEEECC
Q 024676 60 ---------------------HKGAVWSCCLDANALFS-ASGSADFTAKLWDAL--TGDEKHSF---EHKHIVRACAFSE 112 (264)
Q Consensus 60 ---------------------H~~~V~~v~~~~~~~~l-~s~s~D~~v~iwd~~--~~~~~~~~---~~~~~v~~~~~~~ 112 (264)
|.+.|.+++|+|++.+| ++|+.|++|++||+. ++..+..+ .+...|.+++|+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp 159 (450)
T 2vdu_B 80 KGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE 159 (450)
T ss_dssp --------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT
T ss_pred cCccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC
Confidence 44479999999999996 999999999999998 77766665 4678899999999
Q ss_pred CCCEEEEeeCCCcEEEeeCCCCCCCC---eEeccCCCCeEEEEEecC--CCeEEEEeeCCCeEEEEECCCCceeEEe--c
Q 024676 113 DTHLLLTGGFEKILRIFDLNRPDAPP---REVGNSSGSIRTVAWLHS--DQTILSSCTDSGGVRLWDARSGKIVQTL--E 185 (264)
Q Consensus 113 ~~~~l~s~~~d~~i~~~d~~~~~~~~---~~~~~~~~~i~~~~~~~~--~~~~~~~~~~d~~v~iwd~~~~~~~~~~--~ 185 (264)
++++|++++.++.+++|++..+.... .....|.+.+.+++|+|+ ++.++++++.|+.|++||+++++++..+ .
T Consensus 160 ~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~ 239 (450)
T 2vdu_B 160 DDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFG 239 (450)
T ss_dssp TSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCC
T ss_pred CCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecC
Confidence 99999999999999999997765432 133457789999999986 2556778888899999999999888764 3
Q ss_pred CCCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEecC--------------------------CCCceeeEcCC
Q 024676 186 TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMP--------------------------CNTESASLEPK 238 (264)
Q Consensus 186 ~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~--------------------------~~~~~~~~~~~ 238 (264)
+..+|.+++|+ ++++|++ +.|+.|++||+++++++..+..+ .....+.+.+
T Consensus 240 h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~- 317 (450)
T 2vdu_B 240 HKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK- 317 (450)
T ss_dssp CSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS-
T ss_pred CCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC-
Confidence 55789999999 9987765 56899999999999888877632 1223456666
Q ss_pred CCCEEEEec-CCCeEEEEEc--Ccc
Q 024676 239 LGNIFIAGG-EDMWVHVFDF--HTG 260 (264)
Q Consensus 239 ~~~~~~~gs-~d~~v~vwd~--~~g 260 (264)
+++++++++ .|+.|++|++ .++
T Consensus 318 ~~~~l~~~~~~d~~i~iw~~~~~~~ 342 (450)
T 2vdu_B 318 NLPFVAFFVEATKCIIILEMSEKQK 342 (450)
T ss_dssp SSSEEEEEETTCSEEEEEEECSSST
T ss_pred CCCEEEEEECCCCeEEEEEeccCCC
Confidence 478888887 8999999999 544
No 99
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.7e-31 Score=221.89 Aligned_cols=233 Identities=13% Similarity=0.071 Sum_probs=192.1
Q ss_pred ceEeeccCCCeeeeEeccCCCCCe-EEEEEeCCCCcEEEeC-CCCceEEeeeC--CcCCEEEEEECCCCcEEEEecCCCe
Q 024676 9 PLVCHGHSRPVVDLFYSPITPDGF-FLVSASKDSSPMLRNG-ETGDWIGTFEG--HKGAVWSCCLDANALFSASGSADFT 84 (264)
Q Consensus 9 ~~~~~~h~~~v~~~~~~~~~~~g~-~l~t~s~d~~v~i~~~-~~~~~~~~~~~--H~~~V~~v~~~~~~~~l~s~s~D~~ 84 (264)
+....+|..+|.+++|+| +++ +|++|+.|+.|++|+. .+++. ..+.+ |.+.|.+++|++ +.++++++.|+.
T Consensus 49 ~~~~~~~~~~v~~~~~~~---~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~ 123 (342)
T 1yfq_A 49 LLQSLRYKHPLLCCNFID---NTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGL 123 (342)
T ss_dssp EEEEEECSSCEEEEEEEE---SSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSE
T ss_pred ceeeeecCCceEEEEECC---CCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCe
Confidence 445568999999999997 789 9999999999999999 87765 67888 999999999999 999999999999
Q ss_pred EEEEeCCC---------CcEEEEeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCC-CCCCC-eEeccCCCCeEEEEE
Q 024676 85 AKLWDALT---------GDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNR-PDAPP-REVGNSSGSIRTVAW 153 (264)
Q Consensus 85 v~iwd~~~---------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~-~~~~~-~~~~~~~~~i~~~~~ 153 (264)
|++||+.+ ++.+..+.|...+.+++|+|++ +++++.|+.+++||++. +.... .....+...+.+++|
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~ 201 (342)
T 1yfq_A 124 IEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVAL 201 (342)
T ss_dssp EEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEE
T ss_pred EEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEE
Confidence 99999887 6666667788899999999987 88999999999999987 54433 234456778999999
Q ss_pred ec-CCCeEEEEeeCCCeEEEEECCCC------ceeEEecCC----------CCEEEEEEcCCCcEEEE-eCCCcEEEEEC
Q 024676 154 LH-SDQTILSSCTDSGGVRLWDARSG------KIVQTLETK----------SPVTSAEVSRDGRYITT-ADGSSVKFWDA 215 (264)
Q Consensus 154 ~~-~~~~~~~~~~~d~~v~iwd~~~~------~~~~~~~~~----------~~v~~~~~s~~~~~l~~-~~~~~i~iwd~ 215 (264)
+| ++. ++++++.|+.|++||++.. +....+..+ .++.+++|+|++++|++ +.++.|++||+
T Consensus 202 ~~~~~~-~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~ 280 (342)
T 1yfq_A 202 LPKEQE-GYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNL 280 (342)
T ss_dssp CSGGGC-EEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEET
T ss_pred CCCCCC-EEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcC
Confidence 88 655 5666778899999999887 666666543 28999999999987655 56899999999
Q ss_pred CCceeeeEEecC-CCCceeeEcCCCCCEEEEecCCCe
Q 024676 216 NHFGLVKGYNMP-CNTESASLEPKLGNIFIAGGEDMW 251 (264)
Q Consensus 216 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~gs~d~~ 251 (264)
++++.+..+..+ ........ + ++.+|++||.|++
T Consensus 281 ~~~~~~~~~~~~h~~~v~~~~-~-~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 281 QTRKKIKNFAKFNEDSVVKIA-C-SDNILCLATSDDT 315 (342)
T ss_dssp TTTEEEEECCCCSSSEEEEEE-E-CSSEEEEEEECTH
T ss_pred ccHhHhhhhhcccCCCceEec-C-CCCeEEEEecCCc
Confidence 999988887654 43332222 4 6899999999998
No 100
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.2e-30 Score=222.21 Aligned_cols=236 Identities=16% Similarity=0.241 Sum_probs=191.2
Q ss_pred eeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeee--CCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEE
Q 024676 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFE--GHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEK 96 (264)
Q Consensus 19 v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~--~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~ 96 (264)
++.|+|++ ++.||+|. |++|++||..+|+.++.+. +|.+.|.+|+|+|++.++++|+.|++|+|||+.+++.+
T Consensus 108 ~~~l~wS~----~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~ 182 (420)
T 4gga_A 108 LNLVDWSS----GNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 182 (420)
T ss_dssp CBCEEECT----TSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred ceeEEECC----CCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEE
Confidence 56688884 35777665 9999999999999877654 67889999999999999999999999999999999887
Q ss_pred EEee-cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEEC
Q 024676 97 HSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDA 175 (264)
Q Consensus 97 ~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~ 175 (264)
..+. |...+.++.++ +.++++|+.|+.+++||.............|...+..+.+.+.+. ++++++.|+.+++||.
T Consensus 183 ~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~-~l~s~~~D~~v~i~~~ 259 (420)
T 4gga_A 183 RNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGR-HLASGGNDNLVNVWPS 259 (420)
T ss_dssp EEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEES
T ss_pred EEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCC-eeeeeeccccceEEee
Confidence 7765 77788887664 679999999999999998876555555667888999999887665 5667788899999999
Q ss_pred CCCce----eEEe-cCCCCEEEEEEcCCC-cEEEE--e-CCCcEEEEECCCceeeeEEecCCCCceeeEcCCCCCEEEE-
Q 024676 176 RSGKI----VQTL-ETKSPVTSAEVSRDG-RYITT--A-DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIA- 245 (264)
Q Consensus 176 ~~~~~----~~~~-~~~~~v~~~~~s~~~-~~l~~--~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 245 (264)
++++. +... .+...|.+++++|++ .++++ + .|+.|++||++++.++..+..+.......+.+. +..+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~-~~~lv~~ 338 (420)
T 4gga_A 260 APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPH-YKELISG 338 (420)
T ss_dssp SCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETT-TTEEEEE
T ss_pred ccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCC-CCeEEEE
Confidence 88753 2333 455679999999976 44443 2 478999999999999999888877778888886 455554
Q ss_pred -ecCCCeEEEEEcCcceee
Q 024676 246 -GGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 246 -gs~d~~v~vwd~~~g~~i 263 (264)
|+.|+.|++||+.+++++
T Consensus 339 sg~~d~~I~iwd~~~~~~v 357 (420)
T 4gga_A 339 HGFAQNQLVIWKYPTMAKV 357 (420)
T ss_dssp ECTTTCCEEEEETTTCCEE
T ss_pred EecCCCEEEEEECCCCcEE
Confidence 347999999999998875
No 101
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-31 Score=228.88 Aligned_cols=240 Identities=11% Similarity=0.079 Sum_probs=193.8
Q ss_pred eccCCCeeeeEeccCCCCCeEE-EEEeCCCCcEEEeCC--CCceEEeee--CCcCCEEEEEECCCCcEEEEecCCCeEEE
Q 024676 13 HGHSRPVVDLFYSPITPDGFFL-VSASKDSSPMLRNGE--TGDWIGTFE--GHKGAVWSCCLDANALFSASGSADFTAKL 87 (264)
Q Consensus 13 ~~h~~~v~~~~~~~~~~~g~~l-~t~s~d~~v~i~~~~--~~~~~~~~~--~H~~~V~~v~~~~~~~~l~s~s~D~~v~i 87 (264)
.+|...|.+++|+| +|++| ++|+.|+.|++|++. +++.+..+. .|...|.+++|+|++.++++|+.|+.+++
T Consensus 99 ~~~~~~v~~~~~s~---d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~ 175 (450)
T 2vdu_B 99 PPIYSYIRNLRLTS---DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYS 175 (450)
T ss_dssp -CCCCCEEEEEECT---TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CccCCceEEEEEcC---CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEE
Confidence 46888999999996 88886 999999999999998 888888876 57789999999999999999999999999
Q ss_pred EeCCCCcEEE----E-eecCCeEEEEEECCC---CCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCe
Q 024676 88 WDALTGDEKH----S-FEHKHIVRACAFSED---THLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQT 159 (264)
Q Consensus 88 wd~~~~~~~~----~-~~~~~~v~~~~~~~~---~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 159 (264)
|++.++.... . ..|...|.+++|+|+ +++|++++.|+.|++||+++++........|.+.+.+++|+ ++.
T Consensus 176 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s--d~~ 253 (450)
T 2vdu_B 176 IDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG--KDY 253 (450)
T ss_dssp EETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC--STT
T ss_pred EecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC--CCC
Confidence 9998776442 3 347889999999999 99999999999999999987765444355688899999998 455
Q ss_pred EEEEeeCCCeEEEEECCCCceeEEecC--------------------------CCCEEEEEEcCCCcEEEEe--CCCcEE
Q 024676 160 ILSSCTDSGGVRLWDARSGKIVQTLET--------------------------KSPVTSAEVSRDGRYITTA--DGSSVK 211 (264)
Q Consensus 160 ~~~~~~~d~~v~iwd~~~~~~~~~~~~--------------------------~~~v~~~~~s~~~~~l~~~--~~~~i~ 211 (264)
++++++.|+.|++||+++++++..+.. ...+..+.++|++++++++ .++.|+
T Consensus 254 ~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~ 333 (450)
T 2vdu_B 254 LLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCII 333 (450)
T ss_dssp EEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEE
Confidence 677778889999999999998776642 2458899999999887654 578999
Q ss_pred EEEC--CCc---eeeeEEecCCCCceeeEcCCCCCEEEEecC------CCeEEEEEcC
Q 024676 212 FWDA--NHF---GLVKGYNMPCNTESASLEPKLGNIFIAGGE------DMWVHVFDFH 258 (264)
Q Consensus 212 iwd~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~------d~~v~vwd~~ 258 (264)
+|++ ... +.+..+..+..+..+.+.+ .+.++++++. +..|.+|.++
T Consensus 334 iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~-~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 334 ILEMSEKQKGDLALKQIITFPYNVISLSAHN-DEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp EEEECSSSTTCEEEEEEEECSSCEEEEEEET-TEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred EEEeccCCCCceeeccEeccCCceEEEEecC-CcEEEEEecccCCCCCCcceEEEEEE
Confidence 9999 544 6677777776667778887 3434444443 5558888654
No 102
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-32 Score=254.96 Aligned_cols=247 Identities=15% Similarity=0.108 Sum_probs=190.3
Q ss_pred eeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceE--Eee----e-----CCcCCEEEEEECCCCcEEEEec
Q 024676 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWI--GTF----E-----GHKGAVWSCCLDANALFSASGS 80 (264)
Q Consensus 12 ~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~--~~~----~-----~H~~~V~~v~~~~~~~~l~s~s 80 (264)
+.||...+..++|+| +|++|++|+.|++|++||+.++... ..+ . +|...|.+++|+||+++||+|+
T Consensus 431 l~G~~~~v~sv~~sp---dg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs 507 (902)
T 2oaj_A 431 LKGGVRTKRQKLPAE---YGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSI 507 (902)
T ss_dssp CCCSBCCCCCCCCCS---EEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEE
T ss_pred ccCCcCCCCcccccc---cCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEe
Confidence 467777777777775 9999999999999999999887531 112 2 8999999999999999999999
Q ss_pred CCCeEEEEeCCCCc---------------------------------------------EEEEee-cCCeEEEEEECCCC
Q 024676 81 ADFTAKLWDALTGD---------------------------------------------EKHSFE-HKHIVRACAFSEDT 114 (264)
Q Consensus 81 ~D~~v~iwd~~~~~---------------------------------------------~~~~~~-~~~~v~~~~~~~~~ 114 (264)
.|++|+|||+.+++ ++..+. |..+|++++|+|++
T Consensus 508 ~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG 587 (902)
T 2oaj_A 508 ETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG 587 (902)
T ss_dssp TTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS
T ss_pred cCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc
Confidence 99999999987652 234443 88899999999999
Q ss_pred CEEEEeeCCCcEEEeeCCCCCCCCe----Eec-cCCCCeEEEEEe-----cCC--CeEEEEeeCCCeEEEEEC---CCCc
Q 024676 115 HLLLTGGFEKILRIFDLNRPDAPPR----EVG-NSSGSIRTVAWL-----HSD--QTILSSCTDSGGVRLWDA---RSGK 179 (264)
Q Consensus 115 ~~l~s~~~d~~i~~~d~~~~~~~~~----~~~-~~~~~i~~~~~~-----~~~--~~~~~~~~~d~~v~iwd~---~~~~ 179 (264)
+|++|+.|++|++||++++..... ... .|.+.|++++|+ |++ ...+++++.|++|++||+ .+|+
T Consensus 588 -~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~ 666 (902)
T 2oaj_A 588 -FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGK 666 (902)
T ss_dssp -EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGC
T ss_pred -EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCc
Confidence 999999999999999876543211 121 567789999999 865 467888899999999999 7887
Q ss_pred eeEEecC------CCCEEEEE-Ec----------------------CCCcEEEEeCCCcEEEEECCCceeeeEEecC-CC
Q 024676 180 IVQTLET------KSPVTSAE-VS----------------------RDGRYITTADGSSVKFWDANHFGLVKGYNMP-CN 229 (264)
Q Consensus 180 ~~~~~~~------~~~v~~~~-~s----------------------~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~-~~ 229 (264)
++..+.. ..+|.++. ++ +++.+++++ +..||+|++.++++.++...+ +.
T Consensus 667 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~-~~~ir~~~~~~~k~~~k~~~~~~~ 745 (902)
T 2oaj_A 667 FDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG-FDDIRLITLGKSKSTHKGFKYPLA 745 (902)
T ss_dssp EEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC-SSEEEEECTTCCCEEEEECSSCEE
T ss_pred EEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe-ccceEEEeCccccceeeEccccee
Confidence 7655532 35666565 54 566666666 679999999998887666322 22
Q ss_pred Ccee--eE------cCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 230 TESA--SL------EPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 230 ~~~~--~~------~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
..+. .. +...+..|++++.|+.|++|++-+++++
T Consensus 746 ~~~v~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~s~p~l~~~ 787 (902)
T 2oaj_A 746 ATGLSYISTVEKNNDRKNLTVIITLEINGHLRVFTIPDFKEQ 787 (902)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEEEETTSEEEEEETTTCCEE
T ss_pred eeEEEEEEeccccccccCceEEEEEeCCCcEEEEECcchHHH
Confidence 2222 01 2234789999999999999999888875
No 103
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-31 Score=223.33 Aligned_cols=248 Identities=19% Similarity=0.319 Sum_probs=194.9
Q ss_pred eeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCc--eEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEe
Q 024676 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (264)
Q Consensus 12 ~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~--~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd 89 (264)
..+|..+|.+|+|+| +|++|++|+.|+++++|+..+++ .+..+.+|.+.|.+++|+|++.+|++|+.|++|++||
T Consensus 57 ~~~h~~~v~~~~~sp---~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd 133 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSP---CGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWE 133 (345)
T ss_dssp CSSCSSCEEEEEECT---TSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ccccCCcEEEEEECC---CCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEE
Confidence 368999999999996 89999999999999999988774 5678999999999999999999999999999999999
Q ss_pred CCCCcE---EEEe-ecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCC-CeEeccCCCCeEEEEEecCCCeEEEEe
Q 024676 90 ALTGDE---KHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAP-PREVGNSSGSIRTVAWLHSDQTILSSC 164 (264)
Q Consensus 90 ~~~~~~---~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~ 164 (264)
+.++.. ...+ .|...|..++|+|++++|++++.|+.|++||++.++.. ...+..|...+.+++|+|++. +++++
T Consensus 134 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~-~l~s~ 212 (345)
T 3fm0_A 134 VDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQ-RLASC 212 (345)
T ss_dssp ECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSS-EEEEE
T ss_pred CCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCC-EEEEE
Confidence 987643 2333 47889999999999999999999999999998765422 234556888999999998654 67778
Q ss_pred eCCCeEEEEECCCC---------------ceeEEec--CCCCEEEEEEcCCCcEEE-EeCCCcEEEEECCCcee------
Q 024676 165 TDSGGVRLWDARSG---------------KIVQTLE--TKSPVTSAEVSRDGRYIT-TADGSSVKFWDANHFGL------ 220 (264)
Q Consensus 165 ~~d~~v~iwd~~~~---------------~~~~~~~--~~~~v~~~~~s~~~~~l~-~~~~~~i~iwd~~~~~~------ 220 (264)
+.|++|+|||.... +++..+. +...|.+++|+|++.+++ ++.|+.|++|+......
T Consensus 213 s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~ 292 (345)
T 3fm0_A 213 SDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTF 292 (345)
T ss_dssp ETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCE
T ss_pred eCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeE
Confidence 88999999996422 2233333 446799999999987665 56789999999865321
Q ss_pred -eeE--EecC-CCCceeeEcCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 221 -VKG--YNMP-CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 221 -~~~--~~~~-~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
+.. +..+ .....++|+|+...+|++||.|+.|++|++.+++..
T Consensus 293 ~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~ 339 (345)
T 3fm0_A 293 SLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGL 339 (345)
T ss_dssp EEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC----
T ss_pred EEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCc
Confidence 111 1122 335567888865579999999999999999887653
No 104
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.3e-30 Score=219.12 Aligned_cols=234 Identities=12% Similarity=0.192 Sum_probs=177.2
Q ss_pred eeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEE-EEecCCCeEEEEeC
Q 024676 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFS-ASGSADFTAKLWDA 90 (264)
Q Consensus 12 ~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l-~s~s~D~~v~iwd~ 90 (264)
..+|..+|.+|+|+| ||++|++|+.|+ +++|+..+++.+..... ..+..+++.+++..+ ++++.|++|++||.
T Consensus 15 ~~~h~~~V~~v~fs~---dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~ 88 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQ---DQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGVKEVVHIWDD 88 (355)
T ss_dssp ----CCCCCEEEECT---TSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSSTTEEEEEET
T ss_pred cccCCCceEEEEECC---CCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECCccEEEEEEC
Confidence 478999999999996 999999998775 68999887765544332 246778888877766 67888999999999
Q ss_pred CCCcEEEEeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCC-CCCCeEeccCCCCeEEEEEecCCCeEEEE-eeCCC
Q 024676 91 LTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRP-DAPPREVGNSSGSIRTVAWLHSDQTILSS-CTDSG 168 (264)
Q Consensus 91 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~d~ 168 (264)
.+++.+..+.+..+|..+.++++. +++ ..|+.+++||+.+. +....... +...+++.+ ..++++ ++.+|
T Consensus 89 ~~~~~~~~~~~~~~v~~v~~~~~~--~~~-~~~~~i~i~d~~~~~~~~~~~~~----~~~~~~~s~--~~la~~sg~~~g 159 (355)
T 3vu4_A 89 VKKQDVSRIKVDAPVKDLFLSREF--IVV-SYGDVISVFKFGNPWKRITDDIR----FGGVCEFSN--GLLVYSNEFNLG 159 (355)
T ss_dssp TTTEEEEEEECSSCEEEEEECSSE--EEE-EETTEEEEEESSTTCCBSSCCEE----EEEEEEEET--TEEEEEESSCTT
T ss_pred CCCcEEEEEECCCceEEEEEcCCE--EEE-EEcCEEEEEECCCCceeeEEecc----CCceEEEEc--cEEEEeCCCcCc
Confidence 999999999999999999998874 333 35789999999876 33322221 333445555 444444 67889
Q ss_pred eEEEEECCCCc----------------eeEEec-CCCCEEEEEEcCCCcEEEE-eCCCc-EEEEECCCceeeeEEe---c
Q 024676 169 GVRLWDARSGK----------------IVQTLE-TKSPVTSAEVSRDGRYITT-ADGSS-VKFWDANHFGLVKGYN---M 226 (264)
Q Consensus 169 ~v~iwd~~~~~----------------~~~~~~-~~~~v~~~~~s~~~~~l~~-~~~~~-i~iwd~~~~~~~~~~~---~ 226 (264)
.|++||+++++ ++..+. +..+|.+++|+|+|++|++ +.|++ |++||+++++++..+. .
T Consensus 160 ~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h 239 (355)
T 3vu4_A 160 QIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLD 239 (355)
T ss_dssp CEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTC
T ss_pred EEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC
Confidence 99999999865 144554 4567999999999988765 56898 9999999999999987 3
Q ss_pred CCCCceeeEcCCCCCEEEEecCCCeEEEEEcCcce
Q 024676 227 PCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~ 261 (264)
......+.|+| ++.+|++|+.|+.|++||+.++.
T Consensus 240 ~~~v~~~~~s~-~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 240 RADVVDMKWST-DGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp CSCEEEEEECT-TSCEEEEEETTCEEEEEESSCCS
T ss_pred CCcEEEEEECC-CCCEEEEEECCCEEEEEEccCCC
Confidence 34455677877 58999999999999999987653
No 105
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=6e-32 Score=223.63 Aligned_cols=206 Identities=20% Similarity=0.315 Sum_probs=164.9
Q ss_pred eEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCc--eEEeeeCCcCCEEEEEECCC--CcEEEEecCCCeE
Q 024676 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDAN--ALFSASGSADFTA 85 (264)
Q Consensus 10 ~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~--~~~~~~~H~~~V~~v~~~~~--~~~l~s~s~D~~v 85 (264)
..+.||..+|.+|+|+|. .++++|++|+.|++|++||.++++ .+..+.+|.+.|.+++|+|+ +.++++|+.|++|
T Consensus 51 ~~l~gH~~~V~~v~~~~~-~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i 129 (316)
T 3bg1_A 51 ADLRGHEGPVWQVAWAHP-MYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAI 129 (316)
T ss_dssp EEEECCSSCEEEEEECCG-GGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCE
T ss_pred EEEcCCCccEEEEEeCCC-CCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCE
Confidence 456799999999999852 147899999999999999998874 56678899999999999998 7899999999999
Q ss_pred EEEeCCCCcEE---EE-eecCCeEEEEEECCC-----------------CCEEEEeeCCCcEEEeeCCCCCC--CCeEec
Q 024676 86 KLWDALTGDEK---HS-FEHKHIVRACAFSED-----------------THLLLTGGFEKILRIFDLNRPDA--PPREVG 142 (264)
Q Consensus 86 ~iwd~~~~~~~---~~-~~~~~~v~~~~~~~~-----------------~~~l~s~~~d~~i~~~d~~~~~~--~~~~~~ 142 (264)
++||+..+... .. ..|...|..+.|+|+ +++|++|+.|++|++||++.... ....+.
T Consensus 130 ~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~ 209 (316)
T 3bg1_A 130 SLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLE 209 (316)
T ss_dssp EEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCB
T ss_pred EEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecc
Confidence 99999876322 11 136778999999997 47899999999999999864421 123345
Q ss_pred cCCCCeEEEEEecCC---CeEEEEeeCCCeEEEEECCCC---c-eeEE-ecCCCCEEEEEEcCCCcEEE-EeCCCcEEEE
Q 024676 143 NSSGSIRTVAWLHSD---QTILSSCTDSGGVRLWDARSG---K-IVQT-LETKSPVTSAEVSRDGRYIT-TADGSSVKFW 213 (264)
Q Consensus 143 ~~~~~i~~~~~~~~~---~~~~~~~~~d~~v~iwd~~~~---~-~~~~-~~~~~~v~~~~~s~~~~~l~-~~~~~~i~iw 213 (264)
.|...+.+++|+|++ ..++++++.|++|+|||+++. + .... ..+...|.+++|+|++++|+ ++.|+.|++|
T Consensus 210 ~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw 289 (316)
T 3bg1_A 210 AHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLW 289 (316)
T ss_dssp CCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEE
T ss_pred cCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEE
Confidence 678899999999875 367888999999999999863 1 1111 23456899999999998765 4678999999
Q ss_pred ECC
Q 024676 214 DAN 216 (264)
Q Consensus 214 d~~ 216 (264)
+..
T Consensus 290 ~~~ 292 (316)
T 3bg1_A 290 KES 292 (316)
T ss_dssp EEC
T ss_pred EEC
Confidence 975
No 106
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=9.5e-32 Score=228.96 Aligned_cols=227 Identities=15% Similarity=0.130 Sum_probs=164.1
Q ss_pred CCCeEEEEEeCCCCcEEEeCCCCce-----EEeeeCCcCCEEEEEECC--------CCcEEEEecCCCeEEEEeCCCCcE
Q 024676 29 PDGFFLVSASKDSSPMLRNGETGDW-----IGTFEGHKGAVWSCCLDA--------NALFSASGSADFTAKLWDALTGDE 95 (264)
Q Consensus 29 ~~g~~l~t~s~d~~v~i~~~~~~~~-----~~~~~~H~~~V~~v~~~~--------~~~~l~s~s~D~~v~iwd~~~~~~ 95 (264)
+++++|++|+.|++|++|+..+++. +..+.||++.|++++|+| |+.+|+|||.|++|||||+.++.+
T Consensus 99 ~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~ 178 (393)
T 4gq1_A 99 VYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGP 178 (393)
T ss_dssp EEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCce
Confidence 4678999999999999999988754 345789999999999987 789999999999999999987654
Q ss_pred -EEEeecCCeEEEEEECCCC-CEEEEeeCCCcEEEeeCCCCCCCCeE------------------------eccCCCCeE
Q 024676 96 -KHSFEHKHIVRACAFSEDT-HLLLTGGFEKILRIFDLNRPDAPPRE------------------------VGNSSGSIR 149 (264)
Q Consensus 96 -~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~~~d~~~~~~~~~~------------------------~~~~~~~i~ 149 (264)
...+.|..+|.+++|+|++ .+|++++.|++|++||+++++..... ...+...+.
T Consensus 179 ~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~ 258 (393)
T 4gq1_A 179 ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLA 258 (393)
T ss_dssp EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCS
T ss_pred eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccce
Confidence 4556789999999999987 47999999999999999876432211 123455678
Q ss_pred EEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEecCC-CCEE------------------EEEEcC--CCcEEEEe-CC
Q 024676 150 TVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK-SPVT------------------SAEVSR--DGRYITTA-DG 207 (264)
Q Consensus 150 ~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~-~~v~------------------~~~~s~--~~~~l~~~-~~ 207 (264)
++.|.+.++..+++++.|+++++||+++++....+..+ ..+. ...++| ++.+++++ .|
T Consensus 259 ~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~D 338 (393)
T 4gq1_A 259 NVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQH 338 (393)
T ss_dssp EEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTT
T ss_pred eeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCC
Confidence 88888767777888899999999999887654433211 1111 122333 34466655 47
Q ss_pred CcEEEEECCCceeeeEEec-CCCCceeeEcCCCCCEEEEecCCCeEEEEEc
Q 024676 208 SSVKFWDANHFGLVKGYNM-PCNTESASLEPKLGNIFIAGGEDMWVHVFDF 257 (264)
Q Consensus 208 ~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~ 257 (264)
+.|++||+.+++.+..+.. .....+++|+| +|++|+++++|+ +.+|++
T Consensus 339 g~V~lwd~~~~~~~~~~~~~~~~V~svafsp-dG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 339 GLIQLINTYEKDSNSIPIQLGMPIVDFCWHQ-DGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp TEEEEEETTCTTCCEEEEECSSCEEEEEECT-TSSEEEEEESSE-EEEEEE
T ss_pred CEEEEEECCCCcEEEEecCCCCcEEEEEEcC-CCCEEEEEeCCC-eEEEEE
Confidence 9999999998877665543 44556788888 599999999877 666654
No 107
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=4.5e-30 Score=220.30 Aligned_cols=240 Identities=13% Similarity=0.084 Sum_probs=204.7
Q ss_pred eccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEE-EEecCCCeEEEEeCC
Q 024676 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFS-ASGSADFTAKLWDAL 91 (264)
Q Consensus 13 ~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l-~s~s~D~~v~iwd~~ 91 (264)
.+|...|.+++|+| +++++++++.|+.+++||..+++.+..+..|...+.+++|+|++.++ ++++.|+.|++||+.
T Consensus 166 ~~~~~~v~~~~~~~---~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~ 242 (433)
T 3bws_A 166 KKKLGFVETISIPE---HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRK 242 (433)
T ss_dssp HTTCCEEEEEEEGG---GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cccCCceeEEEEcC---CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECC
Confidence 48999999999985 89999999999999999999999999999999999999999999877 567789999999999
Q ss_pred CCcEEEEeecCCeEEEEEECCCCCEEEEee--------CCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEE
Q 024676 92 TGDEKHSFEHKHIVRACAFSEDTHLLLTGG--------FEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (264)
Q Consensus 92 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--------~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 163 (264)
+++....+.....+..++|+|+++.+++++ .|+.|++||+++++... . ..+...+..++|.|++..++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~-~-~~~~~~~~~~~~~~~g~~l~~~ 320 (433)
T 3bws_A 243 TKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLID-T-IGPPGNKRHIVSGNTENKIYVS 320 (433)
T ss_dssp TTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEE-E-EEEEECEEEEEECSSTTEEEEE
T ss_pred CCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEe-e-ccCCCCcceEEECCCCCEEEEE
Confidence 998888888777899999999999999888 48899999998764322 2 2344578889999888888888
Q ss_pred eeCCCeEEEEECCCCceeEEecCCCCEEEEEEcCCCcEEEE-eC---------------CCcEEEEECCCceeeeEEecC
Q 024676 164 CTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITT-AD---------------GSSVKFWDANHFGLVKGYNMP 227 (264)
Q Consensus 164 ~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~---------------~~~i~iwd~~~~~~~~~~~~~ 227 (264)
++.++.|++||+++++.+..+.....+.+++++|+++++++ +. |+.|++||+.+++.+..+...
T Consensus 321 ~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~ 400 (433)
T 3bws_A 321 DMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG 400 (433)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS
T ss_pred ecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC
Confidence 88899999999999998888887788999999999986654 33 358999999999988888776
Q ss_pred CCCceeeEcCCCCCEEEEec-CCCeEEEEEcC
Q 024676 228 CNTESASLEPKLGNIFIAGG-EDMWVHVFDFH 258 (264)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~gs-~d~~v~vwd~~ 258 (264)
..+..+.+.|+ ++++++++ .|+.|++|+++
T Consensus 401 ~~~~~~~~s~d-g~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 401 NQPTGLDVSPD-NRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp SSEEEEEECTT-SCEEEEEETTTTEEEEEEET
T ss_pred CCCceEEEcCC-CCEEEEEECCCCeEEEEEec
Confidence 66677788875 77777665 59999999975
No 108
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=9.1e-31 Score=251.32 Aligned_cols=245 Identities=21% Similarity=0.374 Sum_probs=204.1
Q ss_pred ceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECC--CCcEEEEecCCCeEE
Q 024676 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDA--NALFSASGSADFTAK 86 (264)
Q Consensus 9 ~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~--~~~~l~s~s~D~~v~ 86 (264)
...+.+|..+|.+++|+| +|++|++|+.|+.|++||..+++.+..+.+|.+.|.+++|++ ++.++++|+.|++|+
T Consensus 650 ~~~~~~h~~~v~~~~~s~---~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~ 726 (1249)
T 3sfz_A 650 LLDIKAHEDEVLCCAFSS---DDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLK 726 (1249)
T ss_dssp EEEECCCSSCEEEEEECT---TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEE
T ss_pred EEEeccCCCCEEEEEEec---CCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEE
Confidence 345578999999999996 899999999999999999999999999999999999999999 556899999999999
Q ss_pred EEeCCCCcEEEEe-ecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEe------------ccCCCCeEEEEE
Q 024676 87 LWDALTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREV------------GNSSGSIRTVAW 153 (264)
Q Consensus 87 iwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~------------~~~~~~i~~~~~ 153 (264)
+||+.++.....+ .|...|.+++|+|+++++++++.|+.+++||+++++...... ......+.+++|
T Consensus 727 vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 806 (1249)
T 3sfz_A 727 LWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSW 806 (1249)
T ss_dssp EEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCB
T ss_pred EEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEE
Confidence 9999999877766 488899999999999999999999999999987653221111 011235677888
Q ss_pred ecCCCeEEEEeeCCCeEEEEECCCCceeEEec--CCCCEEEEEEcCCCcEEEEe-CCCcEEEEECCCceeeeEEecCCC-
Q 024676 154 LHSDQTILSSCTDSGGVRLWDARSGKIVQTLE--TKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCN- 229 (264)
Q Consensus 154 ~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~~~- 229 (264)
+|++..+++ ++ ++.+.+||+.++..+..+. +...+.+++++|++.+++++ .++.|++||+.++..+..+..+..
T Consensus 807 s~dg~~l~~-~~-~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~ 884 (1249)
T 3sfz_A 807 SADGDKIIV-AA-KNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSW 884 (1249)
T ss_dssp CTTSSEEEE-EE-TTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSC
T ss_pred CCCCCEEEE-Ec-CCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccc
Confidence 887765554 44 4899999999998877663 45679999999999987665 578999999999988888876544
Q ss_pred CceeeEcCCCCCEEEEecCCCeEEEEEcCc
Q 024676 230 TESASLEPKLGNIFIAGGEDMWVHVFDFHT 259 (264)
Q Consensus 230 ~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~ 259 (264)
...+.+.| ++.+|++++.|+.|++||+.+
T Consensus 885 v~~v~~sp-dg~~l~s~s~dg~v~vw~~~~ 913 (1249)
T 3sfz_A 885 VHGVMFSP-DGSSFLTASDDQTIRVWETKK 913 (1249)
T ss_dssp EEEEEECT-TSSEEEEEETTSCEEEEEHHH
T ss_pred eEEEEECC-CCCEEEEEeCCCeEEEEEccc
Confidence 45566776 589999999999999999764
No 109
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-31 Score=229.01 Aligned_cols=232 Identities=11% Similarity=0.102 Sum_probs=175.0
Q ss_pred cCCCeeeeEeccCCCCCeEEEEEeCCCCcE-----------------E----------EeCCCCceEEeee-CCcCCEEE
Q 024676 15 HSRPVVDLFYSPITPDGFFLVSASKDSSPM-----------------L----------RNGETGDWIGTFE-GHKGAVWS 66 (264)
Q Consensus 15 h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~-----------------i----------~~~~~~~~~~~~~-~H~~~V~~ 66 (264)
-...|.+|+|+| ||+++|++|.|++|+ + |+..+++....+. +|...|.+
T Consensus 14 ~~~~v~sv~~Sp---DG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~ 90 (588)
T 2j04_A 14 FEDWKNNLTWAR---DGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRV 90 (588)
T ss_dssp CSSSSCCEEECT---TSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEE
T ss_pred hhccEEEEEECC---CCCEEEEEcCCceeecccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEE
Confidence 456788999996 999999999999884 1 1122222112233 56888999
Q ss_pred EEECCCCcEEEEecCCCeEEEEeCCCCcEEEEeecCC-----eEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCC-----
Q 024676 67 CCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKH-----IVRACAFSEDTHLLLTGGFEKILRIFDLNRPDA----- 136 (264)
Q Consensus 67 v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~----- 136 (264)
++|+|+|+++|+++.||+|++||..+ .+..+.|.. .+.+++|+|++++|++|+.|++|++||+.++..
T Consensus 91 vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~ 168 (588)
T 2j04_A 91 CKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEF 168 (588)
T ss_dssp EEECSSSSCEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCC
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccc
Confidence 99999999999999999999999544 555555444 499999999999999999999999999987642
Q ss_pred -CCeEe----ccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCce---eEEec-C-CCCEEEEEEcCCCcEEEEeC
Q 024676 137 -PPREV----GNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI---VQTLE-T-KSPVTSAEVSRDGRYITTAD 206 (264)
Q Consensus 137 -~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~---~~~~~-~-~~~v~~~~~s~~~~~l~~~~ 206 (264)
....+ ..|...|.+++|+|++ +++++.|++|++||+.+++. .+.+. . ...|.+++|+ +..++++.
T Consensus 169 i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~ 243 (588)
T 2j04_A 169 YFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC 243 (588)
T ss_dssp EEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC
T ss_pred eeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe
Confidence 11232 4466799999999876 45566789999999998773 24552 3 3579999999 46777666
Q ss_pred CCcEEEEECCCcee-eeEEecCCCCceeeE--cCCCCCEEEEecCCCeEEEEEcC
Q 024676 207 GSSVKFWDANHFGL-VKGYNMPCNTESASL--EPKLGNIFIAGGEDMWVHVFDFH 258 (264)
Q Consensus 207 ~~~i~iwd~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~gs~d~~v~vwd~~ 258 (264)
+++|++||+.++.. ...+........+.+ .+ ++..++++++||+ ++|..+
T Consensus 244 ~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~-d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 244 PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEK-ESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCS-SCEEEEECSSCEE-EEEESS
T ss_pred CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCC-CCCEEEEEcCCCC-EEEeec
Confidence 79999999998876 333333334455666 55 5889999999999 999864
No 110
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.2e-29 Score=206.92 Aligned_cols=236 Identities=14% Similarity=0.198 Sum_probs=186.1
Q ss_pred eeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeee--CCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEE
Q 024676 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFE--GHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEK 96 (264)
Q Consensus 19 v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~--~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~ 96 (264)
.++|+|+| ++ +||+| .|++|++||..+++.++.+. +|...|.+++|+|++.+++||+.|++|++||+.+++.+
T Consensus 28 ~~~l~WS~---~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 28 LNLVDWSS---GN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 102 (318)
T ss_dssp CBCEEECT---TS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred ceEEEECC---CC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeE
Confidence 46799985 54 66665 59999999999999887665 67889999999999999999999999999999999887
Q ss_pred EEee-cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEEC
Q 024676 97 HSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDA 175 (264)
Q Consensus 97 ~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~ 175 (264)
..+. |...+..+ ++++.++++++.++.+++|+.............|...+..+.+.+.+. ++++++.|+.|++||+
T Consensus 103 ~~~~~h~~~~~~~--~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~ 179 (318)
T 4ggc_A 103 RNMTSHSARVGSL--SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGR-HLASGGNDNLVNVWPS 179 (318)
T ss_dssp EEEECCSSCEEEE--EEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEES
T ss_pred EEecCccceEEEe--ecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCC-EEEEEecCcceeEEEC
Confidence 7765 56666554 556779999999999999998776555555567788889888887655 5667788899999999
Q ss_pred CCCcee-----EEecCCCCEEEEEEcCCCc-EE--EEe-CCCcEEEEECCCceeeeEEecCCCCceeeEcCCCCCEEEE-
Q 024676 176 RSGKIV-----QTLETKSPVTSAEVSRDGR-YI--TTA-DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIA- 245 (264)
Q Consensus 176 ~~~~~~-----~~~~~~~~v~~~~~s~~~~-~l--~~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 245 (264)
++++.. ........+..+.++|++. ++ +++ .++.|++||.+..................+.+. +..+++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~ 258 (318)
T 4ggc_A 180 APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPH-YKELISG 258 (318)
T ss_dssp SCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETT-TTEEEEE
T ss_pred CCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeeccc-ccceEEE
Confidence 987632 2223456799999999864 33 233 368999999999888777776666677777776 444443
Q ss_pred -ecCCCeEEEEEcCcceee
Q 024676 246 -GGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 246 -gs~d~~v~vwd~~~g~~i 263 (264)
|+.|+.|++||+.+++.+
T Consensus 259 sg~~d~~i~iwd~~~~~~~ 277 (318)
T 4ggc_A 259 HGFAQNQLVIWKYPTMAKV 277 (318)
T ss_dssp ECTTTCCEEEEETTTCCEE
T ss_pred EEcCCCEEEEEECCCCcEE
Confidence 458999999999998865
No 111
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3e-30 Score=214.06 Aligned_cols=212 Identities=19% Similarity=0.299 Sum_probs=166.5
Q ss_pred CCCceEEeeeCCcCCEEEEEECCC-CcEEEEecCCCeEEEEeCCCCc-----EEEEe-ecCCeEEEEEECCCCCEEEEee
Q 024676 49 ETGDWIGTFEGHKGAVWSCCLDAN-ALFSASGSADFTAKLWDALTGD-----EKHSF-EHKHIVRACAFSEDTHLLLTGG 121 (264)
Q Consensus 49 ~~~~~~~~~~~H~~~V~~v~~~~~-~~~l~s~s~D~~v~iwd~~~~~-----~~~~~-~~~~~v~~~~~~~~~~~l~s~~ 121 (264)
++.++..+|+||++.|.+|+|+|+ +.+|+|||.|++|+|||+.+.+ +...+ .|..+|.+++|+|++++|++++
T Consensus 26 ~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~ 105 (340)
T 4aow_A 26 EQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGS 105 (340)
T ss_dssp CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEc
Confidence 444567789999999999999997 5899999999999999987654 23333 3788999999999999999999
Q ss_pred CCCcEEEeeCCCCCCCC------------------------------------------eEeccCCCCeEEEEEecCC-C
Q 024676 122 FEKILRIFDLNRPDAPP------------------------------------------REVGNSSGSIRTVAWLHSD-Q 158 (264)
Q Consensus 122 ~d~~i~~~d~~~~~~~~------------------------------------------~~~~~~~~~i~~~~~~~~~-~ 158 (264)
.|+.+++|+........ .....+...+..+++.+.. .
T Consensus 106 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 185 (340)
T 4aow_A 106 WDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 185 (340)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSS
T ss_pred ccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCC
Confidence 99999988875321100 0011234556777776554 3
Q ss_pred eEEEEeeCCCeEEEEECCCCceeEEec-CCCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEecCCCCceeeEc
Q 024676 159 TILSSCTDSGGVRLWDARSGKIVQTLE-TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCNTESASLE 236 (264)
Q Consensus 159 ~~~~~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 236 (264)
.++++++.|+.|++||+++++++..+. +..+|.+++|+|++++|++ +.|+.|++||+++.+.+..+..+.......+.
T Consensus 186 ~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~ 265 (340)
T 4aow_A 186 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFS 265 (340)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEEC
T ss_pred cEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecC
Confidence 467788888999999999999888775 4567999999999988765 56899999999999999888877666667776
Q ss_pred CCCCCEEEEecCCCeEEEEEcCccee
Q 024676 237 PKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (264)
Q Consensus 237 ~~~~~~~~~gs~d~~v~vwd~~~g~~ 262 (264)
++ + .+++++.|+.|++||+.++..
T Consensus 266 ~~-~-~~~~~~~d~~i~iwd~~~~~~ 289 (340)
T 4aow_A 266 PN-R-YWLCAATGPSIKIWDLEGKII 289 (340)
T ss_dssp SS-S-SEEEEEETTEEEEEETTTTEE
T ss_pred CC-C-ceeeccCCCEEEEEECCCCeE
Confidence 63 4 567778899999999987654
No 112
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.98 E-value=1.4e-30 Score=219.79 Aligned_cols=198 Identities=11% Similarity=0.142 Sum_probs=159.9
Q ss_pred ccCCCeeeeEeccCCCCCeEEEEE--eCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCC
Q 024676 14 GHSRPVVDLFYSPITPDGFFLVSA--SKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL 91 (264)
Q Consensus 14 ~h~~~v~~~~~~~~~~~g~~l~t~--s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~ 91 (264)
++...+.+++|+| ||++|+++ +.|++|++||..+++.+..+. |.+.|.+++|+||++++++++.|+ +++|+..
T Consensus 131 ~~~~~~~~v~fSp---Dg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~ 205 (365)
T 4h5i_A 131 NADDYTKLVYISR---EGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTV 205 (365)
T ss_dssp CTTCCEEEEEECT---TSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETT
T ss_pred CcccCEEEEEEcC---CCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecccee-EEEEEec
Confidence 4555688899996 99987654 478999999999999888886 778899999999999999998665 6666666
Q ss_pred CCcEEEEe---ecCCeEEEEEECCCCCEEEEeeCCC----cEEEeeCCCCCCC---CeEeccCCCCeEEEEEecCCCeEE
Q 024676 92 TGDEKHSF---EHKHIVRACAFSEDTHLLLTGGFEK----ILRIFDLNRPDAP---PREVGNSSGSIRTVAWLHSDQTIL 161 (264)
Q Consensus 92 ~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~d~----~i~~~d~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~ 161 (264)
++...... .|...|..++|+|+++++++++.|+ .++.|++...... ......+...+.+++|+|++. ++
T Consensus 206 ~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~-~l 284 (365)
T 4h5i_A 206 TGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGE-LA 284 (365)
T ss_dssp TCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSC-EE
T ss_pred cCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCC-ce
Confidence 66654432 3677899999999999999999887 5888887654322 123445778899999998654 67
Q ss_pred EEeeCCCeEEEEECCCCceeEEe-c-CCCCEEEEEEcCCCcEEEE-eCCCcEEEEECCC
Q 024676 162 SSCTDSGGVRLWDARSGKIVQTL-E-TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANH 217 (264)
Q Consensus 162 ~~~~~d~~v~iwd~~~~~~~~~~-~-~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~ 217 (264)
++++.|++|+|||+++++++..+ . +..+|++++|+|||++|++ +.|++|+|||+..
T Consensus 285 asgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 285 VLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred EEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 78888999999999999998876 4 4678999999999998876 5689999999954
No 113
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.98 E-value=9e-29 Score=209.49 Aligned_cols=229 Identities=11% Similarity=0.108 Sum_probs=191.8
Q ss_pred CeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEE-EEecCCCeEEEEeCCCCcEEEEeecCCeEEEEE
Q 024676 31 GFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFS-ASGSADFTAKLWDALTGDEKHSFEHKHIVRACA 109 (264)
Q Consensus 31 g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l-~s~s~D~~v~iwd~~~~~~~~~~~~~~~v~~~~ 109 (264)
+..+++++.|+.|++||..+++.+..+.+|.. +.+++|+|++.++ ++++.|++|++||..+++.+..+.+...+..++
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~ 80 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVA 80 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceE
Confidence 35789999999999999999999989988854 8999999999876 788899999999999999888888778999999
Q ss_pred ECCCCCEEEEe-eCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEecCCC
Q 024676 110 FSEDTHLLLTG-GFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKS 188 (264)
Q Consensus 110 ~~~~~~~l~s~-~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~ 188 (264)
|+|+++.++.+ +.++.|++||+.+++.... . .....+..++|++++..++++++.++.|++||+++++.+..+..+.
T Consensus 81 ~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~-~-~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 158 (391)
T 1l0q_A 81 VSPDGKQVYVTNMASSTLSVIDTTSNTVAGT-V-KTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR 158 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEE-E-ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS
T ss_pred ECCCCCEEEEEECCCCEEEEEECCCCeEEEE-E-eCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC
Confidence 99999987654 4679999999987654322 2 2345788999999888777888888999999999999988888777
Q ss_pred CEEEEEEcCCCcEE-EEe-CCCcEEEEECCCceeeeEEecCCCCceeeEcCCCCCEEEEec---CCCeEEEEEcCcceee
Q 024676 189 PVTSAEVSRDGRYI-TTA-DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGG---EDMWVHVFDFHTGEQI 263 (264)
Q Consensus 189 ~v~~~~~s~~~~~l-~~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs---~d~~v~vwd~~~g~~i 263 (264)
.+..++++|+++++ +++ .++.|++||+++++.+..+.....+..+.+.++ ++++++++ .|+.|++||+.+++.+
T Consensus 159 ~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~-g~~l~~~~~~~~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 159 SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPE-GTKAYVTNVDKYFNTVSMIDTGTNKIT 237 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTT-SSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCC-CCEEEEEecCcCCCcEEEEECCCCeEE
Confidence 88999999999766 444 468999999999988888876666667778774 77777766 6999999999988754
No 114
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.5e-29 Score=212.61 Aligned_cols=209 Identities=19% Similarity=0.242 Sum_probs=172.3
Q ss_pred cceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCc--eEEeeeCCcCCEEEEEECCC--CcEEEEecCCC
Q 024676 8 VPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDAN--ALFSASGSADF 83 (264)
Q Consensus 8 ~~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~--~~~~~~~H~~~V~~v~~~~~--~~~l~s~s~D~ 83 (264)
....+.+|..+|.+++|+|. .++++|++|+.|+.|++|+..+++ .+..+.+|...|.+++|+|+ +.++++++.|+
T Consensus 47 ~~~~~~~h~~~v~~~~~~~~-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~ 125 (379)
T 3jrp_A 47 LIDTLTGHEGPVWRVDWAHP-KFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG 125 (379)
T ss_dssp EEEEECCCSSCEEEEEECCG-GGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred eeeEecCCCCcEEEEEeCCC-CCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCC
Confidence 33456789999999999862 138899999999999999999987 67788899999999999999 89999999999
Q ss_pred eEEEEeCCCCc---EEEEeecCCeEEEEEECC-------------CCCEEEEeeCCCcEEEeeCCCCCCCC---eEeccC
Q 024676 84 TAKLWDALTGD---EKHSFEHKHIVRACAFSE-------------DTHLLLTGGFEKILRIFDLNRPDAPP---REVGNS 144 (264)
Q Consensus 84 ~v~iwd~~~~~---~~~~~~~~~~v~~~~~~~-------------~~~~l~s~~~d~~i~~~d~~~~~~~~---~~~~~~ 144 (264)
.|++||+.++. ......|...|.+++|+| +++++++++.|+.|++||++.+.... .....|
T Consensus 126 ~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h 205 (379)
T 3jrp_A 126 KVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 205 (379)
T ss_dssp EEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred cEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecc
Confidence 99999998873 223345888999999999 69999999999999999997654321 234457
Q ss_pred CCCeEEEEEecCC--CeEEEEeeCCCeEEEEECCCCce---eEEec---CCCCEEEEEEcCCCcEEEE-eCCCcEEEEEC
Q 024676 145 SGSIRTVAWLHSD--QTILSSCTDSGGVRLWDARSGKI---VQTLE---TKSPVTSAEVSRDGRYITT-ADGSSVKFWDA 215 (264)
Q Consensus 145 ~~~i~~~~~~~~~--~~~~~~~~~d~~v~iwd~~~~~~---~~~~~---~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~ 215 (264)
...+.+++|+|++ +.++++++.|+.|++||+++++. ..... +...+.+++|+|++++|++ +.|+.|++||+
T Consensus 206 ~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~ 285 (379)
T 3jrp_A 206 SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 285 (379)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEE
T ss_pred cCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeC
Confidence 8899999999874 67788888899999999998742 22222 4567999999999987654 67899999998
Q ss_pred CC
Q 024676 216 NH 217 (264)
Q Consensus 216 ~~ 217 (264)
+.
T Consensus 286 ~~ 287 (379)
T 3jrp_A 286 NL 287 (379)
T ss_dssp EE
T ss_pred CC
Confidence 74
No 115
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=3.9e-29 Score=212.01 Aligned_cols=242 Identities=16% Similarity=0.250 Sum_probs=165.5
Q ss_pred ccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCC---CcEEEEecCCCeEEEEeC
Q 024676 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDAN---ALFSASGSADFTAKLWDA 90 (264)
Q Consensus 14 ~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~---~~~l~s~s~D~~v~iwd~ 90 (264)
+|..+|.+++|+| .++++|++++.|+.+++|+..+++.+..+. |...+.++++.+. +.++++++.|+.|++||+
T Consensus 97 ~~~~~v~~~~~~~--~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 173 (408)
T 4a11_B 97 VHRYSVETVQWYP--HDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDL 173 (408)
T ss_dssp CCSSCEEEEEECT--TCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEES
T ss_pred cCCCcEEEEEEcc--CCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeC
Confidence 5999999999997 266799999999999999999998887776 7788999999884 459999999999999999
Q ss_pred CCCcEEEEee-cCCeEEEEEECCCCC-EEEEeeCCCcEEEeeCCCCCCCCeEe---------------ccCCCCeEEEEE
Q 024676 91 LTGDEKHSFE-HKHIVRACAFSEDTH-LLLTGGFEKILRIFDLNRPDAPPREV---------------GNSSGSIRTVAW 153 (264)
Q Consensus 91 ~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~s~~~d~~i~~~d~~~~~~~~~~~---------------~~~~~~i~~~~~ 153 (264)
.++.....+. |..+|.+++|+|+++ ++++++.|+.+++||++......... ..+...+.+++|
T Consensus 174 ~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 253 (408)
T 4a11_B 174 KSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCF 253 (408)
T ss_dssp SSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE
T ss_pred CCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEE
Confidence 9988777765 888999999999988 58899999999999998765333332 356788999999
Q ss_pred ecCCCeEEEEeeCCCeEEEEECCCCc-----------------------------------------------eeEEec-
Q 024676 154 LHSDQTILSSCTDSGGVRLWDARSGK-----------------------------------------------IVQTLE- 185 (264)
Q Consensus 154 ~~~~~~~~~~~~~d~~v~iwd~~~~~-----------------------------------------------~~~~~~- 185 (264)
+|++. ++++++.|+.|++||+++++ ++..+.
T Consensus 254 ~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~ 332 (408)
T 4a11_B 254 TSDGL-HLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKG 332 (408)
T ss_dssp CTTSS-EEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECC
T ss_pred cCCCC-EEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeecc
Confidence 98655 56667778999999987654 233333
Q ss_pred CCCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEecCCCCceeeEcCCCCCEEEEecCCCeEEEEEcCcce
Q 024676 186 TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 186 ~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~ 261 (264)
+..+|.+++|+|++++|++ +.|+.|++||+++++.+......... ..+.+.....+.+.+.|+.+++|+...-+
T Consensus 333 ~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~W~~~~~~ 407 (408)
T 4a11_B 333 HYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTTK--SQLNPAFEDAWSSSDEEGGTSAWSHPQFE 407 (408)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEEEECC--------------------------------------------
T ss_pred CCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEec--cccccccceeecccCccCceeecCCcccC
Confidence 3467999999999987765 56899999999998877655433222 22333345667788899999999865433
No 116
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=1.7e-28 Score=210.47 Aligned_cols=241 Identities=11% Similarity=0.094 Sum_probs=196.4
Q ss_pred CCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEE-----eeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCC
Q 024676 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIG-----TFEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL 91 (264)
Q Consensus 17 ~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~-----~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~ 91 (264)
..+.+++|+| ++.++++++.|+.+++||..+++.+. .+.+|.+.|.+++|++++.++++++.|+.|++||+.
T Consensus 123 ~~~~~~~~s~---~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~ 199 (433)
T 3bws_A 123 FQPKSVRFID---NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLK 199 (433)
T ss_dssp SCBCCCEESS---SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETT
T ss_pred CCceEEEEeC---CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECC
Confidence 3455899996 78899999999999999999998776 456899999999999999999999999999999999
Q ss_pred CCcEEEEee-cCCeEEEEEECCCCCEEEEe-eCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEee----
Q 024676 92 TGDEKHSFE-HKHIVRACAFSEDTHLLLTG-GFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT---- 165 (264)
Q Consensus 92 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~-~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---- 165 (264)
+++....+. |...+..++|+|+++.++++ +.|+.|++||+++++.. .. ......+..++|.|++..+++++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~-~~-~~~~~~~~~~~~~~~g~~l~~~~~~~~~ 277 (433)
T 3bws_A 200 TLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEI-RK-TDKIGLPRGLLLSKDGKELYIAQFSASN 277 (433)
T ss_dssp TCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEE-EE-CCCCSEEEEEEECTTSSEEEEEEEESCT
T ss_pred CceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEE-EE-ecCCCCceEEEEcCCCCEEEEEECCCCc
Confidence 988877775 67789999999999988654 47999999999866432 22 223456888999988776666553
Q ss_pred ---CCCeEEEEECCCCceeEEecCCCCEEEEEEcCCCcEE-EE-eCCCcEEEEECCCceeeeEEecCCCCceeeEcCCCC
Q 024676 166 ---DSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYI-TT-ADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLG 240 (264)
Q Consensus 166 ---~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~-~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (264)
.|+.|++||+++++.+..+.....+..++++|+++.+ ++ +.++.|++||+++++.+..+.....+..+.+.++ +
T Consensus 278 ~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~d-g 356 (433)
T 3bws_A 278 QESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPD-G 356 (433)
T ss_dssp TCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTT-S
T ss_pred cccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCC-C
Confidence 4689999999999887777655678899999999644 44 4578999999999988888877666777888875 7
Q ss_pred CEEEEecC---------------CCeEEEEEcCcceee
Q 024676 241 NIFIAGGE---------------DMWVHVFDFHTGEQI 263 (264)
Q Consensus 241 ~~~~~gs~---------------d~~v~vwd~~~g~~i 263 (264)
+++++++. |+.|++||+.+++.+
T Consensus 357 ~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~ 394 (433)
T 3bws_A 357 KYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVK 394 (433)
T ss_dssp SEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEE
T ss_pred CEEEEEecCCCccccccccccccceEEEEEECCCCcEE
Confidence 76776665 579999999988764
No 117
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=1e-29 Score=208.66 Aligned_cols=174 Identities=11% Similarity=0.011 Sum_probs=130.5
Q ss_pred CCCCcEEEeC-CCCceEEeeeCCcCCEEEEEECC---CCcEEEEecCCCeEEEEeCCCCcEEEEee-cC---CeEEEEEE
Q 024676 39 KDSSPMLRNG-ETGDWIGTFEGHKGAVWSCCLDA---NALFSASGSADFTAKLWDALTGDEKHSFE-HK---HIVRACAF 110 (264)
Q Consensus 39 ~d~~v~i~~~-~~~~~~~~~~~H~~~V~~v~~~~---~~~~l~s~s~D~~v~iwd~~~~~~~~~~~-~~---~~v~~~~~ 110 (264)
.|+.|++|++ .+|+.+..+.+|...+..++|++ ++.+++|||.|++|||||+.+++.+.++. |. ..+..++|
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vaf 234 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAY 234 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEE
T ss_pred CCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEE
Confidence 3888888888 44777777778888888888887 67889999999999999999999989886 32 35677889
Q ss_pred CCCCCEE------------EEeeCCCcEEEeeCCCCCCCCeEe----ccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEE
Q 024676 111 SEDTHLL------------LTGGFEKILRIFDLNRPDAPPREV----GNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWD 174 (264)
Q Consensus 111 ~~~~~~l------------~s~~~d~~i~~~d~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd 174 (264)
+|+++++ ++|+.|+++++||..++....... ..+.+......+. +.++++++.|++|+|||
T Consensus 235 SpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s---g~~lASgS~DgTIkIWD 311 (356)
T 2w18_A 235 SEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK---DHCAAAILTSGTIAIWD 311 (356)
T ss_dssp EETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE---TTEEEEEETTSCEEEEE
T ss_pred CCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC---CCEEEEEcCCCcEEEEE
Confidence 9999876 567889999999997664322111 1233333333322 34688888999999999
Q ss_pred CCCCceeEEecCC-CC-EEEEEEcCCCcEEEE-eCCCcEEEEEC
Q 024676 175 ARSGKIVQTLETK-SP-VTSAEVSRDGRYITT-ADGSSVKFWDA 215 (264)
Q Consensus 175 ~~~~~~~~~~~~~-~~-v~~~~~s~~~~~l~~-~~~~~i~iwd~ 215 (264)
+++++++.++..+ .. +.+++|+|||++|++ +.|++|+|||+
T Consensus 312 l~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 312 LLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 9999999999754 33 446899999998766 45899999995
No 118
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=2.8e-29 Score=207.76 Aligned_cols=216 Identities=17% Similarity=0.256 Sum_probs=173.9
Q ss_pred cceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCC---------ceEEeeeCCcCCEEEEEECCC--CcEE
Q 024676 8 VPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG---------DWIGTFEGHKGAVWSCCLDAN--ALFS 76 (264)
Q Consensus 8 ~~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~---------~~~~~~~~H~~~V~~v~~~~~--~~~l 76 (264)
....+.+|..+|.+|+|+|. .++++|++|+.|+.|++|+..++ +.+..+.+|.+.|.+++|+|+ +.++
T Consensus 49 ~~~~~~~~~~~v~~~~~~~~-~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 127 (351)
T 3f3f_A 49 LSDSWRAHDSSIVAIDWASP-EYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKL 127 (351)
T ss_dssp EEEEEECCSSCEEEEEECCG-GGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEE
T ss_pred ecceeccCCCcEEEEEEcCC-CCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEE
Confidence 34455789999999999962 15889999999999999999887 457788899999999999999 9999
Q ss_pred EEecCCCeEEEEeCCCCcEEEEe--------------ecCCeEEEEEECCC---CCEEEEeeCCCcEEEeeCCCCCCC-C
Q 024676 77 ASGSADFTAKLWDALTGDEKHSF--------------EHKHIVRACAFSED---THLLLTGGFEKILRIFDLNRPDAP-P 138 (264)
Q Consensus 77 ~s~s~D~~v~iwd~~~~~~~~~~--------------~~~~~v~~~~~~~~---~~~l~s~~~d~~i~~~d~~~~~~~-~ 138 (264)
++++.|+.|++||+.++.....+ .+...+.++.|+|+ +.++++++.|+.+.+|+...+... .
T Consensus 128 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 207 (351)
T 3f3f_A 128 ACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVA 207 (351)
T ss_dssp EEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEE
T ss_pred EEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeee
Confidence 99999999999999877643322 25567899999997 899999999999988877655432 2
Q ss_pred eEeccCCCCeEEEEEecCCC---eEEEEeeCCCeEEEEECCCC-------------------------------------
Q 024676 139 REVGNSSGSIRTVAWLHSDQ---TILSSCTDSGGVRLWDARSG------------------------------------- 178 (264)
Q Consensus 139 ~~~~~~~~~i~~~~~~~~~~---~~~~~~~~d~~v~iwd~~~~------------------------------------- 178 (264)
.....|...+.+++|+|++. .++++++.|+.|++||++++
T Consensus 208 ~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (351)
T 3f3f_A 208 AKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEK 287 (351)
T ss_dssp EECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC------------------------------------
T ss_pred eecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCccccccccccccccccee
Confidence 33445788999999998763 67888899999999999875
Q ss_pred ---------ceeEEec-CCCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEE
Q 024676 179 ---------KIVQTLE-TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGY 224 (264)
Q Consensus 179 ---------~~~~~~~-~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~ 224 (264)
+.+..+. +..+|.+++|+|++++|++ +.|+.|++||+.+.+.++.+
T Consensus 288 ~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 288 AELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp ---CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred eeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 3444444 4567999999999987655 66899999999876554433
No 119
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-29 Score=211.50 Aligned_cols=231 Identities=11% Similarity=0.035 Sum_probs=171.9
Q ss_pred CCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCC---------CCceEEeee-CCcCCEEEEEECC--CCcEEEEecCCC
Q 024676 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGE---------TGDWIGTFE-GHKGAVWSCCLDA--NALFSASGSADF 83 (264)
Q Consensus 16 ~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~---------~~~~~~~~~-~H~~~V~~v~~~~--~~~~l~s~s~D~ 83 (264)
..+|.++.|+| + +++++.|+++++|+.. +++.++.+. +|.++|.+++|+| ++.++++++.|+
T Consensus 76 ~~~v~~~~~~~---~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg 149 (343)
T 3lrv_A 76 TPNPRTGGEHP---A---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRG 149 (343)
T ss_dssp EECCCTTCCCC---S---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTC
T ss_pred cCCceeeeeCC---c---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCC
Confidence 35677777876 3 8999999999999665 555455554 7889999999999 999999999999
Q ss_pred eEEEEeCCCCcEEEEe--ecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEecc-CCCCeEEEEEecCCCeE
Q 024676 84 TAKLWDALTGDEKHSF--EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGN-SSGSIRTVAWLHSDQTI 160 (264)
Q Consensus 84 ~v~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~ 160 (264)
+|++||+.+++..... .+...+.+++|+|+++++++|+.|+.|++||+++++.....+.. |.+++.+++|+|++. +
T Consensus 150 ~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~-~ 228 (343)
T 3lrv_A 150 TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGY-W 228 (343)
T ss_dssp CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSS-E
T ss_pred cEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCC-E
Confidence 9999999999876655 34557999999999999999999999999999988765344444 889999999998665 4
Q ss_pred EEEeeCCCeEEEEECCCCceeEEecC----CCCE--EEEEEcCCCcEEEE-eC-CCcEEEEECCCceeeeEEecCCCCce
Q 024676 161 LSSCTDSGGVRLWDARSGKIVQTLET----KSPV--TSAEVSRDGRYITT-AD-GSSVKFWDANHFGLVKGYNMPCNTES 232 (264)
Q Consensus 161 ~~~~~~d~~v~iwd~~~~~~~~~~~~----~~~v--~~~~~s~~~~~l~~-~~-~~~i~iwd~~~~~~~~~~~~~~~~~~ 232 (264)
++++++ +.|++||+++++++..+.. ..++ .+++|+|+++++++ +. ++.+++|++.+....-.. .....
T Consensus 229 l~s~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~---~~~~~ 304 (343)
T 3lrv_A 229 MVVECD-QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK---DEESA 304 (343)
T ss_dssp EEEEES-SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE---EEEEE
T ss_pred EEEEeC-CeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe---cCcee
Confidence 555565 4999999999877544432 1223 36999999998876 34 789999998654321111 01112
Q ss_pred eeEcC--CCCCEEEEecCCCeEEEEEc
Q 024676 233 ASLEP--KLGNIFIAGGEDMWVHVFDF 257 (264)
Q Consensus 233 ~~~~~--~~~~~~~~gs~d~~v~vwd~ 257 (264)
..+.+ .....+++++.|+.++++-.
T Consensus 305 ~~~~~~~~~~~~l~~~~~d~~~~~~~~ 331 (343)
T 3lrv_A 305 LCLQSDTADFTDMDVVCGDGGIAAILK 331 (343)
T ss_dssp CCC----CCCCEEEEEEETTEEEEEEE
T ss_pred EecCccccccceeEEEecCCceEEEEe
Confidence 22222 13678888889999988853
No 120
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=9.5e-29 Score=212.73 Aligned_cols=210 Identities=19% Similarity=0.306 Sum_probs=174.7
Q ss_pred eecceEeeccCCCeeeeEeccCCCCCe-EEEEEeCCCCcEEEeCCCCce-------EEeeeCCcCCEEEEEECC-CCcEE
Q 024676 6 VAVPLVCHGHSRPVVDLFYSPITPDGF-FLVSASKDSSPMLRNGETGDW-------IGTFEGHKGAVWSCCLDA-NALFS 76 (264)
Q Consensus 6 ~~~~~~~~~h~~~v~~~~~~~~~~~g~-~l~t~s~d~~v~i~~~~~~~~-------~~~~~~H~~~V~~v~~~~-~~~~l 76 (264)
......+.+|..+|.+|.|+| ++. +|++|+.|+.|++|++.++.. ...+.+|.+.|.+++|+| ++.++
T Consensus 171 ~~~~~~~~~h~~~v~~l~~~~---~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 247 (430)
T 2xyi_A 171 CQPDLRLRGHQKEGYGLSWNP---NLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLF 247 (430)
T ss_dssp CCCSEEEECCSSCCCCEEECT---TSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEE
T ss_pred CCCcEEecCCCCCeEEEEeCC---CCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEE
Confidence 455566789999999999997 565 999999999999999987422 356778999999999999 67889
Q ss_pred EEecCCCeEEEEeCCCC---cEEEEe-ecCCeEEEEEECCCCC-EEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEE
Q 024676 77 ASGSADFTAKLWDALTG---DEKHSF-EHKHIVRACAFSEDTH-LLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTV 151 (264)
Q Consensus 77 ~s~s~D~~v~iwd~~~~---~~~~~~-~~~~~v~~~~~~~~~~-~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~ 151 (264)
++++.|+.|++||+.++ .....+ .|...|++++|+|+++ ++++|+.|+.|++||++........+..|.+.+.++
T Consensus 248 ~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i 327 (430)
T 2xyi_A 248 GSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQV 327 (430)
T ss_dssp EEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEE
T ss_pred EEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEE
Confidence 99999999999999876 344444 5888999999999887 688999999999999987655556666788999999
Q ss_pred EEecCCCeEEEEeeCCCeEEEEECCC--------------CceeEEecC-CCCEEEEEEcCCCc-EEE-EeCCCcEEEEE
Q 024676 152 AWLHSDQTILSSCTDSGGVRLWDARS--------------GKIVQTLET-KSPVTSAEVSRDGR-YIT-TADGSSVKFWD 214 (264)
Q Consensus 152 ~~~~~~~~~~~~~~~d~~v~iwd~~~--------------~~~~~~~~~-~~~v~~~~~s~~~~-~l~-~~~~~~i~iwd 214 (264)
+|+|.+..++++++.|+.|+|||+++ .+.+..+.. ...|.+++|+|++. +++ ++.|+.|++|+
T Consensus 328 ~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~ 407 (430)
T 2xyi_A 328 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQ 407 (430)
T ss_dssp EECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEE
T ss_pred EECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeE
Confidence 99998888888889999999999987 244455543 45799999999997 554 56689999999
Q ss_pred CCCc
Q 024676 215 ANHF 218 (264)
Q Consensus 215 ~~~~ 218 (264)
+...
T Consensus 408 ~~~~ 411 (430)
T 2xyi_A 408 MAEN 411 (430)
T ss_dssp ECHH
T ss_pred cccc
Confidence 8753
No 121
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=2.9e-30 Score=219.83 Aligned_cols=206 Identities=11% Similarity=0.000 Sum_probs=155.3
Q ss_pred eeccCCCeeeeEeccC-----CCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCc-EEEEecCCCeE
Q 024676 12 CHGHSRPVVDLFYSPI-----TPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANAL-FSASGSADFTA 85 (264)
Q Consensus 12 ~~~h~~~v~~~~~~~~-----~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~-~l~s~s~D~~v 85 (264)
+.||++.|++|+|+|. ..||++||+||.|++|++||+.++..+..+.+|..+|.+++|+|++. ++++|+.|++|
T Consensus 132 ~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v 211 (393)
T 4gq1_A 132 KSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNI 211 (393)
T ss_dssp TTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred cCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEE
Confidence 4699999999999983 34899999999999999999998887778888999999999999874 79999999999
Q ss_pred EEEeCCCCcEEEEe--------------------------ecCCeEEEEEEC-CCCCEEEEeeCCCcEEEeeCCCCCCCC
Q 024676 86 KLWDALTGDEKHSF--------------------------EHKHIVRACAFS-EDTHLLLTGGFEKILRIFDLNRPDAPP 138 (264)
Q Consensus 86 ~iwd~~~~~~~~~~--------------------------~~~~~v~~~~~~-~~~~~l~s~~~d~~i~~~d~~~~~~~~ 138 (264)
++||+.++...... .|...+..+.|. |+++.+++++.|+.+++||+..+....
T Consensus 212 ~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~ 291 (393)
T 4gq1_A 212 RIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYN 291 (393)
T ss_dssp EEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------
T ss_pred EEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCc
Confidence 99999877543221 144567777775 799999999999999999987543221
Q ss_pred eEeccCCCCe------------------EEEEEe-cCCCeEEEEeeCCCeEEEEECCCCceeEEe-cCCCCEEEEEEcCC
Q 024676 139 REVGNSSGSI------------------RTVAWL-HSDQTILSSCTDSGGVRLWDARSGKIVQTL-ETKSPVTSAEVSRD 198 (264)
Q Consensus 139 ~~~~~~~~~i------------------~~~~~~-~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~-~~~~~v~~~~~s~~ 198 (264)
.. ..+...+ ....+. +.++.++++++.|+.|++||.++++++... .+..+|.+++|+||
T Consensus 292 ~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspd 370 (393)
T 4gq1_A 292 EI-SDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQD 370 (393)
T ss_dssp -------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTT
T ss_pred eE-eeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCC
Confidence 11 1111111 112233 335567888888999999999999876554 56678999999999
Q ss_pred CcEEEEeCCCcEEEEECCCc
Q 024676 199 GRYITTADGSSVKFWDANHF 218 (264)
Q Consensus 199 ~~~l~~~~~~~i~iwd~~~~ 218 (264)
|++|+++.++.+.+|.+..+
T Consensus 371 G~~LA~as~~Gv~lvrL~gf 390 (393)
T 4gq1_A 371 GSHLAIATEGSVLLTRLMGF 390 (393)
T ss_dssp SSEEEEEESSEEEEEEEGGG
T ss_pred CCEEEEEeCCCeEEEEEeCc
Confidence 99999888788888886544
No 122
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.9e-30 Score=222.37 Aligned_cols=190 Identities=12% Similarity=0.065 Sum_probs=156.7
Q ss_pred ccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcC-----CEEEEEECCCCcEEEEecCCCeEEEE
Q 024676 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKG-----AVWSCCLDANALFSASGSADFTAKLW 88 (264)
Q Consensus 14 ~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~-----~V~~v~~~~~~~~l~s~s~D~~v~iw 88 (264)
+|...|.+|+|+| +|++||+++.||.|++|+... ++..+. |.. .|.+++|+||++++++|+.||+|+||
T Consensus 83 ~~~~~V~~vawSP---dG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIW 156 (588)
T 2j04_A 83 QPVCYPRVCKPSP---IDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFF 156 (588)
T ss_dssp SCSCCEEEEEECS---SSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEE
T ss_pred CCCCcEEEEEECC---CCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEE
Confidence 6788999999996 999999999999999999654 667777 766 49999999999999999999999999
Q ss_pred eCCCCc-------EEEEee-----cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCC--CeEe-ccCCCCeEEEEE
Q 024676 89 DALTGD-------EKHSFE-----HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAP--PREV-GNSSGSIRTVAW 153 (264)
Q Consensus 89 d~~~~~-------~~~~~~-----~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~--~~~~-~~~~~~i~~~~~ 153 (264)
|+.++. .+.++. |...|.+++|+|++ +++++.|+++++||+.++... ...+ ..|...|..++|
T Consensus 157 d~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaF 234 (588)
T 2j04_A 157 SIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKI 234 (588)
T ss_dssp ECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEE
T ss_pred ECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEE
Confidence 998875 245542 56789999999999 788999999999999776532 1233 357788999999
Q ss_pred ecCCCeEEEEeeCCCeEEEEECCCCce-eEEecCCCCEEEEEE--cCCCcEEEEeC-CCcEEEEECC
Q 024676 154 LHSDQTILSSCTDSGGVRLWDARSGKI-VQTLETKSPVTSAEV--SRDGRYITTAD-GSSVKFWDAN 216 (264)
Q Consensus 154 ~~~~~~~~~~~~~d~~v~iwd~~~~~~-~~~~~~~~~v~~~~~--s~~~~~l~~~~-~~~i~iwd~~ 216 (264)
+ +. .++++++ ++|++||+.+++. .....+...+..+.+ +|++..++.+. +++ ++|...
T Consensus 235 s--g~-~LASa~~-~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 235 V--DY-KVVLTCP-GYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp E--TT-EEEEECS-SEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred E--CC-EEEEEeC-CeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 8 44 5555554 9999999999887 445467778999999 99998887765 788 999875
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=4.7e-28 Score=198.77 Aligned_cols=234 Identities=10% Similarity=0.051 Sum_probs=158.9
Q ss_pred eeeeEeccCCCCC-eEEEEEeCCCCcEEEeCCCC---ceEEeeeCCcCC-------------------------EEEEEE
Q 024676 19 VVDLFYSPITPDG-FFLVSASKDSSPMLRNGETG---DWIGTFEGHKGA-------------------------VWSCCL 69 (264)
Q Consensus 19 v~~~~~~~~~~~g-~~l~t~s~d~~v~i~~~~~~---~~~~~~~~H~~~-------------------------V~~v~~ 69 (264)
+.++.|-. +++ ...+.......|++|+..++ +.++++.+|+.+ |+++++
T Consensus 42 ~~~~~~~~--~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~ 119 (356)
T 2w18_A 42 VSAMFWER--AGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFC 119 (356)
T ss_dssp EEEEEEC------CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC
T ss_pred Eeeeeecc--CCCCccEEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEE
Confidence 44555543 222 23344444668999999998 677888888764 455666
Q ss_pred CCC----CcEEEEecC--------------------CCeEEEEeCCC-CcEEEEe-ecCCeEEEEEECC---CCCEEEEe
Q 024676 70 DAN----ALFSASGSA--------------------DFTAKLWDALT-GDEKHSF-EHKHIVRACAFSE---DTHLLLTG 120 (264)
Q Consensus 70 ~~~----~~~l~s~s~--------------------D~~v~iwd~~~-~~~~~~~-~~~~~v~~~~~~~---~~~~l~s~ 120 (264)
+|+ +..+++++. |+.|++|++.. ++.+... .|...+..++|+| ++.+|+++
T Consensus 120 spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSg 199 (356)
T 2w18_A 120 SSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGT 199 (356)
T ss_dssp ------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEE
T ss_pred CCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEe
Confidence 667 777777553 78888888743 5554443 3666777788888 66899999
Q ss_pred eCCCcEEEeeCCCCCCCCeEeccC--CCCeEEEEEecCCCeE-----------EEEeeCCCeEEEEECCCCceeEEec--
Q 024676 121 GFEKILRIFDLNRPDAPPREVGNS--SGSIRTVAWLHSDQTI-----------LSSCTDSGGVRLWDARSGKIVQTLE-- 185 (264)
Q Consensus 121 ~~d~~i~~~d~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~-----------~~~~~~d~~v~iwd~~~~~~~~~~~-- 185 (264)
+.|++||+||+++++.......++ ...+.+++|+|++..+ +++++.|++|++||..+++++..+.
T Consensus 200 S~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~ 279 (356)
T 2w18_A 200 TIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYC 279 (356)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEEC
T ss_pred cCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEee
Confidence 999999999999887554443332 2356677888866544 3678889999999999999876541
Q ss_pred ---CC-CCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEecCCC-Cc-eeeEcCCCCCEEEEecCCCeEEEEEc
Q 024676 186 ---TK-SPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPCN-TE-SASLEPKLGNIFIAGGEDMWVHVFDF 257 (264)
Q Consensus 186 ---~~-~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~gs~d~~v~vwd~ 257 (264)
.+ ..+.+..+ ++.++++ +.|++|+|||++++++++++..+.. .. ..+|+| +|++|++||.|++|||||+
T Consensus 280 ~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSP-DG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 280 LPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSG-TDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECS-SSSEEEEECTTSCEEEEEE
T ss_pred ccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECC-CCCEEEEEECCCcEEEecC
Confidence 11 22332223 3556665 4689999999999999999875433 33 357887 5899999999999999996
No 124
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=5.7e-28 Score=201.92 Aligned_cols=214 Identities=14% Similarity=0.230 Sum_probs=165.1
Q ss_pred eCCCCceEEeeeCCcCCEEEEEECCC---CcEEEEecCCCeEEEEeCCC-CcEE-EEe-ecCCeEEEEEECCCCCEEEEe
Q 024676 47 NGETGDWIGTFEGHKGAVWSCCLDAN---ALFSASGSADFTAKLWDALT-GDEK-HSF-EHKHIVRACAFSEDTHLLLTG 120 (264)
Q Consensus 47 ~~~~~~~~~~~~~H~~~V~~v~~~~~---~~~l~s~s~D~~v~iwd~~~-~~~~-~~~-~~~~~v~~~~~~~~~~~l~s~ 120 (264)
+....+.+..+.+|.+.|.+++|+|+ +.++++|+.|+.|++||+.+ +... ..+ .|..+|.+++|+|++++|+++
T Consensus 25 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~ 104 (368)
T 3mmy_A 25 NHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTA 104 (368)
T ss_dssp SSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred CCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEE
Confidence 44455667788999999999999999 59999999999999999987 5443 333 488999999999999999999
Q ss_pred eCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEe-cCCCeEEEEeeCCCeEEEEECCCCceeEEecCCCC----------
Q 024676 121 GFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWL-HSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSP---------- 189 (264)
Q Consensus 121 ~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~---------- 189 (264)
+.|+.|++||+++++.. ....+...+.+++|. .+++.++++++.|+.|++||+++++.+..+..+..
T Consensus 105 ~~dg~v~iwd~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (368)
T 3mmy_A 105 SCDKTAKMWDLSSNQAI--QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPM 182 (368)
T ss_dssp ETTSEEEEEETTTTEEE--EEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTE
T ss_pred cCCCcEEEEEcCCCCce--eeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCe
Confidence 99999999999876532 344578899999993 23456777888889999999999887666554332
Q ss_pred --------------------------------EEEEEEcCCCc-----EEEEeCCCcEEEEECCCc---eeeeEEecCC-
Q 024676 190 --------------------------------VTSAEVSRDGR-----YITTADGSSVKFWDANHF---GLVKGYNMPC- 228 (264)
Q Consensus 190 --------------------------------v~~~~~s~~~~-----~l~~~~~~~i~iwd~~~~---~~~~~~~~~~- 228 (264)
...+.+.++.. +++++.++.|++||++.. ..+..+..+.
T Consensus 183 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~ 262 (368)
T 3mmy_A 183 AVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRS 262 (368)
T ss_dssp EEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEE
T ss_pred eEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeec
Confidence 23333333322 555677889999999876 3445554432
Q ss_pred ------------CCceeeEcCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 229 ------------NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 229 ------------~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
....+.++| ++.+|++|+.|+.|++||+.+++.+
T Consensus 263 ~~~~~~~~~~~~~v~~~~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 263 NGTNTSAPQDIYAVNGIAFHP-VHGTLATVGSDGRFSFWDKDARTKL 308 (368)
T ss_dssp C----CCCEEECCEEEEEECT-TTCCEEEEETTSCEEEEETTTTEEE
T ss_pred ccccccccccccceEEEEEec-CCCEEEEEccCCeEEEEECCCCcEE
Confidence 345667777 5889999999999999999988764
No 125
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=1.2e-27 Score=200.87 Aligned_cols=234 Identities=10% Similarity=0.136 Sum_probs=175.8
Q ss_pred cCCCeeeeEeccCCCCCeEE-EEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCC
Q 024676 15 HSRPVVDLFYSPITPDGFFL-VSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTG 93 (264)
Q Consensus 15 h~~~v~~~~~~~~~~~g~~l-~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~ 93 (264)
+...+..+.+.+ +++.+ ++++.|+++++||..+++.+..+. |...|.+++++++...+ + .|+.|++||+.++
T Consensus 57 ~~~~~~~~~~~~---~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~~~~--~-~~~~i~i~d~~~~ 129 (355)
T 3vu4_A 57 EMRHLSKVRMLH---RTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREFIVV--S-YGDVISVFKFGNP 129 (355)
T ss_dssp ECSCCCEEEECT---TSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSEEEE--E-ETTEEEEEESSTT
T ss_pred ecCCeEEEEEcC---CCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCEEEE--E-EcCEEEEEECCCC
Confidence 334577777775 44455 678889999999999999888887 66799999999875433 2 3789999999887
Q ss_pred -cEEEEeecCCeEEEEEECCCCCEEEE--eeCCCcEEEeeCCCCCC--------------C-CeEeccCCCCeEEEEEec
Q 024676 94 -DEKHSFEHKHIVRACAFSEDTHLLLT--GGFEKILRIFDLNRPDA--------------P-PREVGNSSGSIRTVAWLH 155 (264)
Q Consensus 94 -~~~~~~~~~~~v~~~~~~~~~~~l~s--~~~d~~i~~~d~~~~~~--------------~-~~~~~~~~~~i~~~~~~~ 155 (264)
+.+..+.. +...+++++ .+++. |+.|+.|++||++++.. + ...+..|.+.+.+++|+|
T Consensus 130 ~~~~~~~~~--~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~ 205 (355)
T 3vu4_A 130 WKRITDDIR--FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR 205 (355)
T ss_dssp CCBSSCCEE--EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECT
T ss_pred ceeeEEecc--CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC
Confidence 55555544 555566777 45555 67899999999986541 1 355667899999999998
Q ss_pred CCCeEEEEeeCCCe-EEEEECCCCceeEEec---CCCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeee--------
Q 024676 156 SDQTILSSCTDSGG-VRLWDARSGKIVQTLE---TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVK-------- 222 (264)
Q Consensus 156 ~~~~~~~~~~~d~~-v~iwd~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~-------- 222 (264)
++ .++++++.|++ |++||+++++++..+. +..+|.+++|+|++++|++ +.|++|++||++.....+
T Consensus 206 ~g-~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~ 284 (355)
T 3vu4_A 206 KS-DMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWI 284 (355)
T ss_dssp TS-SEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTE
T ss_pred CC-CEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCccccccccee
Confidence 55 56778889998 9999999999998886 5678999999999988765 568999999997543211
Q ss_pred ------------EEecCC----CCceeeEcCCCCCEEEEecCCCeEEEEEcCcce
Q 024676 223 ------------GYNMPC----NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 223 ------------~~~~~~----~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~ 261 (264)
.+..+. ....+++.+ ++.++++++.|+.+++|++..++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~-d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 285 NMKYFQSEWSLCNFKLSVDKHVRGCKIAWIS-ESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp ECCCCCCSSCSEEEECCCCTTCCCCEEEESS-SSEEEEEETTTTEEEEEEEEEET
T ss_pred eccccccccceeEEEeccCCCCCceEEEEeC-CCCEEEEEeCCCeEEEEEEEcCC
Confidence 111111 114456776 58899999999999999987654
No 126
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2e-28 Score=224.59 Aligned_cols=210 Identities=18% Similarity=0.232 Sum_probs=172.5
Q ss_pred ecceEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCc--eEEeeeCCcCCEEEEEECCC--CcEEEEecCC
Q 024676 7 AVPLVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDAN--ALFSASGSAD 82 (264)
Q Consensus 7 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~--~~~~~~~H~~~V~~v~~~~~--~~~l~s~s~D 82 (264)
.....+.+|.++|.++.|+|. .++++|++|+.||.|++|++.+++ .+..+.+|.+.|.+++|+|+ +.++++|+.|
T Consensus 44 ~~~~~l~~h~~~V~~l~~s~~-~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d 122 (753)
T 3jro_A 44 KLIDTLTGHEGPVWRVDWAHP-KFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD 122 (753)
T ss_dssp EEEEEECCCSSCEEEEEECCT-TSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred ccceeccCCcCceEEEEecCC-CCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCC
Confidence 334456799999999999862 138899999999999999999886 67788899999999999999 9999999999
Q ss_pred CeEEEEeCCCCc---EEEEeecCCeEEEEEECC-------------CCCEEEEeeCCCcEEEeeCCCCCCC---CeEecc
Q 024676 83 FTAKLWDALTGD---EKHSFEHKHIVRACAFSE-------------DTHLLLTGGFEKILRIFDLNRPDAP---PREVGN 143 (264)
Q Consensus 83 ~~v~iwd~~~~~---~~~~~~~~~~v~~~~~~~-------------~~~~l~s~~~d~~i~~~d~~~~~~~---~~~~~~ 143 (264)
++|++||+.++. ......|...|.+++|+| +++++++|+.|+.|++||++++... ......
T Consensus 123 g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~ 202 (753)
T 3jro_A 123 GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEG 202 (753)
T ss_dssp SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECC
T ss_pred CcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecC
Confidence 999999998773 333345888999999999 5899999999999999999766432 233456
Q ss_pred CCCCeEEEEEecCC--CeEEEEeeCCCeEEEEECCCCcee-----E-EecCCCCEEEEEEcCCCcEEEE-eCCCcEEEEE
Q 024676 144 SSGSIRTVAWLHSD--QTILSSCTDSGGVRLWDARSGKIV-----Q-TLETKSPVTSAEVSRDGRYITT-ADGSSVKFWD 214 (264)
Q Consensus 144 ~~~~i~~~~~~~~~--~~~~~~~~~d~~v~iwd~~~~~~~-----~-~~~~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd 214 (264)
|.+.+.+++|+|++ +.++++++.||.|++||+++++.. . ...+...+.+++|+|++.++++ +.|+.|++||
T Consensus 203 h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd 282 (753)
T 3jro_A 203 HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 282 (753)
T ss_dssp CSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCB
T ss_pred CCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEe
Confidence 78899999999874 677888888999999999987421 1 1124567999999999987765 5689999999
Q ss_pred CCC
Q 024676 215 ANH 217 (264)
Q Consensus 215 ~~~ 217 (264)
++.
T Consensus 283 ~~~ 285 (753)
T 3jro_A 283 ENL 285 (753)
T ss_dssp CCS
T ss_pred cCC
Confidence 874
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=1.2e-25 Score=192.58 Aligned_cols=247 Identities=13% Similarity=0.047 Sum_probs=185.5
Q ss_pred eEeeccCCCeeeeEeccC-----------CCCCeEEEEEeCC------CCcEEEeCCCCceEEeeeCCcCCEEEEEECCC
Q 024676 10 LVCHGHSRPVVDLFYSPI-----------TPDGFFLVSASKD------SSPMLRNGETGDWIGTFEGHKGAVWSCCLDAN 72 (264)
Q Consensus 10 ~~~~~h~~~v~~~~~~~~-----------~~~g~~l~t~s~d------~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~ 72 (264)
..+.+|...+..+++++. .+.+..++.++.+ +.+++||... ...+.+.+|.+.|.+++|+||
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spd 189 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPD 189 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTT
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCC
Confidence 345678888877776641 1125566666654 7899999974 446678889999999999999
Q ss_pred CcEEEEecCCC---eEEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEE-EeeCCCc--EEEeeCCCCCCCCeEeccCCC
Q 024676 73 ALFSASGSADF---TAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLL-TGGFEKI--LRIFDLNRPDAPPREVGNSSG 146 (264)
Q Consensus 73 ~~~l~s~s~D~---~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~d~~--i~~~d~~~~~~~~~~~~~~~~ 146 (264)
++++++++.|+ .|++||+.+++......+...+..++|+|+++.|+ +++.++. |++||+++++. ..+..+..
T Consensus 190 g~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~--~~l~~~~~ 267 (415)
T 2hqs_A 190 GSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI--RQVTDGRS 267 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE--EECCCCSS
T ss_pred CCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE--EeCcCCCC
Confidence 99999998885 99999999998776666788899999999999777 6666554 99999987643 44455667
Q ss_pred CeEEEEEecCCCeEEEEeeCCC--eEEEEECCCCceeEEecCCCCEEEEEEcCCCcEEEEeC-C---CcEEEEECCCcee
Q 024676 147 SIRTVAWLHSDQTILSSCTDSG--GVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTAD-G---SSVKFWDANHFGL 220 (264)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~d~--~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~---~~i~iwd~~~~~~ 220 (264)
.+..++|+|++..++.++.+++ .|.+||+++++..........+.+++|+|+|++|+.+. + ..|.+||+.+++.
T Consensus 268 ~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 268 NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 347 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred cccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence 8899999998877776665455 67788999887544333445688999999999876542 2 4799999998765
Q ss_pred eeEEecCCCCceeeEcCCCCCEEEEecCCC---eEEEEEcCcce
Q 024676 221 VKGYNMPCNTESASLEPKLGNIFIAGGEDM---WVHVFDFHTGE 261 (264)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~---~v~vwd~~~g~ 261 (264)
. .+..........+.| ++++|++++.|+ .|++||++.++
T Consensus 348 ~-~l~~~~~~~~~~~sp-dg~~l~~~s~~~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 348 Q-VLSSTFLDETPSLAP-NGTMVIYSSSQGMGSVLNLVSTDGRF 389 (415)
T ss_dssp E-ECCCSSSCEEEEECT-TSSEEEEEEEETTEEEEEEEETTSCC
T ss_pred E-EecCCCCcCCeEEcC-CCCEEEEEEcCCCccEEEEEECCCCc
Confidence 3 333333455677887 488888888877 89999987543
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=3e-25 Score=196.18 Aligned_cols=229 Identities=13% Similarity=0.168 Sum_probs=185.3
Q ss_pred CCCeEEEEEeCCCCcEEEeCCCCceEEeee-CCcCCEEEEEECCCCcEEEEecCCCeEEEEeC--CCCcEEEEeecCCeE
Q 024676 29 PDGFFLVSASKDSSPMLRNGETGDWIGTFE-GHKGAVWSCCLDANALFSASGSADFTAKLWDA--LTGDEKHSFEHKHIV 105 (264)
Q Consensus 29 ~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~-~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~--~~~~~~~~~~~~~~v 105 (264)
|++.++++++.|++|.+||..+++.+.++. +|. ++.++|+||++++++++.|++|++||+ .+++.+..+.+...+
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p 224 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEA 224 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEE
T ss_pred CCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCc
Confidence 488999999999999999999999999998 454 899999999999999999999999999 888888888887888
Q ss_pred EEEEECC----CCCEEEEeeC-CCcEEEeeCCCCCCCCeEec----------cCCCCeEEEEEecCCCeEEEEeeCCCeE
Q 024676 106 RACAFSE----DTHLLLTGGF-EKILRIFDLNRPDAPPREVG----------NSSGSIRTVAWLHSDQTILSSCTDSGGV 170 (264)
Q Consensus 106 ~~~~~~~----~~~~l~s~~~-d~~i~~~d~~~~~~~~~~~~----------~~~~~i~~~~~~~~~~~~~~~~~~d~~v 170 (264)
..++++| +++++++++. ++++.+||..+.+....... +....+..+.+++++..++++...+++|
T Consensus 225 ~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i 304 (543)
T 1nir_A 225 RSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKV 304 (543)
T ss_dssp EEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred ceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeE
Confidence 9999999 9999999884 89999999887654332221 1123678888999888888888899999
Q ss_pred EEEECCCCceeE--EecCCCCEEEEEEcCCCcEEE-EeC-CCcEEEEECCCceeeeEEecCCC--C-ceee-EcCCCCCE
Q 024676 171 RLWDARSGKIVQ--TLETKSPVTSAEVSRDGRYIT-TAD-GSSVKFWDANHFGLVKGYNMPCN--T-ESAS-LEPKLGNI 242 (264)
Q Consensus 171 ~iwd~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~-~~~-~~~i~iwd~~~~~~~~~~~~~~~--~-~~~~-~~~~~~~~ 242 (264)
.+||+.+.+.+. .+.....+..+.|+|+|+++. ++. +++|.+||..+++++..+..... + .... +.|+++.+
T Consensus 305 ~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~ 384 (543)
T 1nir_A 305 LLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPV 384 (543)
T ss_dssp EEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEE
T ss_pred EEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccE
Confidence 999999876544 445555677899999998654 443 68999999999999888875321 1 1222 35655788
Q ss_pred EEEec-CCCeEEEEEcCc
Q 024676 243 FIAGG-EDMWVHVFDFHT 259 (264)
Q Consensus 243 ~~~gs-~d~~v~vwd~~~ 259 (264)
+++++ .|++|.+||+++
T Consensus 385 ~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 385 WSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp EEEEBSSSSEEEEEECCT
T ss_pred EEeccCCCceEEEEEeCC
Confidence 88876 689999999987
No 129
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=4.4e-24 Score=176.68 Aligned_cols=243 Identities=12% Similarity=0.045 Sum_probs=182.0
Q ss_pred ccCCCeeeeEeccCCCCCeEEEEEeC-CCCcEEEeCCCCce-EEeeeCCcCCEEEEEECCCCcEEEEecCCC---eEEEE
Q 024676 14 GHSRPVVDLFYSPITPDGFFLVSASK-DSSPMLRNGETGDW-IGTFEGHKGAVWSCCLDANALFSASGSADF---TAKLW 88 (264)
Q Consensus 14 ~h~~~v~~~~~~~~~~~g~~l~t~s~-d~~v~i~~~~~~~~-~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~---~v~iw 88 (264)
.+..++ .++|+| +|++|++++. ++.+.+||..+++. ...+..+..+..+++|+|++.+++++..++ .|++|
T Consensus 38 ~~~~~~-~~~~s~---dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~ 113 (331)
T 3u4y_A 38 LGYDFV-DTAITS---DCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSY 113 (331)
T ss_dssp CCCCEE-EEEECS---SSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEE
T ss_pred ccCCcc-eEEEcC---CCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEE
Confidence 345555 899986 8886666655 88999999999987 777777777776699999999988655553 99999
Q ss_pred eCCCCcEEEEeecCCeEEEEEECCCCCEEEEe-eCCCc-EEEeeCCCCCCCC---eEeccCCCCeEEEEEecCCCeEEEE
Q 024676 89 DALTGDEKHSFEHKHIVRACAFSEDTHLLLTG-GFEKI-LRIFDLNRPDAPP---REVGNSSGSIRTVAWLHSDQTILSS 163 (264)
Q Consensus 89 d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~d~~-i~~~d~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~~~~~ 163 (264)
|+.+++.+..+........++|+|++++++++ ..++. +.+|+++...... ............++|+|++..++++
T Consensus 114 d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 193 (331)
T 3u4y_A 114 SFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVA 193 (331)
T ss_dssp ETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEE
T ss_pred ECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEE
Confidence 99999888888777777999999999866555 55588 9999987533221 1111234457889999988878888
Q ss_pred eeCCCeEEEEECCCCce---eEEecCCCCEEEEEEcCCCcEEEEe--CCCcEEEEECCCcee--eeEEecC----CCC--
Q 024676 164 CTDSGGVRLWDARSGKI---VQTLETKSPVTSAEVSRDGRYITTA--DGSSVKFWDANHFGL--VKGYNMP----CNT-- 230 (264)
Q Consensus 164 ~~~d~~v~iwd~~~~~~---~~~~~~~~~v~~~~~s~~~~~l~~~--~~~~i~iwd~~~~~~--~~~~~~~----~~~-- 230 (264)
+..++.|.+||+++++. +..+.....+..++++|+|+++..+ .++.|.+||+.+++. +..+... ...
T Consensus 194 ~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 273 (331)
T 3u4y_A 194 NLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLF 273 (331)
T ss_dssp ETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGT
T ss_pred eCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcc
Confidence 77789999999999988 7777766778889999999966443 356899999998876 4444322 111
Q ss_pred --ceeeEcCCCCCE-EEEecCCCeEEEEEcCcce
Q 024676 231 --ESASLEPKLGNI-FIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 231 --~~~~~~~~~~~~-~~~gs~d~~v~vwd~~~g~ 261 (264)
..+.+.|+ +++ +++++.++.|++||+.+.+
T Consensus 274 ~~~~~~~spd-g~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 274 GANQMALNKT-ETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp TCCCEEECTT-SSEEEEEETTTTEEEEEETTSCE
T ss_pred cccceEECCC-CCEEEEecCCCCcEEEEEecCCc
Confidence 22477775 555 4566667899999987543
No 130
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=2.2e-23 Score=172.66 Aligned_cols=244 Identities=14% Similarity=0.133 Sum_probs=175.3
Q ss_pred eccCCCeeeeEeccCCCCCeEEEEEeCC-CCcEEEeCC--CCce--EEeeeCCcCCEEEEEECCCCcEEEE-ecCCCeEE
Q 024676 13 HGHSRPVVDLFYSPITPDGFFLVSASKD-SSPMLRNGE--TGDW--IGTFEGHKGAVWSCCLDANALFSAS-GSADFTAK 86 (264)
Q Consensus 13 ~~h~~~v~~~~~~~~~~~g~~l~t~s~d-~~v~i~~~~--~~~~--~~~~~~H~~~V~~v~~~~~~~~l~s-~s~D~~v~ 86 (264)
..|...+.+++|+| +|++|++++.+ +.+.+|++. +++. +..+..+. .+..++|+|++.++++ +..++.|+
T Consensus 34 ~~~~~~~~~~~~sp---dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~ 109 (343)
T 1ri6_A 34 VDVPGQVQPMVVSP---DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVS 109 (343)
T ss_dssp EECSSCCCCEEECT---TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEE
T ss_pred EecCCCCceEEECC---CCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEE
Confidence 45778888999996 89988888887 899999987 5553 44555544 7788999999997755 45589999
Q ss_pred EEeCC---CCcEEEEeecCCeEEEEEECCCCCEEEEee-CCCcEEEeeCCC-CCCCC----eEeccCCCCeEEEEEecCC
Q 024676 87 LWDAL---TGDEKHSFEHKHIVRACAFSEDTHLLLTGG-FEKILRIFDLNR-PDAPP----REVGNSSGSIRTVAWLHSD 157 (264)
Q Consensus 87 iwd~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~i~~~d~~~-~~~~~----~~~~~~~~~i~~~~~~~~~ 157 (264)
+||+. .......+.....+..++|+|+++.+++++ .++.+++||+.+ ++... .........+..++|.|++
T Consensus 110 ~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg 189 (343)
T 1ri6_A 110 VTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNE 189 (343)
T ss_dssp EEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTS
T ss_pred EEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCC
Confidence 99994 333444455555688899999999888877 889999999976 43211 1112233467789999988
Q ss_pred CeEEEEeeCCCeEEEEECCC--Cce--eEEec---C----CCCEEEEEEcCCCcEEE-Ee-CCCcEEEEECC----Ccee
Q 024676 158 QTILSSCTDSGGVRLWDARS--GKI--VQTLE---T----KSPVTSAEVSRDGRYIT-TA-DGSSVKFWDAN----HFGL 220 (264)
Q Consensus 158 ~~~~~~~~~d~~v~iwd~~~--~~~--~~~~~---~----~~~v~~~~~s~~~~~l~-~~-~~~~i~iwd~~----~~~~ 220 (264)
..+++++..++.|++||++. ++. ..... . ...+..++|+|+++++. +. .++.|.+||+. +.+.
T Consensus 190 ~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~ 269 (343)
T 1ri6_A 190 QYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSK 269 (343)
T ss_dssp SEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEE
T ss_pred CEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEE
Confidence 87777776789999999953 433 22221 1 23467899999998664 44 46899999998 3455
Q ss_pred eeEEecCCCCceeeEcCCCCCEEEEec-CCCeEEEEE--cCcce
Q 024676 221 VKGYNMPCNTESASLEPKLGNIFIAGG-EDMWVHVFD--FHTGE 261 (264)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~gs-~d~~v~vwd--~~~g~ 261 (264)
+..+.....+..+.+.++ ++++++++ .|+.|++|+ ..+|+
T Consensus 270 ~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~~v~v~~~d~~~g~ 312 (343)
T 1ri6_A 270 EGFQPTETQPRGFNVDHS-GKYLIAAGQKSHHISVYEIVGEQGL 312 (343)
T ss_dssp EEEEECSSSCCCEEECTT-SSEEEEECTTTCEEEEEEEETTTTE
T ss_pred eeeecCCCccceEEECCC-CCEEEEecCCCCeEEEEEEcCCCce
Confidence 555655555667788885 66555555 789999994 44664
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.93 E-value=3.2e-23 Score=183.26 Aligned_cols=238 Identities=12% Similarity=0.086 Sum_probs=184.4
Q ss_pred eeeeEeccCCCCCeEEEEEeCCCCcEEEeC--CCCceEEeeeCCcCCEEEEEECC----CCcEEEEec-CCCeEEEEeCC
Q 024676 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNG--ETGDWIGTFEGHKGAVWSCCLDA----NALFSASGS-ADFTAKLWDAL 91 (264)
Q Consensus 19 v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~--~~~~~~~~~~~H~~~V~~v~~~~----~~~~l~s~s-~D~~v~iwd~~ 91 (264)
+..++|+| ||++|++++.|+.|++||. .+++.+.++.. ...++.++|+| |++++++++ .+++|.+||..
T Consensus 181 ~~~v~~sp---dg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~ 256 (543)
T 1nir_A 181 VHISRMSA---SGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGE 256 (543)
T ss_dssp EEEEEECT---TSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETT
T ss_pred cceEEECC---CCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecc
Confidence 77888986 9999999999999999999 88888888884 45679999999 999988877 58999999999
Q ss_pred CCcEEEEeec-----------CC-eEEEEEECCCCCEE-EEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCC
Q 024676 92 TGDEKHSFEH-----------KH-IVRACAFSEDTHLL-LTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQ 158 (264)
Q Consensus 92 ~~~~~~~~~~-----------~~-~v~~~~~~~~~~~l-~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 158 (264)
+++++..+.. .. .+..+.++|+++.+ ++...++.|.+||..+.+........+...+..+.|.|++.
T Consensus 257 t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~ 336 (543)
T 1nir_A 257 TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHR 336 (543)
T ss_dssp TCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSC
T ss_pred ccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCC
Confidence 9988877652 22 58889999976554 55667899999999765443211212344567788999888
Q ss_pred eEEEEeeCCCeEEEEECCCCceeEEecC----C-CCEEEEEEcCC-CcEEEEe--CCCcEEEEECCC-------ceeeeE
Q 024676 159 TILSSCTDSGGVRLWDARSGKIVQTLET----K-SPVTSAEVSRD-GRYITTA--DGSSVKFWDANH-------FGLVKG 223 (264)
Q Consensus 159 ~~~~~~~~d~~v~iwd~~~~~~~~~~~~----~-~~v~~~~~s~~-~~~l~~~--~~~~i~iwd~~~-------~~~~~~ 223 (264)
++++++..+++|.+||+++++++..+.. + .....+ ++|+ +.+++++ .+++|.+||+.+ ++++++
T Consensus 337 ~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~ 415 (543)
T 1nir_A 337 YFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAE 415 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEE
T ss_pred EEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEE
Confidence 8888887789999999999998877653 1 122233 5777 5666665 368999999988 889999
Q ss_pred EecCCC-CceeeEcCCCCCEEEEec-------CCCeEEEEEcCccee
Q 024676 224 YNMPCN-TESASLEPKLGNIFIAGG-------EDMWVHVFDFHTGEQ 262 (264)
Q Consensus 224 ~~~~~~-~~~~~~~~~~~~~~~~gs-------~d~~v~vwd~~~g~~ 262 (264)
+..+.. ...+.++| ++++|++++ .+++|.+||+.+++.
T Consensus 416 l~~~g~~~~~v~~~p-dg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 416 LQGQGGGSLFIKTHP-KSSHLYVDTTFNPDARISQSVAVFDLKNLDA 461 (543)
T ss_dssp EECSCSCCCCEECCT-TCCEEEECCTTCSSHHHHTCEEEEETTCTTS
T ss_pred EEcCCCCceEEEcCC-CCCcEEEecCCCCCcccCceEEEEECCCCCC
Confidence 987643 34566666 588888876 377999999998764
No 132
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=3.3e-23 Score=171.17 Aligned_cols=225 Identities=13% Similarity=0.122 Sum_probs=175.2
Q ss_pred eEEEEEeCCCCcEEEeCCCCceEEeeeC-CcC-CEEEEEECCCCcE-EEEecCCCeEEEEeCCCCcEEEEeecCC-----
Q 024676 32 FFLVSASKDSSPMLRNGETGDWIGTFEG-HKG-AVWSCCLDANALF-SASGSADFTAKLWDALTGDEKHSFEHKH----- 103 (264)
Q Consensus 32 ~~l~t~s~d~~v~i~~~~~~~~~~~~~~-H~~-~V~~v~~~~~~~~-l~s~s~D~~v~iwd~~~~~~~~~~~~~~----- 103 (264)
++|++++.++.+.+||..+++.+..+.. +.. .+..++|+|++.+ +++++.++.|.+||+.+++....+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 5789999999999999999998887763 322 4788999999965 4677788999999999998777665433
Q ss_pred -eEEEEEECCCCCEEEEee------------CCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeE
Q 024676 104 -IVRACAFSEDTHLLLTGG------------FEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGV 170 (264)
Q Consensus 104 -~v~~~~~~~~~~~l~s~~------------~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v 170 (264)
.+..++|+|+++.++++. .++.|.+||+.+++... ... ....+..++|+|++..++++ ++.|
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~-~~~-~~~~~~~~~~s~dg~~l~~~---~~~i 156 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRK-AFE-APRQITMLAWARDGSKLYGL---GRDL 156 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEE-EEE-CCSSCCCEEECTTSSCEEEE---SSSE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEE-EEe-CCCCcceeEECCCCCEEEEe---CCeE
Confidence 566789999999988886 57999999997654322 222 23456678888887766655 4789
Q ss_pred EEEECCCCceeEEecCC---------------------------------------------------------------
Q 024676 171 RLWDARSGKIVQTLETK--------------------------------------------------------------- 187 (264)
Q Consensus 171 ~iwd~~~~~~~~~~~~~--------------------------------------------------------------- 187 (264)
.+||+++++.+..+...
T Consensus 157 ~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~ 236 (337)
T 1pby_B 157 HVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREV 236 (337)
T ss_dssp EEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeec
Confidence 99999988765444221
Q ss_pred ----CCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeeeEEecCCCCceeeEcCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 188 ----SPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 188 ----~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
..+..++++|+++++..+ ++.|.+||+.+++.+..+.....+..+.+.++ ++++++++.|+.|++||+.+++.+
T Consensus 237 ~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 237 RIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEKNASIKRVPLPHSYYSVNVSTD-GSTVWLGGALGDLAAYDAETLEKK 314 (337)
T ss_dssp EECSSCEEEEEECTTSSEEEEE-ESEEEEEETTTTEEEEEEECSSCCCEEEECTT-SCEEEEESBSSEEEEEETTTCCEE
T ss_pred CCCCCceeeEEECCCCCEEEEe-CCeEEEEECCCCcCcceecCCCceeeEEECCC-CCEEEEEcCCCcEEEEECcCCcEE
Confidence 123458999999887766 68999999999998888887767777888885 777777888999999999988765
No 133
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.93 E-value=2.9e-23 Score=172.45 Aligned_cols=229 Identities=11% Similarity=0.023 Sum_probs=175.9
Q ss_pred CCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCc-CCEEEEEECCCCcEE-EEecCCCeEEEEeCCCCcEEEEeecCC---
Q 024676 29 PDGFFLVSASKDSSPMLRNGETGDWIGTFEGHK-GAVWSCCLDANALFS-ASGSADFTAKLWDALTGDEKHSFEHKH--- 103 (264)
Q Consensus 29 ~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~-~~V~~v~~~~~~~~l-~s~s~D~~v~iwd~~~~~~~~~~~~~~--- 103 (264)
++++++++++.++.|.+||..+++.++.+..+. ..+..++|+|+++++ ++++.++.|.+||+.+++....+....
T Consensus 9 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~ 88 (349)
T 1jmx_B 9 AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPG 88 (349)
T ss_dssp TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTT
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccc
Confidence 478899999999999999999999888887553 256789999999754 667789999999999988776665322
Q ss_pred ----eEEEEEECCCCCEEEEeeCC------------CcEEEeeCCCCCCCC-eEeccCCCCeEEEEEecCCCeEEEEeeC
Q 024676 104 ----IVRACAFSEDTHLLLTGGFE------------KILRIFDLNRPDAPP-REVGNSSGSIRTVAWLHSDQTILSSCTD 166 (264)
Q Consensus 104 ----~v~~~~~~~~~~~l~s~~~d------------~~i~~~d~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 166 (264)
.+..++|+|+++++++++.+ +.+.+||+.+++... .........+.+++|++++. +++. +
T Consensus 89 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~-~- 165 (349)
T 1jmx_B 89 EVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVA-G- 165 (349)
T ss_dssp EEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEE-S-
T ss_pred cccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEc-c-
Confidence 26788999999999998865 899999997643211 11122333577788888777 5553 3
Q ss_pred CCeEEEEECCCCceeEEecCCC----------------------------------------------------------
Q 024676 167 SGGVRLWDARSGKIVQTLETKS---------------------------------------------------------- 188 (264)
Q Consensus 167 d~~v~iwd~~~~~~~~~~~~~~---------------------------------------------------------- 188 (264)
+.|.+||+++++.+..+....
T Consensus 166 -~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 244 (349)
T 1jmx_B 166 -PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGK 244 (349)
T ss_dssp -SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCC
T ss_pred -CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCc
Confidence 349999999988776554221
Q ss_pred -----------CEEEEEEcC-CCcEEEEeCCCcEEEEECCCceeeeEEecCCCCceeeEcCCCCCEEEEecCCCeEEEEE
Q 024676 189 -----------PVTSAEVSR-DGRYITTADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFD 256 (264)
Q Consensus 189 -----------~v~~~~~s~-~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd 256 (264)
.+..++++| +++++..+ ++.|.+||+.+++.++.+.....+..+.++++ +++|++++.++.|++||
T Consensus 245 ~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~~~~~~~~v~v~d 322 (349)
T 1jmx_B 245 THTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKK-GDKLYLGGTFNDLAVFN 322 (349)
T ss_dssp EEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEECSSCCCEEEECSS-SSCEEEESBSSEEEEEE
T ss_pred EEecccccCCCcceeeEecCCCCCEEEEE-cCeEEEEECccCeEEEEEcCCCCccceEECCC-CCEEEEecCCCeEEEEe
Confidence 234567789 99887766 78999999999998888877666777888875 66666678899999999
Q ss_pred cCcceee
Q 024676 257 FHTGEQI 263 (264)
Q Consensus 257 ~~~g~~i 263 (264)
+++++.+
T Consensus 323 ~~~~~~~ 329 (349)
T 1jmx_B 323 PDTLEKV 329 (349)
T ss_dssp TTTTEEE
T ss_pred cccccee
Confidence 9998865
No 134
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=7.6e-23 Score=175.23 Aligned_cols=222 Identities=10% Similarity=0.075 Sum_probs=169.7
Q ss_pred ceEeeccCCCeeeeEeccCCCCCeEEEEEeCCC---CcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEE-EecCCCe
Q 024676 9 PLVCHGHSRPVVDLFYSPITPDGFFLVSASKDS---SPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSA-SGSADFT 84 (264)
Q Consensus 9 ~~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~---~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~-s~s~D~~ 84 (264)
+..+.+|...|.+++|+| ||++|++++.|+ .+++||+.+++.. .+..|.+.+.+++|+||+++++ +++.|+.
T Consensus 171 ~~~l~~~~~~v~~~~~Sp---dg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~ 246 (415)
T 2hqs_A 171 QFVVHRSPQPLMSPAWSP---DGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGS 246 (415)
T ss_dssp CEEEEEESSCEEEEEECT---TSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSS
T ss_pred CEEEeCCCCcceeeEEcC---CCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCC
Confidence 455678999999999996 999999999886 8999999998865 5777888999999999999877 7776654
Q ss_pred --EEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEEeeC-CC--cEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCe
Q 024676 85 --AKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGF-EK--ILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQT 159 (264)
Q Consensus 85 --v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~--~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 159 (264)
|++||+.+++......+...+..+.|+|+++.|++++. ++ .|.+||+.+++. ..+..+...+..++|+|++..
T Consensus 247 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~--~~l~~~~~~~~~~~~spdG~~ 324 (415)
T 2hqs_A 247 LNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP--QRITWEGSQNQDADVSSDGKF 324 (415)
T ss_dssp CEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC--EECCCSSSEEEEEEECTTSSE
T ss_pred ceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE--EEEecCCCcccCeEECCCCCE
Confidence 99999998877555567788999999999999888876 44 577778876542 333345567888999998887
Q ss_pred EEEEeeCC--CeEEEEECCCCceeEEecCCCCEEEEEEcCCCcEEEE-eCCC---cEEEEECCCceeeeEEecC-CCCce
Q 024676 160 ILSSCTDS--GGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITT-ADGS---SVKFWDANHFGLVKGYNMP-CNTES 232 (264)
Q Consensus 160 ~~~~~~~d--~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~~---~i~iwd~~~~~~~~~~~~~-~~~~~ 232 (264)
++.++.++ ..|.+||+++++.. .+..+..+.+++|+|||++|+. +.++ .|.+||+.... .+.+..+ .....
T Consensus 325 l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~-~~~l~~~~~~v~~ 402 (415)
T 2hqs_A 325 MVMVSSNGGQQHIAKQDLATGGVQ-VLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF-KARLPATDGQVKF 402 (415)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEE-ECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC-EEECCCSSSEEEE
T ss_pred EEEEECcCCceEEEEEECCCCCEE-EecCCCCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc-EEEeeCCCCCCcC
Confidence 77666553 48999999998874 3443347899999999987654 3333 79999987443 4444433 33455
Q ss_pred eeEcCC
Q 024676 233 ASLEPK 238 (264)
Q Consensus 233 ~~~~~~ 238 (264)
.+|.|.
T Consensus 403 ~~~~~~ 408 (415)
T 2hqs_A 403 PAWSPY 408 (415)
T ss_dssp EEECCC
T ss_pred Cccccc
Confidence 667664
No 135
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=3.1e-22 Score=165.55 Aligned_cols=229 Identities=9% Similarity=0.058 Sum_probs=174.5
Q ss_pred CCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEE-ecCCCeEEEEeCCCCcE-EEEeecCCeEEE
Q 024676 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSAS-GSADFTAKLWDALTGDE-KHSFEHKHIVRA 107 (264)
Q Consensus 30 ~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s-~s~D~~v~iwd~~~~~~-~~~~~~~~~v~~ 107 (264)
.+..+++++.++.|.+||..+++.+..+..+...+ .++|+|++++++. +..++.|.+||..++.. ...+........
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 87 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMA 87 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCC
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCcc
Confidence 45668899999999999999999888877666667 9999999986654 45589999999998876 555554444444
Q ss_pred -EEECCCCCEEEEeeCCC---cEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCe-EEEEECCCCcee-
Q 024676 108 -CAFSEDTHLLLTGGFEK---ILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGG-VRLWDARSGKIV- 181 (264)
Q Consensus 108 -~~~~~~~~~l~s~~~d~---~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~-v~iwd~~~~~~~- 181 (264)
++++|++++++++..++ .|.+||+++++... .. ........++|+|++..+++++..++. |.+|++.....+
T Consensus 88 ~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~-~~-~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~ 165 (331)
T 3u4y_A 88 DVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIS-TI-PIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLF 165 (331)
T ss_dssp CEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEE-EE-ECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEE
T ss_pred ceEECCCCCEEEEecCCCCcccEEEEECCCCCeEE-EE-ECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEe
Confidence 99999999999555553 89999998765432 22 234456889999988878888777778 999998764332
Q ss_pred ----EEecCCCCEEEEEEcCCCcEE-EEe-CCCcEEEEECCCcee---eeEEecCCCCceeeEcCCCCC-EEEEecCCCe
Q 024676 182 ----QTLETKSPVTSAEVSRDGRYI-TTA-DGSSVKFWDANHFGL---VKGYNMPCNTESASLEPKLGN-IFIAGGEDMW 251 (264)
Q Consensus 182 ----~~~~~~~~v~~~~~s~~~~~l-~~~-~~~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~gs~d~~ 251 (264)
..+.....+..++++|+|+++ ++. .++.|++||+.+++. +..+.....+..+.++|+ ++ ++++...++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spd-g~~l~v~~~~~~~ 244 (331)
T 3u4y_A 166 DTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRD-GSTVYVLTESTVD 244 (331)
T ss_dssp EEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTT-SSEEEEECSSEEE
T ss_pred ecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCC-CCEEEEEEcCCCE
Confidence 223344568899999999854 444 368999999998887 777777666777888885 66 5556667889
Q ss_pred EEEEEcCccee
Q 024676 252 VHVFDFHTGEQ 262 (264)
Q Consensus 252 v~vwd~~~g~~ 262 (264)
|.+||..+|+.
T Consensus 245 i~~~d~~~~~~ 255 (331)
T 3u4y_A 245 VFNFNQLSGTL 255 (331)
T ss_dssp EEEEETTTTEE
T ss_pred EEEEECCCCce
Confidence 99999998876
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=6.7e-23 Score=165.82 Aligned_cols=235 Identities=12% Similarity=0.088 Sum_probs=171.4
Q ss_pred eEeeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCC-CceEEeeeCC-cCCEEEEEECCCCcEEEEec--CCCeE
Q 024676 10 LVCHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET-GDWIGTFEGH-KGAVWSCCLDANALFSASGS--ADFTA 85 (264)
Q Consensus 10 ~~~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~-~~~~~~~~~H-~~~V~~v~~~~~~~~l~s~s--~D~~v 85 (264)
..+..|...|.+++|+| +|++|++++ ++.+.+|+..+ ++....+.+| ...|.+++|+|+++++++++ .++..
T Consensus 35 ~~~~~~~~~v~~~~~sp---dg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 110 (297)
T 2ojh_A 35 RVVWQTPELFEAPNWSP---DGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKS 110 (297)
T ss_dssp EEEEEESSCCEEEEECT---TSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSC
T ss_pred eeeccCCcceEeeEECC---CCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcc
Confidence 34567899999999996 899999887 78999999999 8877777666 47788999999999999888 44556
Q ss_pred EEEeC--CCCcEEEEeecCCeEEEEEECCCCCEEE-EeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEE
Q 024676 86 KLWDA--LTGDEKHSFEHKHIVRACAFSEDTHLLL-TGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILS 162 (264)
Q Consensus 86 ~iwd~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 162 (264)
+||.+ .++. ...+.....+..++|+|+++.++ ++..++.+++|+++...........+...+..++|+|++..+++
T Consensus 111 ~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 189 (297)
T 2ojh_A 111 AIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYF 189 (297)
T ss_dssp EEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEE
T ss_pred eEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEE
Confidence 66654 4444 34444445688899999999877 77889999999864332233444556678899999998887777
Q ss_pred EeeCCCeEEEEECC-CCceeEEecC-CCCEEEEEEcCCCcEEEEe-CC-----------CcEEEEECCCceeeeEEe---
Q 024676 163 SCTDSGGVRLWDAR-SGKIVQTLET-KSPVTSAEVSRDGRYITTA-DG-----------SSVKFWDANHFGLVKGYN--- 225 (264)
Q Consensus 163 ~~~~d~~v~iwd~~-~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~-~~-----------~~i~iwd~~~~~~~~~~~--- 225 (264)
++..++.++||+++ .+.....+.. ...+..+.|+|++++|+.+ .+ ..|.+||+.+++......
T Consensus 190 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 269 (297)
T 2ojh_A 190 NSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFG 269 (297)
T ss_dssp EECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEE
T ss_pred EecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCC
Confidence 76667899999886 4444555543 3468889999999876543 22 459999998875433332
Q ss_pred cCCCCceeeEcCCCCCEEEEecCCC
Q 024676 226 MPCNTESASLEPKLGNIFIAGGEDM 250 (264)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~gs~d~ 250 (264)
.......+.+.|+ ++.|++++.|.
T Consensus 270 ~~~~~~~~~~spd-g~~l~~~~~~~ 293 (297)
T 2ojh_A 270 GQGTMNSPNWSPD-GDEFAYVRYFP 293 (297)
T ss_dssp STTTSCSCCBCTT-SSEEEEEEECC
T ss_pred CCcccccceECCC-CCEEEEEEecc
Confidence 2334556677774 77777776653
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=1.5e-21 Score=162.48 Aligned_cols=242 Identities=12% Similarity=0.102 Sum_probs=183.6
Q ss_pred cCCCeeeeEeccCCCCCeEEEEEeC-------CCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcE-EEEecCCCeEE
Q 024676 15 HSRPVVDLFYSPITPDGFFLVSASK-------DSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALF-SASGSADFTAK 86 (264)
Q Consensus 15 h~~~v~~~~~~~~~~~g~~l~t~s~-------d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~-l~s~s~D~~v~ 86 (264)
....+..++|+| +|++|++++. ++.+.+||..+++.+..+... ..+..++|++++.+ +++...++.|.
T Consensus 39 ~~~~~~~~~~s~---dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~ 114 (353)
T 3vgz_A 39 VGKGAYEMAYSQ---QENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVT 114 (353)
T ss_dssp EESSEEEEEEET---TTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEE
T ss_pred hccCccceEECC---CCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEE
Confidence 345677899996 8888877774 567999999999988777643 34678899999985 46677789999
Q ss_pred EEeCCCCcEEEEeecCC----------eEEEEEECCCCCEEEEee--CCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEe
Q 024676 87 LWDALTGDEKHSFEHKH----------IVRACAFSEDTHLLLTGG--FEKILRIFDLNRPDAPPREVGNSSGSIRTVAWL 154 (264)
Q Consensus 87 iwd~~~~~~~~~~~~~~----------~v~~~~~~~~~~~l~s~~--~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~ 154 (264)
+||..+++.+..+.... .+..+.++|+++.++++. .++.|.+||+++++.. .........+..++++
T Consensus 115 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~s 193 (353)
T 3vgz_A 115 AIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLK-TAIQNTGKMSTGLALD 193 (353)
T ss_dssp EEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEE-EEECCCCTTCCCCEEE
T ss_pred EEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceE-EEecCCCCccceEEEC
Confidence 99999998877765422 268899999999888776 4788999999876543 2222233446778889
Q ss_pred cCCCeEEEEeeCCCeEEEEECCCCceeEEecC-----CCCEEEEEEcCCCcEEE-EeC-CCcEEEEECCCceeeeEEecC
Q 024676 155 HSDQTILSSCTDSGGVRLWDARSGKIVQTLET-----KSPVTSAEVSRDGRYIT-TAD-GSSVKFWDANHFGLVKGYNMP 227 (264)
Q Consensus 155 ~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~-~~~-~~~i~iwd~~~~~~~~~~~~~ 227 (264)
+++..++++ ..++.|.+||+++++.+..+.. ...+..++++|+++++. +.. ++.|.+||..+++.+..+..+
T Consensus 194 ~dg~~l~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~ 272 (353)
T 3vgz_A 194 SEGKRLYTT-NADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAP 272 (353)
T ss_dssp TTTTEEEEE-CTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECS
T ss_pred CCCCEEEEE-cCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC
Confidence 887766655 4578999999999998776643 33477899999998654 443 479999999999988888765
Q ss_pred CCCceeeEcCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 228 CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
.. ..+.+.++...++++...++.|.+||..+++.+
T Consensus 273 ~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~ 307 (353)
T 3vgz_A 273 ES-LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVV 307 (353)
T ss_dssp SC-CCEEEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred CC-ceEEECCCCCEEEEEECCCCeEEEEECCCCeEE
Confidence 43 457777754446677778999999999988764
No 138
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=1.1e-21 Score=163.66 Aligned_cols=244 Identities=11% Similarity=0.129 Sum_probs=168.8
Q ss_pred ccCCCeeeeEeccCCCCCeEEEEEeC---CCCcEEEeCCCCc--eEEeeeCCcCCEEEEEECCCCcEEEEec-CCCeEEE
Q 024676 14 GHSRPVVDLFYSPITPDGFFLVSASK---DSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDANALFSASGS-ADFTAKL 87 (264)
Q Consensus 14 ~h~~~v~~~~~~~~~~~g~~l~t~s~---d~~v~i~~~~~~~--~~~~~~~H~~~V~~v~~~~~~~~l~s~s-~D~~v~i 87 (264)
++...+..++|+| ||+ |++++. ++.+.+|++.+++ .+..+..|...+..++|+|+++++++++ .++++++
T Consensus 37 ~~~~~p~~~a~sp---dg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v 112 (347)
T 3hfq_A 37 AATQNPTYLALSA---KDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEV 112 (347)
T ss_dssp EECSCCCCEEECT---TCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEE
T ss_pred eccCCcceEEEcc---CCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEE
Confidence 4556667799986 888 555554 6899999997776 3455556777888999999999887766 7899999
Q ss_pred EeCCC-Cc--EEEEeecC----------CeEEEEEECCCCCEEEEeeCCCcEEEeeCC-CCCCCCe-E-eccCCCCeEEE
Q 024676 88 WDALT-GD--EKHSFEHK----------HIVRACAFSEDTHLLLTGGFEKILRIFDLN-RPDAPPR-E-VGNSSGSIRTV 151 (264)
Q Consensus 88 wd~~~-~~--~~~~~~~~----------~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~-~~~~~~~-~-~~~~~~~i~~~ 151 (264)
|++.. +. .+..+.+. ..+..++|+|+++++++...++.+++|++. .++.... . ..........+
T Consensus 113 ~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~ 192 (347)
T 3hfq_A 113 MKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHL 192 (347)
T ss_dssp EEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEE
T ss_pred EEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceE
Confidence 99853 33 22233221 237889999999966666678899999997 3332111 1 11223356778
Q ss_pred EEecCCCeEEEEeeCCCeEEEEECCC--Cce--eEEecC-------CCCEEEEEEcCCCcEE-EEe-CCCcEEEEECCC-
Q 024676 152 AWLHSDQTILSSCTDSGGVRLWDARS--GKI--VQTLET-------KSPVTSAEVSRDGRYI-TTA-DGSSVKFWDANH- 217 (264)
Q Consensus 152 ~~~~~~~~~~~~~~~d~~v~iwd~~~--~~~--~~~~~~-------~~~v~~~~~s~~~~~l-~~~-~~~~i~iwd~~~- 217 (264)
+|+|++..+++++..++.|.+|+++. ++. +..+.. ...+..++|+|||+++ ++. .++.|.+||+..
T Consensus 193 ~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~ 272 (347)
T 3hfq_A 193 VFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD 272 (347)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC
Confidence 99998887777777789999999874 543 222221 1348889999999876 443 468999999973
Q ss_pred --ceeeeEEec-CCCCceeeEcCCCCCEEEEec-CCCeEEEE--EcCccee
Q 024676 218 --FGLVKGYNM-PCNTESASLEPKLGNIFIAGG-EDMWVHVF--DFHTGEQ 262 (264)
Q Consensus 218 --~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gs-~d~~v~vw--d~~~g~~ 262 (264)
.+.+..+.. ...+..++++|+ +++|++++ .++.|.+| |..+|+.
T Consensus 273 g~~~~~~~~~~~~~~~~~~~~spd-g~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 273 GHLTLIQQISTEGDFPRDFDLDPT-EAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp GCEEEEEEEECSSSCCCEEEECTT-SSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred CcEEEeEEEecCCCCcCeEEECCC-CCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 344555554 334667888875 66666555 55999999 5556664
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=4.1e-22 Score=161.18 Aligned_cols=224 Identities=13% Similarity=0.053 Sum_probs=160.4
Q ss_pred EEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCC-CcEEEEeec--CCeEEEEEEC
Q 024676 35 VSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALT-GDEKHSFEH--KHIVRACAFS 111 (264)
Q Consensus 35 ~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~-~~~~~~~~~--~~~v~~~~~~ 111 (264)
..++.|+.+++||..+++.. .+..|.+.|.+++|+|++.++++++ ++.|++||+.+ ++....... ...+..++|+
T Consensus 16 ~~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 16 PGGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGIS 93 (297)
T ss_dssp --CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEEC
T ss_pred CCCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEEC
Confidence 34578899999999988765 4556889999999999999998876 78999999998 776655532 3567889999
Q ss_pred CCCCEEEEee--CCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEEC--CCCceeEEecCC
Q 024676 112 EDTHLLLTGG--FEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDA--RSGKIVQTLETK 187 (264)
Q Consensus 112 ~~~~~l~s~~--~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~--~~~~~~~~~~~~ 187 (264)
|+++++++++ .++..++|.++........+.. ...+..++|+|++..++.++..++.++||++ .+++........
T Consensus 94 pdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 172 (297)
T 2ojh_A 94 PDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGE 172 (297)
T ss_dssp TTSSEEEEEECTTTSSCEEEEEETTCCCCEECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSS
T ss_pred CCCCEEEEEEeCCCCcceEEEEECCCCceEEeec-CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCC
Confidence 9999999988 3345666654322222333332 3347888999988877767777899999985 445543333455
Q ss_pred CCEEEEEEcCCCcEEEE-e-CCCcEEEEECC-CceeeeEEecCC-CCceeeEcCCCCCEEEEecCC-----------CeE
Q 024676 188 SPVTSAEVSRDGRYITT-A-DGSSVKFWDAN-HFGLVKGYNMPC-NTESASLEPKLGNIFIAGGED-----------MWV 252 (264)
Q Consensus 188 ~~v~~~~~s~~~~~l~~-~-~~~~i~iwd~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~gs~d-----------~~v 252 (264)
..+.++.|+|++++++. + .++.+++|++. ....+..+..+. ......+.| ++++|++++.+ ..|
T Consensus 173 ~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~l 251 (297)
T 2ojh_A 173 GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSP-SGDKVVFVSYDADVFDHPRDLDVRV 251 (297)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECT-TSSEEEEEEEETTCCSCCSSEEEEE
T ss_pred CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECC-CCCEEEEEEcCCCCCcccccCceEE
Confidence 67999999999987654 4 36789999875 344444443322 233456777 58888877765 679
Q ss_pred EEEEcCccee
Q 024676 253 HVFDFHTGEQ 262 (264)
Q Consensus 253 ~vwd~~~g~~ 262 (264)
++||+.+++.
T Consensus 252 ~~~d~~~~~~ 261 (297)
T 2ojh_A 252 QLMDMDGGNV 261 (297)
T ss_dssp EEEETTSCSC
T ss_pred EEEecCCCCc
Confidence 9999987754
No 140
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.90 E-value=2.2e-22 Score=183.84 Aligned_cols=235 Identities=10% Similarity=-0.001 Sum_probs=175.5
Q ss_pred CCCeeeeEeccCCCCCeEEEEEeC-CC-----CcEEEeCCCCceEEeeeCCcC------------------------CEE
Q 024676 16 SRPVVDLFYSPITPDGFFLVSASK-DS-----SPMLRNGETGDWIGTFEGHKG------------------------AVW 65 (264)
Q Consensus 16 ~~~v~~~~~~~~~~~g~~l~t~s~-d~-----~v~i~~~~~~~~~~~~~~H~~------------------------~V~ 65 (264)
...+..++|+| ||++|++++. |+ .+++||..+++....+..|.. .|.
T Consensus 36 ~~~~~~~~~Sp---dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 112 (741)
T 2ecf_A 36 GPTLMKPKVAP---DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIV 112 (741)
T ss_dssp CCCCEEEEECT---TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESC
T ss_pred CCCCCCceEec---CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcc
Confidence 44688999996 9999999998 88 899999999987766665543 378
Q ss_pred EEEECCCCcEEEEecCCCeEEEEeCCCC---cEEEEeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEec
Q 024676 66 SCCLDANALFSASGSADFTAKLWDALTG---DEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG 142 (264)
Q Consensus 66 ~v~~~~~~~~l~s~s~D~~v~iwd~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~ 142 (264)
+++|+||++++++++. +.|++||+.++ .......+...+..++|+|+++.|+.++ ++.|++||+.+++..... .
T Consensus 113 ~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~-~ 189 (741)
T 2ecf_A 113 DYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLT-A 189 (741)
T ss_dssp CCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECC-C
T ss_pred eeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEec-c
Confidence 8999999999988876 89999999988 6555555677899999999999998887 468999999765422111 1
Q ss_pred cCCC----------------CeEEEEEecCCCeEEEEeeCCC--------------------------------eEEEEE
Q 024676 143 NSSG----------------SIRTVAWLHSDQTILSSCTDSG--------------------------------GVRLWD 174 (264)
Q Consensus 143 ~~~~----------------~i~~~~~~~~~~~~~~~~~~d~--------------------------------~v~iwd 174 (264)
.... .+..++|+|++..++.+..+.+ .|.+||
T Consensus 190 ~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 190 DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred CCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 1111 1366889998887766654422 789999
Q ss_pred CCC-CceeEEec---CCCCEEEEEEcCCCcEEEEeC------CCcEEEEECCCceeeeEEecCC-----CCceeeEcCCC
Q 024676 175 ARS-GKIVQTLE---TKSPVTSAEVSRDGRYITTAD------GSSVKFWDANHFGLVKGYNMPC-----NTESASLEPKL 239 (264)
Q Consensus 175 ~~~-~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~------~~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~ 239 (264)
+.+ ++...... +...+..++| |||++|+... +..|.+||+.+++....+..+. ......++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spd- 347 (741)
T 2ecf_A 270 PAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDD- 347 (741)
T ss_dssp SSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTT-
T ss_pred CCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCC-
Confidence 998 87654332 3346889999 9999876431 3479999999887765554332 2235677774
Q ss_pred CCEEEEecCCCeEEEEEcC
Q 024676 240 GNIFIAGGEDMWVHVFDFH 258 (264)
Q Consensus 240 ~~~~~~gs~d~~v~vwd~~ 258 (264)
|+++++++.|+.+++|.++
T Consensus 348 g~~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 348 GSILWSSERTGFQHLYRID 366 (741)
T ss_dssp SCEEEEECTTSSCEEEEEC
T ss_pred CeEEEEecCCCccEEEEEc
Confidence 7788999999988888764
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.90 E-value=7.1e-21 Score=158.38 Aligned_cols=227 Identities=13% Similarity=0.115 Sum_probs=176.1
Q ss_pred CCeeeeEeccCCCCCe-EEEEEeCCCCcEEEeCCCCceEEeeeCCcCC---------EEEEEECCCCcEEEEec--CCCe
Q 024676 17 RPVVDLFYSPITPDGF-FLVSASKDSSPMLRNGETGDWIGTFEGHKGA---------VWSCCLDANALFSASGS--ADFT 84 (264)
Q Consensus 17 ~~v~~~~~~~~~~~g~-~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~---------V~~v~~~~~~~~l~s~s--~D~~ 84 (264)
..+.++.|+| +|+ .+++...++.+.+||..+++.+..+..+... +..++|+|++.+++.++ .++.
T Consensus 89 ~~~~~~~~s~---dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 165 (353)
T 3vgz_A 89 LKPFGATINN---TTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESV 165 (353)
T ss_dssp SCCCSEEEET---TTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCE
T ss_pred CCcceEEECC---CCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCce
Confidence 3466788886 777 4455666899999999999988888765432 68899999998766554 5889
Q ss_pred EEEEeCCCCcEEEEee-cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEec---cCCCCeEEEEEecCCCeE
Q 024676 85 AKLWDALTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG---NSSGSIRTVAWLHSDQTI 160 (264)
Q Consensus 85 v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~ 160 (264)
|.+||..+++....+. +...+..+.|+|+++.+++++.++.+.+||+.+++....... .+......+++.|++..+
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 245 (353)
T 3vgz_A 166 IWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRA 245 (353)
T ss_dssp EEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEE
T ss_pred EEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEE
Confidence 9999999998888877 555678899999999999999999999999987654333222 134456778999988888
Q ss_pred EEEeeCCCeEEEEECCCCceeEEecCCCCEEEEEEcCCCcEE-EEe-CCCcEEEEECCCceeeeEEecCCCCceeeEcCC
Q 024676 161 LSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYI-TTA-DGSSVKFWDANHFGLVKGYNMPCNTESASLEPK 238 (264)
Q Consensus 161 ~~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 238 (264)
++++..++.|.+||+++++.+..+....+ ..++++|+++++ ++. .++.|.+||..+++.+..+.....+..+.+.++
T Consensus 246 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~d 324 (353)
T 3vgz_A 246 FITDSKAAEVLVVDTRNGNILAKVAAPES-LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSAD 324 (353)
T ss_dssp EEEESSSSEEEEEETTTCCEEEEEECSSC-CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTT
T ss_pred EEEeCCCCEEEEEECCCCcEEEEEEcCCC-ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCC
Confidence 88777779999999999998877765444 568999999854 444 468999999999999888887767777888875
Q ss_pred CCC-EEEEecC
Q 024676 239 LGN-IFIAGGE 248 (264)
Q Consensus 239 ~~~-~~~~gs~ 248 (264)
++ ++++...
T Consensus 325 -g~~l~v~~~~ 334 (353)
T 3vgz_A 325 -GKTLYVSVKQ 334 (353)
T ss_dssp -SCEEEEEEEC
T ss_pred -CCEEEEEEcc
Confidence 55 4444443
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.89 E-value=9e-22 Score=179.77 Aligned_cols=234 Identities=11% Similarity=0.077 Sum_probs=168.1
Q ss_pred CeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCc--eEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcE
Q 024676 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDE 95 (264)
Q Consensus 18 ~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~--~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~ 95 (264)
.|..++|+| ||++|++++. +.+++|++.+++ ....+..|...+..++|+||+++++.++ ++.|++||+.+++.
T Consensus 110 ~v~~~~~Sp---Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~ 184 (741)
T 2ecf_A 110 GIVDYQWSP---DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQ 184 (741)
T ss_dssp ESCCCEECT---TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEE
T ss_pred CcceeEECC---CCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCE
Confidence 378899986 9999999887 899999999883 3456777888999999999999998887 56899999988865
Q ss_pred EEEeec-CCe----------------EEEEEECCCCCEEEEeeCCC---------------------------------c
Q 024676 96 KHSFEH-KHI----------------VRACAFSEDTHLLLTGGFEK---------------------------------I 125 (264)
Q Consensus 96 ~~~~~~-~~~----------------v~~~~~~~~~~~l~s~~~d~---------------------------------~ 125 (264)
...... ... +..+.|+|+++.|++++.|+ .
T Consensus 185 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 264 (741)
T 2ecf_A 185 MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVK 264 (741)
T ss_dssp EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEE
T ss_pred EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeE
Confidence 544332 221 36789999999999987765 7
Q ss_pred EEEeeCCC-CCCCCeEec-cCCCCeEEEEEecCCCeEEEEee----CCCeEEEEECCCCceeEEecCCC-----CEEEEE
Q 024676 126 LRIFDLNR-PDAPPREVG-NSSGSIRTVAWLHSDQTILSSCT----DSGGVRLWDARSGKIVQTLETKS-----PVTSAE 194 (264)
Q Consensus 126 i~~~d~~~-~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~----~d~~v~iwd~~~~~~~~~~~~~~-----~v~~~~ 194 (264)
|.+||+.+ ++....... .+...+..++| |++..+++++. .+..|.+||++++++...+.... .+..+.
T Consensus 265 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 343 (741)
T 2ecf_A 265 LGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLR 343 (741)
T ss_dssp EEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCE
T ss_pred EEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceE
Confidence 88899877 653221111 35567889999 98887776654 34689999999998766554322 345789
Q ss_pred EcCCCcEEEEe-CCCcEEEEECC-CceeeeEEecCCC-Ccee-eEcCCCCC-EEEEecCCC--eEEEEEcCc
Q 024676 195 VSRDGRYITTA-DGSSVKFWDAN-HFGLVKGYNMPCN-TESA-SLEPKLGN-IFIAGGEDM--WVHVFDFHT 259 (264)
Q Consensus 195 ~s~~~~~l~~~-~~~~i~iwd~~-~~~~~~~~~~~~~-~~~~-~~~~~~~~-~~~~gs~d~--~v~vwd~~~ 259 (264)
|+|||++++++ .++.++||.+. .++ ...+..+.. .... .++++ ++ ++++++.|+ .+++|++..
T Consensus 344 ~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~d-g~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 344 FLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEK-AGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp ECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETT-TTEEEEEECSSCTTCBEEEEEET
T ss_pred ECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCC-CCEEEEEEeCCCCceEEEEEEEc
Confidence 99999977655 46777777665 233 444433322 2233 46775 55 445666666 899998764
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.89 E-value=9.8e-22 Score=178.98 Aligned_cols=237 Identities=11% Similarity=-0.025 Sum_probs=168.4
Q ss_pred CeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcC---CEEEEEECCCCcEEEEecCC---------CeE
Q 024676 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKG---AVWSCCLDANALFSASGSAD---------FTA 85 (264)
Q Consensus 18 ~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~---~V~~v~~~~~~~~l~s~s~D---------~~v 85 (264)
.+..++|+| ||+++++ +.|+++++||..+++....+.+|.. .|.+++|+||++++++++.+ +.+
T Consensus 18 ~~~~~~~sp---dg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i 93 (723)
T 1xfd_A 18 HDPEAKWIS---DTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYY 93 (723)
T ss_dssp CCCCCCBSS---SSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEE
T ss_pred cccccEEcC---CCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeE
Confidence 356788886 8997766 7899999999999988878887765 48999999999999988765 778
Q ss_pred EEEeCCCCcEEEEee---cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCC----------------
Q 024676 86 KLWDALTGDEKHSFE---HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSG---------------- 146 (264)
Q Consensus 86 ~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~---------------- 146 (264)
.+||+.+++...... +...+..++|+|+++.|+.++. +.|++||+.+++...... .+..
T Consensus 94 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~-~~~~~~~~~g~~~~v~~ee~ 171 (723)
T 1xfd_A 94 VLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVS-TGKEGVIYNGLSDWLYEEEI 171 (723)
T ss_dssp EEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEEC-CCBTTTEEEEECCHHHHHTT
T ss_pred EEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEec-CCCCCceECcccceeEEEEe
Confidence 899999887522222 2234788999999999998876 789999998765432221 1122
Q ss_pred --CeEEEEEecCCCeEEEEeeCC---------------------------------CeEEEEECCCCceeEEecC-----
Q 024676 147 --SIRTVAWLHSDQTILSSCTDS---------------------------------GGVRLWDARSGKIVQTLET----- 186 (264)
Q Consensus 147 --~i~~~~~~~~~~~~~~~~~~d---------------------------------~~v~iwd~~~~~~~~~~~~----- 186 (264)
.+..++|+|++..++.+..++ ..|++||+.+++....+..
T Consensus 172 ~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~ 251 (723)
T 1xfd_A 172 LKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPR 251 (723)
T ss_dssp SSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGG
T ss_pred ccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCC
Confidence 236799999887766654332 1799999999886555543
Q ss_pred --CCCEEEEEEcCCCcEEEEe-C----CCcEEEEECCCceeeeEEecC--CCC----ceeeEcCCCCCEEE-E-ecCCC-
Q 024676 187 --KSPVTSAEVSRDGRYITTA-D----GSSVKFWDANHFGLVKGYNMP--CNT----ESASLEPKLGNIFI-A-GGEDM- 250 (264)
Q Consensus 187 --~~~v~~~~~s~~~~~l~~~-~----~~~i~iwd~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~-~-gs~d~- 250 (264)
...+..+.|||||++++.. . +..|++||+.+++....+... ... ....|+|+ |+.|+ . +..|+
T Consensus 252 ~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spd-g~~l~~~~~~~~~~ 330 (723)
T 1xfd_A 252 MREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKD-GRKFFFIRAIPQGG 330 (723)
T ss_dssp GSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTT-SCSEEEEEEECCSS
T ss_pred CccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCC-CCeEEEEEecccCC
Confidence 3458899999999987543 2 247999999988766554332 111 25678875 55444 3 55677
Q ss_pred -----eEEEEE-cCcce
Q 024676 251 -----WVHVFD-FHTGE 261 (264)
Q Consensus 251 -----~v~vwd-~~~g~ 261 (264)
.|++|| ..+++
T Consensus 331 ~~~~~~l~~~d~~~~~~ 347 (723)
T 1xfd_A 331 RGKFYHITVSSSQPNSS 347 (723)
T ss_dssp SSCEEEEEEECSSCCSS
T ss_pred CcceeEEEEEeccCCCC
Confidence 566677 34443
No 144
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=1.5e-21 Score=168.15 Aligned_cols=197 Identities=9% Similarity=-0.009 Sum_probs=144.3
Q ss_pred cCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCC--------C--ceEEe-----eeCCcCCEEEEEECCCCcEEE--
Q 024676 15 HSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET--------G--DWIGT-----FEGHKGAVWSCCLDANALFSA-- 77 (264)
Q Consensus 15 h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~--------~--~~~~~-----~~~H~~~V~~v~~~~~~~~l~-- 77 (264)
....++.|++++ ++.+|++++.|+ +++|+... . ..+.. .-.|.+.|.+++|++++.+++
T Consensus 35 ~~~~~n~lavs~---~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~ 110 (434)
T 2oit_A 35 PKERSSLLAVSN---KYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSAC 110 (434)
T ss_dssp CCSCCBCEEEET---TTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEE
T ss_pred CCCCccEEEEec---CCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEE
Confidence 344578888886 677889999888 78875321 0 01111 123567899999999999998
Q ss_pred --EecCCCeEEEEeCCCC--------cEE---EEe-ecCCeEEEEEECCC-CCEEEEeeCCCcEEEeeCCCCCCCCeEec
Q 024676 78 --SGSADFTAKLWDALTG--------DEK---HSF-EHKHIVRACAFSED-THLLLTGGFEKILRIFDLNRPDAPPREVG 142 (264)
Q Consensus 78 --s~s~D~~v~iwd~~~~--------~~~---~~~-~~~~~v~~~~~~~~-~~~l~s~~~d~~i~~~d~~~~~~~~~~~~ 142 (264)
+|+.|++|+|||+.++ +.+ ..+ .|...|.+++|+|+ +++|++++.|+++++||++++... ....
T Consensus 111 ~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~-~~~~ 189 (434)
T 2oit_A 111 MMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKV-CATL 189 (434)
T ss_dssp EEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEE-EEEE
T ss_pred EeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcce-eecc
Confidence 8999999999998654 221 222 27889999999997 889999999999999999876332 2233
Q ss_pred cCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEecCC--------CCEEEEEEcCCCcEEEEe--CCC----
Q 024676 143 NSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK--------SPVTSAEVSRDGRYITTA--DGS---- 208 (264)
Q Consensus 143 ~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~--------~~v~~~~~s~~~~~l~~~--~~~---- 208 (264)
.|...+.+++|+|++. ++++++.|+.|++||.+ ++....+..+ ..+.++.|++++.++++. .++
T Consensus 190 ~~~~~v~~v~wspdg~-~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~ 267 (434)
T 2oit_A 190 PSTVAVTSVCWSPKGK-QLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLET 267 (434)
T ss_dssp CGGGCEEEEEECTTSS-CEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSS
T ss_pred CCCCceeEEEEcCCCC-EEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCC
Confidence 4677899999998755 56667788999999999 5554444321 268899999999887542 222
Q ss_pred --cEEEEECCCc
Q 024676 209 --SVKFWDANHF 218 (264)
Q Consensus 209 --~i~iwd~~~~ 218 (264)
.+++|++++.
T Consensus 268 ~~~v~i~~l~~~ 279 (434)
T 2oit_A 268 SPDVVMALLPKK 279 (434)
T ss_dssp CCEEEEEECCCT
T ss_pred CCceEEEEeccC
Confidence 3899999864
No 145
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.88 E-value=7.7e-19 Score=147.12 Aligned_cols=242 Identities=13% Similarity=0.108 Sum_probs=163.7
Q ss_pred cCCCeeeeEeccCCCCCeEEEEEeCC----CCcEEEeCCC--Cce--EEeeeCCcCCEEEEEECCCCcEEEE-ecCCCeE
Q 024676 15 HSRPVVDLFYSPITPDGFFLVSASKD----SSPMLRNGET--GDW--IGTFEGHKGAVWSCCLDANALFSAS-GSADFTA 85 (264)
Q Consensus 15 h~~~v~~~~~~~~~~~g~~l~t~s~d----~~v~i~~~~~--~~~--~~~~~~H~~~V~~v~~~~~~~~l~s-~s~D~~v 85 (264)
|......++|+| ||++|++++.+ +.+.+|++.. +++ +..+..+......+++ ++.++++ ...++++
T Consensus 48 ~~~~p~~l~~sp---dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v 122 (361)
T 3scy_A 48 EVANPSYLIPSA---DGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSI 122 (361)
T ss_dssp ECSCCCSEEECT---TSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEE
T ss_pred cCCCCceEEECC---CCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEE
Confidence 566677788985 99999999886 7899997654 543 3444545566677888 6666554 4578999
Q ss_pred EEEeCCCCcEEE----Eeec-----------CCeEEEEEECCCCCEEEEee-CCCcEEEeeCCCCCC----C-C------
Q 024676 86 KLWDALTGDEKH----SFEH-----------KHIVRACAFSEDTHLLLTGG-FEKILRIFDLNRPDA----P-P------ 138 (264)
Q Consensus 86 ~iwd~~~~~~~~----~~~~-----------~~~v~~~~~~~~~~~l~s~~-~d~~i~~~d~~~~~~----~-~------ 138 (264)
.+|++.....+. ...+ ...+..++|+|++++++++. .++.+++|+++.... . .
T Consensus 123 ~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~ 202 (361)
T 3scy_A 123 TVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTP 202 (361)
T ss_dssp EEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEE
T ss_pred EEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccc
Confidence 999987543221 1111 12357899999999776655 478999999875432 1 1
Q ss_pred -eEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCce--eEEecC----CCCEEEEEEcCCCcEEE-EeC--CC
Q 024676 139 -REVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI--VQTLET----KSPVTSAEVSRDGRYIT-TAD--GS 208 (264)
Q Consensus 139 -~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~--~~~~~~----~~~v~~~~~s~~~~~l~-~~~--~~ 208 (264)
............++|+|++..+++++..++.|.+||+++++. +..+.. ......++|+|||++|. +.. ++
T Consensus 203 ~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~ 282 (361)
T 3scy_A 203 EAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKAD 282 (361)
T ss_dssp EEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSC
T ss_pred cceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCC
Confidence 112233445778999998877777766679999999997754 222221 23467999999999764 443 37
Q ss_pred cEEEEECC--Cce--eeeEEecCCCCceeeEcCCCCCEEEEec-CCCeEEEEE--cCccee
Q 024676 209 SVKFWDAN--HFG--LVKGYNMPCNTESASLEPKLGNIFIAGG-EDMWVHVFD--FHTGEQ 262 (264)
Q Consensus 209 ~i~iwd~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~gs-~d~~v~vwd--~~~g~~ 262 (264)
.|.+|++. +++ .+..+.....+..++++|+ +++|++++ .++.|.+|+ ..+|+.
T Consensus 283 ~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spd-g~~l~~~~~~~~~v~v~~~d~~~g~~ 342 (361)
T 3scy_A 283 GVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPN-GKYLLVACRDTNVIQIFERDQATGLL 342 (361)
T ss_dssp EEEEEEECTTTCCEEEEEEEECSSCCCEEEECTT-SCEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EEEEEEEcCCCCcEEEeeEecCCCCCceEEECCC-CCEEEEEECCCCCEEEEEEECCCCcE
Confidence 89999985 333 4555544445667788885 66666555 789999964 446654
No 146
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=4.9e-21 Score=164.90 Aligned_cols=162 Identities=13% Similarity=0.035 Sum_probs=127.2
Q ss_pred eccCCCeeeeEeccCCCCCeEEE----EEeCCCCcEEEeCCCC--------c---eEEeeeCCcCCEEEEEECCC-CcEE
Q 024676 13 HGHSRPVVDLFYSPITPDGFFLV----SASKDSSPMLRNGETG--------D---WIGTFEGHKGAVWSCCLDAN-ALFS 76 (264)
Q Consensus 13 ~~h~~~v~~~~~~~~~~~g~~l~----t~s~d~~v~i~~~~~~--------~---~~~~~~~H~~~V~~v~~~~~-~~~l 76 (264)
..|..+|.+|+|+| +|++|+ +|+.|+.|++||+.++ + .+..+.+|.+.|.+++|+|+ +.++
T Consensus 89 ~~~~~~v~~l~~sp---dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l 165 (434)
T 2oit_A 89 VPMKFPIHHLALSC---DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMV 165 (434)
T ss_dssp ECCSSCEEEEEECT---TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEE
T ss_pred ccCCCcccEEEEcC---CCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEE
Confidence 45777899999996 899999 8999999999998654 1 24567789999999999998 7899
Q ss_pred EEecCCCeEEEEeCCCCcEEE-EeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEec------cCCCCeE
Q 024676 77 ASGSADFTAKLWDALTGDEKH-SFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG------NSSGSIR 149 (264)
Q Consensus 77 ~s~s~D~~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~------~~~~~i~ 149 (264)
++++.|++|++||+.++.... ...|...|.+++|+|++++|++|+.|+.|++||++ ++....... .+...+.
T Consensus 166 as~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~ 244 (434)
T 2oit_A 166 AVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVL 244 (434)
T ss_dssp EEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEE
T ss_pred EEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEE
Confidence 999999999999999885543 33477899999999999999999999999999987 322111111 1223788
Q ss_pred EEEEecCCCeEEEEeeCCCe------EEEEECCCC
Q 024676 150 TVAWLHSDQTILSSCTDSGG------VRLWDARSG 178 (264)
Q Consensus 150 ~~~~~~~~~~~~~~~~~d~~------v~iwd~~~~ 178 (264)
+++|.++...+++....+|. +++||+++.
T Consensus 245 ~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 245 DVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 99999866555555545433 999999865
No 147
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.87 E-value=5.9e-20 Score=151.96 Aligned_cols=225 Identities=12% Similarity=0.168 Sum_probs=154.6
Q ss_pred EEEEEeCCCCcEEEeCC-CCc--eEEeeeCCcCCEEEEEECCCCcEEEEecCC-CeEEEEeCC--CCc--EEEEeecCCe
Q 024676 33 FLVSASKDSSPMLRNGE-TGD--WIGTFEGHKGAVWSCCLDANALFSASGSAD-FTAKLWDAL--TGD--EKHSFEHKHI 104 (264)
Q Consensus 33 ~l~t~s~d~~v~i~~~~-~~~--~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D-~~v~iwd~~--~~~--~~~~~~~~~~ 104 (264)
.+++++.|+.|++|++. +++ .+..+ .|...+..++|+|++.++++++.+ +.|++|++. ++. .+..+.....
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 85 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGS 85 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSC
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCC
Confidence 44555889999999985 343 23333 467788899999999988777776 999999987 554 3334444457
Q ss_pred EEEEEECCCCCEEEEeeC-CCcEEEeeCCCCCC-CCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCC-Ccee
Q 024676 105 VRACAFSEDTHLLLTGGF-EKILRIFDLNRPDA-PPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARS-GKIV 181 (264)
Q Consensus 105 v~~~~~~~~~~~l~s~~~-d~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~-~~~~ 181 (264)
+..++|+|+++++++++. ++.+.+||++.+.. ...........+..++|+|++..+++++..++.|++||+++ ++..
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 165 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV 165 (343)
T ss_dssp CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE
T ss_pred CcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCcee
Confidence 888999999998877665 78899999842211 11111123345777889988887777765779999999987 6543
Q ss_pred E------EecCCCCEEEEEEcCCCcEE-EEe-CCCcEEEEECCC--cee--eeEEe-cCC------CCceeeEcCCCCCE
Q 024676 182 Q------TLETKSPVTSAEVSRDGRYI-TTA-DGSSVKFWDANH--FGL--VKGYN-MPC------NTESASLEPKLGNI 242 (264)
Q Consensus 182 ~------~~~~~~~v~~~~~s~~~~~l-~~~-~~~~i~iwd~~~--~~~--~~~~~-~~~------~~~~~~~~~~~~~~ 242 (264)
. .......+..++++|+++++ +++ .++.|.+||+.. ++. ...+. .+. .+..+.+.++...+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l 245 (343)
T 1ri6_A 166 AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHL 245 (343)
T ss_dssp EEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEE
T ss_pred eecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEE
Confidence 2 22234568889999999865 444 468999999953 322 23332 111 12246777753344
Q ss_pred EEEecCCCeEEEEEcC
Q 024676 243 FIAGGEDMWVHVFDFH 258 (264)
Q Consensus 243 ~~~gs~d~~v~vwd~~ 258 (264)
+++++.|+.|++||+.
T Consensus 246 ~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 246 YACDRTASLITVFSVS 261 (343)
T ss_dssp EEEETTTTEEEEEEEC
T ss_pred EEEecCCCEEEEEEEc
Confidence 5577789999999987
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.87 E-value=1.6e-20 Score=170.66 Aligned_cols=243 Identities=14% Similarity=0.148 Sum_probs=169.9
Q ss_pred eeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCC-----CceEEeeeCCcCC--------------EEEEEECCC
Q 024676 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET-----GDWIGTFEGHKGA--------------VWSCCLDAN 72 (264)
Q Consensus 12 ~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~-----~~~~~~~~~H~~~--------------V~~v~~~~~ 72 (264)
+..|...+..++|+| ||++|+.+ .|+.|++|++.+ ++..+....+... +.+++|+||
T Consensus 116 l~~~~~~~~~~~~Sp---dG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpD 191 (706)
T 2z3z_A 116 LFDTNEETASLDFSP---VGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPK 191 (706)
T ss_dssp EECCTTCCTTCEECT---TSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTT
T ss_pred ccCCcccccCCcCCC---CCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCC
Confidence 345777888999996 99999884 789999999998 8766544444333 478999999
Q ss_pred CcEEEEec---------------------------------CCCeEEEEeCCCCcEEEEe---ecCCeEEEEEECCCCCE
Q 024676 73 ALFSASGS---------------------------------ADFTAKLWDALTGDEKHSF---EHKHIVRACAFSEDTHL 116 (264)
Q Consensus 73 ~~~l~s~s---------------------------------~D~~v~iwd~~~~~~~~~~---~~~~~v~~~~~~~~~~~ 116 (264)
+++|++++ .+..|++||+.+++..... .+...+..+.|+|+++.
T Consensus 192 g~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 271 (706)
T 2z3z_A 192 GSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENI 271 (706)
T ss_dssp SSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSE
T ss_pred CCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCE
Confidence 99999887 4578999999988755443 35567999999999999
Q ss_pred EEEeeCCC-----cEEEeeCCCCCCCCeEe-ccCCC---CeEEEEEec--CCCeEEEEeeCCCeEEEEECC-CCceeEEe
Q 024676 117 LLTGGFEK-----ILRIFDLNRPDAPPREV-GNSSG---SIRTVAWLH--SDQTILSSCTDSGGVRLWDAR-SGKIVQTL 184 (264)
Q Consensus 117 l~s~~~d~-----~i~~~d~~~~~~~~~~~-~~~~~---~i~~~~~~~--~~~~~~~~~~~d~~v~iwd~~-~~~~~~~~ 184 (264)
|++++.++ .+++||+.+++...... ..... .+..++|+| ++. +++++..++.++||+++ +++.+..+
T Consensus 272 l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~-~l~~~~~~g~~~l~~~~~~~~~~~~l 350 (706)
T 2z3z_A 272 LYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQ-FIWQSRRDGWNHLYLYDTTGRLIRQV 350 (706)
T ss_dssp EEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSE-EEEEECTTSSCEEEEEETTSCEEEEC
T ss_pred EEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCE-EEEEEccCCccEEEEEECCCCEEEec
Confidence 99887776 89999998763221211 11111 124568887 655 66677778899999876 56666656
Q ss_pred cC-CCCEEE-EEEcCCCcEEE-EeC-CC----cEEEEECCCceeeeEEecCCCCceeeEcCCCCCEEEEecCC----CeE
Q 024676 185 ET-KSPVTS-AEVSRDGRYIT-TAD-GS----SVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGED----MWV 252 (264)
Q Consensus 185 ~~-~~~v~~-~~~s~~~~~l~-~~~-~~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d----~~v 252 (264)
.. ...+.. +.|+|+++.|+ ++. ++ .|..||+.+++ .+.+..........++|+ +++++..+.+ ..+
T Consensus 351 ~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~spd-g~~l~~~~~~~~~p~~i 428 (706)
T 2z3z_A 351 TKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLTPESGMHRTQLSPD-GSAIIDIFQSPTVPRKV 428 (706)
T ss_dssp CCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESCCSSSEEEEEECTT-SSEEEEEEECSSCSCEE
T ss_pred CCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceeccCCCceEEEEECCC-CCEEEEEecCCCCCcEE
Confidence 43 345666 79999997654 333 33 56667776654 333333334456677775 6666654333 569
Q ss_pred EEEEcCcce
Q 024676 253 HVFDFHTGE 261 (264)
Q Consensus 253 ~vwd~~~g~ 261 (264)
++||+++++
T Consensus 429 ~l~d~~~~~ 437 (706)
T 2z3z_A 429 TVTNIGKGS 437 (706)
T ss_dssp EEEESSSCE
T ss_pred EEEECCCCe
Confidence 999998775
No 149
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.87 E-value=5.9e-21 Score=170.05 Aligned_cols=235 Identities=14% Similarity=0.073 Sum_probs=161.2
Q ss_pred cCCCeeeeEeccCCCCCeEEEEEeC-CCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecC---CCeEEEEeC
Q 024676 15 HSRPVVDLFYSPITPDGFFLVSASK-DSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSA---DFTAKLWDA 90 (264)
Q Consensus 15 h~~~v~~~~~~~~~~~g~~l~t~s~-d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~---D~~v~iwd~ 90 (264)
+..+|+.+.|+| ||++||.++. |+++++|++.+++..+....|...|..++|+|| +++++++. +...+||.+
T Consensus 20 ~~~~~~~~~~~~---DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 20 IAVEKYSLQGVV---DGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp HHSCEEEEEEEE---TTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEE
T ss_pred hccchheeecCC---CCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEE
Confidence 456899999996 9999999887 999999998766654433334468999999999 77777665 566677654
Q ss_pred CC---CcEEEEeecCCeEEEEEECCCCCE-EEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeC
Q 024676 91 LT---GDEKHSFEHKHIVRACAFSEDTHL-LLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTD 166 (264)
Q Consensus 91 ~~---~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 166 (264)
.. +... .+.....+...+|+|+++. +++.+.++.+.+||+.+++.. .+..+.. ..++|+|++..++.++ .
T Consensus 96 ~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~--~l~~~~~--~~~~~spDG~~la~~~-~ 169 (582)
T 3o4h_A 96 NTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLR--ELARLPG--FGFVSDIRGDLIAGLG-F 169 (582)
T ss_dssp ETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEE--EEEEESS--CEEEEEEETTEEEEEE-E
T ss_pred eccCCCccc-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEE--EeecCCC--ceEEECCCCCEEEEEE-E
Confidence 33 2222 3332333445677887743 334444444559999776432 2222222 6788898877655443 3
Q ss_pred C----CeEEEEECCCCceeEEecCCCCEEEEEEcCCCcEEEEeC-CC--cEEEEECCCceeeeEEecCC-CCceee----
Q 024676 167 S----GGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTAD-GS--SVKFWDANHFGLVKGYNMPC-NTESAS---- 234 (264)
Q Consensus 167 d----~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~~--~i~iwd~~~~~~~~~~~~~~-~~~~~~---- 234 (264)
+ +.|++||+.+++......+...+..++|||||++|++++ ++ .|++||+.+++.. .+.... ......
T Consensus 170 ~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~ 248 (582)
T 3o4h_A 170 FGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAI 248 (582)
T ss_dssp EETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEE
T ss_pred cCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccc
Confidence 3 679999999988764444556689999999999887543 56 7999999887765 333221 122344
Q ss_pred ----EcCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 235 ----LEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 235 ----~~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
++|+ |.++++++.|+.+++|++ |+.+
T Consensus 249 ~~~~~spd-g~~~~~~~~~g~~~l~~~--g~~~ 278 (582)
T 3o4h_A 249 TWLGYLPD-GRLAVVARREGRSAVFID--GERV 278 (582)
T ss_dssp EEEEECTT-SCEEEEEEETTEEEEEET--TEEE
T ss_pred cceeEcCC-CcEEEEEEcCCcEEEEEE--CCee
Confidence 7775 599999999999999998 6543
No 150
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.87 E-value=2.2e-19 Score=151.09 Aligned_cols=241 Identities=9% Similarity=0.073 Sum_probs=164.7
Q ss_pred cCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCC-CCceEEeee--CCcCCEEEEEECCCCcE--EEEec---------
Q 024676 15 HSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGE-TGDWIGTFE--GHKGAVWSCCLDANALF--SASGS--------- 80 (264)
Q Consensus 15 h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~-~~~~~~~~~--~H~~~V~~v~~~~~~~~--l~s~s--------- 80 (264)
+...+..++|+| +|++|++++.+ .+.+|++. ++++..... .+ +....++|+|++++ +++++
T Consensus 38 ~~~~~~~~a~sp---dg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 112 (365)
T 1jof_A 38 QDEPISWMTFDH---ERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYAN 112 (365)
T ss_dssp TTCCCSEEEECT---TSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred CCCCCcEEEECC---CCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccc
Confidence 344677888885 99999999988 89999987 777654332 12 23445889999984 55664
Q ss_pred ----CCCeEEEEeCC-CCcEEEEee-----cCCeEEEEEECCCCCEEEEeeC-CCcEEEeeCC-CCCCCC-eEec--cCC
Q 024676 81 ----ADFTAKLWDAL-TGDEKHSFE-----HKHIVRACAFSEDTHLLLTGGF-EKILRIFDLN-RPDAPP-REVG--NSS 145 (264)
Q Consensus 81 ----~D~~v~iwd~~-~~~~~~~~~-----~~~~v~~~~~~~~~~~l~s~~~-d~~i~~~d~~-~~~~~~-~~~~--~~~ 145 (264)
.++++++|++. .++...... +...+..++|+|++++++++.. ++.|++|+++ +++... .... .+.
T Consensus 113 ~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g 192 (365)
T 1jof_A 113 PFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPG 192 (365)
T ss_dssp EESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTT
T ss_pred eeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCC
Confidence 69999999997 455433332 3457899999999998887664 6899999997 554321 1121 124
Q ss_pred CCeEEEEEecCCCeEEEEeeCCCeEEEEECC--CCcee---EEec---CC----C-------CEEEEE-EcCCCcEEEEe
Q 024676 146 GSIRTVAWLHSDQTILSSCTDSGGVRLWDAR--SGKIV---QTLE---TK----S-------PVTSAE-VSRDGRYITTA 205 (264)
Q Consensus 146 ~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~--~~~~~---~~~~---~~----~-------~v~~~~-~s~~~~~l~~~ 205 (264)
.....++|+|++..++++...++.|.+|++. +++.. ..+. .. . .+..++ ++|||++|..+
T Consensus 193 ~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~ 272 (365)
T 1jof_A 193 DHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFAS 272 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEE
T ss_pred CCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEE
Confidence 5678899999887776666667899999765 56542 1221 11 2 478899 99999876543
Q ss_pred C--CC-----cEEEEECC-Cceeee---EEe-cCCCCceeeEcCC--CCCEEEEecC-CCeEEEEEcCcc
Q 024676 206 D--GS-----SVKFWDAN-HFGLVK---GYN-MPCNTESASLEPK--LGNIFIAGGE-DMWVHVFDFHTG 260 (264)
Q Consensus 206 ~--~~-----~i~iwd~~-~~~~~~---~~~-~~~~~~~~~~~~~--~~~~~~~gs~-d~~v~vwd~~~g 260 (264)
+ +. .|.+|++. +++... ... ....+..++++|+ +++++++++. ++.|.+|+++..
T Consensus 273 ~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 273 SRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 2 23 89999996 454332 122 2334556677774 4788887776 489999988654
No 151
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=1.9e-20 Score=170.15 Aligned_cols=237 Identities=11% Similarity=0.086 Sum_probs=162.7
Q ss_pred CCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCC----
Q 024676 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALT---- 92 (264)
Q Consensus 17 ~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~---- 92 (264)
..|.+++|+| |+.++++ .|+.+++||..+++.. .+..|.+.+..++|+||+++++++ .|+.|++||+.+
T Consensus 82 ~~v~~~~~sp---d~~~~~~--~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~ 154 (706)
T 2z3z_A 82 FPSFRTLDAG---RGLVVLF--TQGGLVGFDMLARKVT-YLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEG 154 (706)
T ss_dssp CCCEEEEETT---TTEEEEE--ETTEEEEEETTTTEEE-EEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSC
T ss_pred cCceeEEECC---CCeEEEE--ECCEEEEEECCCCceE-EccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCccccc
Confidence 5689999996 6444444 4599999999988754 344566778889999999999884 689999999988
Q ss_pred -CcEEEEeec-CCe--------------EEEEEECCCCCEEEEee---------------------------------CC
Q 024676 93 -GDEKHSFEH-KHI--------------VRACAFSEDTHLLLTGG---------------------------------FE 123 (264)
Q Consensus 93 -~~~~~~~~~-~~~--------------v~~~~~~~~~~~l~s~~---------------------------------~d 123 (264)
++....... ... +..+.|+|+++.|++++ .+
T Consensus 155 ~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~ 234 (706)
T 2z3z_A 155 MSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHH 234 (706)
T ss_dssp CCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCE
T ss_pred CCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCe
Confidence 765543322 222 47899999999999987 34
Q ss_pred CcEEEeeCCCCCCCCeEe-ccCCCCeEEEEEecCCCeEEEEeeCC----CeEEEEECCCCceeEEe-c--CC---CCEEE
Q 024676 124 KILRIFDLNRPDAPPREV-GNSSGSIRTVAWLHSDQTILSSCTDS----GGVRLWDARSGKIVQTL-E--TK---SPVTS 192 (264)
Q Consensus 124 ~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~d----~~v~iwd~~~~~~~~~~-~--~~---~~v~~ 192 (264)
..+++||+.+++...... ..+...+..++|+|++..++++..+. ..|.+||+++++....+ . .. ..+..
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 314 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHP 314 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSC
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCC
Confidence 679999998764321111 13445688999999887666654432 28999999998433222 1 11 12456
Q ss_pred EEEcC--CCcEEEEe-CCCcEEEEECC-CceeeeEEecCCCCc-e-eeEcCCCCCEE-EEecCCC----eEEEEEcCcce
Q 024676 193 AEVSR--DGRYITTA-DGSSVKFWDAN-HFGLVKGYNMPCNTE-S-ASLEPKLGNIF-IAGGEDM----WVHVFDFHTGE 261 (264)
Q Consensus 193 ~~~s~--~~~~l~~~-~~~~i~iwd~~-~~~~~~~~~~~~~~~-~-~~~~~~~~~~~-~~gs~d~----~v~vwd~~~g~ 261 (264)
+.|+| ||++++++ .++.+++|++. .++.++.+..+.... . ..++++ ++.| ++++.++ .|+.||+.+++
T Consensus 315 ~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spd-g~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 315 LTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPK-GTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp CEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTT-SSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred ceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCC-CCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 89999 99987765 46788888875 455555554433222 3 567775 5544 5555554 77777877664
No 152
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.85 E-value=5.8e-20 Score=167.32 Aligned_cols=243 Identities=15% Similarity=0.093 Sum_probs=163.2
Q ss_pred EeeccCC---CeeeeEeccCCCCCeEEEEEeCC---------CCcEEEeCCCCceE--EeeeCCcCCEEEEEECCCCcEE
Q 024676 11 VCHGHSR---PVVDLFYSPITPDGFFLVSASKD---------SSPMLRNGETGDWI--GTFEGHKGAVWSCCLDANALFS 76 (264)
Q Consensus 11 ~~~~h~~---~v~~~~~~~~~~~g~~l~t~s~d---------~~v~i~~~~~~~~~--~~~~~H~~~V~~v~~~~~~~~l 76 (264)
++.+|.. .|..++|+| ||++|++++.+ +.+.+||+.+++.. ....+|...+..++|+||++++
T Consensus 52 ~~~~~~~~~~~v~~~~~Sp---Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~l 128 (723)
T 1xfd_A 52 LIEGKKIESLRAIRYEISP---DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQL 128 (723)
T ss_dssp EECTTTTTTTTCSEEEECT---TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCE
T ss_pred EeccccccccccceEEECC---CCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEE
Confidence 3345554 388999996 99999999876 56679999988752 2233566668899999999999
Q ss_pred EEecCCCeEEEEeCCCCcEEEEeec-CCe------------------EEEEEECCCCCEEEEeeCCC-------------
Q 024676 77 ASGSADFTAKLWDALTGDEKHSFEH-KHI------------------VRACAFSEDTHLLLTGGFEK------------- 124 (264)
Q Consensus 77 ~s~s~D~~v~iwd~~~~~~~~~~~~-~~~------------------v~~~~~~~~~~~l~s~~~d~------------- 124 (264)
+.++. +.|++||+.+++....... ... +..++|+|+++.|++++.|+
T Consensus 129 a~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~ 207 (723)
T 1xfd_A 129 IFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTG 207 (723)
T ss_dssp EEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSS
T ss_pred EEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCC
Confidence 98875 7999999998876554432 222 26899999999999887553
Q ss_pred ---------------------cEEEeeCCCCCCCCeEecc------CCCCeEEEEEecCCCeEEEEee---CCCeEEEEE
Q 024676 125 ---------------------ILRIFDLNRPDAPPREVGN------SSGSIRTVAWLHSDQTILSSCT---DSGGVRLWD 174 (264)
Q Consensus 125 ---------------------~i~~~d~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~~~~~~~---~d~~v~iwd 174 (264)
.+++||+.+++.. ..+.. +...+..++|+|++..+++... .+..|.+||
T Consensus 208 ~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~-~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d 286 (723)
T 1xfd_A 208 SIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHD-LEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCD 286 (723)
T ss_dssp SSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCC-EECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEE
T ss_pred cCCCcceeccCCCCCCCCCeeEEEEEECCCCcee-EEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEe
Confidence 7899999876532 22222 2456788999997765444433 235799999
Q ss_pred CCCCceeEEecC--CCCE----EEEEEcCCCcEEE---EeCCC------cEEEEE-CCCce--eeeEEec-CCCCce-ee
Q 024676 175 ARSGKIVQTLET--KSPV----TSAEVSRDGRYIT---TADGS------SVKFWD-ANHFG--LVKGYNM-PCNTES-AS 234 (264)
Q Consensus 175 ~~~~~~~~~~~~--~~~v----~~~~~s~~~~~l~---~~~~~------~i~iwd-~~~~~--~~~~~~~-~~~~~~-~~ 234 (264)
+.++++...+.. ...+ ..+.|+|||+.|+ +..++ .|.+|| ...+. +.+.+.. ...... ..
T Consensus 287 ~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~ 366 (723)
T 1xfd_A 287 ATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILA 366 (723)
T ss_dssp TTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEE
T ss_pred CCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeE
Confidence 999987654432 2222 3789999998544 23455 466777 33333 1333322 122222 46
Q ss_pred EcCCCCCEEEEe-cCC--CeEEEEEcCc
Q 024676 235 LEPKLGNIFIAG-GED--MWVHVFDFHT 259 (264)
Q Consensus 235 ~~~~~~~~~~~g-s~d--~~v~vwd~~~ 259 (264)
++++ ++.|+.. ..+ +.+++|+++.
T Consensus 367 ~spd-g~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 367 YDEK-GNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp EETT-TTEEEEEESSSCTTCCEEEEECS
T ss_pred EcCC-CCEEEEEEcCCCCcceEEEEEeC
Confidence 7775 6666554 444 7899998764
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.85 E-value=2.9e-20 Score=169.41 Aligned_cols=235 Identities=12% Similarity=0.019 Sum_probs=159.4
Q ss_pred eeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcC---CEEEEEECCCCcEEEEecC---------CCeEEEE
Q 024676 21 DLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKG---AVWSCCLDANALFSASGSA---------DFTAKLW 88 (264)
Q Consensus 21 ~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~---~V~~v~~~~~~~~l~s~s~---------D~~v~iw 88 (264)
.+.|+| ||+++++ +.|+.+++|+..+++....+.+|.. .|.+++|+||++++++++. |+.+++|
T Consensus 20 ~~~~s~---dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 20 FPNWIS---GQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCEESS---SSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred ccEECC---CCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEE
Confidence 678885 8876655 4699999999999988777776654 4889999999999988876 7899999
Q ss_pred eCCCCcEEEEeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCe-----------------EEE
Q 024676 89 DALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSI-----------------RTV 151 (264)
Q Consensus 89 d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i-----------------~~~ 151 (264)
|+.+++.+........+..++|+|+++.|+.+. ++.|++|++.+++........+...+ ..+
T Consensus 96 d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 96 DLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp ETTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred ECCCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccE
Confidence 999887521122235678899999999998875 78999999977653211111111111 478
Q ss_pred EEecCCCeEEEEeeCCC---------------------------------eEEEEECCCCcee--EEe-------cCCCC
Q 024676 152 AWLHSDQTILSSCTDSG---------------------------------GVRLWDARSGKIV--QTL-------ETKSP 189 (264)
Q Consensus 152 ~~~~~~~~~~~~~~~d~---------------------------------~v~iwd~~~~~~~--~~~-------~~~~~ 189 (264)
+|+|++..++.+..+++ .|++||+.+++.. ..+ .+...
T Consensus 175 ~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 254 (719)
T 1z68_A 175 WWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYY 254 (719)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEE
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcce
Confidence 99998887666554422 7889999988753 122 13345
Q ss_pred EEEEEEcCCCcEEEEeC--C---CcEEEEE----CCCceeeeEEe----cCC-CCc-----eeeEcCCCCC-EEE-EecC
Q 024676 190 VTSAEVSRDGRYITTAD--G---SSVKFWD----ANHFGLVKGYN----MPC-NTE-----SASLEPKLGN-IFI-AGGE 248 (264)
Q Consensus 190 v~~~~~s~~~~~l~~~~--~---~~i~iwd----~~~~~~~~~~~----~~~-~~~-----~~~~~~~~~~-~~~-~gs~ 248 (264)
+.+++||||++++++.. + ..|.+|| +.+++....+. .+. ... ...++|+ |+ +++ +...
T Consensus 255 ~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spd-g~~l~~~~~~~ 333 (719)
T 1z68_A 255 FSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYD-AISYYKIFSDK 333 (719)
T ss_dssp EEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTT-SSCEEEEEECT
T ss_pred EEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCC-CCeEEEEEEcc
Confidence 88999999988766532 1 2488899 77776544331 221 122 4567775 55 333 4445
Q ss_pred CC--eEEEEEcCcce
Q 024676 249 DM--WVHVFDFHTGE 261 (264)
Q Consensus 249 d~--~v~vwd~~~g~ 261 (264)
++ .|++||+.+++
T Consensus 334 ~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 334 DGYKHIHYIKDTVEN 348 (719)
T ss_dssp TSCEEEEEESSCSTT
T ss_pred CCceEEEEEECCCCc
Confidence 55 56666766554
No 154
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.85 E-value=1.1e-17 Score=135.73 Aligned_cols=239 Identities=10% Similarity=0.159 Sum_probs=173.1
Q ss_pred ccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeee------CCcCCEEEEEE-CCCCcEEEEecC-CCeE
Q 024676 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFE------GHKGAVWSCCL-DANALFSASGSA-DFTA 85 (264)
Q Consensus 14 ~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~------~H~~~V~~v~~-~~~~~~l~s~s~-D~~v 85 (264)
+|...+.+|+++| +|+++++.+.++.|.+|+.. ++.+..+. +|...+..+++ .+++.++++... ++.|
T Consensus 27 g~~~~p~~v~~~~---~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i 102 (286)
T 1q7f_A 27 GQFTEPSGVAVNA---QNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQI 102 (286)
T ss_dssp TCBSCEEEEEECT---TCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEE
T ss_pred CccCCCceEEECC---CCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEE
Confidence 5667788999985 78888888899999999987 66655553 35567899999 578877777643 8899
Q ss_pred EEEeCCCCcEEEEeec--CCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEec--cCCCCeEEEEEecCCCeEE
Q 024676 86 KLWDALTGDEKHSFEH--KHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG--NSSGSIRTVAWLHSDQTIL 161 (264)
Q Consensus 86 ~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~ 161 (264)
++|| .++..+..+.. ...+..++++|+++++++...++.|.+||.. ++. ..... ........+++.+++ .++
T Consensus 103 ~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~p~~i~~~~~g-~l~ 178 (286)
T 1q7f_A 103 QIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNV-LHKFGCSKHLEFPNGVVVNDKQ-EIF 178 (286)
T ss_dssp EEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEEECTTTCSSEEEEEECSSS-EEE
T ss_pred EEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCE-EEEeCCCCccCCcEEEEECCCC-CEE
Confidence 9999 56666666542 3468899999999988887778999999964 222 12222 223457788887754 466
Q ss_pred EEeeCCCeEEEEECCCCceeEEecCC---CCEEEEEEcCCCcEEEEeC-CC-cEEEEECCCceeeeEEecCCC---Ccee
Q 024676 162 SSCTDSGGVRLWDARSGKIVQTLETK---SPVTSAEVSRDGRYITTAD-GS-SVKFWDANHFGLVKGYNMPCN---TESA 233 (264)
Q Consensus 162 ~~~~~d~~v~iwd~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~-~~-~i~iwd~~~~~~~~~~~~~~~---~~~~ 233 (264)
++...++.|++||.. ++.+..+... ..+..++++|+|+++++.. ++ .|.+||. +++.+..+..... +..+
T Consensus 179 v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i 256 (286)
T 1q7f_A 179 ISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDV 256 (286)
T ss_dssp EEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEE
T ss_pred EEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeE
Confidence 666667899999975 5555556432 4688999999998877764 44 8999995 4555666654322 3456
Q ss_pred eEcCCCCCEEEEecCCCeEEEEEcCcceeeC
Q 024676 234 SLEPKLGNIFIAGGEDMWVHVFDFHTGEQIG 264 (264)
Q Consensus 234 ~~~~~~~~~~~~gs~d~~v~vwd~~~g~~i~ 264 (264)
++.+ +++++++ +.|+.|++|++....+++
T Consensus 257 ~~~~-~g~l~vs-~~~~~v~v~~~~~~~pvg 285 (286)
T 1q7f_A 257 ALMD-DGSVVLA-SKDYRLYIYRYVQLAPVG 285 (286)
T ss_dssp EEET-TTEEEEE-ETTTEEEEEECSCCCCTT
T ss_pred EECC-CCcEEEE-CCCCeEEEEEcccccccC
Confidence 6777 4777777 569999999988766553
No 155
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.84 E-value=8.7e-19 Score=144.56 Aligned_cols=203 Identities=15% Similarity=0.120 Sum_probs=153.8
Q ss_pred CeeeeEeccCCCCCeEE-EEEeCCCCcEEEeCCCCceEEeeeC-C----cCCEEEEEECCCCcEEEEec-----------
Q 024676 18 PVVDLFYSPITPDGFFL-VSASKDSSPMLRNGETGDWIGTFEG-H----KGAVWSCCLDANALFSASGS----------- 80 (264)
Q Consensus 18 ~v~~~~~~~~~~~g~~l-~t~s~d~~v~i~~~~~~~~~~~~~~-H----~~~V~~v~~~~~~~~l~s~s----------- 80 (264)
.+..++|+| +|++| ++++.++.+.+||..+++.+..+.. + ...+..++|+|+++++++++
T Consensus 35 ~~~~~~~s~---dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~ 111 (337)
T 1pby_B 35 TPMVPMVAP---GGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFE 111 (337)
T ss_dssp CCCCEEECT---TSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEE
T ss_pred CccceEEcC---CCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccccccccc
Confidence 467889986 88654 6667788999999999988776653 2 22567899999998887775
Q ss_pred -CCCeEEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEec-----------------
Q 024676 81 -ADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG----------------- 142 (264)
Q Consensus 81 -~D~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~----------------- 142 (264)
.++.|.+||+.+++....+.....+..++|+|++++++++ ++.+.+||+.+++.......
T Consensus 112 ~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 189 (337)
T 1pby_B 112 VQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVW 189 (337)
T ss_dssp ECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCC
T ss_pred ccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEe
Confidence 5799999999998887777766677888999999988877 68899999875432110000
Q ss_pred ------------------------------------------------cCCCCeEEEEEecCCCeEEEEeeCCCeEEEEE
Q 024676 143 ------------------------------------------------NSSGSIRTVAWLHSDQTILSSCTDSGGVRLWD 174 (264)
Q Consensus 143 ------------------------------------------------~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd 174 (264)
.+...+..++|+|++..++++ ++.|.+||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~v~~~d 266 (337)
T 1pby_B 190 NQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA---YNVLESFD 266 (337)
T ss_dssp CCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE---ESEEEEEE
T ss_pred eeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe---CCeEEEEE
Confidence 001123457888877665554 48999999
Q ss_pred CCCCceeEEecCCCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEEecCC
Q 024676 175 ARSGKIVQTLETKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPC 228 (264)
Q Consensus 175 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~ 228 (264)
+++++.+..+.....+.+++++|+|+++.. +.++.|++||+.+++.+..+..+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 267 LEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp TTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGG
T ss_pred CCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCC
Confidence 999998877776667889999999986554 457899999999999888887653
No 156
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.83 E-value=2.1e-18 Score=163.38 Aligned_cols=237 Identities=11% Similarity=0.042 Sum_probs=175.5
Q ss_pred eeccCC-CeeeeEeccCCCCCeEEEEEeCCCCcE-EEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEe
Q 024676 12 CHGHSR-PVVDLFYSPITPDGFFLVSASKDSSPM-LRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (264)
Q Consensus 12 ~~~h~~-~v~~~~~~~~~~~g~~l~t~s~d~~v~-i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd 89 (264)
+.+|.. .+..+.|+ ||+.|+.++.+..+. +|+..+++.. .+.+|...+..++|+||++++++++.|+.+++||
T Consensus 332 ~~~~~~~~~~~~~~s----dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d 406 (1045)
T 1k32_A 332 VPEPLRIRYVRRGGD----TKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVD 406 (1045)
T ss_dssp CSCCSCEEEEEECSS----SEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccCCCcceEEeeeEc----CCCeEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEE
Confidence 345666 77777776 788999999888888 8898877654 3448889999999999999999999999999999
Q ss_pred CCCCcEEEEe-ecCCeEEEEEECCCCCEEEEeeCCC----------cEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCC
Q 024676 90 ALTGDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEK----------ILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQ 158 (264)
Q Consensus 90 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~----------~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 158 (264)
+.+++..... .|...+..++|+|++++|++++.++ .+++||+.+++ ...+..+...+..++|+|++.
T Consensus 407 ~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~--~~~l~~~~~~~~~~~~spdG~ 484 (1045)
T 1k32_A 407 LETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK--IFAATTENSHDYAPAFDADSK 484 (1045)
T ss_dssp TTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE--EEECSCSSSBEEEEEECTTSC
T ss_pred CCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc--EEEeeCCCcccCCceEcCCCC
Confidence 9999877766 5777889999999999998887654 89999998654 344445566778889998877
Q ss_pred eEEEEeeCCCeEEEEECCCCce-------------------------------------------eEEec-CCCCEEEEE
Q 024676 159 TILSSCTDSGGVRLWDARSGKI-------------------------------------------VQTLE-TKSPVTSAE 194 (264)
Q Consensus 159 ~~~~~~~~d~~v~iwd~~~~~~-------------------------------------------~~~~~-~~~~v~~~~ 194 (264)
.++.. +.++..++|+...... +..+. +...+..+.
T Consensus 485 ~l~~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~ 563 (1045)
T 1k32_A 485 NLYYL-SYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMII 563 (1045)
T ss_dssp EEEEE-ESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEE
T ss_pred EEEEE-ecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheE
Confidence 65544 5556666676432211 11221 224578899
Q ss_pred EcCCCcEEEE------------eC--CCcEEEEECCCceeeeEEecCCCCceeeEcCCCCCEEEEecCCCeEEEEEcCcc
Q 024676 195 VSRDGRYITT------------AD--GSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTG 260 (264)
Q Consensus 195 ~s~~~~~l~~------------~~--~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g 260 (264)
++||+++++. +. ...+.+||+.+++.. .+. .......+++ +|+.|++++.| .+++||+.++
T Consensus 564 ~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~--~~v~~~~~S~-DG~~l~~~~~~-~i~~~d~~~~ 638 (1045)
T 1k32_A 564 PLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT-EVK--NNLTDLRLSA-DRKTVMVRKDD-GKIYTFPLEK 638 (1045)
T ss_dssp ECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE-EEE--EEEEEEEECT-TSCEEEEEETT-SCEEEEESSC
T ss_pred EcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEE-Eee--cCcceEEECC-CCCEEEEEcCC-cEEEEeCccC
Confidence 9999986663 11 346888999887643 232 2234556776 58888888877 7999999887
Q ss_pred e
Q 024676 261 E 261 (264)
Q Consensus 261 ~ 261 (264)
+
T Consensus 639 ~ 639 (1045)
T 1k32_A 639 P 639 (1045)
T ss_dssp T
T ss_pred c
Confidence 6
No 157
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.83 E-value=4.4e-19 Score=167.99 Aligned_cols=230 Identities=12% Similarity=0.007 Sum_probs=173.6
Q ss_pred CeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeC-----------CcCCEEEEEEC-CCCcEEEEecCCCeE
Q 024676 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEG-----------HKGAVWSCCLD-ANALFSASGSADFTA 85 (264)
Q Consensus 18 ~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~-----------H~~~V~~v~~~-~~~~~l~s~s~D~~v 85 (264)
.+..+.|+| ||++|+.+ .++.+.+|+....+.. .+.+ |...+.+++|+ ||++++++++ ++.+
T Consensus 246 ~~~~~~~Sp---DG~~la~~-~~~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i 319 (1045)
T 1k32_A 246 DYYPRHLNT---DGRRILFS-KGGSIYIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQA 319 (1045)
T ss_dssp SSCEEEEEE---SSSCEEEE-ETTEEEEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEE
T ss_pred CcceeeEcC---CCCEEEEE-eCCEEEEecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEE
Confidence 355678885 89988887 4889999998544433 5554 44578999999 9999988887 7899
Q ss_pred EEEeCCCCcEEEEeecCC-eEEEEEECCCCCEEEEeeCCCcEE-EeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEE
Q 024676 86 KLWDALTGDEKHSFEHKH-IVRACAFSEDTHLLLTGGFEKILR-IFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (264)
Q Consensus 86 ~iwd~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~s~~~d~~i~-~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 163 (264)
.+|+..++.......+.. .+..+.|+ +++.+++++.+..+. +|++.+++. ..+..+...+..++|+|++..+ +.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~--~~l~~~~~~~~~~~~SpDG~~l-a~ 395 (1045)
T 1k32_A 320 FIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKA--EKFEENLGNVFAMGVDRNGKFA-VV 395 (1045)
T ss_dssp EEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCE--EECCCCCCSEEEEEECTTSSEE-EE
T ss_pred EEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCc--eEecCCccceeeeEECCCCCEE-EE
Confidence 999998887655545666 78999999 999999988888888 889876542 2333556788999999877654 45
Q ss_pred eeCCCeEEEEECCCCceeEEe-cCCCCEEEEEEcCCCcEEEEe-CC----------CcEEEEECCCceeeeEEecC-CCC
Q 024676 164 CTDSGGVRLWDARSGKIVQTL-ETKSPVTSAEVSRDGRYITTA-DG----------SSVKFWDANHFGLVKGYNMP-CNT 230 (264)
Q Consensus 164 ~~~d~~v~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~-~~----------~~i~iwd~~~~~~~~~~~~~-~~~ 230 (264)
++.++.|++||+++++..... .+...+..++|||||++|+.+ .+ +.|++||+.+++ +..+..+ ...
T Consensus 396 ~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~ 474 (1045)
T 1k32_A 396 ANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHD 474 (1045)
T ss_dssp EETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBE
T ss_pred ECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCccc
Confidence 567799999999999877666 445567899999999987653 22 389999999876 3333322 223
Q ss_pred ceeeEcCCCCCEEEEecCCCeEEEEEcCc
Q 024676 231 ESASLEPKLGNIFIAGGEDMWVHVFDFHT 259 (264)
Q Consensus 231 ~~~~~~~~~~~~~~~gs~d~~v~vwd~~~ 259 (264)
....|.+ +|++|+.++.++..++|+...
T Consensus 475 ~~~~~sp-dG~~l~~~s~~~~~~~~~~~~ 502 (1045)
T 1k32_A 475 YAPAFDA-DSKNLYYLSYRSLDPSPDRVV 502 (1045)
T ss_dssp EEEEECT-TSCEEEEEESCCCCCEECSSS
T ss_pred CCceEcC-CCCEEEEEecccCCcCcchhc
Confidence 4456777 588899999888888887543
No 158
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.83 E-value=8.4e-19 Score=160.48 Aligned_cols=239 Identities=9% Similarity=0.006 Sum_probs=162.1
Q ss_pred CCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCE-----EEEEECCCCcEEEEecCC---------
Q 024676 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAV-----WSCCLDANALFSASGSAD--------- 82 (264)
Q Consensus 17 ~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V-----~~v~~~~~~~~l~s~s~D--------- 82 (264)
.....+.|+| ||++|+++ |++|++|++.+++....+.+|.... ..++|+||+++++.++.+
T Consensus 17 ~~~~~~~w~~---dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~ 91 (740)
T 4a5s_A 17 LKLYSLRWIS---DHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYT 91 (740)
T ss_dssp CCCCCEEECS---SSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred ccccccEECC---CCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccc
Confidence 3456789996 89998886 9999999999999877788876432 347889999999988876
Q ss_pred CeEEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCe--------------
Q 024676 83 FTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSI-------------- 148 (264)
Q Consensus 83 ~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i-------------- 148 (264)
+.+.+||+.+++......+...+....|+|+++.|+.+ .|+.|++|++.+++............+
T Consensus 92 ~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~ 170 (740)
T 4a5s_A 92 ASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVF 170 (740)
T ss_dssp EEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTS
T ss_pred eEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhc
Confidence 45569999998765544566779999999999999887 568999999876653211111111111
Q ss_pred ---EEEEEecCCCeEEEEeeCCC-----------------------------------eEEEEECCC---Cc--eeEEec
Q 024676 149 ---RTVAWLHSDQTILSSCTDSG-----------------------------------GVRLWDARS---GK--IVQTLE 185 (264)
Q Consensus 149 ---~~~~~~~~~~~~~~~~~~d~-----------------------------------~v~iwd~~~---~~--~~~~~~ 185 (264)
..+.|+|++..++....+++ +|++||+.+ ++ ....+.
T Consensus 171 ~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~ 250 (740)
T 4a5s_A 171 SAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQIT 250 (740)
T ss_dssp SSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEEC
T ss_pred CCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEec
Confidence 34789998887666543332 588899988 73 122232
Q ss_pred -------CCCCEEEEEEcCCCcEEEEe--C---CCcEEEEECCCce----ee--eEE--ecCC-C-----CceeeEcCCC
Q 024676 186 -------TKSPVTSAEVSRDGRYITTA--D---GSSVKFWDANHFG----LV--KGY--NMPC-N-----TESASLEPKL 239 (264)
Q Consensus 186 -------~~~~v~~~~~s~~~~~l~~~--~---~~~i~iwd~~~~~----~~--~~~--~~~~-~-----~~~~~~~~~~ 239 (264)
+...+..++|+|||++++.. . +..|.+||+.+++ +. ..+ ..+. . .....|+|+
T Consensus 251 ~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspD- 329 (740)
T 4a5s_A 251 APASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLD- 329 (740)
T ss_dssp CCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTT-
T ss_pred CCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCC-
Confidence 33458899999999865432 1 2369999998776 22 111 1111 1 224567775
Q ss_pred CCEEE-EecC-C--CeEEEEEcCccee
Q 024676 240 GNIFI-AGGE-D--MWVHVFDFHTGEQ 262 (264)
Q Consensus 240 ~~~~~-~gs~-d--~~v~vwd~~~g~~ 262 (264)
|+.++ ..++ + ..|++||+++++.
T Consensus 330 G~~l~~~~s~~~G~~~l~~~~~~~~~~ 356 (740)
T 4a5s_A 330 GNSFYKIISNEEGYRHICYFQIDKKDC 356 (740)
T ss_dssp SSEEEEEEECTTSCEEEEEEETTCSSC
T ss_pred CCEEEEEEEcCCCceEEEEEECCCCce
Confidence 66555 5543 3 5678888876653
No 159
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.82 E-value=2.7e-18 Score=142.41 Aligned_cols=201 Identities=10% Similarity=0.041 Sum_probs=146.1
Q ss_pred CeeeeEeccCCCCCeEE-EEEeCCCCcEEEeCCCCceEEeeeCC------cCCEEEEEECCCCcEEEEecCC--------
Q 024676 18 PVVDLFYSPITPDGFFL-VSASKDSSPMLRNGETGDWIGTFEGH------KGAVWSCCLDANALFSASGSAD-------- 82 (264)
Q Consensus 18 ~v~~~~~~~~~~~g~~l-~t~s~d~~v~i~~~~~~~~~~~~~~H------~~~V~~v~~~~~~~~l~s~s~D-------- 82 (264)
.+..++|+| +|+++ +++..++.+.+||..+++.+..+..+ ...+..++|+|+++++++++.+
T Consensus 44 ~~~~~~~s~---dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 120 (349)
T 1jmx_B 44 GPGTAMMAP---DNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY 120 (349)
T ss_dssp SSCEEEECT---TSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCE
T ss_pred CCceeEECC---CCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEccccccccccc
Confidence 467888885 88755 56667899999999999887776632 2236789999999998888765
Q ss_pred ----CeEEEEeCCCCc---EEEEeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccC-----------
Q 024676 83 ----FTAKLWDALTGD---EKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNS----------- 144 (264)
Q Consensus 83 ----~~v~iwd~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~----------- 144 (264)
+.|.+||+.+++ .+..+.+...+..++|+|+++ +++++. .+.+||+.+++.........
T Consensus 121 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (349)
T 1jmx_B 121 VVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDV 197 (349)
T ss_dssp EECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBC
T ss_pred ccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccc
Confidence 899999998743 334455555688889999999 555543 49999987665321111110
Q ss_pred --------------------------------------------------------CCCeEEEEEec-CCCeEEEEeeCC
Q 024676 145 --------------------------------------------------------SGSIRTVAWLH-SDQTILSSCTDS 167 (264)
Q Consensus 145 --------------------------------------------------------~~~i~~~~~~~-~~~~~~~~~~~d 167 (264)
......++++| ++..++++ +
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~---~ 274 (349)
T 1jmx_B 198 LYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV---L 274 (349)
T ss_dssp CCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE---E
T ss_pred eeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE---c
Confidence 01233455567 66655544 5
Q ss_pred CeEEEEECCCCceeEEecCCCCEEEEEEcCCCcEEE-EeCCCcEEEEECCCceeeeEEecC
Q 024676 168 GGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYIT-TADGSSVKFWDANHFGLVKGYNMP 227 (264)
Q Consensus 168 ~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~~~i~iwd~~~~~~~~~~~~~ 227 (264)
+.|.+||+++++.+..+.....+..++++|++++|. ++.++.|++||.++++.+..+..+
T Consensus 275 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 275 NRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp SEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred CeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 899999999999887776655677899999987554 445789999999999988888765
No 160
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.81 E-value=7e-18 Score=142.31 Aligned_cols=246 Identities=15% Similarity=0.056 Sum_probs=163.0
Q ss_pred EeeccCCCeee-----eEeccCCCCCeEEEEEeC-CCC--cEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCC
Q 024676 11 VCHGHSRPVVD-----LFYSPITPDGFFLVSASK-DSS--PMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSAD 82 (264)
Q Consensus 11 ~~~~h~~~v~~-----~~~~~~~~~g~~l~t~s~-d~~--v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D 82 (264)
.+..|...... .+|+ |||++|+.++. ++. +.+|+..+++..+...+|...+..++|+||++.|+.++.+
T Consensus 25 ~lt~~~~~~~~~~~~~~~~S---pDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~ 101 (388)
T 3pe7_A 25 RLTPPDVTCHRNYFYQKCFT---RDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG 101 (388)
T ss_dssp ECSCTTSCEECCCTTSCCBC---TTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT
T ss_pred EecCCcccccchhhcCccCC---CCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC
Confidence 33455555544 5566 59999998887 674 6677998888777777777776677899999999999999
Q ss_pred CeEEEEeCCCCcEEEEeec-CCeEEEE--EECCCCCEEEEe----------------------eCCCcEEEeeCCCCCCC
Q 024676 83 FTAKLWDALTGDEKHSFEH-KHIVRAC--AFSEDTHLLLTG----------------------GFEKILRIFDLNRPDAP 137 (264)
Q Consensus 83 ~~v~iwd~~~~~~~~~~~~-~~~v~~~--~~~~~~~~l~s~----------------------~~d~~i~~~d~~~~~~~ 137 (264)
+.+++||+.+++....+.. ...+... .++|++++++.. ..+..|.+||+.+++.
T Consensus 102 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~- 180 (388)
T 3pe7_A 102 RNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES- 180 (388)
T ss_dssp TEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE-
T ss_pred CeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCce-
Confidence 9999999999887665543 3334333 348999888742 2446799999987653
Q ss_pred CeEeccCCCCeEEEEEec-CCCeEEEEeeC-----CCeEEEEECCCCceeEEecCC--CCEEEEEEcCCCcEEEE-eC--
Q 024676 138 PREVGNSSGSIRTVAWLH-SDQTILSSCTD-----SGGVRLWDARSGKIVQTLETK--SPVTSAEVSRDGRYITT-AD-- 206 (264)
Q Consensus 138 ~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~-----d~~v~iwd~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~-~~-- 206 (264)
..+..+...+..++|+| ++..++.+... ...|.++|+.+++........ ..+....|+|||+.|+. +.
T Consensus 181 -~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~ 259 (388)
T 3pe7_A 181 -TVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLK 259 (388)
T ss_dssp -EEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEET
T ss_pred -EEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCC
Confidence 33334456688899998 66655444332 237888888766543322332 24778899999985533 22
Q ss_pred CC---cEEEEECCCceeeeEEecCC------CCceeeEcCCCCCEEEEe---------cCCCeEEEEEcCccee
Q 024676 207 GS---SVKFWDANHFGLVKGYNMPC------NTESASLEPKLGNIFIAG---------GEDMWVHVFDFHTGEQ 262 (264)
Q Consensus 207 ~~---~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~g---------s~d~~v~vwd~~~g~~ 262 (264)
+. .|.+||+.+++.......+. ......+.|+ |+.++.. +.+..|++||+.+++.
T Consensus 260 ~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spd-g~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (388)
T 3pe7_A 260 GSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGD-GSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ 332 (388)
T ss_dssp TCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEE-ECCC------------CCCCEEEEEETTTTEE
T ss_pred CCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccC-CCcceeEeeeccccccCCCCEEEEEeccCCce
Confidence 22 39999998876432222221 1122346664 5545432 5677999999988764
No 161
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.81 E-value=1.7e-17 Score=138.08 Aligned_cols=206 Identities=10% Similarity=0.124 Sum_probs=142.9
Q ss_pred eccCCCeeeeEeccCCCCCeEEEEEe-CCCCcEEEeCC-CCc--eEEeeeC---------CcCCEEEEEECCCCcEEEEe
Q 024676 13 HGHSRPVVDLFYSPITPDGFFLVSAS-KDSSPMLRNGE-TGD--WIGTFEG---------HKGAVWSCCLDANALFSASG 79 (264)
Q Consensus 13 ~~h~~~v~~~~~~~~~~~g~~l~t~s-~d~~v~i~~~~-~~~--~~~~~~~---------H~~~V~~v~~~~~~~~l~s~ 79 (264)
.+|...+..|+|+| ||++|++++ .++.+.+|++. +++ .+..+.. +...+.+++|+|+++++++.
T Consensus 82 ~~~~~~p~~~a~sp---dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~ 158 (347)
T 3hfq_A 82 VAPGTPPAYVAVDE---ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVID 158 (347)
T ss_dssp EEESCCCSEEEEET---TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEE
T ss_pred ecCCCCCEEEEECC---CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEe
Confidence 45677788899996 899888887 67899999985 333 2333321 12348899999999977888
Q ss_pred cCCCeEEEEeCC-CCcEEEE--e--ecCCeEEEEEECCCCCEEEE-eeCCCcEEEeeCCC--CCCCC-eEeccCC-----
Q 024676 80 SADFTAKLWDAL-TGDEKHS--F--EHKHIVRACAFSEDTHLLLT-GGFEKILRIFDLNR--PDAPP-REVGNSS----- 145 (264)
Q Consensus 80 s~D~~v~iwd~~-~~~~~~~--~--~~~~~v~~~~~~~~~~~l~s-~~~d~~i~~~d~~~--~~~~~-~~~~~~~----- 145 (264)
..++.|++|++. ++..... + .....+..++|+|+++++++ ...++.+.+|+++. ++... .......
T Consensus 159 ~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~ 238 (347)
T 3hfq_A 159 LGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTA 238 (347)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCS
T ss_pred CCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCC
Confidence 889999999998 4543221 1 22335778999999996666 45678999999864 22111 1111111
Q ss_pred -CCeEEEEEecCCCeEEEEeeCCCeEEEEECCC-C--ceeEEecC-CCCEEEEEEcCCCcEEEE-eC-CCcEEEE--ECC
Q 024676 146 -GSIRTVAWLHSDQTILSSCTDSGGVRLWDARS-G--KIVQTLET-KSPVTSAEVSRDGRYITT-AD-GSSVKFW--DAN 216 (264)
Q Consensus 146 -~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~-~--~~~~~~~~-~~~v~~~~~s~~~~~l~~-~~-~~~i~iw--d~~ 216 (264)
.....++|+|++..++++...++.|.+||+.. + +.+..+.. ...+..++|+|+|++|+. .. ++.|.+| |..
T Consensus 239 ~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~ 318 (347)
T 3hfq_A 239 HNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLT 318 (347)
T ss_dssp CCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred CCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCC
Confidence 34777899998887877877789999999973 2 34444443 345788999999987654 43 4789999 555
Q ss_pred Cceee
Q 024676 217 HFGLV 221 (264)
Q Consensus 217 ~~~~~ 221 (264)
+++..
T Consensus 319 tg~l~ 323 (347)
T 3hfq_A 319 SGKLS 323 (347)
T ss_dssp TCCEE
T ss_pred CCeEE
Confidence 55543
No 162
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.81 E-value=9e-17 Score=133.21 Aligned_cols=237 Identities=8% Similarity=0.067 Sum_probs=177.1
Q ss_pred cCCCeeeeEeccCCCCCeEEEEEeCC------------------------CCcEEEeCCCCceEEeee-CCcCCEEEEEE
Q 024676 15 HSRPVVDLFYSPITPDGFFLVSASKD------------------------SSPMLRNGETGDWIGTFE-GHKGAVWSCCL 69 (264)
Q Consensus 15 h~~~v~~~~~~~~~~~g~~l~t~s~d------------------------~~v~i~~~~~~~~~~~~~-~H~~~V~~v~~ 69 (264)
-...+.+|+++| +|+++++.+.+ +.+.+||..+++.+..+. ++-.....+++
T Consensus 22 ~l~~v~~va~d~---~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~ 98 (329)
T 3fvz_A 22 LPGQVSGVALDS---KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSI 98 (329)
T ss_dssp CCSCEEEEEECT---TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEE
T ss_pred ecCCceEEEECC---CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEE
Confidence 356788999986 89998888887 468999999998877665 45567899999
Q ss_pred CCCCcEEEEecCCCeEEEEeCCCCc-EEEEee----------cCCeEEEEEECC-CCCEEEEee-CCCcEEEeeCCCCCC
Q 024676 70 DANALFSASGSADFTAKLWDALTGD-EKHSFE----------HKHIVRACAFSE-DTHLLLTGG-FEKILRIFDLNRPDA 136 (264)
Q Consensus 70 ~~~~~~l~s~s~D~~v~iwd~~~~~-~~~~~~----------~~~~v~~~~~~~-~~~~l~s~~-~d~~i~~~d~~~~~~ 136 (264)
++++.++++...++.|++||..... .+..+. +-.....++++| ++.++++.+ .++.|++|+.. +..
T Consensus 99 d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~-g~~ 177 (329)
T 3fvz_A 99 DTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS-GKF 177 (329)
T ss_dssp CTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT-SCE
T ss_pred CCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC-CCE
Confidence 9999988999999999999976542 344442 223578999999 788888776 58999999943 332
Q ss_pred CCeEecc----------CCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEecC---CCCEEEEEEcCCCcEEE
Q 024676 137 PPREVGN----------SSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLET---KSPVTSAEVSRDGRYIT 203 (264)
Q Consensus 137 ~~~~~~~----------~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~ 203 (264)
. ..+.. .-.....+++.++++.++++...++.|++||..+++.+..+.. ...+..++++| +..+.
T Consensus 178 ~-~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~ 255 (329)
T 3fvz_A 178 V-TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFA 255 (329)
T ss_dssp E-EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEE
T ss_pred E-EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEE
Confidence 2 22211 1123678888887678888888889999999998988877742 34688899999 43333
Q ss_pred Ee--------CCCcEEEEECCCceeeeEEec----CCCCceeeEcCCCCCEEEEecCCCeEEEEEcC
Q 024676 204 TA--------DGSSVKFWDANHFGLVKGYNM----PCNTESASLEPKLGNIFIAGGEDMWVHVFDFH 258 (264)
Q Consensus 204 ~~--------~~~~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~ 258 (264)
.. .+..|++||..+++.+..+.. -..+..+++.++ |.++++...++.|++|+.+
T Consensus 256 ~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~d-G~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 256 VNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASED-GTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTT-SEEEEEESSSCCEEEEEEE
T ss_pred eCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCC-CCEEEEECCCCEEEEEeCC
Confidence 22 234799999999998888742 123456677774 7899999999999999975
No 163
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.79 E-value=4.4e-17 Score=137.37 Aligned_cols=240 Identities=10% Similarity=0.017 Sum_probs=160.9
Q ss_pred eccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEE--ECCCCcEEEE------------
Q 024676 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCC--LDANALFSAS------------ 78 (264)
Q Consensus 13 ~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~--~~~~~~~l~s------------ 78 (264)
.+|...+..+.|+| ||++|+.++.++.+++||+.+++....+..+.+.+.... +++++.+++.
T Consensus 77 ~~~~~~~~~~~~sp---dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~ 153 (388)
T 3pe7_A 77 EGRGDNTFGGFLSP---DDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLT 153 (388)
T ss_dssp CSSCBCSSSCEECT---TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC
T ss_pred eCCCCCccceEEcC---CCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCccccccc
Confidence 45555665678885 999999999999999999999987666666666664444 4899988763
Q ss_pred ----------ecCCCeEEEEeCCCCcEEEEeecCCeEEEEEECC-CCCEEEEeeCC------CcEEEeeCCCCCCCCeEe
Q 024676 79 ----------GSADFTAKLWDALTGDEKHSFEHKHIVRACAFSE-DTHLLLTGGFE------KILRIFDLNRPDAPPREV 141 (264)
Q Consensus 79 ----------~s~D~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d------~~i~~~d~~~~~~~~~~~ 141 (264)
.+.+..|.+||+.+++......+...+..+.|+| +++.|+.+..+ ..+.++|+..+.. ..+
T Consensus 154 ~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~--~~l 231 (388)
T 3pe7_A 154 DWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM--RKV 231 (388)
T ss_dssp SHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC--EES
T ss_pred ccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce--EEe
Confidence 2345789999999998777767777889999999 99988876653 3677778764432 233
Q ss_pred ccCC--CCeEEEEEecCCCeEEEEeeCCC----eEEEEECCCCceeEEecCCCC------EEEEEEcCCCcEEEE-----
Q 024676 142 GNSS--GSIRTVAWLHSDQTILSSCTDSG----GVRLWDARSGKIVQTLETKSP------VTSAEVSRDGRYITT----- 204 (264)
Q Consensus 142 ~~~~--~~i~~~~~~~~~~~~~~~~~~d~----~v~iwd~~~~~~~~~~~~~~~------v~~~~~s~~~~~l~~----- 204 (264)
.... ..+...+|+|++..++..+..++ .|.+||+++++.......... .....|+|||+.++.
T Consensus 232 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 311 (388)
T 3pe7_A 232 KTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDD 311 (388)
T ss_dssp CCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC-------
T ss_pred eeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeec
Confidence 2222 24667889998887755444322 399999999875332221110 111368999976653
Q ss_pred -----eCCCcEEEEECCCceeeeEEecCC-----------CCceeeEcCCCCCEEE-EecCCCeEEEEEcC
Q 024676 205 -----ADGSSVKFWDANHFGLVKGYNMPC-----------NTESASLEPKLGNIFI-AGGEDMWVHVFDFH 258 (264)
Q Consensus 205 -----~~~~~i~iwd~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~-~gs~d~~v~vwd~~ 258 (264)
..+..|.+||+.+++......... ......+.|+ |+.|+ ++..++...+|.++
T Consensus 312 ~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spD-g~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 312 SGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPD-DKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp -----CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTT-SSEEEEEECTTSSCEEEEEE
T ss_pred cccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCC-CCEEEEEecCCCceeEEEEE
Confidence 224589999998876533222222 2345677775 65555 55567777777544
No 164
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.78 E-value=1.6e-17 Score=147.96 Aligned_cols=226 Identities=15% Similarity=0.066 Sum_probs=153.0
Q ss_pred ccC-CCeeeeEeccCCCCCeEEEEEeC---CCCcEEEeCCC---CceEEeeeCCcCCEEEEEECCCC--cEEEEecCCCe
Q 024676 14 GHS-RPVVDLFYSPITPDGFFLVSASK---DSSPMLRNGET---GDWIGTFEGHKGAVWSCCLDANA--LFSASGSADFT 84 (264)
Q Consensus 14 ~h~-~~v~~~~~~~~~~~g~~l~t~s~---d~~v~i~~~~~---~~~~~~~~~H~~~V~~v~~~~~~--~~l~s~s~D~~ 84 (264)
.|. ..+..+.|+| | +.+++++. +...++|.... +... .+..+. .+...+|+|++ ..+++++.|+.
T Consensus 61 ~~~~~~~~~~~~sp---d-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~ 134 (582)
T 3o4h_A 61 REPINSVLDPHYGV---G-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRV 134 (582)
T ss_dssp SSCCSEECEECTTC---S-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCE
T ss_pred cccccccccccCCC---C-eEEEEeccCCCCcceEEEEEeccCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCc
Confidence 444 5888999985 7 78887776 45556654432 3322 332221 22244666655 45677777765
Q ss_pred EEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEEeeCC----CcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeE
Q 024676 85 AKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFE----KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTI 160 (264)
Q Consensus 85 v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 160 (264)
. +||+.+++......+.. ..+.|+|+++.+++++.+ ..|++||+.+++. ..+..+.+.+...+|+|++..+
T Consensus 135 ~-l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~--~~l~~~~~~~~~~~~SpDG~~l 209 (582)
T 3o4h_A 135 A-LYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL--RVFDSGEGSFSSASISPGMKVT 209 (582)
T ss_dssp E-EEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC--EEECCSSCEEEEEEECTTSCEE
T ss_pred e-EEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc--eEeecCCCccccceECCCCCEE
Confidence 5 99999887666555444 788999999999988877 7899999987654 3555667788999999988766
Q ss_pred EEEeeCCC--eEEEEECCCCceeEEecC-CCCEEEEE--------EcCCCcEEEE-eCCCcEEEEECCCceeeeEEecCC
Q 024676 161 LSSCTDSG--GVRLWDARSGKIVQTLET-KSPVTSAE--------VSRDGRYITT-ADGSSVKFWDANHFGLVKGYNMPC 228 (264)
Q Consensus 161 ~~~~~~d~--~v~iwd~~~~~~~~~~~~-~~~v~~~~--------~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~~~~~ 228 (264)
+ ++..++ .|.+||+++++.. .+.. ...+..+. |+|||.++++ ..++.+++|++ ++..... ..
T Consensus 210 ~-~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~~~--~~ 283 (582)
T 3o4h_A 210 A-GLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVEAP--QG 283 (582)
T ss_dssp E-EEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEECCC--SS
T ss_pred E-EccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeeccC--CC
Confidence 6 666677 8999999999877 4433 23344455 9999976655 45789999999 5544311 12
Q ss_pred CCceeeEcCCCCCEEEEecCCCe---EEEEEcC
Q 024676 229 NTESASLEPKLGNIFIAGGEDMW---VHVFDFH 258 (264)
Q Consensus 229 ~~~~~~~~~~~~~~~~~gs~d~~---v~vwd~~ 258 (264)
.....++. +++++++++.+.. +++||..
T Consensus 284 ~v~~~~~s--dg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 284 NHGRVVLW--RGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp EEEEEEEE--TTEEEEEEEETTEEEEEEEETTC
T ss_pred ceEEEEec--CCEEEEEEcCCCCCCeEEEEcCC
Confidence 22345555 5788888877744 6666654
No 165
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.77 E-value=8.5e-16 Score=128.56 Aligned_cols=226 Identities=11% Similarity=0.059 Sum_probs=147.2
Q ss_pred CCeEEEEEeC----CCCcEEEe--CCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCC----CeEEEEeCCC--CcE--
Q 024676 30 DGFFLVSASK----DSSPMLRN--GETGDWIGTFEGHKGAVWSCCLDANALFSASGSAD----FTAKLWDALT--GDE-- 95 (264)
Q Consensus 30 ~g~~l~t~s~----d~~v~i~~--~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D----~~v~iwd~~~--~~~-- 95 (264)
...+++.|+. ++.+.+|. ..++++......|......++|+||++++++++.+ +.+.+|++.. +..
T Consensus 12 ~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~ 91 (361)
T 3scy_A 12 SELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHL 91 (361)
T ss_dssp GEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEE
T ss_pred CceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEE
Confidence 3456666644 56788875 46676432221266677889999999999888875 7999998765 432
Q ss_pred EEEee-cCCeEEEEEECCCCCEEEEee-CCCcEEEeeCCCCCCCC---eEecc----------CCCCeEEEEEecCCCeE
Q 024676 96 KHSFE-HKHIVRACAFSEDTHLLLTGG-FEKILRIFDLNRPDAPP---REVGN----------SSGSIRTVAWLHSDQTI 160 (264)
Q Consensus 96 ~~~~~-~~~~v~~~~~~~~~~~l~s~~-~d~~i~~~d~~~~~~~~---~~~~~----------~~~~i~~~~~~~~~~~~ 160 (264)
+.... +......+++ ++++|++++ .++.+.+|++....... ..... ....+..++|+|++..+
T Consensus 92 ~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l 169 (361)
T 3scy_A 92 LNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYL 169 (361)
T ss_dssp EEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEE
T ss_pred eeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEE
Confidence 22222 3345666666 777777776 57899999986432211 11100 12234778999988878
Q ss_pred EEEeeCCCeEEEEECCCCc-------e-------eEEecCCCCEEEEEEcCCCcEEE-Ee-CCCcEEEEECCCcee--ee
Q 024676 161 LSSCTDSGGVRLWDARSGK-------I-------VQTLETKSPVTSAEVSRDGRYIT-TA-DGSSVKFWDANHFGL--VK 222 (264)
Q Consensus 161 ~~~~~~d~~v~iwd~~~~~-------~-------~~~~~~~~~v~~~~~s~~~~~l~-~~-~~~~i~iwd~~~~~~--~~ 222 (264)
++++..++.|++|++.... . .........+..++|+|+|+++. +. .++.|.+||+.+++. +.
T Consensus 170 ~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~ 249 (361)
T 3scy_A 170 LADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQ 249 (361)
T ss_dssp EEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEE
T ss_pred EEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeE
Confidence 8777777899999887543 1 22233445678999999998664 44 368999999986643 33
Q ss_pred EEec-C---CCCceeeEcCCCCCEEEE-ecC-CCeEEEEEcC
Q 024676 223 GYNM-P---CNTESASLEPKLGNIFIA-GGE-DMWVHVFDFH 258 (264)
Q Consensus 223 ~~~~-~---~~~~~~~~~~~~~~~~~~-gs~-d~~v~vwd~~ 258 (264)
.+.. + ..+..+.++|+ +++|++ ... ++.|.+|+++
T Consensus 250 ~~~~~~~~~~~~~~i~~spd-g~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 250 TVAADTVNAQGSGDIHLSPD-GKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEESCSSCCCCEEEEEECTT-SSEEEEEECSSSCEEEEEEEC
T ss_pred EEecCCCCCCCcccEEECCC-CCEEEEECCCCCCEEEEEEEc
Confidence 3322 1 11336677775 776655 444 5899999985
No 166
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.77 E-value=1.5e-15 Score=123.66 Aligned_cols=239 Identities=10% Similarity=0.023 Sum_probs=168.9
Q ss_pred EeeccCCCeeeeEeccCCCCCe-EEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEe
Q 024676 11 VCHGHSRPVVDLFYSPITPDGF-FLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (264)
Q Consensus 11 ~~~~h~~~v~~~~~~~~~~~g~-~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd 89 (264)
++..+.....+++|+| +|+ .++++..++.+..|+..++ ...+..+...+.++++++++.++++...++.|.+||
T Consensus 22 ~l~~~~~~~eg~~~d~---~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 22 RLADGFTWTEGPVYVP---ARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp EEECCCSSEEEEEEEG---GGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEEC
T ss_pred EEecCCccccCCeEeC---CCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEc
Confidence 3445666677899996 787 7888899999999999877 567777888899999999999888888889999999
Q ss_pred CCCCcEEEEeec-----CCeEEEEEECCCCCEEEE----eeC-------------CCcEEEeeCCCCCCCCeEeccCCCC
Q 024676 90 ALTGDEKHSFEH-----KHIVRACAFSEDTHLLLT----GGF-------------EKILRIFDLNRPDAPPREVGNSSGS 147 (264)
Q Consensus 90 ~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~s----~~~-------------d~~i~~~d~~~~~~~~~~~~~~~~~ 147 (264)
..+++....... ...++.++++|+++++++ ++. .+.+..++.. ++ ..........
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~--~~~~~~~~~~ 173 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT--LSAPIRDRVK 173 (296)
T ss_dssp STTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC--EEEEECCCSS
T ss_pred CCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC--EEEeecCCCC
Confidence 988775443321 123567899999998887 331 2345555543 22 2233334456
Q ss_pred eEEEEEecCCCeEEEEeeCCCeEEEEECC-CCce---eEEec-CCCCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeee
Q 024676 148 IRTVAWLHSDQTILSSCTDSGGVRLWDAR-SGKI---VQTLE-TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVK 222 (264)
Q Consensus 148 i~~~~~~~~~~~~~~~~~~d~~v~iwd~~-~~~~---~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~ 222 (264)
...++|.+++..+ ++...++.|.+||+. +++. ...+. ....+..++++++|+++++. ++.|.+||.. ++.+.
T Consensus 174 ~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~-g~~~~ 250 (296)
T 3e5z_A 174 PNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD-GDELG 250 (296)
T ss_dssp EEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT-SCEEE
T ss_pred CccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC-CCEEE
Confidence 6889998887766 777777899999997 5554 22331 22345678999999987777 7899999986 66777
Q ss_pred EEecCCCCceeeEcCCCCCEEEEecCCCeEEEEEcCcce
Q 024676 223 GYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~ 261 (264)
.+..+..+....+..++++.|+.++.++ +.-++.++.+
T Consensus 251 ~~~~~~~~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~ 288 (296)
T 3e5z_A 251 RVLTPQTTSNLCFGGPEGRTLYMTVSTE-FWSIETNVRG 288 (296)
T ss_dssp EEECSSCCCEEEEESTTSCEEEEEETTE-EEEEECSCCB
T ss_pred EEECCCCceeEEEECCCCCEEEEEcCCe-EEEEEccccc
Confidence 7777655666677544566677776664 4445555543
No 167
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.76 E-value=2.6e-16 Score=132.17 Aligned_cols=228 Identities=11% Similarity=0.070 Sum_probs=151.5
Q ss_pred CCCeEEEEEe------CCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEec----------CCCeEEEEeCCC
Q 024676 29 PDGFFLVSAS------KDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGS----------ADFTAKLWDALT 92 (264)
Q Consensus 29 ~~g~~l~t~s------~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s----------~D~~v~iwd~~~ 92 (264)
++++++.... .|+.+.+||..+++.+.++..+..+ .++|+||+++++.++ .+++|.+||..+
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t 90 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK 90 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence 4666666653 4778999999999998888877666 799999999987765 367899999999
Q ss_pred CcEEEEeec-------CCeEEEEEECCCCCEEEEeeC--CCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEE
Q 024676 93 GDEKHSFEH-------KHIVRACAFSEDTHLLLTGGF--EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (264)
Q Consensus 93 ~~~~~~~~~-------~~~v~~~~~~~~~~~l~s~~~--d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 163 (264)
++.+..+.. ......++++|++++|+++.. ++.|.+||+.+.+.....+. .. ....+...|.+...+++
T Consensus 91 ~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~-~~-~~~~v~~~p~~~~~~~~ 168 (361)
T 2oiz_A 91 LTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTA-AA-GCWSVIPQPNRPRSFMT 168 (361)
T ss_dssp CCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGG-GT-TEEEEEECTTSSSEEEE
T ss_pred CcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEec-CC-CcceeEEcCCCCeeEEE
Confidence 887777652 234567889999999998874 58899999987643211011 11 11112223333222223
Q ss_pred eeCCCe------------------------------------------------EEEEECCCCce--eEEecCC------
Q 024676 164 CTDSGG------------------------------------------------VRLWDARSGKI--VQTLETK------ 187 (264)
Q Consensus 164 ~~~d~~------------------------------------------------v~iwd~~~~~~--~~~~~~~------ 187 (264)
.+.||. |.++|+...+. ...+...
T Consensus 169 ~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~ 248 (361)
T 2oiz_A 169 ICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKA 248 (361)
T ss_dssp EETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHH
T ss_pred ECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccc
Confidence 333344 44444433221 1111100
Q ss_pred -----CCEEEEEEcCCCcEE-EEeC-----------CCcEEEEECCCceeeeEEecCCCCceeeEcCCCCCEEEEecCCC
Q 024676 188 -----SPVTSAEVSRDGRYI-TTAD-----------GSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDM 250 (264)
Q Consensus 188 -----~~v~~~~~s~~~~~l-~~~~-----------~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~ 250 (264)
....-++++|++..+ ++.. +..|.+||+.+++.+..+..+. +..+.++|+ ++++++++. +
T Consensus 249 ~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spd-g~~l~v~n~-~ 325 (361)
T 2oiz_A 249 KNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQ-RNLMLTLDG-G 325 (361)
T ss_dssp TTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETT-TTEEEEECS-S
T ss_pred cccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCC-CCEEEEeCC-C
Confidence 001126789997654 3322 2479999999999999998877 888888885 777777776 9
Q ss_pred eEEEEEcCcc--eee
Q 024676 251 WVHVFDFHTG--EQI 263 (264)
Q Consensus 251 ~v~vwd~~~g--~~i 263 (264)
.|.+||..++ +.+
T Consensus 326 ~v~v~D~~t~~l~~~ 340 (361)
T 2oiz_A 326 NVNVYDISQPEPKLL 340 (361)
T ss_dssp CEEEEECSSSSCEEE
T ss_pred eEEEEECCCCcceee
Confidence 9999999999 764
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.75 E-value=1.5e-16 Score=143.49 Aligned_cols=238 Identities=11% Similarity=-0.007 Sum_probs=151.4
Q ss_pred eeEeccCCCCCeE-EEEEeC-CCCcEEEeCC--C-CceEEeeeC-----CcCCEEEEEECCCCcEEEEecCC--------
Q 024676 21 DLFYSPITPDGFF-LVSASK-DSSPMLRNGE--T-GDWIGTFEG-----HKGAVWSCCLDANALFSASGSAD-------- 82 (264)
Q Consensus 21 ~~~~~~~~~~g~~-l~t~s~-d~~v~i~~~~--~-~~~~~~~~~-----H~~~V~~v~~~~~~~~l~s~s~D-------- 82 (264)
...|+ .+|||++ |+.++. +..+.+++.. . ++ ...+.. |...+..++|+||++.|++++.|
T Consensus 81 ~~~~~-~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~ 158 (662)
T 3azo_A 81 PWAGV-PRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSD 158 (662)
T ss_dssp CEEEE-CCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTC
T ss_pred cceee-eecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCC
Confidence 44454 1358988 665554 4455555655 2 43 344544 67788999999999999988877
Q ss_pred --CeEEEEeCCC------CcEEEEe-ecCCeEEEEEECCCCCEEEEeeCCC--------cEEEeeCC-CCC--CCCeEec
Q 024676 83 --FTAKLWDALT------GDEKHSF-EHKHIVRACAFSEDTHLLLTGGFEK--------ILRIFDLN-RPD--APPREVG 142 (264)
Q Consensus 83 --~~v~iwd~~~------~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~--------~i~~~d~~-~~~--~~~~~~~ 142 (264)
..|++||+.+ +...... .+...+..+.|+|+++.|+.++.++ .|.+||+. ++. .......
T Consensus 159 ~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~ 238 (662)
T 3azo_A 159 VRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG 238 (662)
T ss_dssp EEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE
T ss_pred ceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC
Confidence 5899999988 6554444 4556788899999999999877553 79999997 341 1112223
Q ss_pred cCCCCeEEEEEecCCCeEEEEeeCCC--eEEEEECCCCceeEEecCCCC---------EEEEEEcCCCcEEEEeCCCcEE
Q 024676 143 NSSGSIRTVAWLHSDQTILSSCTDSG--GVRLWDARSGKIVQTLETKSP---------VTSAEVSRDGRYITTADGSSVK 211 (264)
Q Consensus 143 ~~~~~i~~~~~~~~~~~~~~~~~~d~--~v~iwd~~~~~~~~~~~~~~~---------v~~~~~s~~~~~l~~~~~~~i~ 211 (264)
.+...+..++|+|++. +++++..++ .|.+||+.+++.......+.. +..++++|++++++++..+.++
T Consensus 239 ~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (662)
T 3azo_A 239 GPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAV 317 (662)
T ss_dssp ETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCE
T ss_pred CCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccE
Confidence 3456788899999887 666666667 677777777765443332211 4568899999887654337888
Q ss_pred EE--ECCCceeeeEEecCCCCceeeEcCCCCCE-EEEecCCCe--EEEEEcCccee
Q 024676 212 FW--DANHFGLVKGYNMPCNTESASLEPKLGNI-FIAGGEDMW--VHVFDFHTGEQ 262 (264)
Q Consensus 212 iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gs~d~~--v~vwd~~~g~~ 262 (264)
|| |+..++ ++.+..+.......+.++.+.+ +++++.+.. |++||+.+|+.
T Consensus 318 l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~ 372 (662)
T 3azo_A 318 LGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRA 372 (662)
T ss_dssp EEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCce
Confidence 88 655554 4444443322221113333333 444555554 55556666653
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.75 E-value=3.5e-16 Score=141.10 Aligned_cols=243 Identities=11% Similarity=-0.026 Sum_probs=162.7
Q ss_pred eeccCCCeeeeEeccCCCCCeEEEEE--eCCCCcEEEeCCCCceEEeeeCCcCCEE---------EEEEC--CCCcE-EE
Q 024676 12 CHGHSRPVVDLFYSPITPDGFFLVSA--SKDSSPMLRNGETGDWIGTFEGHKGAVW---------SCCLD--ANALF-SA 77 (264)
Q Consensus 12 ~~~h~~~v~~~~~~~~~~~g~~l~t~--s~d~~v~i~~~~~~~~~~~~~~H~~~V~---------~v~~~--~~~~~-l~ 77 (264)
+.+|...+..++|++ ++.+++.. +.++...+|....+...+.+..|...+. ...|+ ||+++ ++
T Consensus 19 ~~~~~~~~~~~~~s~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la 95 (662)
T 3azo_A 19 VASRSGRPACVGAVG---DEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLV 95 (662)
T ss_dssp HHHTCSCCEEEEEET---TEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEE
T ss_pred HhhcCCccceeEEcC---CeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEE
Confidence 357999999999995 77777777 5678888998544444556666666655 55565 89987 66
Q ss_pred Eec-CCCeEEEEeCC--C-CcEEEEee-----cCCeEEEEEECCCCCEEEEeeCC----------CcEEEeeCCC-----
Q 024676 78 SGS-ADFTAKLWDAL--T-GDEKHSFE-----HKHIVRACAFSEDTHLLLTGGFE----------KILRIFDLNR----- 133 (264)
Q Consensus 78 s~s-~D~~v~iwd~~--~-~~~~~~~~-----~~~~v~~~~~~~~~~~l~s~~~d----------~~i~~~d~~~----- 133 (264)
.++ .+..|.+|++. + +....... +...+..++|+|+++.|++++.+ ..|++||+.+
T Consensus 96 ~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 96 FTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp EEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTC
T ss_pred EEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcccc
Confidence 544 35667777766 3 44333323 45568899999999999988877 5799999976
Q ss_pred -CCCCCeEec-cCCCCeEEEEEecCCCeEEEEeeCC-------CeEEEEECC-CC---ceeEEecC-CCCEEEEEEcCCC
Q 024676 134 -PDAPPREVG-NSSGSIRTVAWLHSDQTILSSCTDS-------GGVRLWDAR-SG---KIVQTLET-KSPVTSAEVSRDG 199 (264)
Q Consensus 134 -~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~d-------~~v~iwd~~-~~---~~~~~~~~-~~~v~~~~~s~~~ 199 (264)
++ ...+. .....+..++|+|++..++.+..+. ..|.+||+. ++ +....... ...+..+.|+|||
T Consensus 176 ~~~--~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg 253 (662)
T 3azo_A 176 RSA--VRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDG 253 (662)
T ss_dssp GGG--SEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTS
T ss_pred CCc--eeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCC
Confidence 33 23333 3344566778999888776555442 479999999 57 43333333 4578899999999
Q ss_pred cEEEEeC-CC--cEEEEECCCceeeeEEecCCC---------CceeeEcCCCCCEEEEecCCCeEEEE--EcCcce
Q 024676 200 RYITTAD-GS--SVKFWDANHFGLVKGYNMPCN---------TESASLEPKLGNIFIAGGEDMWVHVF--DFHTGE 261 (264)
Q Consensus 200 ~~l~~~~-~~--~i~iwd~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~gs~d~~v~vw--d~~~g~ 261 (264)
+++++++ ++ .|.+||+.+++.......... .....+.+ +++++++++. +.+++| |+.+++
T Consensus 254 ~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~-~~~~~~~~~~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 254 SLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLA-NGLIAVVHGK-GAAVLGILDPESGE 327 (662)
T ss_dssp CEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECT-TSCEEEEEBS-SSCEEEEEETTTTE
T ss_pred eEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeC-CCEEEEEEEc-CccEEEEEECCCCc
Confidence 9665554 55 566677655554322222111 12345555 5888999988 999999 655554
No 170
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.75 E-value=3.8e-14 Score=117.11 Aligned_cols=231 Identities=10% Similarity=0.044 Sum_probs=159.4
Q ss_pred eeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCC----CeEEE
Q 024676 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSAD----FTAKL 87 (264)
Q Consensus 12 ~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D----~~v~i 87 (264)
+.++...+.+++|+| +|++++++..++.|.+|+..+++....+..+...+.++++++++.++++...+ +.|.+
T Consensus 40 ~~~~~~~~~~~~~~~---~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~ 116 (333)
T 2dg1_A 40 ISKKGLQLEGLNFDR---QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA 116 (333)
T ss_dssp EESSCCCEEEEEECT---TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred EeccCccccCcEECC---CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEE
Confidence 345666778899985 88888888999999999999888665554567789999999999888877766 68999
Q ss_pred EeCCCCcEEEEee---cCCeEEEEEECCCCCEEEEeeC------CCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCC
Q 024676 88 WDALTGDEKHSFE---HKHIVRACAFSEDTHLLLTGGF------EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQ 158 (264)
Q Consensus 88 wd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~------d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 158 (264)
||..++.....+. ....++.+.++|+++++++... .+.+..++..+++. ............+++.+++.
T Consensus 117 ~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~i~~~~dg~ 194 (333)
T 2dg1_A 117 ATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV--TPIIQNISVANGIALSTDEK 194 (333)
T ss_dssp ECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCE--EEEEEEESSEEEEEECTTSS
T ss_pred EeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEE--EEeecCCCcccceEECCCCC
Confidence 9988876543332 3456889999999988876653 24455555543322 22212223467788888777
Q ss_pred eEEEEeeCCCeEEEEECCC-CceeEE--------ecCCCCEEEEEEcCCCcEEEEe-CCCcEEEEECCCceeeeEEecCC
Q 024676 159 TILSSCTDSGGVRLWDARS-GKIVQT--------LETKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPC 228 (264)
Q Consensus 159 ~~~~~~~~d~~v~iwd~~~-~~~~~~--------~~~~~~v~~~~~s~~~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~~ 228 (264)
.++++...++.|.+||+++ ++.+.. +.....+..++++++|+++++. .++.|.+||. +++.+..+..+.
T Consensus 195 ~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~ 273 (333)
T 2dg1_A 195 VLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPG 273 (333)
T ss_dssp EEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTT
T ss_pred EEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCC
Confidence 6766666668999999964 332211 1222357889999999877664 4678999998 466667776553
Q ss_pred -------CCceeeEcCCCCCEEEEecCC
Q 024676 229 -------NTESASLEPKLGNIFIAGGED 249 (264)
Q Consensus 229 -------~~~~~~~~~~~~~~~~~gs~d 249 (264)
.+..+++.++ +..|+.++.+
T Consensus 274 ~~~g~~~~~~~~~~~~d-g~~L~v~~~~ 300 (333)
T 2dg1_A 274 RDEGHMLRSTHPQFIPG-TNQLIICSND 300 (333)
T ss_dssp GGGTCSCBCCEEEECTT-SCEEEEEEEC
T ss_pred CccccccCcceEEECCC-CCEEEEEeCc
Confidence 3556677664 5444433333
No 171
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.74 E-value=9e-17 Score=135.54 Aligned_cols=237 Identities=13% Similarity=0.050 Sum_probs=152.6
Q ss_pred eeeeEeccCCCCCeEEEEEeCC-C--CcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcE
Q 024676 19 VVDLFYSPITPDGFFLVSASKD-S--SPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDE 95 (264)
Q Consensus 19 v~~~~~~~~~~~g~~l~t~s~d-~--~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~ 95 (264)
+..++|+| ||++|+..+.. + .+.+|+..+++......++......+.|+||+++|+.++.++.+.+||+.+++.
T Consensus 38 ~~~~~~Sp---dG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 38 FYQKCFTQ---DGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEE 114 (396)
T ss_dssp TTSCCBCT---TSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred eecCcCCC---CCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCc
Confidence 66677775 99988776543 3 567778888876544443333333377999999999999899999999998876
Q ss_pred EEEee-cCCeEEE-------------------EEECCCCCEEEEe-----eCCCcEEEeeCCCCCCCCeEeccCCCCeEE
Q 024676 96 KHSFE-HKHIVRA-------------------CAFSEDTHLLLTG-----GFEKILRIFDLNRPDAPPREVGNSSGSIRT 150 (264)
Q Consensus 96 ~~~~~-~~~~v~~-------------------~~~~~~~~~l~s~-----~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~ 150 (264)
..... +...... +.++|+++.++.. ..+..|.+||+.+++. .........+..
T Consensus 115 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~--~~~~~~~~~~~~ 192 (396)
T 3c5m_A 115 QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGEL--EVIHQDTAWLGH 192 (396)
T ss_dssp EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCE--EEEEEESSCEEE
T ss_pred EEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcE--EeeccCCccccc
Confidence 55554 2222222 3457777766544 3566799999987653 222234556788
Q ss_pred EEEec-CCCeEEEEeeCC-----CeEEEEECCCCceeEEecC--CCCEEEEEEcCCCcEEEE-eCC-----CcEEEEECC
Q 024676 151 VAWLH-SDQTILSSCTDS-----GGVRLWDARSGKIVQTLET--KSPVTSAEVSRDGRYITT-ADG-----SSVKFWDAN 216 (264)
Q Consensus 151 ~~~~~-~~~~~~~~~~~d-----~~v~iwd~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~-~~~-----~~i~iwd~~ 216 (264)
+.|+| ++..++...... ..|.+||+.+++....... ...+..+.|+|+|++|+. +.+ +.|.+||+.
T Consensus 193 ~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 272 (396)
T 3c5m_A 193 PIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPE 272 (396)
T ss_dssp EEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTT
T ss_pred ceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECC
Confidence 89998 455444433221 3688899877654332232 124778899999986543 221 339999998
Q ss_pred CceeeeEEecCCCCceeeEcCCCCCEEEEec----------------CCCeEEEEEcCccee
Q 024676 217 HFGLVKGYNMPCNTESASLEPKLGNIFIAGG----------------EDMWVHVFDFHTGEQ 262 (264)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs----------------~d~~v~vwd~~~g~~ 262 (264)
+++.......+. . ...+.+.+++++++++ .+..|++||+.+++.
T Consensus 273 ~g~~~~l~~~~~-~-~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 273 TLENEEVMVMPP-C-SHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp TCCEEEEEECCS-E-EEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC
T ss_pred CCCeEEeeeCCC-C-CCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce
Confidence 876443332222 1 2566663477777654 347899999987753
No 172
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.74 E-value=2.3e-15 Score=137.15 Aligned_cols=243 Identities=9% Similarity=-0.045 Sum_probs=162.2
Q ss_pred ccCCCeeeeEeccCCCCCeEEEEEeCCC-----CcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCe----
Q 024676 14 GHSRPVVDLFYSPITPDGFFLVSASKDS-----SPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFT---- 84 (264)
Q Consensus 14 ~h~~~v~~~~~~~~~~~g~~l~t~s~d~-----~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~---- 84 (264)
+|+..+..+.|+| ||++||.++.++ .+++||+.+++.+.....+ ..+..++|+||++.|+.++.|+.
T Consensus 122 ~~~~~~~~~~~SP---Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~ 197 (710)
T 2xdw_A 122 DGTVALRGYAFSE---DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKS 197 (710)
T ss_dssp TSCEEEEEEEECT---TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCC
T ss_pred CCCEEEEEEEECC---CCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccc
Confidence 3545677888885 999998776544 7999999999876532222 23567899999999988887766
Q ss_pred ------------EEEEeCCCCcE--EEEee---cCCeEEEEEECCCCCEEEEeeC-----CCcEEEeeCCC------CCC
Q 024676 85 ------------AKLWDALTGDE--KHSFE---HKHIVRACAFSEDTHLLLTGGF-----EKILRIFDLNR------PDA 136 (264)
Q Consensus 85 ------------v~iwd~~~~~~--~~~~~---~~~~v~~~~~~~~~~~l~s~~~-----d~~i~~~d~~~------~~~ 136 (264)
|++|++.++.. ...+. +...+..+.|+|++++|+.++. +..+.+||+.+ +..
T Consensus 198 ~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 277 (710)
T 2xdw_A 198 DGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL 277 (710)
T ss_dssp SSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC
T ss_pred cccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc
Confidence 99999988752 22332 3445788999999999887764 57899999876 432
Q ss_pred CCeEeccCCCCeEEEEEecCCCeEEEEeeCC---CeEEEEECCCCce--eEE-ecCCC--CEEEEEEcCCCcEEEEe-CC
Q 024676 137 PPREVGNSSGSIRTVAWLHSDQTILSSCTDS---GGVRLWDARSGKI--VQT-LETKS--PVTSAEVSRDGRYITTA-DG 207 (264)
Q Consensus 137 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d---~~v~iwd~~~~~~--~~~-~~~~~--~v~~~~~s~~~~~l~~~-~~ 207 (264)
....+..+...... .|.+++..+++....+ ..|.+||+.+++. ... +.+.. .+..+.+++++.++++. .+
T Consensus 278 ~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~ 356 (710)
T 2xdw_A 278 KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHD 356 (710)
T ss_dssp CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEET
T ss_pred ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEEC
Confidence 33444444444443 4677777776665433 3699999988742 222 33322 57788898777766554 45
Q ss_pred C--cEEEEECCCceeeeEEecCCCC-ceeeEcCCCCCEEEEec---CCCeEEEEEcCcce
Q 024676 208 S--SVKFWDANHFGLVKGYNMPCNT-ESASLEPKLGNIFIAGG---EDMWVHVFDFHTGE 261 (264)
Q Consensus 208 ~--~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gs---~d~~v~vwd~~~g~ 261 (264)
+ .|.+||+.+++.++.+..+... ..+.+.++...++++.+ ..+.++.||+.+|+
T Consensus 357 g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 357 VKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 5 4777888777766666655222 23344554334444433 35789999998876
No 173
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.74 E-value=1.6e-15 Score=125.78 Aligned_cols=233 Identities=7% Similarity=0.005 Sum_probs=165.1
Q ss_pred eeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEEE
Q 024676 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHS 98 (264)
Q Consensus 19 v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~ 98 (264)
...+.+. +++..++...++.+.++|..+++.++++.. ......+++++++...++...++.|.+||..+++....
T Consensus 46 ~~~i~~~----~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~ 120 (328)
T 3dsm_A 46 AQSMVIR----DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGY 120 (328)
T ss_dssp EEEEEEE----TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEE
T ss_pred ceEEEEE----CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEE
Confidence 4456664 466667777789999999999999888863 35678899988886666665899999999999887776
Q ss_pred eecCC------eEEEEEECCCCCEEEEee--CCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCC---
Q 024676 99 FEHKH------IVRACAFSEDTHLLLTGG--FEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS--- 167 (264)
Q Consensus 99 ~~~~~------~v~~~~~~~~~~~l~s~~--~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d--- 167 (264)
++... ....+++ . ++.++.+. .++.|.++|+.+++...... .......+++.+++ .+++++..+
T Consensus 121 i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~--~g~~p~~i~~~~dG-~l~v~~~~~~~~ 195 (328)
T 3dsm_A 121 IECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELT--IGIQPTSLVMDKYN-KMWTITDGGYEG 195 (328)
T ss_dssp EECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEE--CSSCBCCCEECTTS-EEEEEBCCBCTT
T ss_pred EEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEE--cCCCccceEEcCCC-CEEEEECCCccC
Confidence 65443 4455666 3 44555554 48899999998765432222 12233456666655 456555543
Q ss_pred -------CeEEEEECCCCceeEEecC--CCCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeeeEEec---CCCCceeeE
Q 024676 168 -------GGVRLWDARSGKIVQTLET--KSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNM---PCNTESASL 235 (264)
Q Consensus 168 -------~~v~iwd~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~---~~~~~~~~~ 235 (264)
+.|.++|.++++....+.. ......++++|+++++..++. .|.+||..+++....... ...+..+++
T Consensus 196 ~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-~v~~~d~~t~~~~~~~~~~~~~~~p~gi~v 274 (328)
T 3dsm_A 196 SPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-DIWRMPVEADRVPVRPFLEFRDTKYYGLTV 274 (328)
T ss_dssp CSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-SEEEEETTCSSCCSSCSBCCCSSCEEEEEE
T ss_pred CccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-EEEEEECCCCceeeeeeecCCCCceEEEEE
Confidence 7899999999988766653 346889999999887766554 899999988765321111 133455677
Q ss_pred cCCCCCEEEEe----cCCCeEEEEEcCcceee
Q 024676 236 EPKLGNIFIAG----GEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 236 ~~~~~~~~~~g----s~d~~v~vwd~~~g~~i 263 (264)
.|..+.++++. ..++.|.+||.+ |+.+
T Consensus 275 dp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~ 305 (328)
T 3dsm_A 275 NPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLI 305 (328)
T ss_dssp CTTTCCEEEEECTTSSSEEEEEEECTT-CCEE
T ss_pred cCCCCeEEEEcccccccCCEEEEECCC-CCEE
Confidence 77678888888 789999999987 7754
No 174
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.74 E-value=8.4e-18 Score=153.16 Aligned_cols=232 Identities=10% Similarity=0.061 Sum_probs=153.0
Q ss_pred CeeeeEeccCCCCCeEEEEEeC---------CCCcEEEeCCCCceE--EeeeCCcCCEEEEEECCCCcEEEEecCCCeEE
Q 024676 18 PVVDLFYSPITPDGFFLVSASK---------DSSPMLRNGETGDWI--GTFEGHKGAVWSCCLDANALFSASGSADFTAK 86 (264)
Q Consensus 18 ~v~~~~~~~~~~~g~~l~t~s~---------d~~v~i~~~~~~~~~--~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~ 86 (264)
.+..++|+| ||++|+.++. |+.+++||+.+++.+ ..+ ...+..++|+|||++++.++ |+.|+
T Consensus 61 ~~~~~~~Sp---Dg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~ 133 (719)
T 1z68_A 61 NASNYGLSP---DRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIY 133 (719)
T ss_dssp TCSEEEECT---TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEE
T ss_pred ceeeEEECC---CCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEE
Confidence 388999996 9999999887 789999999988763 223 24688899999999998875 78999
Q ss_pred EEeCCCCcEEEEee--cCCeE-----------------EEEEECCCCCEEEEeeCCC-----------------------
Q 024676 87 LWDALTGDEKHSFE--HKHIV-----------------RACAFSEDTHLLLTGGFEK----------------------- 124 (264)
Q Consensus 87 iwd~~~~~~~~~~~--~~~~v-----------------~~~~~~~~~~~l~s~~~d~----------------------- 124 (264)
+||+.++....... +...+ ..++|+|+++.|++++.|.
T Consensus 134 ~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 213 (719)
T 1z68_A 134 LKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIP 213 (719)
T ss_dssp EESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEE
T ss_pred EEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeec
Confidence 99998887544321 22222 4799999999999987652
Q ss_pred -----------cEEEeeCCCCCCC----C---eEeccCCCCeEEEEEecCCCeEEEEeeCC----CeEEEEE----CCCC
Q 024676 125 -----------ILRIFDLNRPDAP----P---REVGNSSGSIRTVAWLHSDQTILSSCTDS----GGVRLWD----ARSG 178 (264)
Q Consensus 125 -----------~i~~~d~~~~~~~----~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~d----~~v~iwd----~~~~ 178 (264)
.+++||+.+++.. . ..+..+...+..++|+|++ .++++..+. ..|.+|| +.++
T Consensus 214 yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~-~~~~~~~~~~~~~~~l~~~d~~~~~~~g 292 (719)
T 1z68_A 214 YPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDE-RVCLQWLKRVQNVSVLSICDFREDWQTW 292 (719)
T ss_dssp CCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSS-EEEEEEEESSTTEEEEEEEEECSSSSSE
T ss_pred CCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCC-eEEEEEeccccCeEEEEEEcccCCCCCC
Confidence 7889998765421 0 0112355678899999984 555553322 2488899 8887
Q ss_pred ceeEEe-----cCCCCEE-----EEEEcCCCcEEE--Ee-CCC--cEEEEECCCceeeeEEecC-CCCceeeEcCCCCCE
Q 024676 179 KIVQTL-----ETKSPVT-----SAEVSRDGRYIT--TA-DGS--SVKFWDANHFGLVKGYNMP-CNTESASLEPKLGNI 242 (264)
Q Consensus 179 ~~~~~~-----~~~~~v~-----~~~~s~~~~~l~--~~-~~~--~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 242 (264)
++...+ .+...+. .+.|+|||+.++ ++ .++ .|.+||+.+.+ .+.+... .......+. +.+.+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i 370 (719)
T 1z68_A 293 DCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSL 370 (719)
T ss_dssp ECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEE
T ss_pred ceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEE
Confidence 754333 1223344 678999997432 33 344 57778887655 2333222 122233334 43444
Q ss_pred EEEecC----CCeEEEEEcCc
Q 024676 243 FIAGGE----DMWVHVFDFHT 259 (264)
Q Consensus 243 ~~~gs~----d~~v~vwd~~~ 259 (264)
++++.. ++..++|.+..
T Consensus 371 ~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 371 FYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp EEEESCGGGCTTCBEEEEEEC
T ss_pred EEEEecCCCCCceEEEEEEeC
Confidence 445544 47889997653
No 175
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.73 E-value=1.6e-15 Score=127.47 Aligned_cols=218 Identities=11% Similarity=0.082 Sum_probs=147.1
Q ss_pred ccCCCeeeeEeccCCCCCeEEEEEe----------CCCCcEEEeCCCCceEEeeeCC------cCCEEEEEECCCCcEEE
Q 024676 14 GHSRPVVDLFYSPITPDGFFLVSAS----------KDSSPMLRNGETGDWIGTFEGH------KGAVWSCCLDANALFSA 77 (264)
Q Consensus 14 ~h~~~v~~~~~~~~~~~g~~l~t~s----------~d~~v~i~~~~~~~~~~~~~~H------~~~V~~v~~~~~~~~l~ 77 (264)
.+..+ .++|+| ||++|++++ .++.|.+||..+++.++++... ......++++||+++++
T Consensus 49 ~g~~p--~i~~sp---dg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~ 123 (361)
T 2oiz_A 49 TAFNG--HVQVSN---DGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIV 123 (361)
T ss_dssp CCEEE--EEEECT---TSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEE
T ss_pred CCCCC--ceEECC---CCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEE
Confidence 44455 788885 999998886 3677999999999888877532 23456789999999998
Q ss_pred EecC--CCeEEEEeCCCCcEEEE-eecCCeEEEEEECCCC-CEEEEeeCCCcEEEeeCCC--------------------
Q 024676 78 SGSA--DFTAKLWDALTGDEKHS-FEHKHIVRACAFSEDT-HLLLTGGFEKILRIFDLNR-------------------- 133 (264)
Q Consensus 78 s~s~--D~~v~iwd~~~~~~~~~-~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~~~d~~~-------------------- 133 (264)
+++. +++|.+||+.+++.+.. +..... ..+.+.|++ ..+++.+.|+.+.+|+++.
T Consensus 124 v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~ 202 (361)
T 2oiz_A 124 LQNASPATSIGIVDVAKGDYVEDVTAAAGC-WSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDP 202 (361)
T ss_dssp EEEESSSEEEEEEETTTTEEEEEEGGGTTE-EEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSC
T ss_pred EECCCCCCeEEEEECCCCcEEEEEecCCCc-ceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCc
Confidence 7763 68999999999987777 554332 113334433 3444445555555544422
Q ss_pred ----------------------------CCCCCeE-ec--c----C----CCCeEEEEEecCCCeEEEEee---------
Q 024676 134 ----------------------------PDAPPRE-VG--N----S----SGSIRTVAWLHSDQTILSSCT--------- 165 (264)
Q Consensus 134 ----------------------------~~~~~~~-~~--~----~----~~~i~~~~~~~~~~~~~~~~~--------- 165 (264)
....... .. . . ......+++.+++..++++..
T Consensus 203 ~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~ 282 (361)
T 2oiz_A 203 IFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHK 282 (361)
T ss_dssp BCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTT
T ss_pred eEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCccccc
Confidence 1100000 00 0 0 000011466776677666554
Q ss_pred -CCCeEEEEECCCCceeEEecCCCCEEEEEEcCCCcEEEEeCCCcEEEEECCCc--eeeeEE-ecCCCCceeeEcCC
Q 024676 166 -DSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTADGSSVKFWDANHF--GLVKGY-NMPCNTESASLEPK 238 (264)
Q Consensus 166 -~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~--~~~~~~-~~~~~~~~~~~~~~ 238 (264)
..++|.+||+++++.+..+.... +..++++|+|+++.++.++.|.+||..++ +.++.+ .....+..+.+.|+
T Consensus 283 ~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~ 358 (361)
T 2oiz_A 283 FPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPV 358 (361)
T ss_dssp CCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECSSCEEEEECSSSSCEEEEEETTSCSSEEEEEECCC
T ss_pred CCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCCCeEEEEECCCCcceeeEEeccCCCCcEEEEecCC
Confidence 13489999999999999887766 88999999999887665689999999999 988886 45556666777774
No 176
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.72 E-value=1.2e-15 Score=128.68 Aligned_cols=234 Identities=9% Similarity=0.007 Sum_probs=152.4
Q ss_pred eeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEE-------------------EEECCCCcEEEEe--
Q 024676 21 DLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWS-------------------CCLDANALFSASG-- 79 (264)
Q Consensus 21 ~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~-------------------v~~~~~~~~l~s~-- 79 (264)
.+.|+| ||++|+.++.++.+.+|+..+++....+..+.+.... +.|+|++..++..
T Consensus 85 ~~~~sp---dg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 161 (396)
T 3c5m_A 85 GGFIST---DERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEF 161 (396)
T ss_dssp TCEECT---TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHH
T ss_pred cceECC---CCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeee
Confidence 367775 9999999999999999999988766555555443322 3456777665443
Q ss_pred ---cCCCeEEEEeCCCCcEEEEeecCCeEEEEEECC-CCCEEEEeeCC------CcEEEeeCCCCCCCCeEeccC--CCC
Q 024676 80 ---SADFTAKLWDALTGDEKHSFEHKHIVRACAFSE-DTHLLLTGGFE------KILRIFDLNRPDAPPREVGNS--SGS 147 (264)
Q Consensus 80 ---s~D~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d------~~i~~~d~~~~~~~~~~~~~~--~~~ 147 (264)
..+..|.+||+.+++......+...+..+.|+| +++.++..+.+ ..|.+||+..+.. ..+..+ ...
T Consensus 162 ~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~--~~l~~~~~~~~ 239 (396)
T 3c5m_A 162 YHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV--RKIKEHAEGES 239 (396)
T ss_dssp HHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC--EESSCCCTTEE
T ss_pred ccCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce--eEeeccCCCcc
Confidence 456789999999988766667777889999999 78767665543 3588888765432 222222 224
Q ss_pred eEEEEEecCCCeEEEEeeCC----CeEEEEECCCCceeEEecCCCCEEEEEEcC-CCcEEEEe-----------------
Q 024676 148 IRTVAWLHSDQTILSSCTDS----GGVRLWDARSGKIVQTLETKSPVTSAEVSR-DGRYITTA----------------- 205 (264)
Q Consensus 148 i~~~~~~~~~~~~~~~~~~d----~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~----------------- 205 (264)
+..++|+|++..++.+...+ +.|.+||+++++........ ... ..|+| +|++++.+
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~ 317 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIE 317 (396)
T ss_dssp EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC-SEE-EEEECSSSSEEEEEECCC----------CCC
T ss_pred ccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC-CCC-CCccCCCCceEEEecCCcceeeccccccccC
Confidence 67788998887766554432 34999999988754433222 233 88999 99877653
Q ss_pred CCCcEEEEECCCceeeeEEecCC-----------CCceeeEcCCCCCEEEEec-CCCeEEEE--EcCccee
Q 024676 206 DGSSVKFWDANHFGLVKGYNMPC-----------NTESASLEPKLGNIFIAGG-EDMWVHVF--DFHTGEQ 262 (264)
Q Consensus 206 ~~~~i~iwd~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~gs-~d~~v~vw--d~~~g~~ 262 (264)
.+..|.+||+.+++......... ......+.++ ++.|+..+ .++...+| ++.++++
T Consensus 318 ~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~~~s~~~~~~~l~~~~~~~~~~ 387 (396)
T 3c5m_A 318 NDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPN-DDGVLFTSDFEGVPAIYIADVPESYK 387 (396)
T ss_dssp CCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTT-SSEEEEEECTTSSCEEEEEECCTTCC
T ss_pred CCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccC-CCeEEEEecCCCCceEEEEEEccccc
Confidence 23679999998776432222222 1234567774 66666544 45554454 5555543
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.72 E-value=5.1e-15 Score=122.37 Aligned_cols=237 Identities=14% Similarity=0.044 Sum_probs=162.4
Q ss_pred CCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEE
Q 024676 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEK 96 (264)
Q Consensus 17 ~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~ 96 (264)
..|..+.|+| ++..++..+.++.++.| .++....+..+...+.+++|++++.+++++..++.|.+||..+++..
T Consensus 6 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~ 79 (333)
T 2dg1_A 6 QDLPTLFYSG---KSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIK 79 (333)
T ss_dssp CCCCBCCSCG---GGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE
T ss_pred cccceeeecC---CccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEE
Confidence 3477888886 55666777888899999 35556677777778899999999998888889999999999888765
Q ss_pred EEe-ecCCeEEEEEECCCCCEEEEeeCC----CcEEEeeCCCCCCCCeEe-ccCCCCeEEEEEecCCCeEEEEeeC----
Q 024676 97 HSF-EHKHIVRACAFSEDTHLLLTGGFE----KILRIFDLNRPDAPPREV-GNSSGSIRTVAWLHSDQTILSSCTD---- 166 (264)
Q Consensus 97 ~~~-~~~~~v~~~~~~~~~~~l~s~~~d----~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~---- 166 (264)
... .+...+..++++|+++++++...+ +.|.+||.+++....... ......+..+++.+++. ++++...
T Consensus 80 ~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~ 158 (333)
T 2dg1_A 80 RPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYST 158 (333)
T ss_dssp EEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC-EEEEECCCBTT
T ss_pred EEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC-EEEEecccccc
Confidence 544 456679999999999988877666 689999987654321111 12234678888887664 4444432
Q ss_pred --CCeEEEEECCCCceeEEecCCCCEEEEEEcCCCcEE-EEe-CCCcEEEEECCC-ceeeeEE------ecC--CCCcee
Q 024676 167 --SGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYI-TTA-DGSSVKFWDANH-FGLVKGY------NMP--CNTESA 233 (264)
Q Consensus 167 --d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~-~~~~i~iwd~~~-~~~~~~~------~~~--~~~~~~ 233 (264)
.+.|..+|..+++..........++.++++|+++.+ ++. .++.|.+||+.+ +..+..+ ... ..+..+
T Consensus 159 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i 238 (333)
T 2dg1_A 159 NPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSC 238 (333)
T ss_dssp BCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEE
T ss_pred CCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCce
Confidence 246777777665544333333457889999999754 443 357899999863 2222211 111 123345
Q ss_pred eEcCCCCCEEEEecCCCeEEEEEcCccee
Q 024676 234 SLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (264)
Q Consensus 234 ~~~~~~~~~~~~gs~d~~v~vwd~~~g~~ 262 (264)
.+.+ .+.++++...++.|++||. +|+.
T Consensus 239 ~~d~-~G~l~v~~~~~~~v~~~d~-~g~~ 265 (333)
T 2dg1_A 239 CIDS-DDNLYVAMYGQGRVLVFNK-RGYP 265 (333)
T ss_dssp EEBT-TCCEEEEEETTTEEEEECT-TSCE
T ss_pred EECC-CCCEEEEEcCCCEEEEECC-CCCE
Confidence 6666 4788888878899999997 4543
No 178
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.71 E-value=3.8e-15 Score=125.12 Aligned_cols=226 Identities=12% Similarity=0.146 Sum_probs=145.2
Q ss_pred EEEEEeCC--CCcEEE--eCCCCceE--Eeee-CCcCCEEEEEECCCCcEEEEecCCCeEEEEeCC-CCcEEEEeecC--
Q 024676 33 FLVSASKD--SSPMLR--NGETGDWI--GTFE-GHKGAVWSCCLDANALFSASGSADFTAKLWDAL-TGDEKHSFEHK-- 102 (264)
Q Consensus 33 ~l~t~s~d--~~v~i~--~~~~~~~~--~~~~-~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~-~~~~~~~~~~~-- 102 (264)
+|+.|+.. +.|.+| |..++++. .... ++...+..++|+|+++++++++.+ .|.+|++. +++......+.
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~ 82 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG 82 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC
Confidence 35556553 456665 45566542 2221 233467789999999999888888 99999987 67654433321
Q ss_pred CeEEEEEECCCCCE--EEEee-------------CCCcEEEeeCCC-CCCCCeEec----cCCCCeEEEEEecCCCeEEE
Q 024676 103 HIVRACAFSEDTHL--LLTGG-------------FEKILRIFDLNR-PDAPPREVG----NSSGSIRTVAWLHSDQTILS 162 (264)
Q Consensus 103 ~~v~~~~~~~~~~~--l~s~~-------------~d~~i~~~d~~~-~~~~~~~~~----~~~~~i~~~~~~~~~~~~~~ 162 (264)
..+..++++|+++. ++++. .++.+.+|+++. ++.. .... .+...+..++|+|++..+++
T Consensus 83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~spdG~~l~~ 161 (365)
T 1jof_A 83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLE-KNVQNYEYQENTGIHGMVFDPTETYLYS 161 (365)
T ss_dssp SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEE-EEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCc-ceEeeEEeCCCCcceEEEECCCCCEEEE
Confidence 22445789999984 45553 689999999863 3322 1111 23456888999998877666
Q ss_pred EeeCCCeEEEEECC-CCcee--EEec---CCCCEEEEEEcCCCcEEEE-eC-CCcEEEEECC--Cceee---eEEe-cCC
Q 024676 163 SCTDSGGVRLWDAR-SGKIV--QTLE---TKSPVTSAEVSRDGRYITT-AD-GSSVKFWDAN--HFGLV---KGYN-MPC 228 (264)
Q Consensus 163 ~~~~d~~v~iwd~~-~~~~~--~~~~---~~~~v~~~~~s~~~~~l~~-~~-~~~i~iwd~~--~~~~~---~~~~-~~~ 228 (264)
+...++.|++||+. +++.. ..+. +...+..++|+|+|+++.. .. ++.|.+|++. +++.. ..+. .+.
T Consensus 162 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~ 241 (365)
T 1jof_A 162 ADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPP 241 (365)
T ss_dssp EETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCT
T ss_pred EcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCC
Confidence 65556799999998 77643 2333 2456889999999987654 43 5789999764 44432 2222 111
Q ss_pred -------------CCceee-EcCCCCCEEEEecCC-C-----eEEEEEcC-cce
Q 024676 229 -------------NTESAS-LEPKLGNIFIAGGED-M-----WVHVFDFH-TGE 261 (264)
Q Consensus 229 -------------~~~~~~-~~~~~~~~~~~gs~d-~-----~v~vwd~~-~g~ 261 (264)
.+..+. ++| +|++|++++.+ . .|++|+++ +|+
T Consensus 242 ~~~g~~~~~~~~~~~~~i~~~sp-dG~~l~v~~~~~~~~~~~~i~v~~~~~~g~ 294 (365)
T 1jof_A 242 GIPDRDPETGKGLYRADVCALTF-SGKYMFASSRANKFELQGYIAGFKLRDCGS 294 (365)
T ss_dssp TCCCBCTTTSSBSEEEEEEEECT-TSSEEEEEEEESSTTSCCEEEEEEECTTSC
T ss_pred CcCCcccccccccccccEEEECC-CCCEEEEECCCCCCCCCCeEEEEEECCCCC
Confidence 134566 677 47766655432 2 89999986 554
No 179
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.71 E-value=1.6e-14 Score=116.82 Aligned_cols=210 Identities=12% Similarity=0.079 Sum_probs=154.2
Q ss_pred CCeEEEEEeCCCCcEEEeCCCCceEEeeeCCc-CCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEEEeecC--CeEE
Q 024676 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGHK-GAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHK--HIVR 106 (264)
Q Consensus 30 ~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~-~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~--~~v~ 106 (264)
.++.|++++.|+.|.+||.++|+.+-++..+. ..+++++++|++.++++ .++.|+.||. +++.+..+... ..+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 46899999999999999999999988888775 47889999999998883 4778999998 88888888743 4788
Q ss_pred EEEECCCCCEEEEeeC-CCcEEEeeCCCCCCCCeEecc-----CCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCce
Q 024676 107 ACAFSEDTHLLLTGGF-EKILRIFDLNRPDAPPREVGN-----SSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI 180 (264)
Q Consensus 107 ~~~~~~~~~~l~s~~~-d~~i~~~d~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~ 180 (264)
.+.+.|+++++++.+. ++.+..+|. +++........ +......++..+++ .++++...++.|..||.+ |+.
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G-~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKG-NYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTS-CEEEEETTTTEEEEECTT-SCE
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCC-CEEEEecCCCEEEEECCC-CCE
Confidence 8999999999998876 666666664 34332222111 11122233445544 566677788999999998 999
Q ss_pred eEEecCCCCEEEEEEcCCCcEEEEeC-CCcEEEEECCCceeeeEEecCC----C---CceeeEcCCCCCEEEEe
Q 024676 181 VQTLETKSPVTSAEVSRDGRYITTAD-GSSVKFWDANHFGLVKGYNMPC----N---TESASLEPKLGNIFIAG 246 (264)
Q Consensus 181 ~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~g 246 (264)
+..+.....+.++...++|.+++++. ++.|..+|..+++.+-.+.... . +......+ .|.++++.
T Consensus 158 ~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~-~G~i~v~~ 230 (276)
T 3no2_A 158 LNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQ-NGGLYICN 230 (276)
T ss_dssp EEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECT-TSCEEEEE
T ss_pred EEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcC-CCCEEEEe
Confidence 98887666666788899998877654 5689999999899887775321 1 22333445 47777776
No 180
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.70 E-value=9.5e-14 Score=122.91 Aligned_cols=229 Identities=14% Similarity=0.136 Sum_probs=171.1
Q ss_pred CCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCC--CCcEEEEeecCCeEEE
Q 024676 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL--TGDEKHSFEHKHIVRA 107 (264)
Q Consensus 30 ~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~--~~~~~~~~~~~~~v~~ 107 (264)
.+.++++...++.+.++|..+++.+.++... ..++.+.|+||++++++++.|+.|.+||+. +++.+..+........
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ 244 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARS 244 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCce
Confidence 5677888889999999999999998888643 356789999999999999999999999996 7777777776667789
Q ss_pred EEEC----CCCCEEEEeeC-CCcEEEeeCCCCCCCCeEecc----------CCCCeEEEEEecCCCeEEEEeeCCCeEEE
Q 024676 108 CAFS----EDTHLLLTGGF-EKILRIFDLNRPDAPPREVGN----------SSGSIRTVAWLHSDQTILSSCTDSGGVRL 172 (264)
Q Consensus 108 ~~~~----~~~~~l~s~~~-d~~i~~~d~~~~~~~~~~~~~----------~~~~i~~~~~~~~~~~~~~~~~~d~~v~i 172 (264)
+.++ |++++++++.. ++.+.++|..+.+........ ....+..+..++.+..+++...+.|+|.+
T Consensus 245 ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~ 324 (567)
T 1qks_A 245 IETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL 324 (567)
T ss_dssp EEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred eEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEE
Confidence 9999 69999988765 599999998776543222110 01245667777777777777778899999
Q ss_pred EECCCCcee--EEecCCCCEEEEEEcCCCcEEEE-e-CCCcEEEEECCCceeeeEEec-CCCC---ceee-EcCCCCCEE
Q 024676 173 WDARSGKIV--QTLETKSPVTSAEVSRDGRYITT-A-DGSSVKFWDANHFGLVKGYNM-PCNT---ESAS-LEPKLGNIF 243 (264)
Q Consensus 173 wd~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~-~-~~~~i~iwd~~~~~~~~~~~~-~~~~---~~~~-~~~~~~~~~ 243 (264)
+|..+.+.+ ..+..........|+|+|+++.. . .++.|.++|+.+++.+..... ...+ .-.. +.|+++..+
T Consensus 325 vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~ 404 (567)
T 1qks_A 325 VDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVW 404 (567)
T ss_dssp EETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEE
T ss_pred EecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEE
Confidence 999876432 33444455778899999987644 3 357899999999998877776 3222 1223 355556666
Q ss_pred EEec-CCCeEEEEEcCc
Q 024676 244 IAGG-EDMWVHVFDFHT 259 (264)
Q Consensus 244 ~~gs-~d~~v~vwd~~~ 259 (264)
+++. .++.|.++|.++
T Consensus 405 ~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 405 ATSHMGDDSVALIGTDP 421 (567)
T ss_dssp EEEBSSSSEEEEEECCT
T ss_pred EeCCCCCCeEEEecCCC
Confidence 6654 468999999877
No 181
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.70 E-value=9.3e-15 Score=121.09 Aligned_cols=218 Identities=13% Similarity=0.048 Sum_probs=156.5
Q ss_pred CCCCcEEEeCCCCceEEeee----C--CcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEEEeecCCeEEEEEECC
Q 024676 39 KDSSPMLRNGETGDWIGTFE----G--HKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSE 112 (264)
Q Consensus 39 ~d~~v~i~~~~~~~~~~~~~----~--H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~ 112 (264)
.++++.++|..+++..+.+. + .......+++.. ++..++...++.|.+||..+++.+..+........+++++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~ 93 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLS 93 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeC
Confidence 38899999999998766541 1 223457777754 4455666778999999999999888887666788899988
Q ss_pred CCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCC----CCeEEEEEecCCCeEEEEee-CCCeEEEEECCCCceeEEecCC
Q 024676 113 DTHLLLTGGFEKILRIFDLNRPDAPPREVGNSS----GSIRTVAWLHSDQTILSSCT-DSGGVRLWDARSGKIVQTLETK 187 (264)
Q Consensus 113 ~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~-~d~~v~iwd~~~~~~~~~~~~~ 187 (264)
++++.++...++.|.+||..+.+.......... .....+++ +++.++++.. .++.|.++|+++++.+..+...
T Consensus 94 ~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g 171 (328)
T 3dsm_A 94 DEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG 171 (328)
T ss_dssp TTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS
T ss_pred CCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC
Confidence 885555444899999999987653322211110 03344555 3566666654 3789999999999988877665
Q ss_pred CCEEEEEEcCCCcEEEEeCC-----------CcEEEEECCCceeeeEEecC--CCCceeeEcCCCCCEEEEecCCCeEEE
Q 024676 188 SPVTSAEVSRDGRYITTADG-----------SSVKFWDANHFGLVKGYNMP--CNTESASLEPKLGNIFIAGGEDMWVHV 254 (264)
Q Consensus 188 ~~v~~~~~s~~~~~l~~~~~-----------~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~gs~d~~v~v 254 (264)
.....+.++|+|++++++.+ +.|.++|..+++.++.+..+ ..+..+++.++ ++.+..+.. .|.+
T Consensus 172 ~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d-~~~lyv~~~--~v~~ 248 (328)
T 3dsm_A 172 IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGT-RDTLYWINN--DIWR 248 (328)
T ss_dssp SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTT-SCEEEEESS--SEEE
T ss_pred CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecC-CCEEEEEcc--EEEE
Confidence 55678899999988776543 58999999999888888764 35677888875 454444433 7999
Q ss_pred EEcCccee
Q 024676 255 FDFHTGEQ 262 (264)
Q Consensus 255 wd~~~g~~ 262 (264)
||..+++.
T Consensus 249 ~d~~t~~~ 256 (328)
T 3dsm_A 249 MPVEADRV 256 (328)
T ss_dssp EETTCSSC
T ss_pred EECCCCce
Confidence 99988764
No 182
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.69 E-value=2.6e-14 Score=115.60 Aligned_cols=197 Identities=12% Similarity=0.215 Sum_probs=142.4
Q ss_pred ccCCCeeeeEeccCCCCCeEEEEEeC-CCCcEEEeCCCCceEEeee-CCcCCEEEEEECCCCcEEEEecCCCeEEEEeCC
Q 024676 14 GHSRPVVDLFYSPITPDGFFLVSASK-DSSPMLRNGETGDWIGTFE-GHKGAVWSCCLDANALFSASGSADFTAKLWDAL 91 (264)
Q Consensus 14 ~h~~~v~~~~~~~~~~~g~~l~t~s~-d~~v~i~~~~~~~~~~~~~-~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~ 91 (264)
+|...+.+|++.+ ++|+++++... ++.|.+|+ .+++.+..+. .+...+..+++++++.++++...++.|.+||..
T Consensus 74 ~~~~~p~~i~~~~--~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 150 (286)
T 1q7f_A 74 SQLLYPNRVAVVR--NSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN 150 (286)
T ss_dssp TCBSSEEEEEEET--TTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred ccccCceEEEEEc--CCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC
Confidence 3556778888843 47777777643 88999999 5677776664 345678999999999988888889999999954
Q ss_pred CCcEEEEee---cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccC--CCCeEEEEEecCCCeEEEEeeC
Q 024676 92 TGDEKHSFE---HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNS--SGSIRTVAWLHSDQTILSSCTD 166 (264)
Q Consensus 92 ~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~ 166 (264)
+.....+. +...+..++++|+++++++...++.|++||... +. ...+... ......+++.+++ .++++...
T Consensus 151 -g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~-~~~~~~~g~~~~p~~i~~d~~G-~l~v~~~~ 226 (286)
T 1q7f_A 151 -GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG-QY-LRQIGGEGITNYPIGVGINSNG-EILIADNH 226 (286)
T ss_dssp -SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC-CE-EEEESCTTTSCSEEEEEECTTC-CEEEEECS
T ss_pred -CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC-CE-EEEEccCCccCCCcEEEECCCC-CEEEEeCC
Confidence 55555553 334688999999999888777889999999743 22 2222222 2457788887765 56666665
Q ss_pred CC-eEEEEECCCCceeEEecCC---CCEEEEEEcCCCcEEEEeCCCcEEEEECCCc
Q 024676 167 SG-GVRLWDARSGKIVQTLETK---SPVTSAEVSRDGRYITTADGSSVKFWDANHF 218 (264)
Q Consensus 167 d~-~v~iwd~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~ 218 (264)
++ .|.+||. +++.+..+... ..+..++++|+|+++++..++.|++|+....
T Consensus 227 ~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 227 NNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQL 281 (286)
T ss_dssp SSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSCC
T ss_pred CCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEcccc
Confidence 55 9999995 45555555322 2377899999998887777889999997543
No 183
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.68 E-value=7e-15 Score=133.65 Aligned_cols=238 Identities=11% Similarity=-0.039 Sum_probs=153.6
Q ss_pred ccCCCeeeeEeccCCCCCeEEE-----EEeCCCCcEEEeCCCCceEEeeeCCcCCE--EEEEECCCCcEEEEecCCCe--
Q 024676 14 GHSRPVVDLFYSPITPDGFFLV-----SASKDSSPMLRNGETGDWIGTFEGHKGAV--WSCCLDANALFSASGSADFT-- 84 (264)
Q Consensus 14 ~h~~~v~~~~~~~~~~~g~~l~-----t~s~d~~v~i~~~~~~~~~~~~~~H~~~V--~~v~~~~~~~~l~s~s~D~~-- 84 (264)
+|+..+..++|+| ||++|| .|+.+..|++||+.+++.+. ..+...+ ..++|+||++.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SP---DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~ 192 (695)
T 2bkl_A 118 DGTVSLGTWAVSW---DGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPS 192 (695)
T ss_dssp SSCEEEEEEEECT---TSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTT
T ss_pred CCCEEEEEEEECC---CCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCC
Confidence 5666788899985 999998 55556789999999998641 1122222 57899999999998888876
Q ss_pred -----------EEEEeCCCCcE--EEEee---cCCeEEEEEECCCCCEEEEeeCCC----cEEEeeCCCCCCCCeEeccC
Q 024676 85 -----------AKLWDALTGDE--KHSFE---HKHIVRACAFSEDTHLLLTGGFEK----ILRIFDLNRPDAPPREVGNS 144 (264)
Q Consensus 85 -----------v~iwd~~~~~~--~~~~~---~~~~v~~~~~~~~~~~l~s~~~d~----~i~~~d~~~~~~~~~~~~~~ 144 (264)
|++|++.++.. ...+. +...+..+.|+|++++|+.++.++ .+.+++..+++ ...+..+
T Consensus 193 ~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~--~~~l~~~ 270 (695)
T 2bkl_A 193 IKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD--FRLLVKG 270 (695)
T ss_dssp SCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS--CEEEEEC
T ss_pred CccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc--eEEeecC
Confidence 99999988762 23332 335688999999999998877665 56667654433 3333333
Q ss_pred CCCeEEEEEecCCCeEEEEee---CCCeEEEEECCCCce---eEEecC--CCCEEEEEEcCCCcEEEE-eCCCcEEEEEC
Q 024676 145 SGSIRTVAWLHSDQTILSSCT---DSGGVRLWDARSGKI---VQTLET--KSPVTSAEVSRDGRYITT-ADGSSVKFWDA 215 (264)
Q Consensus 145 ~~~i~~~~~~~~~~~~~~~~~---~d~~v~iwd~~~~~~---~~~~~~--~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~ 215 (264)
........+ +++. +++... .++.|.+||+.+++. ...+.. ...+..+.++ ++.++++ ..++..+||.+
T Consensus 271 ~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~ 347 (695)
T 2bkl_A 271 VGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVA 347 (695)
T ss_dssp SSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEE
T ss_pred CCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 444455555 5565 555544 257899999988753 333333 3357778888 5555544 55777666654
Q ss_pred C-CceeeeEEecCCC--CceeeEcCCCCCEEE-E---ecCCCeEEEEEcCccee
Q 024676 216 N-HFGLVKGYNMPCN--TESASLEPKLGNIFI-A---GGEDMWVHVFDFHTGEQ 262 (264)
Q Consensus 216 ~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~---gs~d~~v~vwd~~~g~~ 262 (264)
. .++..+.+..+.. .....+.++ +..++ + ....+.|++||+.+|+.
T Consensus 348 ~~~g~~~~~l~~~~~~~v~~~~~s~d-~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 348 TLKGKPVRTVQLPGVGAASNLMGLED-LDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp ETTCCEEEECCCSSSSEECCCBSCTT-CSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred eCCCCeeEEecCCCCeEEEEeecCCC-CCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 3 3444454444322 123344453 55444 3 33467899999988763
No 184
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.67 E-value=4.5e-15 Score=135.83 Aligned_cols=205 Identities=11% Similarity=0.053 Sum_probs=136.3
Q ss_pred EeeccCCCee-----eeEeccCCCCCeEEEEEeCCCC---------cEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEE
Q 024676 11 VCHGHSRPVV-----DLFYSPITPDGFFLVSASKDSS---------PMLRNGETGDWIGTFEGHKGAVWSCCLDANALFS 76 (264)
Q Consensus 11 ~~~~h~~~v~-----~~~~~~~~~~g~~l~t~s~d~~---------v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l 76 (264)
++.+|..... .+.|+ |||++|+.++.++. +.+||+.+++.. .+..|.+.+...+|+|||+.+
T Consensus 51 ~~~~~~~~~~~~~~~~~~~S---pdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~l 126 (740)
T 4a5s_A 51 FLENSTFDEFGHSINDYSIS---PDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKL 126 (740)
T ss_dssp EECTTTTTTCCSCCCEEEEC---TTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCE
T ss_pred EEechhhhhhcccccceEEC---CCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEE
Confidence 3456654322 25666 59999999998744 459999998754 567788899999999999999
Q ss_pred EEecCCCeEEEEeCCCCcEEEEee--cCCeE-----------------EEEEECCCCCEEEEeeCCC-------------
Q 024676 77 ASGSADFTAKLWDALTGDEKHSFE--HKHIV-----------------RACAFSEDTHLLLTGGFEK------------- 124 (264)
Q Consensus 77 ~s~s~D~~v~iwd~~~~~~~~~~~--~~~~v-----------------~~~~~~~~~~~l~s~~~d~------------- 124 (264)
|.++ |+.|.+||..++...+... +...+ ..+.|+|+++.|+.++.|.
T Consensus 127 a~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~ 205 (740)
T 4a5s_A 127 AYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSD 205 (740)
T ss_dssp EEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCS
T ss_pred EEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecC
Confidence 8874 7899999998876544221 11112 2478999999999875432
Q ss_pred -----------------------cEEEeeCCC---CCC-CCeEec------cCCCCeEEEEEecCCCeEEEEeeC---CC
Q 024676 125 -----------------------ILRIFDLNR---PDA-PPREVG------NSSGSIRTVAWLHSDQTILSSCTD---SG 168 (264)
Q Consensus 125 -----------------------~i~~~d~~~---~~~-~~~~~~------~~~~~i~~~~~~~~~~~~~~~~~~---d~ 168 (264)
.+++||+.+ ++. ....+. .+...+..++|+|++..++..... +.
T Consensus 206 ~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~ 285 (740)
T 4a5s_A 206 ESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYS 285 (740)
T ss_dssp TTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEE
T ss_pred CCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEE
Confidence 477888876 532 122222 145568889999987644443332 23
Q ss_pred eEEEEECCCCc----eeE--E---ecCCCCE-----EEEEEcCCCcEEE--EeC-CC--cEEEEECCCcee
Q 024676 169 GVRLWDARSGK----IVQ--T---LETKSPV-----TSAEVSRDGRYIT--TAD-GS--SVKFWDANHFGL 220 (264)
Q Consensus 169 ~v~iwd~~~~~----~~~--~---~~~~~~v-----~~~~~s~~~~~l~--~~~-~~--~i~iwd~~~~~~ 220 (264)
.|.+||+.+++ +.. . -.....+ ....|+|||+.++ .++ ++ .|.+||+..++.
T Consensus 286 ~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~ 356 (740)
T 4a5s_A 286 VMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDC 356 (740)
T ss_dssp EEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSC
T ss_pred EEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCce
Confidence 79999999987 221 1 1122222 3678999998654 332 33 688889876543
No 185
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.67 E-value=1.8e-14 Score=119.59 Aligned_cols=222 Identities=12% Similarity=0.061 Sum_probs=139.9
Q ss_pred CeeeeEeccCCCCCeEEEEEeCCC---C--cEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCC----------
Q 024676 18 PVVDLFYSPITPDGFFLVSASKDS---S--PMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSAD---------- 82 (264)
Q Consensus 18 ~v~~~~~~~~~~~g~~l~t~s~d~---~--v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D---------- 82 (264)
.+..+.|+| ||++|+.++.++ . +.+|+..+++.......+ . +..++|+||++.++.++.+
T Consensus 60 ~~~~~~~Sp---Dg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~ 134 (347)
T 2gop_A 60 NATMPRISP---DGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFE 134 (347)
T ss_dssp SCEEEEECT---TSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC-------
T ss_pred cCCCeEECC---CCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEE
Confidence 456678885 999998887653 3 667788888765544434 3 8999999999988777632
Q ss_pred -----------------CeEEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEEeeCCC-------cEEEeeCCCCCCCC
Q 024676 83 -----------------FTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEK-------ILRIFDLNRPDAPP 138 (264)
Q Consensus 83 -----------------~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~-------~i~~~d~~~~~~~~ 138 (264)
..|.+||+.+++.+..+... .+..+.|+|++ +++++..+. ...+|.+++++ .
T Consensus 135 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~--~ 210 (347)
T 2gop_A 135 DDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK--E 210 (347)
T ss_dssp --CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE--E
T ss_pred cccceeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc--e
Confidence 57889999888763333223 67788999999 888776542 44555544332 2
Q ss_pred eEeccCCCCeEEEEEecCCCeEEEEeeCC-------CeEEEEECCCCceeEEecC-CCCEEE-EEEcCCCcEEEEeCCCc
Q 024676 139 REVGNSSGSIRTVAWLHSDQTILSSCTDS-------GGVRLWDARSGKIVQTLET-KSPVTS-AEVSRDGRYITTADGSS 209 (264)
Q Consensus 139 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~d-------~~v~iwd~~~~~~~~~~~~-~~~v~~-~~~s~~~~~l~~~~~~~ 209 (264)
..+... ..+... +|++..++..+.++ ..|.+|| +++....... ...+.. +.|+ ++.++++..++.
T Consensus 211 ~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg~~~~~~~~~~ 284 (347)
T 2gop_A 211 EKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GKVYFTLFEEGS 284 (347)
T ss_dssp EEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TEEEEEEEETTE
T ss_pred EEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-CcEEEEEecCCc
Confidence 222222 444433 77777666554332 4688888 5654433333 345775 8899 883334456788
Q ss_pred EEEEECCCceeeeEEecCCCCceeeEcCCCCCEEEEecCCCeE-EEEEcC
Q 024676 210 VKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWV-HVFDFH 258 (264)
Q Consensus 210 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~v-~vwd~~ 258 (264)
++|| +.+++...............+.+ .++++++.++.. .+|.++
T Consensus 285 ~~l~-~~~g~~~~~~~~~~~v~~~~~s~---~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 285 VNLY-IWDGEIKPIAKGRHWIMGFDVDE---IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEE-EESSSEEEEECSSSEEEEEEESS---SEEEEEECSSSCCEEEEES
T ss_pred EEEE-EcCCceEEEecCCCeEEeeeeeC---cEEEEEcCCCChHHheEeC
Confidence 9999 77554433332222233455555 677777776665 778765
No 186
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.67 E-value=8e-14 Score=111.58 Aligned_cols=237 Identities=9% Similarity=-0.059 Sum_probs=158.0
Q ss_pred CeeeeEeccCCCCCeEEE-EEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEE
Q 024676 18 PVVDLFYSPITPDGFFLV-SASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEK 96 (264)
Q Consensus 18 ~v~~~~~~~~~~~g~~l~-t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~ 96 (264)
...+|+++| +|++.+ +.+.++.|.+|+..++........+...+.++++++++.+.++.. ++.|.+||..+....
T Consensus 25 ~p~~i~~~~---~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 25 SPSGVAVDS---AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT 100 (270)
T ss_dssp CEEEEEECT---TCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE
T ss_pred CccceEECC---CCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe
Confidence 556788885 788777 557788899998766543322223445678899999988777766 889999998765432
Q ss_pred EEe-ecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEEC
Q 024676 97 HSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDA 175 (264)
Q Consensus 97 ~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~ 175 (264)
... .....+..++++++++++++...++.|.+|+..+.... ............+++.+++. ++++...++.|.+||.
T Consensus 101 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~-~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~ 178 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT-VLPFTGLNDPDGVAVDNSGN-VYVTDTDNNRVVKLEA 178 (270)
T ss_dssp ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE-ECCCCSCCSCCCEEECTTCC-EEEEEGGGTEEEEECT
T ss_pred eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeE-eeccccCCCceeEEEeCCCC-EEEEECCCCEEEEEec
Confidence 221 22246889999999998877777888999976443221 11111122456677777554 6666555689999999
Q ss_pred CCCceeEEec-CCCCEEEEEEcCCCcEEEEeC-CCcEEEEECCCceeeeEEecC--CCCceeeEcCCCCCEEEEecCCCe
Q 024676 176 RSGKIVQTLE-TKSPVTSAEVSRDGRYITTAD-GSSVKFWDANHFGLVKGYNMP--CNTESASLEPKLGNIFIAGGEDMW 251 (264)
Q Consensus 176 ~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~gs~d~~ 251 (264)
.+........ ....+..++++++|.++++.. ++.|.+||........ .... ..+..+.+.++ |.++++.+.++.
T Consensus 179 ~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~~~~~~~p~~i~~~~~-g~l~v~~~~~~~ 256 (270)
T 1rwi_B 179 ESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LPFTGLNTPLAVAVDSD-RTVYVADRGNDR 256 (270)
T ss_dssp TTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-CCCCSCSCEEEEEECTT-CCEEEEEGGGTE
T ss_pred CCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-eccCCCCCceeEEECCC-CCEEEEECCCCE
Confidence 8776543222 225688999999997776654 6789999987654322 2211 23455667764 789999999999
Q ss_pred EEEEEcCccee
Q 024676 252 VHVFDFHTGEQ 262 (264)
Q Consensus 252 v~vwd~~~g~~ 262 (264)
|++++....+.
T Consensus 257 v~~~~~~~~~~ 267 (270)
T 1rwi_B 257 VVKLTSLEHHH 267 (270)
T ss_dssp EEEECCCGGGS
T ss_pred EEEEcCCCccc
Confidence 99999876553
No 187
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.65 E-value=5.2e-13 Score=109.07 Aligned_cols=238 Identities=13% Similarity=0.134 Sum_probs=161.3
Q ss_pred eccCCCeeeeEeccCCCCCeEEEE-------EeCCCCcEEEeCCCCceEEeee----CCcCCEEEEEECCC-CcEEEEec
Q 024676 13 HGHSRPVVDLFYSPITPDGFFLVS-------ASKDSSPMLRNGETGDWIGTFE----GHKGAVWSCCLDAN-ALFSASGS 80 (264)
Q Consensus 13 ~~h~~~v~~~~~~~~~~~g~~l~t-------~s~d~~v~i~~~~~~~~~~~~~----~H~~~V~~v~~~~~-~~~l~s~s 80 (264)
.+......+++|++ +|+.+++ +..++.+.+|+..+++...... ++...+.+++++++ +.+.++..
T Consensus 14 ~~~~~~~~~~~~~~---~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~ 90 (314)
T 1pjx_A 14 TEDIPGAEGPVFDK---NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM 90 (314)
T ss_dssp ECCCTTCEEEEECT---TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET
T ss_pred hccCCCccCceECC---CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC
Confidence 33444556889984 7887777 6778899999988887543221 35577899999999 77666555
Q ss_pred CCCeEEEEeCCCCcEEEE-eec-----CCeEEEEEECCCCCEEEEeeCC---------------CcEEEeeCCCCCCCCe
Q 024676 81 ADFTAKLWDALTGDEKHS-FEH-----KHIVRACAFSEDTHLLLTGGFE---------------KILRIFDLNRPDAPPR 139 (264)
Q Consensus 81 ~D~~v~iwd~~~~~~~~~-~~~-----~~~v~~~~~~~~~~~l~s~~~d---------------~~i~~~d~~~~~~~~~ 139 (264)
.+ .|.+||.. ++.... ... ...+..++++++++++++...+ +.+..++.. ++. .
T Consensus 91 ~~-~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~--~ 165 (314)
T 1pjx_A 91 RL-GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM--I 165 (314)
T ss_dssp TT-EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE--E
T ss_pred CC-CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE--E
Confidence 44 68889987 654433 221 1347889999999888776554 456666654 321 2
Q ss_pred EeccCCCCeEEEEEe----cCCCeEEEEeeCCCeEEEEECC-CCce-----eEEecCC--CCEEEEEEcCCCcEEEEe-C
Q 024676 140 EVGNSSGSIRTVAWL----HSDQTILSSCTDSGGVRLWDAR-SGKI-----VQTLETK--SPVTSAEVSRDGRYITTA-D 206 (264)
Q Consensus 140 ~~~~~~~~i~~~~~~----~~~~~~~~~~~~d~~v~iwd~~-~~~~-----~~~~~~~--~~v~~~~~s~~~~~l~~~-~ 206 (264)
...........+++. +++..++++...++.|.+||++ +++. ...+... ..+..++++++|+++++. .
T Consensus 166 ~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~ 245 (314)
T 1pjx_A 166 QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG 245 (314)
T ss_dssp EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET
T ss_pred EeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC
Confidence 222222345678888 7666666666667899999986 4442 2223322 457889999999887664 5
Q ss_pred CCcEEEEECCCceeeeEEecC-CCCceeeEcCCCCC-EEEEecCCCeEEEEEcCc
Q 024676 207 GSSVKFWDANHFGLVKGYNMP-CNTESASLEPKLGN-IFIAGGEDMWVHVFDFHT 259 (264)
Q Consensus 207 ~~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~gs~d~~v~vwd~~~ 259 (264)
++.|..||..+++.+..+..+ ..+..+.+.+ +++ ++++...++.|..|++..
T Consensus 246 ~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~-dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 246 SSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKP-QTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TTEEEEECTTCBSCSEEEECSSSCEEEEEECT-TSSEEEEEETTTTEEEEEECSS
T ss_pred CCEEEEEcCCCCcEeEEEeCCCCCceeEEECC-CCCEEEEEeCCCCeEEEEeCCC
Confidence 678999999877766667665 3455666766 466 667777778999999764
No 188
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.65 E-value=5.8e-13 Score=110.22 Aligned_cols=202 Identities=17% Similarity=0.151 Sum_probs=143.1
Q ss_pred cCCEEEEEECCCCcEEEEecCC------------------------CeEEEEeCCCCcEEEEeec--CCeEEEEEECCCC
Q 024676 61 KGAVWSCCLDANALFSASGSAD------------------------FTAKLWDALTGDEKHSFEH--KHIVRACAFSEDT 114 (264)
Q Consensus 61 ~~~V~~v~~~~~~~~l~s~s~D------------------------~~v~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~ 114 (264)
-+.+.++++++++.++++.+.+ ++|.+||..+++....+.. -.....++++|++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 3678999999999998888877 4799999988887766542 2368899999999
Q ss_pred CEEEEeeCCCcEEEeeCCCCCCCCeEec---------cCCCCeEEEEEecCCCeEEEEee-CCCeEEEEECCCCceeEEe
Q 024676 115 HLLLTGGFEKILRIFDLNRPDAPPREVG---------NSSGSIRTVAWLHSDQTILSSCT-DSGGVRLWDARSGKIVQTL 184 (264)
Q Consensus 115 ~~l~s~~~d~~i~~~d~~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~~~~~~-~d~~v~iwd~~~~~~~~~~ 184 (264)
+++++...++.|++|+..........+. .+......+++.+.++.++++.+ .++.|++|| .+++.+..+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence 9888888889999999764422333332 12235778898875666777765 578999999 557666655
Q ss_pred cCC-----------CCEEEEEEcCC-CcEEEEe-CCCcEEEEECCCceeeeEEecC---CCCceeeEcCC-----CCCEE
Q 024676 185 ETK-----------SPVTSAEVSRD-GRYITTA-DGSSVKFWDANHFGLVKGYNMP---CNTESASLEPK-----LGNIF 243 (264)
Q Consensus 185 ~~~-----------~~v~~~~~s~~-~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~-----~~~~~ 243 (264)
... .....++++|+ +.++++. .++.|++||..+++.+..+... ..+..+.+.|. .+..+
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~ 261 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPY 261 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCC
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEE
Confidence 311 23789999998 6666665 4679999999888888777543 22333444440 13333
Q ss_pred EEecCCCeEEEEEcCcceee
Q 024676 244 IAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 244 ~~gs~d~~v~vwd~~~g~~i 263 (264)
++.+.+..|++||..+|+.+
T Consensus 262 v~~~~~~~v~~~~~~~g~~~ 281 (329)
T 3fvz_A 262 FGDQEPVQGFVMNFSSGEII 281 (329)
T ss_dssp TTCSCCCCEEEEETTTCCEE
T ss_pred eccCCCcEEEEEEcCCCeEE
Confidence 44445568999998888754
No 189
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.64 E-value=1.1e-12 Score=110.40 Aligned_cols=227 Identities=12% Similarity=0.031 Sum_probs=148.5
Q ss_pred CCCeEEEEEeC--CC---CcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEec----------CCCeEEEEeCCCC
Q 024676 29 PDGFFLVSASK--DS---SPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGS----------ADFTAKLWDALTG 93 (264)
Q Consensus 29 ~~g~~l~t~s~--d~---~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s----------~D~~v~iwd~~~~ 93 (264)
++++++..... .. .|.++|..+++.+.++..-..+ .++++||+++++.+. .++.|.+||..+.
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~ 107 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF 107 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC
Confidence 57777766653 22 7799999999988888644444 789999999987764 4678999999988
Q ss_pred cEEEEeecC--------CeEEEEEECCCCCEEEEeeC--CCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEE
Q 024676 94 DEKHSFEHK--------HIVRACAFSEDTHLLLTGGF--EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (264)
Q Consensus 94 ~~~~~~~~~--------~~v~~~~~~~~~~~l~s~~~--d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 163 (264)
+.+..+... .....+.++|++++|+.+.. ++.|.++| .+++.....+. ..+. +.+.+.+...+++
T Consensus 108 ~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~-~~~~---~~~~~~~~~~~~~ 182 (373)
T 2mad_H 108 LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS-SPTC---YHIHPGAPSTFYL 182 (373)
T ss_pred cEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC-CCce---EEEEeCCCceEEE
Confidence 877766432 23457899999999998874 47899999 87654322021 1111 1222222222222
Q ss_pred eeCCCeEEEE-----------------------------------------------ECCCCc--eeEEecC--------
Q 024676 164 CTDSGGVRLW-----------------------------------------------DARSGK--IVQTLET-------- 186 (264)
Q Consensus 164 ~~~d~~v~iw-----------------------------------------------d~~~~~--~~~~~~~-------- 186 (264)
...||++.++ |+.++. .+..+..
T Consensus 183 ~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~ 262 (373)
T 2mad_H 183 LCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKAD 262 (373)
T ss_pred EcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCccccc
Confidence 2333444444 443321 1111110
Q ss_pred ---CCCEEEEEEcCCCcEE-EEeC----------CCcEEEEECCCceeeeEEecCCCCceeeEcCCCCC-EEEEec-CCC
Q 024676 187 ---KSPVTSAEVSRDGRYI-TTAD----------GSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGN-IFIAGG-EDM 250 (264)
Q Consensus 187 ---~~~v~~~~~s~~~~~l-~~~~----------~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~gs-~d~ 250 (264)
......+.++|+++.+ ++.. ++.|.++|..+++.++.+.....+..+.++++ ++ .++++. .++
T Consensus 263 ~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~D-g~~~l~v~~~~~~ 341 (373)
T 2mad_H 263 TWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQD-GGPDLYALSAGTE 341 (373)
T ss_pred ceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCC-CCeEEEEEcCCCC
Confidence 0112336788887643 3322 24799999999999999988777888889885 55 666666 589
Q ss_pred eEEEEEcCcceee
Q 024676 251 WVHVFDFHTGEQI 263 (264)
Q Consensus 251 ~v~vwd~~~g~~i 263 (264)
.|.++|+.+++.+
T Consensus 342 ~V~ViD~~t~~vv 354 (373)
T 2mad_H 342 VLHIYDAGAGDQD 354 (373)
T ss_pred eEEEEECCCCCEE
Confidence 9999999999875
No 190
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.63 E-value=1.2e-13 Score=111.69 Aligned_cols=187 Identities=11% Similarity=0.152 Sum_probs=140.2
Q ss_pred CCCcEEEEecCCCeEEEEeCCCCcEEEEeecCC--eEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCe
Q 024676 71 ANALFSASGSADFTAKLWDALTGDEKHSFEHKH--IVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSI 148 (264)
Q Consensus 71 ~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i 148 (264)
..+..+++++.|+.|.+||.++++.+..+.... .+..+.+.|++++++ +.++.+..||. +++............+
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEM 79 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEE
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccc
Confidence 346788999999999999999999888887543 578899999999888 45778999998 5665544433223467
Q ss_pred EEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEecCC-------CCEEEEEEcCCCcEEEEeC-CCcEEEEECCCcee
Q 024676 149 RTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK-------SPVTSAEVSRDGRYITTAD-GSSVKFWDANHFGL 220 (264)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~-------~~v~~~~~s~~~~~l~~~~-~~~i~iwd~~~~~~ 220 (264)
..+...+++..+++.+.+++.|..+|. +++.+..+... .+...+...++|.++++.. ++.|..||.. ++.
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence 777888877665554432677888885 67777665421 2344567889999887654 6899999998 888
Q ss_pred eeEEecCCCCceeeEcCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 221 VKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
+-.+..+..+......+ .+.++++++.++.|..+|.++|+.+
T Consensus 158 ~w~~~~~~~~~~~~~~~-~g~~~v~~~~~~~v~~~d~~tG~~~ 199 (276)
T 3no2_A 158 LNSVKLSGTPFSSAFLD-NGDCLVACGDAHCFVQLNLESNRIV 199 (276)
T ss_dssp EEEEECSSCCCEEEECT-TSCEEEECBTTSEEEEECTTTCCEE
T ss_pred EEEEECCCCccceeEcC-CCCEEEEeCCCCeEEEEeCcCCcEE
Confidence 88888765555566665 4888999988999999999989874
No 191
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.62 E-value=8.6e-14 Score=115.46 Aligned_cols=220 Identities=15% Similarity=0.138 Sum_probs=138.1
Q ss_pred CCeeeeEeccCCCCCeEEEEEe---------CCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCC---C-
Q 024676 17 RPVVDLFYSPITPDGFFLVSAS---------KDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSAD---F- 83 (264)
Q Consensus 17 ~~v~~~~~~~~~~~g~~l~t~s---------~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D---~- 83 (264)
..+..+.+ ||++|+... .+..+.+|+..+++.. .+ ..+..++|+||+++++..+.+ +
T Consensus 15 ~~~~~~~~-----dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l----~~~~~~~~SpDg~~la~~~~~~~~~~ 84 (347)
T 2gop_A 15 AYLSDPRT-----KGELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI----ENATMPRISPDGKKIAFMRANEEKKV 84 (347)
T ss_dssp CEEEEEEE-----ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE----ESCEEEEECTTSSEEEEEEEETTTTE
T ss_pred EEcccceE-----CCcEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec----ccCCCeEECCCCCEEEEEEeccCCCc
Confidence 34455555 677766542 2567888999888743 33 467889999999998877654 3
Q ss_pred -eEEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEEeeCC---------------------------CcEEEeeCCCCC
Q 024676 84 -TAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFE---------------------------KILRIFDLNRPD 135 (264)
Q Consensus 84 -~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---------------------------~~i~~~d~~~~~ 135 (264)
.|.+||+.+++......... +..+.|+|+++.|+.++.+ ..+.+||+.+++
T Consensus 85 ~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~ 163 (347)
T 2gop_A 85 SEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE 163 (347)
T ss_dssp EEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE
T ss_pred ceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe
Confidence 47777888887666555555 8999999999988887643 568889987665
Q ss_pred CCCeEeccCCCCeEEEEEecCCCeEEEEeeCCC-------eEEEEECCCCceeEEecCCCCEEEEEEcCCCcEEEE-eCC
Q 024676 136 APPREVGNSSGSIRTVAWLHSDQTILSSCTDSG-------GVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITT-ADG 207 (264)
Q Consensus 136 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~-------~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~ 207 (264)
.. ..+.. . .+..++|+|++ ++.++..+. ...||.+.+++....... ..+..+ +|+|+.++. +.+
T Consensus 164 ~~-~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~~~--spdg~~l~~~~~~ 235 (347)
T 2gop_A 164 VI-EEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSFYAV--DSDGERILLYGKP 235 (347)
T ss_dssp EE-EEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESEEEE--EECSSCEEEEECC
T ss_pred EE-eeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeCCCceEEeccC-cceeeE--CCCCCEEEEEEcc
Confidence 31 22222 2 66788899877 555444321 344444435554333333 344444 999986653 322
Q ss_pred --------CcEEEEECCCceeeeEEecCC-CCce-eeEcCCCCCEEEEecCCCeEEEEEcCcce
Q 024676 208 --------SSVKFWDANHFGLVKGYNMPC-NTES-ASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 208 --------~~i~iwd~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~gs~d~~v~vwd~~~g~ 261 (264)
..|.+|| +++......... .... ..+. ++ ++++++.++.+++| +.+|+
T Consensus 236 ~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s--dg-~~~~~~~~~~~~l~-~~~g~ 293 (347)
T 2gop_A 236 EKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD--GK-VYFTLFEEGSVNLY-IWDGE 293 (347)
T ss_dssp SSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET--TE-EEEEEEETTEEEEE-EESSS
T ss_pred ccCCccccceEEEEC--CCceEeccccCCcccCCccEEc--Cc-EEEEEecCCcEEEE-EcCCc
Confidence 3577777 443222111111 1222 4454 46 88899999999999 87554
No 192
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.62 E-value=1.5e-11 Score=99.47 Aligned_cols=236 Identities=8% Similarity=0.005 Sum_probs=164.0
Q ss_pred eccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEe-eeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCC
Q 024676 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGT-FEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL 91 (264)
Q Consensus 13 ~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~-~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~ 91 (264)
..+...+.+|++.| +|+..++...++.+.+|+.. ++.... +..+...+.++++++++.+.++...++.|..||..
T Consensus 11 ~~~~~~~~~i~~d~---~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 11 TNQDTGPYGITVSD---KGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp CSSSCCEEEEEECT---TSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCcCCCccceEECC---CCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 34566788999985 88887777778899999988 664322 22355678999999999988887778899999976
Q ss_pred CCcEEEEee---cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCC
Q 024676 92 TGDEKHSFE---HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSG 168 (264)
Q Consensus 92 ~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~ 168 (264)
+.. ..+. ....+..++++++++++++...++.+..||. +++............+..+++.+++ .+.++...++
T Consensus 87 -g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~ 162 (299)
T 2z2n_A 87 -GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDN-ALWFTENQNN 162 (299)
T ss_dssp -SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS-CEEEEETTTT
T ss_pred -CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCC-CEEEEeCCCC
Confidence 332 2222 3446889999999988887777888999987 4332211112233457778877655 5555555568
Q ss_pred eEEEEECCCCceeEE-ec-CCCCEEEEEEcCCCcEEEEeC-CCcEEEEECCCceeeeEEecC---CCCceeeEcCCCCCE
Q 024676 169 GVRLWDARSGKIVQT-LE-TKSPVTSAEVSRDGRYITTAD-GSSVKFWDANHFGLVKGYNMP---CNTESASLEPKLGNI 242 (264)
Q Consensus 169 ~v~iwd~~~~~~~~~-~~-~~~~v~~~~~s~~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 242 (264)
.|..||. +++.... .. ....+..++++++|+++++.. ++.|..||. +++ +..+..+ ..+..+.+.++ +.+
T Consensus 163 ~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~-~~~~~~~~~~~~~~~i~~~~~-g~l 238 (299)
T 2z2n_A 163 AIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE-ITEFKIPTPNARPHAITAGAG-IDL 238 (299)
T ss_dssp EEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC-EEEEECSSTTCCEEEEEECST-TCE
T ss_pred EEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCc-EEEEECCCCCCCceeEEECCC-CCE
Confidence 9999999 6665432 22 234588999999998776654 578999998 554 3334433 33445566664 777
Q ss_pred EEEecCCCeEEEEEcCcce
Q 024676 243 FIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 243 ~~~gs~d~~v~vwd~~~g~ 261 (264)
+++...++.|..||. +|+
T Consensus 239 ~v~~~~~~~i~~~d~-~g~ 256 (299)
T 2z2n_A 239 WFTEWGANKIGRLTS-NNI 256 (299)
T ss_dssp EEEETTTTEEEEEET-TTE
T ss_pred EEeccCCceEEEECC-CCc
Confidence 777767888999997 454
No 193
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.59 E-value=3.8e-13 Score=122.27 Aligned_cols=228 Identities=10% Similarity=-0.015 Sum_probs=146.4
Q ss_pred CCCCeEEEEEeCCC---CcEEE--eCCCCceEEee------eCCcCCEEEEEECCCCcEEE-----EecCCCeEEEEeCC
Q 024676 28 TPDGFFLVSASKDS---SPMLR--NGETGDWIGTF------EGHKGAVWSCCLDANALFSA-----SGSADFTAKLWDAL 91 (264)
Q Consensus 28 ~~~g~~l~t~s~d~---~v~i~--~~~~~~~~~~~------~~H~~~V~~v~~~~~~~~l~-----s~s~D~~v~iwd~~ 91 (264)
+++|.+++-...++ ...+| +...++....+ ++|...+.+++|+||+++++ +|+.+.+|++||+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 35888887776655 34555 33344432222 25666789999999999988 56667899999999
Q ss_pred CCcEE-EEeecCCeEEEEEECCCCCEEEEeeCCCc-------------EEEeeCCCCCCCCeEec---cCCCCeEEEEEe
Q 024676 92 TGDEK-HSFEHKHIVRACAFSEDTHLLLTGGFEKI-------------LRIFDLNRPDAPPREVG---NSSGSIRTVAWL 154 (264)
Q Consensus 92 ~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~~~d~~-------------i~~~d~~~~~~~~~~~~---~~~~~i~~~~~~ 154 (264)
+++.+ ...........++|+|+++.|+.++.|.. |++|++.++........ .+...+..+.|+
T Consensus 156 tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~S 235 (695)
T 2bkl_A 156 SGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLS 235 (695)
T ss_dssp TCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEEC
T ss_pred CCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEEC
Confidence 98764 21111111157899999999999988776 99999987653222222 223467788999
Q ss_pred cCCCeEEEEeeCC-C--eEEEEECCCCceeEEecCCCCEEEEEEcCCCcEEEEeC----CCcEEEEECCCcee--eeEEe
Q 024676 155 HSDQTILSSCTDS-G--GVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTAD----GSSVKFWDANHFGL--VKGYN 225 (264)
Q Consensus 155 ~~~~~~~~~~~~d-~--~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----~~~i~iwd~~~~~~--~~~~~ 225 (264)
+++..++++..+. + .|.+||..+++...............+ ++|.+++.++ +..|.+||+.+.+. .+.+.
T Consensus 236 pDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 314 (695)
T 2bkl_A 236 RDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIV 314 (695)
T ss_dssp TTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEE
T ss_pred CCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEe
Confidence 9988877766553 2 677777766654433333334444445 4555544443 36799999977542 22222
Q ss_pred cCC-C--CceeeEcCCCCCEEEEecCCCeEEEEEcC
Q 024676 226 MPC-N--TESASLEPKLGNIFIAGGEDMWVHVFDFH 258 (264)
Q Consensus 226 ~~~-~--~~~~~~~~~~~~~~~~gs~d~~v~vwd~~ 258 (264)
.+. . .....+. .+.+++++..|+..++|.++
T Consensus 315 ~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 315 PEDSSASLLSVSIV--GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp CCCSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEE
T ss_pred cCCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEe
Confidence 211 1 2233444 47889999999999998654
No 194
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.57 E-value=7.7e-13 Score=121.08 Aligned_cols=242 Identities=10% Similarity=-0.003 Sum_probs=147.6
Q ss_pred ccCCCeeeeEeccCCCCCeEEEEEeCC-----CCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCe----
Q 024676 14 GHSRPVVDLFYSPITPDGFFLVSASKD-----SSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFT---- 84 (264)
Q Consensus 14 ~h~~~v~~~~~~~~~~~g~~l~t~s~d-----~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~---- 84 (264)
+|+..+..+.|+| ||++||.++.+ ..+++||+.+++.+.. ..+...+..++|+|| +.++.++.|..
T Consensus 160 ~~~~~~~~~~~SP---DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~ 234 (741)
T 1yr2_A 160 DGATALDAWAASD---DGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQ 234 (741)
T ss_dssp ---EEEEEEEECT---TSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC----
T ss_pred CCCEEEEeEEECC---CCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCccccc
Confidence 4545677888885 99999887654 3599999999987543 112222356889999 88877776654
Q ss_pred ----------EEEEeCCCCcE--EEEeec---CCeEEEEEECCCCCEEEEeeCC-----CcEEEeeCCCCCCC-CeEecc
Q 024676 85 ----------AKLWDALTGDE--KHSFEH---KHIVRACAFSEDTHLLLTGGFE-----KILRIFDLNRPDAP-PREVGN 143 (264)
Q Consensus 85 ----------v~iwd~~~~~~--~~~~~~---~~~v~~~~~~~~~~~l~s~~~d-----~~i~~~d~~~~~~~-~~~~~~ 143 (264)
|++|++.++.. ...+.. ...+..+.|+|++++|+..+.+ ..+.+||+.++... ...+..
T Consensus 235 ~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~ 314 (741)
T 1yr2_A 235 AFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP 314 (741)
T ss_dssp ----CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC
T ss_pred ccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecC
Confidence 88999877652 233332 2357889999999988877654 37999998765222 333333
Q ss_pred CCCCeEEEEEecCCCeEEEEeeC---CCeEEEEECCCC--ceeEEecCC-CCEEEEEEcCCCcEEE-EeCCCcEEEEECC
Q 024676 144 SSGSIRTVAWLHSDQTILSSCTD---SGGVRLWDARSG--KIVQTLETK-SPVTSAEVSRDGRYIT-TADGSSVKFWDAN 216 (264)
Q Consensus 144 ~~~~i~~~~~~~~~~~~~~~~~~---d~~v~iwd~~~~--~~~~~~~~~-~~v~~~~~s~~~~~l~-~~~~~~i~iwd~~ 216 (264)
......... .++++.++..... ++.|.+||+.++ +....+... ..+..+.++ ++.+++ ...++..+||.+.
T Consensus 315 ~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 315 DLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp SSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred CCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 333333333 4667766655432 356999999885 333333333 335567777 444444 4456666665443
Q ss_pred -CceeeeEEecCCC--CceeeEcCCCCCEEEEe---cCCCeEEEEEcCccee
Q 024676 217 -HFGLVKGYNMPCN--TESASLEPKLGNIFIAG---GEDMWVHVFDFHTGEQ 262 (264)
Q Consensus 217 -~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g---s~d~~v~vwd~~~g~~ 262 (264)
.++..+.+..+.. .....+.++...++++. ...+.+++||+.+|+.
T Consensus 393 ~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 393 LDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp TTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred CCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 3444555554322 22344555433444433 3468899999988763
No 195
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.56 E-value=1.3e-11 Score=105.26 Aligned_cols=233 Identities=12% Similarity=0.049 Sum_probs=157.9
Q ss_pred CCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCC--eEEEEeCCCCc
Q 024676 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADF--TAKLWDALTGD 94 (264)
Q Consensus 17 ~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~--~v~iwd~~~~~ 94 (264)
.....|+|+| +|+++++...++.|++|+..++........... .. ++|++++.+++.+..++ .|.+|+...+.
T Consensus 131 ~~P~~la~d~---~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~-~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 131 KYMWGIAAVG---NNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG-GK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp CCEEEEEECS---TTEEEEEETTTTEEEEEETTTTEEEEEEETCCB-CB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred CCceEEEEeC---CCCEEEEecCCCcEEEEECCCCEEEEeeccCCC-Cc-eeEecCCCcEEEEecCCCceEEEEEcCCCc
Confidence 4566888885 888888888888999999988876544444222 23 89999999888777765 78888877665
Q ss_pred EEEEe----e-cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeE---eccCCCCe-E-EEEEecCCCeEEEEe
Q 024676 95 EKHSF----E-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPRE---VGNSSGSI-R-TVAWLHSDQTILSSC 164 (264)
Q Consensus 95 ~~~~~----~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~---~~~~~~~i-~-~~~~~~~~~~~~~~~ 164 (264)
....+ . ....+..++++|++..|+.+..++.|..||..++...... .....+.. . .+++.|.++.++++.
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred eeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 43333 2 3345678899995555666777888999998765421110 11111222 2 788888778888887
Q ss_pred eCCCeEEEEECCCCceeEEecC---------------CCCEEEEEEcCCCcEEEEe--CCCcEEEEECCCceeeeEEecC
Q 024676 165 TDSGGVRLWDARSGKIVQTLET---------------KSPVTSAEVSRDGRYITTA--DGSSVKFWDANHFGLVKGYNMP 227 (264)
Q Consensus 165 ~~d~~v~iwd~~~~~~~~~~~~---------------~~~v~~~~~s~~~~~l~~~--~~~~i~iwd~~~~~~~~~~~~~ 227 (264)
..++.|+.||.... ....... -.....++++|+|+++++. .+..|+.||+.++.. .++...
T Consensus 286 ~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~ 363 (409)
T 3hrp_A 286 QNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQ 363 (409)
T ss_dssp TTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEEC
T ss_pred CCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCC
Confidence 77789999998754 2111111 1347889999999876664 457899999777653 333221
Q ss_pred ----------------CCCceeeEcCCCCCEEEEecCCCeEEEEEc
Q 024676 228 ----------------CNTESASLEPKLGNIFIAGGEDMWVHVFDF 257 (264)
Q Consensus 228 ----------------~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~ 257 (264)
..+..+++.++ +.++++-..++.|+.+.+
T Consensus 364 ~~~~g~~~g~~~~~~~~~P~giavd~~-g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 364 VDVASQIDGTPLEATFNYPYDICYDGE-GGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TTCBSCCCBSTTTCCBSSEEEEEECSS-SEEEEEESTTCEEEEEEE
T ss_pred CCCCCcCCCChhceEeCCceEEEEcCC-CCEEEEECCCCeEEEEEe
Confidence 12345566665 888888888888888765
No 196
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.55 E-value=3.1e-12 Score=103.98 Aligned_cols=201 Identities=14% Similarity=0.112 Sum_probs=133.1
Q ss_pred eeccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCC----cCCEEEEEECCCCcEEEE----ecC--
Q 024676 12 CHGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGH----KGAVWSCCLDANALFSAS----GSA-- 81 (264)
Q Consensus 12 ~~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H----~~~V~~v~~~~~~~~l~s----~s~-- 81 (264)
+..+...+.+|+++| +|+++++...++.+.+|+..+++........ ...+..+++++++.+.+| |..
T Consensus 64 ~~~~~~~~~~l~~~~---dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~ 140 (296)
T 3e5z_A 64 EMHPSHHQNGHCLNK---QGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKP 140 (296)
T ss_dssp EESSCSSEEEEEECT---TCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCG
T ss_pred EECCCCCcceeeECC---CCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccc
Confidence 345667788999986 8888888877889999999888754333221 234567999999998887 331
Q ss_pred -----------CCeEEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCC-CCCC-C-CeEeccCCCC
Q 024676 82 -----------DFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLN-RPDA-P-PREVGNSSGS 147 (264)
Q Consensus 82 -----------D~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~-~~~~-~-~~~~~~~~~~ 147 (264)
.+.|..++.. +.......+....+.++|+|+++.+++.+.++.|.+|++. .+.. . ........+.
T Consensus 141 ~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~ 219 (296)
T 3e5z_A 141 EEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGK 219 (296)
T ss_dssp GGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSC
T ss_pred cccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCC
Confidence 2345445544 4444444455567899999999988777778999999986 3322 1 1111122334
Q ss_pred eEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEecCCCCEEEEEE-cCCCcEEEEeCCCcEEEEECCCcee
Q 024676 148 IRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEV-SRDGRYITTADGSSVKFWDANHFGL 220 (264)
Q Consensus 148 i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~~~~~~~i~iwd~~~~~~ 220 (264)
...+++.+++. +.++. ++.|.+||.+ ++.+..+.....+.+++| +|+++.|..+..+.+.-++.++.+.
T Consensus 220 p~~i~~d~~G~-l~v~~--~~~v~~~~~~-g~~~~~~~~~~~~~~~~f~~~d~~~L~v~t~~~l~~~~~~~~~~ 289 (296)
T 3e5z_A 220 TDGLRVDAGGL-IWASA--GDGVHVLTPD-GDELGRVLTPQTTSNLCFGGPEGRTLYMTVSTEFWSIETNVRGL 289 (296)
T ss_dssp CCSEEEBTTSC-EEEEE--TTEEEEECTT-SCEEEEEECSSCCCEEEEESTTSCEEEEEETTEEEEEECSCCBC
T ss_pred CCeEEECCCCC-EEEEc--CCeEEEECCC-CCEEEEEECCCCceeEEEECCCCCEEEEEcCCeEEEEEcccccc
Confidence 55677777664 54444 5899999987 666666654433788888 6888765544444555556665543
No 197
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.53 E-value=2.2e-10 Score=92.49 Aligned_cols=233 Identities=9% Similarity=0.011 Sum_probs=155.7
Q ss_pred cCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeee--CCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCC
Q 024676 15 HSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFE--GHKGAVWSCCLDANALFSASGSADFTAKLWDALT 92 (264)
Q Consensus 15 h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~--~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~ 92 (264)
+...+.+|++.| +|+..++...++.+..|+.. ++. ..+. .....+..+++++++.+.++...++.|..||. +
T Consensus 55 ~~~~~~~i~~~~---~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~ 128 (299)
T 2z2n_A 55 PDAKVMCLTISS---DGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-D 128 (299)
T ss_dssp TTCCEEEEEECT---TSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-T
T ss_pred ccCceeeEEECC---CCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-C
Confidence 445678888885 88888887778889999876 443 2232 34567899999999988888877889999998 5
Q ss_pred CcEEEEe-e-cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeE
Q 024676 93 GDEKHSF-E-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGV 170 (264)
Q Consensus 93 ~~~~~~~-~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v 170 (264)
+...... . ....+..+++++++++.++...++.+..||. +++............+..+++.+++. +.++...++.|
T Consensus 129 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i 206 (299)
T 2z2n_A 129 GKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDA-LWFVEIIGNKI 206 (299)
T ss_dssp CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTEE
T ss_pred CCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCC-EEEEccCCceE
Confidence 5433222 1 3356889999999988877766788999998 44332111222234567777776554 55555556899
Q ss_pred EEEECCCCceeEE-ec-CCCCEEEEEEcCCCcEEEEe-CCCcEEEEECCCceeeeEEecC---CCCceeeEcCCCCCEEE
Q 024676 171 RLWDARSGKIVQT-LE-TKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMP---CNTESASLEPKLGNIFI 244 (264)
Q Consensus 171 ~iwd~~~~~~~~~-~~-~~~~v~~~~~s~~~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 244 (264)
.+||. +++.... .. ....+..++++++|+++++. .++.|..||.. ++ +..+..+ ..+..+.+ + .+.+++
T Consensus 207 ~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~-~~~~~~~~~~~~~~~i~~-~-~g~l~v 281 (299)
T 2z2n_A 207 GRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN-NI-IEEYPIQIKSAEPHGICF-D-GETIWF 281 (299)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT-TE-EEEEECSSSSCCEEEEEE-C-SSCEEE
T ss_pred EEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECCC-Cc-eEEEeCCCCCCccceEEe-c-CCCEEE
Confidence 99999 6664332 22 23568899999999877765 46789999983 43 4455433 23444555 4 577777
Q ss_pred EecCCCeEEEEEcCcce
Q 024676 245 AGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 245 ~gs~d~~v~vwd~~~g~ 261 (264)
+.+ .+.+..++.++++
T Consensus 282 ~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 282 AME-CDKIGKLTLIKDN 297 (299)
T ss_dssp EET-TTEEEEEEEC---
T ss_pred Eec-CCcEEEEEcCccc
Confidence 665 4567777776654
No 198
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.53 E-value=1.6e-11 Score=108.62 Aligned_cols=191 Identities=16% Similarity=0.131 Sum_probs=142.3
Q ss_pred CCCCcEEEEecCCCeEEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCC--CCCCCCeEeccCCCC
Q 024676 70 DANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLN--RPDAPPREVGNSSGS 147 (264)
Q Consensus 70 ~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~--~~~~~~~~~~~~~~~ 147 (264)
++.+.++++...+++|.++|..+++.+..+.....+..+.++|+++++++++.|+.+.+||+. +.+.. ..+. ....
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v-~~i~-~G~~ 241 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTV-AEIK-IGSE 241 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEE-EEEE-CCSE
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEe-EEEe-cCCC
Confidence 345667788999999999999999999888877778899999999999999999999999995 44332 2222 2234
Q ss_pred eEEEEEe----cCCCeEEEEeeCCCeEEEEECCCCceeEEecCC------------CCEEEEEEcCCCcE-EEEe-CCCc
Q 024676 148 IRTVAWL----HSDQTILSSCTDSGGVRLWDARSGKIVQTLETK------------SPVTSAEVSRDGRY-ITTA-DGSS 209 (264)
Q Consensus 148 i~~~~~~----~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~------------~~v~~~~~s~~~~~-l~~~-~~~~ 209 (264)
...++++ |++..++++...+++|.|+|..+.+.+..+... ..+..+..++++.. ++.. +++.
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~ 321 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 321 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe
Confidence 5678888 577788888888899999999999988766421 24778888988754 4443 4689
Q ss_pred EEEEECCCcee--eeEEecCCCCceeeEcCCCCCEE-EEecCCCeEEEEEcCcceee
Q 024676 210 VKFWDANHFGL--VKGYNMPCNTESASLEPKLGNIF-IAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 210 i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~gs~d~~v~vwd~~~g~~i 263 (264)
|.++|....+. +..+.....+....+.++ +++| ++...++.|.++|+++++.+
T Consensus 322 v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pd-gr~~~va~~~sn~V~ViD~~t~kl~ 377 (567)
T 1qks_A 322 ILLVDYTDLNNLKTTEISAERFLHDGGLDGS-HRYFITAANARNKLVVIDTKEGKLV 377 (567)
T ss_dssp EEEEETTCSSEEEEEEEECCSSEEEEEECTT-SCEEEEEEGGGTEEEEEETTTTEEE
T ss_pred EEEEecCCCccceeeeeeccccccCceECCC-CCEEEEEeCCCCeEEEEECCCCcEE
Confidence 99999876432 333433334445667775 6654 55667889999999998764
No 199
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.52 E-value=5.1e-12 Score=115.06 Aligned_cols=232 Identities=12% Similarity=0.033 Sum_probs=144.3
Q ss_pred CCCeEEEEEeCCC-C--cEEE--eCCCCceEEee------eCCcCCEEEEEECCCCcEEEEecCCC-----eEEEEeCCC
Q 024676 29 PDGFFLVSASKDS-S--PMLR--NGETGDWIGTF------EGHKGAVWSCCLDANALFSASGSADF-----TAKLWDALT 92 (264)
Q Consensus 29 ~~g~~l~t~s~d~-~--v~i~--~~~~~~~~~~~------~~H~~~V~~v~~~~~~~~l~s~s~D~-----~v~iwd~~~ 92 (264)
|+|.+++-...++ . -.+| +...++....+ .+|...+..++|+||+++++.++.++ .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 5787776554433 1 1344 33344332111 23555688899999999987654433 899999999
Q ss_pred CcEEEEeecCCeEEEEEECCCCCEEEEeeCCCc----------------EEEeeCCCCCCCCeEecc---CCCCeEEEEE
Q 024676 93 GDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKI----------------LRIFDLNRPDAPPREVGN---SSGSIRTVAW 153 (264)
Q Consensus 93 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~----------------i~~~d~~~~~~~~~~~~~---~~~~i~~~~~ 153 (264)
++..........+..+.|+|+++.|+.++.++. |++|++.++......... +......+.|
T Consensus 161 g~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~ 240 (710)
T 2xdw_A 161 AKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL 240 (710)
T ss_dssp TEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEE
T ss_pred CCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEE
Confidence 986653322222567899999999999888766 999999766432222211 2344678899
Q ss_pred ecCCCeEEEEeeC----CCeEEEEECCC------Cc-eeEEec-CCCCEEEEEEcCCCcEEE-EeC-C---CcEEEEECC
Q 024676 154 LHSDQTILSSCTD----SGGVRLWDARS------GK-IVQTLE-TKSPVTSAEVSRDGRYIT-TAD-G---SSVKFWDAN 216 (264)
Q Consensus 154 ~~~~~~~~~~~~~----d~~v~iwd~~~------~~-~~~~~~-~~~~v~~~~~s~~~~~l~-~~~-~---~~i~iwd~~ 216 (264)
+|++..++.+... +..|.+||+.+ ++ ....+. ....+.. .++|+|..|+ .+. + ..|.+||+.
T Consensus 241 SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~ 319 (710)
T 2xdw_A 241 SDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFT 319 (710)
T ss_dssp CTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETT
T ss_pred cCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 9988887766542 46899999987 53 233333 3333333 4788886543 333 2 368999998
Q ss_pred Cce--eeeEEecCCC---CceeeEcCCCCCEEEEecCCCeE--EEEEcCccee
Q 024676 217 HFG--LVKGYNMPCN---TESASLEPKLGNIFIAGGEDMWV--HVFDFHTGEQ 262 (264)
Q Consensus 217 ~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~gs~d~~v--~vwd~~~g~~ 262 (264)
+.+ ..+.+..+.. .....+.+ .+.+++++..|+.. ++||+.+|+.
T Consensus 320 ~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~lv~~~~~~g~~~l~~~~~~~g~~ 371 (710)
T 2xdw_A 320 DPEESKWKVLVPEHEKDVLEWVACVR-SNFLVLCYLHDVKNTLQLHDLATGAL 371 (710)
T ss_dssp SCCGGGCEEEECCCSSCEEEEEEEET-TTEEEEEEEETTEEEEEEEETTTCCE
T ss_pred CCCcccceeccCCCCCCeEEEEEEEc-CCEEEEEEEECCEEEEEEEECCCCCE
Confidence 763 1233322211 22345553 47788889888854 5567656653
No 200
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.52 E-value=2.7e-12 Score=107.64 Aligned_cols=237 Identities=13% Similarity=0.065 Sum_probs=155.7
Q ss_pred eeEeccCCCCCeEEEEEe----------CCCCcEEEeCCCCceEEeeeCC-------cCCEEEEEECCCCcEEEEecC--
Q 024676 21 DLFYSPITPDGFFLVSAS----------KDSSPMLRNGETGDWIGTFEGH-------KGAVWSCCLDANALFSASGSA-- 81 (264)
Q Consensus 21 ~~~~~~~~~~g~~l~t~s----------~d~~v~i~~~~~~~~~~~~~~H-------~~~V~~v~~~~~~~~l~s~s~-- 81 (264)
.++++| ||++|..++ .++.|.+||..+++.++++.-- ...-+.++|+||+++++.+..
T Consensus 82 ~va~sp---DG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~ 158 (386)
T 3sjl_D 82 NPVVAD---DGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP 158 (386)
T ss_dssp EEEECT---TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS
T ss_pred cEEECC---CCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCC
Confidence 388885 999887765 3678999999999988877421 112356889999998876653
Q ss_pred CCeEEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCC-CCCCCeE---eccCCCCeE-EEEEecC
Q 024676 82 DFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNR-PDAPPRE---VGNSSGSIR-TVAWLHS 156 (264)
Q Consensus 82 D~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~-~~~~~~~---~~~~~~~i~-~~~~~~~ 156 (264)
+++|.++|+.+++.+.+++.... ...+....+.+++.+.|+.+-+.++.. +...... +.....++. ...|.+.
T Consensus 159 ~~~VsVID~~t~~vv~tI~v~g~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 236 (386)
T 3sjl_D 159 APAVGVVDLEGKAFKRMLDVPDC--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQK 236 (386)
T ss_dssp SCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETT
T ss_pred CCeEEEEECCCCcEEEEEECCCc--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcC
Confidence 68999999999998888865443 122322445666777788877777765 3321100 000111221 1244444
Q ss_pred CCeEEEEeeCCCeEEEEECCCCce--eEEec--------C---CCCEEEEEEcCCCcEE-EE-eC---------CCcEEE
Q 024676 157 DQTILSSCTDSGGVRLWDARSGKI--VQTLE--------T---KSPVTSAEVSRDGRYI-TT-AD---------GSSVKF 212 (264)
Q Consensus 157 ~~~~~~~~~~d~~v~iwd~~~~~~--~~~~~--------~---~~~v~~~~~s~~~~~l-~~-~~---------~~~i~i 212 (264)
++.++.. +.+++|.+.|+.++.. +..+. . ......+.++|+++.+ +. .. ++.|-+
T Consensus 237 dG~~~~v-s~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~v 315 (386)
T 3sjl_D 237 AGRLVWP-TYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVV 315 (386)
T ss_dssp TTEEEEE-BTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred CCcEEEE-eCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEE
Confidence 5544443 3468999999987652 22222 0 1123346778887654 32 21 247999
Q ss_pred EECCCceeeeEEecCCCCceeeEcCCCC-CEEEEecCCCeEEEEEcCcceee
Q 024676 213 WDANHFGLVKGYNMPCNTESASLEPKLG-NIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 213 wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
.|+.+++.++.+.....+..+.++++.. .++++...++.|.++|..+++.+
T Consensus 316 iD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 316 LDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEEL 367 (386)
T ss_dssp EETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred EECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEE
Confidence 9999999999998876677888888643 34555677999999999999875
No 201
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.51 E-value=1.3e-10 Score=94.61 Aligned_cols=222 Identities=10% Similarity=0.048 Sum_probs=150.2
Q ss_pred eeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEEEe
Q 024676 20 VDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSF 99 (264)
Q Consensus 20 ~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 99 (264)
-+..|+| .++..+++...++.|..|+..+++.. .+. ....+.++++++++.++++. +..|.+||..++......
T Consensus 16 Egp~w~~--~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~ 89 (297)
T 3g4e_A 16 ESPVWEE--VSNSLLFVDIPAKKVCRWDSFTKQVQ-RVT-MDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLA 89 (297)
T ss_dssp EEEEEET--TTTEEEEEETTTTEEEEEETTTCCEE-EEE-CSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEE
T ss_pred cCCeEEC--CCCEEEEEECCCCEEEEEECCCCcEE-EEe-CCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEE
Confidence 3678886 35677788888899999999887652 332 34678999999999966654 567999998887644333
Q ss_pred ec-----CCeEEEEEECCCCCEEEEeeCC---------CcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEee
Q 024676 100 EH-----KHIVRACAFSEDTHLLLTGGFE---------KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT 165 (264)
Q Consensus 100 ~~-----~~~v~~~~~~~~~~~l~s~~~d---------~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 165 (264)
.. ...++.+.++|+++++++.... ..-.+|.+..... ...........+.++|++++..++++.+
T Consensus 90 ~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~~~~~~pngi~~spdg~~lyv~~~ 168 (297)
T 3g4e_A 90 TVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYFDQVDISNGLDWSLDHKIFYYIDS 168 (297)
T ss_dssp ECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEEEEESBEEEEEECTTSCEEEEEEG
T ss_pred ecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEeeccccccceEEcCCCCEEEEecC
Confidence 22 2347889999999977754322 2345555542211 1222222234577899988887777777
Q ss_pred CCCeEEEEEC--CCCcee-----EEec-CCCCEEEEEEcCCCcEEEEe-CCCcEEEEECCCceeeeEEecCC-CCceeeE
Q 024676 166 DSGGVRLWDA--RSGKIV-----QTLE-TKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPC-NTESASL 235 (264)
Q Consensus 166 ~d~~v~iwd~--~~~~~~-----~~~~-~~~~v~~~~~s~~~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~~-~~~~~~~ 235 (264)
.++.|.+||+ .+++.. ..+. ....+..+++.++|++.++. .++.|..||..+++.+..+..+. .+.+++|
T Consensus 169 ~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f 248 (297)
T 3g4e_A 169 LSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCF 248 (297)
T ss_dssp GGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEE
T ss_pred CCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEE
Confidence 7789999987 455432 1222 12457889999999876664 46789999999888888888773 5566777
Q ss_pred c-CCCCCEEEEecC
Q 024676 236 E-PKLGNIFIAGGE 248 (264)
Q Consensus 236 ~-~~~~~~~~~gs~ 248 (264)
. ++.+.++++.+.
T Consensus 249 ~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 249 GGKNYSEMYVTCAR 262 (297)
T ss_dssp ESGGGCEEEEEEBC
T ss_pred eCCCCCEEEEEcCC
Confidence 6 544556666544
No 202
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.51 E-value=8.9e-12 Score=113.22 Aligned_cols=239 Identities=16% Similarity=0.085 Sum_probs=150.0
Q ss_pred ccCCCeeeeEeccCCCCCeEEEE-----EeCCCCcEEEeCCCCceEEe-eeCCcCCEEEEEECCCCcEEEEecCCC----
Q 024676 14 GHSRPVVDLFYSPITPDGFFLVS-----ASKDSSPMLRNGETGDWIGT-FEGHKGAVWSCCLDANALFSASGSADF---- 83 (264)
Q Consensus 14 ~h~~~v~~~~~~~~~~~g~~l~t-----~s~d~~v~i~~~~~~~~~~~-~~~H~~~V~~v~~~~~~~~l~s~s~D~---- 83 (264)
+|+..+..+.|+| ||++||- |+.+..++++|+.+|+.+.. +.+. ....++|+ |++.|+.++.|.
T Consensus 126 ~~~~~l~~~~~Sp---Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~--k~~~~~Ws-Dg~~l~y~~~~~~~~~ 199 (693)
T 3iuj_A 126 DGTTALDQLSFSR---DGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV--KFSGISWL-GNEGFFYSSYDKPDGS 199 (693)
T ss_dssp TSCCEEEEEEECT---TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE--ESCCCEEE-TTTEEEEEESSCCC--
T ss_pred CCcEEEEEEEECC---CCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc--eeccEEEe-CCCEEEEEEecCcccc
Confidence 5666788888885 9998873 33335789999999986543 2221 12457899 999888777774
Q ss_pred ---------eEEEEeCCCCcE--EEEeec----CCeEEEEEECCCCCEEEEee----CCCcEEEeeCCCCCCCCeEeccC
Q 024676 84 ---------TAKLWDALTGDE--KHSFEH----KHIVRACAFSEDTHLLLTGG----FEKILRIFDLNRPDAPPREVGNS 144 (264)
Q Consensus 84 ---------~v~iwd~~~~~~--~~~~~~----~~~v~~~~~~~~~~~l~s~~----~d~~i~~~d~~~~~~~~~~~~~~ 144 (264)
.|++|++.++.. ...+.. ...+..+.++|++++|+... .++.+.++|+.++......+...
T Consensus 200 ~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~ 279 (693)
T 3iuj_A 200 ELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD 279 (693)
T ss_dssp -----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS
T ss_pred cccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC
Confidence 499999887642 333332 23467889999999886433 23589999998765444444444
Q ss_pred CCCeEEEEEecCCCeEEEEeeCC---CeEEEEECCCCce--eEEe-cCCCCEEEEEEcCCCcEEEEe--CCC--cEEEEE
Q 024676 145 SGSIRTVAWLHSDQTILSSCTDS---GGVRLWDARSGKI--VQTL-ETKSPVTSAEVSRDGRYITTA--DGS--SVKFWD 214 (264)
Q Consensus 145 ~~~i~~~~~~~~~~~~~~~~~~d---~~v~iwd~~~~~~--~~~~-~~~~~v~~~~~s~~~~~l~~~--~~~--~i~iwd 214 (264)
....... +.++++.+++....+ +.|..+|+.++.. ...+ .+...+. .+++++.+|+.. .++ .|++||
T Consensus 280 ~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d 356 (693)
T 3iuj_A 280 LDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFD 356 (693)
T ss_dssp SSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEEC
T ss_pred CCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEE
Confidence 4444433 566677766655443 6799999988754 2233 3333333 788888766543 343 688999
Q ss_pred CCCceeeeEEecCCCCc--eeeEcCCCCCEEEEecC---CCeEEEEEcCccee
Q 024676 215 ANHFGLVKGYNMPCNTE--SASLEPKLGNIFIAGGE---DMWVHVFDFHTGEQ 262 (264)
Q Consensus 215 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~gs~---d~~v~vwd~~~g~~ 262 (264)
+... ..+.+..+.... .....++...++++.+. -+.++.||+.+|+.
T Consensus 357 ~~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 357 YEGK-RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp TTSC-EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred CCCC-eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 8744 344454433222 22334443445544433 27899999887753
No 203
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.48 E-value=9.1e-12 Score=99.51 Aligned_cols=199 Identities=8% Similarity=-0.086 Sum_probs=136.5
Q ss_pred cCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeee-CCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCC
Q 024676 15 HSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFE-GHKGAVWSCCLDANALFSASGSADFTAKLWDALTG 93 (264)
Q Consensus 15 h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~-~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~ 93 (264)
+...+.+|++.| +|+.+++.. ++.+.+|+...+... .+. .....+..+++++++.+.++...++.|.+|+..+.
T Consensus 65 ~~~~p~~i~~~~---~g~l~v~~~-~~~i~~~d~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~ 139 (270)
T 1rwi_B 65 GLYQPQGLAVDG---AGTVYVTDF-NNRVVTLAAGSNNQT-VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSK 139 (270)
T ss_dssp SCCSCCCEEECT---TCCEEEEET-TTEEEEECTTCSCCE-ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCC
T ss_pred CcCCcceeEECC---CCCEEEEcC-CCEEEEEeCCCceEe-eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCc
Confidence 334567888885 787666655 888999998765433 232 23356889999999988888788889999986655
Q ss_pred cEEEEe-ecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEE
Q 024676 94 DEKHSF-EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRL 172 (264)
Q Consensus 94 ~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~i 172 (264)
...... .....+..++++++++++++...++.|.+||....... ............+++.+++ .+.++...++.|.+
T Consensus 140 ~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~-~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~ 217 (270)
T 1rwi_B 140 TQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV-VLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVK 217 (270)
T ss_dssp SCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEE-ECCCSSCCSEEEEEECTTC-CEEEEETTTSCEEE
T ss_pred eeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceE-eecccCCCCceEEEECCCC-CEEEEECCCCcEEE
Confidence 432221 22235678899999997777777889999998654321 1111122456778877765 66666666689999
Q ss_pred EECCCCceeEEec-CCCCEEEEEEcCCCcEEEEe-CCCcEEEEECCCcee
Q 024676 173 WDARSGKIVQTLE-TKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGL 220 (264)
Q Consensus 173 wd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~-~~~~i~iwd~~~~~~ 220 (264)
||..+........ ....+..++++|+|+++++. .++.|+++++...+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 218 LLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp ECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred EcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 9997765433222 22468899999999876664 468999999865543
No 204
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.48 E-value=1.2e-09 Score=88.21 Aligned_cols=235 Identities=8% Similarity=0.005 Sum_probs=161.1
Q ss_pred ccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEE-eeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCC
Q 024676 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIG-TFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALT 92 (264)
Q Consensus 14 ~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~-~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~ 92 (264)
.....+.+|.+.+ +|+..++...++.+.+++.. ++... .+..+...+.++++++++.+.++...++.|..+|..
T Consensus 17 ~~~~~p~~i~~d~---~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~- 91 (300)
T 2qc5_A 17 IPDSGPYGITSSE---DGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK- 91 (300)
T ss_dssp STTCCEEEEEECT---TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred CCCCCcceeeECC---CCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-
Confidence 3455677888885 78888887788999999988 66543 233344678999999999888887778899999987
Q ss_pred CcEEEEee---cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCe
Q 024676 93 GDEKHSFE---HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGG 169 (264)
Q Consensus 93 ~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~ 169 (264)
+... .+. ....+..++++++++++++...++.+..+|.. ++...............+++.+++. +.++...++.
T Consensus 92 g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~ 168 (300)
T 2qc5_A 92 GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTENQNNS 168 (300)
T ss_dssp SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTE
T ss_pred CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCC-EEEEecCCCe
Confidence 5442 232 23568899999999988877667889999876 4322111222334567777776555 5555555688
Q ss_pred EEEEECCCCceeEE-ec-CCCCEEEEEEcCCCcEEEEeC-CCcEEEEECCCceeeeEEecC---CCCceeeEcCCCCCEE
Q 024676 170 VRLWDARSGKIVQT-LE-TKSPVTSAEVSRDGRYITTAD-GSSVKFWDANHFGLVKGYNMP---CNTESASLEPKLGNIF 243 (264)
Q Consensus 170 v~iwd~~~~~~~~~-~~-~~~~v~~~~~s~~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 243 (264)
|..+|. +++.... .. ....+..++++++|.+.++.. ++.|..||. +++. ..+..+ ..+..+.+.++ +.++
T Consensus 169 i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~-~~~~~~~~~~~~~~i~~d~~-g~l~ 244 (300)
T 2qc5_A 169 IGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEI-SEYDIPTPNARPHAITAGKN-SEIW 244 (300)
T ss_dssp EEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE-EEEECSSTTCCEEEEEECST-TCEE
T ss_pred EEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcE-EEEECCCCCCCceEEEECCC-CCEE
Confidence 999998 5554432 21 234588999999998777654 467999998 4332 233332 23445566664 7777
Q ss_pred EEecCCCeEEEEEcCcce
Q 024676 244 IAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 244 ~~gs~d~~v~vwd~~~g~ 261 (264)
++...++.|..||. +|+
T Consensus 245 v~~~~~~~i~~~~~-~g~ 261 (300)
T 2qc5_A 245 FTEWGANQIGRITN-DNT 261 (300)
T ss_dssp EEETTTTEEEEECT-TSC
T ss_pred EeccCCCeEEEECC-CCc
Confidence 77777788999987 443
No 205
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.47 E-value=1e-10 Score=95.57 Aligned_cols=230 Identities=11% Similarity=0.056 Sum_probs=150.4
Q ss_pred eeccCCCeeeeEeccCCCCCe-EEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeC
Q 024676 12 CHGHSRPVVDLFYSPITPDGF-FLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDA 90 (264)
Q Consensus 12 ~~~h~~~v~~~~~~~~~~~g~-~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~ 90 (264)
+..+..-..+..|+| +|+ ++++...++.+..|+. +++ ...+..+.+.+..+++++++.++++...++.|.+|+.
T Consensus 40 l~~~~~~~egp~~~~---~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~ 114 (305)
T 3dr2_A 40 LYDQATWSEGPAWWE---AQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDA 114 (305)
T ss_dssp EECCCSSEEEEEEEG---GGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred EecCCcCccCCeEeC---CCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECC
Confidence 334445556788886 776 6677778889999988 455 3455556678899999999998777667788999997
Q ss_pred CCCcEEEEeec-----CCeEEEEEECCCCCEEEE----eeC-------------CCcEEEeeCCCCCCCCeEeccCCCCe
Q 024676 91 LTGDEKHSFEH-----KHIVRACAFSEDTHLLLT----GGF-------------EKILRIFDLNRPDAPPREVGNSSGSI 148 (264)
Q Consensus 91 ~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~s----~~~-------------d~~i~~~d~~~~~~~~~~~~~~~~~i 148 (264)
. +........ ...++.+.++|++++.++ |.. .+.|..+|..+++.. ... .....
T Consensus 115 ~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~--~~~-~~~~p 190 (305)
T 3dr2_A 115 D-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQ--RMA-DLDHP 190 (305)
T ss_dssp T-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCE--EEE-EESSE
T ss_pred C-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEE--EEe-cCCCC
Confidence 5 543222211 123567899999998886 432 245666776555432 222 23345
Q ss_pred EEEEEecCCCeEEEEeeC-----CCeEEEEECCCCcee--EEe-c-CCCCEEEEEEcCCCcEEEEeCCCcEEEEECCCce
Q 024676 149 RTVAWLHSDQTILSSCTD-----SGGVRLWDARSGKIV--QTL-E-TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFG 219 (264)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~-----d~~v~iwd~~~~~~~--~~~-~-~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~ 219 (264)
..++|++++..++++... .+.|.+||+..+... ..+ . .......+++.++|++.++.. +.|.+||. .++
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~-~gv~~~~~-~g~ 268 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSG-TGVCVFDS-DGQ 268 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCS-SEEEEECT-TSC
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecC-CcEEEECC-CCC
Confidence 778898887766665444 268999998765411 111 1 122345688999999766654 45999998 566
Q ss_pred eeeEEecCCCCceeeEcCCCCCEEEEecCCCeEE
Q 024676 220 LVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVH 253 (264)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~v~ 253 (264)
.+..+..+..+...++.++ +..|..++.++..+
T Consensus 269 ~~~~~~~~~~~~~~~f~~d-~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 269 LLGHIPTPGTASNCTFDQA-QQRLFITGGPCLWM 301 (305)
T ss_dssp EEEEEECSSCCCEEEECTT-SCEEEEEETTEEEE
T ss_pred EEEEEECCCceeEEEEeCC-CCEEEEEcCCeEEE
Confidence 6777777766677778754 55555555554333
No 206
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.46 E-value=2.2e-12 Score=108.44 Aligned_cols=169 Identities=12% Similarity=0.035 Sum_probs=123.3
Q ss_pred CeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCc---------eEE-eeeCCcCCEEEEEECCCCcEEEEecCCCeEEE
Q 024676 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD---------WIG-TFEGHKGAVWSCCLDANALFSASGSADFTAKL 87 (264)
Q Consensus 18 ~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~---------~~~-~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~i 87 (264)
+++.|+.++ ...++++|+.++. .+|+....+ ... ....+.+ |..++| |+..|+.+ .++.|++
T Consensus 39 ~~nlLais~---~~gll~a~~~~~l-~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISN---SKSLFVAASGSKA-VVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEET---TTTEEEEEETTEE-EEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEE
T ss_pred cccEEEEcC---CCCEEEEeCCCEE-EEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEE
Confidence 588888886 5668899998865 458654322 111 1223556 999999 88888888 8899999
Q ss_pred EeCCCCcEEE-EeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeC
Q 024676 88 WDALTGDEKH-SFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTD 166 (264)
Q Consensus 88 wd~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 166 (264)
||+.+..... ...+..++..+.+.+.. +++++.||.+.+||+..+... . +...+.+++|+|.+ + +.+..
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~--~---~~~~Vs~v~WSpkG--~-~vg~~ 180 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTK--Q---LAQNVTSFDVTNSQ--L-AVLLK 180 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEE--E---EEESEEEEEECSSE--E-EEEET
T ss_pred EEchhhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCccc--c---ccCCceEEEEcCCc--e-EEEEc
Confidence 9998765333 33466678877766543 888999999999999765432 2 34579999999987 3 34566
Q ss_pred CCeEEEEECCCCce--eEEe------c----CCCCEEEEEEcCCCcEEEE
Q 024676 167 SGGVRLWDARSGKI--VQTL------E----TKSPVTSAEVSRDGRYITT 204 (264)
Q Consensus 167 d~~v~iwd~~~~~~--~~~~------~----~~~~v~~~~~s~~~~~l~~ 204 (264)
||.+++|+.+.+++ ...+ . +...|.++.|.++++++++
T Consensus 181 dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 181 DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 79999999988775 5555 2 3466999999999998765
No 207
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.45 E-value=3.1e-11 Score=110.44 Aligned_cols=227 Identities=11% Similarity=0.036 Sum_probs=138.3
Q ss_pred CCCCeEEEEEeCCCC---cEEEeC--C---CCceEEe-----e-eCCcCCEEEEEECCCCcEEEEecCC-----CeEEEE
Q 024676 28 TPDGFFLVSASKDSS---PMLRNG--E---TGDWIGT-----F-EGHKGAVWSCCLDANALFSASGSAD-----FTAKLW 88 (264)
Q Consensus 28 ~~~g~~l~t~s~d~~---v~i~~~--~---~~~~~~~-----~-~~H~~~V~~v~~~~~~~~l~s~s~D-----~~v~iw 88 (264)
+|+|++++-...++. ..+|-. . .++.... + .+|...+..++|+||+++++.++.+ ..|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 368888877765554 555643 3 3332221 1 2354568889999999998766544 469999
Q ss_pred eCCCCcEEEEeecCCeEEEEEECCCCCEEEEeeCCCc--------------EEEeeCCCCCCCCeEeccC---CCCeEEE
Q 024676 89 DALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKI--------------LRIFDLNRPDAPPREVGNS---SGSIRTV 151 (264)
Q Consensus 89 d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~--------------i~~~d~~~~~~~~~~~~~~---~~~i~~~ 151 (264)
|+.+++.+....+...+..+.|+|+ +.|+.++.+.. |++|++.++.......... ...+..+
T Consensus 195 dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~ 273 (741)
T 1yr2_A 195 GVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGA 273 (741)
T ss_dssp ETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred ECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEE
Confidence 9999986554222222356889999 88888877654 8889987654322222221 2247788
Q ss_pred EEecCCCeEEEEeeC----CCeEEEEECCCC--c-eeEEecCCCCEEEEEEcCCCcEEE-EeC----CCcEEEEECCCce
Q 024676 152 AWLHSDQTILSSCTD----SGGVRLWDARSG--K-IVQTLETKSPVTSAEVSRDGRYIT-TAD----GSSVKFWDANHFG 219 (264)
Q Consensus 152 ~~~~~~~~~~~~~~~----d~~v~iwd~~~~--~-~~~~~~~~~~v~~~~~s~~~~~l~-~~~----~~~i~iwd~~~~~ 219 (264)
.|++++..++.+..+ ...|.+||+.++ + .............. ++|+|..|+ .++ ...|.+||+.+..
T Consensus 274 ~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 352 (741)
T 1yr2_A 274 SVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST 352 (741)
T ss_dssp EECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS
T ss_pred EECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc
Confidence 899988877766643 248999999887 4 33222333333333 347776554 343 2358999987741
Q ss_pred -eeeEE-ecCCCC-ceeeEcCCCCCEEEEecCCCeEEEEEcC
Q 024676 220 -LVKGY-NMPCNT-ESASLEPKLGNIFIAGGEDMWVHVFDFH 258 (264)
Q Consensus 220 -~~~~~-~~~~~~-~~~~~~~~~~~~~~~gs~d~~v~vwd~~ 258 (264)
..+.+ ...... ....+. .+.++++...|+..++|.++
T Consensus 353 ~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 353 PRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp CEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEE
T ss_pred cccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEe
Confidence 22222 222221 123333 46788899999988888554
No 208
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.44 E-value=9.2e-12 Score=106.05 Aligned_cols=232 Identities=15% Similarity=0.111 Sum_probs=146.8
Q ss_pred CCCeEEEEEeC-C----CCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEec----------CCCeEEEEeCCCC
Q 024676 29 PDGFFLVSASK-D----SSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGS----------ADFTAKLWDALTG 93 (264)
Q Consensus 29 ~~g~~l~t~s~-d----~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s----------~D~~v~iwd~~~~ 93 (264)
+++..+..+.. + +.|.+.|..+++.+.++.--..+ .++++||+++++.+. .++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 56665555544 3 68999999999999888643345 799999998876654 4679999999999
Q ss_pred cEEEEeecC--------CeEEEEEECCCCCEEEEeeC--CCcEEEeeCCCCCCCCeEeccCC------CCeEEEEEecCC
Q 024676 94 DEKHSFEHK--------HIVRACAFSEDTHLLLTGGF--EKILRIFDLNRPDAPPREVGNSS------GSIRTVAWLHSD 157 (264)
Q Consensus 94 ~~~~~~~~~--------~~v~~~~~~~~~~~l~s~~~--d~~i~~~d~~~~~~~~~~~~~~~------~~i~~~~~~~~~ 157 (264)
+.+..+... .....+.++|++++++.+.. ++.+.+.|+.+.+.......... +...-+.+++++
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG 239 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDG 239 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTS
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCC
Confidence 888776532 22346789999999998874 57899999987654322211100 000011222222
Q ss_pred CeEEEEe------------------------------------eCCCeEEEEECCCCcee--EEecC-----------CC
Q 024676 158 QTILSSC------------------------------------TDSGGVRLWDARSGKIV--QTLET-----------KS 188 (264)
Q Consensus 158 ~~~~~~~------------------------------------~~d~~v~iwd~~~~~~~--~~~~~-----------~~ 188 (264)
..+++.. ...+.|.+.|..++... ..+.. ..
T Consensus 240 ~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~ 319 (426)
T 3c75_H 240 SLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPG 319 (426)
T ss_dssp SEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEEC
T ss_pred CEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccC
Confidence 2111111 12234444444333211 00000 00
Q ss_pred CEEEEEEcCCCcEE-EE-eC---------CCcEEEEECCCceeeeEEecCCCCceeeEcCCCCC-EEEEec-CCCeEEEE
Q 024676 189 PVTSAEVSRDGRYI-TT-AD---------GSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGN-IFIAGG-EDMWVHVF 255 (264)
Q Consensus 189 ~v~~~~~s~~~~~l-~~-~~---------~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~gs-~d~~v~vw 255 (264)
....+.++|+++.+ ++ .. ++.|.+.|..+++.++.+..+..+..+.+.++ ++ .+++.. .++.|.++
T Consensus 320 g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spD-g~~~lyv~n~~s~~VsVI 398 (426)
T 3c75_H 320 GWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQD-AEPLLYALSAGTQTLHIY 398 (426)
T ss_dssp SSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCS-SSCEEEEEETTTTEEEEE
T ss_pred CceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccC-CCEEEEEEcCCCCeEEEE
Confidence 11126788887643 33 21 24799999999999999988777778888886 55 555554 69999999
Q ss_pred EcCcceee
Q 024676 256 DFHTGEQI 263 (264)
Q Consensus 256 d~~~g~~i 263 (264)
|+.+++.+
T Consensus 399 D~~t~kvv 406 (426)
T 3c75_H 399 DAATGEEL 406 (426)
T ss_dssp ETTTCCEE
T ss_pred ECCCCCEE
Confidence 99999865
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.43 E-value=6.6e-10 Score=93.49 Aligned_cols=202 Identities=13% Similarity=0.030 Sum_probs=127.8
Q ss_pred eeEeccCCCCCeEEEEEe----------CCCCcEEEeCCCCceEEeeeCC-------cCCEEEEEECCCCcEEEEecC--
Q 024676 21 DLFYSPITPDGFFLVSAS----------KDSSPMLRNGETGDWIGTFEGH-------KGAVWSCCLDANALFSASGSA-- 81 (264)
Q Consensus 21 ~~~~~~~~~~g~~l~t~s----------~d~~v~i~~~~~~~~~~~~~~H-------~~~V~~v~~~~~~~~l~s~s~-- 81 (264)
.++++| ||++|..+. .++.+.++|..+++.++++.-- ...-..++|+||+++++.++.
T Consensus 70 ~i~~sp---Dg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~ 146 (373)
T 2mad_H 70 NPVAAH---SGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA 146 (373)
T ss_pred CeEECC---CCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCC
Confidence 788885 999988886 3678999999998887766421 122357899999999887764
Q ss_pred CCeEEEEeCCCCcEEEE-eecCCeEEEEEECCCC-CEEEEeeCCCc----------------------------------
Q 024676 82 DFTAKLWDALTGDEKHS-FEHKHIVRACAFSEDT-HLLLTGGFEKI---------------------------------- 125 (264)
Q Consensus 82 D~~v~iwd~~~~~~~~~-~~~~~~v~~~~~~~~~-~~l~s~~~d~~---------------------------------- 125 (264)
+..|.++| .+++.+.. +.....+ .+.|.+ +.+++.+.|+.
T Consensus 147 ~~~v~viD-~t~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~ 222 (373)
T 2mad_H 147 GPAVGLVV-QGGSSDDQLLSSPTCY---HIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQAN 222 (373)
T ss_pred CCeEEEEE-CCCCEEeEEcCCCceE---EEEeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEe
Confidence 57899999 99987777 6543321 111211 12222233333
Q ss_pred -------------EEEeeCCCCCCCC-eEec----------cCCCCeEEEEEecCCCeEEEEee---------CCCeEEE
Q 024676 126 -------------LRIFDLNRPDAPP-REVG----------NSSGSIRTVAWLHSDQTILSSCT---------DSGGVRL 172 (264)
Q Consensus 126 -------------i~~~d~~~~~~~~-~~~~----------~~~~~i~~~~~~~~~~~~~~~~~---------~d~~v~i 172 (264)
+.+.|+....... ..+. ........+.+.+++..++++.. ..+.|.+
T Consensus 223 ~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~V 302 (373)
T 2mad_H 223 KSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTS 302 (373)
T ss_pred cCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEE
Confidence 3333332211000 0000 00111222455665565555443 1357999
Q ss_pred EECCCCceeEEecCCCCEEEEEEcCCCc-EEEEeC--CCcEEEEECCCceeeeEE-ecCCC
Q 024676 173 WDARSGKIVQTLETKSPVTSAEVSRDGR-YITTAD--GSSVKFWDANHFGLVKGY-NMPCN 229 (264)
Q Consensus 173 wd~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~--~~~i~iwd~~~~~~~~~~-~~~~~ 229 (264)
+|+.+++.+..+........+.++|||+ ++.++. ++.|.++|..+++.++.. .....
T Consensus 303 ID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~~vG~~ 363 (373)
T 2mad_H 303 VTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSG 363 (373)
T ss_pred EECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeeecCCCCC
Confidence 9999999988887766788999999998 554443 689999999999988773 44333
No 210
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.41 E-value=5.9e-11 Score=99.55 Aligned_cols=228 Identities=15% Similarity=0.149 Sum_probs=152.0
Q ss_pred CCCeEEEEEeC-----CCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEec----------CCCeEEEEeCCCC
Q 024676 29 PDGFFLVSASK-----DSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGS----------ADFTAKLWDALTG 93 (264)
Q Consensus 29 ~~g~~l~t~s~-----d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s----------~D~~v~iwd~~~~ 93 (264)
|+++.+..... ++.+.+.|..+++.+.++..-..+ . ++++||+++++.++ .+++|.+||..++
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~ 119 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL 119 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 68877777765 678999999999999888744445 4 99999999876654 4678999999999
Q ss_pred cEEEEeecCC--------eEEEEEECCCCCEEEEeeC--CCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEE
Q 024676 94 DEKHSFEHKH--------IVRACAFSEDTHLLLTGGF--EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (264)
Q Consensus 94 ~~~~~~~~~~--------~v~~~~~~~~~~~l~s~~~--d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 163 (264)
+.+..+.... ....+.++|++++++.+.. ++.+.++|+.+.+...... . .+. ....|.+...+++
T Consensus 120 ~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~-v-~g~---~~~~P~g~~~~~~ 194 (386)
T 3sjl_D 120 LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLD-V-PDC---YHIFPTAPDTFFM 194 (386)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE-C-CSE---EEEEEEETTEEEE
T ss_pred eEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEE-C-CCc---ceeecCCCceeEE
Confidence 9888775321 3456889999999998864 6899999998765433221 1 111 1223444434445
Q ss_pred eeCCCeEEEEECCC-CceeEEec-C----CCCEE-EEEE-cCCCcEEEEeCCCcEEEEECCCce--eeeEEec-------
Q 024676 164 CTDSGGVRLWDARS-GKIVQTLE-T----KSPVT-SAEV-SRDGRYITTADGSSVKFWDANHFG--LVKGYNM------- 226 (264)
Q Consensus 164 ~~~d~~v~iwd~~~-~~~~~~~~-~----~~~v~-~~~~-s~~~~~l~~~~~~~i~iwd~~~~~--~~~~~~~------- 226 (264)
.+.||++-+.++.+ ++...... . ..++. ...| .++|+++..+.++.+.+.|+.... .++.+..
T Consensus 195 ~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~ 274 (386)
T 3sjl_D 195 HCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERA 274 (386)
T ss_dssp EETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHH
T ss_pred ECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceecccccccc
Confidence 55679999999986 66533221 1 12222 2344 478877667777899999996553 4444431
Q ss_pred ----CCCCceeeEcCCCCCEEEEecC---------CCeEEEEEcCcceee
Q 024676 227 ----PCNTESASLEPKLGNIFIAGGE---------DMWVHVFDFHTGEQI 263 (264)
Q Consensus 227 ----~~~~~~~~~~~~~~~~~~~gs~---------d~~v~vwd~~~g~~i 263 (264)
+.......+++..++++++-.. ...|.+.|+++++.+
T Consensus 275 ~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~ 324 (386)
T 3sjl_D 275 DGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERL 324 (386)
T ss_dssp TTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE
T ss_pred ccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEE
Confidence 1222335556665666666432 357999999998865
No 211
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.40 E-value=2.7e-09 Score=88.05 Aligned_cols=221 Identities=10% Similarity=0.027 Sum_probs=143.6
Q ss_pred eeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEEEe
Q 024676 20 VDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSF 99 (264)
Q Consensus 20 ~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 99 (264)
-+..|+| .++..+++...++.+..|+..+++.. .+. +...+.++++++++.++++. .+ -|.+||..+++.....
T Consensus 52 egp~~~~--~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 52 EGPTFDP--ASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHA 125 (326)
T ss_dssp EEEEEET--TTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEE
T ss_pred cCCeEeC--CCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEe
Confidence 4678886 23567778878889999999877643 232 34578999999999887765 34 4899998887754333
Q ss_pred ec-----CCeEEEEEECCCCCEEEEeeCC----CcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeE
Q 024676 100 EH-----KHIVRACAFSEDTHLLLTGGFE----KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGV 170 (264)
Q Consensus 100 ~~-----~~~v~~~~~~~~~~~l~s~~~d----~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v 170 (264)
.. ...++.+.++|+++++++...+ ....+|.+++++. ............++|++++..++++...++.|
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~~--~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I 203 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKV--TKLFADISIPNSICFSPDGTTGYFVDTKVNRL 203 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEE--EEEEEEESSEEEEEECTTSCEEEEEETTTCEE
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCcE--EEeeCCCcccCCeEEcCCCCEEEEEECCCCEE
Confidence 21 2358899999999977755421 2233443332321 22212223456788988877776666667899
Q ss_pred EEEECC--CC-ce-----eEEec-CCCCEEEEEEcCCCcEEEEe-CCCcEEEEECCCceeeeEEecCCC-CceeeEc-CC
Q 024676 171 RLWDAR--SG-KI-----VQTLE-TKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMPCN-TESASLE-PK 238 (264)
Q Consensus 171 ~iwd~~--~~-~~-----~~~~~-~~~~v~~~~~s~~~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~-~~ 238 (264)
.+||+. ++ +. +..+. ....+..+++.++|.+.++. .++.|..||. +++.+..+..+.. +..+++. ++
T Consensus 204 ~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d 282 (326)
T 2ghs_A 204 MRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPD 282 (326)
T ss_dssp EEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTT
T ss_pred EEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCC
Confidence 999986 55 31 22222 22346789999999876665 4578999998 5666777776653 4566676 54
Q ss_pred CCCEEEEecCC
Q 024676 239 LGNIFIAGGED 249 (264)
Q Consensus 239 ~~~~~~~gs~d 249 (264)
.+.++++...+
T Consensus 283 ~~~L~vt~~~~ 293 (326)
T 2ghs_A 283 ASRLLVTSARE 293 (326)
T ss_dssp SCEEEEEEBCT
T ss_pred CCEEEEEecCC
Confidence 34455555444
No 212
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.40 E-value=5.2e-09 Score=84.36 Aligned_cols=230 Identities=7% Similarity=0.014 Sum_probs=152.8
Q ss_pred cCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEE-eeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCC
Q 024676 15 HSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIG-TFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTG 93 (264)
Q Consensus 15 h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~-~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~ 93 (264)
+...+.+|++.+ +|++.++...++.+..++.. ++... .+......+..+++++++.+.++...++.|..+|.. +
T Consensus 60 ~~~~~~~i~~~~---~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 134 (300)
T 2qc5_A 60 PDAKVMCLIVSS---LGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-G 134 (300)
T ss_dssp TTCCEEEEEECT---TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-S
T ss_pred CCCcceeEEECC---CCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-C
Confidence 345677888874 78877777777889999987 66432 222244678999999999888887778899999987 5
Q ss_pred cEEEE-ee-cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEE
Q 024676 94 DEKHS-FE-HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVR 171 (264)
Q Consensus 94 ~~~~~-~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~ 171 (264)
..... .. ....+..+++++++++.++...++.+..++. +++............+..+++.+++ .+.++....+.|.
T Consensus 135 ~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~ 212 (300)
T 2qc5_A 135 TIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDG-ALWFVEIMGNKIG 212 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEE
T ss_pred CEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCC-CEEEEccCCCEEE
Confidence 44322 22 2356789999999997776666788999987 3332211111223456777777654 5555555557899
Q ss_pred EEECCCCceeEE-ec-CCCCEEEEEEcCCCcEEEEeC-CCcEEEEECCCceeeeEEecC---CCCceeeEcCCCCCEEEE
Q 024676 172 LWDARSGKIVQT-LE-TKSPVTSAEVSRDGRYITTAD-GSSVKFWDANHFGLVKGYNMP---CNTESASLEPKLGNIFIA 245 (264)
Q Consensus 172 iwd~~~~~~~~~-~~-~~~~v~~~~~s~~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 245 (264)
+||. +++.... .. ....+..++++++|++.++.. ++.|..||.. ++ +..+..+ ..+..+...+ .|.++++
T Consensus 213 ~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~-~~~~~~~~~~~~~~~i~~~~-~g~l~v~ 288 (300)
T 2qc5_A 213 RITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND-NT-IQEYQLQTENAEPHGITFGK-DGSVWFA 288 (300)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SC-EEEEECCSTTCCCCCEEECT-TSCEEEE
T ss_pred EEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC-Cc-EEEEECCccCCccceeEeCC-CCCEEEE
Confidence 9998 5554332 22 235588999999998776654 5789999983 33 3345443 3345566666 4776666
Q ss_pred ecCCCeEEEEEc
Q 024676 246 GGEDMWVHVFDF 257 (264)
Q Consensus 246 gs~d~~v~vwd~ 257 (264)
.. + .|..+|.
T Consensus 289 ~~-~-~i~~~~p 298 (300)
T 2qc5_A 289 LK-C-KIGKLNL 298 (300)
T ss_dssp CS-S-EEEEEEE
T ss_pred cc-C-ceEEeCC
Confidence 55 4 6777764
No 213
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.40 E-value=1.3e-11 Score=103.84 Aligned_cols=169 Identities=13% Similarity=0.057 Sum_probs=122.0
Q ss_pred CEEEEEECCCCcEEEEecCCCeEEEEeCCCCc-----------EEEEeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeC
Q 024676 63 AVWSCCLDANALFSASGSADFTAKLWDALTGD-----------EKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDL 131 (264)
Q Consensus 63 ~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~ 131 (264)
++..++++++..++++|+.|+ +++|++.... .....++.. |+.++| ++++|+++ .++.+++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 688899999999999998885 6669854322 223445677 999999 88899888 8899999998
Q ss_pred CCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEecCCCCEEEEEEcCCCcEEEEeCCCcEE
Q 024676 132 NRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTADGSSVK 211 (264)
Q Consensus 132 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~ 211 (264)
++... ......+...+..+.+.++. ++.+..||.|.+||+.+++... ....|.+++|||+| ..++..++.++
T Consensus 114 ~sl~~-~~~~~~~~~~v~~i~~~~p~---~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG-~~vg~~dg~i~ 185 (388)
T 1xip_A 114 EELSE-FRTVTSFEKPVFQLKNVNNT---LVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ-LAVLLKDRSFQ 185 (388)
T ss_dssp SSTTC-EEEEEECSSCEEEEEECSSE---EEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE-EEEEETTSCEE
T ss_pred hhhhc-cCccceeecceeeEEecCCC---EEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc-eEEEEcCCcEE
Confidence 76542 22333455667777776553 5566788999999999887654 23479999999999 55667789999
Q ss_pred EEECCCcee--eeEEe----------cCCCCceeeEcCCCCCEEEE
Q 024676 212 FWDANHFGL--VKGYN----------MPCNTESASLEPKLGNIFIA 245 (264)
Q Consensus 212 iwd~~~~~~--~~~~~----------~~~~~~~~~~~~~~~~~~~~ 245 (264)
+|+...++. .+.+. ......++.+.++ +.++++
T Consensus 186 ~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~-~~flv~ 230 (388)
T 1xip_A 186 SFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSP-QDFLAV 230 (388)
T ss_dssp EEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSS-SEEEEE
T ss_pred EEcCCCccccccceecCCcccccccCCCeeEEEEEEecC-CeEEEE
Confidence 998877764 44441 1233456677764 566665
No 214
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.38 E-value=3.8e-11 Score=100.55 Aligned_cols=225 Identities=8% Similarity=-0.054 Sum_probs=145.8
Q ss_pred CeEEEEEeCCC----CcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEec----------CCCeEEEEeCCCCcEE
Q 024676 31 GFFLVSASKDS----SPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGS----------ADFTAKLWDALTGDEK 96 (264)
Q Consensus 31 g~~l~t~s~d~----~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s----------~D~~v~iwd~~~~~~~ 96 (264)
.+..++-..++ .+.+.|..+++.+.++..-..+ .+.++||+++++.+. .+++|.+||..+++.+
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv 109 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI 109 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEE
T ss_pred CeEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEE
Confidence 34556666566 6679999999999988643345 699999998887664 4789999999999988
Q ss_pred EEeecC--------CeEEEEEECCCCCEEEEeeC--CCcEEE--eeCCCCCCCCeEeccC------------------CC
Q 024676 97 HSFEHK--------HIVRACAFSEDTHLLLTGGF--EKILRI--FDLNRPDAPPREVGNS------------------SG 146 (264)
Q Consensus 97 ~~~~~~--------~~v~~~~~~~~~~~l~s~~~--d~~i~~--~d~~~~~~~~~~~~~~------------------~~ 146 (264)
.+++.. .....+.++|++++++.+.. ...+.+ +|+.+ ...+... .+
T Consensus 110 ~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t----v~~i~v~~~~~~~p~g~~~~~~~~~dg 185 (368)
T 1mda_H 110 ADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD----DQLTKSASCFHIHPGAAATHYLGSCPA 185 (368)
T ss_dssp EEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE----EEEEECSSCCCCEEEETTEEECCCCTT
T ss_pred EEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh----ceEEECCCceEEccCCCeEEEEEcCCC
Confidence 887643 23457889999999998875 467888 88754 1111000 00
Q ss_pred CeEEEEE--------------------------ecCCCeEEEEeeCCCeEEEEECCCCc--eeEEecCC-----------
Q 024676 147 SIRTVAW--------------------------LHSDQTILSSCTDSGGVRLWDARSGK--IVQTLETK----------- 187 (264)
Q Consensus 147 ~i~~~~~--------------------------~~~~~~~~~~~~~d~~v~iwd~~~~~--~~~~~~~~----------- 187 (264)
.+..+.. .++++.++.+. . +.|.+.|+.++. .+..+...
T Consensus 186 ~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs-~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p 263 (368)
T 1mda_H 186 SLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAV-A-SSILQGDIPAAGATMKAAIDGNESGRKADNFRS 263 (368)
T ss_dssp SCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECB-S-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEE
T ss_pred CEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEc-C-CEEEEEECCCCcceEEEEEEecccccccccccc
Confidence 0000100 12222222221 2 556666665432 22222110
Q ss_pred CCEEEEEEcCCCcEEE-EeC---------CCcEEEEECCCceeeeEEecCCCCceeeEcCCCCCEEEEec-CCCeEEEEE
Q 024676 188 SPVTSAEVSRDGRYIT-TAD---------GSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGG-EDMWVHVFD 256 (264)
Q Consensus 188 ~~v~~~~~s~~~~~l~-~~~---------~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs-~d~~v~vwd 256 (264)
.....+.++|+++.+. +.. +..+.++|+.+++.+..+..+..+..+.+.++..+++++.. .++.|.++|
T Consensus 264 ~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID 343 (368)
T 1mda_H 264 AGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYD 343 (368)
T ss_dssp CSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred CcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEE
Confidence 0111267999986543 322 23567999999999998887767778888886445777777 699999999
Q ss_pred cCcceee
Q 024676 257 FHTGEQI 263 (264)
Q Consensus 257 ~~~g~~i 263 (264)
+.+++.+
T Consensus 344 ~~t~kvv 350 (368)
T 1mda_H 344 AASDQDQ 350 (368)
T ss_dssp SSSCEEE
T ss_pred CCCCcEE
Confidence 9999875
No 215
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.32 E-value=4.9e-10 Score=101.43 Aligned_cols=232 Identities=12% Similarity=0.076 Sum_probs=149.7
Q ss_pred CeEEEEEeCCCCcEEEeCCCCceEEeeeCC-c----CCEEEEEECCCCcEEEEec-----CCCeEEEEeCCCCcEEEEee
Q 024676 31 GFFLVSASKDSSPMLRNGETGDWIGTFEGH-K----GAVWSCCLDANALFSASGS-----ADFTAKLWDALTGDEKHSFE 100 (264)
Q Consensus 31 g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H-~----~~V~~v~~~~~~~~l~s~s-----~D~~v~iwd~~~~~~~~~~~ 100 (264)
+..|+.++.|+.+..+|..+|+.+-.+..+ . ..+.+.-...++..++..+ .++.|+.+|..+|+.+..+.
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 457788899999999999999877666543 1 1111100111344433332 27999999999999887765
Q ss_pred cCCe---------------------------------EEEEEECCCCCEEEEeeCCC-------------------cEEE
Q 024676 101 HKHI---------------------------------VRACAFSEDTHLLLTGGFEK-------------------ILRI 128 (264)
Q Consensus 101 ~~~~---------------------------------v~~~~~~~~~~~l~s~~~d~-------------------~i~~ 128 (264)
...+ ...+.++|++.+++.++.++ .+..
T Consensus 208 ~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~A 287 (677)
T 1kb0_A 208 SVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVA 287 (677)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEE
T ss_pred cCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEE
Confidence 3211 12467888888888876653 4888
Q ss_pred eeCCCCCCCCeEeccCC--------CCeEEEEEecCCC--eEEEEeeCCCeEEEEECCCCceeEEecCC-----------
Q 024676 129 FDLNRPDAPPREVGNSS--------GSIRTVAWLHSDQ--TILSSCTDSGGVRLWDARSGKIVQTLETK----------- 187 (264)
Q Consensus 129 ~d~~~~~~~~~~~~~~~--------~~i~~~~~~~~~~--~~~~~~~~d~~v~iwd~~~~~~~~~~~~~----------- 187 (264)
+|.++++........+. .....+....++. ..++.++.+|.+.++|.++|+.+..+...
T Consensus 288 lD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~ 367 (677)
T 1kb0_A 288 LDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKH 367 (677)
T ss_dssp ECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTT
T ss_pred EECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCC
Confidence 99988876655432211 1111222222332 46777788899999999999988765421
Q ss_pred -CCE------------------------EEEEEcCCCcEE-EEeC-----------------------------------
Q 024676 188 -SPV------------------------TSAEVSRDGRYI-TTAD----------------------------------- 206 (264)
Q Consensus 188 -~~v------------------------~~~~~s~~~~~l-~~~~----------------------------------- 206 (264)
.++ ..++++|+..++ +...
T Consensus 368 g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 447 (677)
T 1kb0_A 368 GKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFN 447 (677)
T ss_dssp SCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEEC
T ss_pred CceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccc
Confidence 011 145788876554 3221
Q ss_pred --------CCcEEEEECCCceeeeEEecCCCCceeeEcCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 207 --------GSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 207 --------~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
.+.|..||+.+++.+-.+..........+.. .+.+++.++.|+.+++||.++|+++
T Consensus 448 ~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~-~g~~v~~g~~dg~l~a~D~~tG~~l 511 (677)
T 1kb0_A 448 AEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTT-AGNVVFQGTADGRLVAYHAATGEKL 511 (677)
T ss_dssp SSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEe-CCCEEEEECCCCcEEEEECCCCcee
Confidence 1578999999998876666544333333433 3567777899999999999999975
No 216
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.31 E-value=3e-09 Score=90.62 Aligned_cols=195 Identities=14% Similarity=0.138 Sum_probs=132.0
Q ss_pred CCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEEeeCCC--cEEEeeCCCCCCCCe
Q 024676 62 GAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEK--ILRIFDLNRPDAPPR 139 (264)
Q Consensus 62 ~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~--~i~~~d~~~~~~~~~ 139 (264)
.....++|++++.++++...++.|+.||..++............. ++++|+++.|+++..++ .|..++...+.. ..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~-~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA-PT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC-EE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce-eE
Confidence 356889999999988888888999999998876655544333344 89999999998888765 788888754432 12
Q ss_pred Ee----ccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEE----ecCCC---CEEEEEEcCC-CcEEEEeC-
Q 024676 140 EV----GNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQT----LETKS---PVTSAEVSRD-GRYITTAD- 206 (264)
Q Consensus 140 ~~----~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~----~~~~~---~v~~~~~s~~-~~~l~~~~- 206 (264)
.. .........+++.+.++.+++ +..++.|..||..++..... ..... |.+.++++|+ +.++++..
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 22 112345567788776677666 45568999999988764322 11111 1238999995 66555543
Q ss_pred CCcEEEEECCCceeeeEEecC----------------CCCceeeEcCCCCCEEEEec-CCCeEEEEEcCccee
Q 024676 207 GSSVKFWDANHFGLVKGYNMP----------------CNTESASLEPKLGNIFIAGG-EDMWVHVFDFHTGEQ 262 (264)
Q Consensus 207 ~~~i~iwd~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~gs-~d~~v~vwd~~~g~~ 262 (264)
.+.|+.|+.... +..+... ..+..+++.++ +.++++-+ .+..|+.|++.+|+.
T Consensus 288 ~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~d-G~lyvad~~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 288 LSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDED-GNFYIVDGFKGYCLRKLDILDGYV 357 (409)
T ss_dssp TTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTT-CCEEEEETTTTCEEEEEETTTTEE
T ss_pred CCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCC-CCEEEEeCCCCCEEEEEECCCCEE
Confidence 578999987643 2222111 12445667764 78888988 899999999777764
No 217
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.31 E-value=1.4e-12 Score=109.80 Aligned_cols=191 Identities=11% Similarity=0.027 Sum_probs=109.5
Q ss_pred CCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEEEeecCC--eEEE
Q 024676 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKH--IVRA 107 (264)
Q Consensus 30 ~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~--~v~~ 107 (264)
++..|++++.|+.+..||..+|+.+-.+.. +.+.+..+..++..+++++.|+.++.||..+++.+..++... .+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 567889999999999999999998766665 455555556677777888999999999998888766554221 1100
Q ss_pred EEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEecCC
Q 024676 108 CAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK 187 (264)
Q Consensus 108 ~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~ 187 (264)
...-..+..+++++.|+.+..||.++++......... . ...+|.++.++ .++.++.|..||.++|+.+..+...
T Consensus 86 sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~--~---~~~~p~~~~v~-~~~~dg~v~a~d~~tG~~~W~~~~~ 159 (369)
T 2hz6_A 86 SPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF--A---DSLSPSTSLLY-LGRTEYTITMYDTKTRELRWNATYF 159 (369)
T ss_dssp CSCC-----CCCCEEEEEEEEECCC---------------------------EE-EEEEEEEEECCCSSSSSCCCEEEEE
T ss_pred CceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC--c---ccccccCCEEE-EEecCCEEEEEECCCCCEEEeEecc
Confidence 0000134567888889999999999887655443221 1 22344444444 4556699999999999877655421
Q ss_pred CCEEEEEEcCC----CcEEEEeCCCcEEEEECCCceeeeEEecCCC
Q 024676 188 SPVTSAEVSRD----GRYITTADGSSVKFWDANHFGLVKGYNMPCN 229 (264)
Q Consensus 188 ~~v~~~~~s~~----~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~ 229 (264)
. .....++++ +.+++++.++.+..||.++++.+-.+.....
T Consensus 160 ~-~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~p 204 (369)
T 2hz6_A 160 D-YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASP 204 (369)
T ss_dssp E-ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSC
T ss_pred c-ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCc
Confidence 1 112223332 5677777889999999999988766665433
No 218
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.30 E-value=1.2e-09 Score=88.98 Aligned_cols=196 Identities=9% Similarity=0.088 Sum_probs=128.3
Q ss_pred cCCCeeeeEeccCCCC-CeEEEEEeCCCCcEEEeCCCCceEEe-eeC----CcCCEEEEEECCCCcEEEEecCC------
Q 024676 15 HSRPVVDLFYSPITPD-GFFLVSASKDSSPMLRNGETGDWIGT-FEG----HKGAVWSCCLDANALFSASGSAD------ 82 (264)
Q Consensus 15 h~~~v~~~~~~~~~~~-g~~l~t~s~d~~v~i~~~~~~~~~~~-~~~----H~~~V~~v~~~~~~~~l~s~s~D------ 82 (264)
+...+.+++++| + |+++++... ..+.+|+.. ++.... ... +...+..+++++++.+.++...+
T Consensus 69 ~~~~~~~i~~~~---~~g~l~v~~~~-~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~ 143 (314)
T 1pjx_A 69 YGGIPAGCQCDR---DANQLFVADMR-LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPAD 143 (314)
T ss_dssp EECCEEEEEECS---SSSEEEEEETT-TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSC
T ss_pred CCCCCceEEEec---CCCcEEEEECC-CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCccccccc
Confidence 456678898885 7 776655543 467889988 765433 221 22457899999999887776655
Q ss_pred ---------CeEEEEeCCCCcEEEEeecCCeEEEEEEC----CCCCEEEEe-eCCCcEEEeeCC-CCCCC----CeEecc
Q 024676 83 ---------FTAKLWDALTGDEKHSFEHKHIVRACAFS----EDTHLLLTG-GFEKILRIFDLN-RPDAP----PREVGN 143 (264)
Q Consensus 83 ---------~~v~iwd~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~s~-~~d~~i~~~d~~-~~~~~----~~~~~~ 143 (264)
+.|..||.. +.......+......++++ |+++.++.+ ..++.|.+|+++ .+... ......
T Consensus 144 ~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~ 222 (314)
T 1pjx_A 144 YTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPG 222 (314)
T ss_dssp CCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCC
T ss_pred ccccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCC
Confidence 466667765 5444433444456788999 998665544 567899999975 22211 011111
Q ss_pred CC-CCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEecCC-CCEEEEEEcCCCc-EEEEeC-CCcEEEEECCC
Q 024676 144 SS-GSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK-SPVTSAEVSRDGR-YITTAD-GSSVKFWDANH 217 (264)
Q Consensus 144 ~~-~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~-~~v~~~~~s~~~~-~l~~~~-~~~i~iwd~~~ 217 (264)
.. .....+++.+++ .+.++...++.|.+||.++++.+..+... ..+.+++++|+++ ++++.. ++.|..|++..
T Consensus 223 ~~~~~p~~i~~d~~G-~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 223 THEGGADGMDFDEDN-NLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CSSCEEEEEEEBTTC-CEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCCCCceEECCCC-CEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 11 446677777655 56666556689999999978766655443 5688999999998 444443 46888888754
No 219
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.29 E-value=2e-09 Score=97.59 Aligned_cols=232 Identities=13% Similarity=0.106 Sum_probs=147.9
Q ss_pred CeEEEEEeCCCCcEEEeCCCCceEEeeeC--CcCCEEEEEECC---CCcEEEEec-----CCCeEEEEeCCCCcEEEEee
Q 024676 31 GFFLVSASKDSSPMLRNGETGDWIGTFEG--HKGAVWSCCLDA---NALFSASGS-----ADFTAKLWDALTGDEKHSFE 100 (264)
Q Consensus 31 g~~l~t~s~d~~v~i~~~~~~~~~~~~~~--H~~~V~~v~~~~---~~~~l~s~s-----~D~~v~iwd~~~~~~~~~~~ 100 (264)
+..|+.++.|+.+.-+|..+|+.+-.+.. +......+..+| ++..++..+ .|+.|..||..+|+.+..+.
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 45678889999999999999987644432 111111111112 455444332 37899999999999887764
Q ss_pred cC--C------------------------------eEEEEEECCCCCEEEEeeCCCc-------------------EEEe
Q 024676 101 HK--H------------------------------IVRACAFSEDTHLLLTGGFEKI-------------------LRIF 129 (264)
Q Consensus 101 ~~--~------------------------------~v~~~~~~~~~~~l~s~~~d~~-------------------i~~~ 129 (264)
.. . ......++|+..+++.++.++. +..+
T Consensus 201 ~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~Al 280 (689)
T 1yiq_A 201 TVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAV 280 (689)
T ss_dssp SSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEE
T ss_pred ccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 21 0 0124678888889998877653 8999
Q ss_pred eCCCCCCCCeEecc-CC-------CCeEEEEEecCCC--eEEEEeeCCCeEEEEECCCCceeEEecCCC-----------
Q 024676 130 DLNRPDAPPREVGN-SS-------GSIRTVAWLHSDQ--TILSSCTDSGGVRLWDARSGKIVQTLETKS----------- 188 (264)
Q Consensus 130 d~~~~~~~~~~~~~-~~-------~~i~~~~~~~~~~--~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~----------- 188 (264)
|.++++........ +. .+........++. ..++.++.+|.+.++|.++|+.+.......
T Consensus 281 D~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~ 360 (689)
T 1yiq_A 281 NADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKT 360 (689)
T ss_dssp ETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTT
T ss_pred EccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccC
Confidence 99988876654432 11 1121111111222 256677888999999999999874332110
Q ss_pred -----------------------------CEEEEEEcCCCcEEEEe-C--------------------------------
Q 024676 189 -----------------------------PVTSAEVSRDGRYITTA-D-------------------------------- 206 (264)
Q Consensus 189 -----------------------------~v~~~~~s~~~~~l~~~-~-------------------------------- 206 (264)
....++++|+..++... .
T Consensus 361 ~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p 440 (689)
T 1yiq_A 361 GRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMP 440 (689)
T ss_dssp TEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCC
T ss_pred CCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccC
Confidence 01125677775543321 1
Q ss_pred -------------CCcEEEEECCCceeeeEEecCCCCceeeEcCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 207 -------------GSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 207 -------------~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
++.|.-||+.+++.+-.+..+.......+.. .+.+++.|+.|+.++.||.++|+++
T Consensus 441 ~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~t-agglvf~gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 441 EGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLST-AGNLVFEGSADGRVIAYAADTGEKL 509 (689)
T ss_dssp SSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceE-CCCEEEEECCCCcEEEEECCCCccc
Confidence 2568999999998876666554333333433 3667888999999999999999986
No 220
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.27 E-value=1.1e-09 Score=93.33 Aligned_cols=206 Identities=15% Similarity=0.073 Sum_probs=132.1
Q ss_pred eeEeccCCCCCeEEEEEe----------CCCCcEEEeCCCCceEEeeeCC-------cCCEEEEEECCCCcEEEEecC--
Q 024676 21 DLFYSPITPDGFFLVSAS----------KDSSPMLRNGETGDWIGTFEGH-------KGAVWSCCLDANALFSASGSA-- 81 (264)
Q Consensus 21 ~~~~~~~~~~g~~l~t~s----------~d~~v~i~~~~~~~~~~~~~~H-------~~~V~~v~~~~~~~~l~s~s~-- 81 (264)
.++++| ||++|..+. .++.|.++|..+++.++++.-- ...-..++|+||+++++.+..
T Consensus 122 gia~Sp---Dgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~ 198 (426)
T 3c75_H 122 HPVAAE---DGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSP 198 (426)
T ss_dssp EEEECT---TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSS
T ss_pred ceEECC---CCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCC
Confidence 788885 998887776 4678999999999988776411 122346789999999877653
Q ss_pred CCeEEEEeCCCCcEEEEeecCCeE--------EEEEECCCCCEEEEee--------------------------------
Q 024676 82 DFTAKLWDALTGDEKHSFEHKHIV--------RACAFSEDTHLLLTGG-------------------------------- 121 (264)
Q Consensus 82 D~~v~iwd~~~~~~~~~~~~~~~v--------~~~~~~~~~~~l~s~~-------------------------------- 121 (264)
+++|-+.|+.+++.+..+.....+ ..+.+++++++++...
T Consensus 199 ~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~ 278 (426)
T 3c75_H 199 APAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGR 278 (426)
T ss_dssp SCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCE
T ss_pred CCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCE
Confidence 679999999999877776543221 0123334444333322
Q ss_pred -----CCCcEEEeeCCCCCCC--Ce-Eec--------cCCCCeEEEEEecCCCeEEEEeeC---------CCeEEEEECC
Q 024676 122 -----FEKILRIFDLNRPDAP--PR-EVG--------NSSGSIRTVAWLHSDQTILSSCTD---------SGGVRLWDAR 176 (264)
Q Consensus 122 -----~d~~i~~~d~~~~~~~--~~-~~~--------~~~~~i~~~~~~~~~~~~~~~~~~---------d~~v~iwd~~ 176 (264)
..+.+.+.|+...... .. ... ........+++.+++..++++... .+.|.+.|+.
T Consensus 279 ~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~ 358 (426)
T 3c75_H 279 LVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAE 358 (426)
T ss_dssp EEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETT
T ss_pred EEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECC
Confidence 2233333333211100 00 000 000011124667776766665431 2579999999
Q ss_pred CCceeEEecCCCCEEEEEEcCCCc-EEEEeC--CCcEEEEECCCceeeeEE-ecCCC
Q 024676 177 SGKIVQTLETKSPVTSAEVSRDGR-YITTAD--GSSVKFWDANHFGLVKGY-NMPCN 229 (264)
Q Consensus 177 ~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~--~~~i~iwd~~~~~~~~~~-~~~~~ 229 (264)
+++.+..+........+.++|||+ ++.+.. ++.|.++|+.+++.++++ .....
T Consensus 359 T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI~~vG~~ 415 (426)
T 3c75_H 359 TGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSVDQLGRG 415 (426)
T ss_dssp TCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCSSS
T ss_pred CCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEecCCCCC
Confidence 999998887655688899999998 665443 689999999999999887 44433
No 221
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.27 E-value=1.4e-12 Score=109.71 Aligned_cols=186 Identities=12% Similarity=0.028 Sum_probs=99.1
Q ss_pred CCcEEEEecCCCeEEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEE
Q 024676 72 NALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTV 151 (264)
Q Consensus 72 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~ 151 (264)
++..+++++.|+.|..||..+|+.+..++. .++....+..+++++++++.|+.++.||..+++............+...
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~s 86 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQAS 86 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccC
Confidence 467788899999999999999998888776 5554444556777888888999999999987765433211100000000
Q ss_pred EEecCCCeEEEEeeCCCeEEEEECCCCceeEEecCCCCEEEEEEcCCCcE-EEEeCCCcEEEEECCCceeeeEEecCCCC
Q 024676 152 AWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRY-ITTADGSSVKFWDANHFGLVKGYNMPCNT 230 (264)
Q Consensus 152 ~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~~~i~iwd~~~~~~~~~~~~~~~~ 230 (264)
-....++. +.+++.++.|..||.++|+.+..+..... ...+|++.. ++++.++.|+.||.++++.+-.+.....
T Consensus 87 p~~~~~~~-v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~- 161 (369)
T 2hz6_A 87 PCRSSDGI-LYMGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFDY- 161 (369)
T ss_dssp SCC------CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEEE-
T ss_pred ceEecCCE-EEEEeCCCEEEEEECCCCcEEEEecCCCc---ccccccCCEEEEEecCCEEEEEECCCCCEEEeEecccc-
Confidence 00112333 44455668999999999998877655432 234566544 4556678999999998876554443211
Q ss_pred ceeeEcCC--CCCEEEEecCCCeEEEEEcCcceee
Q 024676 231 ESASLEPK--LGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 231 ~~~~~~~~--~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
....+..+ ....+++++.|+.++.||.++|+++
T Consensus 162 ~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~ 196 (369)
T 2hz6_A 162 AASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVL 196 (369)
T ss_dssp CCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEE
T ss_pred cCccccCCccccceEEEECCCCEEEEEECCCCcEE
Confidence 11111111 1145667888999999999999864
No 222
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.26 E-value=2e-09 Score=94.20 Aligned_cols=239 Identities=10% Similarity=0.066 Sum_probs=164.9
Q ss_pred eeEeccCCCCCeEEEEEeCCC-CcEEEeCCCCceEEeeeC-CcCCEEEEEE-C-CCCcEEEEec----------------
Q 024676 21 DLFYSPITPDGFFLVSASKDS-SPMLRNGETGDWIGTFEG-HKGAVWSCCL-D-ANALFSASGS---------------- 80 (264)
Q Consensus 21 ~~~~~~~~~~g~~l~t~s~d~-~v~i~~~~~~~~~~~~~~-H~~~V~~v~~-~-~~~~~l~s~s---------------- 80 (264)
++.+-.-.+||++|.....++ .|.+.|+.+.+..+.+.- -......+++ + |++.++..++
T Consensus 91 ~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~ 170 (595)
T 1fwx_A 91 HMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDV 170 (595)
T ss_dssp EEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCG
T ss_pred ccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccc
Confidence 455544557898887776655 588899999998775542 1235778887 5 8898887663
Q ss_pred --CCCeEEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEEeeCCC----------------------------------
Q 024676 81 --ADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEK---------------------------------- 124 (264)
Q Consensus 81 --~D~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~---------------------------------- 124 (264)
.++.+-+.|..+.+....+........++.+|+++++++++.+.
T Consensus 171 ~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~ 250 (595)
T 1fwx_A 171 ANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDY 250 (595)
T ss_dssp GGEEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCS
T ss_pred cccCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCe
Confidence 34689999999988877776544456678999999999988653
Q ss_pred ----cEEEeeCCC--CCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCc------------eeEEecC
Q 024676 125 ----ILRIFDLNR--PDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGK------------IVQTLET 186 (264)
Q Consensus 125 ----~i~~~d~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~------------~~~~~~~ 186 (264)
.+.+.|..+ +......+. ......++.++|++.++++++..+.+|.++|+++.+ .....+.
T Consensus 251 ~~i~~V~VID~~~~~~~~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v 329 (595)
T 1fwx_A 251 QELNGVKVVDGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL 329 (595)
T ss_dssp EEETTEEEEECSGGGCCSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC
T ss_pred eEECcEEEEeCcccCCceeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC
Confidence 366777765 322112221 223456678899999999998888999999999763 3444555
Q ss_pred CCCEEEEEEcCCCcEEEEe-CCCcEEEEECCC----------ceeeeEEecCCCCc------eeeEcCCCCCEEEEe---
Q 024676 187 KSPVTSAEVSRDGRYITTA-DGSSVKFWDANH----------FGLVKGYNMPCNTE------SASLEPKLGNIFIAG--- 246 (264)
Q Consensus 187 ~~~v~~~~~s~~~~~l~~~-~~~~i~iwd~~~----------~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g--- 246 (264)
.....-++|+|+|...++. -++.|..||+.+ ...+.+...+.++. .....+ +|++|++.
T Consensus 330 G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~-DGk~l~~~Nk~ 408 (595)
T 1fwx_A 330 GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDA-TNDWLVCLSKF 408 (595)
T ss_dssp CSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTC-CSSEEEEEESC
T ss_pred CCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCC-CCCEEEEcCCC
Confidence 5567889999999434444 378999999976 56677777765542 122345 57777764
Q ss_pred cCCCeE----------EEEEcCcce
Q 024676 247 GEDMWV----------HVFDFHTGE 261 (264)
Q Consensus 247 s~d~~v----------~vwd~~~g~ 261 (264)
+.|+.+ .++|...++
T Consensus 409 skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 409 SKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp CTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred CccccccCCCCCCCcceEEEcCCCc
Confidence 336542 778885444
No 223
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.25 E-value=1.5e-09 Score=98.68 Aligned_cols=199 Identities=13% Similarity=0.067 Sum_probs=123.4
Q ss_pred CCcCCEEEEEECCCCcEEE-----EecCCCeEEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEEeeCCCc--------
Q 024676 59 GHKGAVWSCCLDANALFSA-----SGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKI-------- 125 (264)
Q Consensus 59 ~H~~~V~~v~~~~~~~~l~-----s~s~D~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~-------- 125 (264)
+|...+..++|+||+++++ +|+.+.+|++||+.+++.+...........++|+ +++.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCccccccccc
Confidence 4666788899999999887 3444468999999999865442111112467899 9999998887743
Q ss_pred -----EEEeeCCCCCCCCeEeccCC----CCeEEEEEecCCCeEEEEeeCC---CeEEEEECCCCc-eeEEe-cCCCCEE
Q 024676 126 -----LRIFDLNRPDAPPREVGNSS----GSIRTVAWLHSDQTILSSCTDS---GGVRLWDARSGK-IVQTL-ETKSPVT 191 (264)
Q Consensus 126 -----i~~~d~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~d---~~v~iwd~~~~~-~~~~~-~~~~~v~ 191 (264)
|++|++.++......+.... .....+.+++++..++++...+ ..|.++|+.++. ....+ .......
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~ 284 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADV 284 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCE
T ss_pred CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceE
Confidence 89999876543333333222 2356788999888877665532 589999998763 23333 2323333
Q ss_pred EEEEcCCCc-EEEEeC-C---CcEEEEECCCcee--eeEEecCCCCceeeEcCCCCCEEE-EecCCC--eEEEEEcCcce
Q 024676 192 SAEVSRDGR-YITTAD-G---SSVKFWDANHFGL--VKGYNMPCNTESASLEPKLGNIFI-AGGEDM--WVHVFDFHTGE 261 (264)
Q Consensus 192 ~~~~s~~~~-~l~~~~-~---~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~gs~d~--~v~vwd~~~g~ 261 (264)
.. ++++|. ++..++ + ..|..+|+.+... .+.+........ .+.+. ++.|+ +...|+ .|++||++.++
T Consensus 285 ~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~s~~-g~~lv~~~~~~g~~~l~~~d~~g~~ 361 (693)
T 3iuj_A 285 SL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL-TVHSG-SGYLFAEYMVDATARVEQFDYEGKR 361 (693)
T ss_dssp EE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE-EEEEE-TTEEEEEEEETTEEEEEEECTTSCE
T ss_pred EE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE-EEEEE-CCEEEEEEEECCeeEEEEEECCCCe
Confidence 33 555554 444443 2 4688899987643 233332222222 56664 55444 455554 68888887443
No 224
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.21 E-value=5.4e-10 Score=93.56 Aligned_cols=209 Identities=13% Similarity=-0.035 Sum_probs=130.8
Q ss_pred eeEeccCCCCCeEEEEEe----------CCCCcEEEeCCCCceEEeeeCC-------cCCEEEEEECCCCcEEEEecC--
Q 024676 21 DLFYSPITPDGFFLVSAS----------KDSSPMLRNGETGDWIGTFEGH-------KGAVWSCCLDANALFSASGSA-- 81 (264)
Q Consensus 21 ~~~~~~~~~~g~~l~t~s----------~d~~v~i~~~~~~~~~~~~~~H-------~~~V~~v~~~~~~~~l~s~s~-- 81 (264)
++.++| ||++|..+. .++.|.++|..+++.++++... ...-+.++++||+++++.+..
T Consensus 69 ~i~~sp---Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~ 145 (368)
T 1mda_H 69 LAVAGH---SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS 145 (368)
T ss_dssp EEEECT---TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS
T ss_pred ceEECC---CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCC
Confidence 688886 898888876 4788999999999999888532 123457899999998877653
Q ss_pred CCeEEE--EeCCCCcEEEEeecCCe-----E---EEEEE-------------------------------------CCCC
Q 024676 82 DFTAKL--WDALTGDEKHSFEHKHI-----V---RACAF-------------------------------------SEDT 114 (264)
Q Consensus 82 D~~v~i--wd~~~~~~~~~~~~~~~-----v---~~~~~-------------------------------------~~~~ 114 (264)
+..+.+ +|..+ +..+..... . ..+.. .+++
T Consensus 146 ~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~ 222 (368)
T 1mda_H 146 SAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYP 222 (368)
T ss_dssp SCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTT
T ss_pred CCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccC
Confidence 467888 99866 222211100 0 00111 1222
Q ss_pred CEEEEeeCCCcEEEeeCCCCCCCCeE-ec----------cCCCCeEEEEEecCCCeEEEEee---C-----CCeEEEEEC
Q 024676 115 HLLLTGGFEKILRIFDLNRPDAPPRE-VG----------NSSGSIRTVAWLHSDQTILSSCT---D-----SGGVRLWDA 175 (264)
Q Consensus 115 ~~l~s~~~d~~i~~~d~~~~~~~~~~-~~----------~~~~~i~~~~~~~~~~~~~~~~~---~-----d~~v~iwd~ 175 (264)
..++..+. +.+.+.|+.+....... .. ........+++.+++..++++.. . ++.+.++|+
T Consensus 223 ~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~ 301 (368)
T 1mda_H 223 GMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTA 301 (368)
T ss_dssp TEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEES
T ss_pred CEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEEC
Confidence 22222233 45555555322110000 00 00001111567787777776544 2 235669999
Q ss_pred CCCceeEEecCCCCEEEEEEcCCCc-EEE-Ee-CCCcEEEEECCCceeeeEEecCCCCceeeEc
Q 024676 176 RSGKIVQTLETKSPVTSAEVSRDGR-YIT-TA-DGSSVKFWDANHFGLVKGYNMPCNTESASLE 236 (264)
Q Consensus 176 ~~~~~~~~~~~~~~v~~~~~s~~~~-~l~-~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 236 (264)
.+++.+..+........+.++|||+ +++ .. .++.|.++|+.+++.++++.....+..+.+.
T Consensus 302 ~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P~~i~~~ 365 (368)
T 1mda_H 302 SVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQ 365 (368)
T ss_dssp SSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCEEECC
T ss_pred CCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCCCEEEee
Confidence 9999988776655788999999996 444 44 3789999999999999999877666555543
No 225
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.20 E-value=2.3e-08 Score=79.66 Aligned_cols=200 Identities=12% Similarity=0.030 Sum_probs=138.7
Q ss_pred eEEeeeCCc--CCEEEEEECCCCcEEEEecC--CCeEEEEeCCCCcEEEEeecCC--eEEEEEECCCCCEEEEee-CCCc
Q 024676 53 WIGTFEGHK--GAVWSCCLDANALFSASGSA--DFTAKLWDALTGDEKHSFEHKH--IVRACAFSEDTHLLLTGG-FEKI 125 (264)
Q Consensus 53 ~~~~~~~H~--~~V~~v~~~~~~~~l~s~s~--D~~v~iwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~s~~-~d~~ 125 (264)
.++++. |. .....++|++++.+.++.+. +++|++.|..+++.+..+.... ....+.+. ++.|+.+. .++.
T Consensus 11 vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~ 87 (266)
T 2iwa_A 11 VLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNI 87 (266)
T ss_dssp EEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSE
T ss_pred EEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCE
Confidence 445553 43 34688999998765555543 6899999999999888875332 22344444 44555554 5789
Q ss_pred EEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEecCC------CCEEEEEEcCCC
Q 024676 126 LRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK------SPVTSAEVSRDG 199 (264)
Q Consensus 126 i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~------~~v~~~~~s~~~ 199 (264)
+.++|..+.+........ ...-.. .+++++.++++. .+++|.++|.++.+.+..+... ...+.+.+. +|
T Consensus 88 v~viD~~t~~v~~~i~~g-~~~g~g--lt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg 162 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQ-MKDGWG--LATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG 162 (266)
T ss_dssp EEEEETTTTEEEEEEECC-SSSCCE--EEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred EEEEECCCCcEEEEEECC-CCCeEE--EEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC
Confidence 999999876544332222 122223 345677777765 4689999999999988776532 136778888 77
Q ss_pred cEEEEeC-CCcEEEEECCCceeeeEEecC--------------CCCceeeEcCCCCCEEEEecCCCeEEEEEcCcc
Q 024676 200 RYITTAD-GSSVKFWDANHFGLVKGYNMP--------------CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTG 260 (264)
Q Consensus 200 ~~l~~~~-~~~i~iwd~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g 260 (264)
++++... ++.|.+.|..+++.+..+..+ ..+.-+++.+...++|+++.....+++-++.+.
T Consensus 163 ~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 163 EVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 6666654 679999999999999998763 123467788876789999999999999887654
No 226
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.19 E-value=8.5e-09 Score=86.45 Aligned_cols=222 Identities=13% Similarity=0.068 Sum_probs=139.7
Q ss_pred CeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEEEeecCCeEE----
Q 024676 31 GFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVR---- 106 (264)
Q Consensus 31 g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~v~---- 106 (264)
+..|+.++.++.+..+|..+|+.+-.+............. +..++.++.++.+..+|..+++.+..+....++.
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~ 180 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG 180 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC
Confidence 3466778889999999999998664444322111111111 3356677889999999999999887776543332
Q ss_pred --EEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCC-CC--------eEEEEEecCCCeEEEEeeCCCeEEEEEC
Q 024676 107 --ACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSS-GS--------IRTVAWLHSDQTILSSCTDSGGVRLWDA 175 (264)
Q Consensus 107 --~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~-~~--------i~~~~~~~~~~~~~~~~~~d~~v~iwd~ 175 (264)
.... .+..++.++.++.+..+|..+++.......... +. +...-.. .++.+++ ++.++.+..+|.
T Consensus 181 ~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~v~~-~~~~g~l~~~d~ 256 (376)
T 3q7m_A 181 ESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV-VNGVVFA-LAYNGNLTALDL 256 (376)
T ss_dssp CCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE-ETTEEEE-ECTTSCEEEEET
T ss_pred CCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE-ECCEEEE-EecCcEEEEEEC
Confidence 1111 145677788899999999987765544332110 00 0000001 1344444 456689999999
Q ss_pred CCCceeEEecCCCCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeeeEEec-CCCC-ceeeEcCCCCCEEEEecCCCeEE
Q 024676 176 RSGKIVQTLETKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNM-PCNT-ESASLEPKLGNIFIAGGEDMWVH 253 (264)
Q Consensus 176 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~gs~d~~v~ 253 (264)
++++.+...... ....+... ++.++++..++.+..+|..+++.+-.+.. .... ..... .+..++.++.++.++
T Consensus 257 ~tG~~~w~~~~~-~~~~~~~~-~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~---~~~~l~v~~~~g~l~ 331 (376)
T 3q7m_A 257 RSGQIMWKRELG-SVNDFIVD-GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL---YNGNLVVGDSEGYLH 331 (376)
T ss_dssp TTCCEEEEECCC-CEEEEEEE-TTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE---ETTEEEEECTTSEEE
T ss_pred CCCcEEeeccCC-CCCCceEE-CCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE---ECCEEEEEeCCCeEE
Confidence 999988766543 34444443 55666677788999999999887655542 2111 11222 245788888899999
Q ss_pred EEEcCcceee
Q 024676 254 VFDFHTGEQI 263 (264)
Q Consensus 254 vwd~~~g~~i 263 (264)
++|.++|+.+
T Consensus 332 ~~d~~tG~~~ 341 (376)
T 3q7m_A 332 WINVEDGRFV 341 (376)
T ss_dssp EEETTTCCEE
T ss_pred EEECCCCcEE
Confidence 9999999865
No 227
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.17 E-value=9.5e-09 Score=86.14 Aligned_cols=223 Identities=9% Similarity=-0.017 Sum_probs=137.6
Q ss_pred CeEEEEEeCCCCcEEEeCCCCceEEeeeCC---------cCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEEEeec
Q 024676 31 GFFLVSASKDSSPMLRNGETGDWIGTFEGH---------KGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEH 101 (264)
Q Consensus 31 g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H---------~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~ 101 (264)
+..|..++.++.+..+|..+|+.+-.+... ...+.+.- ..++..++.++.|+.+..+|..+++.+.....
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGV-TVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEE-EEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCc-eEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 456778888999999999999865444321 12332221 12344566677899999999999998777654
Q ss_pred CCeEEE-EEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCC----eEEEEEecCCCeEEEEeeCCCeEEEEECC
Q 024676 102 KHIVRA-CAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGS----IRTVAWLHSDQTILSSCTDSGGVRLWDAR 176 (264)
Q Consensus 102 ~~~v~~-~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~----i~~~~~~~~~~~~~~~~~~d~~v~iwd~~ 176 (264)
...+.. ... .+..++.++.++.+..+|..+++............ ....... ++. +..+..++.|..+|.+
T Consensus 132 ~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~-v~~g~~~g~l~~~d~~ 206 (376)
T 3q7m_A 132 AGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGA-AVVGGDNGRVSAVLME 206 (376)
T ss_dssp SSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTE-EEECCTTTEEEEEETT
T ss_pred CCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCE-EEEEcCCCEEEEEECC
Confidence 432211 111 14577788889999999998877554433211100 0111111 334 4445667899999999
Q ss_pred CCceeEEecCCCCEE-----E---EEEcC---CCcEEEEeCCCcEEEEECCCceeeeEEecCCCCceeeEcCCCCCEEEE
Q 024676 177 SGKIVQTLETKSPVT-----S---AEVSR---DGRYITTADGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIA 245 (264)
Q Consensus 177 ~~~~~~~~~~~~~v~-----~---~~~s~---~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (264)
+++.+.......+.. . +...| ++.+++++.++.+..+|.++++.+-.+..... ..... .+..+..
T Consensus 207 tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~~-~~~~~---~~~~l~~ 282 (376)
T 3q7m_A 207 QGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGSV-NDFIV---DGNRIYL 282 (376)
T ss_dssp TCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCCE-EEEEE---ETTEEEE
T ss_pred CCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCCC-CCceE---ECCEEEE
Confidence 999887665322100 0 11111 45566666678999999999887655543221 11222 2556777
Q ss_pred ecCCCeEEEEEcCcceee
Q 024676 246 GGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 246 gs~d~~v~vwd~~~g~~i 263 (264)
++.++.++.+|.++|+++
T Consensus 283 ~~~~g~l~~~d~~tG~~~ 300 (376)
T 3q7m_A 283 VDQNDRVMALTIDGGVTL 300 (376)
T ss_dssp EETTCCEEEEETTTCCEE
T ss_pred EcCCCeEEEEECCCCcEE
Confidence 778899999999999864
No 228
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.15 E-value=2.4e-08 Score=82.84 Aligned_cols=227 Identities=12% Similarity=0.071 Sum_probs=139.7
Q ss_pred CCeeeeEeccCCCCCeEEEEEeC--CCCcEEEeCCCCceEEee-------eCCcCCEEEEEECCCCcEEEEecC-----C
Q 024676 17 RPVVDLFYSPITPDGFFLVSASK--DSSPMLRNGETGDWIGTF-------EGHKGAVWSCCLDANALFSASGSA-----D 82 (264)
Q Consensus 17 ~~v~~~~~~~~~~~g~~l~t~s~--d~~v~i~~~~~~~~~~~~-------~~H~~~V~~v~~~~~~~~l~s~s~-----D 82 (264)
.....|+++| +|+.+++... ++.+++|.+.+++.. .| .+|...+..+++++++.+.++-.. +
T Consensus 17 ~~p~~va~~~---~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~ 92 (343)
T 2qe8_A 17 LAPGNITLTP---DGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSV 92 (343)
T ss_dssp SCEEEEEECT---TSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSC
T ss_pred CCcceEEECC---CCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCC
Confidence 5677888885 8988888642 343566655455533 22 246678999999999877665433 5
Q ss_pred CeEEEEeCCCCcEEEEeecC-------CeEEEEEECCCCCEE-EEee---CCCcEEEeeCCCCCCCCeEecc--------
Q 024676 83 FTAKLWDALTGDEKHSFEHK-------HIVRACAFSEDTHLL-LTGG---FEKILRIFDLNRPDAPPREVGN-------- 143 (264)
Q Consensus 83 ~~v~iwd~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l-~s~~---~d~~i~~~d~~~~~~~~~~~~~-------- 143 (264)
..|.+||..+++.+..+... ..++.++++|++..+ ++-. .++.|.+||+.+++.. .....
T Consensus 93 ~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~-r~~~~~~~~~~~~ 171 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAA-RVLQGYPGIAPED 171 (343)
T ss_dssp CEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEE-EECTTCTTTSCCS
T ss_pred CeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEE-EEecCCCcccccc
Confidence 78999999988866665421 346788999865444 4444 5788999998754321 11100
Q ss_pred ---------------------CCCCeEEEEEecCCCeEEEEeeCCCeEEEEECC---CCc--------eeEEecCCCCEE
Q 024676 144 ---------------------SSGSIRTVAWLHSDQTILSSCTDSGGVRLWDAR---SGK--------IVQTLETKSPVT 191 (264)
Q Consensus 144 ---------------------~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~---~~~--------~~~~~~~~~~v~ 191 (264)
.......+++++++..++++....+.+..+|.. .+. .+..........
T Consensus 172 ~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pd 251 (343)
T 2qe8_A 172 IDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICD 251 (343)
T ss_dssp CCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCS
T ss_pred cceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCc
Confidence 012357788888777666665554455555432 111 011111122455
Q ss_pred EEEEcCCCcEEEEe-CCCcEEEEECCCceeeeEEecC--CCCceeeEcCCCCCEEEEecCC
Q 024676 192 SAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMP--CNTESASLEPKLGNIFIAGGED 249 (264)
Q Consensus 192 ~~~~s~~~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~gs~d 249 (264)
.++++++|.++++. .++.|..||..+++.......+ ..+..+++.++ +.++++.+..
T Consensus 252 gia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~-g~l~v~~~~~ 311 (343)
T 2qe8_A 252 GISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSD-GYLYFDCNQL 311 (343)
T ss_dssp CEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTT-SCEEEEECCG
T ss_pred eEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCC-CcEEEEeCcc
Confidence 68899999887765 4679999998555432222222 23456667664 7777777644
No 229
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.12 E-value=9.5e-07 Score=70.36 Aligned_cols=206 Identities=9% Similarity=-0.051 Sum_probs=131.8
Q ss_pred CeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCC-cEEEEecCCCeEEEEeCCCCcEE
Q 024676 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANA-LFSASGSADFTAKLWDALTGDEK 96 (264)
Q Consensus 18 ~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~-~~l~s~s~D~~v~iwd~~~~~~~ 96 (264)
.+.+++|+| .++...++-...+.|.+++...+.....+.........+++++++ ...++-...+.|.+++.......
T Consensus 37 ~~~gi~~d~--~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~ 114 (267)
T 1npe_A 37 VIIGLAFDC--VDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR 114 (267)
T ss_dssp EEEEEEEET--TTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred cEEEEEEec--CCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE
Confidence 356788886 234555566667788889887654333333222456889999865 45566667789999998654432
Q ss_pred EEeecC-CeEEEEEECCCCCEEEEeeC---CCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEE
Q 024676 97 HSFEHK-HIVRACAFSEDTHLLLTGGF---EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRL 172 (264)
Q Consensus 97 ~~~~~~-~~v~~~~~~~~~~~l~s~~~---d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~i 172 (264)
...... .....++++|++..|+.+.. .+.|..++++... ..............+++.++++.++++....+.|..
T Consensus 115 ~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~ 193 (267)
T 1npe_A 115 VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAEC 193 (267)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEE
Confidence 222222 35688999997666665544 3678888875432 111211222356778888877888888777789999
Q ss_pred EECCCCceeEEecCCCCEEEEEEcCCCcEEEEe-CCCcEEEEECCCceeeeEEecC
Q 024676 173 WDARSGKIVQTLETKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFGLVKGYNMP 227 (264)
Q Consensus 173 wd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~ 227 (264)
+|+.+...............++.. ++.++++. .++.|..+|..+++.+..+...
T Consensus 194 ~~~~g~~~~~~~~~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g 248 (267)
T 1npe_A 194 LNPAQPGRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPH 248 (267)
T ss_dssp EETTEEEEEEEEECCCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCS
T ss_pred EecCCCceEEEecCCCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEccc
Confidence 999865443333333344566665 34444444 4578999999999888887653
No 230
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.12 E-value=5.4e-08 Score=82.55 Aligned_cols=216 Identities=13% Similarity=0.120 Sum_probs=140.1
Q ss_pred CCCeEE-EEEeCCCCcEEEeCCCC----ceEEeee--------CCcCCEEEEEECCCCcEEEEecCC------CeEEEEe
Q 024676 29 PDGFFL-VSASKDSSPMLRNGETG----DWIGTFE--------GHKGAVWSCCLDANALFSASGSAD------FTAKLWD 89 (264)
Q Consensus 29 ~~g~~l-~t~s~d~~v~i~~~~~~----~~~~~~~--------~H~~~V~~v~~~~~~~~l~s~s~D------~~v~iwd 89 (264)
.++++| +++..+..|.++|..+. +..++++ +- ..-+.+...|++ .++++..+ +.+-+.|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~-s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGY-SRLHTVHCGPDA-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCE-EEEEEEEECSSC-EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCC-CcccceeECCCe-EEEEcCCCcCCCCCCeEEEEE
Confidence 466655 55667788999998765 5566663 11 123556778999 66665555 7899999
Q ss_pred CCCCcEEEEeecC-C---eEEEEEECCCCCEEEEee-------------------CCCcEEEeeCCCCCCCCeEecc-CC
Q 024676 90 ALTGDEKHSFEHK-H---IVRACAFSEDTHLLLTGG-------------------FEKILRIFDLNRPDAPPREVGN-SS 145 (264)
Q Consensus 90 ~~~~~~~~~~~~~-~---~v~~~~~~~~~~~l~s~~-------------------~d~~i~~~d~~~~~~~~~~~~~-~~ 145 (264)
..+++.+..++.. . .-..+.|+|+++.+++.. .+..|.+||+.+++........ ..
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g 250 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN 250 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE
T ss_pred CCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC
Confidence 9999998888632 1 234578899999998875 3689999999875433222221 11
Q ss_pred CCeEEEEE--ecCCCeEEEEee-----CCCeEEEEECCCCce--eEEe--cC-----------------CCCEEEEEEcC
Q 024676 146 GSIRTVAW--LHSDQTILSSCT-----DSGGVRLWDARSGKI--VQTL--ET-----------------KSPVTSAEVSR 197 (264)
Q Consensus 146 ~~i~~~~~--~~~~~~~~~~~~-----~d~~v~iwd~~~~~~--~~~~--~~-----------------~~~v~~~~~s~ 197 (264)
.....+.+ .|++...++++- .+++|.+|....++. ++.+ .. ......+.+||
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence 23345555 677777777776 667888776654431 1111 11 13467789999
Q ss_pred CCcEEEEeC--CCcEEEEECC---CceeeeEEecCC---------------CCceeeEcCCCCCEEEEec
Q 024676 198 DGRYITTAD--GSSVKFWDAN---HFGLVKGYNMPC---------------NTESASLEPKLGNIFIAGG 247 (264)
Q Consensus 198 ~~~~l~~~~--~~~i~iwd~~---~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~gs 247 (264)
||++|-.+. .+.|.+||+. +.+.+....... .+..+.++++ |++|+++.
T Consensus 331 DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpD-Gk~LyVaN 399 (462)
T 2ece_A 331 DDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRD-GRRVYVTN 399 (462)
T ss_dssp TSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTT-SSEEEEEC
T ss_pred CCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCC-CCEEEEEc
Confidence 999875543 4799999985 345565555431 3566777775 66666555
No 231
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.11 E-value=1.3e-07 Score=76.65 Aligned_cols=196 Identities=10% Similarity=0.053 Sum_probs=122.8
Q ss_pred EEEEEECCC-CcEEEEecCCCeEEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEec
Q 024676 64 VWSCCLDAN-ALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG 142 (264)
Q Consensus 64 V~~v~~~~~-~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~ 142 (264)
-.+..|+++ +.++++...++.|..||..++.. ..+.....+..++++++++++++ . ++.|.+||.++++.......
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~ 91 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATV 91 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEEC
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEec
Confidence 456778885 55667888889999999988764 44556678999999999996554 3 56789999876543211111
Q ss_pred c---CCCCeEEEEEecCCCeEEEEeeC--------CCeEEEEECCC-CceeEEecCCCCEEEEEEcCCCcEE-EEe-CCC
Q 024676 143 N---SSGSIRTVAWLHSDQTILSSCTD--------SGGVRLWDARS-GKIVQTLETKSPVTSAEVSRDGRYI-TTA-DGS 208 (264)
Q Consensus 143 ~---~~~~i~~~~~~~~~~~~~~~~~~--------d~~v~iwd~~~-~~~~~~~~~~~~v~~~~~s~~~~~l-~~~-~~~ 208 (264)
. ....++.+++.+++..++.+... ...-.||.+.. ++...........+.++++|+++.+ ++. .++
T Consensus 92 ~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~ 171 (297)
T 3g4e_A 92 DNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSY 171 (297)
T ss_dssp CTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGT
T ss_pred CCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCC
Confidence 1 11235677777766644433221 12345554432 3433323333457889999999755 333 357
Q ss_pred cEEEEEC--CCceee--eEE-ecC---CCCceeeEcCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 209 SVKFWDA--NHFGLV--KGY-NMP---CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 209 ~i~iwd~--~~~~~~--~~~-~~~---~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
.|..||+ .++... +.+ ... ..+..+.+.++ |.+.++...++.|.+||.++|+.+
T Consensus 172 ~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~-G~lwva~~~~~~v~~~d~~tG~~~ 233 (297)
T 3g4e_A 172 SVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAE-GKLWVACYNGGRVIRLDPVTGKRL 233 (297)
T ss_dssp EEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTT-SCEEEEEETTTEEEEECTTTCCEE
T ss_pred cEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCC-CCEEEEEcCCCEEEEEcCCCceEE
Confidence 8999987 344321 112 111 23345566664 788888777889999999888754
No 232
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.11 E-value=1.1e-06 Score=69.99 Aligned_cols=228 Identities=5% Similarity=-0.086 Sum_probs=137.6
Q ss_pred eEEEEEeCCCCcEEEeCCCCceE-----EeeeCCcCCEEEEEECCCC-cEEEEecCCCeEEEEeCCCCcEEEEeecC-Ce
Q 024676 32 FFLVSASKDSSPMLRNGETGDWI-----GTFEGHKGAVWSCCLDANA-LFSASGSADFTAKLWDALTGDEKHSFEHK-HI 104 (264)
Q Consensus 32 ~~l~t~s~d~~v~i~~~~~~~~~-----~~~~~H~~~V~~v~~~~~~-~~l~s~s~D~~v~iwd~~~~~~~~~~~~~-~~ 104 (264)
.+|+.+.. +.|+.++....... ..+.........+++++++ ...++-..++.|..++...+......... ..
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 34444443 35666766544321 1122122346789999865 45566677889999998766543333222 45
Q ss_pred EEEEEECCCCCEEEEe-eCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeC--CCeEEEEECCCCcee
Q 024676 105 VRACAFSEDTHLLLTG-GFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTD--SGGVRLWDARSGKIV 181 (264)
Q Consensus 105 v~~~~~~~~~~~l~s~-~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--d~~v~iwd~~~~~~~ 181 (264)
...++++|++..++.+ ...+.|.+++++.... .............+++.+.++.++++... .+.|..+++......
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~ 159 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR 159 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE
T ss_pred ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcE
Confidence 7889999976555554 4567899999864321 12221112356778888867777666543 468888887643322
Q ss_pred EEe-cCCCCEEEEEEcCCCcEE-EEe-CCCcEEEEECCCceeeeEEecCCCCceeeEcCCCCCEEEEecCCCeEEEEEcC
Q 024676 182 QTL-ETKSPVTSAEVSRDGRYI-TTA-DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFH 258 (264)
Q Consensus 182 ~~~-~~~~~v~~~~~s~~~~~l-~~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~ 258 (264)
... ......+.++++|++..| .+. ..+.|..+|...............+..++. ..+.++++...++.|..+|..
T Consensus 160 ~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~--d~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 160 ILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTS--YGKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEE--ETTEEEEEETTTTEEEEEETT
T ss_pred EEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEE--eCCEEEEEECCCCeEEEEeCC
Confidence 111 222457889999976543 443 357899999876543333332223333333 346777777778899999998
Q ss_pred cceee
Q 024676 259 TGEQI 263 (264)
Q Consensus 259 ~g~~i 263 (264)
+|+.+
T Consensus 238 ~g~~~ 242 (267)
T 1npe_A 238 ISKEM 242 (267)
T ss_dssp TTEEE
T ss_pred CCCce
Confidence 88754
No 233
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.07 E-value=6.1e-08 Score=80.41 Aligned_cols=198 Identities=11% Similarity=0.021 Sum_probs=124.8
Q ss_pred CCEEEEEECCCCcEEEEec--CCCeEEEEeCCCCcEEEEee--------cCCeEEEEEECCCCCEEEEeeC-----CCcE
Q 024676 62 GAVWSCCLDANALFSASGS--ADFTAKLWDALTGDEKHSFE--------HKHIVRACAFSEDTHLLLTGGF-----EKIL 126 (264)
Q Consensus 62 ~~V~~v~~~~~~~~l~s~s--~D~~v~iwd~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~s~~~-----d~~i 126 (264)
.....++++++++.+++.. .++.++||.+.++. +..+. +-..+..++++++++++++-.. +..|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 5788999999999888853 23436667665443 33221 2346899999999876665433 5789
Q ss_pred EEeeCCCCCCCCeEecc-----CCCCeEEEEEecCCCeEEEEee---CCCeEEEEECCCCceeEEecCC-----------
Q 024676 127 RIFDLNRPDAPPREVGN-----SSGSIRTVAWLHSDQTILSSCT---DSGGVRLWDARSGKIVQTLETK----------- 187 (264)
Q Consensus 127 ~~~d~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~---~d~~v~iwd~~~~~~~~~~~~~----------- 187 (264)
.+||+.+++........ .......+++.++++.++++.. .++.|.+||+.+++....+..+
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 99998866532221111 1223567787766667767665 5689999999988765544220
Q ss_pred -------------------CCEEEEEEcCCCcEEEEe-C-CCcEEEEECC---Cc-----ee---eeEEecCCCCceeeE
Q 024676 188 -------------------SPVTSAEVSRDGRYITTA-D-GSSVKFWDAN---HF-----GL---VKGYNMPCNTESASL 235 (264)
Q Consensus 188 -------------------~~v~~~~~s~~~~~l~~~-~-~~~i~iwd~~---~~-----~~---~~~~~~~~~~~~~~~ 235 (264)
..++.++++|+|+.|..+ . +..+..++.. .. +. +........+..+++
T Consensus 176 ~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~ 255 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISI 255 (343)
T ss_dssp ETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEE
T ss_pred ECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEE
Confidence 125889999999765443 3 3344444431 10 00 111111223445667
Q ss_pred cCCCCCEEEEecCCCeEEEEEcCcce
Q 024676 236 EPKLGNIFIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 236 ~~~~~~~~~~gs~d~~v~vwd~~~g~ 261 (264)
.++ |.++++...++.|.+||..+|+
T Consensus 256 d~~-G~l~va~~~~~~V~~~d~~~G~ 280 (343)
T 2qe8_A 256 DKD-HNIYVGDLAHSAIGVITSADRA 280 (343)
T ss_dssp CTT-CCEEEEEGGGTEEEEEETTTTE
T ss_pred CCC-CCEEEEccCCCeEEEEECCCCC
Confidence 764 8999999999999999985565
No 234
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.05 E-value=1.2e-07 Score=75.53 Aligned_cols=192 Identities=10% Similarity=0.028 Sum_probs=128.4
Q ss_pred CeeeeEeccCCCCCeEEEEEeC--CCCcEEEeCCCCceEEeeeC-CcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCc
Q 024676 18 PVVDLFYSPITPDGFFLVSASK--DSSPMLRNGETGDWIGTFEG-HKGAVWSCCLDANALFSASGSADFTAKLWDALTGD 94 (264)
Q Consensus 18 ~v~~~~~~~~~~~g~~l~t~s~--d~~v~i~~~~~~~~~~~~~~-H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~ 94 (264)
...+|+|+| ++.+.++.+. ++.+++.|..+++.++.+.- .......+++..+ ...++.-.++.+-++|..+.+
T Consensus 22 f~~Gl~~~~---dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~-~lyv~t~~~~~v~viD~~t~~ 97 (266)
T 2iwa_A 22 FTQGLVYAE---NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNE-KLYQVVWLKNIGFIYDRRTLS 97 (266)
T ss_dssp CEEEEEECS---TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETT-EEEEEETTCSEEEEEETTTTE
T ss_pred CcccEEEeC---CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCC-EEEEEEecCCEEEEEECCCCc
Confidence 357899985 6665555543 57899999999998887642 1122234566533 344556788999999999998
Q ss_pred EEEEeecC-CeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEe-ccC---CCCeEEEEEecCCCeEEEEeeCCCe
Q 024676 95 EKHSFEHK-HIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREV-GNS---SGSIRTVAWLHSDQTILSSCTDSGG 169 (264)
Q Consensus 95 ~~~~~~~~-~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~-~~~---~~~i~~~~~~~~~~~~~~~~~~d~~ 169 (264)
.+.+++.. .. ...+.++++.++.+..++.+.++|..+.+...... +.. ....+.+.+. ++.+.+....++.
T Consensus 98 v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn~~~~~~ 173 (266)
T 2iwa_A 98 NIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--NGEVWANIWQTDC 173 (266)
T ss_dssp EEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTSSE
T ss_pred EEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE--CCEEEEecCCCCe
Confidence 88888644 22 22345567777776678899999987655432222 111 1135667766 3466666666789
Q ss_pred EEEEECCCCceeEEecCC--------------CCEEEEEEcCCCcE-EEEeC-CCcEEEEECCC
Q 024676 170 VRLWDARSGKIVQTLETK--------------SPVTSAEVSRDGRY-ITTAD-GSSVKFWDANH 217 (264)
Q Consensus 170 v~iwd~~~~~~~~~~~~~--------------~~v~~~~~s~~~~~-l~~~~-~~~i~iwd~~~ 217 (264)
|.+.|.++++++..+... ...+.++++|+++. ++++. ...+...++..
T Consensus 174 V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 174 IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 999999999998877542 24689999999854 45543 45666666543
No 235
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.05 E-value=7.1e-08 Score=76.15 Aligned_cols=194 Identities=14% Similarity=0.147 Sum_probs=128.6
Q ss_pred eEEeeeCC--cCCEEEEEECCCCcEEEEecCCC--eEEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEEee-CCCcEE
Q 024676 53 WIGTFEGH--KGAVWSCCLDANALFSASGSADF--TAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGG-FEKILR 127 (264)
Q Consensus 53 ~~~~~~~H--~~~V~~v~~~~~~~~l~s~s~D~--~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~i~ 127 (264)
.++++ .| +.....+.|+ ++.+..+.+.++ .|+.+|..+++.+...............+.++.|+... .++.+.
T Consensus 33 vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~ 110 (262)
T 3nol_A 33 IVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGF 110 (262)
T ss_dssp EEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEE
T ss_pred EEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEE
Confidence 34555 34 3445888898 666667777766 99999999999888876544433322233344555554 578999
Q ss_pred EeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEecCC------CCEEEEEEcCCCcE
Q 024676 128 IFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK------SPVTSAEVSRDGRY 201 (264)
Q Consensus 128 ~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~------~~v~~~~~s~~~~~ 201 (264)
+||..+.+...+......+ +.+ +++++.++++.. .++|.++|.++.+.+..+... ..++.+.+. +|++
T Consensus 111 v~D~~t~~~~~ti~~~~eG--~gl--t~dg~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~l 184 (262)
T 3nol_A 111 VWNIRNLRQVRSFNYDGEG--WGL--THNDQYLIMSDG-TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEI 184 (262)
T ss_dssp EEETTTCCEEEEEECSSCC--CCE--EECSSCEEECCS-SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEECccCcEEEEEECCCCc--eEE--ecCCCEEEEECC-CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEE
Confidence 9999876654333322222 233 345666666644 578999999999988776431 235667776 7777
Q ss_pred EEEeC-CCcEEEEECCCceeeeEEecCC-------------CCceeeEcCCCCCEEEEecCCCeEEEEE
Q 024676 202 ITTAD-GSSVKFWDANHFGLVKGYNMPC-------------NTESASLEPKLGNIFIAGGEDMWVHVFD 256 (264)
Q Consensus 202 l~~~~-~~~i~iwd~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~gs~d~~v~vwd 256 (264)
.+... ++.|.+.|.++++.+..+.... .++-+++.+..+++|++|= .+=++|.
T Consensus 185 yan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK--~Wp~~~e 251 (262)
T 3nol_A 185 FANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK--LWPKVFE 251 (262)
T ss_dssp EEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET--TCSEEEE
T ss_pred EEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC--CCCceEE
Confidence 66664 6799999999999999888641 1245778887677777773 3334443
No 236
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.04 E-value=3.4e-08 Score=89.59 Aligned_cols=190 Identities=11% Similarity=0.057 Sum_probs=123.4
Q ss_pred CCCcEEEeCCCCceEEeeeC--Cc----------------------------CCE-EEEEECCCCcEEEEecCCCe----
Q 024676 40 DSSPMLRNGETGDWIGTFEG--HK----------------------------GAV-WSCCLDANALFSASGSADFT---- 84 (264)
Q Consensus 40 d~~v~i~~~~~~~~~~~~~~--H~----------------------------~~V-~~v~~~~~~~~l~s~s~D~~---- 84 (264)
++.+..+|..+|+.+=.+.. +. +.+ ..++++++..+++.+..++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~ 261 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP 261 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence 78899999999986544431 00 011 24678888888888877764
Q ss_pred ---------------EEEEeCCCCcEEEEeecC----------CeEEEEEECCCCC---EEEEeeCCCcEEEeeCCCCCC
Q 024676 85 ---------------AKLWDALTGDEKHSFEHK----------HIVRACAFSEDTH---LLLTGGFEKILRIFDLNRPDA 136 (264)
Q Consensus 85 ---------------v~iwd~~~~~~~~~~~~~----------~~v~~~~~~~~~~---~l~s~~~d~~i~~~d~~~~~~ 136 (264)
|..||..+|+.+..++.. .+........+++ .++.++.++.++++|.++++.
T Consensus 262 ~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 262 KWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGEL 341 (689)
T ss_dssp HHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCE
Confidence 999999999988877521 1222222223454 788899999999999988875
Q ss_pred CCeEeccC-------------------------------------CC-CeEEEEEecCCCeEEEEeeC------------
Q 024676 137 PPREVGNS-------------------------------------SG-SIRTVAWLHSDQTILSSCTD------------ 166 (264)
Q Consensus 137 ~~~~~~~~-------------------------------------~~-~i~~~~~~~~~~~~~~~~~~------------ 166 (264)
........ .+ ....+++.|..+.+++...+
T Consensus 342 l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~ 421 (689)
T 1yiq_A 342 LSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAP 421 (689)
T ss_dssp EEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCC
T ss_pred eccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccc
Confidence 42111000 00 01124566655554443211
Q ss_pred --------------------------------CCeEEEEECCCCceeEEecCCCCEEEEEEcC-CCcEEEEeCCCcEEEE
Q 024676 167 --------------------------------SGGVRLWDARSGKIVQTLETKSPVTSAEVSR-DGRYITTADGSSVKFW 213 (264)
Q Consensus 167 --------------------------------d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~i~iw 213 (264)
++.|..||++|++.+.......++..-.++. ++..+.++.|+.++.|
T Consensus 422 ~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~ 501 (689)
T 1yiq_A 422 KRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAY 501 (689)
T ss_dssp CCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEE
T ss_pred cccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEE
Confidence 3789999999999988876655544333443 4455556668999999
Q ss_pred ECCCceeeeEEecCCC
Q 024676 214 DANHFGLVKGYNMPCN 229 (264)
Q Consensus 214 d~~~~~~~~~~~~~~~ 229 (264)
|.++++.+-.++.+..
T Consensus 502 D~~tG~~lw~~~~~~~ 517 (689)
T 1yiq_A 502 AADTGEKLWEQPAASG 517 (689)
T ss_dssp ETTTCCEEEEEECSSC
T ss_pred ECCCCccceeeeCCCC
Confidence 9999999988887543
No 237
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.04 E-value=9.1e-08 Score=84.90 Aligned_cols=230 Identities=13% Similarity=0.065 Sum_probs=139.6
Q ss_pred CeEEEEEeCCCCcEEEeCCCCceEEeee--CCcC--CEEE-EEECCCCcEEEEecC-----CCeEEEEeCCCCcEEEEee
Q 024676 31 GFFLVSASKDSSPMLRNGETGDWIGTFE--GHKG--AVWS-CCLDANALFSASGSA-----DFTAKLWDALTGDEKHSFE 100 (264)
Q Consensus 31 g~~l~t~s~d~~v~i~~~~~~~~~~~~~--~H~~--~V~~-v~~~~~~~~l~s~s~-----D~~v~iwd~~~~~~~~~~~ 100 (264)
+..|+.++.|+.+..+|..+|+.+-.+. .+.. .+.+ -.+ .++..++..+. ++.|..+|..+++.+..+.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV-AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE-ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 4467788889999999999998654332 2211 1111 001 14544443332 7999999999999887765
Q ss_pred cCCeE---------------------------------------EEEEECCCCCEEEEeeCC----------------Cc
Q 024676 101 HKHIV---------------------------------------RACAFSEDTHLLLTGGFE----------------KI 125 (264)
Q Consensus 101 ~~~~v---------------------------------------~~~~~~~~~~~l~s~~~d----------------~~ 125 (264)
...+. ....+++...+++.++.+ +.
T Consensus 194 ~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~ 273 (571)
T 2ad6_A 194 ATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMT 273 (571)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTE
T ss_pred cCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEE
Confidence 32211 124566766677665532 25
Q ss_pred EEEeeCCCCCCCCeEeccC---------CCCeEEEEEecCCC--eEEEEeeCCCeEEEEECCCCceeEEecCCC------
Q 024676 126 LRIFDLNRPDAPPREVGNS---------SGSIRTVAWLHSDQ--TILSSCTDSGGVRLWDARSGKIVQTLETKS------ 188 (264)
Q Consensus 126 i~~~d~~~~~~~~~~~~~~---------~~~i~~~~~~~~~~--~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~------ 188 (264)
+..+|.++++........+ ..++. +....++. .+++.+..+|.+.++|.++|+.+.......
T Consensus 274 v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~ 352 (571)
T 2ad6_A 274 IWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFK 352 (571)
T ss_dssp EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred EEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccc
Confidence 8888988887665543221 11221 11112332 355666778999999999999887654221
Q ss_pred --------CE--------------------------EEEEEcCCCcEE-EEe----------------------------
Q 024676 189 --------PV--------------------------TSAEVSRDGRYI-TTA---------------------------- 205 (264)
Q Consensus 189 --------~v--------------------------~~~~~s~~~~~l-~~~---------------------------- 205 (264)
++ ..++++|+..++ +..
T Consensus 353 ~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 432 (571)
T 2ad6_A 353 KVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMY 432 (571)
T ss_dssp EECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred cccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceec
Confidence 11 234567765433 322
Q ss_pred ---------CCCcEEEEECCCceeeeEEecCCCCceeeEcCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 206 ---------DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 206 ---------~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
..+.+..||..+++.+-.+..........+.. .+..+..++.|+.++.||.++|+++
T Consensus 433 ~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t-~gg~v~~g~~dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 433 PGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYT-KGGLVWYATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp ECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEE-TTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEE-CCCEEEEEcCCCeEEEEECCCCCEE
Confidence 23578899999988776665543322222222 2455666899999999999999975
No 238
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.01 E-value=8.6e-08 Score=78.07 Aligned_cols=186 Identities=10% Similarity=0.045 Sum_probs=116.3
Q ss_pred eccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEee---eCC-cCCEEEEEECCCCcEEEE----ecC---
Q 024676 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTF---EGH-KGAVWSCCLDANALFSAS----GSA--- 81 (264)
Q Consensus 13 ~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~---~~H-~~~V~~v~~~~~~~~l~s----~s~--- 81 (264)
..+...+.+++++| +|+++++...++.|.+|+.. ++..... .+. ...+..+++++++.+.+| |..
T Consensus 82 ~~~~~~~~gl~~d~---dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~ 157 (305)
T 3dr2_A 82 LDATAFTNGNAVDA---QQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPS 157 (305)
T ss_dssp EESCSCEEEEEECT---TSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGG
T ss_pred eCCCCccceeeECC---CCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccc
Confidence 34556678899885 88877766666788889876 6532211 121 234667999999998886 432
Q ss_pred ----------CCeEEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEEeeCC------CcEEEeeCCCCCCCCe-Ee-cc
Q 024676 82 ----------DFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFE------KILRIFDLNRPDAPPR-EV-GN 143 (264)
Q Consensus 82 ----------D~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d------~~i~~~d~~~~~~~~~-~~-~~ 143 (264)
.+.|..+|..+++..... .....+.++|+|+++.|+.+... +.|..|++........ .. ..
T Consensus 158 ~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~ 236 (305)
T 3dr2_A 158 QGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASV 236 (305)
T ss_dssp GSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECC
T ss_pred cccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEEC
Confidence 245777777666543333 33456789999999988776654 6899999764321101 11 11
Q ss_pred CCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEecCCCCEEEEEEcCCCcEE-EEeCC
Q 024676 144 SSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYI-TTADG 207 (264)
Q Consensus 144 ~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~ 207 (264)
..+....+++.+++. +.++. . +.|.+||. .++.+..+.....+.+++|+|+++.| +++.+
T Consensus 237 ~~~~pdgi~~d~~G~-lwv~~-~-~gv~~~~~-~g~~~~~~~~~~~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 237 PDGLPDGFCVDRGGW-LWSSS-G-TGVCVFDS-DGQLLGHIPTPGTASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp SSSCCCSEEECTTSC-EEECC-S-SEEEEECT-TSCEEEEEECSSCCCEEEECTTSCEEEEEETT
T ss_pred CCCCCCeEEECCCCC-EEEec-C-CcEEEECC-CCCEEEEEECCCceeEEEEeCCCCEEEEEcCC
Confidence 122333455555544 44443 4 46999998 46666666554467889999988654 44443
No 239
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.00 E-value=2.1e-07 Score=73.51 Aligned_cols=187 Identities=11% Similarity=0.040 Sum_probs=127.2
Q ss_pred CeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEE
Q 024676 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKH 97 (264)
Q Consensus 18 ~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~ 97 (264)
...+|.|+ ++.+.++.+.++.++++|..+++.++.+-...-.-..+++..+..+++ .-.++.+.++|..+.+.+.
T Consensus 56 ftqGL~~~----~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g~~Ly~l-tw~~~~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 56 FTQGLVFH----QGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDGERLYQL-TWTEGLLFTWSGMPPQRER 130 (268)
T ss_dssp CEEEEEEE----TTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECSSCEEEE-ESSSCEEEEEETTTTEEEE
T ss_pred ccceEEEE----CCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeCCEEEEE-EccCCEEEEEECCcCcEEE
Confidence 34678887 467778888999999999999998776621111223466665554544 5678999999999999998
Q ss_pred EeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEec-cC---CCCeEEEEEecCCCeEEEEeeCCCeEEEE
Q 024676 98 SFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG-NS---SGSIRTVAWLHSDQTILSSCTDSGGVRLW 173 (264)
Q Consensus 98 ~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~-~~---~~~i~~~~~~~~~~~~~~~~~~d~~v~iw 173 (264)
+++....-..++ ++++.|+.+..++.|.++|..+.+....... .. -..++.+.|. ++.+.+.....+.|.+.
T Consensus 131 ti~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~--dG~lyanvw~s~~I~vI 206 (268)
T 3nok_A 131 TTRYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA--NGVIYANIWHSSDVLEI 206 (268)
T ss_dssp EEECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTCSEEEEE
T ss_pred EEeCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--CCEEEEEECCCCeEEEE
Confidence 887554334444 4577777776789999999877654322211 11 1234666766 34577776667899999
Q ss_pred ECCCCceeEEecCC--------------CCEEEEEEcCCC-cEEEEeCCCcEEEEE
Q 024676 174 DARSGKIVQTLETK--------------SPVTSAEVSRDG-RYITTADGSSVKFWD 214 (264)
Q Consensus 174 d~~~~~~~~~~~~~--------------~~v~~~~~s~~~-~~l~~~~~~~i~iwd 214 (264)
|.++++++..+... .-.+.|+++|++ ++++++- ..=++|.
T Consensus 207 Dp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK-~Wp~~~e 261 (268)
T 3nok_A 207 DPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK-LWPRLFE 261 (268)
T ss_dssp CTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET-TCSEEEE
T ss_pred eCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC-CCCceEE
Confidence 99999998777432 246899999976 5566653 3334443
No 240
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.00 E-value=1.6e-07 Score=74.17 Aligned_cols=187 Identities=13% Similarity=0.157 Sum_probs=124.4
Q ss_pred eeeeEeccCCCCCeEEEEEeCCC--CcEEEeCCCCceEEeeeCCcCC-EEEEEECCCCcEEEEecCCCeEEEEeCCCCcE
Q 024676 19 VVDLFYSPITPDGFFLVSASKDS--SPMLRNGETGDWIGTFEGHKGA-VWSCCLDANALFSASGSADFTAKLWDALTGDE 95 (264)
Q Consensus 19 v~~~~~~~~~~~g~~l~t~s~d~--~v~i~~~~~~~~~~~~~~H~~~-V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~ 95 (264)
..+|.|+ ++.+..+++.++ .++++|..+++.++.+...... -..+++..+..+ +..-.++.+.++|..+.+.
T Consensus 45 tqGL~~~----~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly-~ltw~~~~v~v~D~~t~~~ 119 (262)
T 3nol_A 45 TEGFFYR----NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIV-GLTWKNGLGFVWNIRNLRQ 119 (262)
T ss_dssp EEEEEEE----TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEE-EEESSSSEEEEEETTTCCE
T ss_pred cceEEEE----CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEE-EEEeeCCEEEEEECccCcE
Confidence 4678887 567777777766 8999999999988877543222 233555444333 4456788999999999999
Q ss_pred EEEeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEec-c---CCCCeEEEEEecCCCeEEEEeeCCCeEE
Q 024676 96 KHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG-N---SSGSIRTVAWLHSDQTILSSCTDSGGVR 171 (264)
Q Consensus 96 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~-~---~~~~i~~~~~~~~~~~~~~~~~~d~~v~ 171 (264)
+.+++....-..++ ++++.|+.+..++.|.++|..+.+....... . .-..++.+.|. ++.+.+....++.|.
T Consensus 120 ~~ti~~~~eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~--~G~lyan~w~~~~I~ 195 (262)
T 3nol_A 120 VRSFNYDGEGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV--DGEIFANVWQTNKIV 195 (262)
T ss_dssp EEEEECSSCCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTSSEEE
T ss_pred EEEEECCCCceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE--CCEEEEEEccCCeEE
Confidence 98887644323443 4566666665578899999876554322211 1 11234556665 446777766778999
Q ss_pred EEECCCCceeEEecCC-------------CCEEEEEEcCCCcE-EEEeCCCcEEEEEC
Q 024676 172 LWDARSGKIVQTLETK-------------SPVTSAEVSRDGRY-ITTADGSSVKFWDA 215 (264)
Q Consensus 172 iwd~~~~~~~~~~~~~-------------~~v~~~~~s~~~~~-l~~~~~~~i~iwd~ 215 (264)
+.|.++++++..+... ...+.++++|+++. ++++ ...=++|.+
T Consensus 196 vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG-K~Wp~~~ev 252 (262)
T 3nol_A 196 RIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG-KLWPKVFEI 252 (262)
T ss_dssp EECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE-TTCSEEEEE
T ss_pred EEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC-CCCCceEEE
Confidence 9999999998877542 24689999998754 4555 344445443
No 241
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.99 E-value=5.6e-07 Score=74.04 Aligned_cols=180 Identities=14% Similarity=0.081 Sum_probs=112.9
Q ss_pred CCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeee---CC-cCCEEEEEECCCCcEEEEecCC----CeEEE
Q 024676 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFE---GH-KGAVWSCCLDANALFSASGSAD----FTAKL 87 (264)
Q Consensus 16 ~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~---~H-~~~V~~v~~~~~~~~l~s~s~D----~~v~i 87 (264)
...+.+++|.| +|+++++. .+ .+.+|+..+++...... ++ ...+..+++++++.+.++...+ ....|
T Consensus 89 ~~~v~~i~~~~---dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l 163 (326)
T 2ghs_A 89 PFMGSALAKIS---DSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSI 163 (326)
T ss_dssp SSCEEEEEEEE---TTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEE
T ss_pred CCcceEEEEeC---CCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEE
Confidence 45688899886 88877654 44 48889988887543221 11 2468899999999877654322 23444
Q ss_pred EeCCCCcEEEEeecCCeEEEEEECCCCCEEEEe-eCCCcEEEeeCC--CC-CCCC-eEe---ccCCCCeEEEEEecCCCe
Q 024676 88 WDALTGDEKHSFEHKHIVRACAFSEDTHLLLTG-GFEKILRIFDLN--RP-DAPP-REV---GNSSGSIRTVAWLHSDQT 159 (264)
Q Consensus 88 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~d~~i~~~d~~--~~-~~~~-~~~---~~~~~~i~~~~~~~~~~~ 159 (264)
|.+.++............+.++|+|+++.++.+ +.++.|.+|+++ ++ .... ... ....+....+++.+++ .
T Consensus 164 ~~~~~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G-~ 242 (326)
T 2ghs_A 164 YHVAKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEG-H 242 (326)
T ss_dssp EEEETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTS-C
T ss_pred EEEeCCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCC-C
Confidence 444344433333333456789999999876554 457889999985 44 3211 111 1123345666666555 4
Q ss_pred EEEEeeCCCeEEEEECCCCceeEEecCC-CCEEEEEEc-CCCcEE
Q 024676 160 ILSSCTDSGGVRLWDARSGKIVQTLETK-SPVTSAEVS-RDGRYI 202 (264)
Q Consensus 160 ~~~~~~~d~~v~iwd~~~~~~~~~~~~~-~~v~~~~~s-~~~~~l 202 (264)
+.++...++.|..||. +++.+..+... ..+.+++|+ |++..|
T Consensus 243 lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L 286 (326)
T 2ghs_A 243 IWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRL 286 (326)
T ss_dssp EEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEE
T ss_pred EEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEE
Confidence 5555555589999998 56666666543 358899998 887543
No 242
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.98 E-value=3.4e-07 Score=71.62 Aligned_cols=186 Identities=12% Similarity=0.055 Sum_probs=123.7
Q ss_pred EEeeeCC--cCCEEEEEECCCCcEEEEecCC--CeEEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEEe-eCCCcEEE
Q 024676 54 IGTFEGH--KGAVWSCCLDANALFSASGSAD--FTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTG-GFEKILRI 128 (264)
Q Consensus 54 ~~~~~~H--~~~V~~v~~~~~~~~l~s~s~D--~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~d~~i~~ 128 (264)
++++ .| .+.+..+.|+. +.+..|.+.+ ..|+.+|+.+++.+...............+.++.|+.. -.++.+.+
T Consensus 12 ~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v 89 (243)
T 3mbr_X 12 VKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFV 89 (243)
T ss_dssp EEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEE
T ss_pred EEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEE
Confidence 4455 35 34577899987 4455565554 49999999999988887654433322222234445544 45799999
Q ss_pred eeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEecCC------CCEEEEEEcCCCcEE
Q 024676 129 FDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK------SPVTSAEVSRDGRYI 202 (264)
Q Consensus 129 ~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~------~~v~~~~~s~~~~~l 202 (264)
||..+.+...+..... .-+.++ ++++.++++-. +++|.++|.++.+.+..++.. ..++.+.+. +|+++
T Consensus 90 ~D~~tl~~~~ti~~~~--~Gwglt--~dg~~L~vSdg-s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~ly 163 (243)
T 3mbr_X 90 YDLATLTPRARFRYPG--EGWALT--SDDSHLYMSDG-TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELL 163 (243)
T ss_dssp EETTTTEEEEEEECSS--CCCEEE--ECSSCEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EECCcCcEEEEEeCCC--CceEEe--eCCCEEEEECC-CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEE
Confidence 9998765443333222 223443 45667777654 589999999999988777532 345667766 67766
Q ss_pred EEe-CCCcEEEEECCCceeeeEEecCC--------------CCceeeEcCCCCCEEEEec
Q 024676 203 TTA-DGSSVKFWDANHFGLVKGYNMPC--------------NTESASLEPKLGNIFIAGG 247 (264)
Q Consensus 203 ~~~-~~~~i~iwd~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~gs 247 (264)
+.. .+..|.+.|.++++.+..+.... -.+-+++.+..+++|+||=
T Consensus 164 anvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 164 ANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 665 46789999999999998887531 1234677887778888874
No 243
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.98 E-value=1.4e-07 Score=85.37 Aligned_cols=189 Identities=13% Similarity=0.088 Sum_probs=125.5
Q ss_pred CCCcEEEeCCCCceEEeeeCCcC--------------------------------CEEEEEECCCCcEEEEecCCC----
Q 024676 40 DSSPMLRNGETGDWIGTFEGHKG--------------------------------AVWSCCLDANALFSASGSADF---- 83 (264)
Q Consensus 40 d~~v~i~~~~~~~~~~~~~~H~~--------------------------------~V~~v~~~~~~~~l~s~s~D~---- 83 (264)
++.++.+|..+|+.+-.+..... ....+++++++..++.+..++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~ 268 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWS 268 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcccc
Confidence 68899999999987655432111 012467788887777766554
Q ss_pred ---------------eEEEEeCCCCcEEEEeecC----------CeEEEEEECCCC---CEEEEeeCCCcEEEeeCCCCC
Q 024676 84 ---------------TAKLWDALTGDEKHSFEHK----------HIVRACAFSEDT---HLLLTGGFEKILRIFDLNRPD 135 (264)
Q Consensus 84 ---------------~v~iwd~~~~~~~~~~~~~----------~~v~~~~~~~~~---~~l~s~~~d~~i~~~d~~~~~ 135 (264)
+|..+|..+++.+..++.. .....+....++ +.++.++.++.+.++|.++++
T Consensus 269 ~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~ 348 (677)
T 1kb0_A 269 HKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGK 348 (677)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred CCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCC
Confidence 5999999999988877521 111222333356 678889999999999998887
Q ss_pred CCCeEeccC---------CCC-e------------------------EEEEEecCCCeEEEEee----------------
Q 024676 136 APPREVGNS---------SGS-I------------------------RTVAWLHSDQTILSSCT---------------- 165 (264)
Q Consensus 136 ~~~~~~~~~---------~~~-i------------------------~~~~~~~~~~~~~~~~~---------------- 165 (264)
......... .+. + ..+++.|+.+.+++...
T Consensus 349 ~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~ 428 (677)
T 1kb0_A 349 FISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQ 428 (677)
T ss_dssp EEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTC
T ss_pred EeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccc
Confidence 543322110 000 0 13456666665554322
Q ss_pred --------------------------CCCeEEEEECCCCceeEEecCCCCEEEEEEcCCC-cEEEEeCCCcEEEEECCCc
Q 024676 166 --------------------------DSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDG-RYITTADGSSVKFWDANHF 218 (264)
Q Consensus 166 --------------------------~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~~~i~iwd~~~~ 218 (264)
..+.|..||+++++.+..+....++....++..+ .+++++.++.++.||.+++
T Consensus 429 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG 508 (677)
T 1kb0_A 429 AGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATG 508 (677)
T ss_dssp CCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred ccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCC
Confidence 1278999999999998887665554444455444 4455566899999999999
Q ss_pred eeeeEEecCC
Q 024676 219 GLVKGYNMPC 228 (264)
Q Consensus 219 ~~~~~~~~~~ 228 (264)
+.+..+..+.
T Consensus 509 ~~lw~~~~~~ 518 (677)
T 1kb0_A 509 EKLWEAPTGT 518 (677)
T ss_dssp CEEEEEECSS
T ss_pred ceeeeeeCCC
Confidence 9999998764
No 244
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.96 E-value=1.4e-07 Score=74.45 Aligned_cols=185 Identities=14% Similarity=0.077 Sum_probs=125.4
Q ss_pred eEEeeeCC--cCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEEEeecCCeE--EEEEECCCCCEEEEeeCCCcEEE
Q 024676 53 WIGTFEGH--KGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIV--RACAFSEDTHLLLTGGFEKILRI 128 (264)
Q Consensus 53 ~~~~~~~H--~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~s~~~d~~i~~ 128 (264)
.++++ .| +.....+.|+. +.+..+.+.++.|+.+|..+++.+... ..... ..+.... +++..+.-.++.+.+
T Consensus 45 Vv~~~-phd~~~ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V 120 (268)
T 3nok_A 45 IIREY-PHATNAFTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDG-ERLYQLTWTEGLLFT 120 (268)
T ss_dssp EEEEE-ECCTTCCEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECS-SCEEEEESSSCEEEE
T ss_pred EEEEE-cCCCccccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeC-CEEEEEEccCCEEEE
Confidence 34555 24 34567888874 556678888889999999999877766 33333 3344432 344444456899999
Q ss_pred eeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEecCC------CCEEEEEEcCCCcEE
Q 024676 129 FDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK------SPVTSAEVSRDGRYI 202 (264)
Q Consensus 129 ~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~------~~v~~~~~s~~~~~l 202 (264)
||..+.+...+.... +.-+.++ ++++.++++.. +++|.++|.++.+.+..+... ..++.+.+. +|++.
T Consensus 121 ~D~~Tl~~~~ti~~~--~eGwGLt--~Dg~~L~vSdG-s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~ly 194 (268)
T 3nok_A 121 WSGMPPQRERTTRYS--GEGWGLC--YWNGKLVRSDG-GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIY 194 (268)
T ss_dssp EETTTTEEEEEEECS--SCCCCEE--EETTEEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEE
T ss_pred EECCcCcEEEEEeCC--CceeEEe--cCCCEEEEECC-CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEE
Confidence 999876654333322 2223343 45666666654 689999999999988776531 245677777 77776
Q ss_pred EEeC-CCcEEEEECCCceeeeEEecC--------------CCCceeeEcCCCCCEEEEec
Q 024676 203 TTAD-GSSVKFWDANHFGLVKGYNMP--------------CNTESASLEPKLGNIFIAGG 247 (264)
Q Consensus 203 ~~~~-~~~i~iwd~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~gs 247 (264)
+... ++.|.+.|.++++.+..+... ...+-+++.+..+++|+||=
T Consensus 195 anvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 195 ANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 6664 679999999999999888763 12245788887788888884
No 245
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.95 E-value=3.8e-06 Score=68.75 Aligned_cols=235 Identities=10% Similarity=0.055 Sum_probs=142.9
Q ss_pred ccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeC--------------------CcCCEEEEEECC-C
Q 024676 14 GHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEG--------------------HKGAVWSCCLDA-N 72 (264)
Q Consensus 14 ~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~--------------------H~~~V~~v~~~~-~ 72 (264)
|......++++.| +|+++.++..++.|..|+..+++.. .+.. .......+++.+ +
T Consensus 16 g~~~~p~~i~~d~---~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~ 91 (322)
T 2fp8_A 16 APSYAPNSFTFDS---TNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQN 91 (322)
T ss_dssp CSSSCCCCEECCT---TCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTT
T ss_pred CccCCceEEEEcC---CCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCC
Confidence 3333345677875 7887788888899999988766543 2210 113578899997 6
Q ss_pred CcEEEEecCCCeEEEEeCCCCcEEEEee-----cCCeEEEEEECC-CCCEEEEeeC-----------------CCcEEEe
Q 024676 73 ALFSASGSADFTAKLWDALTGDEKHSFE-----HKHIVRACAFSE-DTHLLLTGGF-----------------EKILRIF 129 (264)
Q Consensus 73 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~s~~~-----------------d~~i~~~ 129 (264)
+.+.++.. .+.+..+|..++....... .....+.+++++ ++++.++-.. ++.+..+
T Consensus 92 g~l~v~d~-~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 170 (322)
T 2fp8_A 92 NQLYIVDC-YYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKY 170 (322)
T ss_dssp TEEEEEET-TTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEE
T ss_pred CcEEEEEC-CCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEE
Confidence 66555433 3447888876553221111 113467899999 8987776432 2567777
Q ss_pred eCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCc--eeEEe-cCCCCEEEEEEcCCCcEEEEeC
Q 024676 130 DLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGK--IVQTL-ETKSPVTSAEVSRDGRYITTAD 206 (264)
Q Consensus 130 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~--~~~~~-~~~~~v~~~~~s~~~~~l~~~~ 206 (264)
|..+++... .... ......+++.+++..++++....+.|..||+.+.. ....+ .... ...+++.++|++.++..
T Consensus 171 d~~~~~~~~-~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 171 DPSTKETTL-LLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSS 247 (322)
T ss_dssp ETTTTEEEE-EEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEE
T ss_pred eCCCCEEEE-eccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEec
Confidence 765443211 1111 12234578888777677666666899999987531 11111 1223 77899999998766543
Q ss_pred -----------CCcEEEEECCCceeeeEEecCC-----CCceeeEcCCCCCEEEEecCCCeEEEEEcCc
Q 024676 207 -----------GSSVKFWDANHFGLVKGYNMPC-----NTESASLEPKLGNIFIAGGEDMWVHVFDFHT 259 (264)
Q Consensus 207 -----------~~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~ 259 (264)
.+.|..+|. .++.+..+..+. .+..+.+ ..++++++...++.|..+++..
T Consensus 248 ~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~--~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 248 EELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE--HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE--ETTEEEEECSSCSEEEEEEC--
T ss_pred CcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE--eCCEEEEeecCCCceEEEeccc
Confidence 245777886 466677776542 1223333 2578888888889999998764
No 246
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.92 E-value=6.7e-07 Score=80.84 Aligned_cols=232 Identities=14% Similarity=0.127 Sum_probs=142.8
Q ss_pred CeEEEEEeCCCCcEEEeCCCCceEEeeeCCc----CCEEEEEECCCCcEEEEec-----CCCeEEEEeCCCCcEEEEeec
Q 024676 31 GFFLVSASKDSSPMLRNGETGDWIGTFEGHK----GAVWSCCLDANALFSASGS-----ADFTAKLWDALTGDEKHSFEH 101 (264)
Q Consensus 31 g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~----~~V~~v~~~~~~~~l~s~s-----~D~~v~iwd~~~~~~~~~~~~ 101 (264)
+..|+.++.|+.+..+|..+|+.+-.+.... ..+.+.-.-.++..++..+ .++.|..+|..+|+.+..+..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 196 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYT 196 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecc
Confidence 4467888899999999999998664443210 1111000001444433322 268999999999998877642
Q ss_pred C--Ce------------------------------EEEEEECCCCCEEEEeeCCC-------------------cEEEee
Q 024676 102 K--HI------------------------------VRACAFSEDTHLLLTGGFEK-------------------ILRIFD 130 (264)
Q Consensus 102 ~--~~------------------------------v~~~~~~~~~~~l~s~~~d~-------------------~i~~~d 130 (264)
. .+ ....+++|...+++.++.++ .+..+|
T Consensus 197 ~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD 276 (668)
T 1kv9_A 197 VPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIR 276 (668)
T ss_dssp SCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEEC
T ss_pred cCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEc
Confidence 1 00 11357888888888887665 388899
Q ss_pred CCCCCCCCeEecc-CC-------CCeEEEEEecCCC--eEEEEeeCCCeEEEEECCCCceeEEecCCC------------
Q 024676 131 LNRPDAPPREVGN-SS-------GSIRTVAWLHSDQ--TILSSCTDSGGVRLWDARSGKIVQTLETKS------------ 188 (264)
Q Consensus 131 ~~~~~~~~~~~~~-~~-------~~i~~~~~~~~~~--~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~------------ 188 (264)
.++++........ +. .+........++. ..++.++.+|.+.++|.++|+.+.......
T Consensus 277 ~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g 356 (668)
T 1kv9_A 277 PDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATG 356 (668)
T ss_dssp TTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTC
T ss_pred CCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccC
Confidence 9888876655432 11 2222222222332 256677888999999999999874332110
Q ss_pred -CE------------------------EEEEEcCCCcEE-EEe------------------------------------C
Q 024676 189 -PV------------------------TSAEVSRDGRYI-TTA------------------------------------D 206 (264)
Q Consensus 189 -~v------------------------~~~~~s~~~~~l-~~~------------------------------------~ 206 (264)
++ ..++++|+..++ +.. .
T Consensus 357 ~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~ 436 (668)
T 1kv9_A 357 RPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVV 436 (668)
T ss_dssp CEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGC
T ss_pred CccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCc
Confidence 01 124566664332 210 1
Q ss_pred CCcEEEEECCCceeeeEEecCCCCceeeEcCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 207 GSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 207 ~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
++.|.-||+.+++.+=.+..........+.. .+.+++.|+.|+.++.||.++|+++
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t-~gg~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLST-AGNLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cceEEEEeCCCCcEEEEccCCCCCcCceeEe-CCCEEEEECCcccchhhhhhcChhh
Confidence 2678899999998876665543332222332 3667778899999999999999875
No 247
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.91 E-value=2.5e-07 Score=78.53 Aligned_cols=177 Identities=14% Similarity=0.146 Sum_probs=120.1
Q ss_pred CCCeEEEEEeCC------CCcEEEeCCCCceEEeeeC--CcC-CEEEEEECCCCcEEEEec-------------------
Q 024676 29 PDGFFLVSASKD------SSPMLRNGETGDWIGTFEG--HKG-AVWSCCLDANALFSASGS------------------- 80 (264)
Q Consensus 29 ~~g~~l~t~s~d------~~v~i~~~~~~~~~~~~~~--H~~-~V~~v~~~~~~~~l~s~s------------------- 80 (264)
|+| .++++..+ +.+.+.|..+++.++++.. ... .-+.+.|+|+++.++|..
T Consensus 147 pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~ 225 (462)
T 2ece_A 147 PDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDR 225 (462)
T ss_dssp SSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHH
T ss_pred CCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhc
Confidence 588 66677666 7899999999999888862 221 224477899999988874
Q ss_pred CCCeEEEEeCCCCcEEEEeecC---CeEEEEEE--CCCCCEEEEee------CCCcEEEeeCCCCCCCCeEe---cc---
Q 024676 81 ADFTAKLWDALTGDEKHSFEHK---HIVRACAF--SEDTHLLLTGG------FEKILRIFDLNRPDAPPREV---GN--- 143 (264)
Q Consensus 81 ~D~~v~iwd~~~~~~~~~~~~~---~~v~~~~~--~~~~~~l~s~~------~d~~i~~~d~~~~~~~~~~~---~~--- 143 (264)
.+.+|.+||+.+++.+.++... .....+.+ +|++++++.++ .+++|.+|..+.+.....+. ..
T Consensus 226 ~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v 305 (462)
T 2ece_A 226 YGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPL 305 (462)
T ss_dssp SCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEEC
T ss_pred cCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccc
Confidence 4689999999998877777653 23445555 99999988877 45677654432221100000 00
Q ss_pred -------------CCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCC---CceeEEecCC-----------C----CEEE
Q 024676 144 -------------SSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARS---GKIVQTLETK-----------S----PVTS 192 (264)
Q Consensus 144 -------------~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~---~~~~~~~~~~-----------~----~v~~ 192 (264)
.......+.++++++.+.++.-..+.|.+||+.. .+.+..+... . ....
T Consensus 306 ~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~ 385 (462)
T 2ece_A 306 EGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQM 385 (462)
T ss_dssp CSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCC
T ss_pred cccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCE
Confidence 0123566778999999998888889999999852 3444444332 1 2577
Q ss_pred EEEcCCCcEEEEeC
Q 024676 193 AEVSRDGRYITTAD 206 (264)
Q Consensus 193 ~~~s~~~~~l~~~~ 206 (264)
++++|||++|..++
T Consensus 386 ~~lSpDGk~LyVaN 399 (462)
T 2ece_A 386 LEISRDGRRVYVTN 399 (462)
T ss_dssp EEECTTSSEEEEEC
T ss_pred EEEcCCCCEEEEEc
Confidence 89999998876554
No 248
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.90 E-value=1.6e-07 Score=82.33 Aligned_cols=185 Identities=12% Similarity=0.163 Sum_probs=130.1
Q ss_pred CCcEE-EEecCCCeEEEEeCCCCcEEE--EeecCCeEEEEEE-C-CCCCEEEEee------------------CCCcEEE
Q 024676 72 NALFS-ASGSADFTAKLWDALTGDEKH--SFEHKHIVRACAF-S-EDTHLLLTGG------------------FEKILRI 128 (264)
Q Consensus 72 ~~~~l-~s~s~D~~v~iwd~~~~~~~~--~~~~~~~v~~~~~-~-~~~~~l~s~~------------------~d~~i~~ 128 (264)
||+++ ++...+..|.+-|+.+.++.. .++.......+++ . |+++++++++ .++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 77765 566777889999999998777 4444456778887 5 8999998884 2456888
Q ss_pred eeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCC-------------------------------------CeEE
Q 024676 129 FDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS-------------------------------------GGVR 171 (264)
Q Consensus 129 ~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d-------------------------------------~~v~ 171 (264)
.|.++.+...+... .+....++.++++.+.++++... +.|.
T Consensus 180 ID~~t~~v~~qI~V--gg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 180 VDADKWEVAWQVLV--SGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EETTTTEEEEEEEE--SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EECCCCeEEEEEEe--CCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 89886554333221 12334456677777777666432 2488
Q ss_pred EEECCC--Cce-eEEecCCCCEEEEEEcCCCcEEEEeC--CCcEEEEECCCce------------eeeEEecCCCCceee
Q 024676 172 LWDARS--GKI-VQTLETKSPVTSAEVSRDGRYITTAD--GSSVKFWDANHFG------------LVKGYNMPCNTESAS 234 (264)
Q Consensus 172 iwd~~~--~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~--~~~i~iwd~~~~~------------~~~~~~~~~~~~~~~ 234 (264)
+.|.++ ++. +..+........+.++|||+++..++ +.+|.++|+.+.+ .+........+.-..
T Consensus 258 VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~a 337 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTA 337 (595)
T ss_dssp EEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEE
T ss_pred EEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEE
Confidence 888887 555 55555444567789999999876654 5799999998763 344444555666778
Q ss_pred EcCCCCCEEEEecCCCeEEEEEcCc
Q 024676 235 LEPKLGNIFIAGGEDMWVHVFDFHT 259 (264)
Q Consensus 235 ~~~~~~~~~~~gs~d~~v~vwd~~~ 259 (264)
|+++ |..+++--.|++|-+||.++
T Consensus 338 F~~d-G~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 338 FDGR-GNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp ECTT-SEEEEEETTTTEEEEEEHHH
T ss_pred ECCC-CeEEEEEecCCcEEEEEhhH
Confidence 8886 57777888999999999876
No 249
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.88 E-value=8.1e-07 Score=79.06 Aligned_cols=228 Identities=14% Similarity=0.083 Sum_probs=136.4
Q ss_pred EEEEeCCCCcEEEeCCCCceEEeee--CCcC--CEEE-EEECCCCcEEEEec-----CCCeEEEEeCCCCcEEEEeecCC
Q 024676 34 LVSASKDSSPMLRNGETGDWIGTFE--GHKG--AVWS-CCLDANALFSASGS-----ADFTAKLWDALTGDEKHSFEHKH 103 (264)
Q Consensus 34 l~t~s~d~~v~i~~~~~~~~~~~~~--~H~~--~V~~-v~~~~~~~~l~s~s-----~D~~v~iwd~~~~~~~~~~~~~~ 103 (264)
|+.++.|+.+.-.|..+|+.+=... .+.. .+.+ -.+ .++..++.++ .++.|+-+|..+|+.+..+....
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~ 202 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATG 202 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE-ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCC
Confidence 7788889999889999998653332 2110 1111 011 1444443332 48999999999999887765332
Q ss_pred eE---------------------------------------EEEEECCCCCEEEEeeCC----------------CcEEE
Q 024676 104 IV---------------------------------------RACAFSEDTHLLLTGGFE----------------KILRI 128 (264)
Q Consensus 104 ~v---------------------------------------~~~~~~~~~~~l~s~~~d----------------~~i~~ 128 (264)
+. ....+++...+++.++.+ +.+..
T Consensus 203 ~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~A 282 (599)
T 1w6s_A 203 PDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFG 282 (599)
T ss_dssp CHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEE
T ss_pred CccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEE
Confidence 21 123566777777776654 37888
Q ss_pred eeCCCCCCCCeEeccCCC--------CeEEEEEe-cCCC--eEEEEeeCCCeEEEEECCCCceeEEecCC----------
Q 024676 129 FDLNRPDAPPREVGNSSG--------SIRTVAWL-HSDQ--TILSSCTDSGGVRLWDARSGKIVQTLETK---------- 187 (264)
Q Consensus 129 ~d~~~~~~~~~~~~~~~~--------~i~~~~~~-~~~~--~~~~~~~~d~~v~iwd~~~~~~~~~~~~~---------- 187 (264)
+|.++++........+.. ....+... .++. .+++.++.+|.+.++|.++|+.+......
T Consensus 283 ld~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~ 362 (599)
T 1w6s_A 283 RDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVD 362 (599)
T ss_dssp EETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEEC
T ss_pred EeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccc
Confidence 899888776654433211 11112221 2232 45666778899999999999987655321
Q ss_pred ----CCE--------------------------EEEEEcCCCcEEEE---------------------------------
Q 024676 188 ----SPV--------------------------TSAEVSRDGRYITT--------------------------------- 204 (264)
Q Consensus 188 ----~~v--------------------------~~~~~s~~~~~l~~--------------------------------- 204 (264)
.++ ..++++|+..++..
T Consensus 363 ~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p 442 (599)
T 1w6s_A 363 LKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGP 442 (599)
T ss_dssp TTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECT
T ss_pred cCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCC
Confidence 111 13445555433211
Q ss_pred -e------CCCcEEEEECCCceeeeEEecCCCCceeeEcCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 205 -A------DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 205 -~------~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
+ ..+.+.-||+.+++.+=.+..........+.. .+.++..++.|+.++.||.++|+++
T Consensus 443 ~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~t-agg~vf~gt~dg~l~A~D~~tG~~l 507 (599)
T 1w6s_A 443 KGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMAT-AGDLVFYGTLDGYLKARDSDTGDLL 507 (599)
T ss_dssp TSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEE-TTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEe-cCCEEEEECCCCeEEEEECCCCCEE
Confidence 0 22568888998888765554332221111211 2556666899999999999999975
No 250
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.86 E-value=3.6e-06 Score=65.79 Aligned_cols=191 Identities=15% Similarity=0.124 Sum_probs=124.7
Q ss_pred ccCC--CeeeeEeccCCCCCeEEEEEeCCC--CcEEEeCCCCceEEeeeCCcCC-EEEEEECCCCcEEEEecCCCeEEEE
Q 024676 14 GHSR--PVVDLFYSPITPDGFFLVSASKDS--SPMLRNGETGDWIGTFEGHKGA-VWSCCLDANALFSASGSADFTAKLW 88 (264)
Q Consensus 14 ~h~~--~v~~~~~~~~~~~g~~l~t~s~d~--~v~i~~~~~~~~~~~~~~H~~~-V~~v~~~~~~~~l~s~s~D~~v~iw 88 (264)
.|.. ...+|.|++ +.+..+.+.+| .++.+|..+++.++.+...... -..+++..+..+ +..-.++.+.++
T Consensus 16 phd~~~ftqGL~~~~----~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly-~ltw~~~~v~v~ 90 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR----GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLI-QLTWRNHEGFVY 90 (243)
T ss_dssp ECCTTCCEEEEEEET----TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEE-EEESSSSEEEEE
T ss_pred CCCCccccccEEEEC----CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEE-EEEeeCCEEEEE
Confidence 4544 456899983 66667777654 7899999999988877543221 133455443333 446778999999
Q ss_pred eCCCCcEEEEeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEec-cC---CCCeEEEEEecCCCeEEEEe
Q 024676 89 DALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG-NS---SGSIRTVAWLHSDQTILSSC 164 (264)
Q Consensus 89 d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~-~~---~~~i~~~~~~~~~~~~~~~~ 164 (264)
|..+.+.+.+++....-..++ ++++.|+.+..++.+.++|..+.+....... .. -..++.+.|. ++.+.+..
T Consensus 91 D~~tl~~~~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~--~G~lyanv 166 (243)
T 3mbr_X 91 DLATLTPRARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV--NGELLANV 166 (243)
T ss_dssp ETTTTEEEEEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEE
T ss_pred ECCcCcEEEEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe--CCEEEEEE
Confidence 999999998887654334444 4455666555688899999876543322211 11 1245566655 45566666
Q ss_pred eCCCeEEEEECCCCceeEEecCC--------------CCEEEEEEcCCCc-EEEEeCCCcEEEEE
Q 024676 165 TDSGGVRLWDARSGKIVQTLETK--------------SPVTSAEVSRDGR-YITTADGSSVKFWD 214 (264)
Q Consensus 165 ~~d~~v~iwd~~~~~~~~~~~~~--------------~~v~~~~~s~~~~-~l~~~~~~~i~iwd 214 (264)
..+..|.+.|.++++++..+... ...+.++++|+++ +++++- ..=++|.
T Consensus 167 w~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK-~wp~~~~ 230 (243)
T 3mbr_X 167 WLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK-RWPMLYE 230 (243)
T ss_dssp TTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET-TCSEEEE
T ss_pred CCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC-CCCcEEE
Confidence 66679999999999998776421 2468999999865 455553 3444444
No 251
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.84 E-value=1.3e-06 Score=71.28 Aligned_cols=212 Identities=12% Similarity=0.035 Sum_probs=134.4
Q ss_pred EEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEEEeec-CCeEEEEEEC
Q 024676 33 FLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEH-KHIVRACAFS 111 (264)
Q Consensus 33 ~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-~~~v~~~~~~ 111 (264)
.|..++.++.+..++.. ++.+..+..+...+.++...+++... .++.++.+..+|.. +.....+.. ...+..+...
T Consensus 109 ~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~-vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d 185 (330)
T 3hxj_A 109 ILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIY-VGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIG 185 (330)
T ss_dssp EEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEE-EECTTSEEEEECTT-SCEEEEEECSSCCCSCCEEC
T ss_pred EEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEE-EEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEc
Confidence 46678888889999988 77665555555556666777777654 46678899999988 776665543 3345556677
Q ss_pred CCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEecCCC-CE
Q 024676 112 EDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKS-PV 190 (264)
Q Consensus 112 ~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~-~v 190 (264)
+++.+.+++ +.+..+| .+++...... .....+.++...++ +.+.++ +.++.|..+|. +++.+..+.... .+
T Consensus 186 ~~g~l~v~t---~~l~~~d-~~g~~~~~~~-~~~~~~~~~~~~~~-g~l~v~-t~~~gl~~~~~-~g~~~~~~~~~~~~~ 257 (330)
T 3hxj_A 186 KDGTIYFGS---DKVYAIN-PDGTEKWNFY-AGYWTVTRPAISED-GTIYVT-SLDGHLYAINP-DGTEKWRFKTGKRIE 257 (330)
T ss_dssp TTCCEEEES---SSEEEEC-TTSCEEEEEC-CSSCCCSCCEECTT-SCEEEE-ETTTEEEEECT-TSCEEEEEECSSCCC
T ss_pred CCCEEEEEe---CEEEEEC-CCCcEEEEEc-cCCcceeceEECCC-CeEEEE-cCCCeEEEECC-CCCEeEEeeCCCCcc
Confidence 778765544 7788888 5444322222 22233444554443 344443 45578888884 566655554332 23
Q ss_pred EEEEEcCCCcEEEEeCCCcEEEEECCCceeeeEEecCCCCc-eeeEcCCCCCEEEEecCCCeEEEEEcC
Q 024676 191 TSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPCNTE-SASLEPKLGNIFIAGGEDMWVHVFDFH 258 (264)
Q Consensus 191 ~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~gs~d~~v~vwd~~ 258 (264)
.++.+.+++.+.+++.++.+..+|. +++.+..+..+.... +..... .+. +..|+.+|.+++....
T Consensus 258 ~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~-~g~-l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 258 SSPVIGNTDTIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDE-NGT-IYFGTRNGKFYALFNL 323 (330)
T ss_dssp SCCEECTTSCEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECT-TCC-EEEECTTSCEEEEEC-
T ss_pred ccceEcCCCeEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcC-CCE-EEEEcCCCeEEEEecc
Confidence 4456677888888877778999996 666666666654433 333323 354 6668889999988754
No 252
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.79 E-value=4.7e-06 Score=74.05 Aligned_cols=229 Identities=17% Similarity=0.145 Sum_probs=137.9
Q ss_pred CeEEEEEeCCCCcEEEeCCCCceEEeee--CC-------cCCEEEEEEC-CCCc-EEEEec------CCCeEEEEeCCCC
Q 024676 31 GFFLVSASKDSSPMLRNGETGDWIGTFE--GH-------KGAVWSCCLD-ANAL-FSASGS------ADFTAKLWDALTG 93 (264)
Q Consensus 31 g~~l~t~s~d~~v~i~~~~~~~~~~~~~--~H-------~~~V~~v~~~-~~~~-~l~s~s------~D~~v~iwd~~~~ 93 (264)
+..|+.++.|+.+.-.|..+|+.+=.+. .+ ..++ +.=. .+++ .++.++ .++.|.-+|..+|
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~--v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG 194 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPT--IVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTG 194 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCE--EEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTC
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCE--EeCCCcCCcEEEEEeccccccCCCCEEEEEECCCC
Confidence 3467788889999999999998653332 22 1222 1111 1222 555554 3789999999999
Q ss_pred cEEEEeecCC-eE-----------------------------------------EEEEECCCCCEEEEeeC---------
Q 024676 94 DEKHSFEHKH-IV-----------------------------------------RACAFSEDTHLLLTGGF--------- 122 (264)
Q Consensus 94 ~~~~~~~~~~-~v-----------------------------------------~~~~~~~~~~~l~s~~~--------- 122 (264)
+.+....... .+ ...+++|...+++.+..
T Consensus 195 ~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~ 274 (582)
T 1flg_A 195 EEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWA 274 (582)
T ss_dssp CEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGG
T ss_pred CEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcc
Confidence 8877654321 00 12355666677776652
Q ss_pred -----------C----CcEEEeeCCCCCCCCeEecc-CC--------CCeEEEEEe-cCCC--eEEEEeeCCCeEEEEEC
Q 024676 123 -----------E----KILRIFDLNRPDAPPREVGN-SS--------GSIRTVAWL-HSDQ--TILSSCTDSGGVRLWDA 175 (264)
Q Consensus 123 -----------d----~~i~~~d~~~~~~~~~~~~~-~~--------~~i~~~~~~-~~~~--~~~~~~~~d~~v~iwd~ 175 (264)
| +.+..+|..+++........ +. .++. +... .++. .+++.++.+|.+.++|.
T Consensus 275 r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~ 353 (582)
T 1flg_A 275 RTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDR 353 (582)
T ss_dssp GSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEET
T ss_pred cccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEEC
Confidence 2 57888999888876655432 21 1221 1111 2333 35667778899999999
Q ss_pred CCCceeEEecCCC--------------CE--------------------------------EEEEEcCCC-cEEEEe---
Q 024676 176 RSGKIVQTLETKS--------------PV--------------------------------TSAEVSRDG-RYITTA--- 205 (264)
Q Consensus 176 ~~~~~~~~~~~~~--------------~v--------------------------------~~~~~s~~~-~~l~~~--- 205 (264)
++|+.+..+.... ++ ..++++|+. .+++..
T Consensus 354 ~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~ 433 (582)
T 1flg_A 354 SNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHW 433 (582)
T ss_dssp TTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECE
T ss_pred CCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhc
Confidence 9999886654321 00 123455543 333322
Q ss_pred ------------------------------CCCcEEEEECCCceeeeEEecCCCCceeeEcCCCCCEEEEecCCCeEEEE
Q 024676 206 ------------------------------DGSSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVF 255 (264)
Q Consensus 206 ------------------------------~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~v~vw 255 (264)
..+.|.-||+.+++.+=.+..........+.. .+.+++.|+.|+.++.|
T Consensus 434 ~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~t-agglvf~g~~dg~l~A~ 512 (582)
T 1flg_A 434 KEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLAT-AGNLVFTGTGDGYFKAF 512 (582)
T ss_dssp EEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEE-TTTEEEEECTTSEEEEE
T ss_pred ceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEe-CCCEEEEECCCCcEEEE
Confidence 13578889999988765554432222111211 25567779999999999
Q ss_pred EcCcceee
Q 024676 256 DFHTGEQI 263 (264)
Q Consensus 256 d~~~g~~i 263 (264)
|.++|+++
T Consensus 513 D~~tG~~l 520 (582)
T 1flg_A 513 DAKSGKEL 520 (582)
T ss_dssp ETTTCCEE
T ss_pred ECCCCCEE
Confidence 99999976
No 253
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.70 E-value=6.4e-07 Score=73.17 Aligned_cols=214 Identities=17% Similarity=0.090 Sum_probs=125.7
Q ss_pred CCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEEEeecC-CeEEEE
Q 024676 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHK-HIVRAC 108 (264)
Q Consensus 30 ~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~-~~v~~~ 108 (264)
+|. |..++.+ +..+|. +++.+..+...........+. ++ .+..++.++.+..+|.. +.....+... ..+..+
T Consensus 70 ~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~-~~-~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~ 142 (330)
T 3hxj_A 70 DGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF-ED-ILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATP 142 (330)
T ss_dssp TTE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE-TT-EEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCC
T ss_pred CCc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE-CC-EEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeee
Confidence 555 4445544 777775 555433333222222222233 34 45567778899999988 7665555433 334455
Q ss_pred EECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEecCC-
Q 024676 109 AFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK- 187 (264)
Q Consensus 109 ~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~- 187 (264)
...+++. +..++.++.+..+|.. ++...... .....+..+...+ ++.+.++. +.|..+| .+++.+......
T Consensus 143 ~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~-~~~~~~~~~~~d~-~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~ 214 (330)
T 3hxj_A 143 IVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFK-TNDAITSAASIGK-DGTIYFGS---DKVYAIN-PDGTEKWNFYAGY 214 (330)
T ss_dssp EECTTSC-EEEECTTSEEEEECTT-SCEEEEEE-CSSCCCSCCEECT-TCCEEEES---SSEEEEC-TTSCEEEEECCSS
T ss_pred EEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEe-cCCCceeeeEEcC-CCEEEEEe---CEEEEEC-CCCcEEEEEccCC
Confidence 6676776 5557778899999986 54332222 1222333333333 44455443 7899999 777776665533
Q ss_pred CCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeeeEEecCCCC-ceeeEcCCCCCEEEEecCCCeEEEEEcCccee
Q 024676 188 SPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPCNT-ESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (264)
Q Consensus 188 ~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~ 262 (264)
..+.++...++|.+.+++.++.+..+|. +++.+..+...... ......+ +..+..++.++.++.+|. +|+.
T Consensus 215 ~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~--~g~l~v~t~~ggl~~~d~-~g~~ 286 (330)
T 3hxj_A 215 WTVTRPAISEDGTIYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGN--TDTIYFGSYDGHLYAINP-DGTE 286 (330)
T ss_dssp CCCSCCEECTTSCEEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECT--TSCEEEECTTCEEEEECT-TSCE
T ss_pred cceeceEECCCCeEEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcC--CCeEEEecCCCCEEEECC-CCcE
Confidence 4577788899988888877778888874 55555555543332 2233332 335667777888999996 5664
No 254
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.65 E-value=7.8e-06 Score=74.90 Aligned_cols=237 Identities=10% Similarity=-0.022 Sum_probs=127.0
Q ss_pred CeeeeEeccCCCCCeEEEEEeC-CC----CcEEEeCCCC-ceEE-eeeCCcCCEEEEEECCCCcEEEEecCC-----CeE
Q 024676 18 PVVDLFYSPITPDGFFLVSASK-DS----SPMLRNGETG-DWIG-TFEGHKGAVWSCCLDANALFSASGSAD-----FTA 85 (264)
Q Consensus 18 ~v~~~~~~~~~~~g~~l~t~s~-d~----~v~i~~~~~~-~~~~-~~~~H~~~V~~v~~~~~~~~l~s~s~D-----~~v 85 (264)
.+....|+| |||++||-+.. +| +++++|+.++ +.+. .+.. ....++|+||++.|+..+.| ..|
T Consensus 175 ~~~~~~~S~--PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAP--PEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECT--TTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEE
T ss_pred EEeeeEecC--CCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEE
Confidence 466677772 49988774432 33 4888999988 6321 1221 12357899999877665554 357
Q ss_pred EEEeCCCCc--EEEEee--cCCeEEEEEECCCCCEEEEee---CCCcEEEeeCCCCCCCC--eEec-cCCCCeEEEEEec
Q 024676 86 KLWDALTGD--EKHSFE--HKHIVRACAFSEDTHLLLTGG---FEKILRIFDLNRPDAPP--REVG-NSSGSIRTVAWLH 155 (264)
Q Consensus 86 ~iwd~~~~~--~~~~~~--~~~~v~~~~~~~~~~~l~s~~---~d~~i~~~d~~~~~~~~--~~~~-~~~~~i~~~~~~~ 155 (264)
.++++.++. ....+. .......+.|+|++++|+..+ ....+.++|+.++.... ..+. ...+......|.
T Consensus 250 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~- 328 (751)
T 2xe4_A 250 WRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMH- 328 (751)
T ss_dssp EEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEE-
T ss_pred EEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeee-
Confidence 778887764 223332 233456788999999888655 23468888987653222 3222 223344555543
Q ss_pred CCCeEEEEeeCC----CeEEEEECCCC-ceeE-EecCCC--CEEEEEEcCCCcEEE-EeCCC--cEEEEEC-------CC
Q 024676 156 SDQTILSSCTDS----GGVRLWDARSG-KIVQ-TLETKS--PVTSAEVSRDGRYIT-TADGS--SVKFWDA-------NH 217 (264)
Q Consensus 156 ~~~~~~~~~~~d----~~v~iwd~~~~-~~~~-~~~~~~--~v~~~~~s~~~~~l~-~~~~~--~i~iwd~-------~~ 217 (264)
.++.++.....+ ..|..+|+.++ +... .+.... .+..+.+..+ .+++ ...++ .|.++|+ ..
T Consensus 329 ~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~-~lv~~~~~~g~~~l~~~dl~~~~~~~~~ 407 (751)
T 2xe4_A 329 GTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSN-YLVVAGRRAGLTRIWTMMADSQDGVFKA 407 (751)
T ss_dssp TTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSS-EEEEEEEETTEEEEEEEECCTTTSCCCT
T ss_pred eCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECC-EEEEEEEeCCEEEEEEEecccccccccC
Confidence 355555444332 36777787652 2222 233322 3445555432 3333 33455 4666775 23
Q ss_pred ceeeeEEecCCCCceeeE------cCCCCCEEEEecCC---CeEEEEEcCcce
Q 024676 218 FGLVKGYNMPCNTESASL------EPKLGNIFIAGGED---MWVHVFDFHTGE 261 (264)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~gs~d---~~v~vwd~~~g~ 261 (264)
++..+.+..+.......+ ..+.+.++++.+.. ..++.+|+.+|+
T Consensus 408 g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 460 (751)
T 2xe4_A 408 GTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS 460 (751)
T ss_dssp TTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC
T ss_pred CccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 221333433332222233 23334555554443 356677776664
No 255
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.64 E-value=3.6e-05 Score=62.48 Aligned_cols=222 Identities=11% Similarity=0.060 Sum_probs=128.8
Q ss_pred CeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecC-CC-eEEEEeCCCCcE
Q 024676 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSA-DF-TAKLWDALTGDE 95 (264)
Q Consensus 18 ~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~-D~-~v~iwd~~~~~~ 95 (264)
....++|+| +|+.+++-..++.|..++... +....+.. .+....+++++++.++++... ++ .|..+|..++..
T Consensus 33 ~pegia~~~---~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~-~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 33 FLENLASAP---DGTIFVTNHEVGEIVSITPDG-NQQIHATV-EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp CEEEEEECT---TSCEEEEETTTTEEEEECTTC-CEEEEEEC-SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CcceEEECC---CCCEEEEeCCCCeEEEECCCC-ceEEEEeC-CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence 345788885 788777766788888888765 33333322 245788999999987665433 22 465667677765
Q ss_pred EEEee--cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeE--------e-ccCCCCeEEEEEecCCCeEEEEe
Q 024676 96 KHSFE--HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPRE--------V-GNSSGSIRTVAWLHSDQTILSSC 164 (264)
Q Consensus 96 ~~~~~--~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~--------~-~~~~~~i~~~~~~~~~~~~~~~~ 164 (264)
..... .......++..+.+..+++-..++.+..+|...+...... . ...-.....+ .++++.++++.
T Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d 185 (306)
T 2p4o_A 108 ETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSN 185 (306)
T ss_dssp EEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEE
T ss_pred EEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEe
Confidence 43332 2223455555555554554445788888887542110000 0 0001123344 56667777777
Q ss_pred eCCCeEEEEECCC-Cce--eEEecCCCCEEEEEEcCCCcEEEEeC-CCcEEEEECCCceeee--EEecC-CCCceeeEc-
Q 024676 165 TDSGGVRLWDARS-GKI--VQTLETKSPVTSAEVSRDGRYITTAD-GSSVKFWDANHFGLVK--GYNMP-CNTESASLE- 236 (264)
Q Consensus 165 ~~d~~v~iwd~~~-~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~-~~~i~iwd~~~~~~~~--~~~~~-~~~~~~~~~- 236 (264)
...+.|..+|+.. ++. ...+........++++++|+++++.. .+.|..+|.. ++... .+..+ ..+..+++.
T Consensus 186 ~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g 264 (306)
T 2p4o_A 186 TEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQ 264 (306)
T ss_dssp TTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECC
T ss_pred CCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEec
Confidence 7778999999875 331 11121112345688999998776654 5789999975 44322 23333 345566676
Q ss_pred --CCCCCEEEEec
Q 024676 237 --PKLGNIFIAGG 247 (264)
Q Consensus 237 --~~~~~~~~~gs 247 (264)
++.+.++++.+
T Consensus 265 ~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 265 TEGDCTAIYVVTN 277 (306)
T ss_dssp STTTTTEEEEEEC
T ss_pred ccCCCCEEEEECC
Confidence 54455666544
No 256
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.55 E-value=6.7e-06 Score=74.33 Aligned_cols=189 Identities=11% Similarity=0.104 Sum_probs=119.4
Q ss_pred CCCcEEEeCCCCceEEeeeC---Cc---------------------------CC-EEEEEECCCCcEEEEecCCC-----
Q 024676 40 DSSPMLRNGETGDWIGTFEG---HK---------------------------GA-VWSCCLDANALFSASGSADF----- 83 (264)
Q Consensus 40 d~~v~i~~~~~~~~~~~~~~---H~---------------------------~~-V~~v~~~~~~~~l~s~s~D~----- 83 (264)
++.+..+|..+|+.+-.+.. .. +. ...++++++...++.++.++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 57899999999987644431 00 00 11357777777777776665
Q ss_pred --------------eEEEEeCCCCcEEEEeecC----------CeEEEEEECCCCC---EEEEeeCCCcEEEeeCCCCCC
Q 024676 84 --------------TAKLWDALTGDEKHSFEHK----------HIVRACAFSEDTH---LLLTGGFEKILRIFDLNRPDA 136 (264)
Q Consensus 84 --------------~v~iwd~~~~~~~~~~~~~----------~~v~~~~~~~~~~---~l~s~~~d~~i~~~d~~~~~~ 136 (264)
.|.-+|..+++.+..++.. .+.....+..+++ .++.++.++.+.++|..+++.
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 4999999999988877632 2332223333554 688889999999999988775
Q ss_pred CCeEeccC----------CCC-------------------------eEEEEEecCCCeEEEE------------------
Q 024676 137 PPREVGNS----------SGS-------------------------IRTVAWLHSDQTILSS------------------ 163 (264)
Q Consensus 137 ~~~~~~~~----------~~~-------------------------i~~~~~~~~~~~~~~~------------------ 163 (264)
........ .+. ...+++.|..+.+++.
T Consensus 337 l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~ 416 (668)
T 1kv9_A 337 ISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTR 416 (668)
T ss_dssp EEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCC
T ss_pred eccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccc
Confidence 42111000 000 0113445544443331
Q ss_pred -----------------eeCCCeEEEEECCCCceeEEecCCCCEEEEEEc-CCCcEEEEeCCCcEEEEECCCceeeeEEe
Q 024676 164 -----------------CTDSGGVRLWDARSGKIVQTLETKSPVTSAEVS-RDGRYITTADGSSVKFWDANHFGLVKGYN 225 (264)
Q Consensus 164 -----------------~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~~~i~iwd~~~~~~~~~~~ 225 (264)
...++.|..||+++++.+.......+.....+. .++..+++..++.++.||.++++.+..+.
T Consensus 417 ~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~ 496 (668)
T 1kv9_A 417 KAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFE 496 (668)
T ss_dssp SSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEec
Confidence 112378999999999998777654444332233 34455566668999999999999998887
Q ss_pred cCC
Q 024676 226 MPC 228 (264)
Q Consensus 226 ~~~ 228 (264)
.+.
T Consensus 497 ~~~ 499 (668)
T 1kv9_A 497 AQS 499 (668)
T ss_dssp CSS
T ss_pred CCC
Confidence 754
No 257
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.49 E-value=0.00023 Score=56.20 Aligned_cols=197 Identities=11% Similarity=0.131 Sum_probs=132.9
Q ss_pred eccCCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEee--eCCcCCEEEEEECCCCcEEEEecCCCeEEEEeC
Q 024676 13 HGHSRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTF--EGHKGAVWSCCLDANALFSASGSADFTAKLWDA 90 (264)
Q Consensus 13 ~~h~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~--~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~ 90 (264)
.|=.+.+.+|+|+|. ++.+.++...++.|...|.. ++.++.+ .+. .....+++.+++.++++.-.++.+.++++
T Consensus 23 ~g~~~~lSGla~~~~--~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~-~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 23 AGITNNISSLTWSAQ--SNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV-KDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp TTCCSCEEEEEEETT--TTEEEEEEETTEEEEEEETT-CCEEEEEECSSC-SSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred CCcccCcceeEEeCC--CCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC-CChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 455567999999972 34555556777778778887 8777765 333 45678899999988777667788888887
Q ss_pred CCCcE---EEEee-------cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCC--CCCCCeEec-------cCCCCeEEE
Q 024676 91 LTGDE---KHSFE-------HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNR--PDAPPREVG-------NSSGSIRTV 151 (264)
Q Consensus 91 ~~~~~---~~~~~-------~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~--~~~~~~~~~-------~~~~~i~~~ 151 (264)
..... ..... .......++|+|.++.|+++.......+|.+.. ......... ........+
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 65432 12221 223468999999998888777665556665531 000111110 122356788
Q ss_pred EEecCCCeEEEEeeCCCeEEEEECCCCceeEEecCC----------CCEEEEEEcCCCcEEEEeCCCcEEEEE
Q 024676 152 AWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETK----------SPVTSAEVSRDGRYITTADGSSVKFWD 214 (264)
Q Consensus 152 ~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~----------~~v~~~~~s~~~~~l~~~~~~~i~iwd 214 (264)
++.|..+.+++.+...+.|-++|.. ++.+..+... .....+++.++|++.++++.+.+..+.
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~ 250 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFT 250 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEE
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEE
Confidence 8888888888887888899999976 5565554322 257899999999988888877555554
No 258
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.48 E-value=0.0004 Score=59.36 Aligned_cols=236 Identities=11% Similarity=0.057 Sum_probs=132.9
Q ss_pred CeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCC---Ce-EEEEeCCCC
Q 024676 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSAD---FT-AKLWDALTG 93 (264)
Q Consensus 18 ~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D---~~-v~iwd~~~~ 93 (264)
...+|+++|.+.+|+..++ ...+.|+.++..+++... +.+.......+++++++.+.++.... .. +...+...+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~-D~~~~I~~id~~~g~v~~-~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWV-GQRDAFRHVDFVNQYVDI-KTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCCEEEECTTTTTCEEEEE-CBTSCEEEEETTTTEEEE-ECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT
T ss_pred CCceEEEccccCCCEEEEE-eCCCCEEEEECCCCEEEE-eecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCC
Confidence 3457888862113554444 333788889988776543 33344567899999999855554321 22 222222221
Q ss_pred cE-EEEeecCCeEEEEEECC-CCCEEEEeeCCCcEEEeeCCCCCCCCeEec-cCCCCeEEEEEecCCCeEEEEeeCCCeE
Q 024676 94 DE-KHSFEHKHIVRACAFSE-DTHLLLTGGFEKILRIFDLNRPDAPPREVG-NSSGSIRTVAWLHSDQTILSSCTDSGGV 170 (264)
Q Consensus 94 ~~-~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~d~~v 170 (264)
.. ...+..-.....++++| ++.+.++-..++.|+.++..++........ ........+++.+++..++++....+.|
T Consensus 218 ~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I 297 (433)
T 4hw6_A 218 FTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCI 297 (433)
T ss_dssp TCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEE
T ss_pred eeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEE
Confidence 11 11222223345678899 666655555677899998865543111111 1122234688888877677776777899
Q ss_pred EEEECC--CCce--eEEecC----------------CCCEEEEEE---------cCCCcEEEEeC-CCcEEEEECCCcee
Q 024676 171 RLWDAR--SGKI--VQTLET----------------KSPVTSAEV---------SRDGRYITTAD-GSSVKFWDANHFGL 220 (264)
Q Consensus 171 ~iwd~~--~~~~--~~~~~~----------------~~~v~~~~~---------s~~~~~l~~~~-~~~i~iwd~~~~~~ 220 (264)
..+|+. +++. ...+.. -.....+++ .++|.++++-. ...|+.++. .+.
T Consensus 298 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~- 375 (433)
T 4hw6_A 298 YRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGR- 375 (433)
T ss_dssp EEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSE-
T ss_pred EEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCC-
Confidence 998865 3321 111110 123567888 77777766644 568988885 443
Q ss_pred eeEEecC-------------------CCCceeeEcCCCCCEEEEecCCCeEEEEEc
Q 024676 221 VKGYNMP-------------------CNTESASLEPKLGNIFIAGGEDMWVHVFDF 257 (264)
Q Consensus 221 ~~~~~~~-------------------~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~ 257 (264)
+.++... ..+..+++.+..+.++++=..+..|+.+++
T Consensus 376 v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 376 VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 3333211 012344555445677777666777777765
No 259
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.46 E-value=0.00045 Score=58.05 Aligned_cols=204 Identities=7% Similarity=-0.116 Sum_probs=122.7
Q ss_pred eeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCC-CcEEEEecCCCeEEEEeCCCCcEEE
Q 024676 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDAN-ALFSASGSADFTAKLWDALTGDEKH 97 (264)
Q Consensus 19 v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~-~~~l~s~s~D~~v~iwd~~~~~~~~ 97 (264)
..+|+|++ .++....+-...+.|..++...+.....+.........+++++. +.+.++-...+.|.+.+........
T Consensus 118 ~~gl~~d~--~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~ 195 (386)
T 3v65_B 118 AIALDFHH--RRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 195 (386)
T ss_dssp EEEEEEET--TTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE
T ss_pred cEEEEEec--CCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE
Confidence 45677875 24555555556667777777655433333222233456788864 4455666677889888876554333
Q ss_pred Eee-cCCeEEEEEECCCCCEEEEeeC-C-CcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEE
Q 024676 98 SFE-HKHIVRACAFSEDTHLLLTGGF-E-KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWD 174 (264)
Q Consensus 98 ~~~-~~~~v~~~~~~~~~~~l~s~~~-d-~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd 174 (264)
... .-.....++++|.+..|+.+.. . +.|..++++... ........-.....+++.+.++.+..+-...+.|..+|
T Consensus 196 l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d 274 (386)
T 3v65_B 196 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 274 (386)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEEC
T ss_pred eecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC-cEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEe
Confidence 332 2245688999997776665543 3 678888876432 22222222334678899887888888877778999999
Q ss_pred CCCCceeEEec-CCCCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeeeEEe
Q 024676 175 ARSGKIVQTLE-TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYN 225 (264)
Q Consensus 175 ~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~ 225 (264)
+........+. .......+++..+..|++-...+.|..+|..+++.++.+.
T Consensus 275 ~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 275 LDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp TTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 87543322222 2234667777444334444445788888866655444443
No 260
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.44 E-value=0.00077 Score=62.04 Aligned_cols=232 Identities=9% Similarity=0.124 Sum_probs=139.8
Q ss_pred eeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEee-eCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEE
Q 024676 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTF-EGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKH 97 (264)
Q Consensus 19 v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~-~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~ 97 (264)
|.++...+ +|++.+ |+.++-+..++..++++.... ..+...|.++...+++.+.+....+| +..||..++....
T Consensus 175 i~~i~~d~---~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~~G-l~~~~~~~~~~~~ 249 (795)
T 4a2l_A 175 IASTLYRQ---GDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATEGAG-LFLINPKTKEIKN 249 (795)
T ss_dssp CEEEEEEE---TTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEEBSSC-EEEEETTTTEEEE
T ss_pred eEEEEECC---CCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEECCCC-eEEEeCCCCeEEE
Confidence 66666653 565544 565555778888777654322 12456788888888887666544445 7788977664332
Q ss_pred Eee--------cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEe------ccCCCCeEEEEEecCCCeEEEE
Q 024676 98 SFE--------HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREV------GNSSGSIRTVAWLHSDQTILSS 163 (264)
Q Consensus 98 ~~~--------~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~~ 163 (264)
... ....|.++..++++.+.+. +.+ -+.+||..+........ .-....|.++..-++ +.+- .
T Consensus 250 ~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-t~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~-g~lW-i 325 (795)
T 4a2l_A 250 YLHSPSNPKSISSNYIRSLAMDSQNRLWIG-TFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQ-GGMW-L 325 (795)
T ss_dssp ECCCTTCTTSCSCSBEEEEEECTTSCEEEE-ESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTT-SCEE-E
T ss_pred eecCCCCccccCCCeEEEEEEcCCCCEEEE-eCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCC-cCEE-E
Confidence 211 1346899999998887664 444 57888875442211100 012245777765443 3333 3
Q ss_pred eeCCCeEEEEECCCCceeEEec-------CCCCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeeeEEecC---------
Q 024676 164 CTDSGGVRLWDARSGKIVQTLE-------TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMP--------- 227 (264)
Q Consensus 164 ~~~d~~v~iwd~~~~~~~~~~~-------~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~--------- 227 (264)
++.++.|..|+..+++...... ....|.++...++|.+.++..++.|..||..+... +.+...
T Consensus 326 gt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~~l~ 404 (795)
T 4a2l_A 326 GTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRF-TSYTLQEDESARGIG 404 (795)
T ss_dssp EESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCE-EEECCC------CCS
T ss_pred EECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcE-EEEecCCCCcccCCC
Confidence 4566789999987665322111 13459999999999988888777899999876543 223211
Q ss_pred CC-CceeeEcCCCCCEEEEecCCCeEEEEEcCcce
Q 024676 228 CN-TESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 228 ~~-~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~ 261 (264)
.. ..++...+ .+..+..|..++-+..||..+++
T Consensus 405 ~~~v~~i~~d~-~g~~lWigt~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 405 SNNIKAVYVDE-KKSLVYIGTHAGGLSILHRNSGQ 438 (795)
T ss_dssp CSCEEEEEEET-TTTEEEEEETTTEEEEEETTTCC
T ss_pred CccEEEEEEcC-CCCEEEEEeCcCceeEEeCCCCc
Confidence 11 12333333 35646667776779999987664
No 261
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.39 E-value=0.0005 Score=55.66 Aligned_cols=203 Identities=11% Similarity=-0.009 Sum_probs=119.6
Q ss_pred eEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEEeeCCC--cEEEee
Q 024676 53 WIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFEK--ILRIFD 130 (264)
Q Consensus 53 ~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~--~i~~~d 130 (264)
.+..|... .....++|++++.++++-..++.|..||.... ....+........++++++++++++..... .+..++
T Consensus 24 ~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d 101 (306)
T 2p4o_A 24 IITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLV 101 (306)
T ss_dssp EEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEE
T ss_pred EeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEc
Confidence 34455332 34578999999987777778899999997654 344444556788999999999766554332 355566
Q ss_pred CCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCce-eEEe-------c---CCCCEEEEEEcCCC
Q 024676 131 LNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI-VQTL-------E---TKSPVTSAEVSRDG 199 (264)
Q Consensus 131 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~-~~~~-------~---~~~~v~~~~~s~~~ 199 (264)
..+++...............++.. .+..++++...++.|..+|..+++. +... . .-...+.+ +|++
T Consensus 102 ~~~g~~~~~~~~~~~~~~~g~~~~-~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg 178 (306)
T 2p4o_A 102 KSDGTVETLLTLPDAIFLNGITPL-SDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFG 178 (306)
T ss_dssp CTTSCEEEEEECTTCSCEEEEEES-SSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEET
T ss_pred CCCCeEEEEEeCCCccccCccccc-CCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCC
Confidence 655543211111111223334433 3445555555568899999876531 1110 0 11234555 7887
Q ss_pred cEE-EEe-CCCcEEEEECCC-cee--eeEEecCCCCceeeEcCCCCCEEEEecCCCeEEEEEcCccee
Q 024676 200 RYI-TTA-DGSSVKFWDANH-FGL--VKGYNMPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (264)
Q Consensus 200 ~~l-~~~-~~~~i~iwd~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~ 262 (264)
.++ ++. ..+.|..+|+.. +.. ...+.....+..+++.++ |.++++-...+.|.++|.. |+.
T Consensus 179 ~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~d-G~l~va~~~~~~V~~~~~~-G~~ 244 (306)
T 2p4o_A 179 NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVE-GNLYGATHIYNSVVRIAPD-RST 244 (306)
T ss_dssp TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTT-CCEEEECBTTCCEEEECTT-CCE
T ss_pred CEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCC-CCEEEEeCCCCeEEEECCC-CCE
Confidence 654 343 357899999864 221 222221233455666664 7888887778889999864 543
No 262
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.39 E-value=4.8e-05 Score=67.41 Aligned_cols=145 Identities=17% Similarity=0.128 Sum_probs=92.6
Q ss_pred eEEEEeCCCCcEEEEeecC-----------CeEEEEEECCCCC---EEEEeeCCCcEEEeeCCCCCCCCeEeccC-----
Q 024676 84 TAKLWDALTGDEKHSFEHK-----------HIVRACAFSEDTH---LLLTGGFEKILRIFDLNRPDAPPREVGNS----- 144 (264)
Q Consensus 84 ~v~iwd~~~~~~~~~~~~~-----------~~v~~~~~~~~~~---~l~s~~~d~~i~~~d~~~~~~~~~~~~~~----- 144 (264)
.|..+|..+++.+..++.. .++. +...++++ .++.++.++.+.++|..+++.........
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 6899999999988877522 2222 22224563 56778889999999988876543322111
Q ss_pred ------C-CCe--------------------------EEEEEecCCCeEEEEee--------------------------
Q 024676 145 ------S-GSI--------------------------RTVAWLHSDQTILSSCT-------------------------- 165 (264)
Q Consensus 145 ------~-~~i--------------------------~~~~~~~~~~~~~~~~~-------------------------- 165 (264)
. .++ ..+++.|..+.+++...
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 431 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM 431 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccccee
Confidence 0 000 12345555555444321
Q ss_pred ----------CCCeEEEEECCCCceeEEecCCCCEEEEE-EcCCCcEEEEeCCCcEEEEECCCceeeeEEecCCC
Q 024676 166 ----------DSGGVRLWDARSGKIVQTLETKSPVTSAE-VSRDGRYITTADGSSVKFWDANHFGLVKGYNMPCN 229 (264)
Q Consensus 166 ----------~d~~v~iwd~~~~~~~~~~~~~~~v~~~~-~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~ 229 (264)
.++.|..||+++++.+..+....++.... ...++..++++.++.++.+|.++++.+-.+.....
T Consensus 432 ~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~ 506 (571)
T 2ad6_A 432 YPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSG 506 (571)
T ss_dssp EECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred ccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCC
Confidence 34789999999999888776543332222 22356666666789999999999999988887543
No 263
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.35 E-value=0.0016 Score=59.82 Aligned_cols=233 Identities=12% Similarity=0.125 Sum_probs=139.1
Q ss_pred CCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeC-------CcCCEEEEEECCCCcEEEEecCCCeEEEE
Q 024676 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEG-------HKGAVWSCCLDANALFSASGSADFTAKLW 88 (264)
Q Consensus 16 ~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~-------H~~~V~~v~~~~~~~~l~s~s~D~~v~iw 88 (264)
...|.+|...+ +|.+.+ |+.++-+..++..+++....... ....|+++...+++.+.+.. .+| +.+|
T Consensus 214 ~~~i~~i~~d~---~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~~G-l~~~ 287 (795)
T 4a2l_A 214 TKQIQAILQQS---PTRIWV-ATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGT-FND-LNIY 287 (795)
T ss_dssp CCCEEEEEEEE---TTEEEE-EEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEE-SSC-EEEE
T ss_pred CCeeEEEEEcC---CCCEEE-EECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEe-CCh-hheE
Confidence 34566666653 566554 44444477888877765432211 24679999999888765543 344 7888
Q ss_pred eCCCCcEEEEee--------cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEe-----ccCCCCeEEEEEec
Q 024676 89 DALTGDEKHSFE--------HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREV-----GNSSGSIRTVAWLH 155 (264)
Q Consensus 89 d~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~-----~~~~~~i~~~~~~~ 155 (264)
|..++....... ....|.++..++++.+.+ |+.++-+..++........... .-....|.++...+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~ 366 (795)
T 4a2l_A 288 HEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWL-GTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDK 366 (795)
T ss_dssp ETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEE-EESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECT
T ss_pred cCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEE-EECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECC
Confidence 977665333221 124699999999987654 6677778888764332111000 01233577776544
Q ss_pred CCCeEEEEeeCCCeEEEEECCCCceeEEec---------CCCCEEEEEEcCCCc-EEEEeCCCcEEEEECCCceeeeEEe
Q 024676 156 SDQTILSSCTDSGGVRLWDARSGKIVQTLE---------TKSPVTSAEVSRDGR-YITTADGSSVKFWDANHFGLVKGYN 225 (264)
Q Consensus 156 ~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~---------~~~~v~~~~~s~~~~-~l~~~~~~~i~iwd~~~~~~~~~~~ 225 (264)
+ +.+- .++.++.|..||..+++...-.. ....|.++...++++ +.++..++.+..||..+++. ..+.
T Consensus 367 ~-g~lW-iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~-~~~~ 443 (795)
T 4a2l_A 367 D-KNLW-IGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQV-ENFN 443 (795)
T ss_dssp T-SCEE-EEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCE-EEEC
T ss_pred C-CCEE-EEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcE-EEee
Confidence 3 3333 34566789999998876543221 134688999999998 77777777899999877653 3343
Q ss_pred c-----CC-CCceeeEcCCCCCEEEEecCCCeEEEEEcCcce
Q 024676 226 M-----PC-NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 226 ~-----~~-~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~ 261 (264)
. +. ...++...+ .+.+.+ |+.+| +.+||..+++
T Consensus 444 ~~~~~l~~~~v~~i~~d~-~g~lwi-gt~~G-l~~~~~~~~~ 482 (795)
T 4a2l_A 444 QRNSQLVNENVYAILPDG-EGNLWL-GTLSA-LVRFNPEQRS 482 (795)
T ss_dssp TTTSCCSCSCEEEEEECS-SSCEEE-EESSC-EEEEETTTTE
T ss_pred cCCCCcCCCeeEEEEECC-CCCEEE-EecCc-eeEEeCCCCe
Confidence 2 11 122333333 355444 44444 8888877654
No 264
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.35 E-value=0.00021 Score=58.23 Aligned_cols=193 Identities=12% Similarity=0.062 Sum_probs=111.7
Q ss_pred EEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEEEeec---------------------CCeEEEEEECC-CCCEEEEee
Q 024676 64 VWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEH---------------------KHIVRACAFSE-DTHLLLTGG 121 (264)
Q Consensus 64 V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~---------------------~~~v~~~~~~~-~~~~l~s~~ 121 (264)
-.++++++++.++.++..++.|..||..++... .+.. ...+..+++++ +++ |+.+.
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d 98 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVD 98 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEE
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEE
Confidence 356778888886677778889999988765432 2211 12467889998 555 45554
Q ss_pred CCCcEEEeeCCCCCCCCeE--ec-cCCCCeEEEEEec-CCCeEEEEeeC-----------------CCeEEEEECCCCce
Q 024676 122 FEKILRIFDLNRPDAPPRE--VG-NSSGSIRTVAWLH-SDQTILSSCTD-----------------SGGVRLWDARSGKI 180 (264)
Q Consensus 122 ~d~~i~~~d~~~~~~~~~~--~~-~~~~~i~~~~~~~-~~~~~~~~~~~-----------------d~~v~iwd~~~~~~ 180 (264)
..+.+..+|..+++..... .. ........++..+ ++ .+.++... ++.|..||..+++.
T Consensus 99 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 99 CYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTG-IVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp TTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTC-CEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred CCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCC-EEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 4555788886544321110 00 0112356677666 55 44444322 36788899887765
Q ss_pred eEEecCCCCEEEEEEcCCCcEE-EEe-CCCcEEEEECCCce--eeeEE-ecCCCCceeeEcCCCCCEEEEecC-------
Q 024676 181 VQTLETKSPVTSAEVSRDGRYI-TTA-DGSSVKFWDANHFG--LVKGY-NMPCNTESASLEPKLGNIFIAGGE------- 248 (264)
Q Consensus 181 ~~~~~~~~~v~~~~~s~~~~~l-~~~-~~~~i~iwd~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~gs~------- 248 (264)
..........+.++++|+++++ ++. ..+.|..|++.... ....+ ..+. +..+.+.++ |.++++...
T Consensus 178 ~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~-G~l~va~~~~~~~~~~ 255 (322)
T 2fp8_A 178 TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNAD-GHFWVSSSEELDGNMH 255 (322)
T ss_dssp EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTT-SCEEEEEEEETTSSTT
T ss_pred EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCC-CCEEEEecCccccccc
Confidence 3322222345678999999754 443 34789999986421 11222 2222 455666664 676666544
Q ss_pred ---CCeEEEEEcCccee
Q 024676 249 ---DMWVHVFDFHTGEQ 262 (264)
Q Consensus 249 ---d~~v~vwd~~~g~~ 262 (264)
.+.|..+|.+ |+.
T Consensus 256 ~~~~~~v~~~d~~-G~~ 271 (322)
T 2fp8_A 256 GRVDPKGIKFDEF-GNI 271 (322)
T ss_dssp SCEEEEEEEECTT-SCE
T ss_pred CCCccEEEEECCC-CCE
Confidence 4667777753 543
No 265
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.33 E-value=0.001 Score=56.71 Aligned_cols=235 Identities=10% Similarity=0.026 Sum_probs=128.6
Q ss_pred eeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEE-EEecCCC----eEEEEeCCCC
Q 024676 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFS-ASGSADF----TAKLWDALTG 93 (264)
Q Consensus 19 v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l-~s~s~D~----~v~iwd~~~~ 93 (264)
...|+++|. ++..|..+...+.|+.++..++... .+.........++|++++.++ ++...++ .+...+....
T Consensus 139 P~~lavdp~--~~g~Lyv~d~~~~I~~id~~~~~v~-~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~ 215 (430)
T 3tc9_A 139 AVWLSFDPK--NHNHLYLVGEQHPTRLIDFEKEYVS-TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESG 215 (430)
T ss_dssp CCEEEEETT--EEEEEEEEEBTEEEEEEETTTTEEE-EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGT
T ss_pred CCEEEECCC--CCCeEEEEeCCCcEEEEECCCCEEE-EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCc
Confidence 356777741 2334555544477888888776543 333344557889999999855 4443222 2333332221
Q ss_pred cE-EEEeecCCeEEEEEECC-CCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEE
Q 024676 94 DE-KHSFEHKHIVRACAFSE-DTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVR 171 (264)
Q Consensus 94 ~~-~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~ 171 (264)
.. ...+........++++| ++.++++-...+.|..++...+................+++.+++..++++....+.|.
T Consensus 216 ~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~ 295 (430)
T 3tc9_A 216 FKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYIL 295 (430)
T ss_dssp SCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEE
T ss_pred eeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEE
Confidence 11 12222223345678999 66666655567889999986543211111111234567888888876777766778999
Q ss_pred EEECCC--Cce--eEEecC----------------CCCEE-EEEEc--------CCCcEEEEeC-CCcEEEEECCCceee
Q 024676 172 LWDARS--GKI--VQTLET----------------KSPVT-SAEVS--------RDGRYITTAD-GSSVKFWDANHFGLV 221 (264)
Q Consensus 172 iwd~~~--~~~--~~~~~~----------------~~~v~-~~~~s--------~~~~~l~~~~-~~~i~iwd~~~~~~~ 221 (264)
.+|... ++. ...+.. ..... .+++. ++|.++++-. ...|+.++. .+...
T Consensus 296 ~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G~v~ 374 (430)
T 3tc9_A 296 RSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QGRVT 374 (430)
T ss_dssp EEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TSEEE
T ss_pred EEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CCcEE
Confidence 988653 221 111110 01123 45553 4466655543 467888884 44332
Q ss_pred eEEecC------------------CCCceeeEcCCCCCEEEEecCCCeEEEEEc
Q 024676 222 KGYNMP------------------CNTESASLEPKLGNIFIAGGEDMWVHVFDF 257 (264)
Q Consensus 222 ~~~~~~------------------~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~ 257 (264)
...... ..+..+++.+..+.++++-..+..|+.++.
T Consensus 375 ~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 375 TFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp EEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 222110 023345555544677777777777777764
No 266
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.33 E-value=1.7e-05 Score=71.50 Aligned_cols=228 Identities=12% Similarity=0.097 Sum_probs=123.1
Q ss_pred CCeEEEEEeCCC-----------CcEEEeCCCCceEE--eee-CCcCCEEEEEECCCCcEEEEec-CCCeEEEEeCCCCc
Q 024676 30 DGFFLVSASKDS-----------SPMLRNGETGDWIG--TFE-GHKGAVWSCCLDANALFSASGS-ADFTAKLWDALTGD 94 (264)
Q Consensus 30 ~g~~l~t~s~d~-----------~v~i~~~~~~~~~~--~~~-~H~~~V~~v~~~~~~~~l~s~s-~D~~v~iwd~~~~~ 94 (264)
+|+.++.|+.+. .+.+||..++++.. .+. .+.....++++..+++.++.|+ .+..+.+||..+..
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~ 276 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS 276 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCc
Confidence 788888887654 47789999987643 232 2333334567778888888887 45689999987663
Q ss_pred EEEEee--cCCeEEEEEECCCCCEEEEee-CC-----CcEEEeeCCCCCCCCeEecc------CCCCeEEEEEecCCCeE
Q 024676 95 EKHSFE--HKHIVRACAFSEDTHLLLTGG-FE-----KILRIFDLNRPDAPPREVGN------SSGSIRTVAWLHSDQTI 160 (264)
Q Consensus 95 ~~~~~~--~~~~v~~~~~~~~~~~l~s~~-~d-----~~i~~~d~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~~ 160 (264)
-..... ....-..++..+++++++.|+ .+ ..+.+||..+.+. ..... ....-. ..+..++..+
T Consensus 277 W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W--~~~~~~~~~p~~~~~~~-~~~~~~~~iy 353 (656)
T 1k3i_A 277 WIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW--TSLPNAKVNPMLTADKQ-GLYRSDNHAW 353 (656)
T ss_dssp EEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE--EEETTSCSGGGCCCCTT-GGGTTTCSCC
T ss_pred eeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc--eeCCCcccccccccccc-ceeecCCceE
Confidence 211111 111113445667899999888 34 5688899865432 22100 000000 0001122222
Q ss_pred EEEee--------CCCeEEEEECCCCceeEEecCC----------CCEEEEEEc-CCCcEEEEeC-CC-----------c
Q 024676 161 LSSCT--------DSGGVRLWDARSGKIVQTLETK----------SPVTSAEVS-RDGRYITTAD-GS-----------S 209 (264)
Q Consensus 161 ~~~~~--------~d~~v~iwd~~~~~~~~~~~~~----------~~v~~~~~s-~~~~~l~~~~-~~-----------~ 209 (264)
+..+. ....+..||.++.......... ..-..+.+. .++++++.+. +. .
T Consensus 354 v~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~ 433 (656)
T 1k3i_A 354 LFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHI 433 (656)
T ss_dssp EEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEE
T ss_pred EEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceE
Confidence 32221 1246788999877643322111 012233333 3666665542 11 5
Q ss_pred EEEEECCCceeeeEE--ecCCCC--ceeeEcCCCCCEEEEecCC-----------CeEEEEEcCcce
Q 024676 210 VKFWDANHFGLVKGY--NMPCNT--ESASLEPKLGNIFIAGGED-----------MWVHVFDFHTGE 261 (264)
Q Consensus 210 i~iwd~~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~gs~d-----------~~v~vwd~~~g~ 261 (264)
+.+||..+..-...- .++... ......+ ++++++.||.+ ..+.+||..+++
T Consensus 434 v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~-~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 434 ITLGEPGTSPNTVFASNGLYFARTFHTSVVLP-DGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp EECCSTTSCCEEEECTTCCSSCCBSCEEEECT-TSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred EEcCCCCCCCeeEEccCCCCCCcccCCeEECC-CCCEEEECCcccCcCcCCCCcccceEEEcCCCCc
Confidence 778887665432221 222221 1223344 58999999865 568999987654
No 267
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.28 E-value=4.6e-05 Score=69.82 Aligned_cols=196 Identities=9% Similarity=0.003 Sum_probs=109.2
Q ss_pred CCcC-CEEEEEEC-CCCcEEEEe-cC----CCeEEEEeCCCC-cEEEEeecCCeEEEEEECCCCCEEEEeeCC-----Cc
Q 024676 59 GHKG-AVWSCCLD-ANALFSASG-SA----DFTAKLWDALTG-DEKHSFEHKHIVRACAFSEDTHLLLTGGFE-----KI 125 (264)
Q Consensus 59 ~H~~-~V~~v~~~-~~~~~l~s~-s~----D~~v~iwd~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----~~ 125 (264)
+|.- .+...+|+ ||+++++-+ +. ..+|+++|+.++ +.+... .......+.|+|+++.|+....| ..
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~-~~~~~~~~~WspDg~~l~y~~~d~~~~~~~ 248 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK-VSGTNGEIVWGPDHTSLFYVTKDETLRENK 248 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC-EEEECSCCEECSSTTEEEEEEECTTCCEEE
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc-ccCceeeEEEecCCCEEEEEEECCCCCCCE
Confidence 3443 57788999 999987632 22 236999999988 632110 01112357899999888877665 25
Q ss_pred EEEeeCCCCCCCCeEec--cCCCCeEEEEEecCCCeEEEEeeC--CCeEEEEECCCCc-ee--EEecC--CCCEEEEEEc
Q 024676 126 LRIFDLNRPDAPPREVG--NSSGSIRTVAWLHSDQTILSSCTD--SGGVRLWDARSGK-IV--QTLET--KSPVTSAEVS 196 (264)
Q Consensus 126 i~~~d~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~--d~~v~iwd~~~~~-~~--~~~~~--~~~v~~~~~s 196 (264)
|..+++.++........ ........+.|++++..++.+... ...|.++|+.++. .. ..+.. .....++.++
T Consensus 249 v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~ 328 (751)
T 2xe4_A 249 VWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMH 328 (751)
T ss_dssp EEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEE
T ss_pred EEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeee
Confidence 77788866532222221 122345567899988887766543 3468888998762 12 33322 2344555555
Q ss_pred CCCcEEEEeC-C--C--cEEEEECCCceeeeE--EecCCCCceeeEcCCCCCEEEEecCCCeEEEE
Q 024676 197 RDGRYITTAD-G--S--SVKFWDANHFGLVKG--YNMPCNTESASLEPKLGNIFIAGGEDMWVHVF 255 (264)
Q Consensus 197 ~~~~~l~~~~-~--~--~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~gs~d~~v~vw 255 (264)
.++.++..++ + + .|..+|+.+....+. +..........+....+.++++...|+..++|
T Consensus 329 ~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~ 394 (751)
T 2xe4_A 329 GTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIW 394 (751)
T ss_dssp TTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEE
T ss_pred eCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEE
Confidence 5555544443 2 2 466667654211111 22221111122222245677788888876655
No 268
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.27 E-value=0.00054 Score=60.80 Aligned_cols=146 Identities=14% Similarity=0.135 Sum_probs=91.7
Q ss_pred CeEEEEeCCCCcEEEEeecC-----------CeEEEEEEC-CCCC---EEEEeeCCCcEEEeeCCCCCCCCeEeccCC--
Q 024676 83 FTAKLWDALTGDEKHSFEHK-----------HIVRACAFS-EDTH---LLLTGGFEKILRIFDLNRPDAPPREVGNSS-- 145 (264)
Q Consensus 83 ~~v~iwd~~~~~~~~~~~~~-----------~~v~~~~~~-~~~~---~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~-- 145 (264)
+.|.-+|..+++.+..++.. .++. +... .+++ .++.++.++.+.++|.++++..........
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 68999999999988887532 1222 1221 4563 678889999999999887765433221100
Q ss_pred ---------CC---------------------------------eEEEEEecCCCeEEEEe-------------------
Q 024676 146 ---------GS---------------------------------IRTVAWLHSDQTILSSC------------------- 164 (264)
Q Consensus 146 ---------~~---------------------------------i~~~~~~~~~~~~~~~~------------------- 164 (264)
+. ...+++.|..+.+++..
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 00 00123333333333321
Q ss_pred -------------eCCCeEEEEECCCCceeEEecCCCCEEE-EEEcCCCcEEEEeCCCcEEEEECCCceeeeEEecCCC
Q 024676 165 -------------TDSGGVRLWDARSGKIVQTLETKSPVTS-AEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPCN 229 (264)
Q Consensus 165 -------------~~d~~v~iwd~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~ 229 (264)
..++.|.-||+++++.+.......+... .....++..++++.|+.++.||.++++.+-.++.+..
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g 528 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSG 528 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCC
Confidence 1258899999999998877654433322 1123456666666789999999999999988887644
No 269
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.25 E-value=0.0014 Score=54.97 Aligned_cols=219 Identities=7% Similarity=-0.108 Sum_probs=134.4
Q ss_pred CCCcEEEeCCCCceEEeeeCCcCCEEEEEECCC-CcEEEEecCCCeEEEEeCCCCcEEEEeec-CCeEEEEEECCCCCEE
Q 024676 40 DSSPMLRNGETGDWIGTFEGHKGAVWSCCLDAN-ALFSASGSADFTAKLWDALTGDEKHSFEH-KHIVRACAFSEDTHLL 117 (264)
Q Consensus 40 d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~-~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l 117 (264)
...|+..+...++....+.+. .....++|++. +.+..+-...+.|..++...+.....+.. ......+++++.+..|
T Consensus 95 ~~~I~~i~~~~~~~~~~~~~~-~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~l 173 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTLLLNNL-ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKL 173 (386)
T ss_dssp BSCEEEECTTSCCCEEEECSC-SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEE
T ss_pred CccceeeccCCCcEEEEecCC-CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeE
Confidence 356777787766544434433 34678999964 45556666778999999877654433322 2234678888755555
Q ss_pred E-EeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCC-CeEEEEECCCCceeEEec-CCCCEEEEE
Q 024676 118 L-TGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS-GGVRLWDARSGKIVQTLE-TKSPVTSAE 194 (264)
Q Consensus 118 ~-s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d-~~v~iwd~~~~~~~~~~~-~~~~v~~~~ 194 (264)
+ +-...+.|.+.+++... ..............++..|.++.++.+-... +.|...++.......... .-...+.++
T Consensus 174 Y~~d~~~~~I~~~~~dg~~-~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla 252 (386)
T 3v65_B 174 YWTDSGTSRIEVANLDGAH-RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLT 252 (386)
T ss_dssp EEEETTTTEEEECBTTSCS-CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEE
T ss_pred EEEcCCCCeEEEEeCCCCc-eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEE
Confidence 4 44556788888876432 2222222224567788888788877776655 788888887544332222 234578999
Q ss_pred EcCCCc-EEEEe-CCCcEEEEECCCceeeeEEec-CCCCceeeEcCCCCCEEEEecCCCeEEEEEcCccee
Q 024676 195 VSRDGR-YITTA-DGSSVKFWDANHFGLVKGYNM-PCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (264)
Q Consensus 195 ~s~~~~-~l~~~-~~~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~ 262 (264)
++|++. ++.+- ..+.|..+|+........+.. ...+..+++. .+.++++-...+.|..+|..+|+.
T Consensus 253 vd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~--~~~ly~td~~~~~V~~~~~~~G~~ 321 (386)
T 3v65_B 253 IDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF--EDSLYWTDWHTKSINSANKFTGKN 321 (386)
T ss_dssp EEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCS
T ss_pred EeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE--CCEEEEeeCCCCeEEEEECCCCcc
Confidence 998654 43443 356888888764332222221 1233444452 467888888889999998656653
No 270
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.21 E-value=0.0015 Score=53.24 Aligned_cols=204 Identities=13% Similarity=-0.078 Sum_probs=120.8
Q ss_pred CCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCC---CceEE-eeeCCcCCEEEEEECCC-CcEEEEecCCCeEEEEeCC
Q 024676 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGET---GDWIG-TFEGHKGAVWSCCLDAN-ALFSASGSADFTAKLWDAL 91 (264)
Q Consensus 17 ~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~---~~~~~-~~~~H~~~V~~v~~~~~-~~~l~s~s~D~~v~iwd~~ 91 (264)
....+++|++ .++...++-...+.|..++... +.... .+.........+++++. +.+.++-...+.|.+.+..
T Consensus 30 ~~p~g~~~d~--~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~ 107 (316)
T 1ijq_A 30 RNVVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 107 (316)
T ss_dssp SSEEEEEEET--TTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CceEEEEEEe--CCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCC
Confidence 3456788886 2345555656667788888765 12222 23222234567888864 4455666778899999987
Q ss_pred CCcEEEEee-cCCeEEEEEECCCCCEEEEeeCC--CcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCC
Q 024676 92 TGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFE--KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSG 168 (264)
Q Consensus 92 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d--~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~ 168 (264)
......... .......++++|.+..|+.+... +.|...+++... ........-.....+++.++++.+..+-...+
T Consensus 108 g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~ 186 (316)
T 1ijq_A 108 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 186 (316)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEEECCCCCceEEEEeccCCEEEEEECCCC
Confidence 654433333 23456889999977666655543 578878775322 11111122335678888888888888777778
Q ss_pred eEEEEECCCCceeEEec---CCCCEEEEEEcCCCcEEEE-eCCCcEEEEECCCceeeeEE
Q 024676 169 GVRLWDARSGKIVQTLE---TKSPVTSAEVSRDGRYITT-ADGSSVKFWDANHFGLVKGY 224 (264)
Q Consensus 169 ~v~iwd~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~-~~~~~i~iwd~~~~~~~~~~ 224 (264)
.|..+|+.......... .......+++.. +.++.+ ...+.|..+|..+++.+..+
T Consensus 187 ~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~-~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 187 SISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp EEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred eEEEEecCCCceEEEeecCCccCCcEEEEEEC-CEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 99999997533221111 123356777754 444444 34578888887665544333
No 271
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.19 E-value=0.0014 Score=53.91 Aligned_cols=201 Identities=14% Similarity=0.274 Sum_probs=123.5
Q ss_pred eeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCC----Cc---EE-EEecC--CCeEEEEeC
Q 024676 21 DLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDAN----AL---FS-ASGSA--DFTAKLWDA 90 (264)
Q Consensus 21 ~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~----~~---~l-~s~s~--D~~v~iwd~ 90 (264)
++--+|..|...++++....+-+.+||+ +|+.++.+.. +.++.|.+-|+ ++ ++ +|.-. +.+|.+|++
T Consensus 30 avw~~~~dp~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~i 106 (355)
T 3amr_A 30 AIWLDPKTPQNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAI 106 (355)
T ss_dssp EEECCSSCGGGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEE
T ss_pred cEecCCCCCCccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEE
Confidence 3444566667777888888889999999 7888888764 45666665542 22 33 44444 589999976
Q ss_pred --CCCcEEEEee-------cC-CeEEEEEE--CCC-CC-EEEEeeCCCcEEEeeCC---CCCCC---CeEeccCCCCeEE
Q 024676 91 --LTGDEKHSFE-------HK-HIVRACAF--SED-TH-LLLTGGFEKILRIFDLN---RPDAP---PREVGNSSGSIRT 150 (264)
Q Consensus 91 --~~~~~~~~~~-------~~-~~v~~~~~--~~~-~~-~l~s~~~d~~i~~~d~~---~~~~~---~~~~~~~~~~i~~ 150 (264)
.++. +..+. .. ..+..+|+ +|. ++ +++....++.+..|++. .+... .+.+ ...+.+..
T Consensus 107 Dp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f-~lgsq~Eg 184 (355)
T 3amr_A 107 DGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF-KMNSQTEG 184 (355)
T ss_dssp CTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE-ECSSCEEE
T ss_pred CCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe-cCCCCcce
Confidence 3443 44331 11 44566777 774 44 57777788999998873 22111 1122 23345666
Q ss_pred EEEecCCCeEEEEeeCCCeEEEEECC-----CCceeEEecCC---CCEEEEEE--cCCCc-E-EEEeC-CCcEEEEECC-
Q 024676 151 VAWLHSDQTILSSCTDSGGVRLWDAR-----SGKIVQTLETK---SPVTSAEV--SRDGR-Y-ITTAD-GSSVKFWDAN- 216 (264)
Q Consensus 151 ~~~~~~~~~~~~~~~~d~~v~iwd~~-----~~~~~~~~~~~---~~v~~~~~--s~~~~-~-l~~~~-~~~i~iwd~~- 216 (264)
++.-+..+.++++ -++..|-.+|.+ +++.+..+... ..+..+++ .++++ + ++++. +.+..+||.+
T Consensus 185 cvvDd~~g~Lyv~-eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~ 263 (355)
T 3amr_A 185 MAADDEYGRLYIA-EEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQG 263 (355)
T ss_dssp EEEETTTTEEEEE-ETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred EEEcCCCCeEEEe-cccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCC
Confidence 6666556665554 555556666654 34555554322 35777777 56655 4 45554 4689999997
Q ss_pred CceeeeEEecC
Q 024676 217 HFGLVKGYNMP 227 (264)
Q Consensus 217 ~~~~~~~~~~~ 227 (264)
+++.+..|.+.
T Consensus 264 ~~~~vg~f~Ig 274 (355)
T 3amr_A 264 KNKYVADFRIT 274 (355)
T ss_dssp TCCEEEEEEEC
T ss_pred CCcEEEEEEec
Confidence 67788888653
No 272
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.19 E-value=0.0018 Score=53.55 Aligned_cols=203 Identities=7% Similarity=-0.117 Sum_probs=119.7
Q ss_pred eeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCC-CcEEEEecCCCeEEEEeCCCCcEEE
Q 024676 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDAN-ALFSASGSADFTAKLWDALTGDEKH 97 (264)
Q Consensus 19 v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~-~~~l~s~s~D~~v~iwd~~~~~~~~ 97 (264)
..+|+|++ .++....+-...+.|..++...+.....+.........+++++. +.+..+-...+.|.+.+........
T Consensus 75 ~~~l~~d~--~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 152 (349)
T 3v64_C 75 AIALDFHH--RRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 152 (349)
T ss_dssp EEEEEEET--TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred eEEEEEec--cccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEE
Confidence 45677775 24455555555666777777655433223222233467888864 4555666777889999987654333
Q ss_pred Eee-cCCeEEEEEECCCCCEEEEeeC-C-CcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEE
Q 024676 98 SFE-HKHIVRACAFSEDTHLLLTGGF-E-KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWD 174 (264)
Q Consensus 98 ~~~-~~~~v~~~~~~~~~~~l~s~~~-d-~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd 174 (264)
... .-...+.++++|.+..|+.+.. . +.|..++++.... .......-.....+++.+.++.+..+-...+.|..+|
T Consensus 153 l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~ 231 (349)
T 3v64_C 153 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR-RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 231 (349)
T ss_dssp EECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc-EEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEe
Confidence 332 2245688999996666665443 3 6788888764321 1111112234678899888888888877778999999
Q ss_pred CCCCceeEEec-CCCCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeeeEE
Q 024676 175 ARSGKIVQTLE-TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGY 224 (264)
Q Consensus 175 ~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~ 224 (264)
+........+. .......+++..+..|++-...+.|..+|..+++.+..+
T Consensus 232 ~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 232 LDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp TTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCCCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCCCccEEe
Confidence 87543322222 223466777743333333334567888885555443333
No 273
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.17 E-value=0.0018 Score=52.82 Aligned_cols=203 Identities=7% Similarity=-0.079 Sum_probs=121.7
Q ss_pred eeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEE-eeeCCcCCEEEEEECC-CCcEEEEecCCCeEEEEeCCCCcEE
Q 024676 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIG-TFEGHKGAVWSCCLDA-NALFSASGSADFTAKLWDALTGDEK 96 (264)
Q Consensus 19 v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~-~~~~H~~~V~~v~~~~-~~~~l~s~s~D~~v~iwd~~~~~~~ 96 (264)
..+|+|++ .+++...+-...+.|..++...+.... .+.........+++.+ .+.+..+-...+.|.+.+.......
T Consensus 37 ~~~ld~d~--~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 114 (318)
T 3sov_A 37 AAAVDFVF--SHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 114 (318)
T ss_dssp EEEEEEEG--GGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred cEEEEEEe--CCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE
Confidence 44778876 234555555556677777776543211 1211123345688886 4555566667789999998765433
Q ss_pred EEe-ecCCeEEEEEECCCCCEEEEeeC--CCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEE
Q 024676 97 HSF-EHKHIVRACAFSEDTHLLLTGGF--EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLW 173 (264)
Q Consensus 97 ~~~-~~~~~v~~~~~~~~~~~l~s~~~--d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iw 173 (264)
... ........++++|.+..|+.+.. .+.|...+++... ........-.....+++.+.++.+..+-...+.|..+
T Consensus 115 ~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~ 193 (318)
T 3sov_A 115 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKS 193 (318)
T ss_dssp EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS-CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-eEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEE
Confidence 332 22344688999997666665553 4678878875332 1122212223457889988888888887777899999
Q ss_pred ECCCCceeEEec-CCCCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeeeEE
Q 024676 174 DARSGKIVQTLE-TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGY 224 (264)
Q Consensus 174 d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~ 224 (264)
|+.......... .......+++..++.|.+-...+.|..+|..+++..+.+
T Consensus 194 d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 194 NLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp ETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred cCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEE
Confidence 987543322222 223466777765544444344578888898766544444
No 274
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.14 E-value=0.0026 Score=53.66 Aligned_cols=225 Identities=7% Similarity=-0.098 Sum_probs=135.0
Q ss_pred EEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCC-cEEEEecCCCeEEEEeCCCC----cEEEEee-cCCeEE
Q 024676 33 FLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANA-LFSASGSADFTAKLWDALTG----DEKHSFE-HKHIVR 106 (264)
Q Consensus 33 ~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~-~~l~s~s~D~~v~iwd~~~~----~~~~~~~-~~~~v~ 106 (264)
+|+.+. ...|+..++........+. ....+.+++|++.+ ....+-...+.|+.+++... ....... ......
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 444433 3567777877665443333 34567789999754 44566666788988887652 2222222 234567
Q ss_pred EEEECCCCCEEE-EeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeC-CCeEEEEECCCCceeEEe
Q 024676 107 ACAFSEDTHLLL-TGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTD-SGGVRLWDARSGKIVQTL 184 (264)
Q Consensus 107 ~~~~~~~~~~l~-s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-d~~v~iwd~~~~~~~~~~ 184 (264)
.+++++.+..|+ +-...+.|.+.+++.... .............++..|.++.++.+-.. .+.|...++.........
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~-~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~ 241 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 241 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSE-EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEE
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCce-EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEE
Confidence 889998544444 445568899988864332 22222223346778888777777776533 367888888754433333
Q ss_pred c-CCCCEEEEEEcCCCcEE-EEe-CCCcEEEEECCCceeeeEEecC---CCCceeeEcCCCCCEEEEecCCCeEEEEEcC
Q 024676 185 E-TKSPVTSAEVSRDGRYI-TTA-DGSSVKFWDANHFGLVKGYNMP---CNTESASLEPKLGNIFIAGGEDMWVHVFDFH 258 (264)
Q Consensus 185 ~-~~~~v~~~~~s~~~~~l-~~~-~~~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~ 258 (264)
. .-...+.++++|++..| .+- ....|..+|+............ ..+..++.. .+.++++-...+.|..+|..
T Consensus 242 ~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~--~~~lywtd~~~~~V~~~~~~ 319 (400)
T 3p5b_L 242 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRL 319 (400)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE--TTEEEEEESSSCSEEEEESS
T ss_pred ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe--CCEEEEecCCCCeEEEEEcC
Confidence 2 23568899999876544 342 3468999998654322222221 223344442 46788888888899999977
Q ss_pred ccee
Q 024676 259 TGEQ 262 (264)
Q Consensus 259 ~g~~ 262 (264)
+|+.
T Consensus 320 ~G~~ 323 (400)
T 3p5b_L 320 TGSD 323 (400)
T ss_dssp SCCC
T ss_pred CCCc
Confidence 7754
No 275
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.14 E-value=0.00073 Score=55.57 Aligned_cols=187 Identities=9% Similarity=0.146 Sum_probs=108.3
Q ss_pred cEEEEecCCCeEEEEeCCCCcEEEEeecCCeEEEEEECCC----CC---EEEEeeC---CCcEEEeeCCCCCCCCeEecc
Q 024676 74 LFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSED----TH---LLLTGGF---EKILRIFDLNRPDAPPREVGN 143 (264)
Q Consensus 74 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~s~~~---d~~i~~~d~~~~~~~~~~~~~ 143 (264)
.++++....+-+.++|+ +|+.+..+.. ..++.+..-|. ++ ++++... ++.+.+|+++-..........
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~ 118 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTD 118 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSC
T ss_pred cEEEEEcCCCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccc
Confidence 34555556678999999 7887777754 44555554442 22 2333333 578999977421112222211
Q ss_pred ------CC-CCeEEEEE--ecCCC-eEEEEeeCCCeEEEEECC-------CCceeEEecCCCCEEEEEEcCCC-cEEEEe
Q 024676 144 ------SS-GSIRTVAW--LHSDQ-TILSSCTDSGGVRLWDAR-------SGKIVQTLETKSPVTSAEVSRDG-RYITTA 205 (264)
Q Consensus 144 ------~~-~~i~~~~~--~~~~~-~~~~~~~~d~~v~iwd~~-------~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~ 205 (264)
.. .....+++ .+..+ .++.....++.+..|++. +.+.++++.....+..+.+.+.. +++++-
T Consensus 119 ~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~e 198 (355)
T 3amr_A 119 PDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAE 198 (355)
T ss_dssp TTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEE
T ss_pred cccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEec
Confidence 11 34444555 45333 345555666999999882 34567778777788888888764 555666
Q ss_pred CCCcEEEEECC-----CceeeeEEecC---CCCceeeE--cCCC-CCEEEEecCCCeEEEEEcC-ccee
Q 024676 206 DGSSVKFWDAN-----HFGLVKGYNMP---CNTESASL--EPKL-GNIFIAGGEDMWVHVFDFH-TGEQ 262 (264)
Q Consensus 206 ~~~~i~iwd~~-----~~~~~~~~~~~---~~~~~~~~--~~~~-~~~~~~gs~d~~v~vwd~~-~g~~ 262 (264)
++..|..++.+ +...+..+... ..+.-+.+ .++. +.+|++.-.+....+||.. +.+.
T Consensus 199 Ed~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~ 267 (355)
T 3amr_A 199 EDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKY 267 (355)
T ss_dssp TTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCE
T ss_pred ccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcE
Confidence 67667777754 34455544322 12233333 3322 2355556578899999986 4443
No 276
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.11 E-value=0.00055 Score=60.89 Aligned_cols=188 Identities=11% Similarity=0.036 Sum_probs=115.0
Q ss_pred cEEEEecC-CCeEEEEeC-CCCcEEEEeecCCe------------EEEEEECCCCCE----EEEeeCCCcEEEeeCCCCC
Q 024676 74 LFSASGSA-DFTAKLWDA-LTGDEKHSFEHKHI------------VRACAFSEDTHL----LLTGGFEKILRIFDLNRPD 135 (264)
Q Consensus 74 ~~l~s~s~-D~~v~iwd~-~~~~~~~~~~~~~~------------v~~~~~~~~~~~----l~s~~~d~~i~~~d~~~~~ 135 (264)
..++.++. ++.|.-+|. .+|+.+..+..... ...+.+.|.+.. ++.++.|+.+..+|..+++
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~ 142 (599)
T 1w6s_A 63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGE 142 (599)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCC
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCC
Confidence 34455555 788999999 89998887754321 123455443434 7788889999999998887
Q ss_pred CCCeEeccC-C-C-CeEE-EEEecCCCeEEEEee-----CCCeEEEEECCCCceeEEecCCCCE----------------
Q 024676 136 APPREVGNS-S-G-SIRT-VAWLHSDQTILSSCT-----DSGGVRLWDARSGKIVQTLETKSPV---------------- 190 (264)
Q Consensus 136 ~~~~~~~~~-~-~-~i~~-~~~~~~~~~~~~~~~-----~d~~v~iwd~~~~~~~~~~~~~~~v---------------- 190 (264)
......... . + .+.+ -... ++.+++.++ .++.|.-+|.++|+.+..+....+.
T Consensus 143 ~~W~~~~~~~~~~~~~~ssP~v~--~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~ 220 (599)
T 1w6s_A 143 TVWKVENSDIKVGSTLTIAPYVV--KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHY 220 (599)
T ss_dssp EEEEEECCCGGGTCBCCSCCEEE--TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGG
T ss_pred EEEeecCCCCCccceeecCCEEE--CCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccc
Confidence 655433211 0 0 1110 0111 344555443 2689999999999998776543221
Q ss_pred -----------------------EEEEEcCCCcE-EEEeCC----------------CcEEEEECCCceeeeEEecCCC-
Q 024676 191 -----------------------TSAEVSRDGRY-ITTADG----------------SSVKFWDANHFGLVKGYNMPCN- 229 (264)
Q Consensus 191 -----------------------~~~~~s~~~~~-l~~~~~----------------~~i~iwd~~~~~~~~~~~~~~~- 229 (264)
...++.+...+ ++...+ ..|.-+|.++++.+=.|+...+
T Consensus 221 g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d 300 (599)
T 1w6s_A 221 GQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHD 300 (599)
T ss_dssp CCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTC
T ss_pred cccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCc
Confidence 12345455433 333222 3688899999988766765322
Q ss_pred ---------CceeeEcCCCC---CEEEEecCCCeEEEEEcCcceee
Q 024676 230 ---------TESASLEPKLG---NIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 230 ---------~~~~~~~~~~~---~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
+........+| ..++.++.++.+++.|.++|+.+
T Consensus 301 ~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 346 (599)
T 1w6s_A 301 EWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALV 346 (599)
T ss_dssp SSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred cccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEe
Confidence 11111110235 57888999999999999999875
No 277
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.08 E-value=0.0027 Score=51.66 Aligned_cols=217 Identities=7% Similarity=-0.098 Sum_probs=131.7
Q ss_pred CCcEEEeCCCCceEEeeeCCcCCEEEEEECCCC-cEEEEecCCCeEEEEeCCC----CcEEEEee-cCCeEEEEEECCCC
Q 024676 41 SSPMLRNGETGDWIGTFEGHKGAVWSCCLDANA-LFSASGSADFTAKLWDALT----GDEKHSFE-HKHIVRACAFSEDT 114 (264)
Q Consensus 41 ~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~-~~l~s~s~D~~v~iwd~~~----~~~~~~~~-~~~~v~~~~~~~~~ 114 (264)
..|+..++.+.+....+.. .....+++|++++ ....+-..++.|..++..+ ......+. .-.....+++++.+
T Consensus 10 ~~I~~i~~~~~~~~~~~~~-~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~ 88 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 88 (316)
T ss_dssp SSEEEEETTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred CeEEEEECCCcceEehhcC-CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecC
Confidence 4577888877665444432 3456789999765 4556667778999999876 22222222 11345778888755
Q ss_pred CEEE-EeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCC-CeEEEEECCCCceeEEe-cCCCCEE
Q 024676 115 HLLL-TGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS-GGVRLWDARSGKIVQTL-ETKSPVT 191 (264)
Q Consensus 115 ~~l~-s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d-~~v~iwd~~~~~~~~~~-~~~~~v~ 191 (264)
..|+ +-...+.|.+.+++.... .............++..|.++.++.+.... +.|...++......... ..-...+
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~ 167 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVKR-KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPN 167 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSSE-EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEE
T ss_pred CeEEEEECCCCEEEEEeCCCCce-EEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCce
Confidence 5454 445678899999864321 122222234567788877778777776543 68888888643322222 2234578
Q ss_pred EEEEcCCCcEE-EEe-CCCcEEEEECCCceeeeEE-ec---CCCCceeeEcCCCCCEEEEecCCCeEEEEEcCccee
Q 024676 192 SAEVSRDGRYI-TTA-DGSSVKFWDANHFGLVKGY-NM---PCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (264)
Q Consensus 192 ~~~~s~~~~~l-~~~-~~~~i~iwd~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~ 262 (264)
.++++|++..| .+- ..+.|..+|+.... .+.+ .. ...+..+++. .+.++++-...+.|..+|..+|+.
T Consensus 168 gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~--~~~ly~~d~~~~~V~~~~~~~g~~ 241 (316)
T 1ijq_A 168 GITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSD 241 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCC
T ss_pred EEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEeecCCccCCcEEEEEE--CCEEEEEECCCCeEEEEeCCCCcc
Confidence 99999876543 443 34689999986432 2222 21 1233444553 377888888889999999777764
No 278
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.07 E-value=0.0036 Score=52.78 Aligned_cols=206 Identities=13% Similarity=-0.051 Sum_probs=123.0
Q ss_pred CCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCC----ceEEeeeCCcCCEEEEEECC-CCcEEEEecCCCeEEEEeC
Q 024676 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG----DWIGTFEGHKGAVWSCCLDA-NALFSASGSADFTAKLWDA 90 (264)
Q Consensus 16 ~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~----~~~~~~~~H~~~V~~v~~~~-~~~~l~s~s~D~~v~iwd~ 90 (264)
...+.+|+|++ .++....+-...+.|+.++.... .....+.........+++++ .+.+.++-...+.|.+.+.
T Consensus 111 ~~~~~~l~~d~--~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~ 188 (400)
T 3p5b_L 111 LRNVVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 188 (400)
T ss_dssp CSCEEEEEEET--TTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred cCcceEEeeee--ccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeC
Confidence 34456788875 23444445455566766776542 12222232334567888887 4555567677889999998
Q ss_pred CCCcEEEEee-cCCeEEEEEECCCCCEEEEeeC--CCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCC
Q 024676 91 LTGDEKHSFE-HKHIVRACAFSEDTHLLLTGGF--EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS 167 (264)
Q Consensus 91 ~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~--d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d 167 (264)
........+. .-.....++++|.+..|+-+.+ .+.|...+++.... .......-.....+++.+.++.+..+-...
T Consensus 189 ~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~-~~~~~~~l~~P~glavd~~~~~lY~aD~~~ 267 (400)
T 3p5b_L 189 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTENIQWPNGITLDLLSGRLYWVDSKL 267 (400)
T ss_dssp TTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC-EEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc-EEEEECCCCceEEEEEEeCCCEEEEEECCC
Confidence 7665444443 2334788999997666665543 36788888764322 222222224567889888888888877777
Q ss_pred CeEEEEECCCCceeEEecC---CCCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeeeEE
Q 024676 168 GGVRLWDARSGKIVQTLET---KSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGY 224 (264)
Q Consensus 168 ~~v~iwd~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~ 224 (264)
+.|..+|+........... ......+++..+..|++-...+.|..+|..+++.+..+
T Consensus 268 ~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i 327 (400)
T 3p5b_L 268 HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLL 327 (400)
T ss_dssp TEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEE
T ss_pred CEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEE
Confidence 8999999875443222221 23355677754433444444578888887665444333
No 279
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.04 E-value=0.0076 Score=55.36 Aligned_cols=220 Identities=6% Similarity=-0.130 Sum_probs=132.5
Q ss_pred CCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCC-CcEEEEecCCCeEEEEeCCCC----cEEEEee-cCCeEEEEEECC
Q 024676 39 KDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDAN-ALFSASGSADFTAKLWDALTG----DEKHSFE-HKHIVRACAFSE 112 (264)
Q Consensus 39 ~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~-~~~l~s~s~D~~v~iwd~~~~----~~~~~~~-~~~~v~~~~~~~ 112 (264)
....|+..++........+.+ ...+.+++|++. +.+.++-...+.|+.+++... .....+. .......+++++
T Consensus 402 n~~~Ir~i~l~~~~~~~l~~~-~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~ 480 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 480 (791)
T ss_dssp CBSSEEEECTTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEET
T ss_pred cccceeEeeccCCcceeeecC-CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeee
Confidence 345577777766554433333 345678999874 455566666788988887653 2222222 223456788988
Q ss_pred CCCEEEEe-eCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCC-CeEEEEECCCCceeEEecC-CCC
Q 024676 113 DTHLLLTG-GFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS-GGVRLWDARSGKIVQTLET-KSP 189 (264)
Q Consensus 113 ~~~~l~s~-~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d-~~v~iwd~~~~~~~~~~~~-~~~ 189 (264)
.++.|+.+ ...+.|.+.+++.... .............+++.+..+.++.+-... ..|...++........+.. -..
T Consensus 481 ~~~~LY~tD~~~~~I~v~~ldG~~~-~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~ 559 (791)
T 3m0c_C 481 IHSNIYWTDSVLGTVSVADTKGVKR-KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQW 559 (791)
T ss_dssp TTTEEEEEETTTTEEEEEETTSSSE-EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSC
T ss_pred cCCcEEEEecCCCeEEEEeCCCCeE-EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCC
Confidence 77555544 5568899999874332 222222334567888888777777775443 6799989875544333332 246
Q ss_pred EEEEEEcCCCcE-EEEe-CCCcEEEEECCCceeeeEEecC---CCCceeeEcCCCCCEEEEecCCCeEEEEEcCccee
Q 024676 190 VTSAEVSRDGRY-ITTA-DGSSVKFWDANHFGLVKGYNMP---CNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (264)
Q Consensus 190 v~~~~~s~~~~~-l~~~-~~~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~ 262 (264)
.+.|++.+.+.. +.+- ....|...++............ ..+..+++. .++++++-...+.|...|..+|+.
T Consensus 560 P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 560 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSD 635 (791)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCC
T ss_pred ceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCCCcc
Confidence 889999976544 3442 3467888888654332222221 123344443 367888888888898888777754
No 280
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.03 E-value=0.0079 Score=55.15 Aligned_cols=232 Identities=13% Similarity=0.078 Sum_probs=136.5
Q ss_pred CCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEee---------eCCcCCEEEEEECCCCcEEEEecCCCeEE
Q 024676 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTF---------EGHKGAVWSCCLDANALFSASGSADFTAK 86 (264)
Q Consensus 16 ~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~---------~~H~~~V~~v~~~~~~~~l~s~s~D~~v~ 86 (264)
...|.+|...+ +|. |-.|+.++-+..++..++.+.... ......|.++...+++.+-+. ..++-+.
T Consensus 312 ~~~v~~i~~D~---~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWig-t~~~Gl~ 386 (781)
T 3v9f_A 312 NASARYIFQDS---FNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIG-TDGGGIN 386 (781)
T ss_dssp SSCEEEEEECS---SCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEE-EBSSCEE
T ss_pred CCeEEEEEEeC---CCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEE-eCCCcEE
Confidence 34577777664 555 445666667788887766543211 112357999999888766543 3334477
Q ss_pred EEeCCCCcEEEEe----ecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEec---cCCCCeEEEEEecCCCe
Q 024676 87 LWDALTGDEKHSF----EHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVG---NSSGSIRTVAWLHSDQT 159 (264)
Q Consensus 87 iwd~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~ 159 (264)
.||..++...... .....|.++...+++.+.+ |+.++-+..++..+++. .... .....+.++...+ ++.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~--~~~~~~~~~~~~v~~i~~d~-~g~ 462 (781)
T 3v9f_A 387 VFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKF--QIIELEKNELLDVRVFYEDK-NKK 462 (781)
T ss_dssp EEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEE--EECCSTTTCCCCEEEEEECT-TSE
T ss_pred EEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcE--EEeccCCCCCCeEEEEEECC-CCC
Confidence 7886554321110 1235688888888887665 66666788888754422 1111 1234577766544 344
Q ss_pred EEEEeeCCCeEEEEECCCCceeEEecC------CCCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeeeEEecCC----C
Q 024676 160 ILSSCTDSGGVRLWDARSGKIVQTLET------KSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPC----N 229 (264)
Q Consensus 160 ~~~~~~~d~~v~iwd~~~~~~~~~~~~------~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~----~ 229 (264)
+.++ .. +.|..+|.++++....... ...+.++...++|.+.++..++.+..||..+.+ ++.+.... .
T Consensus 463 lwig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~-~~~~~~~~~l~~~ 539 (781)
T 3v9f_A 463 IWIG-TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQL-VRKFNQYEGFCSN 539 (781)
T ss_dssp EEEE-ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCE-EEEECTTTTCSCS
T ss_pred EEEE-EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCe-EEEccCCCCCCCC
Confidence 4433 44 6799999988765433221 356899999999998887765567788876654 33443211 1
Q ss_pred -CceeeEcCCCCCEEEEecCCCeEEEEEcCcce
Q 024676 230 -TESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 230 -~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~ 261 (264)
...+...+ .|.+. .|+.+|.+..||..+++
T Consensus 540 ~i~~i~~d~-~g~lW-i~T~~Glv~~~d~~~~~ 570 (781)
T 3v9f_A 540 TINQIYRSS-KGQMW-LATGEGLVCFPSARNFD 570 (781)
T ss_dssp CEEEEEECT-TSCEE-EEETTEEEEESCTTTCC
T ss_pred eeEEEEECC-CCCEE-EEECCCceEEECCCCCc
Confidence 12333333 35544 44447765888876553
No 281
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.02 E-value=0.0041 Score=51.39 Aligned_cols=219 Identities=7% Similarity=-0.112 Sum_probs=133.6
Q ss_pred CCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCC-cEEEEecCCCeEEEEeCCCCcEEEEeec-CCeEEEEEECCCCCEE
Q 024676 40 DSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANA-LFSASGSADFTAKLWDALTGDEKHSFEH-KHIVRACAFSEDTHLL 117 (264)
Q Consensus 40 d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~-~~l~s~s~D~~v~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~l 117 (264)
...|+..+.........+.+. .....++|++.+ .+..+-...+.|..++...+........ ......+++++.+..|
T Consensus 52 ~~~I~~i~~~g~~~~~~~~~~-~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~l 130 (349)
T 3v64_C 52 RIDIRQVLPHRSEYTLLLNNL-ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKL 130 (349)
T ss_dssp BSCEEEECTTSCCEEEEECSC-SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEE
T ss_pred ccceEEEeCCCCeeEEeecCC-CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeE
Confidence 345777777655544334433 346789999654 4556666778899999877654333322 2335678888855555
Q ss_pred -EEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCC-CeEEEEECCCCceeEEec-CCCCEEEEE
Q 024676 118 -LTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS-GGVRLWDARSGKIVQTLE-TKSPVTSAE 194 (264)
Q Consensus 118 -~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d-~~v~iwd~~~~~~~~~~~-~~~~v~~~~ 194 (264)
.+-...+.|.+.+++.... .............++..|.++.++.+-... +.|...++.......... .-...+.++
T Consensus 131 y~~d~~~~~I~~~~~dG~~~-~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla 209 (349)
T 3v64_C 131 YWTDSGTSRIEVANLDGAHR-KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLT 209 (349)
T ss_dssp EEEETTTTEEEEEETTSCSC-EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEE
T ss_pred EEEcCCCCeEEEEcCCCCce-EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEE
Confidence 4445567899999864332 222222234567788888788877776665 788888887543322222 234578999
Q ss_pred EcCCCcE-EEEe-CCCcEEEEECCCceeeeEEec-CCCCceeeEcCCCCCEEEEecCCCeEEEEEcCccee
Q 024676 195 VSRDGRY-ITTA-DGSSVKFWDANHFGLVKGYNM-PCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (264)
Q Consensus 195 ~s~~~~~-l~~~-~~~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~ 262 (264)
++|++.. ..+- ..+.|..+|+........+.. ...+..+++. .+.++++-...+.|..+|..+|+.
T Consensus 210 ~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~--~~~ly~td~~~~~V~~~~~~~G~~ 278 (349)
T 3v64_C 210 IDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF--EDSLYWTDWHTKSINSANKFTGKN 278 (349)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCS
T ss_pred EeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE--CCEEEEecCCCCeEEEEEccCCCc
Confidence 9986544 3443 346899998764322211221 1233444552 467888888888898888656653
No 282
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.02 E-value=0.00016 Score=65.63 Aligned_cols=204 Identities=13% Similarity=-0.055 Sum_probs=115.1
Q ss_pred eeeeEeccCCCCCeEEEEEeCCCCcEEEeCCC----CceEEeeeCCcCCEEEEEECC-CCcEEEEecCCCeEEEEeCCCC
Q 024676 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNGET----GDWIGTFEGHKGAVWSCCLDA-NALFSASGSADFTAKLWDALTG 93 (264)
Q Consensus 19 v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~----~~~~~~~~~H~~~V~~v~~~~-~~~~l~s~s~D~~v~iwd~~~~ 93 (264)
+.+|+|++ ..+.+.++-...+.|+.+++.. ......+.........+++.+ .+.+.++-...+.|.+.+....
T Consensus 408 p~gla~d~--~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 408 VVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp CCCCEEET--TTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred eEEEcccc--ccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 44677875 2334444444556788887764 121112211112234677875 3445556566788999998765
Q ss_pred cEEEEeec-CCeEEEEEECCCCCEEEEeeC-C-CcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeE
Q 024676 94 DEKHSFEH-KHIVRACAFSEDTHLLLTGGF-E-KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGV 170 (264)
Q Consensus 94 ~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~-d-~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v 170 (264)
.....+.. ......++++|.+..|+.+.. . +.|..+++..... .......-.....+++.+.++.++++-...+.|
T Consensus 486 ~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~-~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I 564 (699)
T 1n7d_A 486 KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 564 (699)
T ss_dssp CEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC-CEESCSSCSSCCCEEECTTTCCEEEEETTTTEE
T ss_pred ceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe-eEEEeCCCCCccEEEEeccCCEEEEEecCCCeE
Confidence 54333322 234567889986655555443 2 6777777653322 122111122345678888777787777777899
Q ss_pred EEEECCCCceeEEecC---CCCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeeeEEe
Q 024676 171 RLWDARSGKIVQTLET---KSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYN 225 (264)
Q Consensus 171 ~iwd~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~ 225 (264)
..+|+........+.. ......+++..+..|++....+.|..+|..+++.+..+.
T Consensus 565 ~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 565 SSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp EEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred EEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEee
Confidence 9999975433222221 122345566555334444445789999988777665554
No 283
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.96 E-value=0.0029 Score=53.99 Aligned_cols=195 Identities=11% Similarity=0.055 Sum_probs=110.6
Q ss_pred EEEEEECCC---CcEEEEecCCCeEEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEEeeCC---Cc-EEEeeCCCCCC
Q 024676 64 VWSCCLDAN---ALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFE---KI-LRIFDLNRPDA 136 (264)
Q Consensus 64 V~~v~~~~~---~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~-i~~~d~~~~~~ 136 (264)
-..++++++ +.+.++-.. +.|+.+|..++..............++++++++++++-... .. +...+......
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~ 219 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFT 219 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTC
T ss_pred CceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCee
Confidence 467899984 554444333 88999998877665555445568899999999955443311 11 22233221111
Q ss_pred CCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEe-c--CCCCEEEEEEcCCCcE-EEEe-CCCcEE
Q 024676 137 PPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTL-E--TKSPVTSAEVSRDGRY-ITTA-DGSSVK 211 (264)
Q Consensus 137 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~-~--~~~~v~~~~~s~~~~~-l~~~-~~~~i~ 211 (264)
...... .......+++.+.++.+.++...++.|+.+|..+++....+ . .......++++|++++ +++. ....|+
T Consensus 220 ~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~ 298 (433)
T 4hw6_A 220 ERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIY 298 (433)
T ss_dssp CEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEE
T ss_pred cccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEE
Confidence 001111 11223445666646667766666789999999877652222 1 2222456999999974 4443 356888
Q ss_pred EEECC--Ccee--eeEEecC----------------CCCceeeEc--------CCCCCEEEEecCCCeEEEEEcCcce
Q 024676 212 FWDAN--HFGL--VKGYNMP----------------CNTESASLE--------PKLGNIFIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 212 iwd~~--~~~~--~~~~~~~----------------~~~~~~~~~--------~~~~~~~~~gs~d~~v~vwd~~~g~ 261 (264)
.++.. +... ...+... ..+..+++. ...+.++++=..+..|+.++. +|+
T Consensus 299 ~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~ 375 (433)
T 4hw6_A 299 RVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGR 375 (433)
T ss_dssp EEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSE
T ss_pred EEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCC
Confidence 87754 2211 1112110 012234441 234778888888888998875 453
No 284
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.92 E-value=0.0014 Score=55.97 Aligned_cols=151 Identities=10% Similarity=0.042 Sum_probs=93.1
Q ss_pred EEEEEECC-CCcEEEEecCCCeEEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEEeeCC-C----cEEEeeCCCCCCC
Q 024676 64 VWSCCLDA-NALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGGFE-K----ILRIFDLNRPDAP 137 (264)
Q Consensus 64 V~~v~~~~-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-~----~i~~~d~~~~~~~ 137 (264)
...++++| ++..|..+...+.|+.+|..++..............++++++++.|+.+... + .+.+++.. +...
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~~ 217 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGFK 217 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTSC
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Ccee
Confidence 36788997 3444444443478999998877654444445568899999999966665541 2 23334432 2222
Q ss_pred C-eEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeE--EecCCCCEEEEEEcCCCcE-EEEe-CCCcEEE
Q 024676 138 P-REVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQ--TLETKSPVTSAEVSRDGRY-ITTA-DGSSVKF 212 (264)
Q Consensus 138 ~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~--~~~~~~~v~~~~~s~~~~~-l~~~-~~~~i~i 212 (264)
. ..+.. ......+++.+.++.++++...++.|..+|..++.... ........+.++++|+|++ +++. ....|..
T Consensus 218 ~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~ 296 (430)
T 3tc9_A 218 VITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILR 296 (430)
T ss_dssp SEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEE
Confidence 1 12211 22345566777567777776677899999998776422 2222334678999999984 4443 3568888
Q ss_pred EECC
Q 024676 213 WDAN 216 (264)
Q Consensus 213 wd~~ 216 (264)
++..
T Consensus 297 ~~~d 300 (430)
T 3tc9_A 297 SDYD 300 (430)
T ss_dssp EEEE
T ss_pred EeCC
Confidence 7654
No 285
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.89 E-value=0.015 Score=53.41 Aligned_cols=232 Identities=9% Similarity=0.065 Sum_probs=132.3
Q ss_pred CCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeee-------CCcCCEEEEEECCCCcEEEEecCCCeEEEEe
Q 024676 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFE-------GHKGAVWSCCLDANALFSASGSADFTAKLWD 89 (264)
Q Consensus 17 ~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~-------~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd 89 (264)
..|.+|...+ +|++.+. +.. -+.+++..++++..... .....|+++...+++.+.+....+| +.++|
T Consensus 211 ~~i~~i~~d~---~g~lwig-t~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~~G-l~~~~ 284 (781)
T 3v9f_A 211 NDVRCIYKDT---NGNIWIG-TSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATELNG-IMILD 284 (781)
T ss_dssp SSEEEEEECT---TCCEEEE-ETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEEEESSSC-EEEEE
T ss_pred CceeEEEEcC---CCCEEEE-eCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCCCC-eEEEC
Confidence 3466776653 5655544 444 57788887766432211 1245799999988887655433244 77788
Q ss_pred CCCCcEEEEee---------------cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEe--------ccCCC
Q 024676 90 ALTGDEKHSFE---------------HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREV--------GNSSG 146 (264)
Q Consensus 90 ~~~~~~~~~~~---------------~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~--------~~~~~ 146 (264)
..++....... ....|.++..++++.+.+ |+.++-+..++........... .-...
T Consensus 285 ~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 363 (781)
T 3v9f_A 285 LQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWI-GTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNK 363 (781)
T ss_dssp TTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEE-EEBSSCEEEECSSCCSCEEEC----CCCSSCCSSS
T ss_pred CCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEE-EecCCeEEEeCCCCCcceeeccCccccccCCCCCc
Confidence 76654221111 234689999999887554 6667778888875433211100 01234
Q ss_pred CeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEe----cCCCCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeee
Q 024676 147 SIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTL----ETKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVK 222 (264)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~ 222 (264)
.+.++...++ +.+.+ ++.++.|..||..+++...-. .....|.++...++|.+.++..++.+..+|.++++. +
T Consensus 364 ~v~~i~~d~~-g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~-~ 440 (781)
T 3v9f_A 364 VVSSVCDDGQ-GKLWI-GTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKF-Q 440 (781)
T ss_dssp CEEEEEECTT-SCEEE-EEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEE-E
T ss_pred ceEEEEEcCC-CCEEE-EeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcE-E
Confidence 5777765443 33433 344567999998765432211 123568899999999888877667788899876543 3
Q ss_pred EEec---CC-CCceeeEcCCCCCEEEEecCCCeEEEEEcCcce
Q 024676 223 GYNM---PC-NTESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 223 ~~~~---~~-~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~ 261 (264)
.+.. .. ...++...+ .+. +..|.. +-+..||..+++
T Consensus 441 ~~~~~~~~~~~v~~i~~d~-~g~-lwigt~-~Gl~~~~~~~~~ 480 (781)
T 3v9f_A 441 IIELEKNELLDVRVFYEDK-NKK-IWIGTH-AGVFVIDLASKK 480 (781)
T ss_dssp ECCSTTTCCCCEEEEEECT-TSE-EEEEET-TEEEEEESSSSS
T ss_pred EeccCCCCCCeEEEEEECC-CCC-EEEEEC-CceEEEeCCCCe
Confidence 3322 11 122333333 344 455555 458888876653
No 286
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.84 E-value=0.00057 Score=61.53 Aligned_cols=193 Identities=12% Similarity=0.111 Sum_probs=101.1
Q ss_pred EEEECC-CCcEEEEecCCC-----------eEEEEeCCCCcE--EEEee--cCCeEEEEEECCCCCEEEEeeC-CCcEEE
Q 024676 66 SCCLDA-NALFSASGSADF-----------TAKLWDALTGDE--KHSFE--HKHIVRACAFSEDTHLLLTGGF-EKILRI 128 (264)
Q Consensus 66 ~v~~~~-~~~~l~s~s~D~-----------~v~iwd~~~~~~--~~~~~--~~~~v~~~~~~~~~~~l~s~~~-d~~i~~ 128 (264)
.+++.+ +++.++.|+.+. .+.+||..++.- +.... +......+++.+++++++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 455666 788888776543 588899887752 22221 1222234567789999999885 467999
Q ss_pred eeCCCCCCCCeEecc--CCCCeEEEEEecCCCeEEEEeeCC-----CeEEEEECCCCceeEEec-----CCCCEEEEEEc
Q 024676 129 FDLNRPDAPPREVGN--SSGSIRTVAWLHSDQTILSSCTDS-----GGVRLWDARSGKIVQTLE-----TKSPVTSAEVS 196 (264)
Q Consensus 129 ~d~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~d-----~~v~iwd~~~~~~~~~~~-----~~~~v~~~~~s 196 (264)
||..+.+. ..... ..-.-..++..+++..+++++..+ ..+.+||..+++-...-. ....-....+.
T Consensus 270 yd~~t~~W--~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~ 347 (656)
T 1k3i_A 270 YDSSSDSW--IPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYR 347 (656)
T ss_dssp EEGGGTEE--EECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGT
T ss_pred ecCcCCce--eECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceee
Confidence 99865432 12111 111112334455555555554233 469999998876433200 00000001122
Q ss_pred CCCcE-EEEe---------CCCcEEEEECCCceeeeEEecC-C--------CCceee-EcCCCCCEEEEecCCC------
Q 024676 197 RDGRY-ITTA---------DGSSVKFWDANHFGLVKGYNMP-C--------NTESAS-LEPKLGNIFIAGGEDM------ 250 (264)
Q Consensus 197 ~~~~~-l~~~---------~~~~i~iwd~~~~~~~~~~~~~-~--------~~~~~~-~~~~~~~~~~~gs~d~------ 250 (264)
.+++. +.++ ....+..||..+..-....... . ...... +....+++++.||.++
T Consensus 348 ~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~ 427 (656)
T 1k3i_A 348 SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDA 427 (656)
T ss_dssp TTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBC
T ss_pred cCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCc
Confidence 33332 3332 2346788888765433222111 0 011222 2223578899998643
Q ss_pred -----eEEEEEcCcc
Q 024676 251 -----WVHVFDFHTG 260 (264)
Q Consensus 251 -----~v~vwd~~~g 260 (264)
.+.+||..+.
T Consensus 428 ~~~~~~v~~yd~~~~ 442 (656)
T 1k3i_A 428 TTNAHIITLGEPGTS 442 (656)
T ss_dssp CCCEEEEECCSTTSC
T ss_pred CCcceEEEcCCCCCC
Confidence 6778876654
No 287
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.82 E-value=0.0041 Score=49.92 Aligned_cols=223 Identities=12% Similarity=0.096 Sum_probs=107.7
Q ss_pred CCeEEEEEe-CC-----CCcEEEeCCCCceEEe--eeCCcCCEEEEEECCCCcEEEEecCC-----CeEEEEeCCCCc--
Q 024676 30 DGFFLVSAS-KD-----SSPMLRNGETGDWIGT--FEGHKGAVWSCCLDANALFSASGSAD-----FTAKLWDALTGD-- 94 (264)
Q Consensus 30 ~g~~l~t~s-~d-----~~v~i~~~~~~~~~~~--~~~H~~~V~~v~~~~~~~~l~s~s~D-----~~v~iwd~~~~~-- 94 (264)
++..++.|+ .+ ..+.++|..++++... +...+.. .+++ ..++..++.|+.+ ..+.+||..+..
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~-~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRY-VASV-SLHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBS-CEEE-EETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhcc-ccEE-EECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 455666666 33 3577889988876432 2111111 1112 2246666666654 368889987765
Q ss_pred -EEEEee--cCCe-EEEEEECCCCCEEEEeeCC-----CcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEee
Q 024676 95 -EKHSFE--HKHI-VRACAFSEDTHLLLTGGFE-----KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT 165 (264)
Q Consensus 95 -~~~~~~--~~~~-v~~~~~~~~~~~l~s~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 165 (264)
-..... .... -..+.+ ++++++.|+.+ ..+.+||..+.+.......+..-.-..++.. ++.+++.++
T Consensus 92 ~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG 167 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGG 167 (301)
T ss_dssp CCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECC
T ss_pred eeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECC
Confidence 222211 1111 111222 56677777653 3477888765442211111111111122222 334444443
Q ss_pred CC-----CeEEEEECCCCceeEEecCCCC--EEEEEEcCCCcEEEE-eCC-----CcEEEEECCCceeeeEEecCCCCc-
Q 024676 166 DS-----GGVRLWDARSGKIVQTLETKSP--VTSAEVSRDGRYITT-ADG-----SSVKFWDANHFGLVKGYNMPCNTE- 231 (264)
Q Consensus 166 ~d-----~~v~iwd~~~~~~~~~~~~~~~--v~~~~~s~~~~~l~~-~~~-----~~i~iwd~~~~~~~~~~~~~~~~~- 231 (264)
.+ ..+.+||+.+.+-...-....+ -.++... ++++++. +.+ ..+.+||+.+.+-...-..+....
T Consensus 168 ~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~ 246 (301)
T 2vpj_A 168 YDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL-NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCY 246 (301)
T ss_dssp BCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS
T ss_pred CCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE-CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccc
Confidence 22 4588999988764332111111 1122222 4555444 332 468899998654222112222111
Q ss_pred -eeeEcCCCCCEEEEecCC-----CeEEEEEcCcce
Q 024676 232 -SASLEPKLGNIFIAGGED-----MWVHVFDFHTGE 261 (264)
Q Consensus 232 -~~~~~~~~~~~~~~gs~d-----~~v~vwd~~~g~ 261 (264)
..... .+++++.||.+ ..+.+||.++.+
T Consensus 247 ~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 247 VGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp CEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred eeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 12222 47788888876 467888887643
No 288
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.81 E-value=0.02 Score=52.61 Aligned_cols=202 Identities=13% Similarity=-0.052 Sum_probs=119.0
Q ss_pred CCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCC----ceEEeeeCCcCCEEEEEECCCC-cEEEEecCCCeEEEEeCC
Q 024676 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG----DWIGTFEGHKGAVWSCCLDANA-LFSASGSADFTAKLWDAL 91 (264)
Q Consensus 17 ~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~----~~~~~~~~H~~~V~~v~~~~~~-~~l~s~s~D~~v~iwd~~ 91 (264)
..+.+|+|.+ .+++..++-...+.|+.+++... .....+.........|++++.+ .+.++-...+.|.+.++.
T Consensus 424 ~~~~gl~~d~--~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 424 RNVVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp SSEEEEEEET--TTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CceEEEeecc--cCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 3455777775 23455555555566766776542 2222233233445678888766 445677778899999987
Q ss_pred CCcEEEEee-cCCeEEEEEECCCCCEEEEeeCC--CcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCC
Q 024676 92 TGDEKHSFE-HKHIVRACAFSEDTHLLLTGGFE--KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSG 168 (264)
Q Consensus 92 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d--~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~ 168 (264)
.......+. .-.....++++|....|+.+.+. ..|...+++.... .......-.....+++.+.++.++++-....
T Consensus 502 G~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~-~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~ 580 (791)
T 3m0c_C 502 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTENIQWPNGITLDLLSGRLYWVDSKLH 580 (791)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce-EEEEeCCCCCceEEEEecCCCeEEEEeCCCC
Confidence 665444333 23457899999986666665432 6788888764322 2222222245678888877788877766667
Q ss_pred eEEEEECCCCceeEEecC---CCCEEEEEEcCCCcEEEEeCCCcEEEEECCCceee
Q 024676 169 GVRLWDARSGKIVQTLET---KSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLV 221 (264)
Q Consensus 169 ~v~iwd~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~ 221 (264)
.|...|+........+.. -.....+++..+..|++-...+.|...|..+++.+
T Consensus 581 ~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~ 636 (791)
T 3m0c_C 581 SISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDV 636 (791)
T ss_dssp EEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCC
T ss_pred cEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcce
Confidence 899999876543333221 12345677654423333334567877776655443
No 289
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.80 E-value=0.0094 Score=48.56 Aligned_cols=218 Identities=8% Similarity=-0.104 Sum_probs=129.3
Q ss_pred CCCcEEEeCCCCc--eEEeeeCCcCCEEEEEECCC-CcEEEEecCCCeEEEEeCCCCcEE-EEe-ecCCeEEEEEECCCC
Q 024676 40 DSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDAN-ALFSASGSADFTAKLWDALTGDEK-HSF-EHKHIVRACAFSEDT 114 (264)
Q Consensus 40 d~~v~i~~~~~~~--~~~~~~~H~~~V~~v~~~~~-~~~l~s~s~D~~v~iwd~~~~~~~-~~~-~~~~~v~~~~~~~~~ 114 (264)
...|+..++.... ....+.+ .....+++|++. +.+..+-...+.|..++...+... ... ..-.....+++++.+
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~-~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~ 90 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGG-LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 90 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEE-EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTT
T ss_pred cCeEEEEECCCCceEEEEEecC-CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCC
Confidence 3457777776553 2222222 124567889875 455567677788999998765321 111 122345678888755
Q ss_pred CEE-EEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEee-CCCeEEEEECCCCceeEEe-cCCCCEE
Q 024676 115 HLL-LTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT-DSGGVRLWDARSGKIVQTL-ETKSPVT 191 (264)
Q Consensus 115 ~~l-~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~d~~v~iwd~~~~~~~~~~-~~~~~v~ 191 (264)
..| .+-...+.|.+++++.... .............++..|.++.++.+.. ..+.|...++......... ..-...+
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~~-~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pn 169 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSLR-KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPN 169 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEE
T ss_pred CeEEEEECCCCEEEEEECCCCcE-EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCcc
Confidence 444 4445567899999864322 2222223345677887777777776653 2478888888743322222 2234578
Q ss_pred EEEEcCCCc-EEEEe-CCCcEEEEECCCceeeeEEec--CCCCceeeEcCCCCCEEEEecCCCeEEEEEcCccee
Q 024676 192 SAEVSRDGR-YITTA-DGSSVKFWDANHFGLVKGYNM--PCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (264)
Q Consensus 192 ~~~~s~~~~-~l~~~-~~~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~ 262 (264)
.++++|++. +..+- ..+.|..+|+..... +.+.. ...+..+++. .+.++++-...+.|..++..+|+.
T Consensus 170 glavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~~P~glav~--~~~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 170 GLTLDYEEQKLYWADAKLNFIHKSNLDGTNR-QAVVKGSLPHPFALTLF--EDILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSCCSCEEEEEEE--TTEEEEEETTTTEEEEEETTTCCS
T ss_pred EEEEeccCCEEEEEECCCCEEEEEcCCCCce-EEEecCCCCCceEEEEe--CCEEEEEecCCCeEEEEECCCCCc
Confidence 999998654 44443 356899999864322 22211 1233344443 367788888889999999877764
No 290
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.79 E-value=0.0099 Score=48.54 Aligned_cols=225 Identities=7% Similarity=-0.011 Sum_probs=117.7
Q ss_pred CCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCc-eEEeee--CCcCCEEEEEECCCCcEEEEecCCCeE-EEEeCC
Q 024676 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD-WIGTFE--GHKGAVWSCCLDANALFSASGSADFTA-KLWDAL 91 (264)
Q Consensus 16 ~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~-~~~~~~--~H~~~V~~v~~~~~~~~l~s~s~D~~v-~iwd~~ 91 (264)
...+.+|.|.| +..++. +.++.+.. ....|+ +..... .+.+.+..+.+.+++..++.+. ++.+ +-.|-
T Consensus 79 ~~~~~~i~~~~----~~~~~~-g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~Dg- 150 (327)
T 2xbg_A 79 DYRFNSVSFQG----NEGWIV-GEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYRTKDS- 150 (327)
T ss_dssp CCEEEEEEEET----TEEEEE-EETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEEESST-
T ss_pred CccEEEEEecC----CeEEEE-ECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEEEcCC-
Confidence 34677888874 344444 44554332 333343 332221 2345577788777777666654 4433 33332
Q ss_pred CCcEEEE--eecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEe-ccCCCCeEEEEEecCCCeEEEEeeCCC
Q 024676 92 TGDEKHS--FEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREV-GNSSGSIRTVAWLHSDQTILSSCTDSG 168 (264)
Q Consensus 92 ~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~d~ 168 (264)
+..... ......+..+.+.|++.+++.+......+..|-. + ...... ......+..+.+.+++. +++. ..+|
T Consensus 151 -G~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g-G-~tW~~~~~~~~~~~~~~~~~~~g~-~~~~-~~~G 225 (327)
T 2xbg_A 151 -GKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG-Q-TAWEPHNRTTSRRLHNMGFTPDGR-LWMI-VNGG 225 (327)
T ss_dssp -TSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTT-C-SSCEEEECCSSSCEEEEEECTTSC-EEEE-ETTT
T ss_pred -CCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC-C-CceeECCCCCCCccceeEECCCCC-EEEE-eCCc
Confidence 332222 2234568889999988877665444444444421 1 122222 22344667777766554 4443 3458
Q ss_pred eEEEEECCCCceeEEec-----CCCCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeeeEEe----cCCCCceeeEcCCC
Q 024676 169 GVRLWDARSGKIVQTLE-----TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYN----MPCNTESASLEPKL 239 (264)
Q Consensus 169 ~v~iwd~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~ 239 (264)
.+.+.+...++.-..+. ....+..+.+.+++.+++++.++.+ ++....++.-.... .+.....+.+.+
T Consensus 226 ~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~-- 302 (327)
T 2xbg_A 226 KIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFS-- 302 (327)
T ss_dssp EEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEE--
T ss_pred eEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEEC--
Confidence 88776433233211111 1234788889988888887777666 33333332222222 122334454543
Q ss_pred CCEEEEecCCCeEEEEE
Q 024676 240 GNIFIAGGEDMWVHVFD 256 (264)
Q Consensus 240 ~~~~~~gs~d~~v~vwd 256 (264)
+..+++++.+|.|.-++
T Consensus 303 ~~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 303 PDQGFILGQKGILLRYV 319 (327)
T ss_dssp TTEEEEECSTTEEEEEC
T ss_pred CCceEEEcCCceEEEEc
Confidence 34466777889877665
No 291
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.71 E-value=0.015 Score=50.34 Aligned_cols=151 Identities=11% Similarity=0.023 Sum_probs=92.5
Q ss_pred EEEEEECCC-Cc-EEEEecCCCeEEEEeCCCCcEEEEeecC----CeEEEEEE-------CCCCCEEEEeeCCC------
Q 024676 64 VWSCCLDAN-AL-FSASGSADFTAKLWDALTGDEKHSFEHK----HIVRACAF-------SEDTHLLLTGGFEK------ 124 (264)
Q Consensus 64 V~~v~~~~~-~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~----~~v~~~~~-------~~~~~~l~s~~~d~------ 124 (264)
-..|+|+|. +. ++++-...+.|++.|..++......... .....++| +++++.|+.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 467899983 44 4444444467888898887655444321 24788999 99999777665543
Q ss_pred -cEEEeeCCC-CCCCC----eEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECC-------CCce-----------
Q 024676 125 -ILRIFDLNR-PDAPP----REVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDAR-------SGKI----------- 180 (264)
Q Consensus 125 -~i~~~d~~~-~~~~~----~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~-------~~~~----------- 180 (264)
.+.+++... +.... ..... -.....++..+.++.++++...++.|..+|+. ++..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred ceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 255565332 12221 12211 12234556677678888887788899999987 5543
Q ss_pred ---eEEecCCCCEEEEEEcCCCcE-EEE-eCCCcEEEEEC
Q 024676 181 ---VQTLETKSPVTSAEVSRDGRY-ITT-ADGSSVKFWDA 215 (264)
Q Consensus 181 ---~~~~~~~~~v~~~~~s~~~~~-l~~-~~~~~i~iwd~ 215 (264)
+...........++++|+|.+ +++ .....|+.++.
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 122233344678999999984 344 33567887554
No 292
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.69 E-value=0.026 Score=50.50 Aligned_cols=198 Identities=6% Similarity=-0.103 Sum_probs=119.8
Q ss_pred CCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCC-cEEEEecCCCeEEEEeCCCCcE
Q 024676 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANA-LFSASGSADFTAKLWDALTGDE 95 (264)
Q Consensus 17 ~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~-~~l~s~s~D~~v~iwd~~~~~~ 95 (264)
....+|+|++ .+++...+-..++.|+.++.........+..-......+++++.+ .+..+-...+.|.+.+......
T Consensus 37 ~~~~~l~~d~--~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~ 114 (628)
T 4a0p_A 37 KEASALDFDV--TDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR 114 (628)
T ss_dssp SCEEEEEEET--TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC
T ss_pred CceEEEEEEC--CCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE
Confidence 3455888886 245555565666777777776443322232222345678887654 4446666678899999866543
Q ss_pred EEEe-ecCCeEEEEEECCCCCEEEEeeC--CCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEE
Q 024676 96 KHSF-EHKHIVRACAFSEDTHLLLTGGF--EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRL 172 (264)
Q Consensus 96 ~~~~-~~~~~v~~~~~~~~~~~l~s~~~--d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~i 172 (264)
.... ..-...+.++++|....|+-+.+ ...|...+++.... ..+...-.....+++.+.++.+..+-...+.|..
T Consensus 115 ~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~--~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~ 192 (628)
T 4a0p_A 115 QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER--TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIES 192 (628)
T ss_dssp EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC--EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce--EEEECCCCCcceEEEccccCEEEEEECCCCEEEE
Confidence 3333 22334689999996666665543 45677777764432 2222333456788888877888888777789999
Q ss_pred EECCCCceeEEecCCCCEEEEEEcCCCcEEEEe-CCCcEEEEECCCce
Q 024676 173 WDARSGKIVQTLETKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFG 219 (264)
Q Consensus 173 wd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~~~i~iwd~~~~~ 219 (264)
.|+.................+++..+ .++.+. ..+.|...|..+++
T Consensus 193 ~d~dG~~~~v~~~~l~~P~glav~~~-~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 193 SNMLGLNREVIADDLPHPFGLTQYQD-YIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp EETTSCSCEEEEECCSCEEEEEEETT-EEEEEETTTTEEEEEETTTCC
T ss_pred EcCCCCceEEeeccCCCceEEEEECC-EEEEecCCCCEEEEEECCCCC
Confidence 99976543211122233557777654 444443 35678888865543
No 293
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.69 E-value=0.00051 Score=62.37 Aligned_cols=220 Identities=7% Similarity=-0.103 Sum_probs=121.9
Q ss_pred CCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEE-EEecCCCeEEEEeCCC----CcEEEEee-cCCeEEEEEECCC
Q 024676 40 DSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFS-ASGSADFTAKLWDALT----GDEKHSFE-HKHIVRACAFSED 113 (264)
Q Consensus 40 d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l-~s~s~D~~v~iwd~~~----~~~~~~~~-~~~~v~~~~~~~~ 113 (264)
.+.|+..+..+.+....+..- ..+.+++|++.+..| ++-...+.|+.+++.. ......+. .......+++++.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~-~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNL-RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCC-TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred ccceEEEeCCCCcceeeeccC-cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 356777777766554443332 234578898765444 5555667898888765 22111111 1122356778764
Q ss_pred C-CEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCC-CeEEEEECCCCceeEEec-CCCCE
Q 024676 114 T-HLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDS-GGVRLWDARSGKIVQTLE-TKSPV 190 (264)
Q Consensus 114 ~-~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d-~~v~iwd~~~~~~~~~~~-~~~~v 190 (264)
+ +++++-...+.|.+++++.... .............+++.|.++.++.+.... +.|..+++.......... .-...
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~-~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~P 542 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKR-KTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWP 542 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCE-EEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSC
T ss_pred CCcEEEEeccCCeEEEEecCCCce-EEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCc
Confidence 4 4444445567899998764321 112111122345566666666666654333 678887776433222221 22346
Q ss_pred EEEEEcCCC-cEEEEe-CCCcEEEEECCCceeeeEEec---CCCCceeeEcCCCCCEEEEecCCCeEEEEEcCcceee
Q 024676 191 TSAEVSRDG-RYITTA-DGSSVKFWDANHFGLVKGYNM---PCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 191 ~~~~~s~~~-~~l~~~-~~~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
+.++++|++ +++.+- ..+.|..+|+........+.. ...+..+++.. +.++++....+.|..+|..+|+.+
T Consensus 543 nGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~--~~lywtd~~~~~V~~~d~~~G~~~ 618 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE--DKVFWTDIINEAIFSANRLTGSDV 618 (699)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEET--TEEEEECSTTTCEEEEETTTEEEE
T ss_pred cEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEEC--CEEEEEeCCCCeEEEEEccCCCce
Confidence 789999875 444443 356899999864322211111 12333444443 578888888899999998777653
No 294
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.67 E-value=0.022 Score=50.88 Aligned_cols=197 Identities=7% Similarity=-0.096 Sum_probs=109.9
Q ss_pred eeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCce-EEeeeCCcCCEEEEEECCC-CcEEEEecCCCeEEEEeCCCCcEE
Q 024676 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDW-IGTFEGHKGAVWSCCLDAN-ALFSASGSADFTAKLWDALTGDEK 96 (264)
Q Consensus 19 v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~-~~~~~~H~~~V~~v~~~~~-~~~l~s~s~D~~v~iwd~~~~~~~ 96 (264)
..+|+|++ .++....+=...+.|..++...... ...+..-......+++++. +.+.++-...+.|.+.+.......
T Consensus 42 ~~~ld~~~--~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~ 119 (619)
T 3s94_A 42 AAAVDFVF--SHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 119 (619)
T ss_dssp EEEEEEET--TTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred eEEEEEEe--CCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEE
Confidence 45677775 2344444444445566666654321 2223222245788999985 445566677889999998765433
Q ss_pred EEe-ecCCeEEEEEECCCCCEEEEeeC--CCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEE
Q 024676 97 HSF-EHKHIVRACAFSEDTHLLLTGGF--EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLW 173 (264)
Q Consensus 97 ~~~-~~~~~v~~~~~~~~~~~l~s~~~--d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iw 173 (264)
... ..-.....++++|.+..|+-+.+ ...|...+++... ........-.....+++.+.++.+..+-...+.|...
T Consensus 120 ~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~-~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~ 198 (619)
T 3s94_A 120 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKS 198 (619)
T ss_dssp EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCc-eEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEe
Confidence 333 22334568899997666665554 3556666665322 2222222234567788888778887777777889999
Q ss_pred ECCCCceeEEec-CCCCEEEEEEcCCCcEEEEe-CCCcEEEEECCCce
Q 024676 174 DARSGKIVQTLE-TKSPVTSAEVSRDGRYITTA-DGSSVKFWDANHFG 219 (264)
Q Consensus 174 d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~-~~~~i~iwd~~~~~ 219 (264)
|+.......... .......+++.++ .++.+. ..+.|...|..+++
T Consensus 199 ~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 199 NLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp SSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCC
T ss_pred cCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCc
Confidence 987644322222 1112345667666 333333 34678888876543
No 295
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.64 E-value=0.018 Score=47.04 Aligned_cols=189 Identities=12% Similarity=0.056 Sum_probs=105.9
Q ss_pred CCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCC-ceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCC-CCc
Q 024676 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETG-DWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL-TGD 94 (264)
Q Consensus 17 ~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~-~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~-~~~ 94 (264)
..+..|.+.+ ++..++.+ .++.+. .....| .+.....++...+..+++.+++.+++.+...+..+-+|-. ..-
T Consensus 122 ~~~~~i~~~~---~~~~~~~~-~~g~v~-~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW 196 (327)
T 2xbg_A 122 GSPRLIKALG---NGSAEMIT-NVGAIY-RTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAW 196 (327)
T ss_dssp SCEEEEEEEE---TTEEEEEE-TTCCEE-EESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSC
T ss_pred CCeEEEEEEC---CCCEEEEe-CCccEE-EEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCce
Confidence 3456676653 45655554 455442 233334 3555555666788999999999888777665555555531 111
Q ss_pred EEEEeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCC-CCCeEec--cCCCCeEEEEEecCCCeEEEEeeCCCeEE
Q 024676 95 EKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPD-APPREVG--NSSGSIRTVAWLHSDQTILSSCTDSGGVR 171 (264)
Q Consensus 95 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~-~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~d~~v~ 171 (264)
..........+..+.+.+++.+++ ++.++.++..+.+.++ ....... .....+..+.+.++ ..+++++. ++.|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~-~~~~~~g~-~g~i- 272 (327)
T 2xbg_A 197 EPHNRTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTP-NEVWLAGG-AGAL- 272 (327)
T ss_dssp EEEECCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSS-SCEEEEES-TTCE-
T ss_pred eECCCCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCC-CEEEEEeC-CCeE-
Confidence 222223445678888899887654 5566777666322111 0000111 11224677777664 44555544 4666
Q ss_pred EEECCCCceeEEec----CCCCEEEEEEcCCCcEEEEeCCCcEEEEE
Q 024676 172 LWDARSGKIVQTLE----TKSPVTSAEVSRDGRYITTADGSSVKFWD 214 (264)
Q Consensus 172 iwd~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~~~i~iwd 214 (264)
.+....|+.-..+. ....+..+.+.+++++++.+.++.|.-++
T Consensus 273 ~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 273 LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYV 319 (327)
T ss_dssp EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEEC
T ss_pred EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEc
Confidence 45555554333232 12457778887777888888888766554
No 296
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.64 E-value=0.013 Score=47.85 Aligned_cols=153 Identities=10% Similarity=0.070 Sum_probs=102.2
Q ss_pred eeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEE-eeeC----Cc--CCEEEEEE---CCCCcEEEEec----------
Q 024676 21 DLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIG-TFEG----HK--GAVWSCCL---DANALFSASGS---------- 80 (264)
Q Consensus 21 ~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~-~~~~----H~--~~V~~v~~---~~~~~~l~s~s---------- 80 (264)
+++|++ .+|.++++.-..++|..|+...+.... .+.+ .. ..+..+.| .+++.+++...
T Consensus 17 ~~~wd~--~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 17 DTIYDR--TRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CEEEET--TTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CccCcC--CCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 678886 356666666689999999998664332 3332 11 13578999 68887776433
Q ss_pred ---CCCeEEEEeCC---CCcEEEEeec-------------C-CeEEEEEECCCCCEEEEeeCC-CcEEEeeCCCCCCCCe
Q 024676 81 ---ADFTAKLWDAL---TGDEKHSFEH-------------K-HIVRACAFSEDTHLLLTGGFE-KILRIFDLNRPDAPPR 139 (264)
Q Consensus 81 ---~D~~v~iwd~~---~~~~~~~~~~-------------~-~~v~~~~~~~~~~~l~s~~~d-~~i~~~d~~~~~~~~~ 139 (264)
.+..|..+|+. +++.+..... . ...+.++.+++++..++++.- +.|...+.+... ..
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~--~~ 172 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKT--VS 172 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCC--EE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE--Ee
Confidence 26789999998 6765544331 1 247899999999999988887 777666654321 11
Q ss_pred Eec------cCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCC
Q 024676 140 EVG------NSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSG 178 (264)
Q Consensus 140 ~~~------~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~ 178 (264)
... ......+.+++.|++..+++..+ .+.+..+|+++.
T Consensus 173 ~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~p 216 (334)
T 2p9w_A 173 TFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKP 216 (334)
T ss_dssp EEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSS
T ss_pred eeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCC
Confidence 111 11122557888988877777766 799999998854
No 297
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.56 E-value=0.014 Score=46.88 Aligned_cols=221 Identities=8% Similarity=0.072 Sum_probs=106.7
Q ss_pred CeEEEEEeCC--CCcEEEeCCCCceEEe--eeCCcCCEEEEEECCCCcEEEEecCC----CeEEEEeCCCCcEEEEeecC
Q 024676 31 GFFLVSASKD--SSPMLRNGETGDWIGT--FEGHKGAVWSCCLDANALFSASGSAD----FTAKLWDALTGDEKHSFEHK 102 (264)
Q Consensus 31 g~~l~t~s~d--~~v~i~~~~~~~~~~~--~~~H~~~V~~v~~~~~~~~l~s~s~D----~~v~iwd~~~~~~~~~~~~~ 102 (264)
+..++.|+.+ ..+.+||..++++... +...+..-.++. .++..++.|+.+ ..+.++|..+..-.......
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 3455566553 4678889988876532 211111111122 256666677655 56788888776422221111
Q ss_pred Ce---EEEEEECCCCCEEEEeeCC------CcEEEeeCCCCCCCCeEeccCC--CCeEEEEEecCCCeEEEEeeC-----
Q 024676 103 HI---VRACAFSEDTHLLLTGGFE------KILRIFDLNRPDAPPREVGNSS--GSIRTVAWLHSDQTILSSCTD----- 166 (264)
Q Consensus 103 ~~---v~~~~~~~~~~~l~s~~~d------~~i~~~d~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~~~~~~----- 166 (264)
.+ -..+.+ ++++++.|+.+ ..+.+||..+.+. ....... -.-..++.. ++..+++++..
T Consensus 90 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W--~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~ 164 (306)
T 3ii7_A 90 TPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESW--HTKPSMLTQRCSHGMVEA-NGLIYVCGGSLGNNVS 164 (306)
T ss_dssp SCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEE--EEECCCSSCCBSCEEEEE-TTEEEEECCEESCTTT
T ss_pred ccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCce--EeCCCCcCCcceeEEEEE-CCEEEEECCCCCCCCc
Confidence 11 111122 56777777765 4577888765432 2221111 111122222 33333443321
Q ss_pred ---CCeEEEEECCCCceeEEecCCC--CEEEEEEcCCCcEEEE-eCC-----CcEEEEECCCce--eeeEEecCCCCcee
Q 024676 167 ---SGGVRLWDARSGKIVQTLETKS--PVTSAEVSRDGRYITT-ADG-----SSVKFWDANHFG--LVKGYNMPCNTESA 233 (264)
Q Consensus 167 ---d~~v~iwd~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~-~~~-----~~i~iwd~~~~~--~~~~~~~~~~~~~~ 233 (264)
-..+.+||+.+.+-...-.... .-.++... ++++++. +.+ ..+.+||+.+.+ .+.....+......
T Consensus 165 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 243 (306)
T 3ii7_A 165 GRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKC 243 (306)
T ss_dssp CEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEE
T ss_pred ccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeE
Confidence 2458899998876432211111 11122222 5555444 321 368889987653 22211111111112
Q ss_pred eEcCCCCCEEEEecCC-----CeEEEEEcCcce
Q 024676 234 SLEPKLGNIFIAGGED-----MWVHVFDFHTGE 261 (264)
Q Consensus 234 ~~~~~~~~~~~~gs~d-----~~v~vwd~~~g~ 261 (264)
... .+++++.||.+ ..+.+||..+.+
T Consensus 244 ~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 244 AAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred EEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 222 47788888854 568888887653
No 298
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.51 E-value=0.047 Score=48.81 Aligned_cols=220 Identities=8% Similarity=-0.105 Sum_probs=135.9
Q ss_pred CCCCcEEEeCCCCceEEeee-CCcCCEEEEEECCCCc-EEEEecCCCeEEEEeCCCCcEEEEeecC-CeEEEEEECCCCC
Q 024676 39 KDSSPMLRNGETGDWIGTFE-GHKGAVWSCCLDANAL-FSASGSADFTAKLWDALTGDEKHSFEHK-HIVRACAFSEDTH 115 (264)
Q Consensus 39 ~d~~v~i~~~~~~~~~~~~~-~H~~~V~~v~~~~~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~ 115 (264)
....|+..++++......+. ..-..+.+++|++.+. ...+-..++.|+.+++........+... .....+++++.+.
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~ 92 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK 92 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCC
Confidence 44567778887654332221 1224567899998654 4566677889999988765443333322 3456788887665
Q ss_pred EEEEe-eCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEee-CCCeEEEEECCCCceeEEecCCCCEEEE
Q 024676 116 LLLTG-GFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT-DSGGVRLWDARSGKIVQTLETKSPVTSA 193 (264)
Q Consensus 116 ~l~s~-~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~d~~v~iwd~~~~~~~~~~~~~~~v~~~ 193 (264)
.|+.+ ...+.|.+.+++.... .......-.....++..|..+.++.+-. ....|...++...........-...+.+
T Consensus 93 ~LY~tD~~~~~I~v~~~dG~~~-~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~Gl 171 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLDGQHR-QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGL 171 (628)
T ss_dssp EEEEEETTTTEEEEEETTSTTC-EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEE
T ss_pred EEEEEECCCCEEEEEecCCCcE-EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceE
Confidence 55544 4567888888864332 1222122335678888877777777653 2467888888765443333444568899
Q ss_pred EEcCCCcEE-EE-eCCCcEEEEECCCceeeeEEe-cCCCCceeeEcCCCCCEEEEecCCCeEEEEEcCccee
Q 024676 194 EVSRDGRYI-TT-ADGSSVKFWDANHFGLVKGYN-MPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (264)
Q Consensus 194 ~~s~~~~~l-~~-~~~~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~ 262 (264)
++++++..| .+ ...+.|...|+..... +.+. ....+..++++. +.++++-...+.|...|..+|+.
T Consensus 172 alD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~--~~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 172 TIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ--DYIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET--TEEEEEETTTTEEEEEETTTCCS
T ss_pred EEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC--CEEEEecCCCCEEEEEECCCCCc
Confidence 999976543 44 3356899999865432 2222 122344455543 67888888889999999777753
No 299
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.49 E-value=0.016 Score=46.40 Aligned_cols=222 Identities=14% Similarity=0.165 Sum_probs=104.7
Q ss_pred CCeEEEEEeCC----CCcEEEeCCCCceEEe--eeCCcCCEEEEEECCCCcEEEEecCC-----CeEEEEeCCCCcEEEE
Q 024676 30 DGFFLVSASKD----SSPMLRNGETGDWIGT--FEGHKGAVWSCCLDANALFSASGSAD-----FTAKLWDALTGDEKHS 98 (264)
Q Consensus 30 ~g~~l~t~s~d----~~v~i~~~~~~~~~~~--~~~H~~~V~~v~~~~~~~~l~s~s~D-----~~v~iwd~~~~~~~~~ 98 (264)
++..++.|+.+ ..+..+|..++++... +......-..+.+ ++..++.|+.+ ..+.+||..+..=...
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEE
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeC
Confidence 34555666643 3467788888876432 2111111111222 56666667654 3577888876642211
Q ss_pred ee--cCC-eEEEEEECCCCCEEEEeeCCC-----cEEEeeCCCCCCCCeEeccCCC--CeEEEEEecCCCeEEEEeeC--
Q 024676 99 FE--HKH-IVRACAFSEDTHLLLTGGFEK-----ILRIFDLNRPDAPPREVGNSSG--SIRTVAWLHSDQTILSSCTD-- 166 (264)
Q Consensus 99 ~~--~~~-~v~~~~~~~~~~~l~s~~~d~-----~i~~~d~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~~-- 166 (264)
.. ... .-..+. .++++++.|+.++ .+.+||+.+.+. ........ .-..++.. ++..+++++.+
T Consensus 93 ~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W--~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~ 167 (302)
T 2xn4_A 93 ANMRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNEW--FHVAPMNTRRSSVGVGVV-GGLLYAVGGYDVA 167 (302)
T ss_dssp CCCSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTEE--EEECCCSSCCBSCEEEEE-TTEEEEECCEETT
T ss_pred CCCCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCeE--eecCCCCCcccCceEEEE-CCEEEEEeCCCCC
Confidence 11 111 111122 2566777777553 366778765432 22211111 11122222 33333433321
Q ss_pred ----CCeEEEEECCCCceeEEe--cCCCCEEEEEEcCCCcEEEE-eCC-----CcEEEEECCCceeeeEEecCCCCc--e
Q 024676 167 ----SGGVRLWDARSGKIVQTL--ETKSPVTSAEVSRDGRYITT-ADG-----SSVKFWDANHFGLVKGYNMPCNTE--S 232 (264)
Q Consensus 167 ----d~~v~iwd~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~-~~~-----~~i~iwd~~~~~~~~~~~~~~~~~--~ 232 (264)
-..+.+||+.+.+-...- .....-.+++.. ++++++. +.+ ..+.+||..+.+=...-..+.... .
T Consensus 168 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~ 246 (302)
T 2xn4_A 168 SRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAG 246 (302)
T ss_dssp TTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCE
T ss_pred CCccccEEEEEeCCCCcEEECCCCccccccccEEEE-CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCe
Confidence 235889999887643321 111111122222 4555444 332 368899987653221111221111 1
Q ss_pred eeEcCCCCCEEEEecCCC-----eEEEEEcCcce
Q 024676 233 ASLEPKLGNIFIAGGEDM-----WVHVFDFHTGE 261 (264)
Q Consensus 233 ~~~~~~~~~~~~~gs~d~-----~v~vwd~~~g~ 261 (264)
.... .+++++.||.++ .+.+||..+.+
T Consensus 247 ~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 247 VCAV--NGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp EEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred EEEE--CCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 2222 477888888764 48889887653
No 300
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.47 E-value=0.043 Score=47.44 Aligned_cols=237 Identities=6% Similarity=-0.044 Sum_probs=129.7
Q ss_pred eeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeeeC---CcCCEEEEEE-------CCCCcEEEEecCCC-----
Q 024676 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFEG---HKGAVWSCCL-------DANALFSASGSADF----- 83 (264)
Q Consensus 19 v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~---H~~~V~~v~~-------~~~~~~l~s~s~D~----- 83 (264)
...|+|+|.. .+++.++-...+.+++.|..++.+...+.. .....+.++| ++++.+|+.+...+
T Consensus 141 p~~la~dp~~-~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 141 NGRLAFDPLN-KDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp EEEEEEETTE-EEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCEEEEccCC-CCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4578888621 234444444345678888887765433322 2234788999 99998555444332
Q ss_pred --eEEEEeCCC-CcEE-----EEeecCCeEEEEEECCCCCEEE-EeeCCCcEEEeeCC-------CCCC------C----
Q 024676 84 --TAKLWDALT-GDEK-----HSFEHKHIVRACAFSEDTHLLL-TGGFEKILRIFDLN-------RPDA------P---- 137 (264)
Q Consensus 84 --~v~iwd~~~-~~~~-----~~~~~~~~v~~~~~~~~~~~l~-s~~~d~~i~~~d~~-------~~~~------~---- 137 (264)
.|.+.+... +... ..+..-.....++.+|++..|+ +-..++.|..+|+. ++.. .
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred CceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 355665333 1111 1221111234667899554555 45566789999986 4443 0
Q ss_pred CeEe--ccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEEC--CCCcee--EEecC----------------CCCEE-EEE
Q 024676 138 PREV--GNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDA--RSGKIV--QTLET----------------KSPVT-SAE 194 (264)
Q Consensus 138 ~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~--~~~~~~--~~~~~----------------~~~v~-~~~ 194 (264)
...+ .........+++.|++..++++-.....|+.+|. .++... ..+-. -.... .++
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~ 379 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVF 379 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEE
Confidence 1111 1122345788999888766666666688998665 333210 11100 01233 455
Q ss_pred Ec-------CCCcEEEEe-CCCcEEEEECCCceeeeEEecCC-------------------------CCceeeEcCCCCC
Q 024676 195 VS-------RDGRYITTA-DGSSVKFWDANHFGLVKGYNMPC-------------------------NTESASLEPKLGN 241 (264)
Q Consensus 195 ~s-------~~~~~l~~~-~~~~i~iwd~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~ 241 (264)
.. +++.++++- ....|+.++. ++ .+.++.... .+..+++.+..+.
T Consensus 380 vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~ 457 (496)
T 3kya_A 380 VKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EG-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEM 457 (496)
T ss_dssp EECTTCCSSCCEEEEEEEGGGTEEEEECT-TC-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTE
T ss_pred EccccccccCCCeEEEEECCCCEEEEEeC-CC-CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCE
Confidence 54 556666554 3578999984 44 344443210 1123344443367
Q ss_pred EEEEecCCCeEEEEEcC
Q 024676 242 IFIAGGEDMWVHVFDFH 258 (264)
Q Consensus 242 ~~~~gs~d~~v~vwd~~ 258 (264)
++++=..+..||.+++.
T Consensus 458 lyVaD~~N~rIrki~~~ 474 (496)
T 3kya_A 458 FYVHDQVGHTIRTISME 474 (496)
T ss_dssp EEEEETTTTEEEEEEEC
T ss_pred EEEEeCCCCEEEEEECC
Confidence 77777778888888764
No 301
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.47 E-value=0.0087 Score=48.25 Aligned_cols=222 Identities=15% Similarity=0.158 Sum_probs=104.4
Q ss_pred CCCeEEEEEeCC----CCcEEEeCCCCceEEe--eeCCcCCEEEEEECCCCcEEEEecC----C-----CeEEEEeCCCC
Q 024676 29 PDGFFLVSASKD----SSPMLRNGETGDWIGT--FEGHKGAVWSCCLDANALFSASGSA----D-----FTAKLWDALTG 93 (264)
Q Consensus 29 ~~g~~l~t~s~d----~~v~i~~~~~~~~~~~--~~~H~~~V~~v~~~~~~~~l~s~s~----D-----~~v~iwd~~~~ 93 (264)
-++..++.|+.+ ..+.++|..++++... +..-+.. .+++.. ++..++.|+. + ..+.++|..+.
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~ 100 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSG-LAGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTN 100 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTT
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCccccc-ceEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCC
Confidence 355666666632 3577889988876532 1111111 112222 4566666665 2 35777887765
Q ss_pred cEEEEee--cCC-eEEEEEECCCCCEEEEeeCC-----CcEEEeeCCCCCCCCeEecc--CCCCeEEEEEecCCCeEEEE
Q 024676 94 DEKHSFE--HKH-IVRACAFSEDTHLLLTGGFE-----KILRIFDLNRPDAPPREVGN--SSGSIRTVAWLHSDQTILSS 163 (264)
Q Consensus 94 ~~~~~~~--~~~-~v~~~~~~~~~~~l~s~~~d-----~~i~~~d~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~ 163 (264)
.-..... ... .-..+.+ ++++++.|+.+ ..+..||..+.+. ..... ..-.-.+++.. ++.+++.
T Consensus 101 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W--~~~~~~p~~r~~~~~~~~--~~~iyv~ 174 (308)
T 1zgk_A 101 QWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEW--HLVAPMLTRRIGVGVAVL--NRLLYAV 174 (308)
T ss_dssp EEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEE--EECCCCSSCCBSCEEEEE--TTEEEEE
T ss_pred eEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeE--eECCCCCccccceEEEEE--CCEEEEE
Confidence 4211111 110 1111222 56677776643 3467788765432 11111 11111122222 3344444
Q ss_pred eeCC-----CeEEEEECCCCceeEE--ecCCCCEEEEEEcCCCcEEEE-eCC-----CcEEEEECCCceeeeEEecCCCC
Q 024676 164 CTDS-----GGVRLWDARSGKIVQT--LETKSPVTSAEVSRDGRYITT-ADG-----SSVKFWDANHFGLVKGYNMPCNT 230 (264)
Q Consensus 164 ~~~d-----~~v~iwd~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~-~~~-----~~i~iwd~~~~~~~~~~~~~~~~ 230 (264)
++.+ ..+.+||+.+.+-... +.....-.+++.. ++++++. +.+ ..+.+||+.+.+=...-..+...
T Consensus 175 GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r 253 (308)
T 1zgk_A 175 GGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRR 253 (308)
T ss_dssp CCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCC
T ss_pred eCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCc
Confidence 4322 4588999988754321 1111111122222 5555444 332 46889998765322111222211
Q ss_pred c--eeeEcCCCCCEEEEecCC-----CeEEEEEcCcce
Q 024676 231 E--SASLEPKLGNIFIAGGED-----MWVHVFDFHTGE 261 (264)
Q Consensus 231 ~--~~~~~~~~~~~~~~gs~d-----~~v~vwd~~~g~ 261 (264)
. ..... .+++++.||.+ ..+.+||..+.+
T Consensus 254 ~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 254 SALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp BSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred cceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 1 22222 47788888854 457888877653
No 302
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.43 E-value=0.028 Score=44.22 Aligned_cols=200 Identities=11% Similarity=0.157 Sum_probs=123.8
Q ss_pred eeeCCcCCEEEEEECCCCc-EEEEecCCCeEEEEeCCCCcEEEEeecC--CeEEEEEECCCCCEEEEeeCCCcEEEeeCC
Q 024676 56 TFEGHKGAVWSCCLDANAL-FSASGSADFTAKLWDALTGDEKHSFEHK--HIVRACAFSEDTHLLLTGGFEKILRIFDLN 132 (264)
Q Consensus 56 ~~~~H~~~V~~v~~~~~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~ 132 (264)
.+.|=.+.+..+++.|++. +.+....++.|...|.. ++.+..+... .-...+++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 4445556789999998765 44556668888888987 7777776543 356788888888776665456778888775
Q ss_pred CCCCC--CeEe------ccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECC---CCceeEEec--------CCCCEEEE
Q 024676 133 RPDAP--PREV------GNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDAR---SGKIVQTLE--------TKSPVTSA 193 (264)
Q Consensus 133 ~~~~~--~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~---~~~~~~~~~--------~~~~v~~~ 193 (264)
..... .... ...+.....++|.+.+..++++.-.+ ...||.++ ....+.... .-.....+
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~-p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN-PIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS-SEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC-CceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 43321 0111 12344568899999887777765543 34444443 111222221 11346789
Q ss_pred EEcCCC-cEEEEe-CCCcEEEEECCCceeeeEEecCC----------CCceeeEcCCCCCEEEEecCCCeEEEEEcCcc
Q 024676 194 EVSRDG-RYITTA-DGSSVKFWDANHFGLVKGYNMPC----------NTESASLEPKLGNIFIAGGEDMWVHVFDFHTG 260 (264)
Q Consensus 194 ~~s~~~-~~l~~~-~~~~i~iwd~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g 260 (264)
+++|.. ++++.+ .++.+..+|.. ++.+..+.... ++.-+++.++ |.++++ |+-..++.|....+
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~-G~lyIv-sE~n~~y~f~~~~~ 254 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDAS-GNIYIV-SEPNRFYRFTPQSS 254 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTT-CCEEEE-ETTTEEEEEEC---
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCC-CCEEEE-cCCceEEEEEecCC
Confidence 999875 444444 46788888965 44666666542 3455677774 776666 78778888765443
No 303
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.02 E-value=0.091 Score=42.33 Aligned_cols=221 Identities=13% Similarity=0.122 Sum_probs=99.9
Q ss_pred EEEEEeCCCCcEEEeCCCCceEE-eeeCCcCCEEEEEECCCCcEEEEecC----CC-------eEEEEeCCCCcEEEE--
Q 024676 33 FLVSASKDSSPMLRNGETGDWIG-TFEGHKGAVWSCCLDANALFSASGSA----DF-------TAKLWDALTGDEKHS-- 98 (264)
Q Consensus 33 ~l~t~s~d~~v~i~~~~~~~~~~-~~~~H~~~V~~v~~~~~~~~l~s~s~----D~-------~v~iwd~~~~~~~~~-- 98 (264)
.++.|+. .+..||..++++.. .+......-.......++..++.|+. ++ .+..+|..+..=...
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 4445553 37889999988754 22211112222233445666666652 11 166778766532111
Q ss_pred eecCC-eEEEEEECCCCCEEEEeeCC-------CcEEEeeCCCCCCCCeEeccCCCCe--EEEEEecCCCeEEEEeeC--
Q 024676 99 FEHKH-IVRACAFSEDTHLLLTGGFE-------KILRIFDLNRPDAPPREVGNSSGSI--RTVAWLHSDQTILSSCTD-- 166 (264)
Q Consensus 99 ~~~~~-~v~~~~~~~~~~~l~s~~~d-------~~i~~~d~~~~~~~~~~~~~~~~~i--~~~~~~~~~~~~~~~~~~-- 166 (264)
.+... .-..+.+ ++++++.|+.+ ..+.+||..+.+. ........+. .+++. .++..++.++..
T Consensus 96 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W--~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~ 170 (318)
T 2woz_A 96 LPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKW--SEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDD 170 (318)
T ss_dssp BSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEE--EEECCCSSCEESCEEEE-ETTEEEEECCEESS
T ss_pred CCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCE--eECCCCCCcccccEEEE-ECCEEEEEcCCCCC
Confidence 11111 0111222 56677777754 2366778765432 2221111111 11222 233333444331
Q ss_pred ---CCeEEEEECCCCceeEEecCCC--CEEEEEEcCCCcE-EEEeCC-----CcEEEEECCCceeeeEEecCCCCceeeE
Q 024676 167 ---SGGVRLWDARSGKIVQTLETKS--PVTSAEVSRDGRY-ITTADG-----SSVKFWDANHFGLVKGYNMPCNTESASL 235 (264)
Q Consensus 167 ---d~~v~iwd~~~~~~~~~~~~~~--~v~~~~~s~~~~~-l~~~~~-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 235 (264)
-..+.+||+.+.+-...-.... .-.+++.. ++++ +.++.+ ..+.+||+.+.+=...-..+........
T Consensus 171 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 249 (318)
T 2woz_A 171 KKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISL 249 (318)
T ss_dssp SCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEE
T ss_pred CCccceEEEEcCCCCEEEECCCCCCCcccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEE
Confidence 1358999998876433211111 11122232 4554 444422 2477888876532111112211111111
Q ss_pred cCCCCCEEEEecCC--------------CeEEEEEcCcce
Q 024676 236 EPKLGNIFIAGGED--------------MWVHVFDFHTGE 261 (264)
Q Consensus 236 ~~~~~~~~~~gs~d--------------~~v~vwd~~~g~ 261 (264)
..-.+++++.||.+ ..+.+||..+.+
T Consensus 250 ~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 250 VSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp EEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred EEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 11146788888764 357788877643
No 304
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.00 E-value=0.098 Score=42.09 Aligned_cols=218 Identities=11% Similarity=0.055 Sum_probs=100.7
Q ss_pred EEEEEeCCCCcEEEeCCCCceEE-eeeCCcCCEEEEEECCCCcEEEEecC-------CC----eEEEEeCCCCcEEEEee
Q 024676 33 FLVSASKDSSPMLRNGETGDWIG-TFEGHKGAVWSCCLDANALFSASGSA-------DF----TAKLWDALTGDEKHSFE 100 (264)
Q Consensus 33 ~l~t~s~d~~v~i~~~~~~~~~~-~~~~H~~~V~~v~~~~~~~~l~s~s~-------D~----~v~iwd~~~~~~~~~~~ 100 (264)
+++.|+ ..+.+||..++++.. .+..............++..++.|+. .. .+..||..+..=.....
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 344555 468889999988753 22212122222233445666555552 11 26677877654211111
Q ss_pred cCCeE--EEEEECCCCCEEEEeeCC--------CcEEEeeCCCCCCCCeEecc--CCCCeEEEEEecCCCeEEEEeeC-C
Q 024676 101 HKHIV--RACAFSEDTHLLLTGGFE--------KILRIFDLNRPDAPPREVGN--SSGSIRTVAWLHSDQTILSSCTD-S 167 (264)
Q Consensus 101 ~~~~v--~~~~~~~~~~~l~s~~~d--------~~i~~~d~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~-d 167 (264)
...+- ..++. -++++++.|+.+ ..+..||..+.+. ..... ..-.-.+++.. ++ .+++.++. +
T Consensus 85 ~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W--~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~ 159 (315)
T 4asc_A 85 LPSPRCLFGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKW--GESDPLPYVVYGHTVLSH-MD-LVYVIGGKGS 159 (315)
T ss_dssp BSSCEESCEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEE--EECCCCSSCCBSCEEEEE-TT-EEEEECCBCT
T ss_pred CCcchhceeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcE--eECCCCCCcccceeEEEE-CC-EEEEEeCCCC
Confidence 11111 01111 156666777632 4477888765432 22111 11111122222 33 44444433 1
Q ss_pred -----CeEEEEECCCCceeEE--ecCCCCEEEEEEcCCCcE-EEEeCCC-----cEEEEECCCceeeeEEecCCCCc--e
Q 024676 168 -----GGVRLWDARSGKIVQT--LETKSPVTSAEVSRDGRY-ITTADGS-----SVKFWDANHFGLVKGYNMPCNTE--S 232 (264)
Q Consensus 168 -----~~v~iwd~~~~~~~~~--~~~~~~v~~~~~s~~~~~-l~~~~~~-----~i~iwd~~~~~~~~~~~~~~~~~--~ 232 (264)
..+.+||+.+.+-... +.....-.+++.. ++++ +.++.++ .+..||+.+.+=...-..+.... .
T Consensus 160 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~ 238 (315)
T 4asc_A 160 DRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH-DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLS 238 (315)
T ss_dssp TSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCE
T ss_pred CCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE-CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCccccee
Confidence 3588999988753321 1111111122222 4554 4444332 57888987653221111222111 1
Q ss_pred eeEcCCCCCEEEEecCCC--------------eEEEEEcCcc
Q 024676 233 ASLEPKLGNIFIAGGEDM--------------WVHVFDFHTG 260 (264)
Q Consensus 233 ~~~~~~~~~~~~~gs~d~--------------~v~vwd~~~g 260 (264)
.... .+++++.||.++ .+.+||..+.
T Consensus 239 ~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 239 LVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp EEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred EEEE--CCEEEEECCccccCcCCccccccccCcEEEecCCCC
Confidence 2222 467888888643 4678887665
No 305
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.96 E-value=0.19 Score=44.83 Aligned_cols=220 Identities=6% Similarity=-0.142 Sum_probs=122.8
Q ss_pred CCCCcEEEeCCCCc--eEEeeeCCcCCEEEEEECCCCcE-EEEecCCCeEEEEeCCCCcE-EEEeecC-CeEEEEEECCC
Q 024676 39 KDSSPMLRNGETGD--WIGTFEGHKGAVWSCCLDANALF-SASGSADFTAKLWDALTGDE-KHSFEHK-HIVRACAFSED 113 (264)
Q Consensus 39 ~d~~v~i~~~~~~~--~~~~~~~H~~~V~~v~~~~~~~~-l~s~s~D~~v~iwd~~~~~~-~~~~~~~-~~v~~~~~~~~ 113 (264)
..+.|+..++.... ...... .-....+++|++.+.. ..+-...+.|+.++...... ...+... .....+++++.
T Consensus 16 ~~~~I~~i~~~~~~~~~~~~~~-~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~ 94 (619)
T 3s94_A 16 NRRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWL 94 (619)
T ss_dssp CSSBEEEECCC---------CB-CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETT
T ss_pred ccccEEEEeCCCCcceEEEEEc-CCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEec
Confidence 34556777766432 111122 2234678999975544 45656677888888765532 2222222 46789999996
Q ss_pred CCEEEEe-eCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeC-CCeEEEEECCCCceeEEe-cCCCCE
Q 024676 114 THLLLTG-GFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTD-SGGVRLWDARSGKIVQTL-ETKSPV 190 (264)
Q Consensus 114 ~~~l~s~-~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-d~~v~iwd~~~~~~~~~~-~~~~~v 190 (264)
++.|+.+ ...+.|.+.+++.... .......-.....+++.|.++.++.+-.. ...|...++......... ..-...
T Consensus 95 ~~~ly~~d~~~~~I~v~~~dG~~~-~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P 173 (619)
T 3s94_A 95 GEKLYWTDSETNRIEVSNLDGSLR-KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWP 173 (619)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSE
T ss_pred CCEEEEEeCCCCEEEEEECCCCCE-EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCC
Confidence 6555554 4568899999865332 12221222345567777777777766432 356777777644332222 233457
Q ss_pred EEEEEcCCCcE-EEEe-CCCcEEEEECCCceeeeEEe-cCCCCceeeEcCCCCCEEEEecCCCeEEEEEcCccee
Q 024676 191 TSAEVSRDGRY-ITTA-DGSSVKFWDANHFGLVKGYN-MPCNTESASLEPKLGNIFIAGGEDMWVHVFDFHTGEQ 262 (264)
Q Consensus 191 ~~~~~s~~~~~-l~~~-~~~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~~ 262 (264)
+.+++++++.. +.+- ....|...|+.......... ....+..++++. +.++++-..++.|...|..+|+.
T Consensus 174 ~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~--~~ly~td~~~~~V~~~d~~tg~~ 246 (619)
T 3s94_A 174 NGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE--DILYWTDWSTHSILACNKYTGEG 246 (619)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESS--SEEEEECTTTCSEEEEESSSCCC
T ss_pred cEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeC--CEEEEecCCCCEEEEEECCCCcc
Confidence 89999987544 3443 34678888886543221111 112334455543 47777877888899999877753
No 306
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.55 E-value=0.16 Score=40.33 Aligned_cols=181 Identities=16% Similarity=0.141 Sum_probs=87.0
Q ss_pred CCeEEEEEeCC-----CCcEEEeCCCCc---eEEeee--CCcCCEEEEEECCCCcEEEEecCC-----CeEEEEeCCCCc
Q 024676 30 DGFFLVSASKD-----SSPMLRNGETGD---WIGTFE--GHKGAVWSCCLDANALFSASGSAD-----FTAKLWDALTGD 94 (264)
Q Consensus 30 ~g~~l~t~s~d-----~~v~i~~~~~~~---~~~~~~--~H~~~V~~v~~~~~~~~l~s~s~D-----~~v~iwd~~~~~ 94 (264)
+++.++.|+.+ ..+.++|..+++ +...-. .....-.++.+ +++.++.|+.+ ..+.++|..+..
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 45666777655 357788988887 643221 11111111222 56666666654 357788887764
Q ss_pred EEEE--eecCCeEEEEEECCCCCEEEEeeCC-----CcEEEeeCCCCCCCCeEeccC--CCCeEEEEEecCCCeEEEEee
Q 024676 95 EKHS--FEHKHIVRACAFSEDTHLLLTGGFE-----KILRIFDLNRPDAPPREVGNS--SGSIRTVAWLHSDQTILSSCT 165 (264)
Q Consensus 95 ~~~~--~~~~~~v~~~~~~~~~~~l~s~~~d-----~~i~~~d~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~ 165 (264)
=... ......-..++. .++++++.|+.+ ..+..||+.+.+. ...... ...-..++.. ++.+++.++
T Consensus 140 W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W--~~~~~~p~~r~~~~~~~~--~~~i~v~GG 214 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVV-ASGVIYCLGGYDGLNILNSVEKYDPHTGHW--TNVTPMATKRSGAGVALL--NDHIYVVGG 214 (301)
T ss_dssp EEEEEECSSCCBSCEEEE-ETTEEEEECCBCSSCBCCCEEEEETTTTEE--EEECCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred EEECCCCCCCcccceEEE-ECCEEEEECCCCCCcccceEEEEeCCCCcE--EeCCCCCcccccceEEEE--CCEEEEEeC
Confidence 2221 111111111111 256777777654 4477888765432 222111 1111122222 344544444
Q ss_pred CC-----CeEEEEECCCCceeEEecCC--CCEEEEEEcCCCcEEEE-eCC-----CcEEEEECCCc
Q 024676 166 DS-----GGVRLWDARSGKIVQTLETK--SPVTSAEVSRDGRYITT-ADG-----SSVKFWDANHF 218 (264)
Q Consensus 166 ~d-----~~v~iwd~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~-~~~-----~~i~iwd~~~~ 218 (264)
.+ ..+.+||+++.+-...-... ..-.++... ++++++. +.+ ..+.+||.++.
T Consensus 215 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 215 FDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL-RGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp BCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred CCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE-CCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 32 46899999987643322111 111122222 5555444 332 34677887654
No 307
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.54 E-value=0.028 Score=46.12 Aligned_cols=111 Identities=11% Similarity=0.020 Sum_probs=68.9
Q ss_pred CeEEEEEeCCCCcEEEeCCCCceEEeeeCC-cCCEEEEEEC---CCCcEEEEe-cCCCeEEEEeCCCCcEEEEeec----
Q 024676 31 GFFLVSASKDSSPMLRNGETGDWIGTFEGH-KGAVWSCCLD---ANALFSASG-SADFTAKLWDALTGDEKHSFEH---- 101 (264)
Q Consensus 31 g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H-~~~V~~v~~~---~~~~~l~s~-s~D~~v~iwd~~~~~~~~~~~~---- 101 (264)
+.+++.++.||.+.-.|..+|+.+=+++.- ..++....-. .++..++.. ..||.+..++..+|..+..+..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 357889999999999999999765444322 1233221100 133344443 6899999999988865554432
Q ss_pred -CCeEEE----EEEC----CCCCEEEEeeCCCcEEEeeCCCCCCCCeEe
Q 024676 102 -KHIVRA----CAFS----EDTHLLLTGGFEKILRIFDLNRPDAPPREV 141 (264)
Q Consensus 102 -~~~v~~----~~~~----~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~ 141 (264)
..++.. +... ..+..+++|+.++.+...|+++++......
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 223321 0000 145678899999999999999888665543
No 308
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.32 E-value=0.14 Score=41.95 Aligned_cols=53 Identities=9% Similarity=-0.069 Sum_probs=26.3
Q ss_pred cEEEEECCCc--eeeeEEecCCCCceeeEcCCCCCEEEEecCCC------eEEEEEcCcceee
Q 024676 209 SVKFWDANHF--GLVKGYNMPCNTESASLEPKLGNIFIAGGEDM------WVHVFDFHTGEQI 263 (264)
Q Consensus 209 ~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d~------~v~vwd~~~g~~i 263 (264)
.+.+||+.+. +.+.....+-..-.... . .+++++.||.++ .|.++++++++.+
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~-~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~ 346 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSLP-W-NNSLLIIGGETAGGKAVTDSVLITVKDNKVT 346 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEEE-E-TTEEEEEEEECGGGCEEEEEEEEEC-CCSCE
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeEE-e-CCEEEEEeeeCCCCCEeeeEEEEEEcCcEeE
Confidence 4778888754 33332222111111222 2 478888888653 3555687776643
No 309
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.31 E-value=0.34 Score=39.47 Aligned_cols=151 Identities=9% Similarity=0.036 Sum_probs=91.1
Q ss_pred EEEEECC-CCcEEEEecCCCeEEEEeCCCCcEEEE-eec-------CCeEEEEEE---CCCCCEEEEee-----------
Q 024676 65 WSCCLDA-NALFSASGSADFTAKLWDALTGDEKHS-FEH-------KHIVRACAF---SEDTHLLLTGG----------- 121 (264)
Q Consensus 65 ~~v~~~~-~~~~l~s~s~D~~v~iwd~~~~~~~~~-~~~-------~~~v~~~~~---~~~~~~l~s~~----------- 121 (264)
.+.+|++ ++.+.++.-..++|..||...+..... ++. ...+..+.+ +|+++++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 3567876 455556666899999999875543322 222 113578999 68877766432
Q ss_pred --CCCcEEEeeCC---CCCCCCeEecc------------CCCCeEEEEEecCCCeEEEEeeCC-CeEEEEECCCCceeEE
Q 024676 122 --FEKILRIFDLN---RPDAPPREVGN------------SSGSIRTVAWLHSDQTILSSCTDS-GGVRLWDARSGKIVQT 183 (264)
Q Consensus 122 --~d~~i~~~d~~---~~~~~~~~~~~------------~~~~i~~~~~~~~~~~~~~~~~~d-~~v~iwd~~~~~~~~~ 183 (264)
.++.+..||+. +++........ .......++.-+.+. ..++++.. +.|...|..... +..
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~~~~I~rV~pdG~~-~~~ 173 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALGMPAIARVSADGKT-VST 173 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEESSCEEEEECTTSCC-EEE
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC-EEEeCCCCCCeEEEEeCCCCE-Eee
Confidence 15778899998 66554333211 112345566555544 44445554 667777765432 222
Q ss_pred e--cC-----CCCEEEEEEcCCCcEEEEe-CCCcEEEEECCC
Q 024676 184 L--ET-----KSPVTSAEVSRDGRYITTA-DGSSVKFWDANH 217 (264)
Q Consensus 184 ~--~~-----~~~v~~~~~s~~~~~l~~~-~~~~i~iwd~~~ 217 (264)
+ .. ....+.++++|+|+.|+.. .++.+.-+|+.+
T Consensus 174 ~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 174 FAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred eeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 2 11 1125689999999776554 367888889874
No 310
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.98 E-value=1.2 Score=42.77 Aligned_cols=237 Identities=10% Similarity=0.028 Sum_probs=129.8
Q ss_pred CCCeeeeEeccCCC---CCeEEEEEeC-CCCcEEEeCCCCceEEe--eeCCcCCEEEEEEC--CCCcEEEEecCCCeEEE
Q 024676 16 SRPVVDLFYSPITP---DGFFLVSASK-DSSPMLRNGETGDWIGT--FEGHKGAVWSCCLD--ANALFSASGSADFTAKL 87 (264)
Q Consensus 16 ~~~v~~~~~~~~~~---~g~~l~t~s~-d~~v~i~~~~~~~~~~~--~~~H~~~V~~v~~~--~~~~~l~s~s~D~~v~i 87 (264)
...|.|+++.|..+ .+++++.|.. |++++|+++.+.+.+.. +.+ .....++.+. ....++..|-.||.+.-
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~-~~~p~si~l~~~~~~~~L~igl~dG~l~~ 631 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG-EIIPRSILMTTFESSHYLLCALGDGALFY 631 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCS-SCCEEEEEEEEETTEEEEEEEETTSEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCC-CCCCcEEEEEEeCCCcEEEEEeCCCeEEE
Confidence 45799999887432 2478999997 99999999987765432 322 1233444332 23467788888998755
Q ss_pred Ee--CCCCcEEEE---eecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEE-EEecCC--Ce
Q 024676 88 WD--ALTGDEKHS---FEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTV-AWLHSD--QT 159 (264)
Q Consensus 88 wd--~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~-~~~~~~--~~ 159 (264)
+. ..++..... +--..++....+...+..-+-+..++..-+|--+ +.. ....-.-..+..+ .|.... +.
T Consensus 632 ~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l--~~s~l~~~~v~~~~~F~se~~~~g 708 (1158)
T 3ei3_A 632 FGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKL--VFSNVNLKEVNYMCPLNSDGYPDS 708 (1158)
T ss_dssp EEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSE--EEEEBSSSCCCEEEEECCSSSTTE
T ss_pred EEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcC-Cce--EEeccChHHhceEeccCcccCCCc
Confidence 54 444543221 2233455544444433333333334555555432 211 1111111223333 333221 22
Q ss_pred EEEEeeCCCeEEEEECCCCc--eeEEecCCCCEEEEEEcCCCcEEE--EeC-----------------------------
Q 024676 160 ILSSCTDSGGVRLWDARSGK--IVQTLETKSPVTSAEVSRDGRYIT--TAD----------------------------- 206 (264)
Q Consensus 160 ~~~~~~~d~~v~iwd~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~--~~~----------------------------- 206 (264)
++. .+ ++.++|.-+.+.+ .++.+.....+..++++|+.+.++ ++.
T Consensus 709 ~v~-~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1158)
T 3ei3_A 709 LAL-AN-NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSS 786 (1158)
T ss_dssp EEE-EC-SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCC
T ss_pred EEE-Ec-CCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhccccc
Confidence 333 23 4679998876543 234555666788888888765322 110
Q ss_pred -------------------CCcEEEEECCCceeeeEEecCCCCc--ee---eEcCCCCCEEEEec----------CCCeE
Q 024676 207 -------------------GSSVKFWDANHFGLVKGYNMPCNTE--SA---SLEPKLGNIFIAGG----------EDMWV 252 (264)
Q Consensus 207 -------------------~~~i~iwd~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~gs----------~d~~v 252 (264)
...|++.|..+++.+..+.+..+.. +. .+..+...+|+.|. .-|.|
T Consensus 787 ~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri 866 (1158)
T 3ei3_A 787 KLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRI 866 (1158)
T ss_dssp CCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEE
T ss_pred ccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEE
Confidence 0237788888888888887754432 22 12222246777765 35789
Q ss_pred EEEEcC
Q 024676 253 HVFDFH 258 (264)
Q Consensus 253 ~vwd~~ 258 (264)
++|++.
T Consensus 867 ~vf~v~ 872 (1158)
T 3ei3_A 867 VVFQYS 872 (1158)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999875
No 311
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.95 E-value=0.56 Score=38.68 Aligned_cols=135 Identities=16% Similarity=0.190 Sum_probs=75.1
Q ss_pred CCCcEEEeeCCCCCCCCeEec--c-----CCCCeEEEEEec--CCC-eEEEEeeC--CCeEEEEECCCC--ce--eEEec
Q 024676 122 FEKILRIFDLNRPDAPPREVG--N-----SSGSIRTVAWLH--SDQ-TILSSCTD--SGGVRLWDARSG--KI--VQTLE 185 (264)
Q Consensus 122 ~d~~i~~~d~~~~~~~~~~~~--~-----~~~~i~~~~~~~--~~~-~~~~~~~~--d~~v~iwd~~~~--~~--~~~~~ 185 (264)
.+|.|.++|.++.......+. . .......+.+.. ++. .+++.... +.+|.+|++..+ .. +..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 678899999874322222211 1 123556666654 233 34444333 457888776543 22 22333
Q ss_pred C--CCCEEEEEEcCCCcEEEEeC----C--------------CcEEEEECCCceeeeEEecCCCCceeeEcCCCCCEEEE
Q 024676 186 T--KSPVTSAEVSRDGRYITTAD----G--------------SSVKFWDANHFGLVKGYNMPCNTESASLEPKLGNIFIA 245 (264)
Q Consensus 186 ~--~~~v~~~~~s~~~~~l~~~~----~--------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (264)
. -...+.+.+.++|.+.++.. + +.+..+|.. +.......-..++-++++|+...++++
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l~~pNGia~spDg~~lYva 238 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGFDFANGINISPDGKYVYIA 238 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEESSEEEEEECTTSSEEEEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeecCCcccCcceECCCCCEEEEE
Confidence 3 24589999999999877653 1 234444442 211111111234567888864456667
Q ss_pred ecCCCeEEEEEcC
Q 024676 246 GGEDMWVHVFDFH 258 (264)
Q Consensus 246 gs~d~~v~vwd~~ 258 (264)
-+..+.|+.|+++
T Consensus 239 dt~~~~I~~~~~~ 251 (355)
T 3sre_A 239 ELLAHKIHVYEKH 251 (355)
T ss_dssp EGGGTEEEEEEEC
T ss_pred eCCCCeEEEEEEC
Confidence 7778899999975
No 312
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.86 E-value=0.28 Score=39.06 Aligned_cols=181 Identities=10% Similarity=0.135 Sum_probs=85.9
Q ss_pred CCeEEEEEeCC----CCcEEEeCCCCceEEe--eeCCcCCEEEEEECCCCcEEEEecCC------CeEEEEeCCCCcEEE
Q 024676 30 DGFFLVSASKD----SSPMLRNGETGDWIGT--FEGHKGAVWSCCLDANALFSASGSAD------FTAKLWDALTGDEKH 97 (264)
Q Consensus 30 ~g~~l~t~s~d----~~v~i~~~~~~~~~~~--~~~H~~~V~~v~~~~~~~~l~s~s~D------~~v~iwd~~~~~~~~ 97 (264)
++..++.|+.+ ..+.++|..++++... +......-.++.+ +++.++.|+.+ ..+.+||..+..=..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 45666777655 4567789988876432 2111111111222 56666667655 468888887764222
Q ss_pred Eee--cCCeEEEEEECCCCCEEEEeeC---------CCcEEEeeCCCCCCCCeEeccC--CCCeEEEEEecCCCeEEEEe
Q 024676 98 SFE--HKHIVRACAFSEDTHLLLTGGF---------EKILRIFDLNRPDAPPREVGNS--SGSIRTVAWLHSDQTILSSC 164 (264)
Q Consensus 98 ~~~--~~~~v~~~~~~~~~~~l~s~~~---------d~~i~~~d~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~ 164 (264)
... ....-..++ ..++++++.|+. -..+..||+.+.+. ...... .-.-..++.. ++..+++++
T Consensus 133 ~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W--~~~~~~p~~r~~~~~~~~-~~~i~v~GG 208 (306)
T 3ii7_A 133 KPSMLTQRCSHGMV-EANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETW--TELCPMIEARKNHGLVFV-KDKIFAVGG 208 (306)
T ss_dssp ECCCSSCCBSCEEE-EETTEEEEECCEESCTTTCEECCCEEEEETTTTEE--EEECCCSSCCBSCEEEEE-TTEEEEECC
T ss_pred CCCCcCCcceeEEE-EECCEEEEECCCCCCCCcccccceEEEeCCCCCeE--EECCCccchhhcceEEEE-CCEEEEEeC
Confidence 111 111111111 125666666653 34477888865432 222111 1111122222 333334433
Q ss_pred eCC----CeEEEEECCCCceeEE--ecCC-CCEEEEEEcCCCcEE-EEeCC-----CcEEEEECCCc
Q 024676 165 TDS----GGVRLWDARSGKIVQT--LETK-SPVTSAEVSRDGRYI-TTADG-----SSVKFWDANHF 218 (264)
Q Consensus 165 ~~d----~~v~iwd~~~~~~~~~--~~~~-~~v~~~~~s~~~~~l-~~~~~-----~~i~iwd~~~~ 218 (264)
.+. ..+.+||+.+.+-... +... .....+.+ +++++ .++.+ ..+..||+.+.
T Consensus 209 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 209 QNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp EETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred CCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 221 3588999988753321 1111 11222222 55554 44432 35788898764
No 313
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.83 E-value=0.62 Score=38.23 Aligned_cols=98 Identities=18% Similarity=0.150 Sum_probs=57.3
Q ss_pred CeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCce--EEeee---CCcCCEEEEEECCC----CcEEEEecCC-----C
Q 024676 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDW--IGTFE---GHKGAVWSCCLDAN----ALFSASGSAD-----F 83 (264)
Q Consensus 18 ~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~--~~~~~---~H~~~V~~v~~~~~----~~~l~s~s~D-----~ 83 (264)
.-.+|+|.| +|++++ +..++.|++++ +++. +..+. .-......++++|+ +.+.++-..+ .
T Consensus 32 ~P~~ia~~p---dG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 32 VPWALAFLP---DGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp CEEEEEECT---TSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CceEEEEcC---CCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 345889986 888554 46678888887 4432 22221 12345688999998 4443443322 5
Q ss_pred eEEEEeCCCCc-----EEEE-eec----CCeEEEEEECCCCCEEEEee
Q 024676 84 TAKLWDALTGD-----EKHS-FEH----KHIVRACAFSEDTHLLLTGG 121 (264)
Q Consensus 84 ~v~iwd~~~~~-----~~~~-~~~----~~~v~~~~~~~~~~~l~s~~ 121 (264)
.|..++...+. .+.. ++. .+....+.+.|++.+.++.+
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 67677765431 1111 221 12346789999998777643
No 314
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.75 E-value=0.38 Score=38.18 Aligned_cols=182 Identities=12% Similarity=0.199 Sum_probs=84.4
Q ss_pred CCeEEEEEeCCC-----CcEEEeCCCCceEEe--eeCCcCCEEEEEECCCCcEEEEecCCC-----eEEEEeCCCCcEEE
Q 024676 30 DGFFLVSASKDS-----SPMLRNGETGDWIGT--FEGHKGAVWSCCLDANALFSASGSADF-----TAKLWDALTGDEKH 97 (264)
Q Consensus 30 ~g~~l~t~s~d~-----~v~i~~~~~~~~~~~--~~~H~~~V~~v~~~~~~~~l~s~s~D~-----~v~iwd~~~~~~~~ 97 (264)
++..++.|+.++ .+.++|..++++... +...+..-.++.+ ++...+.|+.++ .+.+||..+..=..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 456666666543 467788888876432 2111111111222 455656665543 56778877654222
Q ss_pred Eee--cCCeEEEEEECCCCCEEEEeeCC-------CcEEEeeCCCCCCCCeEecc--CCCCeEEEEEecCCCeEEEEeeC
Q 024676 98 SFE--HKHIVRACAFSEDTHLLLTGGFE-------KILRIFDLNRPDAPPREVGN--SSGSIRTVAWLHSDQTILSSCTD 166 (264)
Q Consensus 98 ~~~--~~~~v~~~~~~~~~~~l~s~~~d-------~~i~~~d~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~ 166 (264)
... ....-..++. .++++++.|+.+ ..+..||+.+.+. ..... ....-.+++.. ++.+++.++.
T Consensus 139 ~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W--~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 213 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEW--TYIAEMSTRRSGAGVGVL--NNLLYAVGGH 213 (302)
T ss_dssp ECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEE--EEECCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred cCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcE--EECCCCccccccccEEEE--CCEEEEECCC
Confidence 111 1111111111 256666666542 3477888765432 22211 11111122222 3345444443
Q ss_pred C-----CeEEEEECCCCceeEEecCC--CCEEEEEEcCCCcEEE-EeCC-----CcEEEEECCCce
Q 024676 167 S-----GGVRLWDARSGKIVQTLETK--SPVTSAEVSRDGRYIT-TADG-----SSVKFWDANHFG 219 (264)
Q Consensus 167 d-----~~v~iwd~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~-~~~~-----~~i~iwd~~~~~ 219 (264)
+ ..+.+||+++.+-...-... ..-..++.. ++++++ ++.+ ..+.+||+.+.+
T Consensus 214 ~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 214 DGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV-NGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp SSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE-CCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 2 46889999887643321111 111122222 555544 4432 247888887653
No 315
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.74 E-value=0.68 Score=37.99 Aligned_cols=138 Identities=7% Similarity=0.019 Sum_probs=75.1
Q ss_pred CEEEEEECCCCcEEEEecCCCeEEEEeCCCCcE--EEEee----cCCeEEEEEECCC---CCEEEEeeC-C-----CcEE
Q 024676 63 AVWSCCLDANALFSASGSADFTAKLWDALTGDE--KHSFE----HKHIVRACAFSED---THLLLTGGF-E-----KILR 127 (264)
Q Consensus 63 ~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~--~~~~~----~~~~v~~~~~~~~---~~~l~s~~~-d-----~~i~ 127 (264)
.-+.++|.|++.++++ ..++.|++++ ++.. +..+. .......++++|+ +..|+.+.. . +.|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 4468999999987665 4568999998 4432 12221 1345789999998 555555433 2 5566
Q ss_pred EeeCCCCCC-----CCeEec---cCCCCeEEEEEecCCCeEEEEeeC-------------CCeEEEEECCC---------
Q 024676 128 IFDLNRPDA-----PPREVG---NSSGSIRTVAWLHSDQTILSSCTD-------------SGGVRLWDARS--------- 177 (264)
Q Consensus 128 ~~d~~~~~~-----~~~~~~---~~~~~i~~~~~~~~~~~~~~~~~~-------------d~~v~iwd~~~--------- 177 (264)
.++...... ...... ........+++.+++ .+.++.++ .+.|.-+|...
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~ 187 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG-MLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFL 187 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS-CEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTT
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC-CEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCccc
Confidence 677653211 111111 001123467777766 44444322 14565566543
Q ss_pred -----CceeEEecCCCCEEEEEEcC-CCcEEEEe
Q 024676 178 -----GKIVQTLETKSPVTSAEVSR-DGRYITTA 205 (264)
Q Consensus 178 -----~~~~~~~~~~~~v~~~~~s~-~~~~l~~~ 205 (264)
...+..... .....++++| ++.++++-
T Consensus 188 ~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d 220 (352)
T 2ism_A 188 GRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSE 220 (352)
T ss_dssp TCTTSCTTEEEECC-SEECCCEECTTTCCEEEEE
T ss_pred CCCCCCccEEEEcC-CCcccEEEECCCCCEEEEE
Confidence 111222222 3456788999 67776654
No 316
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.62 E-value=0.87 Score=38.46 Aligned_cols=133 Identities=11% Similarity=0.114 Sum_probs=81.1
Q ss_pred CCCcEEEeCCCCceEEeeeCC----cCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCc------------EEEEee---
Q 024676 40 DSSPMLRNGETGDWIGTFEGH----KGAVWSCCLDANALFSASGSADFTAKLWDALTGD------------EKHSFE--- 100 (264)
Q Consensus 40 d~~v~i~~~~~~~~~~~~~~H----~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~------------~~~~~~--- 100 (264)
++.+|+-++......+.+.-- -..|..+..+|+|.++|-.+ ++.|.|-.+..+. ..+.+.
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~ 118 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDE 118 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGG
T ss_pred CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCC
Confidence 456777676644333333321 22567799999999987664 5678887765221 122333
Q ss_pred ----cCCeEEEEEECCC---CCEEEEeeCCCcEEEeeCCCCCCCCeEec---------cCCCCeEEEEEecCCCeEEE-E
Q 024676 101 ----HKHIVRACAFSED---THLLLTGGFEKILRIFDLNRPDAPPREVG---------NSSGSIRTVAWLHSDQTILS-S 163 (264)
Q Consensus 101 ----~~~~v~~~~~~~~---~~~l~s~~~d~~i~~~d~~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~~~~-~ 163 (264)
...+|..+.|||- +..|++-..|++||+||+.........+. .....+.+++|.+++-++.+ +
T Consensus 119 ~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~ 198 (452)
T 3pbp_A 119 EEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLN 198 (452)
T ss_dssp CC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEE
T ss_pred cccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEe
Confidence 2457999999994 56888899999999999976332222111 11145677787764444333 3
Q ss_pred eeCCCeEEEE
Q 024676 164 CTDSGGVRLW 173 (264)
Q Consensus 164 ~~~d~~v~iw 173 (264)
.++.|-|.-.
T Consensus 199 ~t~~GDIYAl 208 (452)
T 3pbp_A 199 TTEGGDIFAF 208 (452)
T ss_dssp CTTSCEEEEE
T ss_pred cCCCCCEEEE
Confidence 3355666543
No 317
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.37 E-value=0.3 Score=39.01 Aligned_cols=181 Identities=15% Similarity=0.193 Sum_probs=84.6
Q ss_pred CCeEEEEEeC----C-----CCcEEEeCCCCceEEe--eeCCcCCEEEEEECCCCcEEEEecCC-----CeEEEEeCCCC
Q 024676 30 DGFFLVSASK----D-----SSPMLRNGETGDWIGT--FEGHKGAVWSCCLDANALFSASGSAD-----FTAKLWDALTG 93 (264)
Q Consensus 30 ~g~~l~t~s~----d-----~~v~i~~~~~~~~~~~--~~~H~~~V~~v~~~~~~~~l~s~s~D-----~~v~iwd~~~~ 93 (264)
+++.++.|+. + ..+.++|..++++... +...+..-.++.+ +++.++.|+.+ ..+.+||..+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 4556666665 2 3577889888876432 2111111112222 55666666543 35778887765
Q ss_pred cEEEE--eecCC-eEEEEEECCCCCEEEEeeCC-----CcEEEeeCCCCCCCCeEecc--CCCCeEEEEEecCCCeEEEE
Q 024676 94 DEKHS--FEHKH-IVRACAFSEDTHLLLTGGFE-----KILRIFDLNRPDAPPREVGN--SSGSIRTVAWLHSDQTILSS 163 (264)
Q Consensus 94 ~~~~~--~~~~~-~v~~~~~~~~~~~l~s~~~d-----~~i~~~d~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~ 163 (264)
.=... .+... .-..+.+ ++++++.|+.+ ..+..||+.+.+. ..... ....-.+++.. ++.+++.
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W--~~~~~~p~~r~~~~~~~~--~~~iyv~ 221 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEW--RMITAMNTIRSGAGVCVL--HNCIYAA 221 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEE--EECCCCSSCCBSCEEEEE--TTEEEEE
T ss_pred eEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeE--eeCCCCCCccccceEEEE--CCEEEEE
Confidence 32111 11111 1111222 56677777654 4477888765432 11111 11111122222 3345444
Q ss_pred eeCC-----CeEEEEECCCCceeEE--ecCCCCEEEEEEcCCCcEEEE-eCC-----CcEEEEECCCce
Q 024676 164 CTDS-----GGVRLWDARSGKIVQT--LETKSPVTSAEVSRDGRYITT-ADG-----SSVKFWDANHFG 219 (264)
Q Consensus 164 ~~~d-----~~v~iwd~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~-~~~-----~~i~iwd~~~~~ 219 (264)
++.+ ..+.+||+++.+-... +.....-.++... ++++++. +.+ ..+.+||+.+.+
T Consensus 222 GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 222 GGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH-QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp CCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred eCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE-CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 4332 4689999988764321 1111111122222 4555444 322 357788887653
No 318
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.24 E-value=1 Score=36.77 Aligned_cols=211 Identities=11% Similarity=0.117 Sum_probs=119.3
Q ss_pred CcEEEeCCCCce--EEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEE
Q 024676 42 SPMLRNGETGDW--IGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLT 119 (264)
Q Consensus 42 ~v~i~~~~~~~~--~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 119 (264)
++.|.|+..+.. .+.+.+- +.-.+|..+.+|-=+ ..+++|+|+++...+..+....+|..-.|-....+-+.
T Consensus 50 ~VvIiDl~n~~~~~Rrpi~Ad-----sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lV 123 (365)
T 2xzh_A 50 QVVIIDMNDPSNPIRRPISAD-----SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALV 123 (365)
T ss_dssp EEEEEETTSTTSCEEEECCCS-----EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSSSEEEEE
T ss_pred EEEEEECCCCCCccccccccc-----eeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCCCeEEEE
Confidence 566677766432 2233321 122467666554333 57899999999999999888889999999776655444
Q ss_pred eeCCCcEEEeeCCCCCCCCeEeccC----CCCeEEEEEecCCCeEEEEee------CCCeEEEEECCCCceeEEecCCCC
Q 024676 120 GGFEKILRIFDLNRPDAPPREVGNS----SGSIRTVAWLHSDQTILSSCT------DSGGVRLWDARSGKIVQTLETKSP 189 (264)
Q Consensus 120 ~~~d~~i~~~d~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~------~d~~v~iwd~~~~~~~~~~~~~~~ 189 (264)
+ +..+.-|+++....+...+..+ ...+....-.++..++++.|- -.|.+.+|..+.+. .+.++++..
T Consensus 124 T--~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa 200 (365)
T 2xzh_A 124 T--DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAA 200 (365)
T ss_dssp E--SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEE
T ss_pred c--CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-cceeeeeee
Confidence 3 3678889987543332222211 234555555666677655443 12668888887554 344555432
Q ss_pred EEEEEEcCCC-----cEEEEe----CCCcEEEEECCCc---ee-----eeEEecCC-----CCceeeEcCCCCCEEEEec
Q 024676 190 VTSAEVSRDG-----RYITTA----DGSSVKFWDANHF---GL-----VKGYNMPC-----NTESASLEPKLGNIFIAGG 247 (264)
Q Consensus 190 v~~~~~s~~~-----~~l~~~----~~~~i~iwd~~~~---~~-----~~~~~~~~-----~~~~~~~~~~~~~~~~~gs 247 (264)
. ...+-.+| ++++.+ .++.++|-++... .. ...+.++. -+.....++++| .+..-.
T Consensus 201 ~-F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kyg-viyviT 278 (365)
T 2xzh_A 201 S-FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLIT 278 (365)
T ss_dssp E-EEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTT-EEEEEE
T ss_pred e-eEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCC-EEEEEe
Confidence 2 22232222 233322 2357888887432 11 11111211 123334455444 444555
Q ss_pred CCCeEEEEEcCcceee
Q 024676 248 EDMWVHVFDFHTGEQI 263 (264)
Q Consensus 248 ~d~~v~vwd~~~g~~i 263 (264)
.-|.+++||+.||..|
T Consensus 279 K~G~ihlyDleTgt~i 294 (365)
T 2xzh_A 279 KYGYIHLYDLETGTCI 294 (365)
T ss_dssp TTSEEEEEETTTCCEE
T ss_pred CCcEEEEEEcccCcEE
Confidence 6799999999998754
No 319
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.14 E-value=0.07 Score=43.77 Aligned_cols=104 Identities=15% Similarity=0.202 Sum_probs=64.7
Q ss_pred EEEEeeCCCeEEEEECCCCceeEEecCC--CCEEEEEE--cC-CCcEEEE--eCCCcEEEEECCCceeeeEEecCCCCc-
Q 024676 160 ILSSCTDSGGVRLWDARSGKIVQTLETK--SPVTSAEV--SR-DGRYITT--ADGSSVKFWDANHFGLVKGYNMPCNTE- 231 (264)
Q Consensus 160 ~~~~~~~d~~v~iwd~~~~~~~~~~~~~--~~v~~~~~--s~-~~~~l~~--~~~~~i~iwd~~~~~~~~~~~~~~~~~- 231 (264)
++..++.||.|.-+|.++|+.+..++.. .++....- .+ ++..++. ..++.+..+|..++...-.+..+....
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~ 91 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVST 91 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceec
Confidence 4455677899999999999999888754 33322110 01 2334433 357888888887775443333321110
Q ss_pred -eeeEc-------C---CCCCEEEEecCCCeEEEEEcCcceee
Q 024676 232 -SASLE-------P---KLGNIFIAGGEDMWVHVFDFHTGEQI 263 (264)
Q Consensus 232 -~~~~~-------~---~~~~~~~~gs~d~~v~vwd~~~g~~i 263 (264)
..... + ..+..+.+|+.++.++-.|+.+|+++
T Consensus 92 SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~ 134 (339)
T 2be1_A 92 SPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEII 134 (339)
T ss_dssp CSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEE
T ss_pred cccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEE
Confidence 11110 0 02567889999999999999999875
No 320
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.04 E-value=0.87 Score=38.48 Aligned_cols=93 Identities=12% Similarity=0.168 Sum_probs=65.7
Q ss_pred CCeEEEEECCCCceeEEecCC-----CCEEEEEEcCCCcEEEEeCCCcEEEEECCCce------------eeeEEecC--
Q 024676 167 SGGVRLWDARSGKIVQTLETK-----SPVTSAEVSRDGRYITTADGSSVKFWDANHFG------------LVKGYNMP-- 227 (264)
Q Consensus 167 d~~v~iwd~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~------------~~~~~~~~-- 227 (264)
++.||.-++..+...+.+... ..+..+..+|+|.+++...+..|.|-.+.... .++.|+..
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~ 119 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEE 119 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGC
T ss_pred CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCc
Confidence 378998888754444444332 25778999999999998888899998886211 13456653
Q ss_pred -----CCCceeeEcCCC--CCEEEEecCCCeEEEEEcCc
Q 024676 228 -----CNTESASLEPKL--GNIFIAGGEDMWVHVFDFHT 259 (264)
Q Consensus 228 -----~~~~~~~~~~~~--~~~~~~gs~d~~v~vwd~~~ 259 (264)
.......|+|-. +..|++=-+|+.||+||+..
T Consensus 120 ~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 120 EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 224456677643 45888888899999999875
No 321
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.91 E-value=1.5 Score=37.19 Aligned_cols=212 Identities=10% Similarity=0.118 Sum_probs=117.5
Q ss_pred CcEEEeCCCCce--EEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEE
Q 024676 42 SPMLRNGETGDW--IGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLT 119 (264)
Q Consensus 42 ~v~i~~~~~~~~--~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 119 (264)
++-|.|+..+.. .+.+.+- +.-.+|..+.+|-=+ ..+++|+|+++...+..+....+|..-.|-....+-+.
T Consensus 49 ~vvIiDl~~~~~~~rrpi~Ad-----sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~lV 122 (494)
T 1bpo_A 49 QVVIIDMNDPSNPIRRPISAD-----SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALV 122 (494)
T ss_dssp EEEEEETTSTTSCEEEECCCS-----EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEEEE
T ss_pred eEEEEECCCCCcceecccccc-----eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCCCeEEEE
Confidence 566667766432 2233321 122466665544322 67999999999998888887778888778665544333
Q ss_pred eeCCCcEEEeeCCCCCCCCeEeccC----CCCeEEEEEecCCCeEEEEee------CCCeEEEEECCCCceeEEecCCCC
Q 024676 120 GGFEKILRIFDLNRPDAPPREVGNS----SGSIRTVAWLHSDQTILSSCT------DSGGVRLWDARSGKIVQTLETKSP 189 (264)
Q Consensus 120 ~~~d~~i~~~d~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~------~d~~v~iwd~~~~~~~~~~~~~~~ 189 (264)
.+..+.-|+++....+...+.-+ ...|......++..++++.|- -.|.+.+|..+.+.. +.++++..
T Consensus 123 --T~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~ieGhaa 199 (494)
T 1bpo_A 123 --TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAA 199 (494)
T ss_dssp --CSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE-EEECCSEE
T ss_pred --cCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc-chheeeee
Confidence 34678899987543332222211 234555555666777665443 226788888875543 34555432
Q ss_pred E-EEEEEcCCC---cEEEEe----CCCcEEEEECCCc---ee---eeEEe--cCC-----CCceeeEcCCCCCEEEEecC
Q 024676 190 V-TSAEVSRDG---RYITTA----DGSSVKFWDANHF---GL---VKGYN--MPC-----NTESASLEPKLGNIFIAGGE 248 (264)
Q Consensus 190 v-~~~~~s~~~---~~l~~~----~~~~i~iwd~~~~---~~---~~~~~--~~~-----~~~~~~~~~~~~~~~~~gs~ 248 (264)
. .++.+..+. ++++.+ .++.++|-++... .. -+... ++. .+.....++++| ++..-..
T Consensus 200 ~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kyg-viyviTK 278 (494)
T 1bpo_A 200 SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITK 278 (494)
T ss_dssp EEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTT-EEEEEET
T ss_pred eeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCC-EEEEEec
Confidence 2 122222111 233322 2368889888532 10 11111 111 123344455544 4445556
Q ss_pred CCeEEEEEcCcceee
Q 024676 249 DMWVHVFDFHTGEQI 263 (264)
Q Consensus 249 d~~v~vwd~~~g~~i 263 (264)
-|.+++||+.||..|
T Consensus 279 ~G~i~lyDleTgt~i 293 (494)
T 1bpo_A 279 YGYIHLYDLETGTCI 293 (494)
T ss_dssp TSEEEEEETTTCCEE
T ss_pred CceEEEEecccceee
Confidence 799999999998754
No 322
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.00 E-value=3.1 Score=37.57 Aligned_cols=148 Identities=8% Similarity=0.032 Sum_probs=74.3
Q ss_pred CCeEEEEEeCC----CCcEEEeCCCCceEEee-e-----CCcCCE-EEEEECC-CCcEEEEecCCC------eEEEEeCC
Q 024676 30 DGFFLVSASKD----SSPMLRNGETGDWIGTF-E-----GHKGAV-WSCCLDA-NALFSASGSADF------TAKLWDAL 91 (264)
Q Consensus 30 ~g~~l~t~s~d----~~v~i~~~~~~~~~~~~-~-----~H~~~V-~~v~~~~-~~~~l~s~s~D~------~v~iwd~~ 91 (264)
++..++.|+.+ ..+.++|..++++...- . ...... .+++..+ ++..++.|+.++ .+.+||..
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 45566666643 35677888888765322 1 111111 2223332 666666666543 46778877
Q ss_pred CCcEEEE--eecCCeEEEEEECCCCCEEEEeeCCC--cEEEeeCCCCCCCCeEecc------CCCCeEEEEEecCCCeEE
Q 024676 92 TGDEKHS--FEHKHIVRACAFSEDTHLLLTGGFEK--ILRIFDLNRPDAPPREVGN------SSGSIRTVAWLHSDQTIL 161 (264)
Q Consensus 92 ~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~d~--~i~~~d~~~~~~~~~~~~~------~~~~i~~~~~~~~~~~~~ 161 (264)
+..=... ......-..++.-.++++++.|+.++ .+.+||..+... ..... ....-..+.+....+.++
T Consensus 477 t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W--~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 477 TREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIF--KDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEE--EECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCce--EEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 6531111 11111112233324788888887654 688888876432 22111 111112233343324454
Q ss_pred EEeeC--C-----CeEEEEECCCCc
Q 024676 162 SSCTD--S-----GGVRLWDARSGK 179 (264)
Q Consensus 162 ~~~~~--d-----~~v~iwd~~~~~ 179 (264)
+.|+. + ..+.+||+.+.+
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EECCcCCCCCeeeCcEEEEEccCCc
Confidence 44433 1 458899998877
No 323
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=93.88 E-value=1 Score=36.67 Aligned_cols=52 Identities=17% Similarity=0.240 Sum_probs=27.3
Q ss_pred CCeEEEEEeC-C---------CCcEEEeCCCCceEEeeeCC-cCCE-EEEEECCCCcEEEEecCC
Q 024676 30 DGFFLVSASK-D---------SSPMLRNGETGDWIGTFEGH-KGAV-WSCCLDANALFSASGSAD 82 (264)
Q Consensus 30 ~g~~l~t~s~-d---------~~v~i~~~~~~~~~~~~~~H-~~~V-~~v~~~~~~~~l~s~s~D 82 (264)
+++..+.|+. + ..+.+||..++++...-... ...- .+++. .++++.+.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE-ETTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE-ECCEEEEEeCcC
Confidence 4556666665 2 35788899888765321111 1111 12222 456666677654
No 324
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.85 E-value=5.4 Score=39.18 Aligned_cols=212 Identities=10% Similarity=0.112 Sum_probs=111.7
Q ss_pred CcEEEeCCCCceE--EeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEE
Q 024676 42 SPMLRNGETGDWI--GTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLT 119 (264)
Q Consensus 42 ~v~i~~~~~~~~~--~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 119 (264)
+|.|.|...+..+ +.+.+- +.-.+|..+.+|-= ...+++|+|+.+...+..+....+|..-.|-....+-+.
T Consensus 49 ~vvIidl~~~~~~~rrpi~Ad-----sAIMnP~~~iiALr-ag~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~lV 122 (1630)
T 1xi4_A 49 QVVIIDMNDPSNPIRRPISAD-----SAIMNPASKVIALK-AGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALV 122 (1630)
T ss_pred eEEEEECCCCCCcccccccch-----hhccCCCcceEEEe-cCCeEEEeehHHhhhhcccccCCCceEEEecCCCeeEEE
Confidence 5666676654321 222221 12245666554432 367899999999888888777788888888766655443
Q ss_pred eeCCCcEEEeeCCCCCCCCeEeccC----CCCeEEEEEecCCCeEEEEee------CCCeEEEEECCCCceeEEecCCCC
Q 024676 120 GGFEKILRIFDLNRPDAPPREVGNS----SGSIRTVAWLHSDQTILSSCT------DSGGVRLWDARSGKIVQTLETKSP 189 (264)
Q Consensus 120 ~~~d~~i~~~d~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~------~d~~v~iwd~~~~~~~~~~~~~~~ 189 (264)
.+..+.-|++.....+...+..+ ...|....-.++..++++.|- -.|.+.+|..+.+.. +.++++..
T Consensus 123 --T~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s-Q~iegha~ 199 (1630)
T 1xi4_A 123 --TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAA 199 (1630)
T ss_pred --cCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc-hhhhHhHh
Confidence 23678999986433222211111 234555555666677665443 236778887765432 22332211
Q ss_pred -EEEEEEc---CCCcEEEEe----CCCcEEEEECCCc-eeeeEE-------ecCC-----CCceeeEcCCCCCEEEEecC
Q 024676 190 -VTSAEVS---RDGRYITTA----DGSSVKFWDANHF-GLVKGY-------NMPC-----NTESASLEPKLGNIFIAGGE 248 (264)
Q Consensus 190 -v~~~~~s---~~~~~l~~~----~~~~i~iwd~~~~-~~~~~~-------~~~~-----~~~~~~~~~~~~~~~~~gs~ 248 (264)
...+... +...+++.+ .++.++|-++... .....| .++. .+.....+++.| ++..-..
T Consensus 200 ~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g-~iy~itk 278 (1630)
T 1xi4_A 200 SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITK 278 (1630)
T ss_pred hhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccC-EEEEEec
Confidence 1111111 111233222 2467888887442 101111 1111 122333444433 3445556
Q ss_pred CCeEEEEEcCcceee
Q 024676 249 DMWVHVFDFHTGEQI 263 (264)
Q Consensus 249 d~~v~vwd~~~g~~i 263 (264)
-|.+++||+.||..|
T Consensus 279 ~G~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 279 YGYIHLYDLETGTCI 293 (1630)
T ss_pred CceEEEEecccchhh
Confidence 789999999988654
No 325
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=93.58 E-value=2.2 Score=33.90 Aligned_cols=176 Identities=13% Similarity=0.065 Sum_probs=82.6
Q ss_pred EEEecCCCeEEEEeCCCCcEE-EEeecC-CeEEEEEECCCCCEEEEeeC-----C------CcEEEeeCCCCCCCCeEec
Q 024676 76 SASGSADFTAKLWDALTGDEK-HSFEHK-HIVRACAFSEDTHLLLTGGF-----E------KILRIFDLNRPDAPPREVG 142 (264)
Q Consensus 76 l~s~s~D~~v~iwd~~~~~~~-~~~~~~-~~v~~~~~~~~~~~l~s~~~-----d------~~i~~~d~~~~~~~~~~~~ 142 (264)
++.|+ ..+..||..++.=. ...+.. ..........++++++.|+. . ..+..||..+.+. ....
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W--~~~~ 83 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW--LGMP 83 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE--EECC
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeE--EECC
Confidence 34454 46888998876522 122111 11122233457788888873 1 1256778765432 2221
Q ss_pred cCCCCe--EEEEEecCCCeEEEEeeC--------CCeEEEEECCCCceeEE--ecCCCCEEEEEEcCCCcEEE-EeC-C-
Q 024676 143 NSSGSI--RTVAWLHSDQTILSSCTD--------SGGVRLWDARSGKIVQT--LETKSPVTSAEVSRDGRYIT-TAD-G- 207 (264)
Q Consensus 143 ~~~~~i--~~~~~~~~~~~~~~~~~~--------d~~v~iwd~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~-~~~-~- 207 (264)
....+. ..++.. ++.+++.++. -..+.+||+.+.+-... +.....-.+++. -++++++ ++. +
T Consensus 84 ~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~ 160 (315)
T 4asc_A 84 PLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSD 160 (315)
T ss_dssp CBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTT
T ss_pred CCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCC
Confidence 111111 112222 3344444331 14588999988753221 111111112222 3455544 443 1
Q ss_pred ----CcEEEEECCCceeeeEEecCCCC--ceeeEcCCCCCEEEEecCCC-----eEEEEEcCcc
Q 024676 208 ----SSVKFWDANHFGLVKGYNMPCNT--ESASLEPKLGNIFIAGGEDM-----WVHVFDFHTG 260 (264)
Q Consensus 208 ----~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~gs~d~-----~v~vwd~~~g 260 (264)
..+.+||..+.+=...-..+... ...... .+++++.||.++ .+.+||..+.
T Consensus 161 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred CcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCC
Confidence 35888998765321111122111 112222 467888888654 5788887765
No 326
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=93.50 E-value=5.7 Score=38.24 Aligned_cols=208 Identities=13% Similarity=0.079 Sum_probs=109.6
Q ss_pred EEEEEeCCCCcEEEeCCCCceE--EeeeCCcCCEEEEEECCC------CcEEEEecC-CCeEEEEeCCCCcEEEEeec--
Q 024676 33 FLVSASKDSSPMLRNGETGDWI--GTFEGHKGAVWSCCLDAN------ALFSASGSA-DFTAKLWDALTGDEKHSFEH-- 101 (264)
Q Consensus 33 ~l~t~s~d~~v~i~~~~~~~~~--~~~~~H~~~V~~v~~~~~------~~~l~s~s~-D~~v~iwd~~~~~~~~~~~~-- 101 (264)
+++.++ .+.+.++.+..+++. .... -.+.|.|+++.+. +.+++.|.. |++++|+.+.+.+.+.....
T Consensus 525 ~vvva~-g~~l~~fel~~~~L~~~~~~~-l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~ 602 (1158)
T 3ei3_A 525 QVVVAV-GRALYYLQIHPQELRQISHTE-MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGG 602 (1158)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEEEEE-CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCS
T ss_pred EEEEEE-CCEEEEEEeeCCceeeecccC-CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCC
Confidence 455554 456666666555432 1111 2457999998753 468888886 99999999987766554332
Q ss_pred CCeEEEEEEC--CCCCEEEEeeCCCcEEEeeCC--CCCCCCe--EeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEEC
Q 024676 102 KHIVRACAFS--EDTHLLLTGGFEKILRIFDLN--RPDAPPR--EVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDA 175 (264)
Q Consensus 102 ~~~v~~~~~~--~~~~~l~s~~~d~~i~~~d~~--~~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~ 175 (264)
......+.+. ....+|..|..||.+..+.++ +++.... ...+ ..++.-..+...+..-+..+++ +-..++-.
T Consensus 603 ~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~-rp~liy~~ 680 (1158)
T 3ei3_A 603 EIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSD-RPTVIYSS 680 (1158)
T ss_dssp SCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESS-SCEEEEES
T ss_pred CCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECC-CCEEEEEc
Confidence 2233333322 233567788889987666554 2222111 1111 1233333333333333333333 55555554
Q ss_pred CCCceeEEecCCCCEEEEEEcCCC--cEEEEeCCCcEEEEECCCc--eeeeEEecCCCCceeeEcCCCCCEEE
Q 024676 176 RSGKIVQTLETKSPVTSAEVSRDG--RYITTADGSSVKFWDANHF--GLVKGYNMPCNTESASLEPKLGNIFI 244 (264)
Q Consensus 176 ~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~~~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (264)
++.-....+....--....|+... .-++..+++.++|..+.+. -.+++++..+.+..++.++..+.+++
T Consensus 681 ~~~l~~s~l~~~~v~~~~~F~se~~~~g~v~~~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v 753 (1158)
T 3ei3_A 681 NHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGV 753 (1158)
T ss_dssp SSSEEEEEBSSSCCCEEEEECCSSSTTEEEEECSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEE
T ss_pred CCceEEeccChHHhceEeccCcccCCCcEEEEcCCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEE
Confidence 432222333332222333454322 2344555567888876543 34677777788888888876444433
No 327
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=92.66 E-value=3.7 Score=33.78 Aligned_cols=165 Identities=10% Similarity=0.049 Sum_probs=94.2
Q ss_pred CCCCcEEEeCCC--CceE-EeeeC-----CcCCEEEEEECC--CC--cEEEEec--CCCeEEEEeCCCCc----EEEEee
Q 024676 39 KDSSPMLRNGET--GDWI-GTFEG-----HKGAVWSCCLDA--NA--LFSASGS--ADFTAKLWDALTGD----EKHSFE 100 (264)
Q Consensus 39 ~d~~v~i~~~~~--~~~~-~~~~~-----H~~~V~~v~~~~--~~--~~l~s~s--~D~~v~iwd~~~~~----~~~~~~ 100 (264)
.+|.|.++|..+ ++.. -.+.+ ..-.-+.+.+.+ ++ .+++.-. .+.++.+|++.... .+..++
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 688899999874 2321 12222 223456666644 34 2334422 25788898875532 222333
Q ss_pred cC--CeEEEEEECCCCCEEEEee---CC------------CcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEE
Q 024676 101 HK--HIVRACAFSEDTHLLLTGG---FE------------KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSS 163 (264)
Q Consensus 101 ~~--~~v~~~~~~~~~~~l~s~~---~d------------~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 163 (264)
+. ...+.+.+.+++.+.++.. .| ..-++|-+..++ .......-...+.++|+|++..+.++
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~--~~~~~~~l~~pNGia~spDg~~lYva 238 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPND--VRVVAEGFDFANGINISPDGKYVYIA 238 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTC--CEEEEEEESSEEEEEECTTSSEEEEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCe--EEEeecCCcccCcceECCCCCEEEEE
Confidence 32 3478899999998766643 11 122333332222 22221222346789999988888887
Q ss_pred eeCCCeEEEEECCC-Cce--eEEecCCCCEEEEEEcC-CCcEEEEe
Q 024676 164 CTDSGGVRLWDARS-GKI--VQTLETKSPVTSAEVSR-DGRYITTA 205 (264)
Q Consensus 164 ~~~d~~v~iwd~~~-~~~--~~~~~~~~~v~~~~~s~-~~~~l~~~ 205 (264)
-+..+.|..||+.. ++. ...+......-.+++.+ +|.+.+++
T Consensus 239 dt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 239 ELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp EGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred eCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEe
Confidence 77778999999863 332 22333345577899999 58876643
No 328
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=91.76 E-value=5.5 Score=33.86 Aligned_cols=58 Identities=10% Similarity=0.016 Sum_probs=38.1
Q ss_pred CEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEE--Eee-------cCCeEEEEEECCC---CCEEEEe
Q 024676 63 AVWSCCLDANALFSASGSADFTAKLWDALTGDEKH--SFE-------HKHIVRACAFSED---THLLLTG 120 (264)
Q Consensus 63 ~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~--~~~-------~~~~v~~~~~~~~---~~~l~s~ 120 (264)
.-+.++|.|++.++++-...+.|++++..++.... .+. .......++++|+ +..|+.+
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 45789999999988876554578888765554322 221 1345678999995 5555544
No 329
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.21 E-value=2.7 Score=36.85 Aligned_cols=116 Identities=10% Similarity=0.126 Sum_probs=72.2
Q ss_pred cCCeEEEEEECCCCCEEEEee-CCCcEEEeeCCCC------CC-----CCeEeccCCCCeEEEEEecCCCeEEEEeeCCC
Q 024676 101 HKHIVRACAFSEDTHLLLTGG-FEKILRIFDLNRP------DA-----PPREVGNSSGSIRTVAWLHSDQTILSSCTDSG 168 (264)
Q Consensus 101 ~~~~v~~~~~~~~~~~l~s~~-~d~~i~~~d~~~~------~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~ 168 (264)
..+....+..+|++++++.++ .+.++.++|.++- +. .........-.....+|.+++ ...++..-|.
T Consensus 321 ~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aYTtlfidS 399 (638)
T 3sbq_A 321 VPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-NAYTTLFIDS 399 (638)
T ss_dssp ESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-EEEEEETTTT
T ss_pred CCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-ceEeeeeecc
Confidence 334456788999999988765 5788999998631 11 001011111223455666544 6777888889
Q ss_pred eEEEEECCCC----------ceeEEecCCCCEEEEEE------cCCCcEEEEe----CCCc----------EEEEECCC
Q 024676 169 GVRLWDARSG----------KIVQTLETKSPVTSAEV------SRDGRYITTA----DGSS----------VKFWDANH 217 (264)
Q Consensus 169 ~v~iwd~~~~----------~~~~~~~~~~~v~~~~~------s~~~~~l~~~----~~~~----------i~iwd~~~ 217 (264)
+|--|++.+. ..+..+..+..+--+.. .|+|++|++. -|+. -++.|+..
T Consensus 400 qvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIsG 478 (638)
T 3sbq_A 400 QVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDISG 478 (638)
T ss_dssp EEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECSS
T ss_pred eEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecCC
Confidence 9999998753 34555555555554544 4788888764 2443 36778754
No 330
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=91.18 E-value=4.1 Score=31.20 Aligned_cols=137 Identities=9% Similarity=-0.046 Sum_probs=68.8
Q ss_pred CCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEEEeecCCe--------EEEEEECCCCCEEEEeeCCCcEEEeeCCC
Q 024676 62 GAVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFEHKHI--------VRACAFSEDTHLLLTGGFEKILRIFDLNR 133 (264)
Q Consensus 62 ~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~--------v~~~~~~~~~~~l~s~~~d~~i~~~d~~~ 133 (264)
..+..++|+|++.+-+. .++.+.--+..+.....=+..... ...+-++|++.+.++ .|+.|.-++-.+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 36678999999886554 566544334333111000001112 257889999987666 668887776533
Q ss_pred CCCC-C----eEeccCC-CCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCcee------EEec-CC-CCEEEEEEcCCC
Q 024676 134 PDAP-P----REVGNSS-GSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIV------QTLE-TK-SPVTSAEVSRDG 199 (264)
Q Consensus 134 ~~~~-~----~~~~~~~-~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~------~~~~-~~-~~v~~~~~s~~~ 199 (264)
.... . ..++... ..+..+.+.| ++.+.+.. |+.+.-+...++... ..+. .. ..-.-+.++|++
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G 193 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVG 193 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTS
T ss_pred CCCCceeccccEeccCCCCceEEEEECC-CceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCC
Confidence 2211 0 1111111 2456666555 44555544 466543333322210 1111 11 223446688888
Q ss_pred cEEEEe
Q 024676 200 RYITTA 205 (264)
Q Consensus 200 ~~l~~~ 205 (264)
.+.+..
T Consensus 194 ~l~~v~ 199 (236)
T 1tl2_A 194 TLFGVQ 199 (236)
T ss_dssp CEEEEE
T ss_pred cEEEEe
Confidence 877666
No 331
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=91.00 E-value=5.6 Score=32.53 Aligned_cols=145 Identities=12% Similarity=0.061 Sum_probs=79.2
Q ss_pred cCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEE--Ee-----ecCCeEEEEEECCC---CCEEEEe---eCCCcEE
Q 024676 61 KGAVWSCCLDANALFSASGSADFTAKLWDALTGDEKH--SF-----EHKHIVRACAFSED---THLLLTG---GFEKILR 127 (264)
Q Consensus 61 ~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~--~~-----~~~~~v~~~~~~~~---~~~l~s~---~~d~~i~ 127 (264)
-..-+.++|.||+.++++-...|.|++++..++.... .+ ........++++|+ +..|+.. ..++.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 3456899999999988887668999999866554322 12 12345789999995 4455442 2334455
Q ss_pred EeeCCCCC-----C-CCe----Eecc-CCCCeEEEEEecCCCeEEEEee------------CCCeEEEEECCCC------
Q 024676 128 IFDLNRPD-----A-PPR----EVGN-SSGSIRTVAWLHSDQTILSSCT------------DSGGVRLWDARSG------ 178 (264)
Q Consensus 128 ~~d~~~~~-----~-~~~----~~~~-~~~~i~~~~~~~~~~~~~~~~~------------~d~~v~iwd~~~~------ 178 (264)
-|.+.... . ..+ .+.. .......+.|.+++..+++.+. ..+.|.=.+....
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nP 190 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNP 190 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCS
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCC
Confidence 55554311 1 011 1111 1112334677776654444332 1234444454422
Q ss_pred ---ceeEEecCCCCEEEEEEcCCCcEEEEeC
Q 024676 179 ---KIVQTLETKSPVTSAEVSRDGRYITTAD 206 (264)
Q Consensus 179 ---~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 206 (264)
..+....+ .....++|+|+|.+.++-.
T Consensus 191 f~~~~i~a~G~-RNp~Gla~dp~G~L~~~d~ 220 (347)
T 3das_A 191 FPGSPVYSYGH-RNVQGLAWDDKQRLFASEF 220 (347)
T ss_dssp STTCCEEEBCC-SBCCEEEECTTCCEEEEEC
T ss_pred CCCCeEEeeCC-CCcceEEECCCCCEEEEec
Confidence 12333333 3455789999988877643
No 332
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=89.87 E-value=11 Score=34.12 Aligned_cols=227 Identities=9% Similarity=-0.003 Sum_probs=108.4
Q ss_pred CCCeEEEEE-eCCC----CcEEEeCCCCceEE-eeeC-CcC------CEEEEEECCCCcEEEEe----------cCCCeE
Q 024676 29 PDGFFLVSA-SKDS----SPMLRNGETGDWIG-TFEG-HKG------AVWSCCLDANALFSASG----------SADFTA 85 (264)
Q Consensus 29 ~~g~~l~t~-s~d~----~v~i~~~~~~~~~~-~~~~-H~~------~V~~v~~~~~~~~l~s~----------s~D~~v 85 (264)
|++++++.+ |..| .++++|+.+++++. .|.. -+. .-..++|..+..++++. +....|
T Consensus 139 ~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~~~v 218 (711)
T 4hvt_A 139 QNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYPNSL 218 (711)
T ss_dssp SSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSBCEE
T ss_pred CCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCCCEE
Confidence 577655444 3333 47889999998763 2330 001 00223666444454432 223689
Q ss_pred EEEeCCCCc--EEEEee--cCCeEEEEEECCCCC-----EEEEeeC---CCcEEEeeCCCCCCCCeEeccCCCCeEEEEE
Q 024676 86 KLWDALTGD--EKHSFE--HKHIVRACAFSEDTH-----LLLTGGF---EKILRIFDLNRPDAPPREVGNSSGSIRTVAW 153 (264)
Q Consensus 86 ~iwd~~~~~--~~~~~~--~~~~v~~~~~~~~~~-----~l~s~~~---d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~ 153 (264)
+.|...+.. -...++ ....-.....+++++ .+++.+. ...+.+.++..+......+...... . +..
T Consensus 219 ~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~-~~~ 296 (711)
T 4hvt_A 219 YIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPSDA-T-LQG 296 (711)
T ss_dssp EEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCTTC-E-EEE
T ss_pred EEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCCcc-e-Eee
Confidence 999887653 223333 222223444566665 3444432 2445555654322211222111111 1 122
Q ss_pred ecCCCeEEE-Ee---------eCCCeEEEEECCCCc-------eeEE-ecC--CCCEEEEEEcCCCcEEEEeCCC--cEE
Q 024676 154 LHSDQTILS-SC---------TDSGGVRLWDARSGK-------IVQT-LET--KSPVTSAEVSRDGRYITTADGS--SVK 211 (264)
Q Consensus 154 ~~~~~~~~~-~~---------~~d~~v~iwd~~~~~-------~~~~-~~~--~~~v~~~~~s~~~~~l~~~~~~--~i~ 211 (264)
.+. +.+++ +. ...+.|-..|+.++. .... +.. ...+..+.+.++..+++...++ .+.
T Consensus 297 ~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~l~ 375 (711)
T 4hvt_A 297 SFK-EYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDRVFLATYDNVVAKVV 375 (711)
T ss_dssp EET-TEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSCEEEEEEETTEEEEE
T ss_pred eEC-CEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCEEEEEEEECCEEEEE
Confidence 333 34433 21 134678888887642 1122 322 3357788888875555555454 577
Q ss_pred EEECCCce-eeeE-EecCCC-Cc-eeeEcCCCCCEEEEecC---CCeEEEEEcC
Q 024676 212 FWDANHFG-LVKG-YNMPCN-TE-SASLEPKLGNIFIAGGE---DMWVHVFDFH 258 (264)
Q Consensus 212 iwd~~~~~-~~~~-~~~~~~-~~-~~~~~~~~~~~~~~gs~---d~~v~vwd~~ 258 (264)
++|+.+++ .++. +..+.. .. .....+..+.++++.+. =..++.+|+.
T Consensus 376 ~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 376 TFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 78876553 2333 434321 11 12223333455555443 3456666654
No 333
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=89.76 E-value=11 Score=33.95 Aligned_cols=188 Identities=12% Similarity=0.077 Sum_probs=88.8
Q ss_pred CCCcEEEEecCC----CeEEEEeCCCCcEEEEe-e-------cCCeEEEEEECC-CCCEEEEeeCCC------cEEEeeC
Q 024676 71 ANALFSASGSAD----FTAKLWDALTGDEKHSF-E-------HKHIVRACAFSE-DTHLLLTGGFEK------ILRIFDL 131 (264)
Q Consensus 71 ~~~~~l~s~s~D----~~v~iwd~~~~~~~~~~-~-------~~~~v~~~~~~~-~~~~l~s~~~d~------~i~~~d~ 131 (264)
.++..++.|+.+ ..+.++|..++.-.... . ....-.+++..+ ++++++.|+.++ .+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 345555666643 35777887766422111 1 111112223333 677777777543 3667887
Q ss_pred CCCCCCCeEeccC--CCCeEEEEEecCCCeEEEEeeCCC-eEEEEECCCCceeEEec------CCCCEEEEEEcCC-CcE
Q 024676 132 NRPDAPPREVGNS--SGSIRTVAWLHSDQTILSSCTDSG-GVRLWDARSGKIVQTLE------TKSPVTSAEVSRD-GRY 201 (264)
Q Consensus 132 ~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~d~-~v~iwd~~~~~~~~~~~------~~~~v~~~~~s~~-~~~ 201 (264)
.+.+. ...... .-.-.+.+...++..++.+|.... .+.+||..+.+-...-. .......+.+..+ +++
T Consensus 476 ~t~~W--~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 476 KTREW--SMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp TTTEE--EECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred CCCcE--EECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 65432 221111 111122222234444444433222 68999998876432111 1111222444544 555
Q ss_pred EEE-eC--C-----CcEEEEECCCcee-----eeEE-ecC-CC-C-ceeeEcCCCCCEEEEecCC--------CeEEEEE
Q 024676 202 ITT-AD--G-----SSVKFWDANHFGL-----VKGY-NMP-CN-T-ESASLEPKLGNIFIAGGED--------MWVHVFD 256 (264)
Q Consensus 202 l~~-~~--~-----~~i~iwd~~~~~~-----~~~~-~~~-~~-~-~~~~~~~~~~~~~~~gs~d--------~~v~vwd 256 (264)
++. +. + ..+..||+.+..- .... ..+ .. . ....... ++.+++.||.+ ..+.+||
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~~yd 632 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYIT-PRKLLIVGGTSPSGLFDRTNSIISLD 632 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEE-TTEEEEECCBCSSCCCCTTTSEEEEE
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeC-CCEEEEECCccCCCCCCCCCeEEEEE
Confidence 444 32 1 3588899877651 1111 111 11 1 1122221 26788888853 4588999
Q ss_pred cCcce
Q 024676 257 FHTGE 261 (264)
Q Consensus 257 ~~~g~ 261 (264)
..+.+
T Consensus 633 ~~t~~ 637 (695)
T 2zwa_A 633 PLSET 637 (695)
T ss_dssp TTTTE
T ss_pred CCCCe
Confidence 87653
No 334
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=88.67 E-value=7.8 Score=30.71 Aligned_cols=177 Identities=15% Similarity=0.179 Sum_probs=80.9
Q ss_pred EEEecCCCeEEEEeCCCCcEEE-EeecCC-eEEEEEECCCCCEEEEeeC----CC-------cEEEeeCCCCCCCCeEec
Q 024676 76 SASGSADFTAKLWDALTGDEKH-SFEHKH-IVRACAFSEDTHLLLTGGF----EK-------ILRIFDLNRPDAPPREVG 142 (264)
Q Consensus 76 l~s~s~D~~v~iwd~~~~~~~~-~~~~~~-~v~~~~~~~~~~~l~s~~~----d~-------~i~~~d~~~~~~~~~~~~ 142 (264)
++.|+. .+..||..+++-.. ...... .........++++++.|+. ++ .+..||..+.+. ....
T Consensus 19 ~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W--~~~~ 94 (318)
T 2woz_A 19 LLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEW--VGLP 94 (318)
T ss_dssp EEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEE--EECS
T ss_pred hhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcE--EECC
Confidence 344443 37788887765222 111111 1122233556778887773 11 156777765432 2211
Q ss_pred c--CCCCeEEEEEecCCCeEEEEeeCC------CeEEEEECCCCceeEEecCCCCE--EEEEEcCCCcEEEE-eC--C--
Q 024676 143 N--SSGSIRTVAWLHSDQTILSSCTDS------GGVRLWDARSGKIVQTLETKSPV--TSAEVSRDGRYITT-AD--G-- 207 (264)
Q Consensus 143 ~--~~~~i~~~~~~~~~~~~~~~~~~d------~~v~iwd~~~~~~~~~~~~~~~v--~~~~~s~~~~~l~~-~~--~-- 207 (264)
. ..-.-.+++.. ++..+++++... ..+.+||+.+.+-...-....+. .+++. .++++++. +. +
T Consensus 95 ~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~ 172 (318)
T 2woz_A 95 PLPSARCLFGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKK 172 (318)
T ss_dssp CBSSCBCSCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSC
T ss_pred CCCccccccceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCC
Confidence 1 11111122222 344444444331 24788899887643322211111 12222 35555443 32 1
Q ss_pred --CcEEEEECCCceeeeEEecCCCCc--eeeEcCCCCCEEEEecCC-----CeEEEEEcCcc
Q 024676 208 --SSVKFWDANHFGLVKGYNMPCNTE--SASLEPKLGNIFIAGGED-----MWVHVFDFHTG 260 (264)
Q Consensus 208 --~~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~gs~d-----~~v~vwd~~~g 260 (264)
..+.+||..+.+=...-..+.... ..... .+++++.||.+ ..+.+||..+.
T Consensus 173 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 173 CTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred ccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCC
Confidence 358899987753211111221111 12222 46788888754 34677887654
No 335
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=88.58 E-value=8.9 Score=31.28 Aligned_cols=223 Identities=12% Similarity=0.073 Sum_probs=114.2
Q ss_pred CCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCc-eEEeee---CCcCCEEEEEECCC----CcEEEEecC---C---
Q 024676 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGD-WIGTFE---GHKGAVWSCCLDAN----ALFSASGSA---D--- 82 (264)
Q Consensus 17 ~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~-~~~~~~---~H~~~V~~v~~~~~----~~~l~s~s~---D--- 82 (264)
..-.+|+|.| +|++++ +..++.|++++ .+++ .+..+. .-......++++|+ +.+.++-+. +
T Consensus 29 ~~P~~ia~~p---dG~l~V-~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 29 EVPWSIAPLG---GGRYLV-TERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp SCEEEEEEEE---TTEEEE-EETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCeEEEEcC---CCeEEE-EeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 3456899996 888554 56668888886 3454 222221 12345788999997 444444332 3
Q ss_pred -CeEEEEeCCCC--c-----EE-EEee--cCCeEEEEEECCCCCEEEEeeC-------------CCcEEEeeCCCCCCC-
Q 024676 83 -FTAKLWDALTG--D-----EK-HSFE--HKHIVRACAFSEDTHLLLTGGF-------------EKILRIFDLNRPDAP- 137 (264)
Q Consensus 83 -~~v~iwd~~~~--~-----~~-~~~~--~~~~v~~~~~~~~~~~l~s~~~-------------d~~i~~~d~~~~~~~- 137 (264)
..|..|+.... . .+ ..+. ..+....+.|.|++.+.++.+. .+.|.-++.+. +..
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG-~~p~ 182 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEG-RPPA 182 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTS-CCCT
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCC-CCCC
Confidence 45666665543 1 11 1122 1223467899999987776432 13455555432 110
Q ss_pred ------CeE-eccCCCCeEEEEEecCCCeEEEEeeCCC---eEEEEECCC----------------CceeEEe-cCCCCE
Q 024676 138 ------PRE-VGNSSGSIRTVAWLHSDQTILSSCTDSG---GVRLWDARS----------------GKIVQTL-ETKSPV 190 (264)
Q Consensus 138 ------~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~d~---~v~iwd~~~----------------~~~~~~~-~~~~~v 190 (264)
... ...+. ....++|.+.++.+.++-...+ .|.+...-. ..++..+ ..+...
T Consensus 183 ~npf~~~~i~a~G~r-np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap 261 (354)
T 3a9g_A 183 DNPFPNSPIWSYGHR-NPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAP 261 (354)
T ss_dssp TSSSTTCCEEEECCS-CCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCE
T ss_pred CCCCCCCcEEEEccC-CcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCC
Confidence 011 11111 2345677774455555433211 244432111 0123333 234457
Q ss_pred EEEEEc-------CCCcEEEEeC-CCcEEEEECCCc-eee--eEEec--CCCCceeeEcCCCCCEEEEec
Q 024676 191 TSAEVS-------RDGRYITTAD-GSSVKFWDANHF-GLV--KGYNM--PCNTESASLEPKLGNIFIAGG 247 (264)
Q Consensus 191 ~~~~~s-------~~~~~l~~~~-~~~i~iwd~~~~-~~~--~~~~~--~~~~~~~~~~~~~~~~~~~gs 247 (264)
..+++. .+|.++++.- ++.|...++... +.. ..+-. ...+..+.+.++ |.++++..
T Consensus 262 ~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pD-G~lyv~~~ 330 (354)
T 3a9g_A 262 SGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDD-GGILISTS 330 (354)
T ss_dssp EEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTT-SCEEEEEC
T ss_pred cceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCC-CcEEEEEe
Confidence 778873 4667766654 567888887753 222 22211 123455666664 67666653
No 336
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=87.93 E-value=6.4 Score=37.00 Aligned_cols=38 Identities=18% Similarity=0.088 Sum_probs=32.4
Q ss_pred CEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEEEee
Q 024676 63 AVWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFE 100 (264)
Q Consensus 63 ~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~ 100 (264)
.+.+++..++..++.|-+.|+++|||++.++.++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46677777888899999999999999999998877653
No 337
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=87.60 E-value=16 Score=33.06 Aligned_cols=222 Identities=11% Similarity=0.073 Sum_probs=114.3
Q ss_pred CeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEee--eC----CcCCEEEEEECCCCcEEEEecCCCeEEEEeCC
Q 024676 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTF--EG----HKGAVWSCCLDANALFSASGSADFTAKLWDAL 91 (264)
Q Consensus 18 ~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~--~~----H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~ 91 (264)
.|.++.-.+ +|+.-+ |+ ++-+..++..++++.... .. ....|.++...+++.+-+.....| +..+|..
T Consensus 374 ~v~~i~~d~---~g~lWi-gt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~G-l~~~~~~ 447 (758)
T 3ott_A 374 RIRHIYEDK---EQQLWI-AT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGG-IFVVDKH 447 (758)
T ss_dssp CEEEEEECT---TSCEEE-EE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEESSSC-EEEEEHH
T ss_pred ceEEEEECC---CCCEEE-Ee-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEECCCc-eEEEccc
Confidence 366665542 555433 34 345778888877654321 11 234688888888876655333334 5666643
Q ss_pred C-----CcEE---EEee-----cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEecc----CCCCeEEEEEe
Q 024676 92 T-----GDEK---HSFE-----HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGN----SSGSIRTVAWL 154 (264)
Q Consensus 92 ~-----~~~~---~~~~-----~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~----~~~~i~~~~~~ 154 (264)
+ .... ..+. ....|..+..++++.+.+.++..+-+..+|..+.+. ..... ....+.++...
T Consensus 448 ~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~--~~~~~~~~~~~~~~~~i~~d 525 (758)
T 3ott_A 448 KLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREV--TKLFADELTGEKSPNYLLCD 525 (758)
T ss_dssp HHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEE--EEECTTTSCGGGCEEEEEEC
T ss_pred cccccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCce--EEecCCCcCCCcccceEEEC
Confidence 2 1111 1111 123588898899998877434445577788764432 11111 12345555443
Q ss_pred cCCCeEEEEeeCCCeEEEEECCCCceeEE-ec--CCCCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeeeEEecCCC-C
Q 024676 155 HSDQTILSSCTDSGGVRLWDARSGKIVQT-LE--TKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKGYNMPCN-T 230 (264)
Q Consensus 155 ~~~~~~~~~~~~d~~v~iwd~~~~~~~~~-~~--~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~-~ 230 (264)
. ++.+-++ +. +.+..+|.++++...- .. ....+.++... +|.+.+++.. .+..+|..+.+. ..|..+.. .
T Consensus 526 ~-~g~lWig-t~-~Gl~~~~~~~~~~~~~~~~gl~~~~i~~i~~~-~g~lWi~t~~-Gl~~~~~~~~~~-~~~~~~~~~~ 599 (758)
T 3ott_A 526 E-DGLLWVG-FH-GGVMRINPKDESQQSISFGSFSNNEILSMTCV-KNSIWVSTTN-GLWIIDRKTMDA-RQQNMTNKRF 599 (758)
T ss_dssp T-TSCEEEE-ET-TEEEEECC--CCCCBCCCCC---CCEEEEEEE-TTEEEEEESS-CEEEEETTTCCE-EEC--CCCCC
T ss_pred C-CCCEEEE-ec-CceEEEecCCCceEEecccCCCccceEEEEEC-CCCEEEECCC-CeEEEcCCCcee-EEecCCCCce
Confidence 3 3444333 34 4688899876653221 11 12457777664 6776666644 577778876543 33333222 2
Q ss_pred ceeeEcCCCCCEEEEecCCCeEEE
Q 024676 231 ESASLEPKLGNIFIAGGEDMWVHV 254 (264)
Q Consensus 231 ~~~~~~~~~~~~~~~gs~d~~v~v 254 (264)
....+...+| .+.-|+.+|.+++
T Consensus 600 ~~~~~~~~~G-~l~fG~~~Gl~~f 622 (758)
T 3ott_A 600 TSLLFDPKED-CVYLGGADGFGIS 622 (758)
T ss_dssp SEEEEETTTT-EEEEECBSEEEEE
T ss_pred eeeEEECCCC-cEEEecCCceEEE
Confidence 2233333334 4566667775544
No 338
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=87.48 E-value=10 Score=30.85 Aligned_cols=141 Identities=9% Similarity=0.027 Sum_probs=75.3
Q ss_pred CEEEEEECCCCcEEEEecCCCeEEEEeCCCCc-EEEEee----cCCeEEEEEECCC---CCEEEEeeC----C----CcE
Q 024676 63 AVWSCCLDANALFSASGSADFTAKLWDALTGD-EKHSFE----HKHIVRACAFSED---THLLLTGGF----E----KIL 126 (264)
Q Consensus 63 ~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~-~~~~~~----~~~~v~~~~~~~~---~~~l~s~~~----d----~~i 126 (264)
.-+.++|.+++.++++ ..++.|+++| .++. .+..+. .......++++|+ +..|+.+.. + ..|
T Consensus 30 ~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp CEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 4578999999986665 4458899887 3443 222211 1245789999997 555554432 2 456
Q ss_pred EEeeCCCCC--C-----CCeEecc-CCCCeEEEEEecCCCeEEEEeeC------------CCeEEEEECCCC--------
Q 024676 127 RIFDLNRPD--A-----PPREVGN-SSGSIRTVAWLHSDQTILSSCTD------------SGGVRLWDARSG-------- 178 (264)
Q Consensus 127 ~~~d~~~~~--~-----~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~------------d~~v~iwd~~~~-------- 178 (264)
..|+..... . ....... .......+++.+++..+++.+.. .+.|.-+|....
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~ 187 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFP 187 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSST
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCC
Confidence 666654331 0 0111111 11123457777766534433321 135555555432
Q ss_pred -ceeEEecCCCCEEEEEEcC-CCcEEEEeC
Q 024676 179 -KIVQTLETKSPVTSAEVSR-DGRYITTAD 206 (264)
Q Consensus 179 -~~~~~~~~~~~v~~~~~s~-~~~~l~~~~ 206 (264)
..+..... .....++++| ++.++++-.
T Consensus 188 ~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~ 216 (354)
T 3a9g_A 188 NSPIWSYGH-RNPQGIDWHRASGVMVATEH 216 (354)
T ss_dssp TCCEEEECC-SCCCEEEECTTTCCEEEEEC
T ss_pred CCcEEEEcc-CCcceEEEeCCCCCEEEEec
Confidence 12333333 3355789999 677776643
No 339
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=85.14 E-value=10 Score=33.32 Aligned_cols=84 Identities=11% Similarity=-0.012 Sum_probs=57.2
Q ss_pred CeEEEEEecCCCeEEEEeeCCCeEEEEECCCCce-------------eEEecCCCCEEEEEEcCCCcEEEEe-CCCcEEE
Q 024676 147 SIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKI-------------VQTLETKSPVTSAEVSRDGRYITTA-DGSSVKF 212 (264)
Q Consensus 147 ~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~-------------~~~~~~~~~v~~~~~s~~~~~l~~~-~~~~i~i 212 (264)
+...+...|++.++++++--+.++.++|.++... ....+..-...-.+|.++|...++- -|..|--
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvk 403 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVK 403 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEE
Confidence 3455677899999999888888999999985211 2223333345667899999555555 4789999
Q ss_pred EECCCc----------eeeeEEecCCCC
Q 024676 213 WDANHF----------GLVKGYNMPCNT 230 (264)
Q Consensus 213 wd~~~~----------~~~~~~~~~~~~ 230 (264)
|++..- ..+.....+.++
T Consensus 404 Wni~~a~~~~~g~~~~~v~~k~dv~Yqp 431 (638)
T 3sbq_A 404 WNMEEAVRAYKGEKVNYIKQKLDVHYQP 431 (638)
T ss_dssp EEHHHHHHHHTTCCCCCEEEEEECSSCE
T ss_pred EeccHHHHHhcCccCCeeeeccccccCC
Confidence 998652 345666655444
No 340
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=84.72 E-value=12 Score=28.72 Aligned_cols=102 Identities=14% Similarity=0.009 Sum_probs=59.6
Q ss_pred CCCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCce---E---Eeee--CCcCCEEEEEECCCCcEEEEecCCCeEEE
Q 024676 16 SRPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDW---I---GTFE--GHKGAVWSCCLDANALFSASGSADFTAKL 87 (264)
Q Consensus 16 ~~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~---~---~~~~--~H~~~V~~v~~~~~~~~l~s~s~D~~v~i 87 (264)
-..+..++|+| +|.+-+. .++.+.-.+..+... . ..+. +-.. -.++.|.+++.+-++ .|+.|.-
T Consensus 40 w~~~~~laf~P---~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr 111 (236)
T 1tl2_A 40 WSNFKFLFLSP---GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYK 111 (236)
T ss_dssp CTTCSEEEECT---TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEE
T ss_pred cccceeEEECC---CccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEE
Confidence 34677999997 7875444 666655555544211 1 1111 1111 367889999987666 5788877
Q ss_pred EeCCCCcEE-----EEeecC---CeEEEEEECCCCCEEEEeeCCCcEE
Q 024676 88 WDALTGDEK-----HSFEHK---HIVRACAFSEDTHLLLTGGFEKILR 127 (264)
Q Consensus 88 wd~~~~~~~-----~~~~~~---~~v~~~~~~~~~~~l~s~~~d~~i~ 127 (264)
++-.+.... .+.-.. +.+..+.+.|++.+.+.. |+.+.
T Consensus 112 ~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 112 ASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp ESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred eCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 775332110 011011 357889999999866655 77654
No 341
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=82.09 E-value=19 Score=29.24 Aligned_cols=230 Identities=10% Similarity=0.044 Sum_probs=113.7
Q ss_pred CeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCce---EEee----eCCcCCEEEEEECCC----CcEEEEecC-----
Q 024676 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDW---IGTF----EGHKGAVWSCCLDAN----ALFSASGSA----- 81 (264)
Q Consensus 18 ~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~---~~~~----~~H~~~V~~v~~~~~----~~~l~s~s~----- 81 (264)
.-++|+|.| +|++|..+...+.|++++.. +.. +..+ ..-.+....++++|+ +.+.++-+.
T Consensus 19 ~P~~i~~~p---dG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g 94 (353)
T 2g8s_A 19 HPWALAFLP---DNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDG 94 (353)
T ss_dssp SEEEEEECS---TTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSS
T ss_pred CcEEEEEcC---CCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCC
Confidence 346899986 88834455677888888753 332 1111 112345688999995 444444322
Q ss_pred --CCeEEEEeCCCC--c---EEEEe---e----cCCeEEEEEECCCCCEEEEeeC-------------CCcEEEeeCCCC
Q 024676 82 --DFTAKLWDALTG--D---EKHSF---E----HKHIVRACAFSEDTHLLLTGGF-------------EKILRIFDLNRP 134 (264)
Q Consensus 82 --D~~v~iwd~~~~--~---~~~~~---~----~~~~v~~~~~~~~~~~l~s~~~-------------d~~i~~~d~~~~ 134 (264)
...|..|+.... . ....+ . ..+.-..+.|.|++.+.++.+. .+.|.-++.+..
T Consensus 95 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 95 KAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp CEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred CceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 124544555432 1 11111 1 1122457899999976665433 235655665422
Q ss_pred CC-----------CCeEe-ccCCCCeEEEEEecCCCeEEEEeeC-CC--eEEEEECCCC---------------------
Q 024676 135 DA-----------PPREV-GNSSGSIRTVAWLHSDQTILSSCTD-SG--GVRLWDARSG--------------------- 178 (264)
Q Consensus 135 ~~-----------~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~-d~--~v~iwd~~~~--------------------- 178 (264)
-. ..+.. ..+ .....++|.+..+.+.++-.. ++ .|.+. ..+
T Consensus 175 ~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i--~~G~nyGwp~~~~~~~~~~~~~~~ 251 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIP--QKGKNYGWPLATWGINYSGFKIPE 251 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECC--CTTCBCCTTTBCSSBCTTSSCCTT
T ss_pred CCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEe--ccCCcCCCCCccCCCCCCCCccCc
Confidence 00 01111 111 235667787755555554322 11 23221 111
Q ss_pred ----------ceeEEecCCCCEEEEEEcC-------CCcEEEEeC-CCcEEEEECCCceeeeEEec----CCCCceeeEc
Q 024676 179 ----------KIVQTLETKSPVTSAEVSR-------DGRYITTAD-GSSVKFWDANHFGLVKGYNM----PCNTESASLE 236 (264)
Q Consensus 179 ----------~~~~~~~~~~~v~~~~~s~-------~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~----~~~~~~~~~~ 236 (264)
..+..+..+..+..+.+.+ +|.++++.. .+.|...++...+.+....+ ...+..+.+.
T Consensus 252 ~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~ 331 (353)
T 2g8s_A 252 AKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTG 331 (353)
T ss_dssp CCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEEC
T ss_pred ccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEEC
Confidence 1122333344566677753 466666653 56777777765544333221 1244556666
Q ss_pred CCCCCEEEE-ecCCCeEEEEEc
Q 024676 237 PKLGNIFIA-GGEDMWVHVFDF 257 (264)
Q Consensus 237 ~~~~~~~~~-gs~d~~v~vwd~ 257 (264)
++ |.++++ -..++ +||.+
T Consensus 332 pd-G~lyv~td~~~g--~I~ri 350 (353)
T 2g8s_A 332 PD-GYLYVLTDESSG--ELLKV 350 (353)
T ss_dssp TT-SCEEEEECSTTE--EEEEE
T ss_pred CC-CcEEEEEeCCCC--EEEEE
Confidence 64 666664 33444 44443
No 342
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=79.62 E-value=52 Score=32.70 Aligned_cols=159 Identities=14% Similarity=0.122 Sum_probs=80.4
Q ss_pred eeEeccCCCCCeEEEEEeCCCCcEEEeCCCC-ceEEeeeCC----cCCEEEEEECCCCcEEE-Ee------cCCCeEEEE
Q 024676 21 DLFYSPITPDGFFLVSASKDSSPMLRNGETG-DWIGTFEGH----KGAVWSCCLDANALFSA-SG------SADFTAKLW 88 (264)
Q Consensus 21 ~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~-~~~~~~~~H----~~~V~~v~~~~~~~~l~-s~------s~D~~v~iw 88 (264)
-+.|..+++.---||| +..|.-|++... .+++-|..| ...|..-..+++.++++ +| .-.|.+.+|
T Consensus 108 VvfWkWis~~~l~lVT---~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLy 184 (1630)
T 1xi4_A 108 VTFWKWISLNTVALVT---DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLY 184 (1630)
T ss_pred ceEEEecCCCeeEEEc---CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeee
Confidence 4688888776555555 345888999643 344555555 35666667788887753 33 244788888
Q ss_pred eCCCCcEEEEeecCCeEEEEEE--CCCC-CEEEEee---CCCcEEEeeCCCC-C--CCCe-----EeccC----CCCeEE
Q 024676 89 DALTGDEKHSFEHKHIVRACAF--SEDT-HLLLTGG---FEKILRIFDLNRP-D--APPR-----EVGNS----SGSIRT 150 (264)
Q Consensus 89 d~~~~~~~~~~~~~~~v~~~~~--~~~~-~~l~s~~---~d~~i~~~d~~~~-~--~~~~-----~~~~~----~~~i~~ 150 (264)
.+..+.....-.|......... .+.. +++.-+. ..+++++-++..+ . .... ...+. ..+ ..
T Consensus 185 S~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfp-v~ 263 (1630)
T 1xi4_A 185 SVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFP-VA 263 (1630)
T ss_pred ecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcc-eE
Confidence 7755432111112111100000 1111 1111111 1267888887543 1 0000 00111 112 23
Q ss_pred EEEecCCCeEEEEeeCCCeEEEEECCCCceeEEe
Q 024676 151 VAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTL 184 (264)
Q Consensus 151 ~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~ 184 (264)
+..++..+.+.+. +.-|.|.++|+.|+.++..-
T Consensus 264 ~~vs~k~g~iy~i-tk~G~~~~~d~~t~~~i~~~ 296 (1630)
T 1xi4_A 264 MQISEKHDVVFLI-TKYGYIHLYDLETGTCIYMN 296 (1630)
T ss_pred EEeccccCEEEEE-ecCceEEEEecccchhhhhc
Confidence 3344444444333 35599999999999987533
No 343
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=76.92 E-value=14 Score=33.47 Aligned_cols=62 Identities=16% Similarity=0.334 Sum_probs=38.4
Q ss_pred CCcEEEEeCCCcEEEEECCCceeeeEEecCCCC--ceeeEcC---C------CCCEEEEec--CCCeEEEEEcCc
Q 024676 198 DGRYITTADGSSVKFWDANHFGLVKGYNMPCNT--ESASLEP---K------LGNIFIAGG--EDMWVHVFDFHT 259 (264)
Q Consensus 198 ~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~---~------~~~~~~~gs--~d~~v~vwd~~~ 259 (264)
+..+++-+.|.++|+|+++++.++........+ ......+ + .+.++++-+ .+|..++|.+..
T Consensus 231 ~~fLftL~~Dh~LRiWsL~t~~lv~t~DL~~~~~~~~s~L~~~~~~~~~Lrl~~~~lv~y~P~~~G~Fk~~~l~~ 305 (729)
T 3f7f_A 231 ERYLIVLTQNCHLKIWDLTSFTLIQDYDMVSQSDSDPSHFRKVEAVGEYLSLYNNTLVTLLPLENGLFQMGTLLV 305 (729)
T ss_dssp TTEEEEEETTCEEEEEETTTTEEEEEEETTTTSCCCSSCCCCCCSCCCCEEESSSEEEEEETTTTCEEEEEEEEC
T ss_pred CcEEEEEEcCCeEEEEEcCCCceEEeeccccCccccccccCcccCcchhHhheeeEEEEEecCCCCeEEEEEEEE
Confidence 433456678999999999999999888874332 0000111 1 134555433 567888898743
No 344
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=70.24 E-value=3.7 Score=39.38 Aligned_cols=37 Identities=19% Similarity=0.085 Sum_probs=30.5
Q ss_pred EEEEEECCCCcEEEEecCCCeEEEEeCCCCcEEEEee
Q 024676 64 VWSCCLDANALFSASGSADFTAKLWDALTGDEKHSFE 100 (264)
Q Consensus 64 V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~ 100 (264)
+.+++..++..++.|-+.|+++|||++.++.++.+..
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 3445566788899999999999999999998877754
No 345
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=66.34 E-value=87 Score=29.39 Aligned_cols=39 Identities=10% Similarity=0.007 Sum_probs=31.1
Q ss_pred CEEEEEEcCCCcEE-EEeCCCcEEEEECCCceeeeEEecC
Q 024676 189 PVTSAEVSRDGRYI-TTADGSSVKFWDANHFGLVKGYNMP 227 (264)
Q Consensus 189 ~v~~~~~s~~~~~l-~~~~~~~i~iwd~~~~~~~~~~~~~ 227 (264)
.+.++...++..++ +.+.|+++|+|++.++.++.+..+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~ 276 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELS 276 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeeccc
Confidence 35667777777775 5678999999999999999888753
No 346
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=65.95 E-value=11 Score=33.99 Aligned_cols=30 Identities=10% Similarity=0.213 Sum_probs=25.6
Q ss_pred CCcEEEEecCCCeEEEEeCCCCcEEEEeec
Q 024676 72 NALFSASGSADFTAKLWDALTGDEKHSFEH 101 (264)
Q Consensus 72 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~ 101 (264)
+..++++-+.|+++|+|++.++.++.+...
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 467999999999999999999987776643
No 347
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=65.72 E-value=62 Score=27.47 Aligned_cols=102 Identities=17% Similarity=0.128 Sum_probs=56.9
Q ss_pred CeeeeEeccCCCCCe-EEEEEeCCCCcEEEeCCCC---ceEEeee-----C----CcCCEEEEEECCC----CcEEEEec
Q 024676 18 PVVDLFYSPITPDGF-FLVSASKDSSPMLRNGETG---DWIGTFE-----G----HKGAVWSCCLDAN----ALFSASGS 80 (264)
Q Consensus 18 ~v~~~~~~~~~~~g~-~l~t~s~d~~v~i~~~~~~---~~~~~~~-----~----H~~~V~~v~~~~~----~~~l~s~s 80 (264)
.-++|+|.| ||. .|+.+.+.|.|++++.... +.+..+. + -.+....|+|+|+ +.+.++-+
T Consensus 15 ~P~~~a~~p---dG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt 91 (463)
T 2wg3_C 15 QPVGALHSG---DGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYT 91 (463)
T ss_dssp SEEEEECCS---SSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEE
T ss_pred CceEEEECC---CCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEe
Confidence 345788886 775 3455678899999865422 1122221 1 1456788999996 44333322
Q ss_pred --CC--------CeEEE--EeCCC----------CcEEEEee---cCCeEEEEEECCCCCEEEEeeC
Q 024676 81 --AD--------FTAKL--WDALT----------GDEKHSFE---HKHIVRACAFSEDTHLLLTGGF 122 (264)
Q Consensus 81 --~D--------~~v~i--wd~~~----------~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~ 122 (264)
.+ ...+| |.... .+.+.... ..+.-..+.|.|++++.++.+.
T Consensus 92 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 92 TNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp ECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 11 11233 44432 12222222 2345778999999988887654
No 348
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=55.06 E-value=95 Score=26.16 Aligned_cols=102 Identities=12% Similarity=0.169 Sum_probs=57.7
Q ss_pred CCeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCce--EEeeeC------CcCCEEEEEECCC----CcEEEEecC---
Q 024676 17 RPVVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDW--IGTFEG------HKGAVWSCCLDAN----ALFSASGSA--- 81 (264)
Q Consensus 17 ~~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~--~~~~~~------H~~~V~~v~~~~~----~~~l~s~s~--- 81 (264)
...++|+|.| +|+++++-...+.|++++..+++. +..+.. -.+....|+|+|+ +.+.++-+.
T Consensus 27 ~~P~~~a~~p---dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~ 103 (454)
T 1cru_A 27 NKPHALLWGP---DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNP 103 (454)
T ss_dssp SSEEEEEECT---TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECT
T ss_pred CCceEEEEcC---CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEecccc
Confidence 3456899986 898776643334577777655543 223321 2456778999994 444444332
Q ss_pred ---------CCeEEEEeCCCC--c-----EEEE-ee--cCCeEEEEEECCCCCEEEEee
Q 024676 82 ---------DFTAKLWDALTG--D-----EKHS-FE--HKHIVRACAFSEDTHLLLTGG 121 (264)
Q Consensus 82 ---------D~~v~iwd~~~~--~-----~~~~-~~--~~~~v~~~~~~~~~~~l~s~~ 121 (264)
...|.-++...+ . .+.. +. ..+....+.|.|++++.++.+
T Consensus 104 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 104 KSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp TC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 123444443221 1 1111 21 234578899999999888754
No 349
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=53.73 E-value=86 Score=25.24 Aligned_cols=68 Identities=15% Similarity=0.268 Sum_probs=40.6
Q ss_pred CeEEEEEecC------CCeEEEEeeCCCeEEEEECCCCceeEE--e--cCCCCEEEEEEcCCCcEEEEeCCCcEEEEE
Q 024676 147 SIRTVAWLHS------DQTILSSCTDSGGVRLWDARSGKIVQT--L--ETKSPVTSAEVSRDGRYITTADGSSVKFWD 214 (264)
Q Consensus 147 ~i~~~~~~~~------~~~~~~~~~~d~~v~iwd~~~~~~~~~--~--~~~~~v~~~~~s~~~~~l~~~~~~~i~iwd 214 (264)
....+.+... .+.++++....+.|...+++.++.+.. + .....+..+++.|||.++++.++..=+||.
T Consensus 272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~I~r 349 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGELLK 349 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEEEEE
T ss_pred CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCEEEE
Confidence 3455666432 245666666667888888876654322 2 123468899999999876655432233443
No 350
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=50.20 E-value=16 Score=35.02 Aligned_cols=29 Identities=21% Similarity=0.045 Sum_probs=25.5
Q ss_pred CCCeEEEEEeCCCCcEEEeCCCCceEEee
Q 024676 29 PDGFFLVSASKDSSPMLRNGETGDWIGTF 57 (264)
Q Consensus 29 ~~g~~l~t~s~d~~v~i~~~~~~~~~~~~ 57 (264)
++..+|++-+.|+.+|||++.+++++++.
T Consensus 247 ~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 247 STYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp TTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred CCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 46779999999999999999999987664
No 351
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=49.84 E-value=99 Score=24.81 Aligned_cols=103 Identities=13% Similarity=-0.007 Sum_probs=61.7
Q ss_pred CCCeEEEEEeCCCCcEEEeCCCCc-----eE--EeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCC--CC------
Q 024676 29 PDGFFLVSASKDSSPMLRNGETGD-----WI--GTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDAL--TG------ 93 (264)
Q Consensus 29 ~~g~~l~t~s~d~~v~i~~~~~~~-----~~--~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~--~~------ 93 (264)
++..+++..+.+|.++...+.... -+ -.++. .+.+..+........++-.+..|.+..+... .-
T Consensus 107 ~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~ 185 (327)
T 3uc1_A 107 TDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRA 185 (327)
T ss_dssp TSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTT
T ss_pred CCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcC
Confidence 356789999999999887653311 11 12333 3445444444444555556667777777665 21
Q ss_pred ---cEEEEeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCC
Q 024676 94 ---DEKHSFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLN 132 (264)
Q Consensus 94 ---~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~ 132 (264)
.....+.....|..+...+.+..++..+..|.++.-.+.
T Consensus 186 a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 186 TSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp SBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred CCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 111223344556666665666678888999998887653
No 352
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=46.60 E-value=1e+02 Score=23.97 Aligned_cols=217 Identities=11% Similarity=0.008 Sum_probs=107.4
Q ss_pred CeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCC-CceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEE
Q 024676 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGET-GDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEK 96 (264)
Q Consensus 18 ~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~-~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~ 96 (264)
.|..|+.. ....++. . |+.+..|-... +++ ..-..-...|..++-......++ . |+.|..|-......+
T Consensus 25 ~i~~ia~G----~~h~~~l-~-~G~v~~wG~n~~Gql-g~p~~~~~~i~~ia~G~~hs~~l--~-~G~v~~wG~n~~Gql 94 (282)
T 3qhy_B 25 GVDAIAGG----YFHGLAL-K-GGKVLGWGANLNGQL-TMPAATQSGVDAIAAGNYHSLAL--K-DGEVIAWGGNEDGQT 94 (282)
T ss_dssp SCCEEEEC----SSEEEEE-E-TTEEEEEECCSSSTT-SCCGGGGSCCCEEEECSSEEEEE--E-TTEEEEEECCTTSTT
T ss_pred CCcEEEeC----CCeEEEE-E-CCEEEEEeCCCCCCC-CCCccCCCCEEEEEeCCCEEEEE--E-CCEEEEeeCCCCCCC
Confidence 46666554 2233344 5 89999996543 221 10001123566666665555444 3 899999975442111
Q ss_pred EE-eecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEEC
Q 024676 97 HS-FEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDA 175 (264)
Q Consensus 97 ~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~ 175 (264)
-. .+....|..++.......++ . |+.+..|-.+........ ......+..++.- ..+.++. . |+.|..|-.
T Consensus 95 g~P~~~~~~v~~ia~G~~hs~al--~-~G~v~~wG~n~~gqlg~~-~~~~~~i~~i~~G--~~~~~~l-~-~G~v~~wG~ 166 (282)
T 3qhy_B 95 TVPAEARSGVDAIAAGAWASYAL--K-DGKVIAWGDDSDGQTTVP-AEAQSGVTALDGG--VYTALAV-K-NGGVIAWGD 166 (282)
T ss_dssp CCCGGGSSSEEEEEEETTEEEEE--E-TTEEEEEECCTTSTTSCC-GGGGSSEEEEEEC--SSEEEEE-E-TTEEEEEEC
T ss_pred CCCcccCCCeEEEECcCCEEEEE--e-CCeEEEecCCCCCcCCCC-ccCCCCeEEEEcc--cCEEEEE-E-CCEEEEecC
Confidence 11 11234577777666554444 3 899999976543221111 1122345555432 2233332 3 599999976
Q ss_pred CCC-ceeEEecCCCCEEEEEEcCCCcEEEEeCCCcEEEEECCCceeeeE-EecCCCCceeeEcCCCCCEEEEecCCCeEE
Q 024676 176 RSG-KIVQTLETKSPVTSAEVSRDGRYITTADGSSVKFWDANHFGLVKG-YNMPCNTESASLEPKLGNIFIAGGEDMWVH 253 (264)
Q Consensus 176 ~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~gs~d~~v~ 253 (264)
... +.-........+..++...+..++. .++.+..|=...+..+.. .........+.... .+.++.. |+.++
T Consensus 167 n~~gqlg~p~~~~~~v~~i~~G~~hs~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~--~h~~al~--~g~v~ 240 (282)
T 3qhy_B 167 NYFGQTTVPAEAQSGVDDVAGGIFHSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGE--WYSLALK--NGKVI 240 (282)
T ss_dssp CTTSTTSCCGGGGSSEEEEEECSSEEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECS--SCEEEEE--TTEEE
T ss_pred CCCCCCCCceecCCCeEEEEecCCEEEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCC--CEEEEEE--CCEEE
Confidence 542 2211112234577776655444433 578888886544322210 01111222333221 3334433 89999
Q ss_pred EEEcC
Q 024676 254 VFDFH 258 (264)
Q Consensus 254 vwd~~ 258 (264)
.|-..
T Consensus 241 ~wG~n 245 (282)
T 3qhy_B 241 AWGSS 245 (282)
T ss_dssp EESTT
T ss_pred EecCC
Confidence 99544
No 353
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=41.86 E-value=1.6e+02 Score=24.92 Aligned_cols=102 Identities=14% Similarity=0.101 Sum_probs=54.0
Q ss_pred EEEEEECCCCC-EEEEeeCCCcEEEeeCCCCC--CCCeEec---------cCCCCeEEEEEecC---CCeEEEEeeC--C
Q 024676 105 VRACAFSEDTH-LLLTGGFEKILRIFDLNRPD--APPREVG---------NSSGSIRTVAWLHS---DQTILSSCTD--S 167 (264)
Q Consensus 105 v~~~~~~~~~~-~l~s~~~d~~i~~~d~~~~~--~~~~~~~---------~~~~~i~~~~~~~~---~~~~~~~~~~--d 167 (264)
.+.+++.|++. .|+.+...+.|++++.+... .....+. ...+.+..+++.|+ ++.+.++-+. +
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~ 95 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE 95 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence 46778999985 45556678999999753221 1111111 01345677887764 3444444321 1
Q ss_pred ----------CeEEEEECCC----------CceeEEec---CCCCEEEEEEcCCCcEEEE-eC
Q 024676 168 ----------GGVRLWDARS----------GKIVQTLE---TKSPVTSAEVSRDGRYITT-AD 206 (264)
Q Consensus 168 ----------~~v~iwd~~~----------~~~~~~~~---~~~~v~~~~~s~~~~~l~~-~~ 206 (264)
..|.-|.+.. .+.+..+. .......+.|.|||.+.++ ++
T Consensus 96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1233355432 12333332 1234778999999976544 44
No 354
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=41.79 E-value=1.3e+02 Score=23.73 Aligned_cols=138 Identities=9% Similarity=-0.037 Sum_probs=72.1
Q ss_pred EECCCCcEEEEecC--------------CCeEEEEeCCCCcEEEEeecCCeEEEEEECCCCCEEEEee----CCCcEEEe
Q 024676 68 CLDANALFSASGSA--------------DFTAKLWDALTGDEKHSFEHKHIVRACAFSEDTHLLLTGG----FEKILRIF 129 (264)
Q Consensus 68 ~~~~~~~~l~s~s~--------------D~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~----~d~~i~~~ 129 (264)
-+++++.+++-.+. ...|+..++..++...... .+.. .+++.++.|+-.. ....|..-
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~--~~~~--~~s~~g~~Iy~~~~~~~~~~~Iy~~ 134 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDP--DPCI--YASLIGNYIYYLHYDTQTATSLYRI 134 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEEC--SCEE--EEEEETTEEEEEEESSSSCEEEEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeec--CCcc--EEEEeCCEEEEEeecCCCCceEEEE
Confidence 34567776654432 2356666766654322221 2222 4667777777655 23445555
Q ss_pred eCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEECCCCceeEEecCCCCEEEEEEcCCCcEEEEeC-C-
Q 024676 130 DLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDARSGKIVQTLETKSPVTSAEVSRDGRYITTAD-G- 207 (264)
Q Consensus 130 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~- 207 (264)
+++... .+.+..+.. ..+.+.++.+.-+.....+|..-++..+.....+.. +.. ..++|++.+|.-.+ +
T Consensus 135 ~~dGs~--~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~--~~~-~~~~P~g~~iy~t~~~~ 205 (302)
T 3s25_A 135 RIDGEE--KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC--NCY-KPVVLDDTNVYYMDVNR 205 (302)
T ss_dssp ETTSCC--CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS--CEE-EEEEEETTEEEEEEGGG
T ss_pred ECCCCC--eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC--Ccc-ceeeecCCEEEEEEcCC
Confidence 665432 233333222 223456677766654457888888887665443332 332 23568887765432 2
Q ss_pred -CcEEEEECCCc
Q 024676 208 -SSVKFWDANHF 218 (264)
Q Consensus 208 -~~i~iwd~~~~ 218 (264)
..|..-++...
T Consensus 206 ~~~I~~~~ldG~ 217 (302)
T 3s25_A 206 DNAIVHVNINNP 217 (302)
T ss_dssp TTEEEEECSSSC
T ss_pred CcEEEEEECCCC
Confidence 34555555443
No 355
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=41.05 E-value=1.7e+02 Score=25.76 Aligned_cols=56 Identities=20% Similarity=0.118 Sum_probs=36.5
Q ss_pred EEEEECCCCcEEEEecCC----------C--eEEEEeCCCCcEEEEe--ecCCeEEEEEECCCCCEEEEe
Q 024676 65 WSCCLDANALFSASGSAD----------F--TAKLWDALTGDEKHSF--EHKHIVRACAFSEDTHLLLTG 120 (264)
Q Consensus 65 ~~v~~~~~~~~l~s~s~D----------~--~v~iwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~ 120 (264)
=.|+|++.+.+++.-..+ + .+.+.+..+++..+.+ +....++.++|+|+++.|+..
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 348899998876543221 1 2334455566654444 345689999999999988764
No 356
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=34.53 E-value=1.9e+02 Score=23.65 Aligned_cols=193 Identities=9% Similarity=0.087 Sum_probs=108.7
Q ss_pred CCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcE-EEEecCCCeEEEEeCCC-CcEEEEee-c----C
Q 024676 30 DGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALF-SASGSADFTAKLWDALT-GDEKHSFE-H----K 102 (264)
Q Consensus 30 ~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~-l~s~s~D~~v~iwd~~~-~~~~~~~~-~----~ 102 (264)
..+.+|.-. -.+++|+|+++.+.++.+.-.+ .|..=.|-.+..+ ++| +..|.-|++.. ..+...++ | .
T Consensus 77 ~~~ViALra-g~~LQiFnletK~klks~~~~e-~VvfWkWis~~~L~lVT---~taVyHWs~~~~s~P~kvFdR~~~L~~ 151 (365)
T 2xzh_A 77 ASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTVALVT---DNAVYHWSMEGESQPVKMFDRHSSLAG 151 (365)
T ss_dssp SSSEEEEEE-TTEEEEEETTTTEEEEEEECSS-CEEEEEECSSSEEEEEE---SSEEEEEESSTTCCCEEEEECCGGGTT
T ss_pred CccEEEEec-CCeEEEechHHhhhhcceecCC-ccEEEEecCCCeEEEEc---CCcEEEEcccCCCCCceeeecchhccc
Confidence 345555554 5679999999998777776554 5555667665555 455 45799999874 34555554 2 2
Q ss_pred CeEEEEEECCCCCEEEEee-------CCCcEEEeeCCCCCCCCeEeccCCCCeEEEEE--ecCCCeEEEEeeC---CCeE
Q 024676 103 HIVRACAFSEDTHLLLTGG-------FEKILRIFDLNRPDAPPREVGNSSGSIRTVAW--LHSDQTILSSCTD---SGGV 170 (264)
Q Consensus 103 ~~v~~~~~~~~~~~l~s~~-------~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~---d~~v 170 (264)
.-|.....+++.+.++..+ -.|.+.+|..+.. ..+.+..|.+.-..+.. .+....+++-+.. .+++
T Consensus 152 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~--~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kL 229 (365)
T 2xzh_A 152 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK--VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKL 229 (365)
T ss_dssp CEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT--EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEE
T ss_pred ceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc--ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEE
Confidence 3466677788888877543 2355778877543 22333333222111110 0111123332221 2578
Q ss_pred EEEECCCC---c------eeEEe-cC---CCCEEEEEEcCCCcE-EEEeCCCcEEEEECCCceeeeEEecCCC
Q 024676 171 RLWDARSG---K------IVQTL-ET---KSPVTSAEVSRDGRY-ITTADGSSVKFWDANHFGLVKGYNMPCN 229 (264)
Q Consensus 171 ~iwd~~~~---~------~~~~~-~~---~~~v~~~~~s~~~~~-l~~~~~~~i~iwd~~~~~~~~~~~~~~~ 229 (264)
+|-++... . .+..+ .. ..-.-++.+|+-..+ .....-|.+++||++++.++-.-.+...
T Consensus 230 hIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d 302 (365)
T 2xzh_A 230 HIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGE 302 (365)
T ss_dssp EEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred EEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCC
Confidence 88887432 1 11111 11 122445666665443 3445568999999999998876666433
No 357
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=33.79 E-value=1.2e+02 Score=26.74 Aligned_cols=61 Identities=10% Similarity=0.104 Sum_probs=36.3
Q ss_pred EEEEEECCCCCEEEEeeCC------------CcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEee
Q 024676 105 VRACAFSEDTHLLLTGGFE------------KILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCT 165 (264)
Q Consensus 105 v~~~~~~~~~~~l~s~~~d------------~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 165 (264)
.--|.|+|.+.+++.--.+ +.+.+.+..+++.......+..+++..++|+|++..+++...
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvniQ 550 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEEE
Confidence 3568899999877653221 223444444444332233445667888888887777666544
No 358
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=32.07 E-value=2.6e+02 Score=24.59 Aligned_cols=59 Identities=17% Similarity=0.095 Sum_probs=38.9
Q ss_pred CEEEEEECCCCcEEE-EecC-----------CCeEEEEeCCCCcEEEEee--cCCeEEEEEECCCCCEEEEee
Q 024676 63 AVWSCCLDANALFSA-SGSA-----------DFTAKLWDALTGDEKHSFE--HKHIVRACAFSEDTHLLLTGG 121 (264)
Q Consensus 63 ~V~~v~~~~~~~~l~-s~s~-----------D~~v~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~ 121 (264)
.-..|.|+++|.+.+ |=.. ...|...+..+++....+. ....++.++|+|+++.|+..-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 345688999887655 4221 1145555666676555443 235789999999999998764
No 359
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=30.75 E-value=2.9e+02 Score=24.67 Aligned_cols=230 Identities=11% Similarity=0.056 Sum_probs=117.6
Q ss_pred eeeeEeccCCCCCeEEEEEeCCCCcEEEeCCCCceEEeee-------CCcCCEEEEEECCCCcEEEEecCCCeEEEEeCC
Q 024676 19 VVDLFYSPITPDGFFLVSASKDSSPMLRNGETGDWIGTFE-------GHKGAVWSCCLDANALFSASGSADFTAKLWDAL 91 (264)
Q Consensus 19 v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~-------~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~ 91 (264)
|.+|.-. .+|.+.+ |+.. -+.+++..++++..... .....|+++..+.++.+-+.. ..| +.+....
T Consensus 234 i~~i~~d---~~g~lWi-gT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT-~~G-l~~~~~~ 306 (758)
T 3ott_A 234 IKSLALD---GNGDLLA-GTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGT-DYG-ISLSRYN 306 (758)
T ss_dssp EEEEEEC---TTCCEEE-EETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEE-SSS-EEEECCC
T ss_pred EEEEEEc---CCCCEEE-EeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEe-CCc-ccccccC
Confidence 5555444 2555443 3433 46677776655432111 123468999888877654332 346 4444322
Q ss_pred CCcEEEEee------cCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCC-CCeEec-------cCCCCeEEEEEecCC
Q 024676 92 TGDEKHSFE------HKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDA-PPREVG-------NSSGSIRTVAWLHSD 157 (264)
Q Consensus 92 ~~~~~~~~~------~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~-~~~~~~-------~~~~~i~~~~~~~~~ 157 (264)
......... ....|.++..+.++.+.+. +.+| +..++..++.. ...... -....+.++..-+++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiG-t~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g 384 (758)
T 3ott_A 307 SALQFIPISQITGTGDGNQFYSLFRDSKGFYWFG-GANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQ 384 (758)
T ss_dssp C-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEE-ETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTS
T ss_pred CceeEEecccCCCCCCCceEEEEEEcCCCCEEEe-eCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCC
Confidence 111111110 1246888888888887664 4444 55555443211 111111 012246666543333
Q ss_pred CeEEEEeeCCCeEEEEECCCCceeEEe--c-----CCCCEEEEEEcCCCcEEEEeCCCcEEEEECCCc-----eee---e
Q 024676 158 QTILSSCTDSGGVRLWDARSGKIVQTL--E-----TKSPVTSAEVSRDGRYITTADGSSVKFWDANHF-----GLV---K 222 (264)
Q Consensus 158 ~~~~~~~~~d~~v~iwd~~~~~~~~~~--~-----~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~-----~~~---~ 222 (264)
.+-+ +.. +.|..+|.++++...-. . ....|.++...++|.+.++..++.+.++|..+. ... .
T Consensus 385 -~lWi-gt~-~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~ 461 (758)
T 3ott_A 385 -QLWI-ATD-GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQSTSGQYIAEQ 461 (758)
T ss_dssp -CEEE-EET-TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEESSSCEEEEEHHHHHHCCSSEEECSE
T ss_pred -CEEE-EeC-CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEECCCceEEEccccccccCCcceeccc
Confidence 3333 344 67999999887654321 1 123588888888888877776667888886431 111 2
Q ss_pred EEecC----CC-CceeeEcCCCCCEEEEecCCCeEEEEEcCcce
Q 024676 223 GYNMP----CN-TESASLEPKLGNIFIAGGEDMWVHVFDFHTGE 261 (264)
Q Consensus 223 ~~~~~----~~-~~~~~~~~~~~~~~~~gs~d~~v~vwd~~~g~ 261 (264)
.+... .. ...+...+ .|.+-+.++..+-+..+|..+++
T Consensus 462 ~~~~~~~l~~~~i~~i~~d~-~g~lWi~~~t~~Gl~~~d~~~~~ 504 (758)
T 3ott_A 462 NYSVHNGLSGMFINQIIPDN-EGNVWVLLYNNKGIDKINPRTRE 504 (758)
T ss_dssp EECGGGTCSCSCEEEEEECT-TSCEEEEETTCSSEEEEETTTTE
T ss_pred ccccccccccceeeeEEEcC-CCCEEEEccCCCCcEEEeCCCCc
Confidence 22211 11 22233333 36655533444457778876654
No 360
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=30.50 E-value=1.9e+02 Score=22.37 Aligned_cols=181 Identities=15% Similarity=0.058 Sum_probs=91.6
Q ss_pred CeeeeEeccCCCCCeEEEEEeCCCCcEEEeCCC-CceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCCcEE
Q 024676 18 PVVDLFYSPITPDGFFLVSASKDSSPMLRNGET-GDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTGDEK 96 (264)
Q Consensus 18 ~v~~~~~~~~~~~g~~l~t~s~d~~v~i~~~~~-~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~~~~ 96 (264)
.|..|+.. ....++. . |+.+..|-... +++ ..-..-...|..++-......+++ |+.|..|-......+
T Consensus 64 ~i~~ia~G----~~hs~~l-~-~G~v~~wG~n~~Gql-g~P~~~~~~v~~ia~G~~hs~al~---~G~v~~wG~n~~gql 133 (282)
T 3qhy_B 64 GVDAIAAG----NYHSLAL-K-DGEVIAWGGNEDGQT-TVPAEARSGVDAIAAGAWASYALK---DGKVIAWGDDSDGQT 133 (282)
T ss_dssp CCCEEEEC----SSEEEEE-E-TTEEEEEECCTTSTT-CCCGGGSSSEEEEEEETTEEEEEE---TTEEEEEECCTTSTT
T ss_pred CEEEEEeC----CCEEEEE-E-CCEEEEeeCCCCCCC-CCCcccCCCeEEEECcCCEEEEEe---CCeEEEecCCCCCcC
Confidence 45555554 2233444 4 88888885543 221 100001236777776655555554 889999975442111
Q ss_pred E-EeecCCeEEEEEECCCCCEEEEeeCCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEeeCCCeEEEEEC
Q 024676 97 H-SFEHKHIVRACAFSEDTHLLLTGGFEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSCTDSGGVRLWDA 175 (264)
Q Consensus 97 ~-~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~v~iwd~ 175 (264)
- ..+....|..++......+++ . |+.+..|-.+........ ......+..++-- ..+.++. .+|.|..|-.
T Consensus 134 g~~~~~~~~i~~i~~G~~~~~~l--~-~G~v~~wG~n~~gqlg~p-~~~~~~v~~i~~G--~~hs~al--~~G~v~~wG~ 205 (282)
T 3qhy_B 134 TVPAEAQSGVTALDGGVYTALAV--K-NGGVIAWGDNYFGQTTVP-AEAQSGVDDVAGG--IFHSLAL--KDGKVIAWGD 205 (282)
T ss_dssp SCCGGGGSSEEEEEECSSEEEEE--E-TTEEEEEECCTTSTTSCC-GGGGSSEEEEEEC--SSEEEEE--ETTEEEEEEC
T ss_pred CCCccCCCCeEEEEcccCEEEEE--E-CCEEEEecCCCCCCCCCc-eecCCCeEEEEec--CCEEEEE--ECCeEEEEEC
Confidence 1 111234566666665544333 3 788988876542211111 1112345555432 2333433 4799999976
Q ss_pred CCCceeE-EecCCCCEEEEEEcCCCcEEEEeCCCcEEEEECCCc
Q 024676 176 RSGKIVQ-TLETKSPVTSAEVSRDGRYITTADGSSVKFWDANHF 218 (264)
Q Consensus 176 ~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~~~i~iwd~~~~ 218 (264)
...-++. ..+....|..++...+..++.. ++.+..|=....
T Consensus 206 n~~gqlg~p~~~~~~v~~i~~G~~h~~al~--~g~v~~wG~n~~ 247 (282)
T 3qhy_B 206 NRYKQTTVPTEALSGVSAIASGEWYSLALK--NGKVIAWGSSRT 247 (282)
T ss_dssp CTTSTTCCCGGGGSSCCEEEECSSCEEEEE--TTEEEEESTTCC
T ss_pred CCCCCCCCCcccCCCceEEEcCCCEEEEEE--CCEEEEecCCCC
Confidence 5432211 1122234666665554444444 778888865443
No 361
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=26.72 E-value=3e+02 Score=23.53 Aligned_cols=190 Identities=8% Similarity=0.090 Sum_probs=108.2
Q ss_pred CeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcE-EEEecCCCeEEEEeCCC-CcEEEEee-c----CC
Q 024676 31 GFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALF-SASGSADFTAKLWDALT-GDEKHSFE-H----KH 103 (264)
Q Consensus 31 g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~-l~s~s~D~~v~iwd~~~-~~~~~~~~-~----~~ 103 (264)
.+.+|.-. -.+++|+|+++.+.++.+.-.+..| .=.|-.+..+ ++| +..|.-|++.. ..+...++ | ..
T Consensus 77 ~~iiALra-g~~lQiFnle~K~klks~~~~e~Vv-fWkWis~~~l~lVT---~taVyHWsi~~~s~P~kvFdR~~~L~~~ 151 (494)
T 1bpo_A 77 SKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVT-FWKWISLNTVALVT---DNAVYHWSMEGESQPVKMFDRHSSLAGC 151 (494)
T ss_dssp SSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCC-EEEEEETTEEEEEC---SSEEEEEESSSSCCCEEEEECCGGGTTC
T ss_pred CcEEEEec-CCeEEEEchHHhhhhcceecCCCce-EEEecCCCeEEEEc---CCeeEEecccCCCCchhheecchhcccc
Confidence 34455444 5689999999988777776555444 4456555544 454 55799999864 33555553 2 23
Q ss_pred eEEEEEECCCCCEEEEee-------CCCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCC---CeEEEEeeC---CCeE
Q 024676 104 IVRACAFSEDTHLLLTGG-------FEKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSD---QTILSSCTD---SGGV 170 (264)
Q Consensus 104 ~v~~~~~~~~~~~l~s~~-------~d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~---d~~v 170 (264)
-|.....+++.+.++..+ -.|.+.+|..+.. ..+.+..|.+.-..+. .+.. ..+++-+.. .+++
T Consensus 152 QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~--~sQ~ieGhaa~F~~~~-~~g~~~~~~lf~fa~r~~~g~kL 228 (494)
T 1bpo_A 152 QIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK--VSQPIEGHAASFAQFK-MEGNAEESTLFCFAVRGQAGGKL 228 (494)
T ss_dssp EEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC--CEEEECCSEEEEEEEE-CTTCSSEEEEEEEEECSTTCCEE
T ss_pred eEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc--ccchheeeeeeeEEEe-cCCCCCCceEEEEEEecCCCcEE
Confidence 466777888888887543 2356778887643 2334434433222111 1111 123333222 2688
Q ss_pred EEEECCCC---c-----eeEEe--cC---CCCEEEEEEcCCCcE-EEEeCCCcEEEEECCCceeeeEEecCC
Q 024676 171 RLWDARSG---K-----IVQTL--ET---KSPVTSAEVSRDGRY-ITTADGSSVKFWDANHFGLVKGYNMPC 228 (264)
Q Consensus 171 ~iwd~~~~---~-----~~~~~--~~---~~~v~~~~~s~~~~~-l~~~~~~~i~iwd~~~~~~~~~~~~~~ 228 (264)
+|-++... . ....+ .. ..-..++.+|+...+ .....-|.+++||++++.++-.-.+..
T Consensus 229 hi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~ 300 (494)
T 1bpo_A 229 HIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG 300 (494)
T ss_dssp EEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred EEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccC
Confidence 88887432 1 11111 11 122446677766444 345566899999999999876666543
No 362
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=23.08 E-value=3.2e+02 Score=22.49 Aligned_cols=135 Identities=14% Similarity=0.145 Sum_probs=0.0
Q ss_pred cEEEeeCCCC--CCCCeEecc-----CCCCeEEEEEe---cC----CCeEEEEeeCCCeEEEEECCCCceeEEecCC---
Q 024676 125 ILRIFDLNRP--DAPPREVGN-----SSGSIRTVAWL---HS----DQTILSSCTDSGGVRLWDARSGKIVQTLETK--- 187 (264)
Q Consensus 125 ~i~~~d~~~~--~~~~~~~~~-----~~~~i~~~~~~---~~----~~~~~~~~~~d~~v~iwd~~~~~~~~~~~~~--- 187 (264)
+|-+||+.+. +.......+ ....+..+..- +. +....++-+....|-++|+++++.-+.....
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Q ss_pred ----------------CCEEEEEEcCC----CcEEEEeCCCcEEEEECCC-----------ceeeeEEecCCCCceeeEc
Q 024676 188 ----------------SPVTSAEVSRD----GRYITTADGSSVKFWDANH-----------FGLVKGYNMPCNTESASLE 236 (264)
Q Consensus 188 ----------------~~v~~~~~s~~----~~~l~~~~~~~i~iwd~~~-----------~~~~~~~~~~~~~~~~~~~ 236 (264)
..+..++++|+ ++.|--+--..-++|.+.+ .+.+..-............
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D 283 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYD 283 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEEC
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEe
Q ss_pred CCCCCEEEEecCCCeEEEEEcCc
Q 024676 237 PKLGNIFIAGGEDMWVHVFDFHT 259 (264)
Q Consensus 237 ~~~~~~~~~gs~d~~v~vwd~~~ 259 (264)
+..|.++++--+...|..|+..+
T Consensus 284 ~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 284 PKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp TTTCEEEEEESSSSEEEEEETTS
T ss_pred CCCCeEEEEeccCCeEEEEeCCC
No 363
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=22.85 E-value=2.8e+02 Score=21.72 Aligned_cols=101 Identities=7% Similarity=-0.038 Sum_probs=52.8
Q ss_pred ECCCCCEEEEeeC--------------CCcEEEeeCCCCCCCCeEeccCCCCeEEEEEecCCCeEEEEe---eCCCeEEE
Q 024676 110 FSEDTHLLLTGGF--------------EKILRIFDLNRPDAPPREVGNSSGSIRTVAWLHSDQTILSSC---TDSGGVRL 172 (264)
Q Consensus 110 ~~~~~~~l~s~~~--------------d~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~d~~v~i 172 (264)
++++++.|+-+.. +..|+..+++..+ ...+... .. ..+.+.++.+..+. .....|..
T Consensus 60 i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~--~~~l~~~--~~--~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 60 INADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHG--STVLDPD--PC--IYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCC--CEEEECS--CE--EEEEEETTEEEEEEESSSSCEEEEE
T ss_pred EEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCc--ceEeecC--Cc--cEEEEeCCEEEEEeecCCCCceEEE
Confidence 3566666665543 2457777776554 2333222 21 24455677766554 23346666
Q ss_pred EECCCCceeEEecCCCCEEEEEEcCCCcEEEEeC--CCcEEEEECCCcee
Q 024676 173 WDARSGKIVQTLETKSPVTSAEVSRDGRYITTAD--GSSVKFWDANHFGL 220 (264)
Q Consensus 173 wd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~~i~iwd~~~~~~ 220 (264)
-++............. ..++|+++.|.-.+ ...|..-++.....
T Consensus 134 ~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~ 179 (302)
T 3s25_A 134 IRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSE 179 (302)
T ss_dssp EETTSCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEE
T ss_pred EECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCE
Confidence 6776444333223222 34567776665433 35677777765543
No 364
>3ge2_A Lipoprotein, putative; beta-barrel, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.20A {Streptococcus pneumoniae}
Probab=21.88 E-value=1.9e+02 Score=19.47 Aligned_cols=62 Identities=19% Similarity=0.269 Sum_probs=40.0
Q ss_pred CCCeEEEEEeCCCCcEEEeCCCCceEEeeeCCcCCEEEEEECCCCcEEEEecCCCeEEEEeCCCC
Q 024676 29 PDGFFLVSASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDANALFSASGSADFTAKLWDALTG 93 (264)
Q Consensus 29 ~~g~~l~t~s~d~~v~i~~~~~~~~~~~~~~H~~~V~~v~~~~~~~~l~s~s~D~~v~iwd~~~~ 93 (264)
-||.|-..-..|....+....+|.+...=..-...|..|.|.+....+..|. | ++.|.++..
T Consensus 50 LDGTY~g~de~D~iTLvI~G~tGTwTe~E~DGdqEikqV~iD~~NQ~m~IGD-D--vk~Y~lnGn 111 (130)
T 3ge2_A 50 IDGTYTGQDDGDRITLVVTGTTGTWTELESDGDQKVKQVTFDSANQRMIIGD-D--VKIYTVNGN 111 (130)
T ss_dssp CCEEEEEEETTEEEEEEEETTEEEEEEECTTSCEEEEEEEEETTTTEEEETT-E--EEEEEEETT
T ss_pred cCceEEcccCCcEEEEEEeCCcceeEEEccCCCeeeEEEEEccCcCEEEecC-c--ceEEEecCC
Confidence 4777776655555555566666766544333345788899999988876653 3 666665544
Done!