BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 024677
(264 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q1ECE0|VAP41_ARATH Vesicle-associated protein 4-1 OS=Arabidopsis thaliana GN=PVA41
PE=2 SV=1
Length = 266
Score = 345 bits (884), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 190/266 (71%), Positives = 220/266 (82%), Gaps = 3/266 (1%)
Query: 1 MAIADWHSRSNSDKK-LFGFCPFWQTSTTATPSSSASSTQNLTTSSSNPHVGVPNSSRPA 59
M I D + S KK LF CPFWQ +T + SS+ + QN + N + + S+P
Sbjct: 1 MPIGDRQNPSVEKKKNLFRLCPFWQRRSTTSSSSTQNPNQNYRSRHGNRNTDISAVSKPP 60
Query: 60 TKTVSYVARSLLPPRRRLRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPK 119
T+S VARSLLP RRRLRLDPS+ LYFPYEPGKQ RSA++LKNTSKSH AFKFQTTAPK
Sbjct: 61 L-TMSSVARSLLPARRRLRLDPSSYLYFPYEPGKQVRSAIKLKNTSKSHTAFKFQTTAPK 119
Query: 120 SCYMRPPGGVLAPGDSIIATVFKFVEAPENNERQPLDQKSKDKFKIMSLKVKGGIDYVPE 179
SCYMRPPGGVLAPG+S+ ATVFKFVE PENNE+QPL+QKSK KFKIMSLKVK G++YVPE
Sbjct: 120 SCYMRPPGGVLAPGESVFATVFKFVEHPENNEKQPLNQKSKVKFKIMSLKVKPGVEYVPE 179
Query: 180 LFDEQKDQVTVERILRVVFLNAERPSPALEKLKLQLAEAEAALEARKRPPPDTGPRVVGE 239
LFDEQKDQV VE++LRV+F++A+RPS ALEKLK QL EAEAA+EARK+PPP+TGPRVVGE
Sbjct: 180 LFDEQKDQVAVEQVLRVIFIDADRPSAALEKLKRQLDEAEAAVEARKKPPPETGPRVVGE 239
Query: 240 GLVIDEW-ERREKYLARQQVEAVDSV 264
GLVIDEW ERREKYLARQQVE+VDS+
Sbjct: 240 GLVIDEWKERREKYLARQQVESVDSL 265
>sp|Q8VYN2|VAP42_ARATH Vesicle-associated protein 4-2 OS=Arabidopsis thaliana GN=PVA42
PE=1 SV=1
Length = 295
Score = 319 bits (818), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 153/204 (75%), Positives = 183/204 (89%), Gaps = 2/204 (0%)
Query: 62 TVSYVARSLLPPRRRLRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSC 121
+VS VA+S LP +RRL+LDPS LYFPYEPGKQ RSA+++KNTSKSHVAFKFQTTAPKSC
Sbjct: 93 SVSSVAKSFLPTKRRLKLDPSEKLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTAPKSC 152
Query: 122 YMRPPGGVLAPGDSIIATVFKFVEAPENNERQPLDQKSKDKFKIMSLKVKGGIDYVPELF 181
+MRPPG +LAPG++IIATVFKFVE PENNE+ P+DQ+S+ KFKIMSLKVKG +DYVPELF
Sbjct: 153 FMRPPGAILAPGETIIATVFKFVEPPENNEK-PMDQRSRVKFKIMSLKVKGPMDYVPELF 211
Query: 182 DEQKDQVTVERILRVVFLNAERPSPALEKLKLQLAEAEAALEARKRPPPDTGPRVVGEGL 241
DEQKD V+ E+ILRV+FL+ ER +PALEKLK QLAEA+AA+EARK+PP +TGP+++GEGL
Sbjct: 212 DEQKDDVSKEQILRVIFLDPERSNPALEKLKRQLAEADAAVEARKKPPEETGPKMIGEGL 271
Query: 242 VIDEW-ERREKYLARQQVEAVDSV 264
VIDEW ERRE+YLA+QQ E DSV
Sbjct: 272 VIDEWKERRERYLAQQQGEGADSV 295
>sp|Q8LPQ7|VAP43_ARATH Vesicle-associated protein 4-3 OS=Arabidopsis thaliana GN=PVA43
PE=2 SV=1
Length = 287
Score = 261 bits (667), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 136/198 (68%), Positives = 166/198 (83%), Gaps = 3/198 (1%)
Query: 62 TVSYVARSLLPPRRRLRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSC 121
++S VARSLLP +RRL+LDPS LYFPYEPGKQ RSA+++KNTSKSHVAFKFQTT PKSC
Sbjct: 85 SMSSVARSLLPTKRRLKLDPSAKLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTVPKSC 144
Query: 122 YMRPPGGVLAPGDSIIATVFKFVEAPENNERQPLDQKSKDKFKIMSLKVKGGIDYVPELF 181
+MRP G +LAPG+ IIATVFKFVE PENNE+ P++QKS KFKIMSLK+K DY+PELF
Sbjct: 145 FMRPAGAILAPGEEIIATVFKFVEPPENNEK-PMEQKSGVKFKIMSLKMKVPTDYMPELF 203
Query: 182 DEQKDQVTVERILRVVFLNAERPSPALEKLKLQLAEAEAALEARKRPPPD-TGPRVVGEG 240
+EQKD V+ E+++RVVFL+ E P+ +EKLK QLAEA+AA EARK+ GP+ +GEG
Sbjct: 204 EEQKDHVSEEQVMRVVFLDPENPNSMMEKLKSQLAEADAADEARKKASEGIVGPKPIGEG 263
Query: 241 LVIDEW-ERREKYLARQQ 257
LVIDEW +RRE+YLA+QQ
Sbjct: 264 LVIDEWKQRRERYLAQQQ 281
>sp|Q84WW5|VAP13_ARATH Vesicle-associated protein 1-3 OS=Arabidopsis thaliana GN=PVA13
PE=2 SV=1
Length = 239
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 73/129 (56%), Gaps = 9/129 (6%)
Query: 85 LYFPYEPGKQTRSAVRLKN-TSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVFKF 143
L FP+E KQ+ +++L N T+ VAFK +TT P+ +RP GV+ PGDS TV
Sbjct: 14 LKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVVLPGDSCNVTV--- 70
Query: 144 VEAPENNERQPLDQKSKDKFKIMSLKVKGGI---DYVPELFDEQKDQVTVERILRVVFLN 200
+ + PLD + KDKF + ++ V G + + E+F+++ +V + LRVV++
Sbjct: 71 --TMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDFKLRVVYIP 128
Query: 201 AERPSPALE 209
A PSP E
Sbjct: 129 ANPPSPVPE 137
>sp|Q9SHC8|VAP12_ARATH Vesicle-associated protein 1-2 OS=Arabidopsis thaliana GN=PVA12
PE=1 SV=1
Length = 239
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDS- 135
L +DP + L FP+E KQ ++ L N + ++VAFK +TT PK +RP GV+ P S
Sbjct: 6 LTIDPVD-LQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPRSSS 64
Query: 136 -IIATVFKFVEAPENNERQPLDQKSKDKFKIMSLKVKGGI---DYVPELFDEQKDQVTVE 191
++ T+ EA P D + KDKF + + G D E+F ++ E
Sbjct: 65 EVLVTMQAQKEA-------PADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEE 117
Query: 192 RILRVVFLNAER-PSPALE 209
LRVV++ R PSP E
Sbjct: 118 TKLRVVYVAPPRPPSPVRE 136
>sp|Q8VZ95|VAP11_ARATH Vesicle-associated protein 1-1 OS=Arabidopsis thaliana GN=PVA11
PE=1 SV=1
Length = 256
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 13/132 (9%)
Query: 84 NLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDS--IIATVF 141
+L FP+E KQ ++ L N + ++VAFK +TT PK +RP GV+ P + ++ T+
Sbjct: 29 DLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLPRSTCEVLVTMQ 88
Query: 142 KFVEAPENNERQPLDQKSKDKFKIMSLKVKGGI---DYVPELFDEQKDQVTVERILRVVF 198
EAP D + KDKF + + G+ + PE+F ++ E LRV +
Sbjct: 89 AQKEAPS-------DMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETKLRVTY 141
Query: 199 LNAER-PSPALE 209
+ R PSP E
Sbjct: 142 VAPPRPPSPVHE 153
>sp|Q9LVU1|VAP21_ARATH Vesicle-associated protein 2-1 OS=Arabidopsis thaliana GN=PVA21
PE=2 SV=1
Length = 220
Score = 55.1 bits (131), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
Query: 83 NNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVFK 142
+ L F +E KQ+ +++ N ++++VAFK +TT+PK ++RP GV+ P DS I V
Sbjct: 15 DELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTGVIQPWDSCIIRV-- 72
Query: 143 FVEAPENNERQPLDQKSKDKFKIMSLKV--KGGIDYVPE-LFDEQKDQVTVERILRVVFL 199
+ P D + KDKF + S V +D +P+ F + + E L+V ++
Sbjct: 73 ---TLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLTECKLKVSYI 129
>sp|B9DHD7|VAP22_ARATH Vesicle-associated protein 2-2 OS=Arabidopsis thaliana GN=PVA22
PE=1 SV=1
Length = 386
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 56/120 (46%), Gaps = 12/120 (10%)
Query: 85 LYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVF--K 142
L F + KQT V+L NT+ +VAFK +TT+PK +RP GV+AP + TV
Sbjct: 13 LQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVGVVAPKSTCEFTVIMQA 72
Query: 143 FVEAPENNERQPLDQKSKDKFKIMSLKVKGGI---DYVPELFDEQKDQVTVERILRVVFL 199
F E P D KDKF I S V D +F + + + E LRV +
Sbjct: 73 FKEPPP-------DMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGKHIEENKLRVTLV 125
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
Query: 84 NLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVFKF 143
++ FP E KQ ++ L N + ++VAFK QTT PK ++P GV+ P S V
Sbjct: 13 DIRFPIELNKQGSCSLNLTNKTDNYVAFKAQTTKPKMYCVKPSVGVVLPRSS--CEVLVV 70
Query: 144 VEAPENNERQPLDQKSKDKFKIMSLKVKGGI---DYVPELFDEQKDQVTVERILRVVFLN 200
++A + P D++ KDK V+ G + E+F ++ E I +++++
Sbjct: 71 MQAL---KEAPADRQCKDKLLFQCKVVEPGTMDKEVTSEMFSKEAGHRVEETIFKIIYVA 127
Query: 201 AERP-SPALEKLK 212
+P SP E L+
Sbjct: 128 PPQPQSPVQEGLE 140
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 24/185 (12%)
Query: 29 ATPSSSASSTQNLTTSSSNPHVGVPNSSRPATKTVSYVARSLLPPRRRLRLDPSNNLYFP 88
++PS+S S N + P VG+ + R + + L +DP + + FP
Sbjct: 143 SSPSASVSDKGNASEVFVGPSVGIVDLIRMSDEL--------------LIIDPVD-VQFP 187
Query: 89 YEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVFKFVEAPE 148
E K+ ++ L N ++++VAFK +TT K Y+RP GV+ P S V ++A
Sbjct: 188 IELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLPRSS--CEVLVIMQAL- 244
Query: 149 NNERQPLDQKSKDKFKIMSLKVK---GGIDYVPELFDEQKDQVTVERILRVVFLNAER-P 204
+ P D + +DK V+ D E+F ++ E L+V+++ + P
Sbjct: 245 --KEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRLKVMYVTPPQPP 302
Query: 205 SPALE 209
SP E
Sbjct: 303 SPVQE 307
>sp|Q9Z270|VAPA_RAT Vesicle-associated membrane protein-associated protein A OS=Rattus
norvegicus GN=Vapa PE=1 SV=3
Length = 249
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 22/144 (15%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L LDP ++L F + ++L+N S V FK +TTAP+ +RP GV+ PG +
Sbjct: 15 LVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGVIDPGSIV 74
Query: 137 IATVFKFVEAPENNERQPLD----QKSKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVER 192
+V QP D +KSK KF + ++ I + ++ E K ++
Sbjct: 75 TVSVM----------LQPFDYDPNEKSKHKFMVQTIFAPPNISDMEAVWKEAKPDELMDS 124
Query: 193 ILRVVF--------LNAERPSPAL 208
LR VF LN PS A+
Sbjct: 125 KLRCVFEMPNENDKLNDMEPSKAV 148
>sp|Q0VCY1|VAPA_BOVIN Vesicle-associated membrane protein-associated protein A OS=Bos
taurus GN=VAPA PE=2 SV=1
Length = 249
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 22/144 (15%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L LDP +L F + ++L+N S V FK +TTAP+ +RP G++ PG ++
Sbjct: 15 LVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGLTV 74
Query: 137 IATVFKFVEAPENNERQPLD----QKSKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVER 192
+V QP D +KSK KF + ++ I + ++ E K ++
Sbjct: 75 TVSVM----------LQPFDYDPNEKSKHKFMVQTIFAPPNISDMEAVWKEAKPDELMDS 124
Query: 193 ILRVVF--------LNAERPSPAL 208
LR VF LN PS A+
Sbjct: 125 KLRCVFEMPNENDKLNDMEPSKAV 148
>sp|Q9WV55|VAPA_MOUSE Vesicle-associated membrane protein-associated protein A OS=Mus
musculus GN=Vapa PE=1 SV=2
Length = 249
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 22/144 (15%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L LDP ++L F + ++L+N S V FK +TTAP+ +RP G++ PG +
Sbjct: 15 LVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSIV 74
Query: 137 IATVFKFVEAPENNERQPLD----QKSKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVER 192
+V QP D +KSK KF + ++ I + ++ E K ++
Sbjct: 75 TVSVM----------LQPFDYDPNEKSKHKFMVQTIFAPPNISDMEAVWKEAKPDELMDS 124
Query: 193 ILRVVF--------LNAERPSPAL 208
LR VF LN PS A+
Sbjct: 125 KLRCVFEMPNENDKLNDMEPSKAV 148
>sp|Q5R601|VAPA_PONAB Vesicle-associated membrane protein-associated protein A OS=Pongo
abelii GN=VAPA PE=2 SV=2
Length = 249
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 22/144 (15%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L LDP +L F + ++L+N S V FK +TTAP+ +RP G++ PG ++
Sbjct: 15 LVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTV 74
Query: 137 IATVFKFVEAPENNERQPLD----QKSKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVER 192
+V QP D +KSK KF + ++ + ++ E K ++
Sbjct: 75 TVSVM----------LQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDELMDS 124
Query: 193 ILRVVF--------LNAERPSPAL 208
LR VF LN PS A+
Sbjct: 125 KLRCVFEMPNENDKLNDMEPSKAV 148
>sp|Q9P0L0|VAPA_HUMAN Vesicle-associated membrane protein-associated protein A OS=Homo
sapiens GN=VAPA PE=1 SV=3
Length = 249
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 22/144 (15%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L LDP +L F + ++L+N S V FK +TTAP+ +RP G++ PG ++
Sbjct: 15 LVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTV 74
Query: 137 IATVFKFVEAPENNERQPLD----QKSKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVER 192
+V QP D +KSK KF + ++ + ++ E K ++
Sbjct: 75 TVSVM----------LQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDELMDS 124
Query: 193 ILRVVF--------LNAERPSPAL 208
LR VF LN PS A+
Sbjct: 125 KLRCVFEMPNENDKLNDMEPSKAV 148
>sp|O82213|VAP31_ARATH Vesicle-associated protein 3-1 OS=Arabidopsis thaliana GN=PVA31
PE=3 SV=1
Length = 149
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 85 LYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVFKFV 144
L FP+E KQ ++ L N + ++VAFK +TT + +RP G++ P + K +
Sbjct: 14 LQFPFELKKQMSCSLYLTNKTDNNVAFKVKTTNRNNYCVRPNYGLILPKSTC-----KVL 68
Query: 145 EAPENNERQPLDQKSKDKFKIMSLKVKGGI---DYVPELFDEQKDQVTVERILRVVFL 199
+ + P D +S +KF I S+ G+ + E+F ++ V E LRV ++
Sbjct: 69 VTMQAQKEVPSDMQSFEKFMIQSVLASPGVTAKEVTREMFSKESGHVVEETKLRVTYV 126
>sp|Q10484|YDFC_SCHPO Uncharacterized protein C17C9.12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC17C9.12 PE=1 SV=2
Length = 319
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
+ L+ + + FP + + + L+NT+ + FK +TTAPK +RP GG + ++
Sbjct: 1 MALECDSTIVFPRPLTRLVKCDLELRNTAPYPIGFKVKTTAPKQYCVRPNGGRIEANSAV 60
Query: 137 IATVFKFVEAPENNERQPLDQ------KSKDKFKIMSLKVK---GGIDYVPELFDEQKDQ 187
V QPLD K +DKF + S ++K G+D + +++ +
Sbjct: 61 SVEVI----------LQPLDHEPAPGTKCRDKFLVQSTELKPELQGMD-IADIWTQVSKA 109
Query: 188 VTVERILRVVFLNAERPSPA 207
ER +R V+ +E PS A
Sbjct: 110 NISERKIRCVY--SEGPSTA 127
>sp|A2VDZ9|VAPB_BOVIN Vesicle-associated membrane protein-associated protein B OS=Bos
taurus GN=VAPB PE=2 SV=1
Length = 243
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 15/135 (11%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L L+P + L F + ++L N + +V FK +TTAP+ +RP G++ G SI
Sbjct: 8 LSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASI 67
Query: 137 IATVFKFVEAPENNERQPLD----QKSKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVER 192
+V QP D +KSK KF + S+ + ++ E K + ++
Sbjct: 68 NVSVM----------LQPFDYDPNEKSKHKFMVQSMFAPTDTSDMEAVWKEAKPEDLMDS 117
Query: 193 ILRVVF-LNAERPSP 206
LR VF L AE P
Sbjct: 118 KLRCVFELPAENDKP 132
>sp|A5GFS8|VAPB_PIG Vesicle-associated membrane protein-associated protein B OS=Sus
scrofa GN=VAPB PE=3 SV=1
Length = 243
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L L+P + L F + ++L N + +V FK +TTAP+ +RP G++ G SI
Sbjct: 8 LSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASI 67
Query: 137 IATVFKFVEAPENNERQPLD----QKSKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVER 192
+V QP D +KSK KF + S+ + + E K + ++
Sbjct: 68 NVSVM----------LQPFDYDPNEKSKHKFMVQSMFAPADTSDMEAAWKEAKPEDLMDS 117
Query: 193 ILRVVF-LNAERPSP 206
LR VF L AE P
Sbjct: 118 KLRCVFELPAENDKP 132
>sp|O95292|VAPB_HUMAN Vesicle-associated membrane protein-associated protein B/C OS=Homo
sapiens GN=VAPB PE=1 SV=3
Length = 243
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 15/135 (11%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L L+P + L F + ++L N + +V FK +TTAP+ +RP G++ G SI
Sbjct: 8 LSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASI 67
Query: 137 IATVFKFVEAPENNERQPLD----QKSKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVER 192
+V QP D +KSK KF + S+ + ++ E K + ++
Sbjct: 68 NVSVM----------LQPFDYDPNEKSKHKFMVQSMFAPTDTSDMEAVWKEAKPEDLMDS 117
Query: 193 ILRVVF-LNAERPSP 206
LR VF L AE P
Sbjct: 118 KLRCVFELPAENDKP 132
>sp|Q9Z269|VAPB_RAT Vesicle-associated membrane protein-associated protein B OS=Rattus
norvegicus GN=Vapb PE=1 SV=3
Length = 243
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 15/135 (11%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L L+P + L F + ++L N + +V FK +TTAP+ +RP GV+ G S+
Sbjct: 8 LSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGVIDAGASL 67
Query: 137 IATVFKFVEAPENNERQPLD----QKSKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVER 192
+V QP D +KSK KF + S+ + ++ E K + ++
Sbjct: 68 NVSVM----------LQPFDYDPNEKSKHKFMVQSMFAPPDTSDMEAVWKEAKPEDLMDS 117
Query: 193 ILRVVF-LNAERPSP 206
LR VF L AE P
Sbjct: 118 KLRCVFELPAENAKP 132
>sp|Q6Q595|SCS22_YEAST Vesicle-associated membrane protein-associated protein SCS22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SCS22 PE=1 SV=2
Length = 175
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 12/126 (9%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
+R+ P L F KQ+ ++L+N + V FK +T+AP +RP ++ +S+
Sbjct: 1 MRIVPEK-LVFKAPLNKQSTEYIKLENDGEKRVIFKVRTSAPTKYCVRPNVAIIGAHESV 59
Query: 137 IATVFKFVEAPENNERQPLDQKSKDKFKIMSLKVKGGIDYV---------PELFDEQKDQ 187
+ F+ P++ +DQK +DKF I++L + V P L ++ KD
Sbjct: 60 NVQIV-FLGLPKSTADDEMDQK-RDKFLIVTLPIPAAYQNVEDGELLSDWPNLEEQYKDD 117
Query: 188 VTVERI 193
+ ++I
Sbjct: 118 IVFKKI 123
>sp|P40075|SCS2_YEAST Vesicle-associated membrane protein-associated protein SCS2
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SCS2 PE=1 SV=3
Length = 244
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 93 KQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI-IATVFKFVEAPENNE 151
+Q+ + N S +AFK +TTAPK +RP V+APG++I + +F + E
Sbjct: 19 EQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQVQVIFLGL-----TE 73
Query: 152 RQPLDQKSKDKFKIMSL 168
D K +DKF +++L
Sbjct: 74 EPAADFKCRDKFLVITL 90
>sp|Q9QY76|VAPB_MOUSE Vesicle-associated membrane protein-associated protein B OS=Mus
musculus GN=Vapb PE=2 SV=3
Length = 243
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 15/135 (11%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L L+P + L F + ++L N + +V FK +TT P+ +RP GV+ G S+
Sbjct: 8 LSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTVPRRYCVRPNSGVIDAGASL 67
Query: 137 IATVFKFVEAPENNERQPLD----QKSKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVER 192
+V QP D +KSK KF + S+ + ++ E K + ++
Sbjct: 68 NVSVM----------LQPFDYDPNEKSKHKFMVQSMFAPPDTSDMEAVWKEAKPEDLMDS 117
Query: 193 ILRVVF-LNAERPSP 206
LR VF L AE P
Sbjct: 118 KLRCVFELPAENAKP 132
>sp|Q8NHP6|MSPD2_HUMAN Motile sperm domain-containing protein 2 OS=Homo sapiens GN=MOSPD2
PE=1 SV=1
Length = 518
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L + P+ LYF + ++ + L N +K+ VAFK +TTAP+ ++P PG S+
Sbjct: 328 LHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGASV 387
Query: 137 IATVFKFVEAPENNERQPLDQKSKDKFKIMSLKVK 171
V +P L ++D+F IM+ +++
Sbjct: 388 -----DIVVSPHGG----LTVSAQDRFLIMAAEME 413
>sp|Q9CWP6|MSPD2_MOUSE Motile sperm domain-containing protein 2 OS=Mus musculus GN=Mospd2
PE=1 SV=2
Length = 518
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L + P+ LYF + ++ + L N +K+ VAFK +TTAP+ ++P PG SI
Sbjct: 328 LHISPAEELYFGSIESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPGASI 387
Query: 137 IATVFKFVEAPENNERQPLDQKSKDKFKIMSLKVK 171
V +P L ++D+F IM+ +++
Sbjct: 388 DIIV-----SPHGG----LTVSAQDRFLIMAAEME 413
>sp|Q16943|VP33_APLCA Vesicle-associated membrane protein/synaptobrevin-binding protein
OS=Aplysia californica PE=2 SV=1
Length = 260
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 21/130 (16%)
Query: 77 LRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSI 136
L L+P+ L F + ++L N + + FK +TTAPK +RP G+L P SI
Sbjct: 8 LILEPAGELRFKGPFTDVVTADLKLSNPTDRRICFKVKTTAPKRYCVRPNSGILEPKTSI 67
Query: 137 IATVFKFVEAPENNERQPL----DQKSKDKFKIMSLKVKGGIDYVPE----LFDEQKDQV 188
V QP ++K+K KF + S+ D+V E L+ + +
Sbjct: 68 AVAVM----------LQPFNYDPNEKNKHKFMVQSMYAP---DHVVESQELLWKDAPPES 114
Query: 189 TVERILRVVF 198
++ LR VF
Sbjct: 115 LMDTKLRCVF 124
>sp|P53022|MSP2_GLORO Major sperm protein 2 OS=Globodera rostochiensis GN=MSP-2 PE=2 SV=2
Length = 126
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 47/130 (36%), Gaps = 39/130 (30%)
Query: 99 VRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVFKFVEAPENNERQPLDQK 158
VR+ N + + F F+TT PK M PP GVL P +S+ +
Sbjct: 31 VRVINPGTNRIGFAFKTTKPKRINMNPPNGVLGPKESVNVAI------------------ 72
Query: 159 SKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVERILRVVFLNAERPSPALEKLKLQLAEA 218
S D F S KG D+VTVE P PA KL+ +
Sbjct: 73 SCDAFDPSSEDTKG-------------DRVTVEW--------CNTPDPAAAAFKLEWFQG 111
Query: 219 EAALEARKRP 228
+ + + P
Sbjct: 112 DGMVRRKNLP 121
>sp|P53021|MSP1_GLORO Major sperm protein 1 OS=Globodera rostochiensis GN=MSP-1 PE=2 SV=2
Length = 126
Score = 40.0 bits (92), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 46/130 (35%), Gaps = 39/130 (30%)
Query: 99 VRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVFKFVEAPENNERQPLDQK 158
VR+ N + F F+TT PK M PP GVL P +S+ +
Sbjct: 31 VRIINPGTKRIGFAFKTTKPKRINMNPPNGVLGPKESVNVAI------------------ 72
Query: 159 SKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVERILRVVFLNAERPSPALEKLKLQLAEA 218
S D F S KG D+VTVE P PA KL+ +
Sbjct: 73 SCDAFDPSSEDTKG-------------DRVTVEW--------CNTPDPAAAAFKLEWFQG 111
Query: 219 EAALEARKRP 228
+ + + P
Sbjct: 112 DGMVRRKNLP 121
>sp|P53023|MSP3_GLORO Major sperm protein 3 OS=Globodera rostochiensis GN=MSP-3 PE=2 SV=2
Length = 126
Score = 40.0 bits (92), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 46/130 (35%), Gaps = 39/130 (30%)
Query: 99 VRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATVFKFVEAPENNERQPLDQK 158
VR+ N + F F+TT PK M PP GVL P +S+ +
Sbjct: 31 VRIINPGTKRIGFAFKTTKPKRINMNPPNGVLGPKESVNVAI------------------ 72
Query: 159 SKDKFKIMSLKVKGGIDYVPELFDEQKDQVTVERILRVVFLNAERPSPALEKLKLQLAEA 218
S D F P D + D+VTVE P PA KL+ +
Sbjct: 73 SCDAFD-------------PSSEDSKGDRVTVEW--------CNTPDPAAAAFKLEWFQG 111
Query: 219 EAALEARKRP 228
+ + + P
Sbjct: 112 DGMVRRKNLP 121
>sp|O60119|YH75_SCHPO Vesicle-associated membrane protein-associated protein C16G5.05c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16G5.05c PE=1 SV=1
Length = 383
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 12/143 (8%)
Query: 77 LRLDPSNNLYFPYEP-GKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDS 135
+ ++ S L+F Y P ++ + + N + V FK +TTAPK +RP G + P +
Sbjct: 1 MSVECSGELFF-YPPFTTMSKELISVHNPNPEPVIFKVKTTAPKHYCVRPNSGKIEPKST 59
Query: 136 IIATVFKFVEAPENNERQPLDQKSKDKFKIMSLKV----KGGIDYVPELFDEQKDQ--VT 189
+ V ++A + E D K +DKF I S+ + ++ E + E + Q
Sbjct: 60 VNVQV--LLQAMK--EEPAPDFKCRDKFLIQSMAIGDADTSNVENYHEFWTEMEKQGRSI 115
Query: 190 VERILRVVFLNAERPSPALEKLK 212
+R +R V+ + P A ++++
Sbjct: 116 FDRKIRCVYSTKQPPQSADKQVE 138
>sp|A4YHA3|GLYA_METS5 Serine hydroxymethyltransferase OS=Metallosphaera sedula (strain
ATCC 51363 / DSM 5348) GN=glyA PE=3 SV=1
Length = 431
Score = 35.0 bits (79), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 55/137 (40%), Gaps = 25/137 (18%)
Query: 114 QTTAPKSCYMRPPGGVLAPGDSIIATVFKFVEAPENNER----QPLDQKSKDKFKIMSLK 169
Q T K C +RP G LA A VF+ + P + Q S KF +
Sbjct: 80 QVTGSKFCDLRPTSGTLAN-----AAVFRVLANPGDKALIAPVQAGAHVSHTKFGTLGAL 134
Query: 170 VKGGIDYVPELFDEQKDQVTVERILRVVFLNAERPSPALEKLKLQLAEAEAALEARKRPP 229
GI+++ +DE+ V V+R ++++ E++K + +L P
Sbjct: 135 ---GIEHIEMPYDEENMNVDVDRAVKMI-----------EQIKPKFVVLGGSLYLFPHPT 180
Query: 230 PDTGPRV--VGEGLVID 244
D P V VG LV D
Sbjct: 181 KDLAPHVHSVGAKLVYD 197
>sp|Q8CBY1|SMAG1_MOUSE Protein Smaug homolog 1 OS=Mus musculus GN=Samd4a PE=1 SV=2
Length = 711
Score = 35.0 bits (79), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 15/95 (15%)
Query: 6 WHSRSNSDKKLFGFCPFWQTSTTATPSSSASSTQNLTTSSSNPHVGV-PNSSRPAT-KTV 63
+H R NSD KL G WQ S + SAS+ Q+ + N HV + +SS PAT T+
Sbjct: 177 YHQRQNSDDKLNG----WQNSRDSGICISASNWQDKSLGCENGHVPLYSSSSVPATINTI 232
Query: 64 SYVARSLL-------PPRRRLRLDPSNNLYFPYEP 91
A ++L P +R + L P N+ P +P
Sbjct: 233 GTGASTILSGQAHHSPLKRSVSLTPPMNV--PNQP 265
>sp|Q21244|MSP63_CAEEL Major sperm protein 63 OS=Caenorhabditis elegans GN=msp-63 PE=2
SV=3
Length = 127
Score = 35.0 bits (79), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 77 LRLDPSNNLYF--PYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGD 134
++ P + F PY+ R +++ N+S + + +TT K + PP GVL P +
Sbjct: 10 IQTQPGTKIVFNAPYDDKHTYR--IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 135 SIIATV----FKFVEAPENNER 152
+++ V F F + NN+R
Sbjct: 68 AVLLAVSCDAFAFGQEDTNNDR 89
>sp|Q9TVW5|MSP77_CAEEL Major sperm protein 77/79 OS=Caenorhabditis elegans GN=msp-77 PE=2
SV=3
Length = 127
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 77 LRLDPSNNLYF--PYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGD 134
++ P + F PY+ K T +++ N+S + + +TT K + PP GVL P +
Sbjct: 10 IQTQPGTKIVFNAPYD-DKHTYH-IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 135 SIIATV----FKFVEAPENNER 152
+++ V F F + NN+R
Sbjct: 68 AVLLAVSCDAFAFGQEDTNNDR 89
>sp|Q23519|MS152_CAEEL Major sperm protein 152 OS=Caenorhabditis elegans GN=msp-152 PE=2
SV=3
Length = 127
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 77 LRLDPSNNLYF--PYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGD 134
++ P + F PY+ K T +++ N+S + + +TT K + PP GVL P +
Sbjct: 10 IQTQPGTKIVFNAPYD-DKHTYH-IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 135 SIIATV----FKFVEAPENNER 152
+++ V F F + NN+R
Sbjct: 68 AVLLAVSCDAFAFGQEDTNNDR 89
>sp|Q94053|MSP78_CAEEL Major sperm protein 78 OS=Caenorhabditis elegans GN=msp-78 PE=2
SV=3
Length = 127
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 77 LRLDPSNNLYF--PYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGD 134
++ P + F PY+ K T +++ N+S + + +TT K + PP GVL P +
Sbjct: 10 IQTQPGTKIVFNAPYD-DKHTYH-IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 135 SIIATV----FKFVEAPENNER 152
+++ V F F + NN+R
Sbjct: 68 AVLLAVSCDAFAFGQEDTNNDR 89
>sp|P53017|MSP19_CAEEL Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142
OS=Caenorhabditis elegans GN=msp-19 PE=1 SV=2
Length = 127
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 77 LRLDPSNNLYF--PYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGD 134
++ P + F PY+ K T +++ N+S + + +TT K + PP GVL P +
Sbjct: 10 IQTQPGTKIVFNAPYD-DKHTYH-IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 135 SIIATV----FKFVEAPENNER 152
+++ V F F + NN+R
Sbjct: 68 AVLLAVSCDAFAFGQEDTNNDR 89
>sp|Q9UTD0|FOLD_SCHPO Probable folylpolyglutamate synthase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=fol3 PE=3 SV=1
Length = 417
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 54/140 (38%), Gaps = 23/140 (16%)
Query: 21 PFWQTSTTATPSSSASSTQNLTTSSSN------------PHV--GVPNSSRPATKTVSYV 66
P W T+T +TP QNL + + PHV GV N+S P + V
Sbjct: 221 PNWGTNTFSTPLKGDYQGQNLACAVTALDILSSSFSIMLPHVQNGVKNTSWPGRLDIRSV 280
Query: 67 ARSLLPPRRRLRLDPSNNLYFPYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPP 126
P + D ++N E K S R N S S V F T + M+
Sbjct: 281 -----PSLGDILFDGAHNKEAAIELAKFVNSQRREHNKSVSWVV-AFTNTKDVTGIMKI- 333
Query: 127 GGVLAPGDSIIATVFKFVEA 146
+L GD++IAT F V
Sbjct: 334 --LLRKGDTVIATNFSSVSG 351
>sp|Q19832|MSP3_CAEEL Major sperm protein 3 OS=Caenorhabditis elegans GN=msp-3 PE=2 SV=3
Length = 127
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 77 LRLDPSNNLYF--PYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGD 134
++ P + F PY+ K T +++ N+S + + +TT K + PP GVL P +
Sbjct: 10 IQTQPGTKIVFNAPYD-DKHTYH-IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 135 SIIATV----FKFVEAPENNER 152
+++ V F F + NN+R
Sbjct: 68 AVLLAVSCDAFAFGQEDTNNDR 89
>sp|P53018|MSP32_CAEEL Major sperm protein 32 OS=Caenorhabditis elegans GN=msp-32 PE=2
SV=1
Length = 190
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 57/143 (39%), Gaps = 14/143 (9%)
Query: 22 FWQTSTTATPSSSASSTQNLTTSSSNPHVGVPNSSRPATKTVSYVARSLLPPRR------ 75
FW + P S ++ G+ + K + R + P+
Sbjct: 12 FWSAAYAEMPISKFTAYAENAVLPKRKMDGISAYADMPKKIFGGICRYAVMPKNSECRTG 71
Query: 76 RLRLDPSNNLYF--PYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPG 133
++ P + F PY+ K T +++ N+S + + +TT K + PP GVL P
Sbjct: 72 MIQTQPGTKIVFNAPYDD-KHTYH-IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPK 129
Query: 134 DSIIATV----FKFVEAPENNER 152
++++ V F F + NN+R
Sbjct: 130 EAVLLAVSCDAFAFGQEDTNNDR 152
>sp|P05634|MSP10_CAEEL Major sperm protein 10/36/56/76 OS=Caenorhabditis elegans GN=msp-10
PE=2 SV=4
Length = 127
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 99 VRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGDSIIATV----FKFVEAPENNER 152
+++ N+S + + +TT K + PP GVL P ++++ V F F + NN+R
Sbjct: 32 IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKEAVLLAVSCDAFAFGQEDTNNDR 89
>sp|Q17856|MSP55_CAEEL Major sperm protein 55/57 OS=Caenorhabditis elegans GN=msp-55 PE=2
SV=3
Length = 127
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 77 LRLDPSNNLYF--PYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGD 134
++ P + F PY+ K T +++ N+S + + +TT K + PP GVL P +
Sbjct: 10 IQTQPGTKIVFNAPYD-DKHTYH-IKVINSSARRIVYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 135 SIIATV----FKFVEAPENNER 152
+++ V F F + NN+R
Sbjct: 68 AVLLAVSCDAFAFGQEDTNNDR 89
>sp|P53019|MSP33_CAEEL Major sperm protein 33 OS=Caenorhabditis elegans GN=msp-33 PE=2
SV=2
Length = 127
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 77 LRLDPSNNLYF--PYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGD 134
++ P + F PY+ K T +++ N+S + + +TT K + PP GVL P +
Sbjct: 10 IQTQPGTKIVFNAPYD-DKHTYH-IKVINSSARRIGYGIKTTNMKRLGVDPPCGVLDPKE 67
Query: 135 SIIATV----FKFVEAPENNER 152
++ V F F + NN+R
Sbjct: 68 AVFLAVSCDAFAFGQEDTNNDR 89
>sp|P53020|MSP38_CAEEL Major sperm protein 38 OS=Caenorhabditis elegans GN=msp-38 PE=2
SV=2
Length = 127
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 77 LRLDPSNNLYF--PYEPGKQTRSAVRLKNTSKSHVAFKFQTTAPKSCYMRPPGGVLAPGD 134
++ P + F PY+ + +++ N+S + + +TT K + PP GV P +
Sbjct: 10 IQTQPGTKIVFNAPYD--DKHTDHIKVINSSARRIGYGIKTTNMKRLGVDPPCGVFDPKE 67
Query: 135 SIIATV----FKFVEAPENNER 152
+++ V F F + NN+R
Sbjct: 68 AVLLAVSCDAFAFGQEDTNNDR 89
>sp|B5DF21|SMAG1_RAT Protein Smaug homolog 1 OS=Rattus norvegicus GN=Samd4a PE=1 SV=1
Length = 610
Score = 31.2 bits (69), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 6 WHSRSNSDKKLFGFCPFWQTSTTATPSSSASSTQNLTTSSSNPHVGV-PNSSRPAT-KTV 63
+H R NS+ KL G WQ S + SAS+ Q+ + N HV + +SS PAT T+
Sbjct: 76 YHQRQNSEDKLNG----WQNSRDSGICISASNWQDKSLGCENGHVPLYSSSSVPATINTI 131
Query: 64 SYVARSLL-------PPRRRLRLDPSNNLYFPYEP 91
++L P +R + L P N+ P +P
Sbjct: 132 GTSTSTILSGQAHHSPLKRSVSLTPPMNV--PNQP 164
>sp|Q9UPU9|SMAG1_HUMAN Protein Smaug homolog 1 OS=Homo sapiens GN=SAMD4A PE=1 SV=3
Length = 718
Score = 30.8 bits (68), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 15/95 (15%)
Query: 6 WHSRSNSDKKLFGFCPFWQTSTTATPSSSASSTQNLTTSSSNPHVGV-PNSSRPAT-KTV 63
+H R NSD KL G WQ S + +AS+ Q+ + N HV + +SS P T T+
Sbjct: 177 YHQRQNSDDKLNG----WQNSRDSGICINASNWQDKSMGCENGHVPLYSSSSVPTTINTI 232
Query: 64 SYVARSLL-------PPRRRLRLDPSNNLYFPYEP 91
++L P +R + L P N+ P +P
Sbjct: 233 GTSTSTILSGQAHHSPLKRSVSLTPPMNV--PNQP 265
>sp|Q95LV5|SMAG1_MACFA Protein Smaug homolog 1 OS=Macaca fascicularis GN=SAMD4A PE=2 SV=2
Length = 718
Score = 30.8 bits (68), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 15/95 (15%)
Query: 6 WHSRSNSDKKLFGFCPFWQTSTTATPSSSASSTQNLTTSSSNPHVGV-PNSSRPAT-KTV 63
+H R NSD KL G WQ S + +AS+ Q+ + N HV + +SS P T T+
Sbjct: 177 YHQRQNSDDKLNG----WQNSRDSGICINASNWQDKSMGCENGHVPLYSSSSVPTTINTI 232
Query: 64 SYVARSLL-------PPRRRLRLDPSNNLYFPYEP 91
++L P +R + L P N+ P +P
Sbjct: 233 GTSTSTILSGQAHHSPLKRSVSLTPPMNV--PNQP 265
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.129 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,485,770
Number of Sequences: 539616
Number of extensions: 4096504
Number of successful extensions: 15053
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 14604
Number of HSP's gapped (non-prelim): 440
length of query: 264
length of database: 191,569,459
effective HSP length: 115
effective length of query: 149
effective length of database: 129,513,619
effective search space: 19297529231
effective search space used: 19297529231
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)